locus-tag class description IOD65_00010 PF00255 Glutathione peroxidase IOD65_00020 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IOD65_00025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IOD65_00025 PF02874 ATP synthase alpha/beta family, beta-barrel domain IOD65_00030 PF00231 ATP synthase IOD65_00035 PF02874 ATP synthase alpha/beta family, beta-barrel domain IOD65_00035 PF00306 ATP synthase alpha/beta chain, C terminal domain IOD65_00035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IOD65_00040 PF00213 ATP synthase delta (OSCP) subunit IOD65_00045 PF00430 ATP synthase B/B' CF(0) IOD65_00050 PF00137 ATP synthase subunit C IOD65_00055 PF00119 ATP synthase A chain IOD65_00075 PF00005 ABC transporter IOD65_00080 PF00950 ABC 3 transport family IOD65_00085 PF01810 LysE type translocator IOD65_00090 PF04261 Dyp-type peroxidase family IOD65_00095 PF03949 Malic enzyme, NAD binding domain IOD65_00095 PF00390 Malic enzyme, N-terminal domain IOD65_00100 PF00750 tRNA synthetases class I (R) IOD65_00100 PF05746 DALR anticodon binding domain IOD65_00100 PF03485 Arginyl tRNA synthetase N terminal domain IOD65_00120 PF02678 Pirin IOD65_00120 PF05726 Pirin C-terminal cupin domain IOD65_00130 PF03551 Transcriptional regulator PadR-like family IOD65_00135 PF02540 NAD synthase IOD65_00135 PF00958 GMP synthase C terminal domain IOD65_00135 PF00117 Glutamine amidotransferase class-I IOD65_00140 PF04286 Protein of unknown function (DUF445) IOD65_00145 PF07681 DoxX IOD65_00150 PF09335 SNARE associated Golgi protein IOD65_00165 PF13614 AAA domain IOD65_00175 PF01722 BolA-like protein IOD65_00190 PF01648 4'-phosphopantetheinyl transferase superfamily IOD65_00195 PF16363 GDP-mannose 4,6 dehydratase IOD65_00210 PF00550 Phosphopantetheine attachment site IOD65_00210 PF00975 Thioesterase domain IOD65_00210 PF00501 AMP-binding enzyme IOD65_00210 PF13193 AMP-binding enzyme C-terminal domain IOD65_00210 PF00668 Condensation domain IOD65_00215 PF16197 Ketoacyl-synthetase C-terminal extension IOD65_00215 PF08242 Methyltransferase domain IOD65_00215 PF00550 Phosphopantetheine attachment site IOD65_00215 PF02801 Beta-ketoacyl synthase, C-terminal domain IOD65_00215 PF00109 Beta-ketoacyl synthase, N-terminal domain IOD65_00215 PF00975 Thioesterase domain IOD65_00215 PF14765 Polyketide synthase dehydratase IOD65_00220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_00220 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_00220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_00225 PF00501 AMP-binding enzyme IOD65_00230 PF03472 Autoinducer binding domain IOD65_00230 PF00196 Bacterial regulatory proteins, luxR family IOD65_00245 PF00392 Bacterial regulatory proteins, gntR family IOD65_00245 PF00155 Aminotransferase class I and II IOD65_00255 PF01266 FAD dependent oxidoreductase IOD65_00260 PF00324 Amino acid permease IOD65_00265 PF00892 EamA-like transporter family IOD65_00270 PF07690 Major Facilitator Superfamily IOD65_00270 PF00083 Sugar (and other) transporter IOD65_00275 PF00378 Enoyl-CoA hydratase/isomerase IOD65_00280 PF00378 Enoyl-CoA hydratase/isomerase IOD65_00285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_00285 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_00285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_00290 PF00501 AMP-binding enzyme IOD65_00290 PF13193 AMP-binding enzyme C-terminal domain IOD65_00295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IOD65_00295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IOD65_00300 PF00171 Aldehyde dehydrogenase family IOD65_00310 PF00324 Amino acid permease IOD65_00315 PF00324 Amino acid permease IOD65_00320 PF01042 Endoribonuclease L-PSP IOD65_00325 PF00842 Alanine racemase, C-terminal domain IOD65_00325 PF01168 Alanine racemase, N-terminal domain IOD65_00330 PF01266 FAD dependent oxidoreductase IOD65_00335 PF01037 Lrp/AsnC ligand binding domain IOD65_00345 PF07715 TonB-dependent Receptor Plug Domain IOD65_00345 PF00593 TonB dependent receptor IOD65_00360 PF00849 RNA pseudouridylate synthase IOD65_00390 PF00665 Integrase core domain IOD65_00390 PF13936 Helix-turn-helix domain IOD65_00405 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IOD65_00405 PF04717 Type VI secretion system, phage-baseplate injector IOD65_00405 PF13296 Putative type VI secretion system Rhs element Vgr IOD65_00410 PF02801 Beta-ketoacyl synthase, C-terminal domain IOD65_00410 PF00109 Beta-ketoacyl synthase, N-terminal domain IOD65_00425 PF00293 NUDIX domain IOD65_00450 PF00694 Aconitase C-terminal domain IOD65_00450 PF00330 Aconitase family (aconitate hydratase) IOD65_00455 PF00285 Citrate synthase, C-terminal domain IOD65_00465 PF00392 Bacterial regulatory proteins, gntR family IOD65_00465 PF07729 FCD domain IOD65_00475 PF00155 Aminotransferase class I and II IOD65_00480 PF09330 D-lactate dehydrogenase, membrane binding IOD65_00480 PF01565 FAD binding domain IOD65_00485 PF01070 FMN-dependent dehydrogenase IOD65_00490 PF00392 Bacterial regulatory proteins, gntR family IOD65_00490 PF07729 FCD domain IOD65_00495 PF02652 L-lactate permease IOD65_00500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IOD65_00500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IOD65_00500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IOD65_00500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IOD65_00505 PF00342 Phosphoglucose isomerase IOD65_00510 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IOD65_00510 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IOD65_00510 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IOD65_00515 PF00483 Nucleotidyl transferase IOD65_00520 PF02397 Bacterial sugar transferase IOD65_00530 PF00535 Glycosyl transferase family 2 IOD65_00540 PF00534 Glycosyl transferases group 1 IOD65_00540 PF13439 Glycosyltransferase Family 4 IOD65_00545 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IOD65_00550 PF00483 Nucleotidyl transferase IOD65_00555 PF04321 RmlD substrate binding domain IOD65_00560 PF16363 GDP-mannose 4,6 dehydratase IOD65_00565 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IOD65_00565 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IOD65_00565 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IOD65_00575 PF00535 Glycosyl transferase family 2 IOD65_00575 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 IOD65_00585 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IOD65_00585 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IOD65_00585 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IOD65_00590 PF02563 Polysaccharide biosynthesis/export protein IOD65_00590 PF10531 SLBB domain IOD65_00590 PF18412 Outer-membrane lipoprotein Wza C-terminal domain IOD65_00595 PF01451 Low molecular weight phosphotyrosine protein phosphatase IOD65_00600 PF13614 AAA domain IOD65_00600 PF13807 G-rich domain on putative tyrosine kinase IOD65_00600 PF02706 Chain length determinant protein IOD65_00605 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IOD65_00605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IOD65_00610 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IOD65_00610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IOD65_00615 PF03023 Lipid II flippase MurJ IOD65_00620 PF01510 N-acetylmuramoyl-L-alanine amidase IOD65_00625 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IOD65_00625 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IOD65_00635 PF05506 Domain of unknown function (DUF756) IOD65_00635 PF04185 Phosphoesterase family IOD65_00640 PF01138 3' exoribonuclease family, domain 1 IOD65_00640 PF03725 3' exoribonuclease family, domain 2 IOD65_00645 PF00487 Fatty acid desaturase IOD65_00650 PF00175 Oxidoreductase NAD-binding domain IOD65_00655 PF00440 Bacterial regulatory proteins, tetR family IOD65_00660 PF08360 QacR-like protein, C-terminal region IOD65_00660 PF00440 Bacterial regulatory proteins, tetR family IOD65_00665 PF01323 DSBA-like thioredoxin domain IOD65_00675 PF13419 Haloacid dehalogenase-like hydrolase IOD65_00680 PF00106 short chain dehydrogenase IOD65_00695 PF00696 Amino acid kinase family IOD65_00695 PF00583 Acetyltransferase (GNAT) family IOD65_00700 PF09084 NMT1/THI5 like IOD65_00705 PF09084 NMT1/THI5 like IOD65_00710 PF00296 Luciferase-like monooxygenase IOD65_00715 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_00720 PF00005 ABC transporter IOD65_00725 PF00440 Bacterial regulatory proteins, tetR family IOD65_00725 PF08362 YcdC-like protein, C-terminal region IOD65_00730 PF01048 Phosphorylase superfamily IOD65_00740 PF06574 FAD synthetase IOD65_00740 PF01687 Riboflavin kinase IOD65_00745 PF06827 Zinc finger found in FPG and IleRS IOD65_00745 PF08264 Anticodon-binding domain of tRNA IOD65_00745 PF00133 tRNA synthetases class I (I, L, M and V) IOD65_00750 PF01252 Signal peptidase (SPase) II IOD65_00755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IOD65_00795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IOD65_00800 PF07859 alpha/beta hydrolase fold IOD65_00825 PF01025 GrpE IOD65_00830 PF00012 Hsp70 protein IOD65_00840 PF00665 Integrase core domain IOD65_00840 PF13936 Helix-turn-helix domain IOD65_00860 PF13406 Transglycosylase SLT domain IOD65_00865 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IOD65_00865 PF02222 ATP-grasp domain IOD65_00870 PF00731 AIR carboxylase IOD65_00880 PF08245 Mur ligase middle domain IOD65_00880 PF02875 Mur ligase family, glutamate ligase domain IOD65_00880 PF01225 Mur ligase family, catalytic domain IOD65_00890 PF01569 PAP2 superfamily IOD65_00895 PF03741 Integral membrane protein TerC family IOD65_00905 PF03738 Glutathionylspermidine synthase preATP-grasp IOD65_00910 PF00355 Rieske [2Fe-2S] domain IOD65_00915 PF01979 Amidohydrolase family IOD65_00920 PF00156 Phosphoribosyl transferase domain IOD65_00930 PF13098 Thioredoxin-like domain IOD65_00930 PF10411 Disulfide bond isomerase protein N-terminus IOD65_00935 PF16916 Dimerisation domain of Zinc Transporter IOD65_00935 PF01545 Cation efflux family IOD65_00940 PF02583 Metal-sensitive transcriptional repressor IOD65_00945 PF12631 MnmE helical domain IOD65_00945 PF10396 GTP-binding protein TrmE N-terminus IOD65_00945 PF01926 50S ribosome-binding GTPase IOD65_00950 PF14849 YidC periplasmic domain IOD65_00950 PF02096 60Kd inner membrane protein IOD65_00955 PF01809 Putative membrane protein insertion efficiency factor IOD65_00960 PF00825 Ribonuclease P IOD65_00965 PF00468 Ribosomal protein L34 IOD65_00970 PF08299 Bacterial dnaA protein helix-turn-helix IOD65_00970 PF11638 DnaA N-terminal domain IOD65_00970 PF00308 Bacterial dnaA protein IOD65_00975 PF00712 DNA polymerase III beta subunit, N-terminal domain IOD65_00975 PF02767 DNA polymerase III beta subunit, central domain IOD65_00975 PF02768 DNA polymerase III beta subunit, C-terminal domain IOD65_00980 PF02463 RecF/RecN/SMC N terminal domain IOD65_00985 PF00204 DNA gyrase B IOD65_00985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_00985 PF00986 DNA gyrase B subunit, carboxyl terminus IOD65_00985 PF18053 DNA gyrase B subunit insert domain IOD65_00985 PF01751 Toprim domain IOD65_01000 PF00005 ABC transporter IOD65_01000 PF12848 ABC transporter IOD65_01020 PF01521 Iron-sulphur cluster biosynthesis IOD65_01025 PF00561 alpha/beta hydrolase fold IOD65_01030 PF03702 Anhydro-N-acetylmuramic acid kinase IOD65_01035 PF00579 tRNA synthetases class I (W and Y) IOD65_01065 PF02798 Glutathione S-transferase, N-terminal domain IOD65_01075 PF00209 Sodium:neurotransmitter symporter family IOD65_01085 PF01029 NusB family IOD65_01085 PF01189 16S rRNA methyltransferase RsmB/F IOD65_01090 PF02911 Formyl transferase, C-terminal domain IOD65_01090 PF00551 Formyl transferase IOD65_01095 PF00920 Dehydratase family IOD65_01110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_01110 PF03466 LysR substrate binding domain IOD65_01115 PF00860 Permease family IOD65_01120 PF00311 Phosphoenolpyruvate carboxylase IOD65_01125 PF08361 MAATS-type transcriptional repressor, C-terminal region IOD65_01125 PF00440 Bacterial regulatory proteins, tetR family IOD65_01130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IOD65_01135 PF00873 AcrB/AcrD/AcrF family IOD65_01145 PF01556 DnaJ C terminal domain IOD65_01145 PF00684 DnaJ central domain IOD65_01145 PF00226 DnaJ domain IOD65_01155 PF05173 Dihydrodipicolinate reductase, C-terminus IOD65_01155 PF01113 Dihydrodipicolinate reductase, N-terminus IOD65_01165 PF07690 Major Facilitator Superfamily IOD65_01170 PF00248 Aldo/keto reductase family IOD65_01175 PF03466 LysR substrate binding domain IOD65_01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_01190 PF00392 Bacterial regulatory proteins, gntR family IOD65_01190 PF00155 Aminotransferase class I and II IOD65_01195 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_01195 PF00107 Zinc-binding dehydrogenase IOD65_01200 PF03352 Methyladenine glycosylase IOD65_01215 PF14815 NUDIX domain IOD65_01215 PF00730 HhH-GPD superfamily base excision DNA repair protein IOD65_01215 PF00633 Helix-hairpin-helix motif IOD65_01215 PF10576 Iron-sulfur binding domain of endonuclease III IOD65_01230 PF07043 Protein of unknown function (DUF1328) IOD65_01235 PF03692 Putative zinc- or iron-chelating domain IOD65_01240 PF07995 Glucose / Sorbosone dehydrogenase IOD65_01245 PF16193 AAA C-terminal domain IOD65_01245 PF12002 MgsA AAA+ ATPase C terminal IOD65_01245 PF00004 ATPase family associated with various cellular activities (AAA) IOD65_01250 PF01226 Formate/nitrite transporter IOD65_01260 PF01259 SAICAR synthetase IOD65_01270 PF00701 Dihydrodipicolinate synthetase family IOD65_01275 PF00857 Isochorismatase family IOD65_01280 PF01758 Sodium Bile acid symporter family IOD65_01285 PF01554 MatE IOD65_01290 PF04463 Protein of unknown function (DUF523) IOD65_01295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IOD65_01305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IOD65_01310 PF02798 Glutathione S-transferase, N-terminal domain IOD65_01310 PF14497 Glutathione S-transferase, C-terminal domain IOD65_01320 PF00324 Amino acid permease IOD65_01330 PF02492 CobW/HypB/UreG, nucleotide-binding domain IOD65_01330 PF07683 Cobalamin synthesis protein cobW C-terminal domain IOD65_01340 PF00392 Bacterial regulatory proteins, gntR family IOD65_01340 PF07702 UTRA domain IOD65_01345 PF05962 HutD IOD65_01350 PF01175 Urocanase Rossmann-like domain IOD65_01350 PF17392 Urocanase C-terminal domain IOD65_01350 PF17391 Urocanase N-terminal domain IOD65_01355 PF00221 Aromatic amino acid lyase IOD65_01360 PF00324 Amino acid permease IOD65_01365 PF01979 Amidohydrolase family IOD65_01370 PF00491 Arginase family IOD65_01390 PF02543 Carbamoyltransferase N-terminus IOD65_01390 PF16861 Carbamoyltransferase C-terminus IOD65_01420 PF00664 ABC transporter transmembrane region IOD65_01420 PF03412 Peptidase C39 family IOD65_01420 PF00005 ABC transporter IOD65_01435 PF13419 Haloacid dehalogenase-like hydrolase IOD65_01440 PF01177 Asp/Glu/Hydantoin racemase IOD65_01450 PF01380 SIS domain IOD65_01455 PF12804 MobA-like NTP transferase domain IOD65_01455 PF14602 Hexapeptide repeat of succinyl-transferase IOD65_01455 PF00132 Bacterial transferase hexapeptide (six repeats) IOD65_01460 PF04608 Phosphatidylglycerophosphatase A IOD65_01465 PF00586 AIR synthase related protein, N-terminal domain IOD65_01465 PF02769 AIR synthase related protein, C-terminal domain IOD65_01470 PF01029 NusB family IOD65_01475 PF00885 6,7-dimethyl-8-ribityllumazine synthase IOD65_01480 PF00925 GTP cyclohydrolase II IOD65_01480 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IOD65_01505 PF02580 D-Tyr-tRNA(Tyr) deacylase IOD65_01510 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IOD65_01510 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IOD65_01515 PF00581 Rhodanese-like domain IOD65_01520 PF02666 Phosphatidylserine decarboxylase IOD65_01525 PF03069 Acetamidase/Formamidase family IOD65_01535 PF01547 Bacterial extracellular solute-binding protein IOD65_01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_01545 PF00512 His Kinase A (phospho-acceptor) domain IOD65_01545 PF00989 PAS fold IOD65_01545 PF11808 Phosphate regulon sensor protein PhoR IOD65_01550 PF00486 Transcriptional regulatory protein, C terminal IOD65_01550 PF00072 Response regulator receiver domain IOD65_01560 PF00106 short chain dehydrogenase IOD65_01565 PF01554 MatE IOD65_01570 PF00155 Aminotransferase class I and II IOD65_01575 PF04286 Protein of unknown function (DUF445) IOD65_01590 PF04262 Glutamate-cysteine ligase IOD65_01595 PF02600 Disulfide bond formation protein DsbB IOD65_01600 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IOD65_01600 PF04717 Type VI secretion system, phage-baseplate injector IOD65_01600 PF13296 Putative type VI secretion system Rhs element Vgr IOD65_01605 PF01476 LysM domain IOD65_01605 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IOD65_01625 PF05728 Uncharacterised protein family (UPF0227) IOD65_01630 PF01751 Toprim domain IOD65_01630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_01630 PF00204 DNA gyrase B IOD65_01630 PF00986 DNA gyrase B subunit, carboxyl terminus IOD65_01635 PF04115 Ureidoglycolate lyase IOD65_01640 PF03561 Allantoicase repeat IOD65_01645 PF01494 FAD binding domain IOD65_01655 PF00860 Permease family IOD65_01660 PF00576 HIUase/Transthyretin family IOD65_01690 PF02683 Cytochrome C biogenesis protein transmembrane region IOD65_01690 PF11412 Disulphide bond corrector protein DsbC IOD65_01695 PF07694 5TMR of 5TMR-LYT IOD65_01695 PF00990 Diguanylate cyclase, GGDEF domain IOD65_01700 PF07859 alpha/beta hydrolase fold IOD65_01710 PF03960 ArsC family IOD65_01715 PF03372 Endonuclease/Exonuclease/phosphatase family IOD65_01720 PF00156 Phosphoribosyl transferase domain IOD65_01730 PF00593 TonB dependent receptor IOD65_01730 PF07715 TonB-dependent Receptor Plug Domain IOD65_01740 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IOD65_01740 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IOD65_01745 PF04101 Glycosyltransferase family 28 C-terminal domain IOD65_01745 PF03033 Glycosyltransferase family 28 N-terminal domain IOD65_01750 PF02875 Mur ligase family, glutamate ligase domain IOD65_01750 PF08245 Mur ligase middle domain IOD65_01750 PF01225 Mur ligase family, catalytic domain IOD65_01755 PF07478 D-ala D-ala ligase C-terminus IOD65_01755 PF01820 D-ala D-ala ligase N-terminus IOD65_01760 PF08478 POTRA domain, FtsQ-type IOD65_01760 PF03799 Cell division protein FtsQ IOD65_01765 PF02491 SHS2 domain inserted in FTSA IOD65_01770 PF12327 FtsZ family, C-terminal domain IOD65_01770 PF00091 Tubulin/FtsZ family, GTPase domain IOD65_01775 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IOD65_01785 PF01551 Peptidase family M23 IOD65_01790 PF00456 Transketolase, thiamine diphosphate binding domain IOD65_01790 PF17831 Pyruvate dehydrogenase E1 component middle domain IOD65_01795 PF00364 Biotin-requiring enzyme IOD65_01795 PF02817 e3 binding domain IOD65_01795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IOD65_01805 PF01169 Uncharacterized protein family UPF0016 IOD65_01810 PF00593 TonB dependent receptor IOD65_01810 PF07715 TonB-dependent Receptor Plug Domain IOD65_01815 PF01613 Flavin reductase like domain IOD65_01815 PF00258 Flavodoxin IOD65_01820 PF00478 IMP dehydrogenase / GMP reductase domain IOD65_01820 PF00571 CBS domain IOD65_01825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IOD65_01825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IOD65_01825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IOD65_01825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IOD65_01830 PF01243 Pyridoxamine 5'-phosphate oxidase IOD65_01830 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IOD65_01835 PF02272 DHHA1 domain IOD65_01835 PF01368 DHH family IOD65_01835 PF17768 RecJ OB domain IOD65_01855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IOD65_01860 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IOD65_01865 PF04452 RNA methyltransferase IOD65_01870 PF00924 Mechanosensitive ion channel IOD65_01870 PF05552 Conserved TM helix IOD65_01880 PF13193 AMP-binding enzyme C-terminal domain IOD65_01880 PF16177 Acetyl-coenzyme A synthetase N-terminus IOD65_01880 PF00501 AMP-binding enzyme IOD65_01885 PF00857 Isochorismatase family IOD65_01890 PF01037 Lrp/AsnC ligand binding domain IOD65_01895 PF00296 Luciferase-like monooxygenase IOD65_01900 PF03358 NADPH-dependent FMN reductase IOD65_01905 PF00072 Response regulator receiver domain IOD65_01905 PF00196 Bacterial regulatory proteins, luxR family IOD65_01915 PF00072 Response regulator receiver domain IOD65_01915 PF01627 Hpt domain IOD65_01915 PF00672 HAMP domain IOD65_01915 PF00512 His Kinase A (phospho-acceptor) domain IOD65_01915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_01920 PF04341 Protein of unknown function, DUF485 IOD65_01925 PF00474 Sodium:solute symporter family IOD65_01935 PF02028 BCCT, betaine/carnitine/choline family transporter IOD65_01945 PF00990 Diguanylate cyclase, GGDEF domain IOD65_01950 PF17760 UvrA interaction domain IOD65_01950 PF17755 UvrA DNA-binding domain IOD65_01955 PF00440 Bacterial regulatory proteins, tetR family IOD65_01955 PF16925 Tetracyclin repressor-like, C-terminal domain IOD65_01960 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_01960 PF00107 Zinc-binding dehydrogenase IOD65_01970 PF06942 GlpM protein IOD65_01975 PF00106 short chain dehydrogenase IOD65_01980 PF09278 MerR, DNA binding IOD65_01980 PF00376 MerR family regulatory protein IOD65_01985 PF03070 TENA/THI-4/PQQC family IOD65_01985 PF08543 Phosphomethylpyrimidine kinase IOD65_01985 PF02581 Thiamine monophosphate synthase IOD65_01995 PF07690 Major Facilitator Superfamily IOD65_02000 PF00436 Single-strand binding protein family IOD65_02010 PF03591 AzlC protein IOD65_02020 PF00324 Amino acid permease IOD65_02025 PF00155 Aminotransferase class I and II IOD65_02025 PF00392 Bacterial regulatory proteins, gntR family IOD65_02030 PF00202 Aminotransferase class-III IOD65_02035 PF00171 Aldehyde dehydrogenase family IOD65_02040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_02045 PF00857 Isochorismatase family IOD65_02050 PF05726 Pirin C-terminal cupin domain IOD65_02050 PF02678 Pirin IOD65_02055 PF01593 Flavin containing amine oxidoreductase IOD65_02075 PF07690 Major Facilitator Superfamily IOD65_02080 PF03466 LysR substrate binding domain IOD65_02080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_02100 PF00248 Aldo/keto reductase family IOD65_02105 PF12833 Helix-turn-helix domain IOD65_02105 PF02311 AraC-like ligand binding domain IOD65_02120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IOD65_02135 PF01638 HxlR-like helix-turn-helix IOD65_02140 PF02525 Flavodoxin-like fold IOD65_02170 PF02705 K+ potassium transporter IOD65_02200 PF00230 Major intrinsic protein IOD65_02215 PF00977 Histidine biosynthesis protein IOD65_02220 PF01636 Phosphotransferase enzyme family IOD65_02235 PF03992 Antibiotic biosynthesis monooxygenase IOD65_02240 PF00892 EamA-like transporter family IOD65_02250 PF00977 Histidine biosynthesis protein IOD65_02255 PF00570 HRDC domain IOD65_02255 PF01612 3'-5' exonuclease IOD65_02265 PF00117 Glutamine amidotransferase class-I IOD65_02270 PF00475 Imidazoleglycerol-phosphate dehydratase IOD65_02290 PF00583 Acetyltransferase (GNAT) family IOD65_02295 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IOD65_02295 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IOD65_02305 PF00512 His Kinase A (phospho-acceptor) domain IOD65_02305 PF00672 HAMP domain IOD65_02305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_02310 PF00486 Transcriptional regulatory protein, C terminal IOD65_02310 PF00072 Response regulator receiver domain IOD65_02315 PF17674 HHH domain IOD65_02315 PF09371 Tex-like protein N-terminal domain IOD65_02315 PF16921 Tex protein YqgF-like domain IOD65_02315 PF00575 S1 RNA binding domain IOD65_02320 PF01740 STAS domain IOD65_02320 PF00916 Sulfate permease family IOD65_02325 PF00106 short chain dehydrogenase IOD65_02330 PF01053 Cys/Met metabolism PLP-dependent enzyme IOD65_02335 PF00005 ABC transporter IOD65_02335 PF12848 ABC transporter IOD65_02355 PF04191 Phospholipid methyltransferase IOD65_02375 PF00529 HlyD membrane-fusion protein of T1SS IOD65_02375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IOD65_02380 PF00873 AcrB/AcrD/AcrF family IOD65_02385 PF01545 Cation efflux family IOD65_02415 PF00324 Amino acid permease IOD65_02430 PF00749 tRNA synthetases class I (E and Q), catalytic domain IOD65_02445 PF01795 MraW methylase family IOD65_02455 PF03717 Penicillin-binding Protein dimerisation domain IOD65_02455 PF00905 Penicillin binding protein transpeptidase domain IOD65_02460 PF01225 Mur ligase family, catalytic domain IOD65_02460 PF02875 Mur ligase family, glutamate ligase domain IOD65_02460 PF08245 Mur ligase middle domain IOD65_02465 PF01225 Mur ligase family, catalytic domain IOD65_02465 PF08245 Mur ligase middle domain IOD65_02465 PF02875 Mur ligase family, glutamate ligase domain IOD65_02470 PF00953 Glycosyl transferase family 4 IOD65_02480 PF13847 Methyltransferase domain IOD65_02485 PF00905 Penicillin binding protein transpeptidase domain IOD65_02485 PF00912 Transglycosylase IOD65_02485 PF17092 Penicillin-binding protein OB-like domain IOD65_02490 PF11104 Type IV pilus assembly protein PilM; IOD65_02495 PF05137 Fimbrial assembly protein (PilN) IOD65_02500 PF04350 Pilus assembly protein, PilO IOD65_02510 PF11741 AMIN domain IOD65_02510 PF07660 Secretin and TonB N terminus short domain IOD65_02510 PF00263 Bacterial type II and III secretion system protein IOD65_02510 PF03958 Bacterial type II/III secretion system short domain IOD65_02515 PF01202 Shikimate kinase IOD65_02520 PF01761 3-dehydroquinate synthase IOD65_02530 PF04898 Glutamate synthase central domain IOD65_02530 PF01493 GXGXG motif IOD65_02530 PF01645 Conserved region in glutamate synthase IOD65_02530 PF00310 Glutamine amidotransferases class-II IOD65_02535 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_02535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IOD65_02545 PF04011 LemA family IOD65_02550 PF04536 TPM domain IOD65_02560 PF07963 Prokaryotic N-terminal methylation motif IOD65_02560 PF00114 Pilin (bacterial filament) IOD65_02570 PF15864 Protein glycosylation ligase IOD65_02570 PF04932 O-Antigen ligase IOD65_02570 PF11846 Virulence factor membrane-bound polymerase, C-terminal IOD65_02575 PF00210 Ferritin-like domain IOD65_02580 PF04324 BFD-like [2Fe-2S] binding domain IOD65_02590 PF01042 Endoribonuclease L-PSP IOD65_02595 PF02824 TGS domain IOD65_02595 PF04607 Region found in RelA / SpoT proteins IOD65_02595 PF13291 ACT domain IOD65_02605 PF01192 RNA polymerase Rpb6 IOD65_02610 PF00625 Guanylate kinase IOD65_02615 PF02401 LytB protein IOD65_02655 PF00886 Ribosomal protein S16 IOD65_02660 PF01782 RimM N-terminal domain IOD65_02660 PF05239 PRC-barrel domain IOD65_02665 PF01746 tRNA (Guanine-1)-methyltransferase IOD65_02670 PF01245 Ribosomal protein L19 IOD65_02675 PF00561 alpha/beta hydrolase fold IOD65_02680 PF03280 Proteobacterial lipase chaperone protein IOD65_02685 PF01509 TruB family pseudouridylate synthase (N terminal domain) IOD65_02685 PF16198 tRNA pseudouridylate synthase B C-terminal domain IOD65_02685 PF09157 Pseudouridine synthase II TruB, C-terminal IOD65_02690 PF01925 Sulfite exporter TauE/SafE IOD65_02700 PF00892 EamA-like transporter family IOD65_02705 PF00892 EamA-like transporter family IOD65_02710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IOD65_02710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IOD65_02715 PF01565 FAD binding domain IOD65_02715 PF02913 FAD linked oxidases, C-terminal domain IOD65_02725 PF03992 Antibiotic biosynthesis monooxygenase IOD65_02730 PF02525 Flavodoxin-like fold IOD65_02740 PF07690 Major Facilitator Superfamily IOD65_02745 PF12805 FUSC-like inner membrane protein yccS IOD65_02750 PF00080 Copper/zinc superoxide dismutase (SODC) IOD65_02755 PF01594 AI-2E family transporter IOD65_02760 PF13614 AAA domain IOD65_02780 PF08241 Methyltransferase domain IOD65_02790 PF00324 Amino acid permease IOD65_02795 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IOD65_02795 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IOD65_02800 PF00202 Aminotransferase class-III IOD65_02805 PF04958 Arginine N-succinyltransferase beta subunit IOD65_02810 PF00171 Aldehyde dehydrogenase family IOD65_02815 PF04996 Succinylarginine dihydrolase IOD65_02820 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IOD65_02835 PF00082 Subtilase family IOD65_02835 PF05922 Peptidase inhibitor I9 IOD65_02850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_02850 PF03466 LysR substrate binding domain IOD65_02855 PF00892 EamA-like transporter family IOD65_02870 PF05746 DALR anticodon binding domain IOD65_02870 PF02092 Glycyl-tRNA synthetase beta subunit IOD65_02875 PF02091 Glycyl-tRNA synthetase alpha subunit IOD65_02900 PF00571 CBS domain IOD65_02905 PF04024 PspC domain IOD65_02915 PF12806 Acetyl-CoA dehydrogenase C-terminal like IOD65_02915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_02915 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_02915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_02925 PF01488 Shikimate / quinate 5-dehydrogenase IOD65_02925 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IOD65_02925 PF08501 Shikimate dehydrogenase substrate binding domain IOD65_02930 PF01218 Coproporphyrinogen III oxidase IOD65_02935 PF00925 GTP cyclohydrolase II IOD65_02940 PF02779 Transketolase, pyrimidine binding domain IOD65_02940 PF02780 Transketolase, C-terminal domain IOD65_02940 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IOD65_02945 PF00459 Inositol monophosphatase family IOD65_02950 PF00271 Helicase conserved C-terminal domain IOD65_02950 PF12343 Cold shock protein DEAD box A IOD65_02950 PF00270 DEAD/DEAH box helicase IOD65_02950 PF03880 DbpA RNA binding domain IOD65_02960 PF00005 ABC transporter IOD65_02965 PF02405 Permease MlaE IOD65_02975 PF05494 MlaC protein IOD65_02985 PF01544 CorA-like Mg2+ transporter protein IOD65_02990 PF03641 Possible lysine decarboxylase IOD65_02995 PF00293 NUDIX domain IOD65_03000 PF00156 Phosphoribosyl transferase domain IOD65_03005 PF17191 RecG wedge domain IOD65_03005 PF00271 Helicase conserved C-terminal domain IOD65_03005 PF00270 DEAD/DEAH box helicase IOD65_03020 PF01553 Acyltransferase IOD65_03030 PF00375 Sodium:dicarboxylate symporter family IOD65_03040 PF01926 50S ribosome-binding GTPase IOD65_03045 PF02082 Transcriptional regulator IOD65_03050 PF00970 Oxidoreductase FAD-binding domain IOD65_03050 PF00175 Oxidoreductase NAD-binding domain IOD65_03050 PF00042 Globin IOD65_03060 PF05872 Bacterial protein of unknown function (DUF853) IOD65_03065 PF01053 Cys/Met metabolism PLP-dependent enzyme IOD65_03070 PF00117 Glutamine amidotransferase class-I IOD65_03075 PF00338 Ribosomal protein S10p/S20e IOD65_03080 PF00297 Ribosomal protein L3 IOD65_03085 PF00573 Ribosomal protein L4/L1 family IOD65_03090 PF00276 Ribosomal protein L23 IOD65_03095 PF00181 Ribosomal Proteins L2, RNA binding domain IOD65_03095 PF03947 Ribosomal Proteins L2, C-terminal domain IOD65_03100 PF00203 Ribosomal protein S19 IOD65_03105 PF00237 Ribosomal protein L22p/L17e IOD65_03110 PF07650 KH domain IOD65_03110 PF00189 Ribosomal protein S3, C-terminal domain IOD65_03115 PF00252 Ribosomal protein L16p/L10e IOD65_03120 PF00831 Ribosomal L29 protein IOD65_03125 PF00366 Ribosomal protein S17 IOD65_03130 PF00238 Ribosomal protein L14p/L23e IOD65_03135 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IOD65_03135 PF00467 KOW motif IOD65_03140 PF00281 Ribosomal protein L5 IOD65_03140 PF00673 ribosomal L5P family C-terminus IOD65_03145 PF00253 Ribosomal protein S14p/S29e IOD65_03150 PF00410 Ribosomal protein S8 IOD65_03155 PF00347 Ribosomal protein L6 IOD65_03160 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IOD65_03165 PF03719 Ribosomal protein S5, C-terminal domain IOD65_03165 PF00333 Ribosomal protein S5, N-terminal domain IOD65_03170 PF00327 Ribosomal protein L30p/L7e IOD65_03175 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IOD65_03180 PF00344 SecY translocase IOD65_03185 PF00444 Ribosomal protein L36 IOD65_03190 PF00416 Ribosomal protein S13/S18 IOD65_03195 PF00411 Ribosomal protein S11 IOD65_03200 PF00163 Ribosomal protein S4/S9 N-terminal domain IOD65_03200 PF01479 S4 domain IOD65_03205 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IOD65_03205 PF01000 RNA polymerase Rpb3/RpoA insert domain IOD65_03205 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IOD65_03210 PF01196 Ribosomal protein L17 IOD65_03215 PF00743 Flavin-binding monooxygenase-like IOD65_03220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_03220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_03220 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_03225 PF03937 Flavinator of succinate dehydrogenase IOD65_03255 PF09526 Probable metal-binding protein (DUF2387) IOD65_03260 PF01432 Peptidase family M3 IOD65_03265 PF00575 S1 RNA binding domain IOD65_03265 PF00773 RNB domain IOD65_03265 PF08206 Ribonuclease B OB domain IOD65_03265 PF08461 Ribonuclease R winged-helix domain IOD65_03265 PF17876 Cold shock domain IOD65_03315 PF01557 Fumarylacetoacetate (FAA) hydrolase family IOD65_03320 PF03631 Virulence factor BrkB IOD65_03325 PF03358 NADPH-dependent FMN reductase IOD65_03350 PF02130 Uncharacterized protein family UPF0054 IOD65_03355 PF02562 PhoH-like protein IOD65_03360 PF01938 TRAM domain IOD65_03360 PF00919 Uncharacterized protein family UPF0004 IOD65_03360 PF04055 Radical SAM superfamily IOD65_03365 PF01551 Peptidase family M23 IOD65_03365 PF10145 Phage-related minor tail protein IOD65_03365 PF01464 Transglycosylase SLT domain IOD65_03375 PF00056 lactate/malate dehydrogenase, NAD binding domain IOD65_03375 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IOD65_03395 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IOD65_03400 PF01066 CDP-alcohol phosphatidyltransferase IOD65_03445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_03445 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_03445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_03450 PF00440 Bacterial regulatory proteins, tetR family IOD65_03450 PF17932 Tetracyclin repressor-like, C-terminal domain IOD65_03465 PF01039 Carboxyl transferase domain IOD65_03470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_03470 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_03470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_03480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IOD65_03480 PF00289 Biotin carboxylase, N-terminal domain IOD65_03480 PF00364 Biotin-requiring enzyme IOD65_03480 PF02785 Biotin carboxylase C-terminal domain IOD65_03510 PF04386 Stringent starvation protein B IOD65_03515 PF00043 Glutathione S-transferase, C-terminal domain IOD65_03515 PF13417 Glutathione S-transferase, N-terminal domain IOD65_03520 PF00380 Ribosomal protein S9/S16 IOD65_03525 PF00572 Ribosomal protein L13 IOD65_03530 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IOD65_03535 PF00398 Ribosomal RNA adenine dimethylase IOD65_03540 PF00149 Calcineurin-like phosphoesterase IOD65_03560 PF13167 GTP-binding GTPase N-terminal IOD65_03560 PF01926 50S ribosome-binding GTPase IOD65_03560 PF16360 GTP-binding GTPase Middle Region IOD65_03570 PF13091 PLD-like domain IOD65_03575 PF00149 Calcineurin-like phosphoesterase IOD65_03575 PF10518 TAT (twin-arginine translocation) pathway signal sequence IOD65_03580 PF00691 OmpA family IOD65_03580 PF01389 OmpA-like transmembrane domain IOD65_03585 PF17152 Periplasmic sensor domain IOD65_03585 PF00990 Diguanylate cyclase, GGDEF domain IOD65_03590 PF13689 YfiR/HmsC-like IOD65_03630 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_03630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IOD65_03640 PF00753 Metallo-beta-lactamase superfamily IOD65_03640 PF04273 Putative phosphatase (DUF442) IOD65_03645 PF00561 alpha/beta hydrolase fold IOD65_03650 PF00085 Thioredoxin IOD65_03655 PF03061 Thioesterase superfamily IOD65_03670 PF04461 Protein of unknown function (DUF520) IOD65_03680 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IOD65_03680 PF01266 FAD dependent oxidoreductase IOD65_03690 PF03795 YCII-related domain IOD65_03695 PF04279 Intracellular septation protein A IOD65_03705 PF01062 Bestrophin, RFP-TM, chloride channel IOD65_03710 PF04002 RadC-like JAB domain IOD65_03715 PF04127 DNA / pantothenate metabolism flavoprotein IOD65_03715 PF02441 Flavoprotein IOD65_03720 PF07549 SecD/SecF GG Motif IOD65_03720 PF02355 Protein export membrane protein IOD65_03725 PF02355 Protein export membrane protein IOD65_03725 PF07549 SecD/SecF GG Motif IOD65_03725 PF13721 SecD export protein N-terminal TM region IOD65_03730 PF02699 Preprotein translocase subunit IOD65_03735 PF01702 Queuine tRNA-ribosyltransferase IOD65_03755 PF02547 Queuosine biosynthesis protein IOD65_03775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_03775 PF00672 HAMP domain IOD65_03775 PF00512 His Kinase A (phospho-acceptor) domain IOD65_03775 PF00072 Response regulator receiver domain IOD65_03775 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IOD65_03775 PF01627 Hpt domain IOD65_03780 PF08335 GlnD PII-uridylyltransferase IOD65_03780 PF03710 Glutamate-ammonia ligase adenylyltransferase IOD65_03785 PF01063 Amino-transferase class IV IOD65_03795 PF01522 Polysaccharide deacetylase IOD65_03810 PF00535 Glycosyl transferase family 2 IOD65_03825 PF00152 tRNA synthetases class II (D, K and N) IOD65_03825 PF02938 GAD domain IOD65_03825 PF01336 OB-fold nucleic acid binding domain IOD65_03835 PF07715 TonB-dependent Receptor Plug Domain IOD65_03835 PF00593 TonB dependent receptor IOD65_03855 PF06146 Phosphate-starvation-inducible E IOD65_03860 PF02798 Glutathione S-transferase, N-terminal domain IOD65_03860 PF00043 Glutathione S-transferase, C-terminal domain IOD65_03865 PF03466 LysR substrate binding domain IOD65_03865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_03870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_03870 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_03870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_03870 PF12806 Acetyl-CoA dehydrogenase C-terminal like IOD65_03875 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_03875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_03875 PF12806 Acetyl-CoA dehydrogenase C-terminal like IOD65_03875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_03885 PF00512 His Kinase A (phospho-acceptor) domain IOD65_03885 PF00672 HAMP domain IOD65_03885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_03890 PF00486 Transcriptional regulatory protein, C terminal IOD65_03890 PF00072 Response regulator receiver domain IOD65_03900 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IOD65_03920 PF01923 Cobalamin adenosyltransferase IOD65_03925 PF07715 TonB-dependent Receptor Plug Domain IOD65_03925 PF00593 TonB dependent receptor IOD65_03930 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IOD65_03935 PF00291 Pyridoxal-phosphate dependent enzyme IOD65_03960 PF00290 Tryptophan synthase alpha chain IOD65_03965 PF01039 Carboxyl transferase domain IOD65_03970 PF02875 Mur ligase family, glutamate ligase domain IOD65_03970 PF08245 Mur ligase middle domain IOD65_03985 PF00753 Metallo-beta-lactamase superfamily IOD65_03990 PF10417 C-terminal domain of 1-Cys peroxiredoxin IOD65_03990 PF00578 AhpC/TSA family IOD65_03995 PF02810 SEC-C motif IOD65_03995 PF07517 SecA DEAD-like domain IOD65_03995 PF01043 SecA preprotein cross-linking domain IOD65_03995 PF07516 SecA Wing and Scaffold domain IOD65_04005 PF00083 Sugar (and other) transporter IOD65_04005 PF07690 Major Facilitator Superfamily IOD65_04010 PF03006 Haemolysin-III related IOD65_04020 PF13673 Acetyltransferase (GNAT) domain IOD65_04035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IOD65_04035 PF00378 Enoyl-CoA hydratase/isomerase IOD65_04035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IOD65_04040 PF02803 Thiolase, C-terminal domain IOD65_04040 PF00108 Thiolase, N-terminal domain IOD65_04045 PF12833 Helix-turn-helix domain IOD65_04045 PF02311 AraC-like ligand binding domain IOD65_04050 PF02515 CoA-transferase family III IOD65_04055 PF04966 Carbohydrate-selective porin, OprB family IOD65_04060 PF01011 PQQ enzyme repeat IOD65_04065 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IOD65_04065 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IOD65_04075 PF00893 Small Multidrug Resistance protein IOD65_04085 PF02803 Thiolase, C-terminal domain IOD65_04085 PF00108 Thiolase, N-terminal domain IOD65_04090 PF07963 Prokaryotic N-terminal methylation motif IOD65_04090 PF00114 Pilin (bacterial filament) IOD65_04095 PF13505 Outer membrane protein beta-barrel domain IOD65_04095 PF00691 OmpA family IOD65_04105 PF01139 tRNA-splicing ligase RtcB IOD65_04110 PF00324 Amino acid permease IOD65_04115 PF08468 Methyltransferase small domain N-terminal IOD65_04115 PF05175 Methyltransferase small domain IOD65_04120 PF00860 Permease family IOD65_04125 PF00009 Elongation factor Tu GTP binding domain IOD65_04125 PF03144 Elongation factor Tu domain 2 IOD65_04125 PF00679 Elongation factor G C-terminus IOD65_04130 PF01741 Large-conductance mechanosensitive channel, MscL IOD65_04145 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IOD65_04145 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IOD65_04145 PF06827 Zinc finger found in FPG and IleRS IOD65_04150 PF02245 Methylpurine-DNA glycosylase (MPG) IOD65_04155 PF00593 TonB dependent receptor IOD65_04155 PF07715 TonB-dependent Receptor Plug Domain IOD65_04160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IOD65_04175 PF13098 Thioredoxin-like domain IOD65_04175 PF10411 Disulfide bond isomerase protein N-terminus IOD65_04180 PF01571 Aminomethyltransferase folate-binding domain IOD65_04195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IOD65_04195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IOD65_04200 PF00860 Permease family IOD65_04205 PF01613 Flavin reductase like domain IOD65_04210 PF01042 Endoribonuclease L-PSP IOD65_04215 PF00857 Isochorismatase family IOD65_04220 PF00296 Luciferase-like monooxygenase IOD65_04225 PF00881 Nitroreductase family IOD65_04230 PF12697 Alpha/beta hydrolase family IOD65_04235 PF04343 Protein of unknown function, DUF488 IOD65_04240 PF03831 PhnA domain IOD65_04240 PF08274 PhnA Zinc-Ribbon IOD65_04245 PF07411 Domain of unknown function (DUF1508) IOD65_04250 PF03129 Anticodon binding domain IOD65_04250 PF04073 Aminoacyl-tRNA editing domain IOD65_04250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IOD65_04255 PF00873 AcrB/AcrD/AcrF family IOD65_04270 PF00072 Response regulator receiver domain IOD65_04275 PF00072 Response regulator receiver domain IOD65_04280 PF01584 CheW-like domain IOD65_04285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IOD65_04285 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IOD65_04290 PF01584 CheW-like domain IOD65_04290 PF00072 Response regulator receiver domain IOD65_04290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_04290 PF01627 Hpt domain IOD65_04310 PF13936 Helix-turn-helix domain IOD65_04310 PF00665 Integrase core domain IOD65_04315 PF13936 Helix-turn-helix domain IOD65_04315 PF00665 Integrase core domain IOD65_04325 PF01546 Peptidase family M20/M25/M40 IOD65_04325 PF07687 Peptidase dimerisation domain IOD65_04330 PF08085 Entericidin EcnA/B family IOD65_04340 PF04304 Protein of unknown function (DUF454) IOD65_04345 PF17969 L,D-transpeptidase C-terminal domain IOD65_04345 PF03734 L,D-transpeptidase catalytic domain IOD65_04385 PF00258 Flavodoxin IOD65_04385 PF00667 FAD binding domain IOD65_04385 PF00175 Oxidoreductase NAD-binding domain IOD65_04395 PF12805 FUSC-like inner membrane protein yccS IOD65_04400 PF07690 Major Facilitator Superfamily IOD65_04405 PF00881 Nitroreductase family IOD65_04420 PF01235 Sodium:alanine symporter family IOD65_04425 PF01734 Patatin-like phospholipase IOD65_04430 PF13291 ACT domain IOD65_04430 PF00291 Pyridoxal-phosphate dependent enzyme IOD65_04435 PF05992 SbmA/BacA-like family IOD65_04440 PF05649 Peptidase family M13 IOD65_04440 PF01431 Peptidase family M13 IOD65_04465 PF02637 GatB domain IOD65_04465 PF02934 GatB/GatE catalytic domain IOD65_04470 PF01425 Amidase IOD65_04475 PF02686 Glu-tRNAGln amidotransferase C subunit IOD65_04485 PF04085 rod shape-determining protein MreC IOD65_04490 PF04093 rod shape-determining protein MreD IOD65_04495 PF02545 Maf-like protein IOD65_04500 PF00575 S1 RNA binding domain IOD65_04500 PF10150 Ribonuclease E/G family IOD65_04510 PF06974 Protein of unknown function (DUF1298) IOD65_04510 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain IOD65_04515 PF01507 Phosphoadenosine phosphosulfate reductase family IOD65_04530 PF02525 Flavodoxin-like fold IOD65_04550 PF02673 Bacitracin resistance protein BacA IOD65_04555 PF12833 Helix-turn-helix domain IOD65_04555 PF06719 AraC-type transcriptional regulator N-terminus IOD65_04560 PF09277 Erythronolide synthase, docking IOD65_04560 PF14765 Polyketide synthase dehydratase IOD65_04560 PF00550 Phosphopantetheine attachment site IOD65_04560 PF00698 Acyl transferase domain IOD65_04560 PF00109 Beta-ketoacyl synthase, N-terminal domain IOD65_04560 PF02801 Beta-ketoacyl synthase, C-terminal domain IOD65_04560 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_04560 PF08659 KR domain IOD65_04560 PF16197 Ketoacyl-synthetase C-terminal extension IOD65_04560 PF08990 Erythronolide synthase docking IOD65_04565 PF01965 DJ-1/PfpI family IOD65_04575 PF00004 ATPase family associated with various cellular activities (AAA) IOD65_04625 PF03796 DnaB-like helicase C terminal domain IOD65_04625 PF00772 DnaB-like helicase N terminal domain IOD65_04660 PF13356 Arm DNA-binding domain IOD65_04660 PF00589 Phage integrase family IOD65_04680 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IOD65_04685 PF09297 NADH pyrophosphatase zinc ribbon domain IOD65_04685 PF00293 NUDIX domain IOD65_04690 PF00324 Amino acid permease IOD65_04695 PF04303 PrpF protein IOD65_04700 PF00348 Polyprenyl synthetase IOD65_04705 PF04237 YjbR IOD65_04710 PF01145 SPFH domain / Band 7 family IOD65_04720 PF01734 Patatin-like phospholipase IOD65_04745 PF00884 Sulfatase IOD65_04745 PF08019 Phosphoethanolamine transferase EptA/EptB IOD65_04750 PF00486 Transcriptional regulatory protein, C terminal IOD65_04750 PF00072 Response regulator receiver domain IOD65_04755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_04755 PF00512 His Kinase A (phospho-acceptor) domain IOD65_04755 PF08521 Two-component sensor kinase N-terminal IOD65_04765 PF00909 Ammonium Transporter Family IOD65_04770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_04770 PF03466 LysR substrate binding domain IOD65_04790 PF13737 Transposase DDE domain IOD65_04800 PF08264 Anticodon-binding domain of tRNA IOD65_04800 PF00133 tRNA synthetases class I (I, L, M and V) IOD65_04800 PF10458 Valyl tRNA synthetase tRNA binding arm IOD65_04820 PF01906 Putative heavy-metal-binding IOD65_04825 PF01906 Putative heavy-metal-binding IOD65_04830 PF02321 Outer membrane efflux protein IOD65_04835 PF00873 AcrB/AcrD/AcrF family IOD65_04840 PF00529 HlyD membrane-fusion protein of T1SS IOD65_04840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IOD65_04845 PF01569 PAP2 superfamily IOD65_04855 PF00348 Polyprenyl synthetase IOD65_04860 PF00829 Ribosomal prokaryotic L21 protein IOD65_04865 PF01016 Ribosomal L27 protein IOD65_04870 PF03548 Outer membrane lipoprotein carrier protein LolA IOD65_04880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IOD65_04880 PF02403 Seryl-tRNA synthetase N-terminal domain IOD65_04885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IOD65_04885 PF10414 Sirohaem synthase dimerisation region IOD65_04885 PF14824 Sirohaem biosynthesis protein central IOD65_04890 PF00588 SpoU rRNA Methylase family IOD65_04920 PF03358 NADPH-dependent FMN reductase IOD65_04925 PF13520 Amino acid permease IOD65_04930 PF00465 Iron-containing alcohol dehydrogenase IOD65_04940 PF03099 Biotin/lipoate A/B protein ligase family IOD65_04945 PF04359 Protein of unknown function (DUF493) IOD65_04950 PF04542 Sigma-70 region 2 IOD65_04950 PF00140 Sigma-70 factor, region 1.2 IOD65_04950 PF03979 Sigma-70 factor, region 1.1 IOD65_04950 PF04545 Sigma-70, region 4 IOD65_04950 PF04546 Sigma-70, non-essential region IOD65_04950 PF04539 Sigma-70 region 3 IOD65_04965 PF00581 Rhodanese-like domain IOD65_04965 PF17773 UPF0176 acylphosphatase like domain IOD65_04975 PF00285 Citrate synthase, C-terminal domain IOD65_04985 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IOD65_04990 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IOD65_04995 PF00890 FAD binding domain IOD65_04995 PF02910 Fumarate reductase flavoprotein C-term IOD65_05000 PF13085 2Fe-2S iron-sulfur cluster binding domain IOD65_05015 PF02779 Transketolase, pyrimidine binding domain IOD65_05015 PF16870 2-oxoglutarate dehydrogenase C-terminal IOD65_05015 PF00676 Dehydrogenase E1 component IOD65_05015 PF16078 2-oxoglutarate dehydrogenase N-terminus IOD65_05020 PF02817 e3 binding domain IOD65_05020 PF00364 Biotin-requiring enzyme IOD65_05020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IOD65_05025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IOD65_05025 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_05030 PF08442 ATP-grasp domain IOD65_05030 PF00549 CoA-ligase IOD65_05035 PF00549 CoA-ligase IOD65_05035 PF02629 CoA binding domain IOD65_05040 PF00579 tRNA synthetases class I (W and Y) IOD65_05045 PF05661 Protein of unknown function (DUF808) IOD65_05050 PF04228 Putative neutral zinc metallopeptidase IOD65_05055 PF00999 Sodium/hydrogen exchanger family IOD65_05070 PF13936 Helix-turn-helix domain IOD65_05070 PF00665 Integrase core domain IOD65_05080 PF09587 Bacterial capsule synthesis protein PGA_cap IOD65_05090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IOD65_05100 PF00582 Universal stress protein family IOD65_05105 PF00132 Bacterial transferase hexapeptide (six repeats) IOD65_05110 PF01042 Endoribonuclease L-PSP IOD65_05115 PF00440 Bacterial regulatory proteins, tetR family IOD65_05120 PF01272 Transcription elongation factor, GreA/GreB, C-term IOD65_05120 PF03449 Transcription elongation factor, N-terminal IOD65_05125 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IOD65_05125 PF02142 MGS-like domain IOD65_05125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IOD65_05130 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IOD65_05130 PF00117 Glutamine amidotransferase class-I IOD65_05150 PF01985 CRS1 / YhbY (CRM) domain IOD65_05155 PF01728 FtsJ-like methyltransferase IOD65_05160 PF17862 AAA+ lid domain IOD65_05160 PF06480 FtsH Extracellular IOD65_05160 PF01434 Peptidase family M41 IOD65_05160 PF00004 ATPase family associated with various cellular activities (AAA) IOD65_05165 PF00809 Pterin binding enzyme IOD65_05185 PF09423 PhoD-like phosphatase IOD65_05185 PF16655 PhoD-like phosphatase, N-terminal domain IOD65_05200 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IOD65_05200 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IOD65_05215 PF00083 Sugar (and other) transporter IOD65_05220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IOD65_05220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IOD65_05225 PF01266 FAD dependent oxidoreductase IOD65_05225 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IOD65_05230 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain IOD65_05230 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain IOD65_05235 PF00781 Diacylglycerol kinase catalytic domain IOD65_05240 PF00149 Calcineurin-like phosphoesterase IOD65_05250 PF00166 Chaperonin 10 Kd subunit IOD65_05255 PF00118 TCP-1/cpn60 chaperonin family IOD65_05260 PF01219 Prokaryotic diacylglycerol kinase IOD65_05270 PF03009 Glycerophosphoryl diester phosphodiesterase family IOD65_05275 PF00873 AcrB/AcrD/AcrF family IOD65_05285 PF01435 Peptidase family M48 IOD65_05290 PF01464 Transglycosylase SLT domain IOD65_05295 PF01171 PP-loop family IOD65_05305 PF01464 Transglycosylase SLT domain IOD65_05305 PF00497 Bacterial extracellular solute-binding proteins, family 3 IOD65_05310 PF03449 Transcription elongation factor, N-terminal IOD65_05310 PF01272 Transcription elongation factor, GreA/GreB, C-term IOD65_05320 PF00589 Phage integrase family IOD65_05320 PF13356 Arm DNA-binding domain IOD65_05395 PF00872 Transposase, Mutator family IOD65_05415 PF00529 HlyD membrane-fusion protein of T1SS IOD65_05415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IOD65_05420 PF00873 AcrB/AcrD/AcrF family IOD65_05440 PF07690 Major Facilitator Superfamily IOD65_05455 PF01545 Cation efflux family IOD65_05455 PF16916 Dimerisation domain of Zinc Transporter IOD65_05465 PF14863 Alkyl sulfatase dimerisation IOD65_05465 PF14864 Alkyl sulfatase C-terminal IOD65_05465 PF00753 Metallo-beta-lactamase superfamily IOD65_05475 PF02417 Chromate transporter IOD65_05480 PF09828 Chromate resistance exported protein IOD65_05485 PF13676 TIR domain IOD65_05505 PF03466 LysR substrate binding domain IOD65_05505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_05510 PF03180 NLPA lipoprotein IOD65_05530 PF00300 Histidine phosphatase superfamily (branch 1) IOD65_05535 PF00480 ROK family IOD65_05550 PF00529 HlyD membrane-fusion protein of T1SS IOD65_05550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IOD65_05555 PF00873 AcrB/AcrD/AcrF family IOD65_05560 PF00881 Nitroreductase family IOD65_05575 PF02595 Glycerate kinase family IOD65_05580 PF00384 Molybdopterin oxidoreductase IOD65_05585 PF02634 FdhD/NarQ family IOD65_05595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IOD65_05595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IOD65_05595 PF11890 Domain of unknown function (DUF3410) IOD65_05600 PF00152 tRNA synthetases class II (D, K and N) IOD65_05610 PF18073 Rubredoxin metal binding domain IOD65_05615 PF01235 Sodium:alanine symporter family IOD65_05620 PF00324 Amino acid permease IOD65_05630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IOD65_05630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IOD65_05635 PF01678 Diaminopimelate epimerase IOD65_05640 PF01810 LysE type translocator IOD65_05645 PF00589 Phage integrase family IOD65_05645 PF02899 Phage integrase, N-terminal SAM-like domain IOD65_05650 PF01012 Electron transfer flavoprotein domain IOD65_05655 PF00766 Electron transfer flavoprotein FAD-binding domain IOD65_05655 PF01012 Electron transfer flavoprotein domain IOD65_05660 PF00521 DNA gyrase/topoisomerase IV, subunit A IOD65_05660 PF03989 DNA gyrase C-terminal domain, beta-propeller IOD65_05675 PF13533 Biotin-lipoyl like IOD65_05685 PF00266 Aminotransferase class-V IOD65_05695 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IOD65_05705 PF02687 FtsX-like permease family IOD65_05705 PF12704 MacB-like periplasmic core domain IOD65_05710 PF00005 ABC transporter IOD65_05715 PF13567 Domain of unknown function (DUF4131) IOD65_05715 PF03772 Competence protein IOD65_05715 PF00753 Metallo-beta-lactamase superfamily IOD65_05725 PF01343 Peptidase family S49 IOD65_05725 PF06965 Na+/H+ antiporter 1 IOD65_05730 PF12697 Alpha/beta hydrolase family IOD65_05735 PF00551 Formyl transferase IOD65_05740 PF00586 AIR synthase related protein, N-terminal domain IOD65_05740 PF02769 AIR synthase related protein, C-terminal domain IOD65_05745 PF01594 AI-2E family transporter IOD65_05750 PF00308 Bacterial dnaA protein IOD65_05750 PF08299 Bacterial dnaA protein helix-turn-helix IOD65_05750 PF11638 DnaA N-terminal domain IOD65_05780 PF08032 RNA 2'-O ribose methyltransferase substrate binding IOD65_05780 PF00588 SpoU rRNA Methylase family IOD65_05785 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IOD65_05795 PF00691 OmpA family IOD65_05800 PF07676 WD40-like Beta Propeller Repeat IOD65_05800 PF04052 TolB amino-terminal domain IOD65_05810 PF02472 Biopolymer transport protein ExbD/TolR IOD65_05815 PF01618 MotA/TolQ/ExbB proton channel family IOD65_05820 PF03061 Thioesterase superfamily IOD65_05825 PF07687 Peptidase dimerisation domain IOD65_05825 PF01546 Peptidase family M20/M25/M40 IOD65_05830 PF17864 RuvB AAA lid domain IOD65_05830 PF05491 RuvB C-terminal winged helix domain IOD65_05830 PF05496 Holliday junction DNA helicase RuvB P-loop domain IOD65_05835 PF01330 RuvA N terminal domain IOD65_05835 PF07499 RuvA, C-terminal domain IOD65_05840 PF01966 HD domain IOD65_05845 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IOD65_05845 PF02769 AIR synthase related protein, C-terminal domain IOD65_05845 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IOD65_05850 PF07690 Major Facilitator Superfamily IOD65_05855 PF01784 NIF3 (NGG1p interacting factor 3) IOD65_05860 PF00378 Enoyl-CoA hydratase/isomerase IOD65_05865 PF01467 Cytidylyltransferase-like IOD65_05865 PF00293 NUDIX domain IOD65_05880 PF00578 AhpC/TSA family IOD65_05895 PF06508 Queuosine biosynthesis protein QueC IOD65_05905 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IOD65_05905 PF00132 Bacterial transferase hexapeptide (six repeats) IOD65_05905 PF14602 Hexapeptide repeat of succinyl-transferase IOD65_05915 PF03466 LysR substrate binding domain IOD65_05915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_05920 PF12857 TOBE-like domain IOD65_05920 PF00005 ABC transporter IOD65_05925 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_05930 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_05945 PF01063 Amino-transferase class IV IOD65_05950 PF02618 YceG-like family IOD65_05955 PF02223 Thymidylate kinase IOD65_05965 PF00890 FAD binding domain IOD65_05965 PF02910 Fumarate reductase flavoprotein C-term IOD65_05970 PF13180 PDZ domain IOD65_05980 PF06421 GTP-binding protein LepA C-terminus IOD65_05980 PF03144 Elongation factor Tu domain 2 IOD65_05980 PF00009 Elongation factor Tu GTP binding domain IOD65_05980 PF00679 Elongation factor G C-terminus IOD65_05985 PF10502 Signal peptidase, peptidase S26 IOD65_05995 PF00035 Double-stranded RNA binding motif IOD65_05995 PF14622 Ribonuclease-III-like IOD65_06000 PF07650 KH domain IOD65_06000 PF01926 50S ribosome-binding GTPase IOD65_06010 PF11967 Recombination protein O N terminal IOD65_06010 PF02565 Recombination protein O C terminal IOD65_06015 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IOD65_06020 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IOD65_06025 PF00106 short chain dehydrogenase IOD65_06050 PF00892 EamA-like transporter family IOD65_06055 PF00155 Aminotransferase class I and II IOD65_06065 PF17151 Periplasmic sensor domain IOD65_06065 PF00990 Diguanylate cyclase, GGDEF domain IOD65_06075 PF12344 Ultra-violet resistance protein B IOD65_06075 PF17757 UvrB interaction domain IOD65_06075 PF02151 UvrB/uvrC motif IOD65_06075 PF04851 Type III restriction enzyme, res subunit IOD65_06075 PF00271 Helicase conserved C-terminal domain IOD65_06085 PF00892 EamA-like transporter family IOD65_06090 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IOD65_06090 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IOD65_06105 PF01926 50S ribosome-binding GTPase IOD65_06105 PF01018 GTP1/OBG IOD65_06110 PF00696 Amino acid kinase family IOD65_06110 PF01472 PUA domain IOD65_06120 PF07759 Protein of unknown function (DUF1615) IOD65_06125 PF01207 Dihydrouridine synthase (Dus) IOD65_06130 PF03060 Nitronate monooxygenase IOD65_06145 PF02350 UDP-N-acetylglucosamine 2-epimerase IOD65_06175 PF03441 FAD binding domain of DNA photolyase IOD65_06175 PF00875 DNA photolyase IOD65_06180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IOD65_06185 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_06190 PF07943 Penicillin-binding protein 5, C-terminal domain IOD65_06190 PF00768 D-alanyl-D-alanine carboxypeptidase IOD65_06200 PF03971 Monomeric isocitrate dehydrogenase IOD65_06205 PF00849 RNA pseudouridylate synthase IOD65_06210 PF00180 Isocitrate/isopropylmalate dehydrogenase IOD65_06220 PF06779 Uncharacterised MFS-type transporter YbfB IOD65_06225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_06225 PF03466 LysR substrate binding domain IOD65_06230 PF00375 Sodium:dicarboxylate symporter family IOD65_06240 PF00675 Insulinase (Peptidase family M16) IOD65_06240 PF05193 Peptidase M16 inactive domain IOD65_06265 PF02581 Thiamine monophosphate synthase IOD65_06270 PF00202 Aminotransferase class-III IOD65_06280 PF00849 RNA pseudouridylate synthase IOD65_06285 PF00271 Helicase conserved C-terminal domain IOD65_06285 PF12137 RNA polymerase recycling family C-terminal IOD65_06285 PF00176 SNF2 family N-terminal domain IOD65_06285 PF18339 RapA N-terminal Tudor like domain 1 IOD65_06285 PF18337 RapA N-terminal Tudor like domain IOD65_06295 PF00440 Bacterial regulatory proteins, tetR family IOD65_06300 PF00970 Oxidoreductase FAD-binding domain IOD65_06300 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD65_06300 PF00175 Oxidoreductase NAD-binding domain IOD65_06305 PF00487 Fatty acid desaturase IOD65_06315 PF00202 Aminotransferase class-III IOD65_06320 PF00282 Pyridoxal-dependent decarboxylase conserved domain IOD65_06325 PF00171 Aldehyde dehydrogenase family IOD65_06330 PF01037 Lrp/AsnC ligand binding domain IOD65_06335 PF00205 Thiamine pyrophosphate enzyme, central domain IOD65_06335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IOD65_06335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IOD65_06340 PF00324 Amino acid permease IOD65_06345 PF12849 PBP superfamily domain IOD65_06350 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_06355 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_06360 PF00005 ABC transporter IOD65_06365 PF01343 Peptidase family S49 IOD65_06365 PF08496 Peptidase family S49 N-terminal IOD65_06380 PF08328 Adenylosuccinate lyase C-terminal IOD65_06380 PF00206 Lyase IOD65_06385 PF04356 Protein of unknown function (DUF489) IOD65_06395 PF00293 NUDIX domain IOD65_06395 PF13344 Haloacid dehalogenase-like hydrolase IOD65_06415 PF00132 Bacterial transferase hexapeptide (six repeats) IOD65_06420 PF00768 D-alanyl-D-alanine carboxypeptidase IOD65_06420 PF07943 Penicillin-binding protein 5, C-terminal domain IOD65_06435 PF01975 Survival protein SurE IOD65_06440 PF01551 Peptidase family M23 IOD65_06440 PF01476 LysM domain IOD65_06445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_06445 PF03466 LysR substrate binding domain IOD65_06450 PF05362 Lon protease (S16) C-terminal proteolytic domain IOD65_06450 PF13654 AAA domain IOD65_06455 PF07690 Major Facilitator Superfamily IOD65_06460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IOD65_06465 PF13593 SBF-like CPA transporter family (DUF4137) IOD65_06470 PF01197 Ribosomal protein L31 IOD65_06485 PF04055 Radical SAM superfamily IOD65_06490 PF08207 Elongation factor P (EF-P) KOW-like domain IOD65_06490 PF01132 Elongation factor P (EF-P) OB domain IOD65_06490 PF09285 Elongation factor P, C-terminal IOD65_06495 PF02554 Carbon starvation protein CstA IOD65_06495 PF13722 5TM C-terminal transporter carbon starvation CstA IOD65_06500 PF04328 Selenoprotein, putative IOD65_06510 PF13356 Arm DNA-binding domain IOD65_06510 PF00589 Phage integrase family IOD65_06605 PF01208 Uroporphyrinogen decarboxylase (URO-D) IOD65_06610 PF05675 Protein of unknown function (DUF817) IOD65_06625 PF00144 Beta-lactamase IOD65_06630 PF01227 GTP cyclohydrolase I IOD65_06635 PF01799 [2Fe-2S] binding domain IOD65_06635 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD65_06635 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IOD65_06635 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IOD65_06640 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IOD65_06640 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IOD65_06650 PF01713 Smr domain IOD65_06655 PF00218 Indole-3-glycerol phosphate synthase IOD65_06660 PF00591 Glycosyl transferase family, a/b domain IOD65_06660 PF02885 Glycosyl transferase family, helical bundle domain IOD65_06665 PF00593 TonB dependent receptor IOD65_06665 PF07715 TonB-dependent Receptor Plug Domain IOD65_06670 PF11838 ERAP1-like C-terminal domain IOD65_06670 PF01433 Peptidase family M1 domain IOD65_06675 PF00117 Glutamine amidotransferase class-I IOD65_06685 PF00854 POT family IOD65_06690 PF00120 Glutamine synthetase, catalytic domain IOD65_06690 PF03951 Glutamine synthetase, beta-Grasp domain IOD65_06695 PF04345 Chorismate lyase IOD65_06700 PF01040 UbiA prenyltransferase family IOD65_06735 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IOD65_06735 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IOD65_06740 PF01784 NIF3 (NGG1p interacting factor 3) IOD65_06745 PF13180 PDZ domain IOD65_06750 PF01743 Poly A polymerase head domain IOD65_06750 PF12627 Probable RNA and SrmB- binding site of polymerase A IOD65_06755 PF01515 Phosphate acetyl/butaryl transferase IOD65_06755 PF00390 Malic enzyme, N-terminal domain IOD65_06755 PF03949 Malic enzyme, NAD binding domain IOD65_06760 PF00990 Diguanylate cyclase, GGDEF domain IOD65_06760 PF00563 EAL domain IOD65_06760 PF03707 Bacterial signalling protein N terminal repeat IOD65_06765 PF04452 RNA methyltransferase IOD65_06780 PF02219 Methylenetetrahydrofolate reductase IOD65_06785 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IOD65_06785 PF05221 S-adenosyl-L-homocysteine hydrolase IOD65_06800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_06800 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_06800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_06800 PF09317 Domain of unknown function (DUF1974) IOD65_06805 PF04055 Radical SAM superfamily IOD65_06810 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_06810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IOD65_06820 PF07690 Major Facilitator Superfamily IOD65_06830 PF00557 Metallopeptidase family M24 IOD65_06835 PF00318 Ribosomal protein S2 IOD65_06840 PF00889 Elongation factor TS IOD65_06850 PF12833 Helix-turn-helix domain IOD65_06870 PF05036 Sporulation related domain IOD65_06870 PF03330 Lytic transglycolase IOD65_06875 PF13406 Transglycosylase SLT domain IOD65_06880 PF01098 Cell cycle protein IOD65_06890 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IOD65_06890 PF14489 QueF-like protein IOD65_06895 PF01061 ABC-2 type transporter IOD65_06900 PF00005 ABC transporter IOD65_06930 PF00464 Serine hydroxymethyltransferase IOD65_06935 PF02321 Outer membrane efflux protein IOD65_06940 PF00873 AcrB/AcrD/AcrF family IOD65_06945 PF13533 Biotin-lipoyl like IOD65_06950 PF03466 LysR substrate binding domain IOD65_06950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_06955 PF00497 Bacterial extracellular solute-binding proteins, family 3 IOD65_06960 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_06965 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_06970 PF00005 ABC transporter IOD65_06975 PF00893 Small Multidrug Resistance protein IOD65_06980 PF00037 4Fe-4S binding domain IOD65_06985 PF16325 Peptidase family U32 C-terminal domain IOD65_06985 PF01136 Peptidase family U32 IOD65_06990 PF00392 Bacterial regulatory proteins, gntR family IOD65_06990 PF00155 Aminotransferase class I and II IOD65_06995 PF02567 Phenazine biosynthesis-like protein IOD65_07000 PF00970 Oxidoreductase FAD-binding domain IOD65_07000 PF00175 Oxidoreductase NAD-binding domain IOD65_07005 PF18389 TrmO C-terminal domain IOD65_07005 PF01980 tRNA-methyltransferase O IOD65_07015 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IOD65_07015 PF00437 Type II/IV secretion system protein IOD65_07025 PF00486 Transcriptional regulatory protein, C terminal IOD65_07025 PF00072 Response regulator receiver domain IOD65_07030 PF00512 His Kinase A (phospho-acceptor) domain IOD65_07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_07030 PF08521 Two-component sensor kinase N-terminal IOD65_07040 PF00293 NUDIX domain IOD65_07050 PF00912 Transglycosylase IOD65_07050 PF00905 Penicillin binding protein transpeptidase domain IOD65_07050 PF14814 Bifunctional transglycosylase second domain IOD65_07055 PF01513 ATP-NAD kinase IOD65_07060 PF07023 Protein of unknown function (DUF1315) IOD65_07065 PF00591 Glycosyl transferase family, a/b domain IOD65_07065 PF02885 Glycosyl transferase family, helical bundle domain IOD65_07070 PF00375 Sodium:dicarboxylate symporter family IOD65_07075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_07075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_07075 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_07085 PF01817 Chorismate mutase type II IOD65_07085 PF00800 Prephenate dehydratase IOD65_07085 PF01842 ACT domain IOD65_07090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IOD65_07100 PF01546 Peptidase family M20/M25/M40 IOD65_07100 PF07687 Peptidase dimerisation domain IOD65_07105 PF00753 Metallo-beta-lactamase superfamily IOD65_07115 PF03883 Peroxide stress protein YaaA IOD65_07120 PF05690 Thiazole biosynthesis protein ThiG IOD65_07130 PF04241 Protein of unknown function (DUF423) IOD65_07135 PF04542 Sigma-70 region 2 IOD65_07135 PF04545 Sigma-70, region 4 IOD65_07135 PF00140 Sigma-70 factor, region 1.2 IOD65_07145 PF00313 'Cold-shock' DNA-binding domain IOD65_07150 PF00271 Helicase conserved C-terminal domain IOD65_07150 PF00270 DEAD/DEAH box helicase IOD65_07160 PF00881 Nitroreductase family IOD65_07165 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IOD65_07165 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IOD65_07185 PF01180 Dihydroorotate dehydrogenase IOD65_07190 PF02674 Colicin V production protein IOD65_07195 PF00156 Phosphoribosyl transferase domain IOD65_07210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IOD65_07210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IOD65_07215 PF01435 Peptidase family M48 IOD65_07220 PF09424 Yqey-like protein IOD65_07225 PF01165 Ribosomal protein S21 IOD65_07230 PF00814 Glycoprotease family IOD65_07250 PF03793 PASTA domain IOD65_07250 PF00069 Protein kinase domain IOD65_07275 PF00313 'Cold-shock' DNA-binding domain IOD65_07290 PF00561 alpha/beta hydrolase fold IOD65_07295 PF03616 Sodium/glutamate symporter IOD65_07300 PF00999 Sodium/hydrogen exchanger family IOD65_07300 PF02254 TrkA-N domain IOD65_07320 PF00155 Aminotransferase class I and II IOD65_07325 PF06826 Predicted Permease Membrane Region IOD65_07325 PF02080 TrkA-C domain IOD65_07335 PF04403 Paraquat-inducible protein A IOD65_07340 PF02470 MlaD protein IOD65_07365 PF00576 HIUase/Transthyretin family IOD65_07375 PF00072 Response regulator receiver domain IOD65_07375 PF00486 Transcriptional regulatory protein, C terminal IOD65_07380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_07380 PF00672 HAMP domain IOD65_07380 PF00512 His Kinase A (phospho-acceptor) domain IOD65_07420 PF08521 Two-component sensor kinase N-terminal IOD65_07420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_07420 PF00512 His Kinase A (phospho-acceptor) domain IOD65_07425 PF00072 Response regulator receiver domain IOD65_07425 PF00486 Transcriptional regulatory protein, C terminal IOD65_07440 PF01177 Asp/Glu/Hydantoin racemase IOD65_07445 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_07445 PF00107 Zinc-binding dehydrogenase IOD65_07450 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IOD65_07455 PF05853 beta-keto acid cleavage enzyme IOD65_07460 PF07690 Major Facilitator Superfamily IOD65_07475 PF03601 Conserved hypothetical protein 698 IOD65_07500 PF07995 Glucose / Sorbosone dehydrogenase IOD65_07505 PF01494 FAD binding domain IOD65_07510 PF07690 Major Facilitator Superfamily IOD65_07515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_07515 PF03466 LysR substrate binding domain IOD65_07535 PF00375 Sodium:dicarboxylate symporter family IOD65_07545 PF00753 Metallo-beta-lactamase superfamily IOD65_07545 PF16123 Hydroxyacylglutathione hydrolase C-terminus IOD65_07550 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_07555 PF09383 NIL domain IOD65_07555 PF00005 ABC transporter IOD65_07560 PF03180 NLPA lipoprotein IOD65_07565 PF02844 Phosphoribosylglycinamide synthetase, N domain IOD65_07565 PF02843 Phosphoribosylglycinamide synthetase, C domain IOD65_07565 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IOD65_07570 PF01808 AICARFT/IMPCHase bienzyme IOD65_07570 PF02142 MGS-like domain IOD65_07575 PF02954 Bacterial regulatory protein, Fis family IOD65_07595 PF01134 Glucose inhibited division protein A IOD65_07595 PF13932 GidA associated domain IOD65_07605 PF14403 Circularly permuted ATP-grasp type 2 IOD65_07615 PF08379 Bacterial transglutaminase-like N-terminal region IOD65_07615 PF01841 Transglutaminase-like superfamily IOD65_07625 PF01168 Alanine racemase, N-terminal domain IOD65_07625 PF00842 Alanine racemase, C-terminal domain IOD65_07630 PF00772 DnaB-like helicase N terminal domain IOD65_07630 PF03796 DnaB-like helicase C terminal domain IOD65_07635 PF03948 Ribosomal protein L9, C-terminal domain IOD65_07635 PF01281 Ribosomal protein L9, N-terminal domain IOD65_07640 PF01084 Ribosomal protein S18 IOD65_07645 PF01250 Ribosomal protein S6 IOD65_07650 PF01040 UbiA prenyltransferase family IOD65_07655 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IOD65_07660 PF00510 Cytochrome c oxidase subunit III IOD65_07665 PF00115 Cytochrome C and Quinol oxidase polypeptide I IOD65_07670 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IOD65_07670 PF06481 COX Aromatic Rich Motif IOD65_07680 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IOD65_07680 PF02896 PEP-utilising enzyme, TIM barrel domain IOD65_07680 PF00391 PEP-utilising enzyme, mobile domain IOD65_07685 PF03618 Kinase/pyrophosphorylase IOD65_07695 PF01522 Polysaccharide deacetylase IOD65_07695 PF14883 Hypothetical glycosyl hydrolase family 13 IOD65_07700 PF00535 Glycosyl transferase family 2 IOD65_07705 PF13994 PgaD-like protein IOD65_07715 PF00296 Luciferase-like monooxygenase IOD65_07730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_07730 PF03466 LysR substrate binding domain IOD65_07740 PF00472 RF-1 domain IOD65_07740 PF03462 PCRF domain IOD65_07745 PF17827 PrmC N-terminal domain IOD65_07745 PF13847 Methyltransferase domain IOD65_07750 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_07755 PF09084 NMT1/THI5 like IOD65_07765 PF00106 short chain dehydrogenase IOD65_07770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_07770 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_07770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_07775 PF01613 Flavin reductase like domain IOD65_07780 PF00899 ThiF family IOD65_07785 PF03109 ABC1 family IOD65_07790 PF02152 Dihydroneopterin aldolase IOD65_07800 PF03814 Potassium-transporting ATPase A subunit IOD65_07810 PF02669 K+-transporting ATPase, c chain IOD65_07815 PF00512 His Kinase A (phospho-acceptor) domain IOD65_07815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_07815 PF02702 Osmosensitive K+ channel His kinase sensor domain IOD65_07815 PF13493 Domain of unknown function (DUF4118) IOD65_07820 PF00072 Response regulator receiver domain IOD65_07820 PF00486 Transcriptional regulatory protein, C terminal IOD65_07825 PF00120 Glutamine synthetase, catalytic domain IOD65_07835 PF03232 Ubiquinone biosynthesis protein COQ7 IOD65_07840 PF07690 Major Facilitator Superfamily IOD65_07845 PF01103 Surface antigen IOD65_07845 PF07244 Surface antigen variable number repeat IOD65_07845 PF17243 POTRA domain TamA domain 1 IOD65_07865 PF00330 Aconitase family (aconitate hydratase) IOD65_07865 PF11791 Aconitate B N-terminal domain IOD65_07865 PF06434 Aconitate hydratase 2 N-terminus IOD65_07875 PF00027 Cyclic nucleotide-binding domain IOD65_07875 PF00520 Ion transport protein IOD65_07880 PF07690 Major Facilitator Superfamily IOD65_07895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_07895 PF03466 LysR substrate binding domain IOD65_07900 PF04284 Protein of unknown function (DUF441) IOD65_07915 PF01479 S4 domain IOD65_07915 PF00849 RNA pseudouridylate synthase IOD65_07930 PF01479 S4 domain IOD65_07930 PF00849 RNA pseudouridylate synthase IOD65_07935 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IOD65_07940 PF08676 MutL C terminal dimerisation domain IOD65_07940 PF01119 DNA mismatch repair protein, C-terminal domain IOD65_07950 PF17209 Hfq protein IOD65_07960 PF00881 Nitroreductase family IOD65_07970 PF00149 Calcineurin-like phosphoesterase IOD65_07975 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IOD65_07980 PF00749 tRNA synthetases class I (E and Q), catalytic domain IOD65_07980 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IOD65_07985 PF00117 Glutamine amidotransferase class-I IOD65_07985 PF00958 GMP synthase C terminal domain IOD65_07985 PF02540 NAD synthase IOD65_07990 PF05985 Ethanolamine ammonia-lyase light chain (EutC) IOD65_07995 PF06751 Ethanolamine ammonia lyase large subunit (EutB) IOD65_08000 PF13520 Amino acid permease IOD65_08005 PF00171 Aldehyde dehydrogenase family IOD65_08020 PF00465 Iron-containing alcohol dehydrogenase IOD65_08025 PF05970 PIF1-like helicase IOD65_08025 PF14493 Helix-turn-helix domain IOD65_08035 PF02110 Hydroxyethylthiazole kinase family IOD65_08050 PF11940 Domain of unknown function (DUF3458) Ig-like fold IOD65_08050 PF01433 Peptidase family M1 domain IOD65_08050 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IOD65_08065 PF13953 PapC C-terminal domain IOD65_08065 PF13954 PapC N-terminal domain IOD65_08065 PF00577 Outer membrane usher protein IOD65_08090 PF01817 Chorismate mutase type II IOD65_08105 PF00593 TonB dependent receptor IOD65_08105 PF07715 TonB-dependent Receptor Plug Domain IOD65_08105 PF07660 Secretin and TonB N terminus short domain IOD65_08125 PF18331 PKHD-type hydroxylase C-terminal domain IOD65_08125 PF13640 2OG-Fe(II) oxygenase superfamily IOD65_08140 PF00117 Glutamine amidotransferase class-I IOD65_08170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_08170 PF03466 LysR substrate binding domain IOD65_08200 PF04151 Bacterial pre-peptidase C-terminal domain IOD65_08205 PF12848 ABC transporter IOD65_08205 PF00005 ABC transporter IOD65_08210 PF00582 Universal stress protein family IOD65_08230 PF03594 Benzoate membrane transport protein IOD65_08235 PF01037 Lrp/AsnC ligand binding domain IOD65_08240 PF01810 LysE type translocator IOD65_08245 PF13202 EF hand IOD65_08245 PF00923 Transaldolase/Fructose-6-phosphate aldolase IOD65_08250 PF03466 LysR substrate binding domain IOD65_08250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_08260 PF00108 Thiolase, N-terminal domain IOD65_08260 PF02803 Thiolase, C-terminal domain IOD65_08270 PF01575 MaoC like domain IOD65_08275 PF00144 Beta-lactamase IOD65_08285 PF07690 Major Facilitator Superfamily IOD65_08300 PF12170 DNA polymerase III tau subunit V interacting with alpha IOD65_08300 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IOD65_08300 PF12169 DNA polymerase III subunits gamma and tau domain III IOD65_08305 PF04185 Phosphoesterase family IOD65_08305 PF05506 Domain of unknown function (DUF756) IOD65_08310 PF03061 Thioesterase superfamily IOD65_08315 PF00465 Iron-containing alcohol dehydrogenase IOD65_08330 PF01638 HxlR-like helix-turn-helix IOD65_08340 PF01451 Low molecular weight phosphotyrosine protein phosphatase IOD65_08345 PF01565 FAD binding domain IOD65_08345 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IOD65_08370 PF01645 Conserved region in glutamate synthase IOD65_08375 PF13737 Transposase DDE domain IOD65_08395 PF12832 MFS_1 like family IOD65_08405 PF02785 Biotin carboxylase C-terminal domain IOD65_08405 PF00289 Biotin carboxylase, N-terminal domain IOD65_08405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IOD65_08410 PF00364 Biotin-requiring enzyme IOD65_08415 PF01220 Dehydroquinase class II IOD65_08420 PF11799 impB/mucB/samB family C-terminal domain IOD65_08420 PF00817 impB/mucB/samB family IOD65_08420 PF13438 Domain of unknown function (DUF4113) IOD65_08425 PF00593 TonB dependent receptor IOD65_08425 PF07715 TonB-dependent Receptor Plug Domain IOD65_08430 PF03328 HpcH/HpaI aldolase/citrate lyase family IOD65_08435 PF06276 Ferric iron reductase FhuF-like transporter IOD65_08435 PF04183 IucA / IucC family IOD65_08440 PF07690 Major Facilitator Superfamily IOD65_08445 PF04183 IucA / IucC family IOD65_08445 PF06276 Ferric iron reductase FhuF-like transporter IOD65_08450 PF02423 Ornithine cyclodeaminase/mu-crystallin family IOD65_08455 PF00291 Pyridoxal-phosphate dependent enzyme IOD65_08465 PF00005 ABC transporter IOD65_08480 PF18267 Rubredoxin NAD+ reductase C-terminal domain IOD65_08480 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_08480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IOD65_08480 PF04324 BFD-like [2Fe-2S] binding domain IOD65_08480 PF13806 Rieske-like [2Fe-2S] domain IOD65_08480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IOD65_08485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IOD65_08485 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_08485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IOD65_08485 PF04324 BFD-like [2Fe-2S] binding domain IOD65_08485 PF18267 Rubredoxin NAD+ reductase C-terminal domain IOD65_08490 PF04324 BFD-like [2Fe-2S] binding domain IOD65_08490 PF01568 Molydopterin dinucleotide binding domain IOD65_08490 PF00384 Molybdopterin oxidoreductase IOD65_08490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IOD65_08495 PF12804 MobA-like NTP transferase domain IOD65_08500 PF00384 Molybdopterin oxidoreductase IOD65_08500 PF01568 Molydopterin dinucleotide binding domain IOD65_08500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IOD65_08505 PF06463 Molybdenum Cofactor Synthesis C IOD65_08505 PF04055 Radical SAM superfamily IOD65_08515 PF02391 MoaE protein IOD65_08520 PF01967 MoaC family IOD65_08520 PF00994 Probable molybdopterin binding domain IOD65_08525 PF03453 MoeA N-terminal region (domain I and II) IOD65_08525 PF00994 Probable molybdopterin binding domain IOD65_08525 PF03454 MoeA C-terminal region (domain IV) IOD65_08530 PF01638 HxlR-like helix-turn-helix IOD65_08535 PF00155 Aminotransferase class I and II IOD65_08535 PF00392 Bacterial regulatory proteins, gntR family IOD65_08540 PF00892 EamA-like transporter family IOD65_08560 PF02635 DsrE/DsrF-like family IOD65_08565 PF16363 GDP-mannose 4,6 dehydratase IOD65_08570 PF00206 Lyase IOD65_08570 PF10415 Fumarase C C-terminus IOD65_08580 PF00561 alpha/beta hydrolase fold IOD65_08600 PF01266 FAD dependent oxidoreductase IOD65_08610 PF02542 YgbB family IOD65_08620 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IOD65_08620 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IOD65_08625 PF00440 Bacterial regulatory proteins, tetR family IOD65_08630 PF02954 Bacterial regulatory protein, Fis family IOD65_08630 PF00158 Sigma-54 interaction domain IOD65_08630 PF00072 Response regulator receiver domain IOD65_08635 PF00512 His Kinase A (phospho-acceptor) domain IOD65_08635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_08635 PF00989 PAS fold IOD65_08645 PF00919 Uncharacterized protein family UPF0004 IOD65_08645 PF18693 TRAM domain IOD65_08645 PF04055 Radical SAM superfamily IOD65_08650 PF00696 Amino acid kinase family IOD65_08655 PF01765 Ribosome recycling factor IOD65_08660 PF01255 Putative undecaprenyl diphosphate synthase IOD65_08670 PF13288 DXP reductoisomerase C-terminal domain IOD65_08670 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IOD65_08670 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IOD65_08675 PF17820 PDZ domain IOD65_08675 PF13180 PDZ domain IOD65_08675 PF02163 Peptidase family M50 IOD65_08680 PF07244 Surface antigen variable number repeat IOD65_08680 PF01103 Surface antigen IOD65_08690 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IOD65_08690 PF00132 Bacterial transferase hexapeptide (six repeats) IOD65_08695 PF07977 FabA-like domain IOD65_08700 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IOD65_08700 PF00132 Bacterial transferase hexapeptide (six repeats) IOD65_08715 PF02631 RecX family IOD65_08720 PF00154 recA bacterial DNA recombination protein IOD65_08725 PF01479 S4 domain IOD65_08730 PF13419 Haloacid dehalogenase-like hydrolase IOD65_08745 PF01037 Lrp/AsnC ligand binding domain IOD65_08750 PF00266 Aminotransferase class-V IOD65_08755 PF00324 Amino acid permease IOD65_08770 PF00082 Subtilase family IOD65_08770 PF05922 Peptidase inhibitor I9 IOD65_08775 PF01740 STAS domain IOD65_08775 PF00916 Sulfate permease family IOD65_08785 PF07995 Glucose / Sorbosone dehydrogenase IOD65_08795 PF03707 Bacterial signalling protein N terminal repeat IOD65_08795 PF00563 EAL domain IOD65_08795 PF00990 Diguanylate cyclase, GGDEF domain IOD65_08800 PF13936 Helix-turn-helix domain IOD65_08800 PF00665 Integrase core domain IOD65_08815 PF02378 Phosphotransferase system, EIIC IOD65_08815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IOD65_08820 PF00294 pfkB family carbohydrate kinase IOD65_08825 PF05524 PEP-utilising enzyme, N-terminal IOD65_08825 PF00391 PEP-utilising enzyme, mobile domain IOD65_08825 PF00381 PTS HPr component phosphorylation site IOD65_08825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IOD65_08825 PF02896 PEP-utilising enzyme, TIM barrel domain IOD65_08845 PF03928 Haem-degrading IOD65_08850 PF05525 Branched-chain amino acid transport protein IOD65_08855 PF00557 Metallopeptidase family M24 IOD65_08860 PF03466 LysR substrate binding domain IOD65_08860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_08870 PF00462 Glutaredoxin IOD65_08875 PF00202 Aminotransferase class-III IOD65_08880 PF01380 SIS domain IOD65_08880 PF00571 CBS domain IOD65_08905 PF00448 SRP54-type protein, GTPase domain IOD65_08905 PF02881 SRP54-type protein, helical bundle domain IOD65_08915 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) IOD65_08930 PF08173 Membrane bound YbgT-like protein IOD65_08935 PF02322 Cytochrome bd terminal oxidase subunit II IOD65_08940 PF01654 Cytochrome bd terminal oxidase subunit I IOD65_08950 PF07290 Protein of unknown function (DUF1449) IOD65_08960 PF00294 pfkB family carbohydrate kinase IOD65_08965 PF08367 Peptidase M16C associated IOD65_08965 PF00675 Insulinase (Peptidase family M16) IOD65_08965 PF05193 Peptidase M16 inactive domain IOD65_08970 PF02253 Phospholipase A1 IOD65_08975 PF02386 Cation transport protein IOD65_08980 PF02080 TrkA-C domain IOD65_08980 PF02254 TrkA-N domain IOD65_08985 PF00291 Pyridoxal-phosphate dependent enzyme IOD65_08985 PF00585 C-terminal regulatory domain of Threonine dehydratase IOD65_08990 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IOD65_09005 PF01118 Semialdehyde dehydrogenase, NAD binding domain IOD65_09005 PF02774 Semialdehyde dehydrogenase, dimerisation domain IOD65_09015 PF02617 ATP-dependent Clp protease adaptor protein ClpS IOD65_09020 PF17871 AAA lid domain IOD65_09020 PF02861 Clp amino terminal domain, pathogenicity island component IOD65_09020 PF10431 C-terminal, D2-small domain, of ClpB protein IOD65_09020 PF07724 AAA domain (Cdc48 subfamily) IOD65_09020 PF00004 ATPase family associated with various cellular activities (AAA) IOD65_09025 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IOD65_09030 PF00793 DAHP synthetase I family IOD65_09045 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_09045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IOD65_09075 PF06418 CTP synthase N-terminus IOD65_09075 PF00117 Glutamine amidotransferase class-I IOD65_09080 PF00793 DAHP synthetase I family IOD65_09085 PF03952 Enolase, N-terminal domain IOD65_09085 PF00113 Enolase, C-terminal TIM barrel domain IOD65_09090 PF04239 Protein of unknown function (DUF421) IOD65_09100 PF13936 Helix-turn-helix domain IOD65_09100 PF00665 Integrase core domain IOD65_09140 PF00216 Bacterial DNA-binding protein IOD65_09165 PF13401 AAA domain IOD65_09165 PF01471 Putative peptidoglycan binding domain IOD65_09190 PF10502 Signal peptidase, peptidase S26 IOD65_09225 PF03237 Terminase-like family IOD65_09240 PF06074 Protein of unknown function (DUF935) IOD65_09245 PF04233 Phage Mu protein F like protein IOD65_09350 PF00593 TonB dependent receptor IOD65_09350 PF07715 TonB-dependent Receptor Plug Domain IOD65_09355 PF04977 Septum formation initiator IOD65_09360 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IOD65_09365 PF01144 Coenzyme A transferase IOD65_09370 PF01144 Coenzyme A transferase IOD65_09375 PF02803 Thiolase, C-terminal domain IOD65_09375 PF00108 Thiolase, N-terminal domain IOD65_09380 PF00206 Lyase IOD65_09380 PF10397 Adenylosuccinate lyase C-terminus IOD65_09385 PF00561 alpha/beta hydrolase fold IOD65_09390 PF07690 Major Facilitator Superfamily IOD65_09395 PF02627 Carboxymuconolactone decarboxylase family IOD65_09400 PF00775 Dioxygenase IOD65_09400 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal IOD65_09405 PF00775 Dioxygenase IOD65_09410 PF01487 Type I 3-dehydroquinase IOD65_09415 PF05048 Periplasmic copper-binding protein (NosD) IOD65_09420 PF04966 Carbohydrate-selective porin, OprB family IOD65_09425 PF01011 PQQ enzyme repeat IOD65_09425 PF13360 PQQ-like domain IOD65_09435 PF04143 Sulphur transport IOD65_09445 PF00753 Metallo-beta-lactamase superfamily IOD65_09450 PF01614 Bacterial transcriptional regulator IOD65_09450 PF09339 IclR helix-turn-helix domain IOD65_09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_09455 PF03466 LysR substrate binding domain IOD65_09460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_09460 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_09460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_09475 PF00106 short chain dehydrogenase IOD65_09485 PF07690 Major Facilitator Superfamily IOD65_09495 PF01425 Amidase IOD65_09500 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IOD65_09515 PF00355 Rieske [2Fe-2S] domain IOD65_09515 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IOD65_09530 PF00175 Oxidoreductase NAD-binding domain IOD65_09530 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD65_09535 PF01613 Flavin reductase like domain IOD65_09540 PF12833 Helix-turn-helix domain IOD65_09540 PF02311 AraC-like ligand binding domain IOD65_09545 PF02728 Copper amine oxidase, N3 domain IOD65_09545 PF01179 Copper amine oxidase, enzyme domain IOD65_09545 PF02727 Copper amine oxidase, N2 domain IOD65_09545 PF07833 Copper amine oxidase N-terminal domain IOD65_09555 PF00171 Aldehyde dehydrogenase family IOD65_09560 PF12146 Serine aminopeptidase, S33 IOD65_09565 PF00108 Thiolase, N-terminal domain IOD65_09565 PF02803 Thiolase, C-terminal domain IOD65_09570 PF01144 Coenzyme A transferase IOD65_09575 PF01144 Coenzyme A transferase IOD65_09580 PF04444 Catechol dioxygenase N terminus IOD65_09580 PF00775 Dioxygenase IOD65_09585 PF02426 Muconolactone delta-isomerase IOD65_09590 PF13378 Enolase C-terminal domain-like IOD65_09590 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IOD65_09595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_09595 PF03466 LysR substrate binding domain IOD65_09605 PF07729 FCD domain IOD65_09605 PF00392 Bacterial regulatory proteins, gntR family IOD65_09610 PF00920 Dehydratase family IOD65_09615 PF07690 Major Facilitator Superfamily IOD65_09625 PF00171 Aldehyde dehydrogenase family IOD65_09630 PF00576 HIUase/Transthyretin family IOD65_09635 PF00860 Permease family IOD65_09645 PF01494 FAD binding domain IOD65_09650 PF07729 FCD domain IOD65_09650 PF00392 Bacterial regulatory proteins, gntR family IOD65_09660 PF09084 NMT1/THI5 like IOD65_09665 PF00005 ABC transporter IOD65_09670 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_09675 PF01979 Amidohydrolase family IOD65_09685 PF00561 alpha/beta hydrolase fold IOD65_09690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IOD65_09690 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_09695 PF00106 short chain dehydrogenase IOD65_09700 PF00376 MerR family regulatory protein IOD65_09700 PF09278 MerR, DNA binding IOD65_09710 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_09725 PF12706 Beta-lactamase superfamily domain IOD65_09730 PF00440 Bacterial regulatory proteins, tetR family IOD65_09730 PF08359 YsiA-like protein, C-terminal region IOD65_09735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_09735 PF03466 LysR substrate binding domain IOD65_09750 PF00106 short chain dehydrogenase IOD65_09755 PF01575 MaoC like domain IOD65_09760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_09760 PF12806 Acetyl-CoA dehydrogenase C-terminal like IOD65_09760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_09760 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_09770 PF13193 AMP-binding enzyme C-terminal domain IOD65_09770 PF00501 AMP-binding enzyme IOD65_09800 PF03466 LysR substrate binding domain IOD65_09800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_09820 PF07690 Major Facilitator Superfamily IOD65_09825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IOD65_09825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IOD65_09825 PF01842 ACT domain IOD65_09830 PF03737 Aldolase/RraA IOD65_09845 PF03466 LysR substrate binding domain IOD65_09845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_09850 PF00202 Aminotransferase class-III IOD65_09855 PF00171 Aldehyde dehydrogenase family IOD65_09860 PF00324 Amino acid permease IOD65_09865 PF13533 Biotin-lipoyl like IOD65_09880 PF00171 Aldehyde dehydrogenase family IOD65_09885 PF00920 Dehydratase family IOD65_09895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_09895 PF03466 LysR substrate binding domain IOD65_09900 PF01370 NAD dependent epimerase/dehydratase family IOD65_09905 PF07690 Major Facilitator Superfamily IOD65_09910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IOD65_09910 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IOD65_09925 PF01032 FecCD transport family IOD65_09930 PF00005 ABC transporter IOD65_09950 PF14572 Phosphoribosyl synthetase-associated domain IOD65_09950 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IOD65_09955 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IOD65_09970 PF13533 Biotin-lipoyl like IOD65_09975 PF07690 Major Facilitator Superfamily IOD65_10000 PF01975 Survival protein SurE IOD65_10010 PF13291 ACT domain IOD65_10010 PF02824 TGS domain IOD65_10010 PF04607 Region found in RelA / SpoT proteins IOD65_10030 PF06114 IrrE N-terminal-like domain IOD65_10055 PF13673 Acetyltransferase (GNAT) domain IOD65_10080 PF16970 Type-1 fimbrial protein, A IOD65_10085 PF02753 Pili assembly chaperone PapD, C-terminal domain IOD65_10085 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IOD65_10090 PF13953 PapC C-terminal domain IOD65_10090 PF00577 Outer membrane usher protein IOD65_10090 PF13954 PapC N-terminal domain IOD65_10105 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_10105 PF00107 Zinc-binding dehydrogenase IOD65_10115 PF00199 Catalase IOD65_10135 PF13091 PLD-like domain IOD65_10145 PF00512 His Kinase A (phospho-acceptor) domain IOD65_10145 PF00672 HAMP domain IOD65_10145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_10150 PF00072 Response regulator receiver domain IOD65_10150 PF00486 Transcriptional regulatory protein, C terminal IOD65_10155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IOD65_10155 PF00529 HlyD membrane-fusion protein of T1SS IOD65_10160 PF00873 AcrB/AcrD/AcrF family IOD65_10175 PF01244 Membrane dipeptidase (Peptidase family M19) IOD65_10180 PF04055 Radical SAM superfamily IOD65_10180 PF13186 Iron-sulfur cluster-binding domain IOD65_10185 PF05402 Coenzyme PQQ synthesis protein D (PqqD) IOD65_10190 PF03070 TENA/THI-4/PQQC family IOD65_10195 PF12706 Beta-lactamase superfamily domain IOD65_10200 PF08042 PqqA family IOD65_10205 PF00149 Calcineurin-like phosphoesterase IOD65_10215 PF00550 Phosphopantetheine attachment site IOD65_10215 PF00857 Isochorismatase family IOD65_10220 PF00106 short chain dehydrogenase IOD65_10225 PF00005 ABC transporter IOD65_10225 PF03459 TOBE domain IOD65_10230 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_10240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_10240 PF03459 TOBE domain IOD65_10245 PF00355 Rieske [2Fe-2S] domain IOD65_10245 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IOD65_10250 PF00866 Ring hydroxylating beta subunit IOD65_10255 PF00970 Oxidoreductase FAD-binding domain IOD65_10255 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD65_10255 PF00175 Oxidoreductase NAD-binding domain IOD65_10260 PF12833 Helix-turn-helix domain IOD65_10260 PF14525 AraC-binding-like domain IOD65_10270 PF01613 Flavin reductase like domain IOD65_10285 PF01738 Dienelactone hydrolase family IOD65_10290 PF07690 Major Facilitator Superfamily IOD65_10295 PF12833 Helix-turn-helix domain IOD65_10295 PF06719 AraC-type transcriptional regulator N-terminus IOD65_10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_10345 PF03466 LysR substrate binding domain IOD65_10350 PF01144 Coenzyme A transferase IOD65_10355 PF01144 Coenzyme A transferase IOD65_10360 PF02667 Short chain fatty acid transporter IOD65_10365 PF00108 Thiolase, N-terminal domain IOD65_10365 PF02803 Thiolase, C-terminal domain IOD65_10370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_10370 PF03466 LysR substrate binding domain IOD65_10375 PF03466 LysR substrate binding domain IOD65_10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_10390 PF10415 Fumarase C C-terminus IOD65_10390 PF00206 Lyase IOD65_10395 PF07715 TonB-dependent Receptor Plug Domain IOD65_10395 PF00593 TonB dependent receptor IOD65_10400 PF00083 Sugar (and other) transporter IOD65_10410 PF02525 Flavodoxin-like fold IOD65_10415 PF01638 HxlR-like helix-turn-helix IOD65_10420 PF12833 Helix-turn-helix domain IOD65_10420 PF06445 GyrI-like small molecule binding domain IOD65_10435 PF01925 Sulfite exporter TauE/SafE IOD65_10440 PF04273 Putative phosphatase (DUF442) IOD65_10440 PF00753 Metallo-beta-lactamase superfamily IOD65_10445 PF00753 Metallo-beta-lactamase superfamily IOD65_10450 PF02954 Bacterial regulatory protein, Fis family IOD65_10450 PF00072 Response regulator receiver domain IOD65_10450 PF00158 Sigma-54 interaction domain IOD65_10455 PF01062 Bestrophin, RFP-TM, chloride channel IOD65_10460 PF00107 Zinc-binding dehydrogenase IOD65_10460 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_10465 PF00106 short chain dehydrogenase IOD65_10470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IOD65_10470 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_10475 PF00364 Biotin-requiring enzyme IOD65_10475 PF02817 e3 binding domain IOD65_10475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IOD65_10480 PF02780 Transketolase, C-terminal domain IOD65_10480 PF02779 Transketolase, pyrimidine binding domain IOD65_10485 PF00676 Dehydrogenase E1 component IOD65_10490 PF04055 Radical SAM superfamily IOD65_10505 PF00990 Diguanylate cyclase, GGDEF domain IOD65_10505 PF08448 PAS fold IOD65_10520 PF01264 Chorismate synthase IOD65_10525 PF05175 Methyltransferase small domain IOD65_10530 PF00291 Pyridoxal-phosphate dependent enzyme IOD65_10540 PF00004 ATPase family associated with various cellular activities (AAA) IOD65_10540 PF17862 AAA+ lid domain IOD65_10540 PF01434 Peptidase family M41 IOD65_10550 PF05166 YcgL domain IOD65_10570 PF03466 LysR substrate binding domain IOD65_10570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_10575 PF02525 Flavodoxin-like fold IOD65_10580 PF01612 3'-5' exonuclease IOD65_10580 PF00570 HRDC domain IOD65_10585 PF02132 RecR protein IOD65_10585 PF13662 Toprim domain IOD65_10590 PF02575 YbaB/EbfC DNA-binding family IOD65_10600 PF01053 Cys/Met metabolism PLP-dependent enzyme IOD65_10620 PF01230 HIT domain IOD65_10645 PF02684 Lipid-A-disaccharide synthetase IOD65_10650 PF07715 TonB-dependent Receptor Plug Domain IOD65_10650 PF00593 TonB dependent receptor IOD65_10670 PF01925 Sulfite exporter TauE/SafE IOD65_10675 PF00793 DAHP synthetase I family IOD65_10680 PF02654 Cobalamin-5-phosphate synthase IOD65_10695 PF02277 Phosphoribosyltransferase IOD65_10700 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IOD65_10710 PF13419 Haloacid dehalogenase-like hydrolase IOD65_10715 PF07715 TonB-dependent Receptor Plug Domain IOD65_10715 PF00593 TonB dependent receptor IOD65_10720 PF04073 Aminoacyl-tRNA editing domain IOD65_10730 PF03109 ABC1 family IOD65_10735 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_10735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_10735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_10740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_10740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_10740 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_10745 PF00487 Fatty acid desaturase IOD65_10750 PF12852 Cupin IOD65_10750 PF12833 Helix-turn-helix domain IOD65_10755 PF00639 PPIC-type PPIASE domain IOD65_10755 PF09312 SurA N-terminal domain IOD65_10760 PF00216 Bacterial DNA-binding protein IOD65_10775 PF02082 Transcriptional regulator IOD65_10780 PF00266 Aminotransferase class-V IOD65_10785 PF01592 NifU-like N terminal domain IOD65_10790 PF01521 Iron-sulphur cluster biosynthesis IOD65_10795 PF07743 HSCB C-terminal oligomerisation domain IOD65_10795 PF00226 DnaJ domain IOD65_10800 PF00012 Hsp70 protein IOD65_10805 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD65_10810 PF00211 Adenylate and Guanylate cyclase catalytic domain IOD65_10820 PF02559 CarD-like/TRCF domain IOD65_10820 PF00270 DEAD/DEAH box helicase IOD65_10820 PF00271 Helicase conserved C-terminal domain IOD65_10820 PF03461 TRCF domain IOD65_10820 PF17757 UvrB interaction domain IOD65_10840 PF03737 Aldolase/RraA IOD65_10845 PF13460 NAD(P)H-binding IOD65_10850 PF01649 Ribosomal protein S20 IOD65_10860 PF00459 Inositol monophosphatase family IOD65_10875 PF00005 ABC transporter IOD65_10875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IOD65_10880 PF12911 N-terminal TM domain of oligopeptide transport permease C IOD65_10880 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_10885 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_10890 PF01432 Peptidase family M3 IOD65_10895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IOD65_10910 PF00593 TonB dependent receptor IOD65_10910 PF07715 TonB-dependent Receptor Plug Domain IOD65_10920 PF01618 MotA/TolQ/ExbB proton channel family IOD65_10925 PF02472 Biopolymer transport protein ExbD/TolR IOD65_10930 PF02472 Biopolymer transport protein ExbD/TolR IOD65_10940 PF01274 Malate synthase IOD65_10945 PF03969 AFG1-like ATPase IOD65_10955 PF00743 Flavin-binding monooxygenase-like IOD65_10960 PF03956 Lysine exporter LysO IOD65_10965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IOD65_10975 PF00216 Bacterial DNA-binding protein IOD65_10980 PF00575 S1 RNA binding domain IOD65_10985 PF02224 Cytidylate kinase IOD65_10995 PF14437 MafB19-like deaminase IOD65_11005 PF03167 Uracil DNA glycosylase superfamily IOD65_11015 PF03934 Type II secretion system (T2SS), protein K IOD65_11020 PF11612 Type II secretion system (T2SS), protein J IOD65_11020 PF07963 Prokaryotic N-terminal methylation motif IOD65_11025 PF07963 Prokaryotic N-terminal methylation motif IOD65_11025 PF02501 Type II secretion system (T2SS), protein I IOD65_11040 PF01026 TatD related DNase IOD65_11050 PF09115 DNA polymerase III, delta subunit, C terminal IOD65_11055 PF02348 Cytidylyltransferase IOD65_11060 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IOD65_11065 PF00005 ABC transporter IOD65_11065 PF00664 ABC transporter transmembrane region IOD65_11075 PF01618 MotA/TolQ/ExbB proton channel family IOD65_11080 PF02195 ParB-like nuclease domain IOD65_11080 PF17762 HTH domain found in ParB protein IOD65_11085 PF13614 AAA domain IOD65_11090 PF02527 rRNA small subunit methyltransferase G IOD65_11095 PF00483 Nucleotidyl transferase IOD65_11100 PF01636 Phosphotransferase enzyme family IOD65_11105 PF03968 OstA-like protein IOD65_11105 PF04453 LPS transport system D IOD65_11110 PF00639 PPIC-type PPIASE domain IOD65_11110 PF09312 SurA N-terminal domain IOD65_11115 PF01116 Fructose-bisphosphate aldolase class-II IOD65_11125 PF00162 Phosphoglycerate kinase IOD65_11135 PF02545 Maf-like protein IOD65_11140 PF08007 Cupin superfamily protein IOD65_11155 PF00375 Sodium:dicarboxylate symporter family IOD65_11160 PF06912 Protein of unknown function (DUF1275) IOD65_11165 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) IOD65_11170 PF00005 ABC transporter IOD65_11170 PF00664 ABC transporter transmembrane region IOD65_11175 PF00665 Integrase core domain IOD65_11175 PF13936 Helix-turn-helix domain IOD65_11185 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IOD65_11185 PF12833 Helix-turn-helix domain IOD65_11190 PF01597 Glycine cleavage H-protein IOD65_11195 PF02146 Sir2 family IOD65_11205 PF01037 Lrp/AsnC ligand binding domain IOD65_11210 PF14850 DNA-binding domain of Proline dehydrogenase IOD65_11210 PF01619 Proline dehydrogenase IOD65_11210 PF00171 Aldehyde dehydrogenase family IOD65_11210 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IOD65_11215 PF04229 GrpB protein IOD65_11220 PF05958 tRNA (Uracil-5-)-methyltransferase IOD65_11230 PF09992 Phosphodiester glycosidase IOD65_11240 PF04264 YceI-like domain IOD65_11250 PF02780 Transketolase, C-terminal domain IOD65_11250 PF00456 Transketolase, thiamine diphosphate binding domain IOD65_11250 PF02779 Transketolase, pyrimidine binding domain IOD65_11255 PF02773 S-adenosylmethionine synthetase, C-terminal domain IOD65_11255 PF00438 S-adenosylmethionine synthetase, N-terminal domain IOD65_11255 PF02772 S-adenosylmethionine synthetase, central domain IOD65_11275 PF00905 Penicillin binding protein transpeptidase domain IOD65_11290 PF02075 Crossover junction endodeoxyribonuclease RuvC IOD65_11295 PF01256 Carbohydrate kinase IOD65_11295 PF03853 YjeF-related protein N-terminus IOD65_11300 PF08331 Domain of unknown function (DUF1730) IOD65_11305 PF04055 Radical SAM superfamily IOD65_11305 PF06968 Biotin and Thiamin Synthesis associated domain IOD65_11320 PF16970 Type-1 fimbrial protein, A IOD65_11325 PF02753 Pili assembly chaperone PapD, C-terminal domain IOD65_11325 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IOD65_11330 PF00577 Outer membrane usher protein IOD65_11330 PF13954 PapC N-terminal domain IOD65_11330 PF13953 PapC C-terminal domain IOD65_11335 PF00419 Fimbrial protein IOD65_11345 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IOD65_11345 PF12833 Helix-turn-helix domain IOD65_11355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_11355 PF03466 LysR substrate binding domain IOD65_11360 PF00892 EamA-like transporter family IOD65_11370 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IOD65_11380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_11380 PF03466 LysR substrate binding domain IOD65_11395 PF00440 Bacterial regulatory proteins, tetR family IOD65_11405 PF01709 Transcriptional regulator IOD65_11410 PF01037 Lrp/AsnC ligand binding domain IOD65_11420 PF00005 ABC transporter IOD65_11425 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_11430 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_11440 PF13737 Transposase DDE domain IOD65_11450 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IOD65_11450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_11460 PF00296 Luciferase-like monooxygenase IOD65_11465 PF03180 NLPA lipoprotein IOD65_11470 PF03180 NLPA lipoprotein IOD65_11475 PF00005 ABC transporter IOD65_11475 PF09383 NIL domain IOD65_11480 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_11485 PF06071 Protein of unknown function (DUF933) IOD65_11485 PF01926 50S ribosome-binding GTPase IOD65_11510 PF03591 AzlC protein IOD65_11515 PF05437 Branched-chain amino acid transport protein (AzlD) IOD65_11525 PF02222 ATP-grasp domain IOD65_11530 PF01909 Nucleotidyltransferase domain IOD65_11530 PF01966 HD domain IOD65_11530 PF08335 GlnD PII-uridylyltransferase IOD65_11535 PF00155 Aminotransferase class I and II IOD65_11545 PF02311 AraC-like ligand binding domain IOD65_11545 PF12833 Helix-turn-helix domain IOD65_11550 PF00255 Glutathione peroxidase IOD65_11555 PF01641 SelR domain IOD65_11560 PF00155 Aminotransferase class I and II IOD65_11565 PF00375 Sodium:dicarboxylate symporter family IOD65_11570 PF00710 Asparaginase, N-terminal IOD65_11570 PF17763 Glutaminase/Asparaginase C-terminal domain IOD65_11575 PF01336 OB-fold nucleic acid binding domain IOD65_11575 PF02811 PHP domain IOD65_11575 PF14579 Helix-hairpin-helix motif IOD65_11575 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IOD65_11575 PF07733 Bacterial DNA polymerase III alpha NTPase domain IOD65_11580 PF00588 SpoU rRNA Methylase family IOD65_11585 PF00132 Bacterial transferase hexapeptide (six repeats) IOD65_11600 PF13192 Thioredoxin domain IOD65_11600 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_11615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_11615 PF03466 LysR substrate binding domain IOD65_11620 PF03358 NADPH-dependent FMN reductase IOD65_11625 PF01758 Sodium Bile acid symporter family IOD65_11635 PF01022 Bacterial regulatory protein, arsR family IOD65_11640 PF03960 ArsC family IOD65_11650 PF01979 Amidohydrolase family IOD65_11650 PF13382 Adenine deaminase C-terminal domain IOD65_11660 PF03466 LysR substrate binding domain IOD65_11660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_11670 PF13936 Helix-turn-helix domain IOD65_11670 PF00665 Integrase core domain IOD65_11680 PF01177 Asp/Glu/Hydantoin racemase IOD65_11685 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IOD65_11690 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_11695 PF00005 ABC transporter IOD65_11700 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IOD65_11710 PF00083 Sugar (and other) transporter IOD65_11715 PF13936 Helix-turn-helix domain IOD65_11715 PF00665 Integrase core domain IOD65_11720 PF00296 Luciferase-like monooxygenase IOD65_11735 PF01654 Cytochrome bd terminal oxidase subunit I IOD65_11740 PF02322 Cytochrome bd terminal oxidase subunit II IOD65_11750 PF00155 Aminotransferase class I and II IOD65_11750 PF00392 Bacterial regulatory proteins, gntR family IOD65_11755 PF03466 LysR substrate binding domain IOD65_11755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_11770 PF00698 Acyl transferase domain IOD65_11775 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG IOD65_11785 PF01039 Carboxyl transferase domain IOD65_11790 PF06857 Malonate decarboxylase delta subunit (MdcD) IOD65_11795 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase IOD65_11800 PF16957 Malonate decarboxylase, alpha subunit, transporter IOD65_11805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_11805 PF03466 LysR substrate binding domain IOD65_11815 PF02627 Carboxymuconolactone decarboxylase family IOD65_11825 PF07690 Major Facilitator Superfamily IOD65_11830 PF00106 short chain dehydrogenase IOD65_11850 PF00155 Aminotransferase class I and II IOD65_11850 PF00392 Bacterial regulatory proteins, gntR family IOD65_11855 PF04172 LrgB-like family IOD65_11860 PF03788 LrgA family IOD65_11865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_11865 PF03466 LysR substrate binding domain IOD65_11870 PF14834 Glutathione S-transferase, C-terminal domain IOD65_11870 PF02798 Glutathione S-transferase, N-terminal domain IOD65_11875 PF02798 Glutathione S-transferase, N-terminal domain IOD65_11895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_11895 PF03466 LysR substrate binding domain IOD65_11905 PF00581 Rhodanese-like domain IOD65_11910 PF00132 Bacterial transferase hexapeptide (six repeats) IOD65_11920 PF00266 Aminotransferase class-V IOD65_11925 PF01810 LysE type translocator IOD65_11930 PF03466 LysR substrate binding domain IOD65_11930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_11940 PF00497 Bacterial extracellular solute-binding proteins, family 3 IOD65_11945 PF00497 Bacterial extracellular solute-binding proteins, family 3 IOD65_11950 PF00005 ABC transporter IOD65_11955 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_11960 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_11975 PF00072 Response regulator receiver domain IOD65_11980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_11980 PF09308 LuxQ, periplasmic IOD65_11980 PF00072 Response regulator receiver domain IOD65_11980 PF00512 His Kinase A (phospho-acceptor) domain IOD65_11990 PF13404 AsnC-type helix-turn-helix domain IOD65_11990 PF01037 Lrp/AsnC ligand binding domain IOD65_12000 PF00717 Peptidase S24-like IOD65_12025 PF18011 C-terminal domain found in long catalases IOD65_12025 PF00199 Catalase IOD65_12025 PF06628 Catalase-related immune-responsive IOD65_12065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_12065 PF03466 LysR substrate binding domain IOD65_12075 PF07690 Major Facilitator Superfamily IOD65_12090 PF13193 AMP-binding enzyme C-terminal domain IOD65_12090 PF00501 AMP-binding enzyme IOD65_12095 PF00440 Bacterial regulatory proteins, tetR family IOD65_12100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_12100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_12100 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_12105 PF01039 Carboxyl transferase domain IOD65_12110 PF00378 Enoyl-CoA hydratase/isomerase IOD65_12115 PF00364 Biotin-requiring enzyme IOD65_12115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IOD65_12115 PF18140 Propionyl-coenzyme A carboxylase BT domain IOD65_12115 PF02785 Biotin carboxylase C-terminal domain IOD65_12115 PF00289 Biotin carboxylase, N-terminal domain IOD65_12120 PF00682 HMGL-like IOD65_12125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_12125 PF03466 LysR substrate binding domain IOD65_12140 PF12806 Acetyl-CoA dehydrogenase C-terminal like IOD65_12140 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_12140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_12140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_12150 PF07690 Major Facilitator Superfamily IOD65_12160 PF01144 Coenzyme A transferase IOD65_12165 PF01144 Coenzyme A transferase IOD65_12170 PF07690 Major Facilitator Superfamily IOD65_12175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_12175 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_12175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_12180 PF00378 Enoyl-CoA hydratase/isomerase IOD65_12190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IOD65_12190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IOD65_12190 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IOD65_12195 PF00108 Thiolase, N-terminal domain IOD65_12195 PF02803 Thiolase, C-terminal domain IOD65_12200 PF09339 IclR helix-turn-helix domain IOD65_12210 PF03060 Nitronate monooxygenase IOD65_12215 PF00378 Enoyl-CoA hydratase/isomerase IOD65_12220 PF09339 IclR helix-turn-helix domain IOD65_12225 PF02515 CoA-transferase family III IOD65_12230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_12230 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_12230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_12235 PF07690 Major Facilitator Superfamily IOD65_12240 PF13419 Haloacid dehalogenase-like hydrolase IOD65_12245 PF00266 Aminotransferase class-V IOD65_12250 PF01266 FAD dependent oxidoreductase IOD65_12255 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_12260 PF00005 ABC transporter IOD65_12260 PF08402 TOBE domain IOD65_12270 PF07702 UTRA domain IOD65_12270 PF00392 Bacterial regulatory proteins, gntR family IOD65_12275 PF01168 Alanine racemase, N-terminal domain IOD65_12275 PF00842 Alanine racemase, C-terminal domain IOD65_12280 PF01494 FAD binding domain IOD65_12285 PF01614 Bacterial transcriptional regulator IOD65_12285 PF09339 IclR helix-turn-helix domain IOD65_12290 PF02525 Flavodoxin-like fold IOD65_12295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_12295 PF03466 LysR substrate binding domain IOD65_12320 PF03061 Thioesterase superfamily IOD65_12325 PF00132 Bacterial transferase hexapeptide (six repeats) IOD65_12330 PF08223 PaaX-like protein C-terminal domain IOD65_12330 PF07848 PaaX-like protein IOD65_12335 PF14535 AMP-binding enzyme C-terminal domain IOD65_12335 PF00501 AMP-binding enzyme IOD65_12340 PF02803 Thiolase, C-terminal domain IOD65_12340 PF00108 Thiolase, N-terminal domain IOD65_12345 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IOD65_12345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IOD65_12345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IOD65_12350 PF00378 Enoyl-CoA hydratase/isomerase IOD65_12355 PF00378 Enoyl-CoA hydratase/isomerase IOD65_12360 PF00175 Oxidoreductase NAD-binding domain IOD65_12360 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD65_12360 PF00970 Oxidoreductase FAD-binding domain IOD65_12365 PF01883 Iron-sulfur cluster assembly protein IOD65_12370 PF05138 Phenylacetic acid catabolic protein IOD65_12375 PF06243 Phenylacetic acid degradation B IOD65_12380 PF05138 Phenylacetic acid catabolic protein IOD65_12385 PF00171 Aldehyde dehydrogenase family IOD65_12385 PF01575 MaoC like domain IOD65_12390 PF03313 Serine dehydratase alpha chain IOD65_12390 PF03315 Serine dehydratase beta chain IOD65_12405 PF09278 MerR, DNA binding IOD65_12405 PF00376 MerR family regulatory protein IOD65_12415 PF02677 Epoxyqueuosine reductase QueH IOD65_12420 PF00155 Aminotransferase class I and II IOD65_12420 PF00392 Bacterial regulatory proteins, gntR family IOD65_12435 PF07690 Major Facilitator Superfamily IOD65_12440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IOD65_12450 PF03466 LysR substrate binding domain IOD65_12450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_12455 PF13737 Transposase DDE domain IOD65_12460 PF00107 Zinc-binding dehydrogenase IOD65_12460 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_12460 PF13823 Alcohol dehydrogenase GroES-associated IOD65_12465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IOD65_12465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IOD65_12470 PF00892 EamA-like transporter family IOD65_12495 PF13332 Hemagglutinin repeat IOD65_12495 PF04829 Pre-toxin domain with VENN motif IOD65_12495 PF05860 haemagglutination activity domain IOD65_12495 PF13018 Extended Signal Peptide of Type V secretion system IOD65_12500 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IOD65_12500 PF17287 POTRA domain IOD65_12500 PF08479 POTRA domain, ShlB-type IOD65_12505 PF00654 Voltage gated chloride channel IOD65_12510 PF02785 Biotin carboxylase C-terminal domain IOD65_12510 PF00289 Biotin carboxylase, N-terminal domain IOD65_12510 PF00364 Biotin-requiring enzyme IOD65_12510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IOD65_12520 PF07286 Protein of unknown function (DUF1445) IOD65_12525 PF03746 LamB/YcsF family IOD65_12530 PF01566 Natural resistance-associated macrophage protein IOD65_12535 PF03466 LysR substrate binding domain IOD65_12535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_12545 PF08281 Sigma-70, region 4 IOD65_12545 PF04542 Sigma-70 region 2 IOD65_12555 PF05114 Protein of unknown function (DUF692) IOD65_12605 PF05368 NmrA-like family IOD65_12610 PF01638 HxlR-like helix-turn-helix IOD65_12625 PF00293 NUDIX domain IOD65_12630 PF00563 EAL domain IOD65_12630 PF00990 Diguanylate cyclase, GGDEF domain IOD65_12630 PF03707 Bacterial signalling protein N terminal repeat IOD65_12635 PF08281 Sigma-70, region 4 IOD65_12635 PF04542 Sigma-70 region 2 IOD65_12640 PF16220 Domain of unknown function (DUF4880) IOD65_12640 PF04773 FecR protein IOD65_12650 PF07715 TonB-dependent Receptor Plug Domain IOD65_12650 PF00593 TonB dependent receptor IOD65_12675 PF07690 Major Facilitator Superfamily IOD65_12685 PF01292 Prokaryotic cytochrome b561 IOD65_12690 PF00199 Catalase IOD65_12695 PF01638 HxlR-like helix-turn-helix IOD65_12705 PF02649 Type I GTP cyclohydrolase folE2 IOD65_12710 PF00101 Ribulose bisphosphate carboxylase, small chain IOD65_12710 PF00132 Bacterial transferase hexapeptide (six repeats) IOD65_12715 PF01979 Amidohydrolase family IOD65_12725 PF00892 EamA-like transporter family IOD65_12730 PF01037 Lrp/AsnC ligand binding domain IOD65_12735 PF13520 Amino acid permease IOD65_12740 PF01636 Phosphotransferase enzyme family IOD65_12750 PF12833 Helix-turn-helix domain IOD65_12750 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IOD65_12755 PF00202 Aminotransferase class-III IOD65_12760 PF00488 MutS domain V IOD65_12760 PF05190 MutS family domain IV IOD65_12760 PF01624 MutS domain I IOD65_12760 PF05192 MutS domain III IOD65_12760 PF05188 MutS domain II IOD65_12770 PF00037 4Fe-4S binding domain IOD65_12770 PF11953 Domain of unknown function (DUF3470) IOD65_12780 PF01596 O-methyltransferase IOD65_12790 PF00132 Bacterial transferase hexapeptide (six repeats) IOD65_12795 PF01205 Uncharacterized protein family UPF0029 IOD65_12800 PF13533 Biotin-lipoyl like IOD65_12805 PF03412 Peptidase C39 family IOD65_12805 PF00664 ABC transporter transmembrane region IOD65_12805 PF00005 ABC transporter IOD65_12810 PF02321 Outer membrane efflux protein IOD65_12815 PF00005 ABC transporter IOD65_12815 PF12399 Branched-chain amino acid ATP-binding cassette transporter IOD65_12820 PF03968 OstA-like protein IOD65_12835 PF00571 CBS domain IOD65_12835 PF01380 SIS domain IOD65_12840 PF09190 DALR domain IOD65_12840 PF01406 tRNA synthetases class I (C) catalytic domain IOD65_12850 PF01555 DNA methylase IOD65_12860 PF13737 Transposase DDE domain IOD65_12880 PF01638 HxlR-like helix-turn-helix IOD65_12885 PF07690 Major Facilitator Superfamily IOD65_12895 PF00924 Mechanosensitive ion channel IOD65_12940 PF00440 Bacterial regulatory proteins, tetR family IOD65_12960 PF08241 Methyltransferase domain IOD65_12965 PF01037 Lrp/AsnC ligand binding domain IOD65_12975 PF14748 Pyrroline-5-carboxylate reductase dimerisation IOD65_12975 PF03807 NADP oxidoreductase coenzyme F420-dependent IOD65_12985 PF00313 'Cold-shock' DNA-binding domain IOD65_12990 PF03279 Bacterial lipid A biosynthesis acyltransferase IOD65_13000 PF00665 Integrase core domain IOD65_13000 PF13936 Helix-turn-helix domain IOD65_13040 PF13742 OB-fold nucleic acid binding domain IOD65_13040 PF02601 Exonuclease VII, large subunit IOD65_13075 PF09278 MerR, DNA binding IOD65_13075 PF00376 MerR family regulatory protein IOD65_13080 PF00403 Heavy-metal-associated domain IOD65_13090 PF00158 Sigma-54 interaction domain IOD65_13090 PF02954 Bacterial regulatory protein, Fis family IOD65_13090 PF02830 V4R domain IOD65_13090 PF06505 Activator of aromatic catabolism IOD65_13100 PF06099 Phenol hydroxylase subunit IOD65_13105 PF02332 Methane/Phenol/Toluene Hydroxylase IOD65_13110 PF02406 MmoB/DmpM family IOD65_13115 PF02332 Methane/Phenol/Toluene Hydroxylase IOD65_13115 PF04945 YHS domain IOD65_13125 PF00175 Oxidoreductase NAD-binding domain IOD65_13125 PF00970 Oxidoreductase FAD-binding domain IOD65_13125 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD65_13135 PF03466 LysR substrate binding domain IOD65_13135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_13145 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IOD65_13145 PF00355 Rieske [2Fe-2S] domain IOD65_13150 PF00866 Ring hydroxylating beta subunit IOD65_13155 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD65_13155 PF00970 Oxidoreductase FAD-binding domain IOD65_13155 PF00175 Oxidoreductase NAD-binding domain IOD65_13160 PF00106 short chain dehydrogenase IOD65_13165 PF03594 Benzoate membrane transport protein IOD65_13170 PF07690 Major Facilitator Superfamily IOD65_13180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IOD65_13180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IOD65_13185 PF00271 Helicase conserved C-terminal domain IOD65_13185 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IOD65_13185 PF11898 Domain of unknown function (DUF3418) IOD65_13185 PF00270 DEAD/DEAH box helicase IOD65_13185 PF04408 Helicase associated domain (HA2) IOD65_13190 PF00578 AhpC/TSA family IOD65_13190 PF10417 C-terminal domain of 1-Cys peroxiredoxin IOD65_13210 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_13210 PF13192 Thioredoxin domain IOD65_13220 PF02798 Glutathione S-transferase, N-terminal domain IOD65_13220 PF00043 Glutathione S-transferase, C-terminal domain IOD65_13230 PF02390 Putative methyltransferase IOD65_13240 PF13417 Glutathione S-transferase, N-terminal domain IOD65_13240 PF00043 Glutathione S-transferase, C-terminal domain IOD65_13250 PF13488 Glycine zipper IOD65_13250 PF00691 OmpA family IOD65_13255 PF01979 Amidohydrolase family IOD65_13260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IOD65_13260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IOD65_13270 PF10672 S-adenosylmethionine-dependent methyltransferase IOD65_13270 PF01170 Putative RNA methylase family UPF0020 IOD65_13270 PF02926 THUMP domain IOD65_13285 PF17871 AAA lid domain IOD65_13285 PF07724 AAA domain (Cdc48 subfamily) IOD65_13285 PF00004 ATPase family associated with various cellular activities (AAA) IOD65_13285 PF02861 Clp amino terminal domain, pathogenicity island component IOD65_13285 PF10431 C-terminal, D2-small domain, of ClpB protein IOD65_13300 PF02566 OsmC-like protein IOD65_13310 PF00027 Cyclic nucleotide-binding domain IOD65_13310 PF13545 Crp-like helix-turn-helix domain IOD65_13315 PF00248 Aldo/keto reductase family IOD65_13330 PF00709 Adenylosuccinate synthetase IOD65_13335 PF13393 Histidyl-tRNA synthetase IOD65_13340 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IOD65_13340 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IOD65_13345 PF02272 DHHA1 domain IOD65_13345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IOD65_13345 PF01411 tRNA synthetases class II (A) IOD65_13350 PF13356 Arm DNA-binding domain IOD65_13350 PF00589 Phage integrase family IOD65_13355 PF00717 Peptidase S24-like IOD65_13360 PF13438 Domain of unknown function (DUF4113) IOD65_13360 PF11799 impB/mucB/samB family C-terminal domain IOD65_13360 PF00817 impB/mucB/samB family IOD65_13365 PF13340 Putative transposase of IS4/5 family (DUF4096) IOD65_13370 PF00107 Zinc-binding dehydrogenase IOD65_13370 PF13823 Alcohol dehydrogenase GroES-associated IOD65_13370 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_13445 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system IOD65_13710 PF13840 ACT domain IOD65_13710 PF00696 Amino acid kinase family IOD65_13710 PF01842 ACT domain IOD65_13715 PF02599 Global regulator protein family IOD65_13720 PF01351 Ribonuclease HII IOD65_13730 PF01292 Prokaryotic cytochrome b561 IOD65_13735 PF00962 Adenosine/AMP deaminase IOD65_13740 PF00860 Permease family IOD65_13750 PF02678 Pirin IOD65_13750 PF17954 Quercetinase C-terminal cupin domain IOD65_13755 PF00440 Bacterial regulatory proteins, tetR family IOD65_13755 PF17932 Tetracyclin repressor-like, C-terminal domain IOD65_13765 PF00106 short chain dehydrogenase IOD65_13770 PF00743 Flavin-binding monooxygenase-like IOD65_13775 PF04072 Leucine carboxyl methyltransferase IOD65_13780 PF12833 Helix-turn-helix domain IOD65_13780 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IOD65_13785 PF00743 Flavin-binding monooxygenase-like IOD65_13790 PF00106 short chain dehydrogenase IOD65_13795 PF07859 alpha/beta hydrolase fold IOD65_13800 PF05199 GMC oxidoreductase IOD65_13805 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding IOD65_13805 PF18381 YcaO cyclodehydratase C-terminal domain IOD65_13810 PF03573 outer membrane porin, OprD family IOD65_13815 PF07690 Major Facilitator Superfamily IOD65_13820 PF00884 Sulfatase IOD65_13825 PF03781 Sulfatase-modifying factor enzyme 1 IOD65_13835 PF00355 Rieske [2Fe-2S] domain IOD65_13840 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD65_13840 PF00175 Oxidoreductase NAD-binding domain IOD65_13855 PF07690 Major Facilitator Superfamily IOD65_13860 PF00378 Enoyl-CoA hydratase/isomerase IOD65_13865 PF00171 Aldehyde dehydrogenase family IOD65_13880 PF03573 outer membrane porin, OprD family IOD65_13895 PF07519 Tannase and feruloyl esterase IOD65_13900 PF07729 FCD domain IOD65_13900 PF00392 Bacterial regulatory proteins, gntR family IOD65_13905 PF00171 Aldehyde dehydrogenase family IOD65_13910 PF00701 Dihydrodipicolinate synthetase family IOD65_13915 PF13378 Enolase C-terminal domain-like IOD65_13920 PF07690 Major Facilitator Superfamily IOD65_13925 PF08666 SAF domain IOD65_13925 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus IOD65_13930 PF00892 EamA-like transporter family IOD65_13935 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IOD65_13935 PF12833 Helix-turn-helix domain IOD65_13940 PF00171 Aldehyde dehydrogenase family IOD65_13950 PF13737 Transposase DDE domain IOD65_13960 PF08479 POTRA domain, ShlB-type IOD65_13960 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB IOD65_13960 PF17287 POTRA domain IOD65_13965 PF00324 Amino acid permease IOD65_13970 PF04958 Arginine N-succinyltransferase beta subunit IOD65_13975 PF00202 Aminotransferase class-III IOD65_13985 PF00171 Aldehyde dehydrogenase family IOD65_13995 PF00392 Bacterial regulatory proteins, gntR family IOD65_13995 PF07729 FCD domain IOD65_14005 PF00324 Amino acid permease IOD65_14010 PF01266 FAD dependent oxidoreductase IOD65_14015 PF00324 Amino acid permease IOD65_14025 PF05643 Putative bacterial lipoprotein (DUF799) IOD65_14040 PF13737 Transposase DDE domain IOD65_14060 PF05987 Bacterial protein of unknown function (DUF898) IOD65_14080 PF09339 IclR helix-turn-helix domain IOD65_14085 PF02515 CoA-transferase family III IOD65_14090 PF02803 Thiolase, C-terminal domain IOD65_14090 PF00108 Thiolase, N-terminal domain IOD65_14095 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IOD65_14095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IOD65_14095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IOD65_14100 PF00378 Enoyl-CoA hydratase/isomerase IOD65_14105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_14105 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_14105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_14115 PF00743 Flavin-binding monooxygenase-like IOD65_14120 PF00171 Aldehyde dehydrogenase family IOD65_14155 PF18623 TnsE C-terminal domain IOD65_14185 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_14185 PF00107 Zinc-binding dehydrogenase IOD65_14190 PF07859 alpha/beta hydrolase fold IOD65_14280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IOD65_14280 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_14285 PF00764 Arginosuccinate synthase IOD65_14290 PF00360 Phytochrome region IOD65_14290 PF01590 GAF domain IOD65_14290 PF00563 EAL domain IOD65_14290 PF00990 Diguanylate cyclase, GGDEF domain IOD65_14295 PF01979 Amidohydrolase family IOD65_14300 PF00929 Exonuclease IOD65_14315 PF07715 TonB-dependent Receptor Plug Domain IOD65_14315 PF00593 TonB dependent receptor IOD65_14320 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_14320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IOD65_14325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IOD65_14325 PF00005 ABC transporter IOD65_14330 PF12911 N-terminal TM domain of oligopeptide transport permease C IOD65_14330 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_14335 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_14340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IOD65_14345 PF01464 Transglycosylase SLT domain IOD65_14345 PF01476 LysM domain IOD65_14350 PF00929 Exonuclease IOD65_14360 PF09297 NADH pyrophosphatase zinc ribbon domain IOD65_14360 PF00293 NUDIX domain IOD65_14370 PF04972 BON domain IOD65_14375 PF02021 Uncharacterised protein family UPF0102 IOD65_14380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IOD65_14385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_14385 PF03466 LysR substrate binding domain IOD65_14390 PF01810 LysE type translocator IOD65_14400 PF13411 MerR HTH family regulatory protein IOD65_14410 PF01494 FAD binding domain IOD65_14415 PF01494 FAD binding domain IOD65_14420 PF05195 Aminopeptidase P, N-terminal domain IOD65_14420 PF00557 Metallopeptidase family M24 IOD65_14460 PF01812 5-formyltetrahydrofolate cyclo-ligase family IOD65_14465 PF05362 Lon protease (S16) C-terminal proteolytic domain IOD65_14465 PF02190 ATP-dependent protease La (LON) substrate-binding domain IOD65_14465 PF00004 ATPase family associated with various cellular activities (AAA) IOD65_14470 PF02590 Predicted SPOUT methyltransferase IOD65_14475 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IOD65_14485 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IOD65_14485 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IOD65_14490 PF04060 Putative Fe-S cluster IOD65_14495 PF10576 Iron-sulfur binding domain of endonuclease III IOD65_14495 PF00730 HhH-GPD superfamily base excision DNA repair protein IOD65_14495 PF00633 Helix-hairpin-helix motif IOD65_14505 PF05191 Adenylate kinase, active site lid IOD65_14520 PF03717 Penicillin-binding Protein dimerisation domain IOD65_14520 PF00905 Penicillin binding protein transpeptidase domain IOD65_14535 PF02492 CobW/HypB/UreG, nucleotide-binding domain IOD65_14540 PF01730 UreF IOD65_14545 PF05194 UreE urease accessory protein, C-terminal domain IOD65_14545 PF02814 UreE urease accessory protein, N-terminal domain IOD65_14550 PF01979 Amidohydrolase family IOD65_14550 PF00449 Urease alpha-subunit, N-terminal domain IOD65_14560 PF00699 Urease beta subunit IOD65_14565 PF00547 Urease, gamma subunit IOD65_14570 PF01774 UreD urease accessory protein IOD65_14580 PF04170 NlpE N-terminal domain IOD65_14580 PF17185 NlpE C-terminal OB domain IOD65_14585 PF00463 Isocitrate lyase family IOD65_14590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_14590 PF03466 LysR substrate binding domain IOD65_14595 PF03471 Transporter associated domain IOD65_14595 PF00571 CBS domain IOD65_14595 PF01595 Cyclin M transmembrane N-terminal domain IOD65_14600 PF03600 Citrate transporter IOD65_14615 PF00009 Elongation factor Tu GTP binding domain IOD65_14620 PF01507 Phosphoadenosine phosphosulfate reductase family IOD65_14630 PF14052 Capsule assembly protein Wzi IOD65_14635 PF00152 tRNA synthetases class II (D, K and N) IOD65_14635 PF01336 OB-fold nucleic acid binding domain IOD65_14650 PF00301 Rubredoxin IOD65_14655 PF18113 Rubredoxin binding C-terminal domain IOD65_14655 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_14660 PF00561 alpha/beta hydrolase fold IOD65_14665 PF03466 LysR substrate binding domain IOD65_14665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_14680 PF13089 Polyphosphate kinase N-terminal domain IOD65_14680 PF17941 Polyphosphate kinase C-terminal domain 1 IOD65_14680 PF13090 Polyphosphate kinase C-terminal domain 2 IOD65_14680 PF02503 Polyphosphate kinase middle domain IOD65_14685 PF00912 Transglycosylase IOD65_14690 PF01694 Rhomboid family IOD65_14700 PF00005 ABC transporter IOD65_14705 PF13472 GDSL-like Lipase/Acylhydrolase family IOD65_14710 PF00484 Carbonic anhydrase IOD65_14715 PF00561 alpha/beta hydrolase fold IOD65_14725 PF07715 TonB-dependent Receptor Plug Domain IOD65_14725 PF00593 TonB dependent receptor IOD65_14730 PF01106 NifU-like domain IOD65_14730 PF01521 Iron-sulphur cluster biosynthesis IOD65_14740 PF00884 Sulfatase IOD65_14745 PF03781 Sulfatase-modifying factor enzyme 1 IOD65_14760 PF00291 Pyridoxal-phosphate dependent enzyme IOD65_14765 PF01384 Phosphate transporter family IOD65_14770 PF02965 Vitamin B12 dependent methionine synthase, activation domain IOD65_14770 PF02310 B12 binding domain IOD65_14770 PF02574 Homocysteine S-methyltransferase IOD65_14770 PF02607 B12 binding domain IOD65_14770 PF00809 Pterin binding enzyme IOD65_14780 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IOD65_14785 PF02779 Transketolase, pyrimidine binding domain IOD65_14785 PF02780 Transketolase, C-terminal domain IOD65_14790 PF00456 Transketolase, thiamine diphosphate binding domain IOD65_14795 PF07690 Major Facilitator Superfamily IOD65_14805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_14805 PF03466 LysR substrate binding domain IOD65_14815 PF01263 Aldose 1-epimerase IOD65_14820 PF07690 Major Facilitator Superfamily IOD65_14825 PF02311 AraC-like ligand binding domain IOD65_14825 PF12833 Helix-turn-helix domain IOD65_14830 PF04960 Glutaminase IOD65_14835 PF01327 Polypeptide deformylase IOD65_14840 PF07690 Major Facilitator Superfamily IOD65_14850 PF00205 Thiamine pyrophosphate enzyme, central domain IOD65_14850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IOD65_14850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IOD65_14855 PF00171 Aldehyde dehydrogenase family IOD65_14860 PF03447 Homoserine dehydrogenase, NAD binding domain IOD65_14860 PF01958 Domain of unknown function DUF108 IOD65_14870 PF12697 Alpha/beta hydrolase family IOD65_14880 PF07690 Major Facilitator Superfamily IOD65_14885 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_14885 PF14759 Reductase C-terminal IOD65_14890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IOD65_14900 PF00355 Rieske [2Fe-2S] domain IOD65_14910 PF00355 Rieske [2Fe-2S] domain IOD65_14915 PF01614 Bacterial transcriptional regulator IOD65_14915 PF09339 IclR helix-turn-helix domain IOD65_14930 PF00378 Enoyl-CoA hydratase/isomerase IOD65_14940 PF00535 Glycosyl transferase family 2 IOD65_14945 PF14883 Hypothetical glycosyl hydrolase family 13 IOD65_14945 PF01522 Polysaccharide deacetylase IOD65_14950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IOD65_14955 PF07152 YaeQ protein IOD65_14960 PF00375 Sodium:dicarboxylate symporter family IOD65_14965 PF07683 Cobalamin synthesis protein cobW C-terminal domain IOD65_14965 PF02492 CobW/HypB/UreG, nucleotide-binding domain IOD65_14975 PF03061 Thioesterase superfamily IOD65_14985 PF02028 BCCT, betaine/carnitine/choline family transporter IOD65_14990 PF02028 BCCT, betaine/carnitine/choline family transporter IOD65_14995 PF00440 Bacterial regulatory proteins, tetR family IOD65_14995 PF13977 BetI-type transcriptional repressor, C-terminal IOD65_15000 PF00171 Aldehyde dehydrogenase family IOD65_15005 PF00732 GMC oxidoreductase IOD65_15005 PF05199 GMC oxidoreductase IOD65_15010 PF06039 Malate:quinone oxidoreductase (Mqo) IOD65_15020 PF02574 Homocysteine S-methyltransferase IOD65_15025 PF13520 Amino acid permease IOD65_15060 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IOD65_15060 PF04717 Type VI secretion system, phage-baseplate injector IOD65_15060 PF13296 Putative type VI secretion system Rhs element Vgr IOD65_15075 PF00701 Dihydrodipicolinate synthetase family IOD65_15080 PF00083 Sugar (and other) transporter IOD65_15110 PF01420 Type I restriction modification DNA specificity domain IOD65_15115 PF02384 N-6 DNA Methylase IOD65_15120 PF04851 Type III restriction enzyme, res subunit IOD65_15120 PF08463 EcoEI R protein C-terminal IOD65_15120 PF00271 Helicase conserved C-terminal domain IOD65_15120 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IOD65_15150 PF07690 Major Facilitator Superfamily IOD65_15155 PF13533 Biotin-lipoyl like IOD65_15160 PF03061 Thioesterase superfamily IOD65_15165 PF00490 Delta-aminolevulinic acid dehydratase IOD65_15170 PF01266 FAD dependent oxidoreductase IOD65_15175 PF01370 NAD dependent epimerase/dehydratase family IOD65_15175 PF08338 Domain of unknown function (DUF1731) IOD65_15195 PF00149 Calcineurin-like phosphoesterase IOD65_15195 PF12320 Type 5 capsule protein repressor C-terminal domain IOD65_15205 PF01168 Alanine racemase, N-terminal domain IOD65_15210 PF00437 Type II/IV secretion system protein IOD65_15215 PF00437 Type II/IV secretion system protein IOD65_15220 PF01475 Ferric uptake regulator family IOD65_15225 PF04355 SmpA / OmlA family IOD65_15230 PF03658 RnfH family Ubiquitin IOD65_15240 PF01814 Hemerythrin HHE cation binding domain IOD65_15245 PF13230 Glutamine amidotransferases class-II IOD65_15255 PF00696 Amino acid kinase family IOD65_15260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IOD65_15260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IOD65_15260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IOD65_15260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IOD65_15265 PF00692 dUTPase IOD65_15270 PF13361 UvrD-like helicase C-terminal domain IOD65_15270 PF00580 UvrD/REP helicase N-terminal domain IOD65_15275 PF13488 Glycine zipper IOD65_15275 PF00691 OmpA family IOD65_15280 PF01553 Acyltransferase IOD65_15290 PF03775 Septum formation inhibitor MinC, C-terminal domain IOD65_15295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IOD65_15300 PF03776 Septum formation topological specificity factor MinE IOD65_15310 PF01810 LysE type translocator IOD65_15315 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IOD65_15315 PF09397 Ftsk gamma domain IOD65_15315 PF17854 FtsK alpha domain IOD65_15315 PF01580 FtsK/SpoIIIE family IOD65_15320 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_15325 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IOD65_15330 PF04376 Arginine-tRNA-protein transferase, N terminus IOD65_15330 PF04377 Arginine-tRNA-protein transferase, C terminus IOD65_15335 PF00583 Acetyltransferase (GNAT) family IOD65_15350 PF00009 Elongation factor Tu GTP binding domain IOD65_15350 PF03144 Elongation factor Tu domain 2 IOD65_15350 PF03143 Elongation factor Tu C-terminal domain IOD65_15355 PF00679 Elongation factor G C-terminus IOD65_15355 PF14492 Elongation Factor G, domain II IOD65_15355 PF03764 Elongation factor G, domain IV IOD65_15355 PF03144 Elongation factor Tu domain 2 IOD65_15355 PF00009 Elongation factor Tu GTP binding domain IOD65_15360 PF00177 Ribosomal protein S7p/S5e IOD65_15365 PF00164 Ribosomal protein S12/S23 IOD65_15375 PF02801 Beta-ketoacyl synthase, C-terminal domain IOD65_15375 PF00109 Beta-ketoacyl synthase, N-terminal domain IOD65_15380 PF03653 Uncharacterised protein family (UPF0093) IOD65_15390 PF00795 Carbon-nitrogen hydrolase IOD65_15390 PF02540 NAD synthase IOD65_15405 PF00970 Oxidoreductase FAD-binding domain IOD65_15405 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD65_15405 PF00175 Oxidoreductase NAD-binding domain IOD65_15410 PF00171 Aldehyde dehydrogenase family IOD65_15415 PF00355 Rieske [2Fe-2S] domain IOD65_15415 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IOD65_15420 PF07859 alpha/beta hydrolase fold IOD65_15425 PF02028 BCCT, betaine/carnitine/choline family transporter IOD65_15430 PF00180 Isocitrate/isopropylmalate dehydrogenase IOD65_15435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_15435 PF03466 LysR substrate binding domain IOD65_15455 PF00037 4Fe-4S binding domain IOD65_15460 PF01467 Cytidylyltransferase-like IOD65_15465 PF01668 SmpB protein IOD65_15470 PF03358 NADPH-dependent FMN reductase IOD65_15475 PF02578 Multi-copper polyphenol oxidoreductase laccase IOD65_15480 PF00849 RNA pseudouridylate synthase IOD65_15480 PF01479 S4 domain IOD65_15485 PF13525 Outer membrane lipoprotein IOD65_15490 PF08278 DNA primase DnaG DnaB-binding IOD65_15490 PF10410 DnaB-helicase binding domain of primase IOD65_15490 PF08275 DNA primase catalytic core, N-terminal domain IOD65_15490 PF01807 CHC2 zinc finger IOD65_15495 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IOD65_15495 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IOD65_15495 PF01488 Shikimate / quinate 5-dehydrogenase IOD65_15505 PF03550 Outer membrane lipoprotein LolB IOD65_15510 PF00288 GHMP kinases N terminal domain IOD65_15510 PF08544 GHMP kinases C terminal IOD65_15535 PF14572 Phosphoribosyl synthetase-associated domain IOD65_15535 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IOD65_15540 PF01386 Ribosomal L25p family IOD65_15545 PF01195 Peptidyl-tRNA hydrolase IOD65_15550 PF02261 Aspartate decarboxylase IOD65_15565 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IOD65_15575 PF03070 TENA/THI-4/PQQC family IOD65_15575 PF08543 Phosphomethylpyrimidine kinase IOD65_15575 PF02581 Thiamine monophosphate synthase IOD65_15580 PF01476 LysM domain IOD65_15580 PF04972 BON domain IOD65_15585 PF00550 Phosphopantetheine attachment site IOD65_15595 PF00698 Acyl transferase domain IOD65_15600 PF01783 Ribosomal L32p protein family IOD65_15605 PF02620 Large ribosomal RNA subunit accumulation protein YceD IOD65_15610 PF04315 Elongation factor P hydroxylase IOD65_15615 PF01300 Telomere recombination IOD65_15620 PF02616 Segregation and condensation protein ScpA IOD65_15625 PF04079 Segregation and condensation complex subunit ScpB IOD65_15630 PF00849 RNA pseudouridylate synthase IOD65_15630 PF01479 S4 domain IOD65_15645 PF00155 Aminotransferase class I and II IOD65_15650 PF04055 Radical SAM superfamily IOD65_15650 PF06968 Biotin and Thiamin Synthesis associated domain IOD65_15650 PF00202 Aminotransferase class-III IOD65_15655 PF08241 Methyltransferase domain IOD65_15655 PF12697 Alpha/beta hydrolase family IOD65_15660 PF02358 Trehalose-phosphatase IOD65_15665 PF00982 Glycosyltransferase family 20 IOD65_15670 PF07690 Major Facilitator Superfamily IOD65_15675 PF00210 Ferritin-like domain IOD65_15680 PF00533 BRCA1 C Terminus (BRCT) domain IOD65_15680 PF12826 Helix-hairpin-helix motif IOD65_15680 PF03120 NAD-dependent DNA ligase OB-fold domain IOD65_15680 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IOD65_15680 PF01653 NAD-dependent DNA ligase adenylation domain IOD65_15690 PF02463 RecF/RecN/SMC N terminal domain IOD65_15690 PF06470 SMC proteins Flexible Hinge Domain IOD65_15700 PF01925 Sulfite exporter TauE/SafE IOD65_15710 PF03309 Type III pantothenate kinase IOD65_15715 PF00448 SRP54-type protein, GTPase domain IOD65_15715 PF02881 SRP54-type protein, helical bundle domain IOD65_15715 PF02978 Signal peptide binding domain IOD65_15725 PF01207 Dihydrouridine synthase (Dus) IOD65_15755 PF00692 dUTPase IOD65_15770 PF01048 Phosphorylase superfamily IOD65_15775 PF10609 NUBPL iron-transfer P-loop NTPase IOD65_15785 PF01588 Putative tRNA binding domain IOD65_15785 PF09334 tRNA synthetases class I (M) IOD65_15815 PF13533 Biotin-lipoyl like IOD65_15820 PF00291 Pyridoxal-phosphate dependent enzyme IOD65_15835 PF05552 Conserved TM helix IOD65_15850 PF00175 Oxidoreductase NAD-binding domain IOD65_15850 PF00970 Oxidoreductase FAD-binding domain IOD65_15855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_15855 PF03466 LysR substrate binding domain IOD65_15860 PF00313 'Cold-shock' DNA-binding domain IOD65_15870 PF00361 Proton-conducting membrane transporter IOD65_15875 PF00361 Proton-conducting membrane transporter IOD65_15880 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IOD65_15880 PF00361 Proton-conducting membrane transporter IOD65_15885 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IOD65_15890 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IOD65_15895 PF12838 4Fe-4S dicluster domain IOD65_15900 PF00146 NADH dehydrogenase IOD65_15905 PF00384 Molybdopterin oxidoreductase IOD65_15905 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IOD65_15905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IOD65_15910 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IOD65_15910 PF10531 SLBB domain IOD65_15910 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IOD65_15920 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IOD65_15920 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IOD65_15925 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IOD65_15930 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IOD65_15935 PF00990 Diguanylate cyclase, GGDEF domain IOD65_15945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_15945 PF00672 HAMP domain IOD65_15945 PF00512 His Kinase A (phospho-acceptor) domain IOD65_15950 PF00072 Response regulator receiver domain IOD65_15950 PF00486 Transcriptional regulatory protein, C terminal IOD65_15955 PF00317 Ribonucleotide reductase, all-alpha domain IOD65_15955 PF02867 Ribonucleotide reductase, barrel domain IOD65_15955 PF03477 ATP cone domain IOD65_15965 PF00268 Ribonucleotide reductase, small chain IOD65_15975 PF13936 Helix-turn-helix domain IOD65_15975 PF00665 Integrase core domain IOD65_16010 PF00132 Bacterial transferase hexapeptide (six repeats) IOD65_16015 PF09318 Glycosyl transferase 1 domain A IOD65_16015 PF00534 Glycosyl transferases group 1 IOD65_16035 PF03412 Peptidase C39 family IOD65_16035 PF00005 ABC transporter IOD65_16035 PF00664 ABC transporter transmembrane region IOD65_16040 PF02321 Outer membrane efflux protein IOD65_16045 PF13737 Transposase DDE domain IOD65_16055 PF17074 Darcynin, domain of unknown function IOD65_16075 PF13737 Transposase DDE domain IOD65_16080 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IOD65_16080 PF06594 Haemolysin-type calcium binding protein related domain IOD65_16105 PF01613 Flavin reductase like domain IOD65_16110 PF01717 Cobalamin-independent synthase, Catalytic domain IOD65_16110 PF08267 Cobalamin-independent synthase, N-terminal domain IOD65_16120 PF03466 LysR substrate binding domain IOD65_16120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_16125 PF01810 LysE type translocator IOD65_16135 PF01970 Tripartite tricarboxylate transporter TctA family IOD65_16150 PF03466 LysR substrate binding domain IOD65_16150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_16155 PF07690 Major Facilitator Superfamily IOD65_16165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_16165 PF03466 LysR substrate binding domain IOD65_16170 PF00890 FAD binding domain IOD65_16170 PF14537 Cytochrome c3 IOD65_16185 PF17932 Tetracyclin repressor-like, C-terminal domain IOD65_16185 PF00440 Bacterial regulatory proteins, tetR family IOD65_16195 PF02515 CoA-transferase family III IOD65_16200 PF07690 Major Facilitator Superfamily IOD65_16205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_16205 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_16205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IOD65_16210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_16210 PF03466 LysR substrate binding domain IOD65_16215 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_16215 PF00107 Zinc-binding dehydrogenase IOD65_16220 PF00962 Adenosine/AMP deaminase IOD65_16245 PF02445 Quinolinate synthetase A protein IOD65_16250 PF01960 ArgJ family IOD65_16255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IOD65_16255 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IOD65_16260 PF00893 Small Multidrug Resistance protein IOD65_16275 PF07732 Multicopper oxidase IOD65_16275 PF07731 Multicopper oxidase IOD65_16275 PF00394 Multicopper oxidase IOD65_16290 PF00834 Ribulose-phosphate 3 epimerase family IOD65_16300 PF00756 Putative esterase IOD65_16310 PF04445 Putative SAM-dependent methyltransferase IOD65_16315 PF00814 Glycoprotease family IOD65_16320 PF00132 Bacterial transferase hexapeptide (six repeats) IOD65_16325 PF00293 NUDIX domain IOD65_16365 PF04715 Anthranilate synthase component I, N terminal region IOD65_16365 PF00425 chorismate binding enzyme IOD65_16370 PF00155 Aminotransferase class I and II IOD65_16375 PF00815 Histidinol dehydrogenase IOD65_16380 PF01634 ATP phosphoribosyltransferase IOD65_16385 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IOD65_16390 PF01722 BolA-like protein IOD65_16395 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IOD65_16400 PF04552 Sigma-54, DNA binding domain IOD65_16400 PF04963 Sigma-54 factor, core binding domain IOD65_16400 PF00309 Sigma-54 factor, Activator interacting domain (AID) IOD65_16445 PF00795 Carbon-nitrogen hydrolase IOD65_16455 PF01047 MarR family IOD65_16460 PF02566 OsmC-like protein IOD65_16465 PF00437 Type II/IV secretion system protein IOD65_16485 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IOD65_16485 PF01367 5'-3' exonuclease, C-terminal SAM fold IOD65_16485 PF00476 DNA polymerase family A IOD65_16485 PF01612 3'-5' exonuclease IOD65_16490 PF02325 YGGT family IOD65_16495 PF03807 NADP oxidoreductase coenzyme F420-dependent IOD65_16495 PF14748 Pyrroline-5-carboxylate reductase dimerisation IOD65_16500 PF09179 TilS substrate binding domain IOD65_16500 PF01171 PP-loop family IOD65_16500 PF11734 TilS substrate C-terminal domain IOD65_16505 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IOD65_16510 PF02541 Ppx/GppA phosphatase family IOD65_16515 PF00085 Thioredoxin IOD65_16520 PF07498 Rho termination factor, N-terminal domain IOD65_16520 PF07497 Rho termination factor, RNA-binding domain IOD65_16520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IOD65_16535 PF00216 Bacterial DNA-binding protein IOD65_16540 PF01588 Putative tRNA binding domain IOD65_16540 PF03484 tRNA synthetase B5 domain IOD65_16540 PF03483 B3/4 domain IOD65_16540 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IOD65_16540 PF03147 Ferredoxin-fold anticodon binding domain IOD65_16545 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IOD65_16545 PF01409 tRNA synthetases class II core domain (F) IOD65_16555 PF00453 Ribosomal protein L20 IOD65_16560 PF01632 Ribosomal protein L35 IOD65_16585 PF09335 SNARE associated Golgi protein IOD65_16590 PF00043 Glutathione S-transferase, C-terminal domain IOD65_16590 PF02798 Glutathione S-transferase, N-terminal domain IOD65_16595 PF00707 Translation initiation factor IF-3, C-terminal domain IOD65_16595 PF05198 Translation initiation factor IF-3, N-terminal domain IOD65_16600 PF02824 TGS domain IOD65_16600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IOD65_16600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IOD65_16600 PF03129 Anticodon binding domain IOD65_16605 PF00501 AMP-binding enzyme IOD65_16605 PF13193 AMP-binding enzyme C-terminal domain IOD65_16610 PF04751 Protein of unknown function (DUF615) IOD65_16615 PF00381 PTS HPr component phosphorylation site IOD65_16620 PF03668 P-loop ATPase protein family IOD65_16625 PF02569 Pantoate-beta-alanine ligase IOD65_16630 PF02548 Ketopantoate hydroxymethyltransferase IOD65_16635 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IOD65_16640 PF12626 Polymerase A arginine-rich C-terminus IOD65_16640 PF12627 Probable RNA and SrmB- binding site of polymerase A IOD65_16640 PF01743 Poly A polymerase head domain IOD65_16650 PF03819 MazG nucleotide pyrophosphohydrolase domain IOD65_16655 PF00106 short chain dehydrogenase IOD65_16660 PF13291 ACT domain IOD65_16660 PF02824 TGS domain IOD65_16660 PF04607 Region found in RelA / SpoT proteins IOD65_16665 PF05958 tRNA (Uracil-5-)-methyltransferase IOD65_16675 PF00291 Pyridoxal-phosphate dependent enzyme IOD65_16680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_16680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IOD65_16680 PF00512 His Kinase A (phospho-acceptor) domain IOD65_16680 PF01627 Hpt domain IOD65_16680 PF00672 HAMP domain IOD65_16680 PF00072 Response regulator receiver domain IOD65_16685 PF00378 Enoyl-CoA hydratase/isomerase IOD65_16690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IOD65_16690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IOD65_16695 PF01261 Xylose isomerase-like TIM barrel IOD65_16715 PF02233 NAD(P) transhydrogenase beta subunit IOD65_16720 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IOD65_16725 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IOD65_16725 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IOD65_16730 PF00892 EamA-like transporter family IOD65_16740 PF07690 Major Facilitator Superfamily IOD65_16775 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_16780 PF03358 NADPH-dependent FMN reductase IOD65_16785 PF01758 Sodium Bile acid symporter family IOD65_16795 PF01022 Bacterial regulatory protein, arsR family IOD65_16800 PF03960 ArsC family IOD65_16805 PF13411 MerR HTH family regulatory protein IOD65_16820 PF07664 Ferrous iron transport protein B C terminus IOD65_16820 PF07670 Nucleoside recognition IOD65_16820 PF02421 Ferrous iron transport protein B IOD65_16830 PF00873 AcrB/AcrD/AcrF family IOD65_16835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IOD65_16855 PF07732 Multicopper oxidase IOD65_16855 PF07731 Multicopper oxidase IOD65_16855 PF00394 Multicopper oxidase IOD65_16865 PF00072 Response regulator receiver domain IOD65_16865 PF00486 Transcriptional regulatory protein, C terminal IOD65_16870 PF00512 His Kinase A (phospho-acceptor) domain IOD65_16870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_16870 PF00672 HAMP domain IOD65_16875 PF04945 YHS domain IOD65_16890 PF13936 Helix-turn-helix domain IOD65_16890 PF00665 Integrase core domain IOD65_16955 PF00589 Phage integrase family IOD65_16960 PF01207 Dihydrouridine synthase (Dus) IOD65_16970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_16970 PF03466 LysR substrate binding domain IOD65_16980 PF00899 ThiF family IOD65_16985 PF00330 Aconitase family (aconitate hydratase) IOD65_16985 PF00694 Aconitase C-terminal domain IOD65_16990 PF01026 TatD related DNase IOD65_17005 PF00009 Elongation factor Tu GTP binding domain IOD65_17005 PF16658 Class II release factor RF3, C-terminal domain IOD65_17005 PF03144 Elongation factor Tu domain 2 IOD65_17020 PF00990 Diguanylate cyclase, GGDEF domain IOD65_17020 PF00563 EAL domain IOD65_17020 PF03707 Bacterial signalling protein N terminal repeat IOD65_17025 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IOD65_17025 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IOD65_17030 PF10369 Small subunit of acetolactate synthase IOD65_17035 PF00205 Thiamine pyrophosphate enzyme, central domain IOD65_17035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IOD65_17035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IOD65_17040 PF08264 Anticodon-binding domain of tRNA IOD65_17040 PF09334 tRNA synthetases class I (M) IOD65_17040 PF13603 Leucyl-tRNA synthetase, Domain 2 IOD65_17040 PF00133 tRNA synthetases class I (I, L, M and V) IOD65_17055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IOD65_17060 PF12704 MacB-like periplasmic core domain IOD65_17060 PF00005 ABC transporter IOD65_17060 PF02687 FtsX-like permease family IOD65_17065 PF02321 Outer membrane efflux protein IOD65_17080 PF00929 Exonuclease IOD65_17085 PF03193 RsgA GTPase IOD65_17095 PF00462 Glutaredoxin IOD65_17100 PF02556 Preprotein translocase subunit SecB IOD65_17110 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IOD65_17110 PF01926 50S ribosome-binding GTPase IOD65_17115 PF01011 PQQ enzyme repeat IOD65_17115 PF13360 PQQ-like domain IOD65_17125 PF13393 Histidyl-tRNA synthetase IOD65_17125 PF03129 Anticodon binding domain IOD65_17130 PF04551 GcpE protein IOD65_17135 PF13464 Domain of unknown function (DUF4115) IOD65_17145 PF04055 Radical SAM superfamily IOD65_17150 PF00334 Nucleoside diphosphate kinase IOD65_17155 PF04384 Iron-sulphur cluster assembly IOD65_17160 PF01569 PAP2 superfamily IOD65_17165 PF13439 Glycosyltransferase Family 4 IOD65_17165 PF00534 Glycosyl transferases group 1 IOD65_17170 PF11818 C-terminal domain of tail specific protease (DUF3340) IOD65_17170 PF03572 Peptidase family S41 IOD65_17170 PF17804 Tail specific protease N-terminal domain IOD65_17170 PF00595 PDZ domain IOD65_17175 PF00933 Glycosyl hydrolase family 3 N terminal domain IOD65_17185 PF00561 alpha/beta hydrolase fold IOD65_17190 PF00171 Aldehyde dehydrogenase family IOD65_17195 PF00171 Aldehyde dehydrogenase family IOD65_17200 PF01202 Shikimate kinase IOD65_17205 PF02447 GntP family permease IOD65_17210 PF01081 KDPG and KHG aldolase IOD65_17215 PF00920 Dehydratase family IOD65_17225 PF00871 Acetokinase family IOD65_17230 PF07085 DRTGG domain IOD65_17230 PF01515 Phosphate acetyl/butaryl transferase IOD65_17235 PF05683 Fumarase C-terminus IOD65_17235 PF05681 Fumarate hydratase (Fumerase) IOD65_17250 PF06689 ClpX C4-type zinc finger IOD65_17250 PF07724 AAA domain (Cdc48 subfamily) IOD65_17250 PF10431 C-terminal, D2-small domain, of ClpB protein IOD65_17255 PF00574 Clp protease IOD65_17260 PF05697 Bacterial trigger factor protein (TF) IOD65_17260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IOD65_17260 PF05698 Bacterial trigger factor protein (TF) C-terminus IOD65_17265 PF00593 TonB dependent receptor IOD65_17265 PF07715 TonB-dependent Receptor Plug Domain IOD65_17270 PF13640 2OG-Fe(II) oxygenase superfamily IOD65_17270 PF18331 PKHD-type hydroxylase C-terminal domain IOD65_17275 PF00682 HMGL-like IOD65_17275 PF08502 LeuA allosteric (dimerisation) domain IOD65_17280 PF00561 alpha/beta hydrolase fold IOD65_17285 PF07021 Methionine biosynthesis protein MetW IOD65_17285 PF00561 alpha/beta hydrolase fold IOD65_17295 PF01725 Ham1 family IOD65_17305 PF02416 mttA/Hcf106 family IOD65_17310 PF02416 mttA/Hcf106 family IOD65_17315 PF00902 Sec-independent protein translocase protein (TatC) IOD65_17335 PF01790 Prolipoprotein diacylglyceryl transferase IOD65_17350 PF00303 Thymidylate synthase IOD65_17355 PF00186 Dihydrofolate reductase IOD65_17365 PF01625 Peptide methionine sulfoxide reductase IOD65_17375 PF01618 MotA/TolQ/ExbB proton channel family IOD65_17385 PF00551 Formyl transferase IOD65_17385 PF01842 ACT domain IOD65_17395 PF00171 Aldehyde dehydrogenase family IOD65_17400 PF00830 Ribosomal L28 family IOD65_17405 PF00471 Ribosomal protein L33 IOD65_17410 PF02254 TrkA-N domain IOD65_17410 PF00999 Sodium/hydrogen exchanger family IOD65_17430 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) IOD65_17435 PF00580 UvrD/REP helicase N-terminal domain IOD65_17435 PF13361 UvrD-like helicase C-terminal domain IOD65_17450 PF01396 Topoisomerase DNA binding C4 zinc finger IOD65_17450 PF01131 DNA topoisomerase IOD65_17450 PF08272 Topoisomerase I zinc-ribbon-like IOD65_17450 PF01751 Toprim domain IOD65_17460 PF01638 HxlR-like helix-turn-helix IOD65_17465 PF00107 Zinc-binding dehydrogenase IOD65_17465 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_17470 PF04102 SlyX IOD65_17475 PF00005 ABC transporter IOD65_17475 PF16326 ABC transporter C-terminal domain IOD65_17475 PF12848 ABC transporter IOD65_17485 PF03279 Bacterial lipid A biosynthesis acyltransferase IOD65_17495 PF00375 Sodium:dicarboxylate symporter family IOD65_17505 PF02774 Semialdehyde dehydrogenase, dimerisation domain IOD65_17505 PF01118 Semialdehyde dehydrogenase, NAD binding domain IOD65_17525 PF01416 tRNA pseudouridine synthase IOD65_17535 PF01176 Translation initiation factor 1A / IF-1 IOD65_17550 PF00180 Isocitrate/isopropylmalate dehydrogenase IOD65_17560 PF00694 Aconitase C-terminal domain IOD65_17565 PF00330 Aconitase family (aconitate hydratase) IOD65_17575 PF03466 LysR substrate binding domain IOD65_17575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_17595 PF00293 NUDIX domain IOD65_17600 PF00391 PEP-utilising enzyme, mobile domain IOD65_17600 PF05524 PEP-utilising enzyme, N-terminal IOD65_17600 PF01590 GAF domain IOD65_17600 PF02896 PEP-utilising enzyme, TIM barrel domain IOD65_17605 PF00141 Peroxidase IOD65_17610 PF12706 Beta-lactamase superfamily domain IOD65_17615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_17615 PF03466 LysR substrate binding domain IOD65_17625 PF02798 Glutathione S-transferase, N-terminal domain IOD65_17630 PF08279 HTH domain IOD65_17630 PF13280 WYL domain IOD65_17635 PF13419 Haloacid dehalogenase-like hydrolase IOD65_17640 PF00849 RNA pseudouridylate synthase IOD65_17640 PF01479 S4 domain IOD65_17645 PF10150 Ribonuclease E/G family IOD65_17645 PF00575 S1 RNA binding domain IOD65_17645 PF12111 Polyribonucleotide phosphorylase C terminal IOD65_17650 PF00501 AMP-binding enzyme IOD65_17650 PF13193 AMP-binding enzyme C-terminal domain IOD65_17665 PF03466 LysR substrate binding domain IOD65_17665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_17675 PF04055 Radical SAM superfamily IOD65_17675 PF06969 HemN C-terminal domain IOD65_17685 PF01554 MatE IOD65_17690 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IOD65_17690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_17690 PF02770 Acyl-CoA dehydrogenase, middle domain IOD65_17695 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IOD65_17695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IOD65_17700 PF03109 ABC1 family IOD65_17705 PF01197 Ribosomal protein L31 IOD65_17715 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IOD65_17725 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_17725 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IOD65_17735 PF03884 DNA gyrase inhibitor YacG IOD65_17740 PF00753 Metallo-beta-lactamase superfamily IOD65_17745 PF00762 Ferrochelatase IOD65_17755 PF01177 Asp/Glu/Hydantoin racemase IOD65_17775 PF01206 Sulfurtransferase TusA IOD65_17780 PF03471 Transporter associated domain IOD65_17780 PF00571 CBS domain IOD65_17785 PF00795 Carbon-nitrogen hydrolase IOD65_17790 PF01588 Putative tRNA binding domain IOD65_17800 PF07963 Prokaryotic N-terminal methylation motif IOD65_17800 PF08334 Type II secretion system (T2SS), protein G IOD65_17805 PF00482 Type II secretion system (T2SS), protein F IOD65_17810 PF17764 3′ DNA-binding domain (3′BD) IOD65_17810 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IOD65_17810 PF00270 DEAD/DEAH box helicase IOD65_17810 PF18074 Primosomal protein N C-terminal domain IOD65_17810 PF00271 Helicase conserved C-terminal domain IOD65_17815 PF00999 Sodium/hydrogen exchanger family IOD65_17815 PF02254 TrkA-N domain IOD65_17820 PF01430 Hsp33 protein IOD65_17830 PF01556 DnaJ C terminal domain IOD65_17830 PF00226 DnaJ domain IOD65_17840 PF01544 CorA-like Mg2+ transporter protein IOD65_17845 PF03725 3' exoribonuclease family, domain 2 IOD65_17845 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IOD65_17845 PF00575 S1 RNA binding domain IOD65_17845 PF00013 KH domain IOD65_17845 PF01138 3' exoribonuclease family, domain 1 IOD65_17850 PF00312 Ribosomal protein S15 IOD65_17855 PF00144 Beta-lactamase IOD65_17860 PF13538 UvrD-like helicase C-terminal domain IOD65_17865 PF00580 UvrD/REP helicase N-terminal domain IOD65_17865 PF13361 UvrD-like helicase C-terminal domain IOD65_17865 PF12705 PD-(D/E)XK nuclease superfamily IOD65_17870 PF17946 RecC C-terminal domain IOD65_17880 PF03976 Polyphosphate kinase 2 (PPK2) IOD65_17890 PF01209 ubiE/COQ5 methyltransferase family IOD65_17900 PF03109 ABC1 family IOD65_17910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IOD65_17915 PF01502 Phosphoribosyl-AMP cyclohydrolase IOD65_17930 PF13244 Domain of unknown function (DUF4040) IOD65_17930 PF00361 Proton-conducting membrane transporter IOD65_17930 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IOD65_17930 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IOD65_17935 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IOD65_17940 PF00361 Proton-conducting membrane transporter IOD65_17945 PF01899 Na+/H+ ion antiporter subunit IOD65_17950 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) IOD65_17955 PF03334 Na+/H+ antiporter subunit IOD65_17960 PF02033 Ribosome-binding factor A IOD65_17965 PF04760 Translation initiation factor IF-2, N-terminal region IOD65_17965 PF08364 Bacterial translation initiation factor IF-2 associated region IOD65_17965 PF11987 Translation-initiation factor 2 IOD65_17965 PF00009 Elongation factor Tu GTP binding domain IOD65_17970 PF13184 NusA-like KH domain IOD65_17970 PF00575 S1 RNA binding domain IOD65_17970 PF08529 NusA N-terminal domain IOD65_17975 PF02576 RimP N-terminal domain IOD65_17975 PF17384 RimP C-terminal SH3 domain IOD65_17995 PF03840 Preprotein translocase SecG subunit IOD65_18000 PF00121 Triosephosphate isomerase IOD65_18005 PF00437 Type II/IV secretion system protein IOD65_18005 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IOD65_18010 PF00482 Type II secretion system (T2SS), protein F IOD65_18015 PF06750 Bacterial Peptidase A24 N-terminal domain IOD65_18015 PF01478 Type IV leader peptidase family IOD65_18020 PF01121 Dephospho-CoA kinase IOD65_18030 PF08032 RNA 2'-O ribose methyltransferase substrate binding IOD65_18030 PF00588 SpoU rRNA Methylase family IOD65_18035 PF06865 Pyrimidine/purine nucleoside phosphorylase IOD65_18045 PF02463 RecF/RecN/SMC N terminal domain IOD65_18050 PF02622 Uncharacterized ACR, COG1678 IOD65_18055 PF03652 Holliday junction resolvase IOD65_18060 PF13533 Biotin-lipoyl like IOD65_18090 PF12833 Helix-turn-helix domain IOD65_18090 PF02805 Metal binding domain of Ada IOD65_18090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IOD65_18090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IOD65_18095 PF01066 CDP-alcohol phosphatidyltransferase IOD65_18105 PF08459 UvrC Helix-hairpin-helix N-terminal IOD65_18105 PF02151 UvrB/uvrC motif IOD65_18105 PF01541 GIY-YIG catalytic domain IOD65_18120 PF13737 Transposase DDE domain IOD65_18140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IOD65_18140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IOD65_18140 PF00378 Enoyl-CoA hydratase/isomerase IOD65_18145 PF00108 Thiolase, N-terminal domain IOD65_18145 PF02803 Thiolase, C-terminal domain IOD65_18160 PF09278 MerR, DNA binding IOD65_18160 PF00376 MerR family regulatory protein IOD65_18170 PF01323 DSBA-like thioredoxin domain IOD65_18185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_18185 PF00183 Hsp90 protein IOD65_18195 PF13737 Transposase DDE domain IOD65_18205 PF13726 Na+-H+ antiporter family IOD65_18205 PF03553 Na+/H+ antiporter family IOD65_18230 PF05000 RNA polymerase Rpb1, domain 4 IOD65_18230 PF04983 RNA polymerase Rpb1, domain 3 IOD65_18230 PF04998 RNA polymerase Rpb1, domain 5 IOD65_18230 PF00623 RNA polymerase Rpb1, domain 2 IOD65_18230 PF04997 RNA polymerase Rpb1, domain 1 IOD65_18235 PF04563 RNA polymerase beta subunit IOD65_18235 PF00562 RNA polymerase Rpb2, domain 6 IOD65_18235 PF10385 RNA polymerase beta subunit external 1 domain IOD65_18235 PF04561 RNA polymerase Rpb2, domain 2 IOD65_18235 PF04565 RNA polymerase Rpb2, domain 3 IOD65_18235 PF04560 RNA polymerase Rpb2, domain 7 IOD65_18240 PF00542 Ribosomal protein L7/L12 C-terminal domain IOD65_18240 PF16320 Ribosomal protein L7/L12 dimerisation domain IOD65_18245 PF00466 Ribosomal protein L10 IOD65_18250 PF00687 Ribosomal protein L1p/L10e family IOD65_18255 PF03946 Ribosomal protein L11, N-terminal domain IOD65_18255 PF00298 Ribosomal protein L11, RNA binding domain IOD65_18260 PF02357 Transcription termination factor nusG IOD65_18260 PF00467 KOW motif IOD65_18265 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IOD65_18275 PF03143 Elongation factor Tu C-terminal domain IOD65_18275 PF03144 Elongation factor Tu domain 2 IOD65_18275 PF00009 Elongation factor Tu GTP binding domain IOD65_18300 PF00425 chorismate binding enzyme IOD65_18300 PF04715 Anthranilate synthase component I, N terminal region IOD65_18305 PF13419 Haloacid dehalogenase-like hydrolase IOD65_18310 PF00498 FHA domain IOD65_18310 PF12401 Protein of unknown function (DUF2662) IOD65_18315 PF03958 Bacterial type II/III secretion system short domain IOD65_18315 PF00263 Bacterial type II and III secretion system protein IOD65_18330 PF00816 H-NS histone family IOD65_18355 PF03900 Porphobilinogen deaminase, C-terminal domain IOD65_18355 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IOD65_18360 PF00072 Response regulator receiver domain IOD65_18360 PF04397 LytTr DNA-binding domain IOD65_18365 PF07694 5TMR of 5TMR-LYT IOD65_18365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_18365 PF06580 Histidine kinase IOD65_18370 PF00206 Lyase IOD65_18370 PF14698 Argininosuccinate lyase C-terminal IOD65_18375 PF04362 Bacterial Fe(2+) trafficking IOD65_18380 PF01895 PhoU domain IOD65_18385 PF02321 Outer membrane efflux protein IOD65_18395 PF00892 EamA-like transporter family IOD65_18410 PF13667 ThiC-associated domain IOD65_18410 PF01964 Radical SAM ThiC family IOD65_18415 PF00293 NUDIX domain IOD65_18420 PF00149 Calcineurin-like phosphoesterase IOD65_18425 PF01258 Prokaryotic dksA/traR C4-type zinc finger IOD65_18430 PF00749 tRNA synthetases class I (E and Q), catalytic domain IOD65_18435 PF01098 Cell cycle protein IOD65_18440 PF08245 Mur ligase middle domain IOD65_18440 PF02875 Mur ligase family, glutamate ligase domain IOD65_18450 PF07670 Nucleoside recognition IOD65_18450 PF02421 Ferrous iron transport protein B IOD65_18450 PF07664 Ferrous iron transport protein B C terminus IOD65_18460 PF00589 Phage integrase family IOD65_18460 PF02899 Phage integrase, N-terminal SAM-like domain IOD65_18465 PF13098 Thioredoxin-like domain IOD65_18465 PF10411 Disulfide bond isomerase protein N-terminus IOD65_18470 PF03447 Homoserine dehydrogenase, NAD binding domain IOD65_18470 PF01842 ACT domain IOD65_18470 PF00742 Homoserine dehydrogenase IOD65_18475 PF00291 Pyridoxal-phosphate dependent enzyme IOD65_18480 PF00768 D-alanyl-D-alanine carboxypeptidase IOD65_18485 PF00072 Response regulator receiver domain IOD65_18485 PF00196 Bacterial regulatory proteins, luxR family IOD65_18490 PF00512 His Kinase A (phospho-acceptor) domain IOD65_18490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IOD65_18495 PF02954 Bacterial regulatory protein, Fis family IOD65_18495 PF00072 Response regulator receiver domain IOD65_18495 PF00158 Sigma-54 interaction domain IOD65_18500 PF03572 Peptidase family S41 IOD65_18500 PF00595 PDZ domain IOD65_18505 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IOD65_18505 PF01676 Metalloenzyme superfamily IOD65_18510 PF03739 Lipopolysaccharide export system permease LptF/LptG IOD65_18520 PF00883 Cytosol aminopeptidase family, catalytic domain IOD65_18520 PF02789 Cytosol aminopeptidase family, N-terminal domain IOD65_18540 PF00677 Lumazine binding domain IOD65_18550 PF01872 RibD C-terminal domain IOD65_18550 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IOD65_18555 PF03477 ATP cone domain IOD65_18560 PF00909 Ammonium Transporter Family IOD65_18565 PF00543 Nitrogen regulatory protein P-II IOD65_18575 PF01078 Magnesium chelatase, subunit ChlI IOD65_18575 PF13335 Magnesium chelatase, subunit ChlI C-terminal IOD65_18580 PF03358 NADPH-dependent FMN reductase IOD65_18585 PF00392 Bacterial regulatory proteins, gntR family IOD65_18585 PF00155 Aminotransferase class I and II IOD65_18590 PF00596 Class II Aldolase and Adducin N-terminal domain IOD65_18595 PF00701 Dihydrodipicolinate synthetase family IOD65_18610 PF03573 outer membrane porin, OprD family IOD65_18615 PF00719 Inorganic pyrophosphatase IOD65_18630 PF00501 AMP-binding enzyme IOD65_18630 PF13193 AMP-binding enzyme C-terminal domain IOD65_18635 PF00521 DNA gyrase/topoisomerase IV, subunit A IOD65_18635 PF03989 DNA gyrase C-terminal domain, beta-propeller IOD65_18640 PF07690 Major Facilitator Superfamily IOD65_18645 PF03458 UPF0126 domain IOD65_18650 PF02810 SEC-C motif IOD65_18655 PF03741 Integral membrane protein TerC family IOD65_18655 PF03471 Transporter associated domain IOD65_18660 PF03641 Possible lysine decarboxylase IOD65_18665 PF07690 Major Facilitator Superfamily IOD65_18670 PF01183 Glycosyl hydrolases family 25 IOD65_18675 PF11798 IMS family HHH motif IOD65_18675 PF00817 impB/mucB/samB family IOD65_18675 PF11799 impB/mucB/samB family C-terminal domain IOD65_18695 PF04055 Radical SAM superfamily IOD65_18695 PF11842 Domain of unknown function (DUF3362) IOD65_18695 PF08497 Radical SAM N-terminal IOD65_18715 PF03358 NADPH-dependent FMN reductase IOD65_18730 PF00291 Pyridoxal-phosphate dependent enzyme IOD65_18760 PF00440 Bacterial regulatory proteins, tetR family IOD65_18785 PF01327 Polypeptide deformylase IOD65_18795 PF02481 DNA recombination-mediator protein A IOD65_18795 PF17782 DprA winged helix domain IOD65_18800 PF01300 Telomere recombination IOD65_18805 PF00892 EamA-like transporter family IOD65_18810 PF00440 Bacterial regulatory proteins, tetR family IOD65_18815 PF07690 Major Facilitator Superfamily IOD65_18820 PF13173 AAA domain IOD65_18820 PF13635 Domain of unknown function (DUF4143) IOD65_18830 PF13737 Transposase DDE domain IOD65_18860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_18860 PF03466 LysR substrate binding domain IOD65_18865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IOD65_18865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IOD65_18870 PF00528 Binding-protein-dependent transport system inner membrane component IOD65_18880 PF00005 ABC transporter IOD65_18885 PF13737 Transposase DDE domain IOD65_18900 PF02661 Fic/DOC family IOD65_18925 PF00239 Resolvase, N terminal domain IOD65_18925 PF02796 Helix-turn-helix domain of resolvase IOD65_18930 PF01526 Tn3 transposase DDE domain IOD65_18930 PF13700 Domain of unknown function (DUF4158) IOD65_18955 PF00440 Bacterial regulatory proteins, tetR family IOD65_18955 PF17932 Tetracyclin repressor-like, C-terminal domain IOD65_18970 PF07992 Pyridine nucleotide-disulphide oxidoreductase IOD65_18970 PF14759 Reductase C-terminal IOD65_18975 PF00067 Cytochrome P450 IOD65_18980 PF00111 2Fe-2S iron-sulfur cluster binding domain IOD65_18985 PF02311 AraC-like ligand binding domain IOD65_18985 PF12833 Helix-turn-helix domain IOD65_18990 PF00239 Resolvase, N terminal domain IOD65_18990 PF02796 Helix-turn-helix domain of resolvase IOD65_18995 PF01695 IstB-like ATP binding protein IOD65_19000 PF13610 DDE domain IOD65_19005 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_19005 PF00107 Zinc-binding dehydrogenase IOD65_19010 PF02583 Metal-sensitive transcriptional repressor IOD65_19015 PF13737 Transposase DDE domain IOD65_19020 PF00860 Permease family IOD65_19025 PF00576 HIUase/Transthyretin family IOD65_19050 PF13610 DDE domain IOD65_19055 PF00239 Resolvase, N terminal domain IOD65_19055 PF02796 Helix-turn-helix domain of resolvase IOD65_19065 PF13195 Protein of unknown function (DUF4011) IOD65_19065 PF13086 AAA domain IOD65_19065 PF13087 AAA domain IOD65_19080 PF13737 Transposase DDE domain IOD65_19105 PF13356 Arm DNA-binding domain IOD65_19105 PF00589 Phage integrase family IOD65_19110 PF04151 Bacterial pre-peptidase C-terminal domain IOD65_19120 PF00107 Zinc-binding dehydrogenase IOD65_19120 PF16884 N-terminal domain of oxidoreductase IOD65_19125 PF16925 Tetracyclin repressor-like, C-terminal domain IOD65_19125 PF00440 Bacterial regulatory proteins, tetR family IOD65_19135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IOD65_19145 PF00465 Iron-containing alcohol dehydrogenase IOD65_19160 PF00756 Putative esterase IOD65_19165 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_19165 PF00107 Zinc-binding dehydrogenase IOD65_19170 PF02583 Metal-sensitive transcriptional repressor IOD65_19175 PF00550 Phosphopantetheine attachment site IOD65_19175 PF02801 Beta-ketoacyl synthase, C-terminal domain IOD65_19175 PF14765 Polyketide synthase dehydratase IOD65_19175 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_19175 PF08659 KR domain IOD65_19175 PF00109 Beta-ketoacyl synthase, N-terminal domain IOD65_19175 PF00698 Acyl transferase domain IOD65_19175 PF16197 Ketoacyl-synthetase C-terminal extension IOD65_19180 PF00107 Zinc-binding dehydrogenase IOD65_19180 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_19185 PF03466 LysR substrate binding domain IOD65_19185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IOD65_19190 PF00106 short chain dehydrogenase IOD65_19195 PF08240 Alcohol dehydrogenase GroES-like domain IOD65_19195 PF00107 Zinc-binding dehydrogenase IOD65_19225 PF05973 Phage derived protein Gp49-like (DUF891) IOD65_19260 PF05973 Phage derived protein Gp49-like (DUF891) IOD65_19340 PF02661 Fic/DOC family IOD65_19380 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IOD65_19390 PF13610 DDE domain IOD65_19455 PF00582 Universal stress protein family IOD65_19470 PF01051 Initiator Replication protein IOD65_19485 PF05973 Phage derived protein Gp49-like (DUF891) IOD65_19515 PF01740 STAS domain IOD65_19515 PF00916 Sulfate permease family IOD65_19520 PF00582 Universal stress protein family IOD65_19525 PF03389 MobA/MobL family