locus-tag class description NDN11_00005 IPR003593 AAA+ ATPase domain NDN11_00005 IPR001957 Chromosomal replication control, initiator DnaA NDN11_00005 IPR020591 Chromosomal replication control, initiator DnaA-like NDN11_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site NDN11_00005 IPR013317 Chromosomal replication initiator protein DnaA NDN11_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal NDN11_00005 IPR024633 DnaA N-terminal domain NDN11_00005 IPR038454 DnaA, N-terminal domain superfamily NDN11_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_00005 IPR010921 Trp repressor/replication initiator NDN11_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal NDN11_00010 IPR022637 DNA polymerase III, beta sliding clamp, central NDN11_00010 IPR001001 DNA polymerase III, beta sliding clamp NDN11_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal NDN11_00015 IPR001238 DNA-binding, RecF NDN11_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_00015 IPR003395 RecF/RecN/SMC, N-terminal NDN11_00015 IPR042174 DNA-binding RecF, domain 2 NDN11_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily NDN11_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain NDN11_00020 IPR006171 TOPRIM domain NDN11_00020 IPR018522 DNA topoisomerase, type IIA, conserved site NDN11_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 NDN11_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal NDN11_00020 IPR001241 DNA topoisomerase, type IIA NDN11_00020 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_00020 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_00020 IPR041423 DNA gyrase subunit B insert domain NDN11_00020 IPR011557 DNA gyrase, subunit B NDN11_00020 IPR002288 DNA gyrase B subunit, C-terminal NDN11_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NDN11_00035 IPR032818 DedA family NDN11_00035 IPR032816 SNARE associated Golgi protein NDN11_00040 IPR003593 AAA+ ATPase domain NDN11_00040 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_00040 IPR032781 ABC-transporter extension domain NDN11_00040 IPR003439 ABC transporter-like NDN11_00040 IPR017871 ABC transporter, conserved site NDN11_00045 IPR038404 TRAP transporter solute receptor DctP superfamily NDN11_00050 IPR038404 TRAP transporter solute receptor DctP superfamily NDN11_00055 IPR038404 TRAP transporter solute receptor DctP superfamily NDN11_00060 IPR038404 TRAP transporter solute receptor DctP superfamily NDN11_00065 IPR016092 FeS cluster insertion protein NDN11_00065 IPR023063 FeS cluster insertion protein ErpA NDN11_00065 IPR017870 FeS cluster insertion, C-terminal, conserved site NDN11_00065 IPR000361 FeS cluster biogenesis NDN11_00065 IPR035903 HesB-like domain superfamily NDN11_00070 IPR005338 Anhydro-N-acetylmuramic acid kinase NDN11_00075 IPR036986 RNA-binding S4 domain superfamily NDN11_00075 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NDN11_00075 IPR002305 Aminoacyl-tRNA synthetase, class Ic NDN11_00075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_00075 IPR002942 RNA-binding S4 domain NDN11_00075 IPR002307 Tyrosine-tRNA ligase NDN11_00075 IPR024088 Tyrosine-tRNA ligase, bacterial-type NDN11_00075 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 NDN11_00130 IPR015590 Aldehyde dehydrogenase domain NDN11_00130 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_00130 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NDN11_00130 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_00130 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_00135 IPR000175 Sodium:neurotransmitter symporter NDN11_00135 IPR037272 Sodium:neurotransmitter symporter superfamily NDN11_00145 IPR006027 NusB/RsmB/TIM44 NDN11_00145 IPR023267 RNA (C5-cytosine) methyltransferase NDN11_00145 IPR004573 rRNA small subunit methyltransferase B NDN11_00145 IPR035926 NusB-like superfamily NDN11_00145 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type NDN11_00145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_00145 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site NDN11_00150 IPR002376 Formyl transferase, N-terminal NDN11_00150 IPR036477 Formyl transferase, N-terminal domain superfamily NDN11_00150 IPR011034 Formyl transferase-like, C-terminal domain superfamily NDN11_00150 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain NDN11_00150 IPR037022 Formyl transferase, C-terminal domain superfamily NDN11_00150 IPR005794 Methionyl-tRNA formyltransferase NDN11_00150 IPR005793 Formyl transferase, C-terminal NDN11_00155 IPR042096 Dihydroxy-acid dehydratase, C-terminal NDN11_00155 IPR004404 Dihydroxy-acid dehydratase NDN11_00155 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase NDN11_00155 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site NDN11_00155 IPR037237 IlvD/EDD, N-terminal domain NDN11_00170 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_00170 IPR005119 LysR, substrate-binding NDN11_00170 IPR000847 Transcription regulator HTH, LysR NDN11_00170 IPR036390 Winged helix DNA-binding domain superfamily NDN11_00175 IPR005119 LysR, substrate-binding NDN11_00175 IPR000847 Transcription regulator HTH, LysR NDN11_00175 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_00175 IPR036390 Winged helix DNA-binding domain superfamily NDN11_00180 IPR036291 NAD(P)-binding domain superfamily NDN11_00180 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_00185 IPR006043 Xanthine/uracil/vitamin C permease NDN11_00185 IPR006042 Xanthine/uracil permease NDN11_00185 IPR019918 Pyrimidine permease RutG, predicted NDN11_00190 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site NDN11_00190 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type NDN11_00190 IPR021135 Phosphoenolpyruvate carboxylase NDN11_00190 IPR033129 Phosphoenolpyruvate carboxylase, His active site NDN11_00190 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily NDN11_00195 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NDN11_00195 IPR001647 DNA-binding HTH domain, TetR-type NDN11_00195 IPR009057 Homeobox-like domain superfamily NDN11_00200 IPR006143 RND efflux pump, membrane fusion protein NDN11_00200 IPR030190 Macrolide export protein MacA NDN11_00200 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NDN11_00205 IPR022831 Multidrug resistance protein MdtB NDN11_00205 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NDN11_00205 IPR001036 Acriflavin resistance protein NDN11_00215 IPR002939 Chaperone DnaJ, C-terminal NDN11_00215 IPR001623 DnaJ domain NDN11_00215 IPR018253 DnaJ domain, conserved site NDN11_00215 IPR008971 HSP40/DnaJ peptide-binding NDN11_00215 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily NDN11_00215 IPR036869 Chaperone J-domain superfamily NDN11_00215 IPR001305 Heat shock protein DnaJ, cysteine-rich domain NDN11_00215 IPR012724 Chaperone DnaJ NDN11_00220 IPR022663 Dihydrodipicolinate reductase, C-terminal NDN11_00220 IPR000846 Dihydrodipicolinate reductase, N-terminal NDN11_00220 IPR023940 Dihydrodipicolinate reductase NDN11_00220 IPR036291 NAD(P)-binding domain superfamily NDN11_00220 IPR022664 Dihydrodipicolinate reductase, conserved site NDN11_00230 IPR036259 MFS transporter superfamily NDN11_00230 IPR020846 Major facilitator superfamily domain NDN11_00230 IPR011701 Major facilitator superfamily NDN11_00235 IPR036812 NADP-dependent oxidoreductase domain superfamily NDN11_00235 IPR023210 NADP-dependent oxidoreductase domain NDN11_00235 IPR020471 Aldo/keto reductase NDN11_00235 IPR018170 Aldo/keto reductase, conserved site NDN11_00240 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_00240 IPR005119 LysR, substrate-binding NDN11_00240 IPR000847 Transcription regulator HTH, LysR NDN11_00240 IPR036390 Winged helix DNA-binding domain superfamily NDN11_00250 IPR000524 Transcription regulator HTH, GntR NDN11_00250 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_00250 IPR036390 Winged helix DNA-binding domain superfamily NDN11_00250 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_00250 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_00250 IPR004839 Aminotransferase, class I/classII NDN11_00250 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_00255 IPR013149 Alcohol dehydrogenase, C-terminal NDN11_00255 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site NDN11_00255 IPR013154 Alcohol dehydrogenase, N-terminal NDN11_00255 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NDN11_00255 IPR011032 GroES-like superfamily NDN11_00255 IPR036291 NAD(P)-binding domain superfamily NDN11_00255 IPR020843 Polyketide synthase, enoylreductase domain NDN11_00260 IPR005019 Methyladenine glycosylase NDN11_00260 IPR011257 DNA glycosylase NDN11_00260 IPR004597 DNA-3-methyladenine glycosylase I NDN11_00275 IPR004036 Endonuclease III-like, conserved site-2 NDN11_00275 IPR015797 NUDIX hydrolase-like domain superfamily NDN11_00275 IPR029119 MutY, C-terminal NDN11_00275 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal NDN11_00275 IPR000445 Helix-hairpin-helix motif NDN11_00275 IPR005760 A/G-specific adenine glycosylase MutY NDN11_00275 IPR003265 HhH-GPD domain NDN11_00275 IPR004035 Endonuclease III, iron-sulphur binding site NDN11_00275 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif NDN11_00275 IPR011257 DNA glycosylase NDN11_00285 IPR009760 Protein of unknown function DUF1328 NDN11_00290 IPR008228 Uncharacterised conserved protein UCP006173 NDN11_00290 IPR005358 Putative zinc- or iron-chelating domain containing protein NDN11_00295 IPR011042 Six-bladed beta-propeller, TolB-like NDN11_00295 IPR012938 Glucose/Sorbosone dehydrogenase NDN11_00295 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase NDN11_00300 IPR001586 Beta-lactamase, class-C active site NDN11_00300 IPR001466 Beta-lactamase-related NDN11_00300 IPR012338 Beta-lactamase/transpeptidase-like NDN11_00305 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_00305 IPR021886 MgsA AAA+ ATPase C-terminal NDN11_00305 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal NDN11_00305 IPR003959 ATPase, AAA-type, core NDN11_00305 IPR032423 AAA C-terminal domain NDN11_00305 IPR003593 AAA+ ATPase domain NDN11_00310 IPR000620 EamA domain NDN11_00325 IPR010917 TonB-dependent receptor, conserved site NDN11_00325 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_00325 IPR010916 TonB box, conserved site NDN11_00325 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_00325 IPR010101 TonB-dependent vitamin B12 transporter BtuB NDN11_00325 IPR039426 Vitamin B12 transporter BtuB-like NDN11_00325 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_00325 IPR012910 TonB-dependent receptor, plug domain NDN11_00330 IPR028923 SAICAR synthetase/ADE2, N-terminal NDN11_00330 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase NDN11_00330 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase NDN11_00330 IPR018236 SAICAR synthetase, conserved site NDN11_00340 IPR020624 Schiff base-forming aldolase, conserved site NDN11_00340 IPR020625 Schiff base-forming aldolase, active site NDN11_00340 IPR013785 Aldolase-type TIM barrel NDN11_00340 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA NDN11_00340 IPR002220 DapA-like NDN11_00345 IPR036380 Isochorismatase-like superfamily NDN11_00345 IPR000868 Isochorismatase-like NDN11_00350 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NDN11_00350 IPR019888 Transcription regulator AsnC-type NDN11_00350 IPR011008 Dimeric alpha-beta barrel NDN11_00350 IPR000485 AsnC-type HTH domain NDN11_00350 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NDN11_00350 IPR011991 ArsR-like helix-turn-helix domain NDN11_00350 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_00350 IPR036390 Winged helix DNA-binding domain superfamily NDN11_00360 IPR017932 Glutamine amidotransferase type 2 domain NDN11_00360 IPR035466 GlmS/AgaS, SIS domain 1 NDN11_00360 IPR035490 GlmS/FrlB, SIS domain 2 NDN11_00360 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising NDN11_00360 IPR029055 Nucleophile aminohydrolases, N-terminal NDN11_00360 IPR001347 Sugar isomerase (SIS) NDN11_00365 IPR011004 Trimeric LpxA-like superfamily NDN11_00365 IPR029044 Nucleotide-diphospho-sugar transferases NDN11_00365 IPR018357 Hexapeptide transferase, conserved site NDN11_00365 IPR025877 MobA-like NTP transferase NDN11_00365 IPR038009 GlmU, C-terminal LbH domain NDN11_00365 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase NDN11_00365 IPR001451 Hexapeptide repeat NDN11_00370 IPR007686 YutG/PgpA domain NDN11_00370 IPR026037 Phosphatidylglycerophosphatase A NDN11_00370 IPR036681 PgpA-like superfamily NDN11_00375 IPR006283 Thiamine-monophosphate kinase NDN11_00375 IPR036921 PurM-like, N-terminal domain superfamily NDN11_00375 IPR016188 PurM-like, N-terminal domain NDN11_00375 IPR036676 PurM-like, C-terminal domain superfamily NDN11_00375 IPR010918 PurM-like, C-terminal domain NDN11_00380 IPR011605 NusB antitermination factor NDN11_00380 IPR035926 NusB-like superfamily NDN11_00380 IPR006027 NusB/RsmB/TIM44 NDN11_00385 IPR034964 Lumazine synthase NDN11_00385 IPR036467 Lumazine/riboflavin synthase superfamily NDN11_00385 IPR002180 Lumazine/riboflavin synthase NDN11_00390 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily NDN11_00390 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB NDN11_00390 IPR032677 GTP cyclohydrolase II NDN11_00390 IPR036144 RibA-like superfamily NDN11_00400 IPR023214 HAD superfamily NDN11_00400 IPR002912 ACT domain NDN11_00400 IPR036412 HAD-like superfamily NDN11_00400 IPR023190 Phosphoserine phosphatase, domain 2 NDN11_00415 IPR003732 D-aminoacyl-tRNA deacylase DTD NDN11_00415 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily NDN11_00420 IPR020835 Catalase superfamily NDN11_00420 IPR018028 Catalase, mono-functional, haem-containing NDN11_00420 IPR024708 Catalase active site NDN11_00420 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 NDN11_00420 IPR011614 Catalase core domain NDN11_00420 IPR010582 Catalase immune-responsive domain NDN11_00420 IPR037060 Catalase core domain superfamily NDN11_00420 IPR002226 Catalase haem-binding site NDN11_00430 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase NDN11_00430 IPR006406 Nicotinate phosphoribosyltransferase NDN11_00430 IPR007229 Nicotinate phosphoribosyltransferase family NDN11_00430 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal NDN11_00430 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain NDN11_00440 IPR001763 Rhodanese-like domain NDN11_00440 IPR036873 Rhodanese-like domain superfamily NDN11_00440 IPR001307 Thiosulphate sulfurtransferase, conserved site NDN11_00445 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 NDN11_00445 IPR003817 Phosphatidylserine decarboxylase-related NDN11_00445 IPR033177 Phosphatidylserine decarboxylase NDN11_00455 IPR011335 Restriction endonuclease type II-like NDN11_00455 IPR015291 Restriction endonuclease, type II, MspI NDN11_00460 IPR018117 DNA methylase, C-5 cytosine-specific, active site NDN11_00460 IPR001387 Cro/C1-type helix-turn-helix domain NDN11_00460 IPR010982 Lambda repressor-like, DNA-binding domain superfamily NDN11_00460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_00460 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site NDN11_00460 IPR001525 C-5 cytosine methyltransferase NDN11_00480 IPR005119 LysR, substrate-binding NDN11_00480 IPR000847 Transcription regulator HTH, LysR NDN11_00480 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_00480 IPR036390 Winged helix DNA-binding domain superfamily NDN11_00485 IPR005119 LysR, substrate-binding NDN11_00485 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_00485 IPR036390 Winged helix DNA-binding domain superfamily NDN11_00485 IPR000847 Transcription regulator HTH, LysR NDN11_00500 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_00500 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_00500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_00500 IPR005467 Histidine kinase domain NDN11_00500 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_00500 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_00500 IPR035965 PAS domain superfamily NDN11_00500 IPR000014 PAS domain NDN11_00500 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR NDN11_00500 IPR013767 PAS fold NDN11_00500 IPR021766 Phosphate regulon sensor protein PhoR NDN11_00505 IPR039420 Transcriptional regulatory protein WalR-like NDN11_00505 IPR001789 Signal transduction response regulator, receiver domain NDN11_00505 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_00505 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB NDN11_00505 IPR016032 Signal transduction response regulator, C-terminal effector NDN11_00505 IPR001867 OmpR/PhoB-type DNA-binding domain NDN11_00505 IPR011006 CheY-like superfamily NDN11_00515 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_00515 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_00515 IPR036291 NAD(P)-binding domain superfamily NDN11_00520 IPR002528 Multi antimicrobial extrusion protein NDN11_00525 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_00525 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_00525 IPR004839 Aminotransferase, class I/classII NDN11_00525 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_00530 IPR007383 Protein of unknown function DUF445 NDN11_00545 IPR007370 Glutamate--cysteine ligase NDN11_00545 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain NDN11_00545 IPR006334 Glutamate--cysteine ligase, monofunctional NDN11_00550 IPR003752 Disulphide bond formation protein DsbB/BdbC NDN11_00550 IPR022920 Disulphide bond formation protein DsbB NDN11_00550 IPR023380 DsbB-like superfamily NDN11_00555 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal NDN11_00555 IPR006531 Gp5 N-terminal NDN11_00555 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain NDN11_00555 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset NDN11_00555 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein NDN11_00555 IPR037026 Vgr protein, OB-fold domain superfamily NDN11_00560 IPR038765 Papain-like cysteine peptidase superfamily NDN11_00560 IPR018392 LysM domain NDN11_00560 IPR000064 Endopeptidase, NLPC/P60 domain NDN11_00560 IPR036779 LysM domain superfamily NDN11_00590 IPR029058 Alpha/Beta hydrolase fold NDN11_00590 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA NDN11_00595 IPR002288 DNA gyrase B subunit, C-terminal NDN11_00595 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_00595 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_00595 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_00595 IPR001241 DNA topoisomerase, type IIA NDN11_00595 IPR013760 DNA topoisomerase, type IIA-like domain superfamily NDN11_00595 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal NDN11_00595 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 NDN11_00595 IPR018522 DNA topoisomerase, type IIA, conserved site NDN11_00595 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative NDN11_00595 IPR006171 TOPRIM domain NDN11_00595 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NDN11_00600 IPR039570 AmiC, periplasmic binding domain NDN11_00600 IPR000709 Leu/Ile/Val-binding protein NDN11_00600 IPR028082 Periplasmic binding protein-like I NDN11_00605 IPR001851 ABC transporter, permease NDN11_00615 IPR017871 ABC transporter, conserved site NDN11_00615 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_00615 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NDN11_00615 IPR003439 ABC transporter-like NDN11_00615 IPR003593 AAA+ ATPase domain NDN11_00620 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_00620 IPR017871 ABC transporter, conserved site NDN11_00620 IPR003439 ABC transporter-like NDN11_00620 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein NDN11_00620 IPR003593 AAA+ ATPase domain NDN11_00630 IPR016181 Acyl-CoA N-acyltransferase NDN11_00630 IPR000182 GNAT domain NDN11_00645 IPR036770 Ankyrin repeat-containing domain superfamily NDN11_00645 IPR029062 Class I glutamine amidotransferase-like NDN11_00645 IPR017926 Glutamine amidotransferase NDN11_00645 IPR011697 Peptidase C26 NDN11_00645 IPR002110 Ankyrin repeat NDN11_00645 IPR020683 Ankyrin repeat-containing domain NDN11_00655 IPR035671 DsbD gamma NDN11_00655 IPR003834 Cytochrome C biogenesis protein, transmembrane domain NDN11_00655 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain NDN11_00655 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily NDN11_00655 IPR022910 Thiol:disulphide interchange protein DsbD NDN11_00655 IPR036249 Thioredoxin-like superfamily NDN11_00655 IPR017937 Thioredoxin, conserved site NDN11_00655 IPR013766 Thioredoxin domain NDN11_00665 IPR033416 Periplasmic sensor domain CHASE7 NDN11_00665 IPR000160 GGDEF domain NDN11_00665 IPR029787 Nucleotide cyclase NDN11_00670 IPR029058 Alpha/Beta hydrolase fold NDN11_00670 IPR013094 Alpha/beta hydrolase fold-3 NDN11_00670 IPR002168 Lipase, GDXG, putative histidine active site NDN11_00670 IPR033140 Lipase, GDXG, putative serine active site NDN11_00680 IPR006660 Arsenate reductase-like NDN11_00680 IPR036249 Thioredoxin-like superfamily NDN11_00680 IPR006504 Transcriptional regulator Spx/MgsR NDN11_00685 IPR004808 AP endonuclease 1 NDN11_00685 IPR020847 AP endonuclease 1, binding site NDN11_00685 IPR020848 AP endonuclease 1, conserved site NDN11_00685 IPR036691 Endonuclease/exonuclease/phosphatase superfamily NDN11_00685 IPR005135 Endonuclease/exonuclease/phosphatase NDN11_00690 IPR000836 Phosphoribosyltransferase domain NDN11_00690 IPR023031 Orotate phosphoribosyltransferase NDN11_00690 IPR029057 Phosphoribosyltransferase-like NDN11_00690 IPR004467 Orotate phosphoribosyl transferase domain NDN11_00695 IPR011761 ATP-grasp fold NDN11_00695 IPR016185 Pre-ATP-grasp domain superfamily NDN11_00695 IPR011127 D-alanine--D-alanine ligase, N-terminal domain NDN11_00695 IPR005905 D-alanine--D-alanine ligase NDN11_00695 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site NDN11_00695 IPR013815 ATP-grasp fold, subdomain 1 NDN11_00695 IPR011095 D-alanine--D-alanine ligase, C-terminal NDN11_00705 IPR036291 NAD(P)-binding domain superfamily NDN11_00705 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_00705 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_00720 IPR039653 Prenyltransferase NDN11_00720 IPR000537 UbiA prenyltransferase family NDN11_00730 IPR007173 D-arabinono-1,4-lactone oxidase NDN11_00730 IPR016166 FAD-binding domain, PCMH-type NDN11_00730 IPR036318 FAD-binding, type PCMH-like superfamily NDN11_00730 IPR016169 FAD-binding, type PCMH, subdomain 2 NDN11_00730 IPR006094 FAD linked oxidase, N-terminal NDN11_00735 IPR036291 NAD(P)-binding domain superfamily NDN11_00735 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_00735 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_00755 IPR000835 MarR-type HTH domain NDN11_00755 IPR036390 Winged helix DNA-binding domain superfamily NDN11_00755 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_00760 IPR000889 Glutathione peroxidase NDN11_00760 IPR029759 Glutathione peroxidase active site NDN11_00760 IPR029760 Glutathione peroxidase conserved site NDN11_00760 IPR036249 Thioredoxin-like superfamily NDN11_00765 IPR013815 ATP-grasp fold, subdomain 1 NDN11_00765 IPR004218 Prokaryotic glutathione synthetase, ATP-binding NDN11_00765 IPR006284 Glutathione synthetase, prokaryotic NDN11_00765 IPR011761 ATP-grasp fold NDN11_00765 IPR016185 Pre-ATP-grasp domain superfamily NDN11_00765 IPR004215 Prokaryotic glutathione synthetase, N-terminal NDN11_00770 IPR007235 Glycosyl transferase, family 28, C-terminal NDN11_00770 IPR006009 N-acetylglucosaminyltransferase, MurG NDN11_00770 IPR004276 Glycosyltransferase family 28, N-terminal domain NDN11_00775 IPR005758 UDP-N-acetylmuramate--L-alanine ligase NDN11_00775 IPR036565 Mur-like, catalytic domain superfamily NDN11_00775 IPR004101 Mur ligase, C-terminal NDN11_00775 IPR036615 Mur ligase, C-terminal domain superfamily NDN11_00775 IPR013221 Mur ligase, central NDN11_00775 IPR000713 Mur ligase, N-terminal catalytic domain NDN11_00780 IPR016185 Pre-ATP-grasp domain superfamily NDN11_00780 IPR011127 D-alanine--D-alanine ligase, N-terminal domain NDN11_00780 IPR011095 D-alanine--D-alanine ligase, C-terminal NDN11_00780 IPR005905 D-alanine--D-alanine ligase NDN11_00780 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site NDN11_00780 IPR013815 ATP-grasp fold, subdomain 1 NDN11_00780 IPR011761 ATP-grasp fold NDN11_00785 IPR005548 Cell division protein FtsQ/DivIB NDN11_00785 IPR026579 Cell division protein FtsQ NDN11_00785 IPR013685 POTRA domain, FtsQ-type NDN11_00785 IPR034746 POTRA domain NDN11_00790 IPR003494 SHS2 domain inserted in FtsA NDN11_00790 IPR020823 Cell division protein FtsA NDN11_00795 IPR024757 Cell division protein FtsZ, C-terminal NDN11_00795 IPR020805 Cell division protein FtsZ, conserved site NDN11_00795 IPR008280 Tubulin/FtsZ, C-terminal NDN11_00795 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain NDN11_00795 IPR036525 Tubulin/FtsZ, GTPase domain superfamily NDN11_00795 IPR003008 Tubulin/FtsZ, GTPase domain NDN11_00795 IPR000158 Cell division protein FtsZ NDN11_00800 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal NDN11_00800 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal NDN11_00800 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase NDN11_00800 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_00815 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal NDN11_00815 IPR004660 Pyruvate dehydrogenase E1 component NDN11_00815 IPR041621 Pyruvate dehydrogenase E1 component, middle domain NDN11_00815 IPR029061 Thiamin diphosphate-binding fold NDN11_00815 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II NDN11_00815 IPR005474 Transketolase, N-terminal NDN11_00820 IPR011053 Single hybrid motif NDN11_00820 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NDN11_00820 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain NDN11_00820 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex NDN11_00820 IPR004167 Peripheral subunit-binding domain NDN11_00820 IPR000089 Biotin/lipoyl attachment NDN11_00820 IPR036625 E3-binding domain superfamily NDN11_00820 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily NDN11_00830 IPR001727 Gdt1 family NDN11_00835 IPR008254 Flavodoxin/nitric oxide synthase NDN11_00835 IPR001226 Flavodoxin, conserved site NDN11_00835 IPR029039 Flavoprotein-like superfamily NDN11_00835 IPR001279 Metallo-beta-lactamase NDN11_00835 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NDN11_00835 IPR012349 FMN-binding split barrel NDN11_00835 IPR002563 Flavin reductase like domain NDN11_00840 IPR001093 IMP dehydrogenase/GMP reductase NDN11_00840 IPR015875 IMP dehydrogenase / GMP reductase, conserved site NDN11_00840 IPR000644 CBS domain NDN11_00840 IPR013785 Aldolase-type TIM barrel NDN11_00840 IPR005990 Inosine-5'-monophosphate dehydrogenase NDN11_00845 IPR016066 Alpha-D-phosphohexomutase, conserved site NDN11_00845 IPR006352 Phosphoglucosamine mutase, bacterial type NDN11_00845 IPR005841 Alpha-D-phosphohexomutase superfamily NDN11_00845 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily NDN11_00845 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II NDN11_00845 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III NDN11_00845 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III NDN11_00845 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I NDN11_00845 IPR005843 Alpha-D-phosphohexomutase, C-terminal NDN11_00850 IPR000659 Pyridoxamine 5'-phosphate oxidase NDN11_00850 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site NDN11_00850 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative NDN11_00850 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal NDN11_00850 IPR012349 FMN-binding split barrel NDN11_00855 IPR004610 Bacterial RecJ exonuclease NDN11_00855 IPR038763 DHH phosphoesterase superfamily NDN11_00855 IPR003156 DHHA1 domain NDN11_00855 IPR041122 RecJ, OB domain NDN11_00855 IPR001667 DDH domain NDN11_00880 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NDN11_00880 IPR013785 Aldolase-type TIM barrel NDN11_00885 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily NDN11_00885 IPR039901 3-deoxy-D-manno-octulosonic acid transferase NDN11_00885 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal NDN11_00890 IPR029028 Alpha/beta knot methyltransferases NDN11_00890 IPR006700 Ribosomal RNA small subunit methyltransferase E NDN11_00890 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NDN11_00895 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 NDN11_00895 IPR011066 Mechanosensitive ion channel MscS, C-terminal NDN11_00895 IPR006685 Mechanosensitive ion channel MscS NDN11_00895 IPR010920 LSM domain superfamily NDN11_00895 IPR023408 Mechanosensitive ion channel MscS domain superfamily NDN11_00895 IPR006686 Mechanosensitive ion channel MscS, conserved site NDN11_00905 IPR011904 Acetate-CoA ligase NDN11_00905 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain NDN11_00905 IPR025110 AMP-binding enzyme, C-terminal domain NDN11_00905 IPR020845 AMP-binding, conserved site NDN11_00905 IPR000873 AMP-dependent synthetase/ligase NDN11_00905 IPR042099 AMP-dependent synthetase-like superfamily NDN11_00910 IPR000868 Isochorismatase-like NDN11_00910 IPR036380 Isochorismatase-like superfamily NDN11_00915 IPR000485 AsnC-type HTH domain NDN11_00915 IPR011008 Dimeric alpha-beta barrel NDN11_00915 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_00915 IPR036390 Winged helix DNA-binding domain superfamily NDN11_00915 IPR019888 Transcription regulator AsnC-type NDN11_00915 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NDN11_00920 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG NDN11_00920 IPR036661 Luciferase-like domain superfamily NDN11_00920 IPR011251 Luciferase-like domain NDN11_00925 IPR029039 Flavoprotein-like superfamily NDN11_00925 IPR005025 NADPH-dependent FMN reductase-like NDN11_00925 IPR019912 FMN reductase, MsuE-like NDN11_00930 IPR011006 CheY-like superfamily NDN11_00930 IPR016032 Signal transduction response regulator, C-terminal effector NDN11_00930 IPR001789 Signal transduction response regulator, receiver domain NDN11_00930 IPR000792 Transcription regulator LuxR, C-terminal NDN11_00940 IPR001460 Penicillin-binding protein, transpeptidase NDN11_00940 IPR012338 Beta-lactamase/transpeptidase-like NDN11_00945 IPR039435 Diguanylate cyclase DosC, globin sensor domain NDN11_00945 IPR000160 GGDEF domain NDN11_00945 IPR009050 Globin-like superfamily NDN11_00945 IPR012292 Globin/Protoglobin NDN11_00945 IPR029787 Nucleotide cyclase NDN11_00950 IPR004602 UvrABC system subunit A NDN11_00950 IPR003439 ABC transporter-like NDN11_00950 IPR017871 ABC transporter, conserved site NDN11_00950 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_00950 IPR041552 UvrA DNA-binding domain NDN11_00950 IPR041102 UvrA, interaction domain NDN11_00955 IPR009057 Homeobox-like domain superfamily NDN11_00955 IPR001647 DNA-binding HTH domain, TetR-type NDN11_00955 IPR011075 Tetracyclin repressor-like, C-terminal domain NDN11_00955 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NDN11_00960 IPR032821 Ketoacyl-synthetase, C-terminal extension NDN11_00960 IPR016039 Thiolase-like NDN11_00960 IPR009081 Phosphopantetheine binding ACP domain NDN11_00960 IPR015083 Polyketide synthase, docking domain NDN11_00960 IPR020806 Polyketide synthase, phosphopantetheine-binding domain NDN11_00960 IPR013968 Polyketide synthase, ketoreductase domain NDN11_00960 IPR020843 Polyketide synthase, enoylreductase domain NDN11_00960 IPR042104 Polyketide synthase, dehydratase domain superfamily NDN11_00960 IPR020807 Polyketide synthase, dehydratase domain NDN11_00960 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NDN11_00960 IPR014030 Beta-ketoacyl synthase, N-terminal NDN11_00960 IPR014031 Beta-ketoacyl synthase, C-terminal NDN11_00960 IPR011032 GroES-like superfamily NDN11_00960 IPR015357 Erythronolide synthase, docking NDN11_00960 IPR036347 Erythronolide synthase, docking domain superfamily NDN11_00960 IPR013154 Alcohol dehydrogenase, N-terminal NDN11_00960 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NDN11_00960 IPR036291 NAD(P)-binding domain superfamily NDN11_00960 IPR014043 Acyl transferase NDN11_00960 IPR036736 ACP-like superfamily NDN11_00960 IPR001227 Acyl transferase domain superfamily NDN11_00960 IPR018201 Beta-ketoacyl synthase, active site NDN11_00960 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding NDN11_00960 IPR006162 Phosphopantetheine attachment site NDN11_00975 IPR016084 Haem oxygenase-like, multi-helical NDN11_00975 IPR004305 Thiaminase-2/PQQC NDN11_00975 IPR027574 Thiaminase II NDN11_00985 IPR011701 Major facilitator superfamily NDN11_00985 IPR020846 Major facilitator superfamily domain NDN11_00985 IPR036259 MFS transporter superfamily NDN11_00990 IPR012340 Nucleic acid-binding, OB-fold NDN11_00990 IPR011344 Single-stranded DNA-binding protein NDN11_00990 IPR000424 Primosome PriB/single-strand DNA-binding NDN11_01005 IPR000847 Transcription regulator HTH, LysR NDN11_01005 IPR036390 Winged helix DNA-binding domain superfamily NDN11_01005 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_01010 IPR000868 Isochorismatase-like NDN11_01010 IPR036380 Isochorismatase-like superfamily NDN11_01015 IPR012093 Pirin NDN11_01015 IPR008778 Pirin, C-terminal domain NDN11_01015 IPR003829 Pirin, N-terminal domain NDN11_01015 IPR014710 RmlC-like jelly roll fold NDN11_01015 IPR011051 RmlC-like cupin domain superfamily NDN11_01020 IPR014103 Zeta-carotene desaturase NDN11_01020 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_01020 IPR002937 Amine oxidase NDN11_01050 IPR023051 Potassium uptake protein, low affinity, Kup NDN11_01050 IPR003855 Potassium transporter NDN11_01065 IPR023743 Aquaporin Z NDN11_01065 IPR034294 Aquaporin transporter NDN11_01065 IPR023271 Aquaporin-like NDN11_01065 IPR000425 Major intrinsic protein NDN11_01065 IPR022357 Major intrinsic protein, conserved site NDN11_01080 IPR011060 Ribulose-phosphate binding barrel NDN11_01080 IPR004651 Histidine biosynthesis, HisF NDN11_01080 IPR006062 Histidine biosynthesis NDN11_01080 IPR013785 Aldolase-type TIM barrel NDN11_01085 IPR002575 Aminoglycoside phosphotransferase NDN11_01085 IPR011009 Protein kinase-like domain superfamily NDN11_01085 IPR005280 Homoserine kinase, type II NDN11_01100 IPR011251 Luciferase-like domain NDN11_01100 IPR036661 Luciferase-like domain superfamily NDN11_01100 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A NDN11_01105 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain NDN11_01105 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_01105 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_01105 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_01105 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_01110 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_01110 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_01110 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_01110 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain NDN11_01110 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_01110 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_01125 IPR002645 STAS domain NDN11_01125 IPR018045 Sulphate anion transporter, conserved site NDN11_01125 IPR011547 SLC26A/SulP transporter domain NDN11_01125 IPR001902 SLC26A/SulP transporter NDN11_01125 IPR036513 STAS domain superfamily NDN11_01130 IPR011060 Ribulose-phosphate binding barrel NDN11_01130 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase NDN11_01130 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA NDN11_01130 IPR013785 Aldolase-type TIM barrel NDN11_01130 IPR006062 Histidine biosynthesis NDN11_01150 IPR017926 Glutamine amidotransferase NDN11_01150 IPR029062 Class I glutamine amidotransferase-like NDN11_01150 IPR010139 Imidazole glycerol phosphate synthase, subunit H NDN11_01155 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_01155 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily NDN11_01155 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site NDN11_01155 IPR000807 Imidazoleglycerol-phosphate dehydratase NDN11_01185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_01185 IPR013216 Methyltransferase type 11 NDN11_01185 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC NDN11_01190 IPR037171 NagB/RpiA transferase-like NDN11_01190 IPR017821 Succinate CoA transferase NDN11_01190 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily NDN11_01190 IPR003702 Acetyl-CoA hydrolase/transferase NDN11_01190 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain NDN11_01195 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_01195 IPR003660 HAMP domain NDN11_01195 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_01195 IPR005467 Histidine kinase domain NDN11_01195 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_01195 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_01195 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_01200 IPR001867 OmpR/PhoB-type DNA-binding domain NDN11_01200 IPR016032 Signal transduction response regulator, C-terminal effector NDN11_01200 IPR001789 Signal transduction response regulator, receiver domain NDN11_01200 IPR039420 Transcriptional regulatory protein WalR-like NDN11_01200 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_01200 IPR011006 CheY-like superfamily NDN11_01205 IPR003029 S1 domain NDN11_01205 IPR023323 Tex-like domain superfamily NDN11_01205 IPR023319 Tex-like protein, HTH domain superfamily NDN11_01205 IPR018974 Tex-like protein, N-terminal NDN11_01205 IPR032639 Tex protein, YqgF-like domain NDN11_01205 IPR006641 YqgF/RNase H-like domain NDN11_01205 IPR037027 YqgF/RNase H-like domain superfamily NDN11_01205 IPR041692 HHH domain 9 NDN11_01205 IPR012340 Nucleic acid-binding, OB-fold NDN11_01205 IPR012337 Ribonuclease H-like superfamily NDN11_01205 IPR022967 RNA-binding domain, S1 NDN11_01205 IPR010994 RuvA domain 2-like NDN11_01235 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_01235 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_01235 IPR036291 NAD(P)-binding domain superfamily NDN11_01240 IPR000847 Transcription regulator HTH, LysR NDN11_01240 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_01240 IPR005119 LysR, substrate-binding NDN11_01240 IPR036390 Winged helix DNA-binding domain superfamily NDN11_01245 IPR004680 Citrate transporter-like domain NDN11_01245 IPR014738 Citrate transporter NDN11_01255 IPR005829 Sugar transporter, conserved site NDN11_01255 IPR004736 MFS transporter, metabolite:H symporter NDN11_01255 IPR036259 MFS transporter superfamily NDN11_01255 IPR005828 Major facilitator, sugar transporter-like NDN11_01255 IPR020846 Major facilitator superfamily domain NDN11_01260 IPR000551 MerR-type HTH domain NDN11_01260 IPR011788 Zn(II)-responsive transcriptional regulator NDN11_01260 IPR009061 Putative DNA-binding domain superfamily NDN11_01265 IPR010080 Thioester reductase-like domain NDN11_01265 IPR020806 Polyketide synthase, phosphopantetheine-binding domain NDN11_01265 IPR036291 NAD(P)-binding domain superfamily NDN11_01265 IPR009081 Phosphopantetheine binding ACP domain NDN11_01265 IPR036736 ACP-like superfamily NDN11_01265 IPR013120 Male sterility, NAD-binding NDN11_01270 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_01270 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_01270 IPR036291 NAD(P)-binding domain superfamily NDN11_01275 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme NDN11_01275 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase NDN11_01275 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_01275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_01275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_01280 IPR003593 AAA+ ATPase domain NDN11_01280 IPR032781 ABC-transporter extension domain NDN11_01280 IPR003439 ABC transporter-like NDN11_01280 IPR017871 ABC transporter, conserved site NDN11_01280 IPR022374 Energy-dependent translational throttle protein EttA NDN11_01280 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_01300 IPR006143 RND efflux pump, membrane fusion protein NDN11_01300 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NDN11_01300 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB NDN11_01305 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NDN11_01305 IPR001036 Acriflavin resistance protein NDN11_01305 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA NDN11_01310 IPR002524 Cation efflux protein NDN11_01310 IPR036837 Cation efflux protein, cytoplasmic domain superfamily NDN11_01310 IPR027469 Cation efflux transmembrane domain superfamily NDN11_01340 IPR004841 Amino acid permease/ SLC12A domain NDN11_01340 IPR004840 Amino acid permease, conserved site NDN11_01355 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_01355 IPR033910 Glutamyl-tRNA synthetase NDN11_01355 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain NDN11_01355 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 NDN11_01355 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial NDN11_01355 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NDN11_01355 IPR000924 Glutamyl/glutaminyl-tRNA synthetase NDN11_01355 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding NDN11_01365 IPR005669 Thiosulphate/Sulfate-binding protein NDN11_01365 IPR034408 Sulphate/thiosulphate-binding site NDN11_01365 IPR000957 Sulphate/thiosulphate-binding, conserved site NDN11_01370 IPR002903 Ribosomal RNA small subunit methyltransferase H NDN11_01370 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily NDN11_01370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_01375 IPR011922 Cell division protein FtsL NDN11_01385 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase NDN11_01385 IPR000713 Mur ligase, N-terminal catalytic domain NDN11_01385 IPR035911 MurE/MurF, N-terminal NDN11_01385 IPR004101 Mur ligase, C-terminal NDN11_01385 IPR036565 Mur-like, catalytic domain superfamily NDN11_01385 IPR013221 Mur ligase, central NDN11_01385 IPR036615 Mur ligase, C-terminal domain superfamily NDN11_01390 IPR036565 Mur-like, catalytic domain superfamily NDN11_01390 IPR004101 Mur ligase, C-terminal NDN11_01390 IPR013221 Mur ligase, central NDN11_01390 IPR000713 Mur ligase, N-terminal catalytic domain NDN11_01390 IPR035911 MurE/MurF, N-terminal NDN11_01390 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase NDN11_01390 IPR036615 Mur ligase, C-terminal domain superfamily NDN11_01395 IPR000715 Glycosyl transferase, family 4 NDN11_01395 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase NDN11_01395 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site NDN11_01400 IPR025714 Methyltransferase domain NDN11_01400 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted NDN11_01400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_01405 IPR036950 Penicillin binding protein transglycosylase domain NDN11_01405 IPR012338 Beta-lactamase/transpeptidase-like NDN11_01405 IPR001264 Glycosyl transferase, family 51 NDN11_01405 IPR023346 Lysozyme-like domain superfamily NDN11_01405 IPR031376 Penicillin-binding protein, OB-like domain NDN11_01405 IPR001460 Penicillin-binding protein, transpeptidase NDN11_01410 IPR005883 Type IV pilus assembly protein PilM NDN11_01410 IPR003494 SHS2 domain inserted in FtsA NDN11_01415 IPR007813 Fimbrial assembly PilN NDN11_01420 IPR007445 Pilus assembly protein, PilO NDN11_01420 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 NDN11_01430 IPR004845 Type II secretion system GspD, conserved site NDN11_01430 IPR011662 Secretin/TonB, short N-terminal domain NDN11_01430 IPR013355 Type IV pilus secretin PilQ NDN11_01430 IPR038591 NolW-like superfamily NDN11_01430 IPR004846 Type II/III secretion system NDN11_01430 IPR001775 GspD/PilQ family NDN11_01430 IPR021731 AMIN domain NDN11_01430 IPR005644 NolW-like NDN11_01435 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_01435 IPR031322 Shikimate kinase/gluconokinase NDN11_01435 IPR000623 Shikimate kinase/Threonine synthase-like 1 NDN11_01435 IPR023000 Shikimate kinase, conserved site NDN11_01440 IPR016037 3-dehydroquinate synthase AroB NDN11_01440 IPR030963 3-dehydroquinate synthase family NDN11_01440 IPR030960 3-dehydroquinate synthase domain NDN11_01450 IPR006982 Glutamate synthase, central-N NDN11_01450 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily NDN11_01450 IPR002489 Glutamate synthase, alpha subunit, C-terminal NDN11_01450 IPR002932 Glutamate synthase domain NDN11_01450 IPR013785 Aldolase-type TIM barrel NDN11_01450 IPR029055 Nucleophile aminohydrolases, N-terminal NDN11_01450 IPR017932 Glutamine amidotransferase type 2 domain NDN11_01455 IPR009051 Alpha-helical ferredoxin NDN11_01455 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 NDN11_01455 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_01455 IPR028261 Dihydroprymidine dehydrogenase domain II NDN11_01455 IPR023753 FAD/NAD(P)-binding domain NDN11_01460 IPR005829 Sugar transporter, conserved site NDN11_01460 IPR036259 MFS transporter superfamily NDN11_01460 IPR020846 Major facilitator superfamily domain NDN11_01460 IPR011701 Major facilitator superfamily NDN11_01460 IPR004638 Drug resistance transporter EmrB-like NDN11_01470 IPR023353 LemA-like domain superfamily NDN11_01470 IPR007156 LemA NDN11_01475 IPR007621 TPM domain NDN11_01485 IPR012902 Prokaryotic N-terminal methylation site NDN11_01485 IPR001082 Fimbrial protein pilin NDN11_01495 IPR012902 Prokaryotic N-terminal methylation site NDN11_01495 IPR001082 Fimbrial protein pilin NDN11_01505 IPR000537 UbiA prenyltransferase family NDN11_01505 IPR039653 Prenyltransferase NDN11_01510 IPR007016 O-antigen ligase-related NDN11_01510 IPR031726 Protein glycosylation ligase domain NDN11_01510 IPR021797 Virulence factor membrane-bound polymerase, C-terminal NDN11_01515 IPR002024 Bacterioferritin NDN11_01515 IPR012347 Ferritin-like NDN11_01515 IPR009040 Ferritin-like diiron domain NDN11_01515 IPR009078 Ferritin-like superfamily NDN11_01515 IPR008331 Ferritin/DPS protein domain NDN11_01520 IPR007419 BFD-like [2Fe-2S]-binding domain NDN11_01520 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily NDN11_01525 IPR006175 YjgF/YER057c/UK114 family NDN11_01525 IPR019897 RidA, conserved site NDN11_01525 IPR035959 RutC-like superfamily NDN11_01525 IPR006056 RidA family NDN11_01530 IPR002912 ACT domain NDN11_01530 IPR012675 Beta-grasp domain superfamily NDN11_01530 IPR003607 HD/PDEase domain NDN11_01530 IPR004811 RelA/SpoT family NDN11_01530 IPR007685 RelA/SpoT NDN11_01530 IPR004095 TGS NDN11_01530 IPR012676 TGS-like NDN11_01530 IPR033655 RelA, TGS domain NDN11_01535 IPR036161 RPB6/omega subunit-like superfamily NDN11_01535 IPR003716 DNA-directed RNA polymerase, omega subunit NDN11_01535 IPR006110 RNA polymerase, subunit omega/K/RPB6 NDN11_01535 IPR012293 RNA polymerase subunit, RPB6/omega NDN11_01540 IPR008145 Guanylate kinase/L-type calcium channel beta subunit NDN11_01540 IPR008144 Guanylate kinase-like domain NDN11_01540 IPR017665 Guanylate kinase NDN11_01540 IPR020590 Guanylate kinase, conserved site NDN11_01540 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_01545 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase NDN11_01550 IPR012902 Prokaryotic N-terminal methylation site NDN11_01550 IPR001082 Fimbrial protein pilin NDN11_01575 IPR012902 Prokaryotic N-terminal methylation site NDN11_01575 IPR001082 Fimbrial protein pilin NDN11_01610 IPR001082 Fimbrial protein pilin NDN11_01610 IPR012902 Prokaryotic N-terminal methylation site NDN11_01615 IPR020592 Ribosomal protein S16, conserved site NDN11_01615 IPR000307 Ribosomal protein S16 NDN11_01615 IPR023803 Ribosomal protein S16 domain superfamily NDN11_01620 IPR002676 RimM, N-terminal NDN11_01620 IPR036976 RimM, N-terminal domain superfamily NDN11_01620 IPR009000 Translation protein, beta-barrel domain superfamily NDN11_01620 IPR011961 16S rRNA processing protein RimM NDN11_01620 IPR011033 PRC-barrel-like superfamily NDN11_01620 IPR027275 PRC-barrel domain NDN11_01625 IPR029028 Alpha/beta knot methyltransferases NDN11_01625 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria NDN11_01625 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal NDN11_01625 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NDN11_01625 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain NDN11_01630 IPR038657 Ribosomal protein L19 superfamily NDN11_01630 IPR001857 Ribosomal protein L19 NDN11_01630 IPR018257 Ribosomal protein L19, conserved site NDN11_01630 IPR008991 Translation protein SH3-like domain superfamily NDN11_01635 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal NDN11_01635 IPR032819 tRNA pseudouridylate synthase B, C-terminal NDN11_01635 IPR015947 PUA-like superfamily NDN11_01635 IPR002501 Pseudouridine synthase II, N-terminal NDN11_01635 IPR020103 Pseudouridine synthase, catalytic domain superfamily NDN11_01635 IPR014780 tRNA pseudouridine synthase II, TruB NDN11_01640 IPR002781 Transmembrane protein TauE-like NDN11_01645 IPR000620 EamA domain NDN11_01655 IPR000620 EamA domain NDN11_01660 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NDN11_01660 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NDN11_01660 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain NDN11_01660 IPR036291 NAD(P)-binding domain superfamily NDN11_01660 IPR002912 ACT domain NDN11_01660 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NDN11_01665 IPR036318 FAD-binding, type PCMH-like superfamily NDN11_01665 IPR016164 FAD-linked oxidase-like, C-terminal NDN11_01665 IPR004113 FAD-linked oxidase, C-terminal NDN11_01665 IPR004490 Glycolate oxidase subunit GlcD NDN11_01665 IPR006094 FAD linked oxidase, N-terminal NDN11_01665 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 NDN11_01665 IPR016166 FAD-binding domain, PCMH-type NDN11_01685 IPR007138 Antibiotic biosynthesis monooxygenase domain NDN11_01685 IPR011008 Dimeric alpha-beta barrel NDN11_01690 IPR029039 Flavoprotein-like superfamily NDN11_01690 IPR003680 Flavodoxin-like fold NDN11_01705 IPR011701 Major facilitator superfamily NDN11_01705 IPR020846 Major facilitator superfamily domain NDN11_01705 IPR036259 MFS transporter superfamily NDN11_01705 IPR005829 Sugar transporter, conserved site NDN11_01710 IPR032692 Integral membrane protein YccS, N-terminal NDN11_01710 IPR010019 Integral membrane protein, YccS NDN11_01710 IPR010020 Integral membrane protein, YccS/YhfK NDN11_01715 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily NDN11_01715 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone NDN11_01715 IPR018152 Superoxide dismutase, copper/zinc, binding site NDN11_01715 IPR001424 Superoxide dismutase, copper/zinc binding domain NDN11_01720 IPR002549 Transmembrane protein TqsA-like NDN11_01725 IPR025669 AAA domain NDN11_01725 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_01735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_01735 IPR004033 UbiE/COQ5 methyltransferase NDN11_01735 IPR023576 UbiE/COQ5 methyltransferase, conserved site NDN11_01770 IPR015500 Peptidase S8, subtilisin-related NDN11_01770 IPR023828 Peptidase S8, subtilisin, Ser-active site NDN11_01770 IPR034202 Subtilisin Carlsberg-like catalytic domain NDN11_01770 IPR023827 Peptidase S8, subtilisin, Asp-active site NDN11_01770 IPR036852 Peptidase S8/S53 domain superfamily NDN11_01770 IPR022398 Peptidase S8, subtilisin, His-active site NDN11_01770 IPR000209 Peptidase S8/S53 domain NDN11_01785 IPR015944 Glycine-tRNA ligase, beta subunit NDN11_01785 IPR008909 DALR anticodon binding NDN11_01785 IPR006194 Glycine-tRNA synthetase, heterodimeric NDN11_01790 IPR006194 Glycine-tRNA synthetase, heterodimeric NDN11_01790 IPR002310 Glycine-tRNA ligase, alpha subunit NDN11_01815 IPR000644 CBS domain NDN11_01815 IPR038763 DHH phosphoesterase superfamily NDN11_01815 IPR002646 Poly A polymerase, head domain NDN11_01820 IPR007168 Phage shock protein, PspC, N-terminal NDN11_01830 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_01830 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_01830 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NDN11_01830 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_01830 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_01830 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_01830 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain NDN11_01840 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase NDN11_01840 IPR022893 Shikimate dehydrogenase family NDN11_01840 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal NDN11_01840 IPR011342 Shikimate dehydrogenase NDN11_01840 IPR036291 NAD(P)-binding domain superfamily NDN11_01840 IPR041121 SDH, C-terminal NDN11_01845 IPR000524 Transcription regulator HTH, GntR NDN11_01845 IPR036390 Winged helix DNA-binding domain superfamily NDN11_01845 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_01845 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_01845 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_01845 IPR004839 Aminotransferase, class I/classII NDN11_01855 IPR001260 Coproporphyrinogen III oxidase, aerobic NDN11_01855 IPR018375 Coproporphyrinogen III oxidase, conserved site NDN11_01855 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily NDN11_01865 IPR032677 GTP cyclohydrolase II NDN11_01865 IPR036144 RibA-like superfamily NDN11_01865 IPR000926 GTP cyclohydrolase II, RibA NDN11_01870 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II NDN11_01870 IPR005477 Deoxyxylulose-5-phosphate synthase NDN11_01870 IPR033248 Transketolase, C-terminal domain NDN11_01870 IPR020826 Transketolase binding site NDN11_01870 IPR029061 Thiamin diphosphate-binding fold NDN11_01870 IPR005475 Transketolase-like, pyrimidine-binding domain NDN11_01875 IPR033942 Inositol monophosphatase NDN11_01875 IPR020550 Inositol monophosphatase, conserved site NDN11_01875 IPR000760 Inositol monophosphatase-like NDN11_01875 IPR022337 Inositol monophosphatase, SuhB NDN11_01875 IPR020583 Inositol monophosphatase, metal-binding site NDN11_01885 IPR011545 DEAD/DEAH box helicase domain NDN11_01885 IPR001650 Helicase, C-terminal NDN11_01885 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_01885 IPR028622 ATP-dependent RNA helicase RhlE NDN11_01885 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NDN11_01885 IPR014014 RNA helicase, DEAD-box type, Q motif NDN11_01885 IPR014001 Helicase superfamily 1/2, ATP-binding domain NDN11_01890 IPR003593 AAA+ ATPase domain NDN11_01890 IPR003439 ABC transporter-like NDN11_01890 IPR017871 ABC transporter, conserved site NDN11_01890 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl NDN11_01890 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_01895 IPR030802 ABC transporter permease MalE NDN11_01895 IPR003453 ABC transport permease subunit MlaE, Proteobacteria NDN11_01900 IPR003399 Mce/MlaD NDN11_01900 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD NDN11_01905 IPR042245 Tgt2/MlaC superfamily NDN11_01905 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC NDN11_01915 IPR004488 Magnesium/cobalt transport protein CorA NDN11_01915 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB NDN11_01920 IPR031100 LOG family NDN11_01920 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG NDN11_01925 IPR020084 NUDIX hydrolase, conserved site NDN11_01925 IPR015797 NUDIX hydrolase-like domain superfamily NDN11_01925 IPR020476 NUDIX hydrolase NDN11_01925 IPR000086 NUDIX hydrolase domain NDN11_01930 IPR000836 Phosphoribosyltransferase domain NDN11_01930 IPR029057 Phosphoribosyltransferase-like NDN11_01930 IPR005222 Competence protein ComF NDN11_01935 IPR004609 ATP-dependent DNA helicase RecG NDN11_01935 IPR011545 DEAD/DEAH box helicase domain NDN11_01935 IPR014001 Helicase superfamily 1/2, ATP-binding domain NDN11_01935 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_01935 IPR012340 Nucleic acid-binding, OB-fold NDN11_01935 IPR033454 RecG, wedge domain NDN11_01935 IPR001650 Helicase, C-terminal NDN11_01945 IPR038404 TRAP transporter solute receptor DctP superfamily NDN11_01950 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase NDN11_01950 IPR041728 GPAT/DHAPAT, acyltransferase domain NDN11_01950 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB NDN11_01950 IPR002123 Phospholipid/glycerol acyltransferase NDN11_01955 IPR003703 Acyl-CoA thioesterase NDN11_01955 IPR029069 HotDog domain superfamily NDN11_01960 IPR036458 Sodium:dicarboxylate symporter superfamily NDN11_01960 IPR001991 Sodium:dicarboxylate symporter NDN11_01960 IPR033380 Glutamate-aspartate symport protein GltP/GltT NDN11_01960 IPR018107 Sodium:dicarboxylate symporter, conserved site NDN11_01970 IPR030393 EngB-type guanine nucleotide-binding (G) domain NDN11_01970 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC NDN11_01970 IPR006073 GTP binding domain NDN11_01970 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_01975 IPR036390 Winged helix DNA-binding domain superfamily NDN11_01975 IPR030489 Transcription regulator Rrf2-type, conserved site NDN11_01975 IPR000944 Transcription regulator Rrf2-type NDN11_01975 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_01980 IPR017938 Riboflavin synthase-like beta-barrel NDN11_01980 IPR001433 Oxidoreductase FAD/NAD(P)-binding NDN11_01980 IPR012292 Globin/Protoglobin NDN11_01980 IPR023950 Flavohemoprotein NDN11_01980 IPR009050 Globin-like superfamily NDN11_01980 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NDN11_01980 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NDN11_01980 IPR017927 FAD-binding domain, ferredoxin reductase-type NDN11_01980 IPR000971 Globin NDN11_01985 IPR033186 Helicase HerA-like C-terminal NDN11_01985 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_01990 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_01990 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_01990 IPR006233 Cystathionine beta-lyase, bacterial NDN11_01990 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_01990 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme NDN11_01995 IPR029062 Class I glutamine amidotransferase-like NDN11_01995 IPR017926 Glutamine amidotransferase NDN11_02000 IPR001848 Ribosomal protein S10 NDN11_02000 IPR018268 Ribosomal protein S10, conserved site NDN11_02000 IPR027486 Ribosomal protein S10 domain NDN11_02000 IPR036838 Ribosomal protein S10 domain superfamily NDN11_02005 IPR009000 Translation protein, beta-barrel domain superfamily NDN11_02005 IPR000597 Ribosomal protein L3 NDN11_02005 IPR019927 Ribosomal protein L3, bacterial/organelle-type NDN11_02005 IPR019926 Ribosomal protein L3, conserved site NDN11_02010 IPR023574 Ribosomal protein L4 domain superfamily NDN11_02010 IPR013005 50S ribosomal protein uL4 NDN11_02010 IPR002136 Ribosomal protein L4/L1e NDN11_02015 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily NDN11_02015 IPR012678 Ribosomal protein L23/L15e core domain superfamily NDN11_02015 IPR013025 Ribosomal protein L25/L23 NDN11_02020 IPR005880 Ribosomal protein L2, bacterial/organellar-type NDN11_02020 IPR012340 Nucleic acid-binding, OB-fold NDN11_02020 IPR022666 Ribosomal Proteins L2, RNA binding domain NDN11_02020 IPR014722 Ribosomal protein L2, domain 2 NDN11_02020 IPR002171 Ribosomal protein L2 NDN11_02020 IPR008991 Translation protein SH3-like domain superfamily NDN11_02020 IPR014726 Ribosomal protein L2, domain 3 NDN11_02020 IPR022669 Ribosomal protein L2, C-terminal NDN11_02025 IPR020934 Ribosomal protein S19 conserved site NDN11_02025 IPR005732 Ribosomal protein S19, bacterial-type NDN11_02025 IPR002222 Ribosomal protein S19/S15 NDN11_02025 IPR023575 Ribosomal protein S19, superfamily NDN11_02030 IPR001063 Ribosomal protein L22/L17 NDN11_02030 IPR018260 Ribosomal protein L22/L17, conserved site NDN11_02030 IPR036394 Ribosomal protein L22/L17 superfamily NDN11_02030 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type NDN11_02040 IPR020798 Ribosomal protein L16, conserved site NDN11_02040 IPR036920 Ribosomal protein L10e/L16 superfamily NDN11_02040 IPR016180 Ribosomal protein L10e/L16 NDN11_02040 IPR000114 Ribosomal protein L16 NDN11_02045 IPR001854 Ribosomal protein L29/L35 NDN11_02045 IPR036049 Ribosomal protein L29/L35 superfamily NDN11_02050 IPR012340 Nucleic acid-binding, OB-fold NDN11_02050 IPR019984 30S ribosomal protein S17 NDN11_02050 IPR000266 Ribosomal protein S17/S11 NDN11_02050 IPR019979 Ribosomal protein S17, conserved site NDN11_02055 IPR019972 Ribosomal protein L14P, conserved site NDN11_02055 IPR005745 Ribosomal protein L14P, bacterial-type NDN11_02055 IPR036853 Ribosomal protein L14 superfamily NDN11_02055 IPR000218 Ribosomal protein L14P NDN11_02060 IPR005824 KOW NDN11_02060 IPR041988 Ribosomal Protein L26/L24, KOW domain NDN11_02060 IPR014722 Ribosomal protein L2, domain 2 NDN11_02060 IPR003256 Ribosomal protein L24 NDN11_02060 IPR005825 Ribosomal protein L24/L26, conserved site NDN11_02060 IPR008991 Translation protein SH3-like domain superfamily NDN11_02065 IPR002132 Ribosomal protein L5 NDN11_02065 IPR020930 Ribosomal protein L5, bacterial-type NDN11_02065 IPR031309 Ribosomal protein L5, C-terminal NDN11_02065 IPR020929 Ribosomal protein L5, conserved site NDN11_02065 IPR022803 Ribosomal protein L5 domain superfamily NDN11_02065 IPR031310 Ribosomal protein L5, N-terminal NDN11_02070 IPR018271 Ribosomal protein S14, conserved site NDN11_02070 IPR001209 Ribosomal protein S14 NDN11_02070 IPR023036 Ribosomal protein S14, bacterial/plastid NDN11_02075 IPR000630 Ribosomal protein S8 NDN11_02075 IPR035987 Ribosomal protein S8 superfamily NDN11_02080 IPR000702 Ribosomal protein L6 NDN11_02080 IPR020040 Ribosomal protein L6, alpha-beta domain NDN11_02080 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily NDN11_02080 IPR019906 Ribosomal protein L6, bacterial-type NDN11_02080 IPR002358 Ribosomal protein L6, conserved site NDN11_02085 IPR005484 Ribosomal protein L18 NDN11_02085 IPR004389 Ribosomal protein L18, bacterial-type NDN11_02090 IPR013810 Ribosomal protein S5, N-terminal NDN11_02090 IPR018192 Ribosomal protein S5, N-terminal, conserved site NDN11_02090 IPR005324 Ribosomal protein S5, C-terminal NDN11_02090 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NDN11_02090 IPR000851 Ribosomal protein S5 NDN11_02090 IPR005712 Ribosomal protein S5, bacterial-type NDN11_02090 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_02095 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily NDN11_02095 IPR005996 Ribosomal protein L30, bacterial-type NDN11_02095 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain NDN11_02100 IPR036227 Ribosomal L18e/L15P superfamily NDN11_02100 IPR030878 Ribosomal protein L15 NDN11_02100 IPR005749 Ribosomal protein L15, bacterial-type NDN11_02100 IPR001196 Ribosomal protein L15, conserved site NDN11_02100 IPR021131 Ribosomal protein L18e/L15P NDN11_02105 IPR030659 SecY conserved site NDN11_02105 IPR023201 SecY domain superfamily NDN11_02105 IPR026593 Protein translocase subunit SecY NDN11_02105 IPR002208 SecY/SEC61-alpha family NDN11_02110 IPR035977 Ribosomal protein L36 superfamily NDN11_02110 IPR000473 Ribosomal protein L36 NDN11_02115 IPR027437 30s ribosomal protein S13, C-terminal NDN11_02115 IPR001892 Ribosomal protein S13 NDN11_02115 IPR010979 Ribosomal protein S13-like, H2TH NDN11_02115 IPR019980 Ribosomal protein S13, bacterial-type NDN11_02115 IPR018269 Ribosomal protein S13, conserved site NDN11_02120 IPR001971 Ribosomal protein S11 NDN11_02120 IPR019981 Ribosomal protein S11, bacterial-type NDN11_02120 IPR018102 Ribosomal S11, conserved site NDN11_02120 IPR036967 Ribosomal protein S11 superfamily NDN11_02125 IPR001912 Ribosomal protein S4/S9, N-terminal NDN11_02125 IPR022801 Ribosomal protein S4/S9 NDN11_02125 IPR005709 Ribosomal protein S4, bacterial-type NDN11_02125 IPR002942 RNA-binding S4 domain NDN11_02125 IPR036986 RNA-binding S4 domain superfamily NDN11_02125 IPR018079 Ribosomal protein S4, conserved site NDN11_02130 IPR011262 DNA-directed RNA polymerase, insert domain NDN11_02130 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type NDN11_02130 IPR011773 DNA-directed RNA polymerase, alpha subunit NDN11_02130 IPR036603 RNA polymerase, RBP11-like subunit NDN11_02130 IPR011260 RNA polymerase, alpha subunit, C-terminal NDN11_02130 IPR036643 DNA-directed RNA polymerase, insert domain superfamily NDN11_02135 IPR000456 Ribosomal protein L17 NDN11_02135 IPR036373 Ribosomal protein L17 superfamily NDN11_02145 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_02145 IPR020946 Flavin monooxygenase-like NDN11_02155 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_02155 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_02155 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_02155 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_02155 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_02155 IPR006089 Acyl-CoA dehydrogenase, conserved site NDN11_02155 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NDN11_02160 IPR005631 Flavinator of succinate dehydrogenase NDN11_02160 IPR036714 Flavinator of succinate dehydrogenase superfamily NDN11_02195 IPR004779 Carboxylate/Amino Acid/Amine Transporter NDN11_02195 IPR000620 EamA domain NDN11_02200 IPR009057 Homeobox-like domain superfamily NDN11_02200 IPR018060 DNA binding HTH domain, AraC-type NDN11_02200 IPR018062 HTH domain AraC-type, conserved site NDN11_02200 IPR020449 Transcription regulator HTH, AraC- type NDN11_02220 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 NDN11_02220 IPR001567 Peptidase M3A/M3B catalytic domain NDN11_02230 IPR011129 Cold shock domain NDN11_02230 IPR003029 S1 domain NDN11_02230 IPR022967 RNA-binding domain, S1 NDN11_02230 IPR013668 Ribonuclease R winged-helix domain NDN11_02230 IPR011805 Ribonuclease R NDN11_02230 IPR040476 RNase II/RNase R, cold shock domain NDN11_02230 IPR022966 Ribonuclease II/R, conserved site NDN11_02230 IPR001900 Ribonuclease II/R NDN11_02230 IPR013223 Ribonuclease B, N-terminal OB domain NDN11_02230 IPR012340 Nucleic acid-binding, OB-fold NDN11_02230 IPR004476 Ribonuclease II/ribonuclease R NDN11_02275 IPR011234 Fumarylacetoacetase-like, C-terminal NDN11_02275 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily NDN11_02290 IPR023679 Uncharacterised protein family UPF0761, bacterial NDN11_02290 IPR017039 Virulence factor BrkB NDN11_02295 IPR005025 NADPH-dependent FMN reductase-like NDN11_02295 IPR010089 Flavoprotein WrbA-like NDN11_02295 IPR001226 Flavodoxin, conserved site NDN11_02295 IPR029039 Flavoprotein-like superfamily NDN11_02295 IPR008254 Flavodoxin/nitric oxide synthase NDN11_02305 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt NDN11_02315 IPR001952 Alkaline phosphatase NDN11_02315 IPR018299 Alkaline phosphatase, active site NDN11_02315 IPR017850 Alkaline-phosphatase-like, core domain superfamily NDN11_02335 IPR019820 Sec-independent periplasmic protein translocase, conserved site NDN11_02335 IPR002033 Sec-independent periplasmic protein translocase TatC NDN11_02340 IPR003369 Sec-independent protein translocase protein TatA/B/E NDN11_02340 IPR018448 Twin-arginine translocation protein TatB NDN11_02345 IPR006312 Sec-independent protein translocase protein TatA/E NDN11_02345 IPR003369 Sec-independent protein translocase protein TatA/B/E NDN11_02355 IPR020922 dITP/XTP pyrophosphatase NDN11_02355 IPR002637 Ham1-like protein NDN11_02355 IPR029001 Inosine triphosphate pyrophosphatase-like NDN11_02370 IPR029058 Alpha/Beta hydrolase fold NDN11_02370 IPR000073 Alpha/beta hydrolase fold-1 NDN11_02370 IPR008220 Homoserine/serine acetyltransferase MetX-like NDN11_02370 IPR010743 Methionine biosynthesis MetW NDN11_02370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_02375 IPR000073 Alpha/beta hydrolase fold-1 NDN11_02375 IPR029058 Alpha/Beta hydrolase fold NDN11_02375 IPR008220 Homoserine/serine acetyltransferase MetX-like NDN11_02380 IPR000891 Pyruvate carboxyltransferase NDN11_02380 IPR039371 LeuA, N-terminal catalytic TIM barrel domain NDN11_02380 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily NDN11_02380 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain NDN11_02380 IPR013785 Aldolase-type TIM barrel NDN11_02380 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site NDN11_02380 IPR005668 2-isopropylmalate synthase NDN11_02385 IPR006620 Prolyl 4-hydroxylase, alpha subunit NDN11_02385 IPR005123 Oxoglutarate/iron-dependent dioxygenase NDN11_02385 IPR041097 PKHD-type hydroxylase C-terminal domain NDN11_02385 IPR023550 PKHD-type hydroxylase NDN11_02390 IPR030148 Catecholate siderophore receptor Fiu NDN11_02390 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_02390 IPR012910 TonB-dependent receptor, plug domain NDN11_02390 IPR039423 TonB-dependent receptor-like NDN11_02390 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_02390 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_02390 IPR010105 TonB-dependent siderophore receptor NDN11_02395 IPR013785 Aldolase-type TIM barrel NDN11_02395 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent NDN11_02395 IPR000262 FMN-dependent dehydrogenase NDN11_02395 IPR037396 FMN hydroxy acid dehydrogenase domain NDN11_02395 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site NDN11_02400 IPR006620 Prolyl 4-hydroxylase, alpha subunit NDN11_02400 IPR023550 PKHD-type hydroxylase NDN11_02400 IPR041097 PKHD-type hydroxylase C-terminal domain NDN11_02400 IPR005123 Oxoglutarate/iron-dependent dioxygenase NDN11_02405 IPR030148 Catecholate siderophore receptor Fiu NDN11_02405 IPR012910 TonB-dependent receptor, plug domain NDN11_02405 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_02405 IPR039423 TonB-dependent receptor-like NDN11_02405 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_02405 IPR010916 TonB box, conserved site NDN11_02405 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_02405 IPR010105 TonB-dependent siderophore receptor NDN11_02410 IPR010917 TonB-dependent receptor, conserved site NDN11_02410 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_02410 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_02410 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_02410 IPR010916 TonB box, conserved site NDN11_02410 IPR039426 Vitamin B12 transporter BtuB-like NDN11_02410 IPR012910 TonB-dependent receptor, plug domain NDN11_02415 IPR005215 Trigger factor NDN11_02415 IPR008880 Trigger factor, C-terminal NDN11_02415 IPR037041 Trigger factor, C-terminal domain superfamily NDN11_02415 IPR008881 Trigger factor, ribosome-binding, bacterial NDN11_02415 IPR036611 Trigger factor ribosome-binding domain superfamily NDN11_02415 IPR027304 Trigger factor/SurA domain superfamily NDN11_02415 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain NDN11_02420 IPR033135 ClpP, histidine active site NDN11_02420 IPR018215 ClpP, Ser active site NDN11_02420 IPR029045 ClpP/crotonase-like domain superfamily NDN11_02420 IPR001907 ATP-dependent Clp protease proteolytic subunit NDN11_02420 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NDN11_02425 IPR003959 ATPase, AAA-type, core NDN11_02425 IPR019489 Clp ATPase, C-terminal NDN11_02425 IPR004487 Clp protease, ATP-binding subunit ClpX NDN11_02425 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_02425 IPR010603 Zinc finger, ClpX C4-type NDN11_02425 IPR038366 Zinc finger, ClpX C4-type superfamily NDN11_02425 IPR003593 AAA+ ATPase domain NDN11_02440 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain NDN11_02440 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily NDN11_02440 IPR011167 Iron-dependent fumarate hydratase NDN11_02440 IPR020557 Fumarate lyase, conserved site NDN11_02440 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain NDN11_02445 IPR023609 Transcription regulator HTH, RhaS NDN11_02445 IPR009057 Homeobox-like domain superfamily NDN11_02445 IPR037923 Transcription regulator HTH-like NDN11_02445 IPR018060 DNA binding HTH domain, AraC-type NDN11_02445 IPR020449 Transcription regulator HTH, AraC- type NDN11_02445 IPR014710 RmlC-like jelly roll fold NDN11_02445 IPR003313 AraC-type arabinose-binding/dimerisation domain NDN11_02445 IPR018062 HTH domain AraC-type, conserved site NDN11_02455 IPR010766 DRTGG NDN11_02455 IPR016475 Phosphate acetyltransferase, bacteria NDN11_02455 IPR004614 Phosphate acetyltransferase NDN11_02455 IPR042113 Phosphate acetyltransferase, domain 1 NDN11_02455 IPR042112 Phosphate acetyltransferase, domain 2 NDN11_02455 IPR002505 Phosphate acetyl/butaryl transferase NDN11_02455 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily NDN11_02455 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_02460 IPR023865 Aliphatic acid kinase, short-chain, conserved site NDN11_02460 IPR004372 Acetate/propionate kinase NDN11_02460 IPR000890 Aliphatic acid kinase, short-chain NDN11_02465 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_02465 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_02465 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_02465 IPR015590 Aldehyde dehydrogenase domain NDN11_02465 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site NDN11_02465 IPR012134 Glutamate-5-semialdehyde dehydrogenase NDN11_02465 IPR000965 GPR domain NDN11_02470 IPR029058 Alpha/Beta hydrolase fold NDN11_02470 IPR000639 Epoxide hydrolase-like NDN11_02470 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase NDN11_02470 IPR000073 Alpha/beta hydrolase fold-1 NDN11_02480 IPR022956 Beta-hexosaminidase, bacterial NDN11_02480 IPR019800 Glycoside hydrolase, family 3, active site NDN11_02480 IPR001764 Glycoside hydrolase, family 3, N-terminal NDN11_02480 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily NDN11_02480 IPR017853 Glycoside hydrolase superfamily NDN11_02485 IPR036034 PDZ superfamily NDN11_02485 IPR040573 Tail specific protease, N-terminal domain NDN11_02485 IPR020992 Tail specific protease, C-terminal NDN11_02485 IPR029045 ClpP/crotonase-like domain superfamily NDN11_02485 IPR004447 C-terminal-processing peptidase S41A NDN11_02485 IPR001478 PDZ domain NDN11_02485 IPR005151 Tail specific protease NDN11_02510 IPR030394 HflX-type guanine nucleotide-binding (G) domain NDN11_02510 IPR032305 GTP-binding protein, middle domain NDN11_02510 IPR006073 GTP binding domain NDN11_02510 IPR016496 GTPase HflX NDN11_02510 IPR025121 GTPase HflX, N-terminal NDN11_02510 IPR042108 GTPase HflX, N-terminal domain superfamily NDN11_02510 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_02510 IPR035647 EF-G domain III/V-like NDN11_02525 IPR030871 Cardiolipin synthase C NDN11_02525 IPR025202 Phospholipase D-like domain NDN11_02525 IPR001736 Phospholipase D/Transphosphatidylase NDN11_02530 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type NDN11_02530 IPR029052 Metallo-dependent phosphatase-like NDN11_02535 IPR036737 OmpA-like domain superfamily NDN11_02535 IPR006690 Outer membrane protein, OmpA-like, conserved site NDN11_02535 IPR006665 OmpA-like domain NDN11_02535 IPR002368 Outer membrane protein, OmpA NDN11_02535 IPR006664 Outer membrane protein, bacterial NDN11_02535 IPR000498 Outer membrane protein OmpA-like, transmembrane domain NDN11_02535 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel NDN11_02540 IPR033417 Periplasmic sensor domain CHASE8 NDN11_02540 IPR029787 Nucleotide cyclase NDN11_02540 IPR003660 HAMP domain NDN11_02540 IPR000160 GGDEF domain NDN11_02580 IPR005939 Beta-lactamase hydrolase-like NDN11_02580 IPR001279 Metallo-beta-lactamase NDN11_02580 IPR029021 Protein-tyrosine phosphatase-like NDN11_02580 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NDN11_02585 IPR029058 Alpha/Beta hydrolase fold NDN11_02585 IPR000073 Alpha/beta hydrolase fold-1 NDN11_02590 IPR005746 Thioredoxin NDN11_02590 IPR036249 Thioredoxin-like superfamily NDN11_02590 IPR017937 Thioredoxin, conserved site NDN11_02590 IPR013766 Thioredoxin domain NDN11_02595 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase NDN11_02595 IPR029069 HotDog domain superfamily NDN11_02595 IPR006683 Thioesterase domain NDN11_02595 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain NDN11_02600 IPR000614 Free Met sulfoxide reductase conserved site NDN11_02600 IPR003018 GAF domain NDN11_02600 IPR029016 GAF-like domain superfamily NDN11_02610 IPR035571 UPF0234-like, C-terminal NDN11_02610 IPR035570 UPF0234, N-terminal NDN11_02610 IPR007551 Protein of unknown function DUF520 NDN11_02610 IPR036183 YajQ-like superfamily NDN11_02620 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC NDN11_02620 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal NDN11_02620 IPR008471 MnmC-like methyltransferase NDN11_02620 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_02620 IPR006076 FAD dependent oxidoreductase NDN11_02635 IPR006008 Intracellular septation protein A NDN11_02640 IPR003141 Polymerase/histidinol phosphatase, N-terminal NDN11_02640 IPR004013 PHP domain NDN11_02640 IPR016195 Polymerase/histidinol phosphatase-like NDN11_02645 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_02645 IPR036390 Winged helix DNA-binding domain superfamily NDN11_02645 IPR005119 LysR, substrate-binding NDN11_02645 IPR000847 Transcription regulator HTH, LysR NDN11_02650 IPR020471 Aldo/keto reductase NDN11_02650 IPR023210 NADP-dependent oxidoreductase domain NDN11_02650 IPR036812 NADP-dependent oxidoreductase domain superfamily NDN11_02655 IPR021134 Bestrophin/UPF0187 NDN11_02660 IPR025657 RadC-like JAB domain NDN11_02660 IPR037518 MPN domain NDN11_02660 IPR001405 Uncharacterised protein family UPF0758 NDN11_02660 IPR010994 RuvA domain 2-like NDN11_02665 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal NDN11_02665 IPR036551 Flavin prenyltransferase-like NDN11_02665 IPR003382 Flavoprotein NDN11_02665 IPR035929 CoaB-like superfamily NDN11_02665 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC NDN11_02675 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_02675 IPR023546 Methylated-DNA--protein-cysteine methyltransferase NDN11_02675 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain NDN11_02675 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain NDN11_02675 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily NDN11_02675 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site NDN11_02675 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding NDN11_02680 IPR018655 Protein of unknown function DUF2086 NDN11_02700 IPR003708 Bacterial protein export chaperone SecB NDN11_02700 IPR035958 SecB-like superfamily NDN11_02705 IPR011767 Glutaredoxin active site NDN11_02705 IPR002109 Glutaredoxin NDN11_02705 IPR014025 Glutaredoxin subgroup NDN11_02705 IPR011900 Glutaredoxin, GrxC NDN11_02705 IPR036249 Thioredoxin-like superfamily NDN11_02715 IPR004881 Ribosome biogenesis GTPase RsgA NDN11_02715 IPR012340 Nucleic acid-binding, OB-fold NDN11_02715 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain NDN11_02715 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_02715 IPR010914 RsgA GTPase domain NDN11_02720 IPR022894 Oligoribonuclease NDN11_02720 IPR012337 Ribonuclease H-like superfamily NDN11_02720 IPR036397 Ribonuclease H superfamily NDN11_02720 IPR013520 Exonuclease, RNase T/DNA polymerase III NDN11_02730 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) NDN11_02730 IPR036291 NAD(P)-binding domain superfamily NDN11_02730 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_02745 IPR010131 RND efflux system, outer membrane lipoprotein, NodT NDN11_02745 IPR003423 Outer membrane efflux protein NDN11_02750 IPR017911 ABC transporter, macrolide export, ATP-binding domain NDN11_02750 IPR025857 MacB-like periplasmic core domain NDN11_02750 IPR003439 ABC transporter-like NDN11_02750 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_02750 IPR003838 ABC transporter permease protein domain NDN11_02750 IPR003593 AAA+ ATPase domain NDN11_02750 IPR017871 ABC transporter, conserved site NDN11_02755 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NDN11_02755 IPR030190 Macrolide export protein MacA NDN11_02755 IPR006143 RND efflux pump, membrane fusion protein NDN11_02760 IPR026590 Sirtuin family, catalytic core domain NDN11_02760 IPR003000 Sirtuin family NDN11_02760 IPR027546 Sirtuin, class III NDN11_02760 IPR026591 Sirtuin, catalytic core small domain superfamily NDN11_02760 IPR029035 DHS-like NAD/FAD-binding domain superfamily NDN11_02775 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_02775 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding NDN11_02775 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain NDN11_02775 IPR015413 Methionyl/Leucyl tRNA synthetase NDN11_02775 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NDN11_02775 IPR002300 Aminoacyl-tRNA synthetase, class Ia NDN11_02775 IPR002302 Leucine-tRNA ligase NDN11_02775 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding NDN11_02775 IPR025709 Leucyl-tRNA synthetase, editing domain NDN11_02785 IPR012846 Acetolactate synthase, large subunit, biosynthetic NDN11_02785 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding NDN11_02785 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain NDN11_02785 IPR012000 Thiamine pyrophosphate enzyme, central domain NDN11_02785 IPR029061 Thiamin diphosphate-binding fold NDN11_02785 IPR029035 DHS-like NAD/FAD-binding domain superfamily NDN11_02785 IPR039368 Acetolactate synthase large subunit, TPP binding domain NDN11_02785 IPR000399 TPP-binding enzyme, conserved site NDN11_02790 IPR004789 Acetolactate synthase, small subunit NDN11_02790 IPR019455 Acetolactate synthase, small subunit, C-terminal NDN11_02790 IPR002912 ACT domain NDN11_02790 IPR039557 AHAS, ACT domain NDN11_02790 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal NDN11_02795 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_02795 IPR013023 Ketol-acid reductoisomerase NDN11_02795 IPR000506 Ketol-acid reductoisomerase, C-terminal NDN11_02795 IPR014359 Ketol-acid reductoisomerase, prokaryotic NDN11_02795 IPR036291 NAD(P)-binding domain superfamily NDN11_02795 IPR013116 Ketol-acid reductoisomerase, N-terminal NDN11_02800 IPR029787 Nucleotide cyclase NDN11_02800 IPR001633 EAL domain NDN11_02800 IPR000160 GGDEF domain NDN11_02800 IPR035919 EAL domain superfamily NDN11_02800 IPR005330 MHYT domain NDN11_02815 IPR001387 Cro/C1-type helix-turn-helix domain NDN11_02815 IPR010982 Lambda repressor-like, DNA-binding domain superfamily NDN11_02835 IPR006659 Arsenate reductase NDN11_02835 IPR006660 Arsenate reductase-like NDN11_02835 IPR036249 Thioredoxin-like superfamily NDN11_02840 IPR011991 ArsR-like helix-turn-helix domain NDN11_02840 IPR018334 ArsR-type transcription regulator, HTH motif NDN11_02840 IPR001845 HTH ArsR-type DNA-binding domain NDN11_02840 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_02840 IPR036390 Winged helix DNA-binding domain superfamily NDN11_02845 IPR004706 Arsenical-resistance protein Acr3 NDN11_02845 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 NDN11_02845 IPR038770 Sodium/solute symporter superfamily NDN11_02855 IPR005594 YadA-like, C-terminal NDN11_02855 IPR008640 Head domain of trimeric autotransporter adhesin NDN11_02855 IPR008635 Coiled stalk of trimeric autotransporter adhesin NDN11_02855 IPR024973 ESPR domain NDN11_02855 IPR011049 Serralysin-like metalloprotease, C-terminal NDN11_02860 IPR036737 OmpA-like domain superfamily NDN11_02860 IPR006664 Outer membrane protein, bacterial NDN11_02860 IPR006665 OmpA-like domain NDN11_02860 IPR037873 BamE-like NDN11_02860 IPR007450 Lipoprotein SmpA/OmlA NDN11_02865 IPR020449 Transcription regulator HTH, AraC- type NDN11_02865 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal NDN11_02865 IPR018060 DNA binding HTH domain, AraC-type NDN11_02865 IPR009057 Homeobox-like domain superfamily NDN11_02870 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_02870 IPR000847 Transcription regulator HTH, LysR NDN11_02870 IPR005119 LysR, substrate-binding NDN11_02870 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain NDN11_02870 IPR036390 Winged helix DNA-binding domain superfamily NDN11_02880 IPR003171 Methylenetetrahydrofolate reductase NDN11_02880 IPR029041 FAD-linked oxidoreductase-like NDN11_02880 IPR004620 5,10-methylenetetrahydrofolate reductase NDN11_02885 IPR002563 Flavin reductase like domain NDN11_02885 IPR019917 FMN reductase (NADH) RutF NDN11_02885 IPR012349 FMN-binding split barrel NDN11_02890 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal NDN11_02890 IPR006276 Cobalamin-independent methionine synthase NDN11_02890 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal NDN11_02890 IPR038071 UROD/MetE-like superfamily NDN11_02900 IPR031157 Tr-type G domain, conserved site NDN11_02900 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_02900 IPR004548 Peptide chain release factor 3 NDN11_02900 IPR004161 Translation elongation factor EFTu-like, domain 2 NDN11_02900 IPR032090 Peptide chain release factor 3, C-terminal NDN11_02900 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily NDN11_02900 IPR041732 Peptide chain release factor 3, GTP-binding domain NDN11_02900 IPR005225 Small GTP-binding protein domain NDN11_02900 IPR000795 Transcription factor, GTP-binding domain NDN11_02900 IPR009000 Translation protein, beta-barrel domain superfamily NDN11_02900 IPR035647 EF-G domain III/V-like NDN11_02910 IPR017219 Peptidoglycan GlcNAc deacetylase NDN11_02910 IPR021729 Domain of unknown function DUF3298 NDN11_02910 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel NDN11_02910 IPR002509 NodB homology domain NDN11_02910 IPR025303 Deacetylase PdaC NDN11_02910 IPR037126 PdaC/RsiV-like superfamily NDN11_02915 IPR001130 TatD family NDN11_02915 IPR015991 Uncharacterised hydrolase TatD-type NDN11_02915 IPR032466 Metal-dependent hydrolase NDN11_02915 IPR018228 Deoxyribonuclease, TatD-related, conserved site NDN11_02920 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain NDN11_02920 IPR036008 Aconitase, iron-sulfur domain NDN11_02920 IPR018136 Aconitase family, 4Fe-4S cluster binding site NDN11_02920 IPR006249 Aconitase/Iron-responsive element-binding protein 2 NDN11_02920 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NDN11_02920 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 NDN11_02920 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain NDN11_02930 IPR035985 Ubiquitin-activating enzyme NDN11_02930 IPR000594 THIF-type NAD/FAD binding fold NDN11_02950 IPR013785 Aldolase-type TIM barrel NDN11_02950 IPR018517 tRNA-dihydrouridine synthase, conserved site NDN11_02950 IPR001269 tRNA-dihydrouridine synthase NDN11_02950 IPR004653 tRNA-dihydrouridine(20/20a) synthase NDN11_02950 IPR035587 DUS-like, FMN-binding domain NDN11_02955 IPR000792 Transcription regulator LuxR, C-terminal NDN11_02955 IPR001789 Signal transduction response regulator, receiver domain NDN11_02955 IPR016032 Signal transduction response regulator, C-terminal effector NDN11_02955 IPR011006 CheY-like superfamily NDN11_02955 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_02960 IPR000014 PAS domain NDN11_02960 IPR011006 CheY-like superfamily NDN11_02960 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NDN11_02960 IPR000700 PAS-associated, C-terminal NDN11_02960 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain NDN11_02960 IPR035965 PAS domain superfamily NDN11_02960 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_02960 IPR001789 Signal transduction response regulator, receiver domain NDN11_02960 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_02960 IPR005467 Histidine kinase domain NDN11_02960 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_02960 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_02960 IPR036641 HPT domain superfamily NDN11_02960 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_02960 IPR013767 PAS fold NDN11_02970 IPR036259 MFS transporter superfamily NDN11_02970 IPR020846 Major facilitator superfamily domain NDN11_02970 IPR011701 Major facilitator superfamily NDN11_02980 IPR036291 NAD(P)-binding domain superfamily NDN11_02980 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NDN11_02980 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NDN11_02980 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 NDN11_02980 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 NDN11_02985 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal NDN11_02990 IPR029035 DHS-like NAD/FAD-binding domain superfamily NDN11_02990 IPR034300 NADP transhydrogenase beta-like domain NDN11_02990 IPR012136 NADP transhydrogenase, beta subunit NDN11_03000 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_03000 IPR005979 Light-dependent protochlorophyllide reductase NDN11_03000 IPR036291 NAD(P)-binding domain superfamily NDN11_03005 IPR000086 NUDIX hydrolase domain NDN11_03005 IPR015797 NUDIX hydrolase-like domain superfamily NDN11_03010 IPR004394 Protein Iojap/ribosomal silencing factor RsfS NDN11_03015 IPR036237 Xylose isomerase-like superfamily NDN11_03015 IPR026040 Hydroxypyruvate isomerase-like NDN11_03015 IPR013022 Xylose isomerase-like, TIM barrel domain NDN11_03020 IPR015815 3-hydroxyisobutyrate dehydrogenase-related NDN11_03020 IPR006398 2-hydroxy-3-oxopropionate reductase NDN11_03020 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain NDN11_03020 IPR036291 NAD(P)-binding domain superfamily NDN11_03020 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding NDN11_03020 IPR013328 6-phosphogluconate dehydrogenase, domain 2 NDN11_03020 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_03020 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site NDN11_03025 IPR029045 ClpP/crotonase-like domain superfamily NDN11_03025 IPR001753 Enoyl-CoA hydratase/isomerase NDN11_03025 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NDN11_03030 IPR003660 HAMP domain NDN11_03030 IPR011006 CheY-like superfamily NDN11_03030 IPR001789 Signal transduction response regulator, receiver domain NDN11_03030 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain NDN11_03030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_03030 IPR036641 HPT domain superfamily NDN11_03030 IPR019247 Histidine kinase BarA, N-terminal NDN11_03030 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_03030 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_03030 IPR005467 Histidine kinase domain NDN11_03030 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_03030 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_03035 IPR005858 Cysteine synthase CysM NDN11_03035 IPR001926 Pyridoxal-phosphate dependent enzyme NDN11_03035 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NDN11_03035 IPR005856 Cysteine synthase NDN11_03035 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site NDN11_03045 IPR012340 Nucleic acid-binding, OB-fold NDN11_03045 IPR010280 (Uracil-5)-methyltransferase family NDN11_03045 IPR002792 TRAM domain NDN11_03045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_03045 IPR030390 RNA methyltransferase TrmA, active site NDN11_03045 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD NDN11_03050 IPR012676 TGS-like NDN11_03050 IPR003607 HD/PDEase domain NDN11_03050 IPR012675 Beta-grasp domain superfamily NDN11_03050 IPR002912 ACT domain NDN11_03050 IPR007685 RelA/SpoT NDN11_03050 IPR004811 RelA/SpoT family NDN11_03050 IPR004095 TGS NDN11_03050 IPR033655 RelA, TGS domain NDN11_03055 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_03055 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_03055 IPR036291 NAD(P)-binding domain superfamily NDN11_03060 IPR011551 NTP pyrophosphohydrolase MazG NDN11_03060 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core NDN11_03065 IPR010994 RuvA domain 2-like NDN11_03065 IPR004509 Competence protein ComEA, helix-hairpin-helix domain NDN11_03070 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain NDN11_03070 IPR002646 Poly A polymerase, head domain NDN11_03070 IPR010206 Poly(A) polymerase I NDN11_03070 IPR025866 Polymerase A arginine-rich C-terminal domain NDN11_03075 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK NDN11_03075 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily NDN11_03080 IPR003700 Ketopantoate hydroxymethyltransferase NDN11_03080 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily NDN11_03080 IPR040442 Pyruvate kinase-like domain superfamily NDN11_03085 IPR004821 Cytidyltransferase-like domain NDN11_03085 IPR003721 Pantoate-beta-alanine ligase NDN11_03085 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain NDN11_03085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_03090 IPR005337 RapZ-like family NDN11_03090 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_03095 IPR035895 HPr-like superfamily NDN11_03095 IPR000032 Phosphocarrier protein HPr-like NDN11_03095 IPR002114 Phosphotransferase system, HPr serine phosphorylation site NDN11_03095 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site NDN11_03100 IPR023153 PSPTO4464-like domain superfamily NDN11_03100 IPR006839 Ribosome-associated, YjgA NDN11_03110 IPR025110 AMP-binding enzyme, C-terminal domain NDN11_03110 IPR042099 AMP-dependent synthetase-like superfamily NDN11_03110 IPR000873 AMP-dependent synthetase/ligase NDN11_03110 IPR020845 AMP-binding, conserved site NDN11_03115 IPR012947 Threonyl/alanyl tRNA synthetase, SAD NDN11_03115 IPR033728 Threonine-tRNA ligase catalytic core domain NDN11_03115 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily NDN11_03115 IPR004095 TGS NDN11_03115 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) NDN11_03115 IPR006195 Aminoacyl-tRNA synthetase, class II NDN11_03115 IPR002320 Threonine-tRNA ligase, class IIa NDN11_03115 IPR036621 Anticodon-binding domain superfamily NDN11_03115 IPR012675 Beta-grasp domain superfamily NDN11_03115 IPR012676 TGS-like NDN11_03115 IPR004154 Anticodon-binding NDN11_03120 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily NDN11_03120 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily NDN11_03120 IPR001288 Translation initiation factor 3 NDN11_03120 IPR019815 Translation initiation factor 3, C-terminal NDN11_03120 IPR019814 Translation initiation factor 3, N-terminal NDN11_03130 IPR004045 Glutathione S-transferase, N-terminal NDN11_03130 IPR036249 Thioredoxin-like superfamily NDN11_03130 IPR004046 Glutathione S-transferase, C-terminal NDN11_03130 IPR010987 Glutathione S-transferase, C-terminal-like NDN11_03130 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NDN11_03145 IPR032816 SNARE associated Golgi protein NDN11_03150 IPR004751 Drug antiporter protein NDN11_03150 IPR011701 Major facilitator superfamily NDN11_03150 IPR020846 Major facilitator superfamily domain NDN11_03150 IPR036259 MFS transporter superfamily NDN11_03155 IPR037229 Ribosomal protein L35 superfamily NDN11_03155 IPR001706 Ribosomal protein L35, non-mitochondrial NDN11_03155 IPR021137 Ribosomal protein L35 NDN11_03155 IPR018265 Ribosomal protein L35, conserved site NDN11_03160 IPR005813 Ribosomal protein L20 NDN11_03160 IPR035566 Ribosomal protein L20, C-terminal NDN11_03185 IPR006195 Aminoacyl-tRNA synthetase, class II NDN11_03185 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit NDN11_03185 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal NDN11_03185 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial NDN11_03185 IPR002319 Phenylalanyl-tRNA synthetase NDN11_03185 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm NDN11_03190 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain NDN11_03190 IPR005147 tRNA synthetase, B5-domain NDN11_03190 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain NDN11_03190 IPR002547 tRNA-binding domain NDN11_03190 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 NDN11_03190 IPR012340 Nucleic acid-binding, OB-fold NDN11_03190 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily NDN11_03190 IPR005121 Ferrodoxin-fold anticodon-binding domain NDN11_03190 IPR009061 Putative DNA-binding domain superfamily NDN11_03190 IPR005146 B3/B4 tRNA-binding domain NDN11_03190 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit NDN11_03195 IPR000119 Histone-like DNA-binding protein NDN11_03195 IPR020816 Histone-like DNA-binding protein, conserved site NDN11_03195 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily NDN11_03195 IPR005684 Integration host factor, alpha subunit NDN11_03205 IPR041703 Transcription termination factor Rho, ATP binding domain NDN11_03205 IPR004665 Transcription termination factor Rho NDN11_03205 IPR011113 Rho termination factor, RNA-binding domain NDN11_03205 IPR036269 Rho termination factor, N-terminal domain superfamily NDN11_03205 IPR011112 Rho termination factor, N-terminal NDN11_03205 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_03205 IPR012340 Nucleic acid-binding, OB-fold NDN11_03205 IPR011129 Cold shock domain NDN11_03205 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain NDN11_03205 IPR003593 AAA+ ATPase domain NDN11_03210 IPR005746 Thioredoxin NDN11_03210 IPR036249 Thioredoxin-like superfamily NDN11_03210 IPR017937 Thioredoxin, conserved site NDN11_03210 IPR013766 Thioredoxin domain NDN11_03215 IPR022371 Exopolyphosphatase NDN11_03215 IPR003695 Ppx/GppA phosphatase NDN11_03215 IPR030673 Pyrophosphatase, GppA/Ppx-type NDN11_03220 IPR029045 ClpP/crotonase-like domain superfamily NDN11_03220 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal NDN11_03220 IPR001095 Acetyl-CoA carboxylase, alpha subunit NDN11_03225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_03225 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal NDN11_03225 IPR012094 tRNA(Ile)-lysidine synthase NDN11_03225 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal NDN11_03225 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain NDN11_03225 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal NDN11_03230 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_03230 IPR036291 NAD(P)-binding domain superfamily NDN11_03230 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal NDN11_03230 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain NDN11_03230 IPR000304 Pyrroline-5-carboxylate reductase NDN11_03235 IPR003425 CCB3/YggT NDN11_03240 IPR002656 Acyltransferase 3 NDN11_03240 IPR036514 SGNH hydrolase superfamily NDN11_03245 IPR002298 DNA polymerase A NDN11_03245 IPR008918 Helix-hairpin-helix motif, class 2 NDN11_03245 IPR001098 DNA-directed DNA polymerase, family A, palm domain NDN11_03245 IPR012337 Ribonuclease H-like superfamily NDN11_03245 IPR036397 Ribonuclease H superfamily NDN11_03245 IPR029060 PIN-like domain superfamily NDN11_03245 IPR018320 DNA polymerase 1 NDN11_03245 IPR036279 5'-3' exonuclease, C-terminal domain superfamily NDN11_03245 IPR019760 DNA-directed DNA polymerase, family A, conserved site NDN11_03245 IPR002421 5'-3' exonuclease, N-terminal NDN11_03245 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal NDN11_03245 IPR002562 3'-5' exonuclease domain NDN11_03245 IPR020045 DNA polymerase I-like, H3TH domain NDN11_03265 IPR042181 Type II secretion system, protein E, N-terminal NDN11_03265 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_03265 IPR001482 Type II/IV secretion system protein NDN11_03265 IPR037257 General secretory system II, protein E, N-terminal superfamily NDN11_03265 IPR013369 Type II secretion system GspE NDN11_03270 IPR019953 Organic hydroperoxide resistance protein famiy NDN11_03270 IPR003718 OsmC/Ohr family NDN11_03270 IPR036102 OsmC/Ohr superfamily NDN11_03270 IPR015946 K homology domain-like, alpha/beta NDN11_03275 IPR036390 Winged helix DNA-binding domain superfamily NDN11_03275 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_03275 IPR000835 MarR-type HTH domain NDN11_03285 IPR003010 Carbon-nitrogen hydrolase NDN11_03285 IPR036526 Carbon-nitrogen hydrolase superfamily NDN11_03285 IPR001110 Uncharacterised protein family UPF0012, conserved site NDN11_03330 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily NDN11_03330 IPR000394 RNA polymerase sigma factor 54 NDN11_03330 IPR007634 RNA polymerase sigma factor 54, DNA-binding NDN11_03330 IPR007046 RNA polymerase sigma factor 54, core-binding domain NDN11_03335 IPR036567 Ribosome hibernation promotion factor-like NDN11_03335 IPR003489 Ribosome hibernation promoting factor/RaiA NDN11_03340 IPR002634 BolA protein NDN11_03340 IPR036065 BolA-like superfamily NDN11_03345 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta NDN11_03345 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase NDN11_03345 IPR001986 Enolpyruvate transferase domain NDN11_03345 IPR020683 Ankyrin repeat-containing domain NDN11_03345 IPR002110 Ankyrin repeat NDN11_03345 IPR036968 Enolpyruvate transferase domain superfamily NDN11_03350 IPR013820 ATP phosphoribosyltransferase, catalytic domain NDN11_03350 IPR001348 ATP phosphoribosyltransferase HisG NDN11_03350 IPR024893 ATP phosphoribosyltransferase HisG, short form NDN11_03350 IPR018198 ATP phosphoribosyltransferase, conserved site NDN11_03355 IPR014284 RNA polymerase sigma-70 like domain NDN11_03355 IPR007627 RNA polymerase sigma-70 region 2 NDN11_03355 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 NDN11_03355 IPR013325 RNA polymerase sigma factor, region 2 NDN11_03355 IPR013324 RNA polymerase sigma factor, region 3/4-like NDN11_03355 IPR037401 SnoaL-like domain NDN11_03355 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_03355 IPR032710 NTF2-like domain superfamily NDN11_03365 IPR012131 Histidinol dehydrogenase NDN11_03365 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_03365 IPR001692 Histidinol dehydrogenase, conserved site NDN11_03365 IPR022695 Histidinol dehydrogenase, monofunctional NDN11_03370 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_03370 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_03370 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_03370 IPR005861 Histidinol-phosphate aminotransferase family NDN11_03370 IPR004839 Aminotransferase, class I/classII NDN11_03375 IPR015890 Chorismate-utilising enzyme, C-terminal NDN11_03375 IPR006805 Anthranilate synthase component I, N-terminal NDN11_03375 IPR005801 ADC synthase NDN11_03375 IPR005802 Aminodeoxychorismate synthase, component I NDN11_03375 IPR019999 Anthranilate synthase component I-like NDN11_03415 IPR023735 Uncharacterised nudix hydrolase NudL NDN11_03415 IPR000059 NUDIX hydrolase, NudL, conserved site NDN11_03415 IPR015797 NUDIX hydrolase-like domain superfamily NDN11_03415 IPR000086 NUDIX hydrolase domain NDN11_03425 IPR000905 Gcp-like domain NDN11_03425 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB NDN11_03430 IPR003824 Undecaprenyl-diphosphatase UppP NDN11_03435 IPR007536 Ribosomal RNA small subunit methyltransferase J NDN11_03435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_03445 IPR029058 Alpha/Beta hydrolase fold NDN11_03445 IPR000801 Putative esterase NDN11_03445 IPR014186 S-formylglutathione hydrolase NDN11_03460 IPR026019 Ribulose-phosphate 3-epimerase NDN11_03460 IPR011060 Ribulose-phosphate binding barrel NDN11_03460 IPR013785 Aldolase-type TIM barrel NDN11_03460 IPR000056 Ribulose-phosphate 3-epimerase-like NDN11_03470 IPR001117 Multicopper oxidase, type 1 NDN11_03470 IPR011707 Multicopper oxidase, type 3 NDN11_03470 IPR006376 Copper-resistance protein CopA NDN11_03470 IPR033138 Multicopper oxidases, conserved site NDN11_03470 IPR002355 Multicopper oxidase, copper-binding site NDN11_03470 IPR008972 Cupredoxin NDN11_03470 IPR034284 Copper resistance protein, first cupredoxin domain NDN11_03470 IPR034282 Copper resistance protein CopA, second cupredoxin domain NDN11_03470 IPR034279 Copper resistance protein, third cupredoxin domain NDN11_03470 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NDN11_03470 IPR011706 Multicopper oxidase, type 2 NDN11_03470 IPR006311 Twin-arginine translocation pathway, signal sequence NDN11_03475 IPR007939 Copper resistance B precursor NDN11_03490 IPR000390 Small multidrug resistance protein family NDN11_03495 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain NDN11_03495 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain NDN11_03495 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_03495 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding NDN11_03495 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site NDN11_03495 IPR023546 Methylated-DNA--protein-cysteine methyltransferase NDN11_03495 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily NDN11_03500 IPR016117 ArgJ-like domain superfamily NDN11_03500 IPR002813 Arginine biosynthesis protein ArgJ NDN11_03500 IPR042195 ArgJ beta chain, C-terminal domain NDN11_03505 IPR036094 Quinolinate synthetase A superfamily NDN11_03505 IPR023513 Quinolinate synthase A, type 1 NDN11_03505 IPR003473 Quinolinate synthetase A NDN11_03535 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_03535 IPR027424 Glucose Oxidase, domain 2 NDN11_03535 IPR012132 Glucose-methanol-choline oxidoreductase NDN11_03535 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal NDN11_03535 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal NDN11_03545 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal NDN11_03545 IPR016471 Nicotinamide phosphoribosyl transferase NDN11_03545 IPR013785 Aldolase-type TIM barrel NDN11_03545 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase NDN11_03550 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type NDN11_03550 IPR005946 Ribose-phosphate pyrophosphokinase NDN11_03550 IPR029057 Phosphoribosyltransferase-like NDN11_03550 IPR000836 Phosphoribosyltransferase domain NDN11_03550 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain NDN11_03550 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site NDN11_03555 IPR011032 GroES-like superfamily NDN11_03555 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site NDN11_03555 IPR013154 Alcohol dehydrogenase, N-terminal NDN11_03555 IPR013149 Alcohol dehydrogenase, C-terminal NDN11_03555 IPR036291 NAD(P)-binding domain superfamily NDN11_03555 IPR020843 Polyketide synthase, enoylreductase domain NDN11_03565 IPR011533 Oxygen-dependent choline dehydrogenase NDN11_03565 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_03565 IPR027424 Glucose Oxidase, domain 2 NDN11_03565 IPR012132 Glucose-methanol-choline oxidoreductase NDN11_03565 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal NDN11_03565 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal NDN11_03570 IPR015590 Aldehyde dehydrogenase domain NDN11_03570 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_03570 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_03570 IPR016160 Aldehyde dehydrogenase, cysteine active site NDN11_03570 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NDN11_03570 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_03570 IPR011264 Betaine aldehyde dehydrogenase NDN11_03575 IPR001647 DNA-binding HTH domain, TetR-type NDN11_03575 IPR009057 Homeobox-like domain superfamily NDN11_03575 IPR017757 Transcriptional repressor BetI NDN11_03575 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NDN11_03575 IPR039538 BetI-type transcriptional repressor, C-terminal NDN11_03580 IPR000060 BCCT transporter family NDN11_03580 IPR018093 BCCT transporter, conserved site NDN11_03585 IPR000060 BCCT transporter family NDN11_03585 IPR018093 BCCT transporter, conserved site NDN11_03600 IPR006231 Malate:quinone-oxidoreductase NDN11_03600 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_03665 IPR012348 Ribonucleotide reductase-like NDN11_03665 IPR009078 Ferritin-like superfamily NDN11_03665 IPR000358 Ribonucleotide reductase small subunit family NDN11_03665 IPR033909 Ribonucleotide reductase small subunit NDN11_03675 IPR005144 ATP-cone domain NDN11_03675 IPR013509 Ribonucleotide reductase large subunit, N-terminal NDN11_03675 IPR000788 Ribonucleotide reductase large subunit, C-terminal NDN11_03675 IPR013346 Ribonucleotide reductase, class I , alpha subunit NDN11_03675 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal NDN11_03675 IPR039718 Ribonucleoside-diphosphate reductase large subunit NDN11_03680 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_03680 IPR039420 Transcriptional regulatory protein WalR-like NDN11_03680 IPR011006 CheY-like superfamily NDN11_03680 IPR016032 Signal transduction response regulator, C-terminal effector NDN11_03680 IPR001867 OmpR/PhoB-type DNA-binding domain NDN11_03680 IPR001789 Signal transduction response regulator, receiver domain NDN11_03685 IPR003660 HAMP domain NDN11_03685 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_03685 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_03685 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_03685 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_03685 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_03685 IPR005467 Histidine kinase domain NDN11_03695 IPR000160 GGDEF domain NDN11_03695 IPR029787 Nucleotide cyclase NDN11_03700 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid NDN11_03700 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 NDN11_03700 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily NDN11_03705 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit NDN11_03705 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit NDN11_03710 IPR023062 NADH dehydrogenase, subunit CD NDN11_03710 IPR010218 NADH dehydrogenase, subunit C NDN11_03710 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H NDN11_03710 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site NDN11_03710 IPR029014 [NiFe]-hydrogenase, large subunit NDN11_03710 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit NDN11_03710 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily NDN11_03710 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily NDN11_03710 IPR001135 NADH-quinone oxidoreductase, subunit D NDN11_03710 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site NDN11_03715 IPR002023 NADH-quinone oxidoreductase subunit E-like NDN11_03715 IPR042128 NuoE domain NDN11_03715 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal NDN11_03715 IPR036249 Thioredoxin-like superfamily NDN11_03720 IPR019554 Soluble ligand binding domain NDN11_03720 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily NDN11_03720 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain NDN11_03720 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily NDN11_03720 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain NDN11_03720 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site NDN11_03720 IPR011537 NADH ubiquinone oxidoreductase, F subunit NDN11_03725 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NDN11_03725 IPR009010 Aspartate decarboxylase-like domain superfamily NDN11_03725 IPR006656 Molybdopterin oxidoreductase NDN11_03725 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain NDN11_03725 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site NDN11_03725 IPR010228 NADH:ubiquinone oxidoreductase, subunit G NDN11_03725 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding NDN11_03725 IPR036010 2Fe-2S ferredoxin-like superfamily NDN11_03730 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H NDN11_03730 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site NDN11_03735 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NDN11_03735 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NDN11_03735 IPR010226 NADH-quinone oxidoreductase, chain I NDN11_03740 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ NDN11_03740 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 NDN11_03745 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K NDN11_03745 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like NDN11_03750 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 NDN11_03750 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup NDN11_03750 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit NDN11_03750 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal NDN11_03755 IPR010227 NADH-quinone oxidoreductase, chain M/4 NDN11_03755 IPR003918 NADH:ubiquinone oxidoreductase NDN11_03755 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit NDN11_03760 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 NDN11_03760 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit NDN11_03765 IPR000836 Phosphoribosyltransferase domain NDN11_03765 IPR029057 Phosphoribosyltransferase-like NDN11_03765 IPR034332 Uracil phosphoribosyltransferase, bacterial-type NDN11_03765 IPR005765 Uracil phosphoribosyl transferase NDN11_03775 IPR010916 TonB box, conserved site NDN11_03775 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_03775 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_03775 IPR039423 TonB-dependent receptor-like NDN11_03775 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_03775 IPR012910 TonB-dependent receptor, plug domain NDN11_03775 IPR030149 TonB-dependent siderophore receptor FcuA/FatA NDN11_03775 IPR010917 TonB-dependent receptor, conserved site NDN11_03775 IPR010105 TonB-dependent siderophore receptor NDN11_03780 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_03780 IPR036390 Winged helix DNA-binding domain superfamily NDN11_03780 IPR005119 LysR, substrate-binding NDN11_03780 IPR000847 Transcription regulator HTH, LysR NDN11_03785 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NDN11_03785 IPR017927 FAD-binding domain, ferredoxin reductase-type NDN11_03785 IPR033892 Ferredoxin--NADP reductase, bacteria NDN11_03785 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NDN11_03785 IPR001433 Oxidoreductase FAD/NAD(P)-binding NDN11_03785 IPR017938 Riboflavin synthase-like beta-barrel NDN11_03800 IPR008910 Conserved TM helix NDN11_03810 IPR023166 HI0933-like insert domain superfamily NDN11_03810 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like NDN11_03810 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_03820 IPR001926 Pyridoxal-phosphate dependent enzyme NDN11_03820 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NDN11_03820 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase NDN11_03820 IPR005966 D-cysteine desulfhydrase NDN11_03825 IPR039562 Membrane fusion protein, biotin-lipoyl like domain NDN11_03845 IPR013216 Methyltransferase type 11 NDN11_03845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_03850 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_03850 IPR010354 Oleate hydratase NDN11_03860 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NDN11_03860 IPR001279 Metallo-beta-lactamase NDN11_03860 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain NDN11_03860 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain NDN11_03860 IPR017782 Hydroxyacylglutathione hydrolase NDN11_03870 IPR029038 Methionyl-tRNA synthetase, Zn-domain NDN11_03870 IPR002547 tRNA-binding domain NDN11_03870 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding NDN11_03870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_03870 IPR012340 Nucleic acid-binding, OB-fold NDN11_03870 IPR033911 Methioninyl-tRNA synthetase core domain NDN11_03870 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain NDN11_03870 IPR014758 Methionyl-tRNA synthetase NDN11_03870 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal NDN11_03870 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NDN11_03870 IPR015413 Methionyl/Leucyl tRNA synthetase NDN11_03870 IPR023458 Methionine-tRNA ligase, type 1 NDN11_03885 IPR000182 GNAT domain NDN11_03885 IPR016181 Acyl-CoA N-acyltransferase NDN11_03895 IPR000808 Mrp, conserved site NDN11_03895 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_03895 IPR034904 Fe-S cluster assembly domain superfamily NDN11_03895 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 NDN11_03895 IPR019591 Mrp/NBP35 ATP-binding protein NDN11_03900 IPR010049 MTA/SAH nucleosidase NDN11_03900 IPR000845 Nucleoside phosphorylase domain NDN11_03900 IPR035994 Nucleoside phosphorylase superfamily NDN11_03915 IPR011962 dCTP deaminase NDN11_03915 IPR029054 dUTPase-like NDN11_03915 IPR036157 dUTPase-like superfamily NDN11_03915 IPR033704 dUTPase, trimeric NDN11_03965 IPR013785 Aldolase-type TIM barrel NDN11_03965 IPR032886 tRNA-dihydrouridine(16) synthase NDN11_03965 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal NDN11_03965 IPR001269 tRNA-dihydrouridine synthase NDN11_03965 IPR018517 tRNA-dihydrouridine synthase, conserved site NDN11_03965 IPR035587 DUS-like, FMN-binding domain NDN11_03980 IPR003593 AAA+ ATPase domain NDN11_03980 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_03980 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily NDN11_03980 IPR013822 Signal recognition particle SRP54, helical bundle NDN11_03980 IPR004125 Signal recognition particle, SRP54 subunit, M-domain NDN11_03980 IPR004780 Signal recognition particle protein NDN11_03980 IPR022941 Signal recognition particle, SRP54 subunit NDN11_03980 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain NDN11_03980 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily NDN11_03990 IPR004619 Type III pantothenate kinase NDN11_04000 IPR002781 Transmembrane protein TauE-like NDN11_04020 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_04020 IPR003395 RecF/RecN/SMC, N-terminal NDN11_04020 IPR024704 Structural maintenance of chromosomes protein NDN11_04020 IPR010935 SMCs flexible hinge NDN11_04020 IPR036277 SMCs flexible hinge superfamily NDN11_04020 IPR011890 Structural maintenance of chromosomes protein, prokaryotic NDN11_04030 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type NDN11_04030 IPR010994 RuvA domain 2-like NDN11_04030 IPR004150 NAD-dependent DNA ligase, OB-fold NDN11_04030 IPR012340 Nucleic acid-binding, OB-fold NDN11_04030 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 NDN11_04030 IPR013839 NAD-dependent DNA ligase, adenylation NDN11_04030 IPR013840 NAD-dependent DNA ligase, N-terminal NDN11_04030 IPR033136 NAD-dependent DNA ligase, conserved site NDN11_04030 IPR018239 NAD-dependent DNA ligase, active site NDN11_04030 IPR041663 DisA/LigA, helix-hairpin-helix motif NDN11_04030 IPR036420 BRCT domain superfamily NDN11_04030 IPR001357 BRCT domain NDN11_04030 IPR001679 NAD-dependent DNA ligase NDN11_04040 IPR009078 Ferritin-like superfamily NDN11_04040 IPR002024 Bacterioferritin NDN11_04040 IPR012347 Ferritin-like NDN11_04040 IPR009040 Ferritin-like diiron domain NDN11_04040 IPR008331 Ferritin/DPS protein domain NDN11_04050 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family NDN11_04050 IPR020846 Major facilitator superfamily domain NDN11_04050 IPR036259 MFS transporter superfamily NDN11_04050 IPR005829 Sugar transporter, conserved site NDN11_04050 IPR011701 Major facilitator superfamily NDN11_04055 IPR004711 Benzoate transporter NDN11_04060 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_04060 IPR036291 NAD(P)-binding domain superfamily NDN11_04060 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_04065 IPR017938 Riboflavin synthase-like beta-barrel NDN11_04065 IPR001433 Oxidoreductase FAD/NAD(P)-binding NDN11_04065 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NDN11_04065 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase NDN11_04065 IPR017927 FAD-binding domain, ferredoxin reductase-type NDN11_04065 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NDN11_04065 IPR012675 Beta-grasp domain superfamily NDN11_04065 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NDN11_04065 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NDN11_04065 IPR036010 2Fe-2S ferredoxin-like superfamily NDN11_04070 IPR032710 NTF2-like domain superfamily NDN11_04070 IPR017641 Benzoate 1,2-dioxygenase, small subunit NDN11_04070 IPR000391 Ring-hydroxylating dioxygenase beta subunit NDN11_04075 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NDN11_04075 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NDN11_04075 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site NDN11_04075 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain NDN11_04075 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit NDN11_04075 IPR017639 Benzoate 1,2-dioxygenase, large subunit NDN11_04080 IPR036390 Winged helix DNA-binding domain superfamily NDN11_04080 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_04080 IPR000847 Transcription regulator HTH, LysR NDN11_04080 IPR005119 LysR, substrate-binding NDN11_04085 IPR024706 Peroxiredoxin, AhpC-type NDN11_04085 IPR036249 Thioredoxin-like superfamily NDN11_04085 IPR013766 Thioredoxin domain NDN11_04085 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant NDN11_04095 IPR029058 Alpha/Beta hydrolase fold NDN11_04095 IPR000073 Alpha/beta hydrolase fold-1 NDN11_04095 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC NDN11_04095 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_04095 IPR013216 Methyltransferase type 11 NDN11_04100 IPR006638 Elp3/MiaB/NifB NDN11_04100 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_04100 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_04100 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_04100 IPR005814 Aminotransferase class-III NDN11_04100 IPR010722 Biotin and thiamin synthesis-associated domain NDN11_04100 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA NDN11_04100 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB NDN11_04100 IPR013785 Aldolase-type TIM barrel NDN11_04100 IPR007197 Radical SAM NDN11_04105 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site NDN11_04105 IPR004839 Aminotransferase, class I/classII NDN11_04105 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type NDN11_04105 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_04105 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_04105 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_04110 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC NDN11_04110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_04115 IPR004472 Dethiobiotin synthase BioD NDN11_04115 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_04125 IPR003400 Biopolymer transport protein ExbD/TolR NDN11_04130 IPR003400 Biopolymer transport protein ExbD/TolR NDN11_04135 IPR002898 MotA/TolQ/ExbB proton channel NDN11_04145 IPR010101 TonB-dependent vitamin B12 transporter BtuB NDN11_04145 IPR039426 Vitamin B12 transporter BtuB-like NDN11_04145 IPR012910 TonB-dependent receptor, plug domain NDN11_04145 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_04145 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_04145 IPR010916 TonB box, conserved site NDN11_04145 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_04145 IPR010917 TonB-dependent receptor, conserved site NDN11_04150 IPR000914 Solute-binding protein family 5 domain NDN11_04150 IPR039424 Solute-binding protein family 5 NDN11_04150 IPR030678 Peptide/nickel binding protein, MppA-type NDN11_04150 IPR023765 Solute-binding protein family 5, conserved site NDN11_04160 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 NDN11_04160 IPR001567 Peptidase M3A/M3B catalytic domain NDN11_04165 IPR035906 MetI-like superfamily NDN11_04165 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_04170 IPR035906 MetI-like superfamily NDN11_04170 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_04170 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NDN11_04175 IPR003593 AAA+ ATPase domain NDN11_04175 IPR003439 ABC transporter-like NDN11_04175 IPR017871 ABC transporter, conserved site NDN11_04175 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal NDN11_04175 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_04180 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F NDN11_04180 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site NDN11_04180 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain NDN11_04180 IPR020103 Pseudouridine synthase, catalytic domain superfamily NDN11_04180 IPR006145 Pseudouridine synthase, RsuA/RluA NDN11_04180 IPR036986 RNA-binding S4 domain superfamily NDN11_04180 IPR002942 RNA-binding S4 domain NDN11_04185 IPR036390 Winged helix DNA-binding domain superfamily NDN11_04185 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_04185 IPR005234 Chromosome segregation/condensation protein ScpB NDN11_04190 IPR003768 Segregation and condensation protein A NDN11_04205 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily NDN11_04205 IPR006070 YrdC-like domain NDN11_04210 IPR007411 Elongation factor P hydroxylase NDN11_04215 IPR003772 Large ribosomal RNA subunit accumulation protein YceD NDN11_04215 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria NDN11_04220 IPR011332 Zinc-binding ribosomal protein NDN11_04220 IPR002677 Ribosomal protein L32p NDN11_04225 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type NDN11_04225 IPR024925 Malonyl CoA-acyl carrier protein transacylase NDN11_04225 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NDN11_04225 IPR014043 Acyl transferase NDN11_04225 IPR001227 Acyl transferase domain superfamily NDN11_04225 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding NDN11_04230 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase NDN11_04230 IPR036291 NAD(P)-binding domain superfamily NDN11_04230 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_04230 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_04235 IPR036736 ACP-like superfamily NDN11_04235 IPR006162 Phosphopantetheine attachment site NDN11_04235 IPR009081 Phosphopantetheine binding ACP domain NDN11_04235 IPR003231 Acyl carrier protein (ACP) NDN11_04240 IPR036779 LysM domain superfamily NDN11_04240 IPR018392 LysM domain NDN11_04240 IPR007055 BON domain NDN11_04240 IPR014004 Transport-associated and nodulation domain, bacteria NDN11_04245 IPR034291 Thiamine phosphate synthase NDN11_04245 IPR022998 Thiamine phosphate synthase/TenI NDN11_04245 IPR004305 Thiaminase-2/PQQC NDN11_04245 IPR029056 Ribokinase-like NDN11_04245 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase NDN11_04245 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase NDN11_04245 IPR016084 Haem oxygenase-like, multi-helical NDN11_04245 IPR013785 Aldolase-type TIM barrel NDN11_04245 IPR036206 Thiamin phosphate synthase superfamily NDN11_04250 IPR036412 HAD-like superfamily NDN11_04250 IPR041492 Haloacid dehalogenase-like hydrolase NDN11_04250 IPR023214 HAD superfamily NDN11_04250 IPR023198 Phosphoglycolate phosphatase-like, domain 2 NDN11_04255 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily NDN11_04255 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB NDN11_04270 IPR014710 RmlC-like jelly roll fold NDN11_04270 IPR002641 Patatin-like phospholipase domain NDN11_04270 IPR000595 Cyclic nucleotide-binding domain NDN11_04270 IPR018490 Cyclic nucleotide-binding-like NDN11_04270 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NDN11_04270 IPR001423 Lysophospholipase patatin, conserved site NDN11_04275 IPR009010 Aspartate decarboxylase-like domain superfamily NDN11_04275 IPR003190 Aspartate decarboxylase NDN11_04280 IPR001328 Peptidyl-tRNA hydrolase NDN11_04280 IPR018171 Peptidyl-tRNA hydrolase, conserved site NDN11_04280 IPR036416 Peptidyl-tRNA hydrolase superfamily NDN11_04285 IPR020055 Ribosomal protein L25, short-form NDN11_04285 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal NDN11_04285 IPR029751 Ribosomal protein L25 NDN11_04285 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily NDN11_04290 IPR029057 Phosphoribosyltransferase-like NDN11_04290 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain NDN11_04290 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type NDN11_04290 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site NDN11_04290 IPR000836 Phosphoribosyltransferase domain NDN11_04290 IPR005946 Ribose-phosphate pyrophosphokinase NDN11_04315 IPR036554 GHMP kinase, C-terminal domain superfamily NDN11_04315 IPR006204 GHMP kinase N-terminal domain NDN11_04315 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase NDN11_04315 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_04315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NDN11_04315 IPR013750 GHMP kinase, C-terminal domain NDN11_04320 IPR029046 Lipoprotein localisation LolA/LolB/LppX NDN11_04320 IPR004565 Outer membrane lipoprotein LolB NDN11_04330 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase NDN11_04330 IPR036291 NAD(P)-binding domain superfamily NDN11_04330 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily NDN11_04330 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal NDN11_04330 IPR018214 Glutamyl-tRNA reductase, conserved site NDN11_04330 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase NDN11_04330 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily NDN11_04330 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain NDN11_04335 IPR030846 DNA primase DnaG, bacteria NDN11_04335 IPR002694 Zinc finger, CHC2-type NDN11_04335 IPR006171 TOPRIM domain NDN11_04335 IPR034151 Bacterial DnaG primase, TOPRIM domain NDN11_04335 IPR036977 DNA Primase, CHC2-type zinc finger NDN11_04335 IPR006295 DNA primase, DnaG NDN11_04335 IPR019475 DNA primase, DnaB-helicase binding domain NDN11_04335 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily NDN11_04335 IPR013264 DNA primase, catalytic core, N-terminal NDN11_04335 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal NDN11_04335 IPR013173 DNA primase DnaG, DnaB-binding domain NDN11_04340 IPR017689 Outer membrane protein assembly factor BamD NDN11_04340 IPR039565 Outer membrane lipoprotein BamD-like NDN11_04340 IPR011990 Tetratricopeptide-like helical domain superfamily NDN11_04345 IPR036986 RNA-binding S4 domain superfamily NDN11_04345 IPR002942 RNA-binding S4 domain NDN11_04345 IPR006145 Pseudouridine synthase, RsuA/RluA NDN11_04345 IPR006225 Pseudouridine synthase, RluC/RluD NDN11_04345 IPR020103 Pseudouridine synthase, catalytic domain superfamily NDN11_04345 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NDN11_04350 IPR003730 Multi-copper polyphenol oxidoreductase NDN11_04350 IPR038371 Multi-copper polyphenol oxidoreductase superfamily NDN11_04350 IPR011324 Cytotoxic necrotizing factor-like, catalytic NDN11_04355 IPR008254 Flavodoxin/nitric oxide synthase NDN11_04355 IPR029039 Flavoprotein-like superfamily NDN11_04355 IPR005025 NADPH-dependent FMN reductase-like NDN11_04360 IPR023620 Small protein B NDN11_04360 IPR000037 SsrA-binding protein NDN11_04360 IPR020081 SsrA-binding protein, conserved site NDN11_04365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_04365 IPR004821 Cytidyltransferase-like domain NDN11_04365 IPR001980 Phosphopantetheine adenylyltransferase NDN11_04370 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NDN11_04370 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NDN11_04395 IPR003010 Carbon-nitrogen hydrolase NDN11_04395 IPR036526 Carbon-nitrogen hydrolase superfamily NDN11_04395 IPR014445 Glutamine-dependent NAD(+) synthetase NDN11_04395 IPR022310 NAD/GMP synthase NDN11_04395 IPR003694 NAD(+) synthetase NDN11_04395 IPR000132 Nitrilase/cyanide hydratase, conserved site NDN11_04395 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_04420 IPR005265 Protoporphyrinogen oxidase HemJ-like NDN11_04425 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NDN11_04425 IPR014030 Beta-ketoacyl synthase, N-terminal NDN11_04425 IPR016039 Thiolase-like NDN11_04425 IPR018201 Beta-ketoacyl synthase, active site NDN11_04425 IPR000794 Beta-ketoacyl synthase NDN11_04425 IPR014031 Beta-ketoacyl synthase, C-terminal NDN11_04435 IPR012340 Nucleic acid-binding, OB-fold NDN11_04435 IPR006032 Ribosomal protein S12/S23 NDN11_04435 IPR005679 Ribosomal protein S12, bacterial-type NDN11_04440 IPR036823 Ribosomal protein S7 domain superfamily NDN11_04440 IPR023798 Ribosomal protein S7 domain NDN11_04440 IPR005717 Ribosomal protein S7, bacterial/organellar-type NDN11_04440 IPR000235 Ribosomal protein S5/S7 NDN11_04440 IPR020606 Ribosomal protein S7, conserved site NDN11_04445 IPR005517 Translation elongation factor EFG/EF2, domain IV NDN11_04445 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NDN11_04445 IPR004540 Translation elongation factor EFG/EF2 NDN11_04445 IPR009000 Translation protein, beta-barrel domain superfamily NDN11_04445 IPR000795 Transcription factor, GTP-binding domain NDN11_04445 IPR005225 Small GTP-binding protein domain NDN11_04445 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_04445 IPR009022 Elongation factor G, domain III NDN11_04445 IPR031157 Tr-type G domain, conserved site NDN11_04445 IPR004161 Translation elongation factor EFTu-like, domain 2 NDN11_04445 IPR000640 Elongation factor EFG, domain V-like NDN11_04445 IPR035649 EFG, domain V NDN11_04445 IPR035647 EF-G domain III/V-like NDN11_04445 IPR041095 Elongation Factor G, domain II NDN11_04445 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_04450 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal NDN11_04450 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle NDN11_04450 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NDN11_04450 IPR009000 Translation protein, beta-barrel domain superfamily NDN11_04450 IPR000795 Transcription factor, GTP-binding domain NDN11_04450 IPR031157 Tr-type G domain, conserved site NDN11_04450 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_04450 IPR033720 Elongation factor Tu, domain 2 NDN11_04450 IPR004161 Translation elongation factor EFTu-like, domain 2 NDN11_04450 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain NDN11_04450 IPR005225 Small GTP-binding protein domain NDN11_04465 IPR000182 GNAT domain NDN11_04465 IPR006464 N-acetyltransferase RimI/Ard1 NDN11_04465 IPR016181 Acyl-CoA N-acyltransferase NDN11_04470 IPR007471 N-end aminoacyl transferase, N-terminal NDN11_04470 IPR007472 N-end rule aminoacyl transferase, C-terminal NDN11_04470 IPR030700 N-end rule aminoacyl transferase NDN11_04470 IPR017138 Aspartate/glutamate leucyltransferase NDN11_04470 IPR016181 Acyl-CoA N-acyltransferase NDN11_04475 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal NDN11_04475 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase NDN11_04475 IPR016181 Acyl-CoA N-acyltransferase NDN11_04480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_04480 IPR018773 Methyltransferase regulatory domain, predicted NDN11_04480 IPR025714 Methyltransferase domain NDN11_04485 IPR023753 FAD/NAD(P)-binding domain NDN11_04485 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site NDN11_04485 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_04485 IPR005982 Thioredoxin reductase NDN11_04490 IPR002543 FtsK domain NDN11_04490 IPR041027 FtsK alpha domain NDN11_04490 IPR025199 DNA translocase FtsK, 4TM region NDN11_04490 IPR018541 FtsK gamma domain NDN11_04490 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_04490 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_04490 IPR036390 Winged helix DNA-binding domain superfamily NDN11_04505 IPR036707 Cell division topological specificity factor MinE superfamily NDN11_04505 IPR005527 Cell division topological specificity factor MinE NDN11_04510 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain NDN11_04510 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_04510 IPR025501 ATP binding protein MinD NDN11_04510 IPR010223 ATP binding protein MinD, bacterial-type NDN11_04515 IPR005526 Septum formation inhibitor MinC, C-terminal NDN11_04515 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily NDN11_04515 IPR013033 Septum formation inhibitor MinC NDN11_04515 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal NDN11_04525 IPR002123 Phospholipid/glycerol acyltransferase NDN11_04530 IPR039567 Glycine zipper domain NDN11_04530 IPR006665 OmpA-like domain NDN11_04530 IPR036737 OmpA-like domain superfamily NDN11_04530 IPR006690 Outer membrane protein, OmpA-like, conserved site NDN11_04530 IPR006664 Outer membrane protein, bacterial NDN11_04535 IPR014016 UvrD-like helicase, ATP-binding domain NDN11_04535 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_04535 IPR005752 ATP-dependent DNA helicase Rep NDN11_04535 IPR000212 DNA helicase, UvrD/REP type NDN11_04535 IPR014017 UvrD-like DNA helicase, C-terminal NDN11_04535 IPR013986 DExx box DNA helicase domain superfamily NDN11_04535 IPR034739 UvrD/AddA helicase, N-terminal NDN11_04540 IPR036157 dUTPase-like superfamily NDN11_04540 IPR033704 dUTPase, trimeric NDN11_04540 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase NDN11_04540 IPR029054 dUTPase-like NDN11_04545 IPR016066 Alpha-D-phosphohexomutase, conserved site NDN11_04545 IPR005841 Alpha-D-phosphohexomutase superfamily NDN11_04545 IPR005843 Alpha-D-phosphohexomutase, C-terminal NDN11_04545 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II NDN11_04545 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III NDN11_04545 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I NDN11_04545 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily NDN11_04545 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III NDN11_04550 IPR036393 Acetylglutamate kinase-like superfamily NDN11_04550 IPR004662 Acetylglutamate kinase family NDN11_04550 IPR037528 Acetylglutamate kinase ArgB NDN11_04550 IPR001048 Aspartate/glutamate/uridylate kinase NDN11_04550 IPR041727 N-Acetyl-L-glutamate kinase, cyclic NDN11_04560 IPR017932 Glutamine amidotransferase type 2 domain NDN11_04560 IPR026869 Putative glutamine amidotransferase type 2 NDN11_04560 IPR029055 Nucleophile aminohydrolases, N-terminal NDN11_04565 IPR016131 Haemerythrin, iron-binding site NDN11_04565 IPR023504 Bacteriohemerythrin-like protein NDN11_04565 IPR012312 Haemerythrin-like NDN11_04565 IPR035938 Hemerythrin-like superfamily NDN11_04565 IPR012827 Haemerythrin, metal-binding domain NDN11_04575 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NDN11_04575 IPR005346 RnfH protein NDN11_04575 IPR037021 RnfH superfamily NDN11_04580 IPR007450 Lipoprotein SmpA/OmlA NDN11_04580 IPR037873 BamE-like NDN11_04580 IPR026592 Outer membrane protein assembly factor BamE NDN11_04585 IPR002481 Ferric-uptake regulator NDN11_04585 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_04585 IPR036390 Winged helix DNA-binding domain superfamily NDN11_04590 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_04590 IPR006321 Pilus retraction protein PilT NDN11_04590 IPR001482 Type II/IV secretion system protein NDN11_04595 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_04595 IPR001482 Type II/IV secretion system protein NDN11_04595 IPR003593 AAA+ ATPase domain NDN11_04595 IPR006321 Pilus retraction protein PilT NDN11_04600 IPR011078 Pyridoxal phosphate homeostasis protein NDN11_04600 IPR001608 Alanine racemase, N-terminal NDN11_04600 IPR029066 PLP-binding barrel NDN11_04610 IPR036412 HAD-like superfamily NDN11_04610 IPR006439 HAD hydrolase, subfamily IA NDN11_04610 IPR041492 Haloacid dehalogenase-like hydrolase NDN11_04610 IPR023214 HAD superfamily NDN11_04610 IPR023198 Phosphoglycolate phosphatase-like, domain 2 NDN11_04610 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic NDN11_04610 IPR037512 Phosphoglycolate phosphatase, prokaryotic NDN11_04620 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_04625 IPR004593 Nuclease SbcCD subunit D NDN11_04625 IPR026843 Nuclease SbcCD subunit D, C-terminal domain NDN11_04625 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain NDN11_04625 IPR029052 Metallo-dependent phosphatase-like NDN11_04625 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type NDN11_04630 IPR029045 ClpP/crotonase-like domain superfamily NDN11_04630 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NDN11_04630 IPR001753 Enoyl-CoA hydratase/isomerase NDN11_04630 IPR014748 Enoyl-CoA hydratase, C-terminal NDN11_04650 IPR036291 NAD(P)-binding domain superfamily NDN11_04650 IPR010099 Epimerase family protein SDR39U1 NDN11_04650 IPR013549 Domain of unknown function DUF1731 NDN11_04650 IPR001509 NAD-dependent epimerase/dehydratase NDN11_04655 IPR006076 FAD dependent oxidoreductase NDN11_04655 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_04655 IPR012727 Glycine oxidase ThiO NDN11_04660 IPR030656 Delta-aminolevulinic acid dehydratase, active site NDN11_04660 IPR001731 Delta-aminolevulinic acid dehydratase NDN11_04660 IPR013785 Aldolase-type TIM barrel NDN11_04665 IPR003736 Phenylacetic acid degradation-related domain NDN11_04665 IPR006683 Thioesterase domain NDN11_04665 IPR029069 HotDog domain superfamily NDN11_04670 IPR013216 Methyltransferase type 11 NDN11_04670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_04675 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NDN11_04675 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit NDN11_04675 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain NDN11_04675 IPR017638 Anthranilate 1,2-dioxygenase, large subunit NDN11_04675 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NDN11_04675 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site NDN11_04680 IPR017640 Anthranilate 1,2-dioxygenase, small subunit NDN11_04680 IPR032710 NTF2-like domain superfamily NDN11_04680 IPR000391 Ring-hydroxylating dioxygenase beta subunit NDN11_04685 IPR017938 Riboflavin synthase-like beta-barrel NDN11_04685 IPR001433 Oxidoreductase FAD/NAD(P)-binding NDN11_04685 IPR017927 FAD-binding domain, ferredoxin reductase-type NDN11_04685 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NDN11_04685 IPR012675 Beta-grasp domain superfamily NDN11_04685 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NDN11_04685 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NDN11_04685 IPR036010 2Fe-2S ferredoxin-like superfamily NDN11_04685 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NDN11_04690 IPR011701 Major facilitator superfamily NDN11_04690 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family NDN11_04690 IPR020846 Major facilitator superfamily domain NDN11_04690 IPR036259 MFS transporter superfamily NDN11_04690 IPR005829 Sugar transporter, conserved site NDN11_04700 IPR005694 Efflux pump membrane protein NDN11_04700 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NDN11_04705 IPR036259 MFS transporter superfamily NDN11_04705 IPR011701 Major facilitator superfamily NDN11_04705 IPR004638 Drug resistance transporter EmrB-like NDN11_04705 IPR020846 Major facilitator superfamily domain NDN11_04715 IPR011010 DNA breaking-rejoining enzyme, catalytic core NDN11_04715 IPR013762 Integrase-like, catalytic domain superfamily NDN11_04715 IPR002104 Integrase, catalytic domain NDN11_04715 IPR038488 Integrase, DNA-binding domain superfamily NDN11_04715 IPR025166 Integrase, DNA-binding domain NDN11_04715 IPR010998 Integrase/recombinase, N-terminal NDN11_04775 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_04775 IPR021961 Protein of unknown function DUF3578 NDN11_04775 IPR003593 AAA+ ATPase domain NDN11_04775 IPR011704 ATPase, dynein-related, AAA domain NDN11_04775 IPR021961 Protein of unknown function DUF3578 NDN11_04775 IPR011704 ATPase, dynein-related, AAA domain NDN11_04775 IPR003593 AAA+ ATPase domain NDN11_04775 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_04800 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_04800 IPR016032 Signal transduction response regulator, C-terminal effector NDN11_04800 IPR011990 Tetratricopeptide-like helical domain superfamily NDN11_04800 IPR000792 Transcription regulator LuxR, C-terminal NDN11_04800 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_04805 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_04805 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_04805 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NDN11_04805 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_04805 IPR016160 Aldehyde dehydrogenase, cysteine active site NDN11_04805 IPR015590 Aldehyde dehydrogenase domain NDN11_04810 IPR002937 Amine oxidase NDN11_04810 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_04810 IPR001613 Flavin amine oxidase NDN11_04815 IPR008640 Head domain of trimeric autotransporter adhesin NDN11_04815 IPR005594 YadA-like, C-terminal NDN11_04815 IPR008635 Coiled stalk of trimeric autotransporter adhesin NDN11_04815 IPR011049 Serralysin-like metalloprotease, C-terminal NDN11_04815 IPR024973 ESPR domain NDN11_04820 IPR006664 Outer membrane protein, bacterial NDN11_04820 IPR036737 OmpA-like domain superfamily NDN11_04820 IPR007450 Lipoprotein SmpA/OmlA NDN11_04820 IPR037873 BamE-like NDN11_04820 IPR006665 OmpA-like domain NDN11_04830 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_04830 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_04830 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent NDN11_04830 IPR015590 Aldehyde dehydrogenase domain NDN11_04830 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_04830 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NDN11_04860 IPR022742 Serine aminopeptidase, S33 NDN11_04860 IPR029058 Alpha/Beta hydrolase fold NDN11_04865 IPR036291 NAD(P)-binding domain superfamily NDN11_04865 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_04875 IPR009057 Homeobox-like domain superfamily NDN11_04875 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NDN11_04875 IPR013570 Transcription regulator YsiA, C-terminal NDN11_04875 IPR001647 DNA-binding HTH domain, TetR-type NDN11_04885 IPR006076 FAD dependent oxidoreductase NDN11_04885 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_04910 IPR008775 Phytanoyl-CoA dioxygenase NDN11_04920 IPR029058 Alpha/Beta hydrolase fold NDN11_04920 IPR000073 Alpha/beta hydrolase fold-1 NDN11_04925 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_04925 IPR020946 Flavin monooxygenase-like NDN11_04950 IPR001829 Pili assembly chaperone, bacterial NDN11_04950 IPR013783 Immunoglobulin-like fold NDN11_04950 IPR008962 PapD-like superfamily NDN11_04950 IPR036316 Pili assembly chaperone, C-terminal domain superfamily NDN11_04950 IPR016148 Pili assembly chaperone, C-terminal NDN11_04950 IPR018046 Pili assembly chaperone, conserved site NDN11_04950 IPR016147 Pili assembly chaperone, N-terminal NDN11_04955 IPR025885 PapC, N-terminal domain NDN11_04955 IPR018030 Fimbrial membrane usher, conserved site NDN11_04955 IPR042186 Outer membrane usher protein FimD, plug domain NDN11_04955 IPR025949 PapC-like, C-terminal domain NDN11_04955 IPR000015 Outer membrane usher protein NDN11_04955 IPR037224 PapC, N-terminal domain superfamily NDN11_04965 IPR016147 Pili assembly chaperone, N-terminal NDN11_04965 IPR018046 Pili assembly chaperone, conserved site NDN11_04965 IPR016148 Pili assembly chaperone, C-terminal NDN11_04965 IPR001829 Pili assembly chaperone, bacterial NDN11_04965 IPR036316 Pili assembly chaperone, C-terminal domain superfamily NDN11_04965 IPR008962 PapD-like superfamily NDN11_04965 IPR013783 Immunoglobulin-like fold NDN11_04970 IPR018060 DNA binding HTH domain, AraC-type NDN11_04970 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal NDN11_04970 IPR009057 Homeobox-like domain superfamily NDN11_04975 IPR036779 LysM domain superfamily NDN11_04975 IPR029058 Alpha/Beta hydrolase fold NDN11_04975 IPR018392 LysM domain NDN11_04975 IPR000801 Putative esterase NDN11_04995 IPR036390 Winged helix DNA-binding domain superfamily NDN11_04995 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_04995 IPR002577 Helix-turn-helix, HxlR type NDN11_04995 IPR011991 ArsR-like helix-turn-helix domain NDN11_05005 IPR036249 Thioredoxin-like superfamily NDN11_05005 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NDN11_05005 IPR004045 Glutathione S-transferase, N-terminal NDN11_05020 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_05020 IPR000524 Transcription regulator HTH, GntR NDN11_05020 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_05020 IPR004839 Aminotransferase, class I/classII NDN11_05020 IPR036390 Winged helix DNA-binding domain superfamily NDN11_05020 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_05025 IPR036409 Class II aldolase/adducin N-terminal domain superfamily NDN11_05025 IPR001303 Class II aldolase/adducin N-terminal NDN11_05030 IPR020624 Schiff base-forming aldolase, conserved site NDN11_05030 IPR002220 DapA-like NDN11_05030 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA NDN11_05030 IPR013785 Aldolase-type TIM barrel NDN11_05030 IPR020625 Schiff base-forming aldolase, active site NDN11_05035 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal NDN11_05035 IPR018060 DNA binding HTH domain, AraC-type NDN11_05035 IPR020449 Transcription regulator HTH, AraC- type NDN11_05035 IPR009057 Homeobox-like domain superfamily NDN11_05040 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_05040 IPR036291 NAD(P)-binding domain superfamily NDN11_05045 IPR023375 Acetoacetate decarboxylase domain superfamily NDN11_05045 IPR023653 Acetoacetate decarboxylase, bacterial NDN11_05045 IPR010451 Acetoacetate decarboxylase NDN11_05050 IPR023753 FAD/NAD(P)-binding domain NDN11_05050 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_05050 IPR013785 Aldolase-type TIM barrel NDN11_05050 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NDN11_05060 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NDN11_05060 IPR009057 Homeobox-like domain superfamily NDN11_05060 IPR001647 DNA-binding HTH domain, TetR-type NDN11_05065 IPR036291 NAD(P)-binding domain superfamily NDN11_05065 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_05065 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_05070 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_05070 IPR020946 Flavin monooxygenase-like NDN11_05075 IPR002168 Lipase, GDXG, putative histidine active site NDN11_05075 IPR013094 Alpha/beta hydrolase fold-3 NDN11_05075 IPR029058 Alpha/Beta hydrolase fold NDN11_05075 IPR033140 Lipase, GDXG, putative serine active site NDN11_05080 IPR003423 Outer membrane efflux protein NDN11_05080 IPR010131 RND efflux system, outer membrane lipoprotein, NodT NDN11_05085 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NDN11_05085 IPR001036 Acriflavin resistance protein NDN11_05090 IPR006143 RND efflux pump, membrane fusion protein NDN11_05090 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NDN11_05100 IPR015358 Transcription regulator MerR, DNA binding NDN11_05100 IPR010211 Redox-sensitive transcriptional activator SoxR NDN11_05100 IPR000551 MerR-type HTH domain NDN11_05100 IPR009061 Putative DNA-binding domain superfamily NDN11_05105 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_05105 IPR039423 TonB-dependent receptor-like NDN11_05105 IPR012910 TonB-dependent receptor, plug domain NDN11_05105 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_05105 IPR011662 Secretin/TonB, short N-terminal domain NDN11_05105 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_05105 IPR010917 TonB-dependent receptor, conserved site NDN11_05105 IPR010105 TonB-dependent siderophore receptor NDN11_05115 IPR003593 AAA+ ATPase domain NDN11_05115 IPR011527 ABC transporter type 1, transmembrane domain NDN11_05115 IPR036640 ABC transporter type 1, transmembrane domain superfamily NDN11_05115 IPR003439 ABC transporter-like NDN11_05115 IPR017871 ABC transporter, conserved site NDN11_05115 IPR013113 FAD-binding 9, siderophore-interacting NDN11_05115 IPR017927 FAD-binding domain, ferredoxin reductase-type NDN11_05115 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NDN11_05115 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_05115 IPR007037 Siderophore-interacting protein, C-terminal domain NDN11_05115 IPR017938 Riboflavin synthase-like beta-barrel NDN11_05120 IPR003593 AAA+ ATPase domain NDN11_05120 IPR036640 ABC transporter type 1, transmembrane domain superfamily NDN11_05120 IPR003439 ABC transporter-like NDN11_05120 IPR017871 ABC transporter, conserved site NDN11_05120 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_05120 IPR011527 ABC transporter type 1, transmembrane domain NDN11_05125 IPR037294 ABC transporter, BtuC-like NDN11_05125 IPR000522 ABC transporter, permease protein, BtuC-like NDN11_05130 IPR037294 ABC transporter, BtuC-like NDN11_05130 IPR000522 ABC transporter, permease protein, BtuC-like NDN11_05135 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_05135 IPR017871 ABC transporter, conserved site NDN11_05135 IPR003593 AAA+ ATPase domain NDN11_05135 IPR003439 ABC transporter-like NDN11_05140 IPR002491 ABC transporter periplasmic binding domain NDN11_05140 IPR033870 FatB domain NDN11_05145 IPR010917 TonB-dependent receptor, conserved site NDN11_05145 IPR030149 TonB-dependent siderophore receptor FcuA/FatA NDN11_05145 IPR039423 TonB-dependent receptor-like NDN11_05145 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_05145 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_05145 IPR010916 TonB box, conserved site NDN11_05145 IPR010105 TonB-dependent siderophore receptor NDN11_05145 IPR012910 TonB-dependent receptor, plug domain NDN11_05145 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_05150 IPR006531 Gp5 N-terminal NDN11_05150 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain NDN11_05150 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset NDN11_05150 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein NDN11_05150 IPR037026 Vgr protein, OB-fold domain superfamily NDN11_05150 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal NDN11_05195 IPR003423 Outer membrane efflux protein NDN11_05195 IPR010131 RND efflux system, outer membrane lipoprotein, NodT NDN11_05200 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 NDN11_05200 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NDN11_05200 IPR001036 Acriflavin resistance protein NDN11_05205 IPR039562 Membrane fusion protein, biotin-lipoyl like domain NDN11_05205 IPR022824 Multidrug resistance protein MdtA NDN11_05205 IPR006143 RND efflux pump, membrane fusion protein NDN11_05210 IPR005119 LysR, substrate-binding NDN11_05210 IPR000847 Transcription regulator HTH, LysR NDN11_05210 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_05210 IPR036390 Winged helix DNA-binding domain superfamily NDN11_05215 IPR011042 Six-bladed beta-propeller, TolB-like NDN11_05215 IPR012938 Glucose/Sorbosone dehydrogenase NDN11_05215 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase NDN11_05230 IPR011701 Major facilitator superfamily NDN11_05230 IPR020846 Major facilitator superfamily domain NDN11_05230 IPR036259 MFS transporter superfamily NDN11_05235 IPR009057 Homeobox-like domain superfamily NDN11_05235 IPR018060 DNA binding HTH domain, AraC-type NDN11_05235 IPR018062 HTH domain AraC-type, conserved site NDN11_05240 IPR036291 NAD(P)-binding domain superfamily NDN11_05240 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal NDN11_05240 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal NDN11_05240 IPR013328 6-phosphogluconate dehydrogenase, domain 2 NDN11_05240 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_05240 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent NDN11_05245 IPR022694 3-hydroxyacyl-CoA dehydrogenase NDN11_05245 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site NDN11_05245 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding NDN11_05245 IPR036291 NAD(P)-binding domain superfamily NDN11_05245 IPR013328 6-phosphogluconate dehydrogenase, domain 2 NDN11_05245 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_05245 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal NDN11_05255 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit NDN11_05255 IPR000120 Amidase NDN11_05255 IPR020556 Amidase, conserved site NDN11_05255 IPR023631 Amidase signature domain NDN11_05255 IPR036928 Amidase signature (AS) superfamily NDN11_05260 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_05260 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_05260 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain NDN11_05260 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_05270 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NDN11_05270 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site NDN11_05270 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit NDN11_05270 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain NDN11_05270 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NDN11_05270 IPR017639 Benzoate 1,2-dioxygenase, large subunit NDN11_05280 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase NDN11_05280 IPR036291 NAD(P)-binding domain superfamily NDN11_05280 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_05280 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_05285 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NDN11_05285 IPR012675 Beta-grasp domain superfamily NDN11_05285 IPR001433 Oxidoreductase FAD/NAD(P)-binding NDN11_05285 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NDN11_05285 IPR000951 Phthalate dioxygenase reductase NDN11_05285 IPR017938 Riboflavin synthase-like beta-barrel NDN11_05285 IPR017927 FAD-binding domain, ferredoxin reductase-type NDN11_05285 IPR036010 2Fe-2S ferredoxin-like superfamily NDN11_05285 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NDN11_05290 IPR002563 Flavin reductase like domain NDN11_05290 IPR012349 FMN-binding split barrel NDN11_05290 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_05290 IPR036390 Winged helix DNA-binding domain superfamily NDN11_05295 IPR003313 AraC-type arabinose-binding/dimerisation domain NDN11_05295 IPR037923 Transcription regulator HTH-like NDN11_05295 IPR018060 DNA binding HTH domain, AraC-type NDN11_05295 IPR014710 RmlC-like jelly roll fold NDN11_05295 IPR020449 Transcription regulator HTH, AraC- type NDN11_05295 IPR023609 Transcription regulator HTH, RhaS NDN11_05295 IPR009057 Homeobox-like domain superfamily NDN11_05300 IPR012854 Copper amine oxidase-like, N-terminal NDN11_05300 IPR000269 Copper amine oxidase NDN11_05300 IPR015798 Copper amine oxidase, catalytic domain NDN11_05300 IPR036460 Copper amine oxidase, catalytic domain superfamily NDN11_05300 IPR016182 Copper amine oxidase, N-terminal NDN11_05300 IPR015800 Copper amine oxidase, N2-terminal NDN11_05300 IPR015802 Copper amine oxidase, N3-terminal NDN11_05300 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily NDN11_05310 IPR012132 Glucose-methanol-choline oxidoreductase NDN11_05310 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_05310 IPR027424 Glucose Oxidase, domain 2 NDN11_05310 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal NDN11_05310 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal NDN11_05315 IPR016160 Aldehyde dehydrogenase, cysteine active site NDN11_05315 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_05315 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NDN11_05315 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_05315 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_05315 IPR015590 Aldehyde dehydrogenase domain NDN11_05320 IPR029058 Alpha/Beta hydrolase fold NDN11_05320 IPR026968 3-oxoadipate enol-lactonase 1/2 NDN11_05320 IPR000073 Alpha/beta hydrolase fold-1 NDN11_05320 IPR022742 Serine aminopeptidase, S33 NDN11_05325 IPR020616 Thiolase, N-terminal NDN11_05325 IPR020613 Thiolase, conserved site NDN11_05325 IPR020617 Thiolase, C-terminal NDN11_05325 IPR020610 Thiolase, active site NDN11_05325 IPR020615 Thiolase, acyl-enzyme intermediate active site NDN11_05325 IPR016039 Thiolase-like NDN11_05325 IPR012793 Beta-ketoadipyl CoA thiolase NDN11_05325 IPR002155 Thiolase NDN11_05330 IPR037171 NagB/RpiA transferase-like NDN11_05330 IPR004164 Coenzyme A transferase active site NDN11_05330 IPR004165 Coenzyme A transferase family I NDN11_05330 IPR012791 3-oxoacid CoA-transferase, subunit B NDN11_05335 IPR004165 Coenzyme A transferase family I NDN11_05335 IPR004163 Coenzyme A transferase binding site NDN11_05335 IPR012792 3-oxoacid CoA-transferase, subunit A NDN11_05335 IPR037171 NagB/RpiA transferase-like NDN11_05340 IPR015889 Intradiol ring-cleavage dioxygenase, core NDN11_05340 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal NDN11_05340 IPR007535 Catechol dioxygenase, N-terminal NDN11_05340 IPR012801 Catechol 1,2-dioxygenase, proteobacteria NDN11_05345 IPR011008 Dimeric alpha-beta barrel NDN11_05345 IPR026029 Muconolactone isomerase domain NDN11_05345 IPR003464 Muconolactone delta-isomerase NDN11_05350 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain NDN11_05350 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NDN11_05350 IPR036849 Enolase-like, C-terminal domain superfamily NDN11_05350 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site NDN11_05350 IPR029065 Enolase C-terminal domain-like NDN11_05350 IPR029017 Enolase-like, N-terminal NDN11_05350 IPR013370 Muconate/chloromuconate cycloisomerase NDN11_05355 IPR036390 Winged helix DNA-binding domain superfamily NDN11_05355 IPR005119 LysR, substrate-binding NDN11_05355 IPR000847 Transcription regulator HTH, LysR NDN11_05355 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_05360 IPR005318 Outer membrane porin, bacterial NDN11_05360 IPR023614 Porin domain superfamily NDN11_05370 IPR010917 TonB-dependent receptor, conserved site NDN11_05370 IPR039426 Vitamin B12 transporter BtuB-like NDN11_05370 IPR012910 TonB-dependent receptor, plug domain NDN11_05370 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_05370 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_05370 IPR010916 TonB box, conserved site NDN11_05370 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_05390 IPR010917 TonB-dependent receptor, conserved site NDN11_05390 IPR010105 TonB-dependent siderophore receptor NDN11_05390 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_05390 IPR012910 TonB-dependent receptor, plug domain NDN11_05390 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_05390 IPR011662 Secretin/TonB, short N-terminal domain NDN11_05390 IPR039423 TonB-dependent receptor-like NDN11_05390 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_05400 IPR013324 RNA polymerase sigma factor, region 3/4-like NDN11_05400 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_05400 IPR039425 RNA polymerase sigma-70 like NDN11_05400 IPR014284 RNA polymerase sigma-70 like domain NDN11_05400 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site NDN11_05400 IPR007627 RNA polymerase sigma-70 region 2 NDN11_05400 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 NDN11_05400 IPR013325 RNA polymerase sigma factor, region 2 NDN11_05405 IPR039562 Membrane fusion protein, biotin-lipoyl like domain NDN11_05405 IPR006143 RND efflux pump, membrane fusion protein NDN11_05405 IPR022824 Multidrug resistance protein MdtA NDN11_05410 IPR001036 Acriflavin resistance protein NDN11_05410 IPR022831 Multidrug resistance protein MdtB NDN11_05410 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NDN11_05415 IPR023931 Multidrug resistance protein MdtC NDN11_05415 IPR001036 Acriflavin resistance protein NDN11_05415 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NDN11_05420 IPR003423 Outer membrane efflux protein NDN11_05420 IPR010131 RND efflux system, outer membrane lipoprotein, NodT NDN11_05425 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NDN11_05425 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_05425 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_05425 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type NDN11_05425 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_05425 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_05450 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_05450 IPR039423 TonB-dependent receptor-like NDN11_05450 IPR012910 TonB-dependent receptor, plug domain NDN11_05460 IPR036291 NAD(P)-binding domain superfamily NDN11_05460 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_05460 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_05465 IPR023667 NAD-dependent malic enzyme, proteobacteria NDN11_05465 IPR036291 NAD(P)-binding domain superfamily NDN11_05465 IPR001891 Malic oxidoreductase NDN11_05465 IPR012302 Malic enzyme, NAD-binding NDN11_05465 IPR037062 Malic enzyme, N-terminal domain superfamily NDN11_05465 IPR012301 Malic enzyme, N-terminal domain NDN11_05465 IPR015884 Malic enzyme, conserved site NDN11_05475 IPR014362 Glutamate dehydrogenase NDN11_05475 IPR036291 NAD(P)-binding domain superfamily NDN11_05475 IPR033922 NAD(P) binding domain of glutamate dehydrogenase NDN11_05475 IPR033524 Leu/Phe/Val dehydrogenases active site NDN11_05475 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase NDN11_05475 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain NDN11_05475 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal NDN11_05480 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_05480 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria NDN11_05480 IPR004636 Acetylornithine/Succinylornithine transaminase family NDN11_05480 IPR005814 Aminotransferase class-III NDN11_05480 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_05480 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_05480 IPR026330 Succinylornithine transaminase NDN11_05485 IPR016181 Acyl-CoA N-acyltransferase NDN11_05485 IPR007041 Arginine N-succinyltransferase AstA/AruG NDN11_05485 IPR017650 Arginine N-succinyltransferase NDN11_05490 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_05490 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_05490 IPR016160 Aldehyde dehydrogenase, cysteine active site NDN11_05490 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NDN11_05490 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_05490 IPR015590 Aldehyde dehydrogenase domain NDN11_05490 IPR017649 Succinylglutamate-semialdehyde dehydrogenase NDN11_05495 IPR037031 Succinylarginine dihydrolase superfamily NDN11_05495 IPR007079 Succinylarginine dihydrolase NDN11_05500 IPR007036 Succinylglutamate desuccinylase/aspartoacylase NDN11_05500 IPR016681 Succinylglutamate desuccinylase NDN11_05505 IPR004841 Amino acid permease/ SLC12A domain NDN11_05505 IPR004840 Amino acid permease, conserved site NDN11_05515 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type NDN11_05515 IPR007498 Intermembrane transport protein PqiA-like NDN11_05520 IPR003399 Mce/MlaD NDN11_05530 IPR001031 Thioesterase NDN11_05530 IPR009081 Phosphopantetheine binding ACP domain NDN11_05530 IPR020802 Polyketide synthase, thioesterase domain NDN11_05530 IPR001242 Condensation domain NDN11_05530 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily NDN11_05530 IPR020806 Polyketide synthase, phosphopantetheine-binding domain NDN11_05530 IPR000873 AMP-dependent synthetase/ligase NDN11_05530 IPR020845 AMP-binding, conserved site NDN11_05530 IPR025110 AMP-binding enzyme, C-terminal domain NDN11_05530 IPR029058 Alpha/Beta hydrolase fold NDN11_05530 IPR010071 Amino acid adenylation domain NDN11_05530 IPR042099 AMP-dependent synthetase-like superfamily NDN11_05530 IPR036736 ACP-like superfamily NDN11_05535 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily NDN11_05535 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NDN11_05535 IPR033879 Undecaprenyl-diphosphatase NDN11_05555 IPR010263 Type VI secretion protein, VC_A0114 NDN11_05565 IPR017729 Type VI secretion system, ATPase ClpV1 NDN11_05565 IPR019489 Clp ATPase, C-terminal NDN11_05565 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_05565 IPR041546 ClpA/ClpB, AAA lid domain NDN11_05565 IPR018368 ClpA/B, conserved site 1 NDN11_05565 IPR001270 ClpA/B family NDN11_05565 IPR004176 Clp, N-terminal NDN11_05565 IPR003959 ATPase, AAA-type, core NDN11_05565 IPR003593 AAA+ ATPase domain NDN11_05565 IPR036628 Clp, N-terminal domain superfamily NDN11_05575 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 NDN11_05580 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath NDN11_05595 IPR010272 Type VI secretion system, TssF-like NDN11_05610 IPR009612 IcmF-related NDN11_05610 IPR025743 IcmF-related, N-terminal domain NDN11_05610 IPR010623 Type VI secretion system IcmF, C-terminal NDN11_05610 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_05610 IPR017731 Type VI secretion system, IcmF NDN11_05620 IPR036737 OmpA-like domain superfamily NDN11_05620 IPR039567 Glycine zipper domain NDN11_05620 IPR006664 Outer membrane protein, bacterial NDN11_05620 IPR006665 OmpA-like domain NDN11_05620 IPR006690 Outer membrane protein, OmpA-like, conserved site NDN11_05630 IPR005950 Molybdate ABC transporter, substrate-binding protein NDN11_05635 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_05635 IPR035906 MetI-like superfamily NDN11_05635 IPR011867 Molybdate ABC transporter, permease protein NDN11_05640 IPR004606 Molybdenum-pterin binding NDN11_05640 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_05640 IPR008995 Molybdate/tungstate binding, C-terminal NDN11_05640 IPR015852 ABC transporter, molybdenum import, ModC NDN11_05640 IPR017871 ABC transporter, conserved site NDN11_05640 IPR003439 ABC transporter-like NDN11_05640 IPR003593 AAA+ ATPase domain NDN11_05640 IPR011868 Molybdate ABC transporter, ATP-binding protein NDN11_05640 IPR005116 Transport-associated OB, type 1 NDN11_05650 IPR002524 Cation efflux protein NDN11_05650 IPR027470 Cation efflux protein, cytoplasmic domain NDN11_05650 IPR036837 Cation efflux protein, cytoplasmic domain superfamily NDN11_05650 IPR027469 Cation efflux transmembrane domain superfamily NDN11_05660 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_05660 IPR005119 LysR, substrate-binding NDN11_05660 IPR036390 Winged helix DNA-binding domain superfamily NDN11_05660 IPR000847 Transcription regulator HTH, LysR NDN11_05665 IPR004778 Homoserine/Threonine efflux protein NDN11_05665 IPR001123 Amino acid exporter protein, LeuE-type NDN11_05670 IPR000192 Aminotransferase class V domain NDN11_05670 IPR010970 Cysteine desulfurase, SufS NDN11_05670 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_05670 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_05670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_05680 IPR011004 Trimeric LpxA-like superfamily NDN11_05680 IPR001451 Hexapeptide repeat NDN11_05680 IPR042122 Serine acetyltransferase, N-terminal domain superfamily NDN11_05685 IPR001763 Rhodanese-like domain NDN11_05685 IPR023695 Thiosulfate sulfurtransferase, bacterial NDN11_05685 IPR036873 Rhodanese-like domain superfamily NDN11_05690 IPR010068 Taurine ABC transporter, substrate-binding protein TauA NDN11_05690 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain NDN11_05690 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NDN11_05695 IPR003439 ABC transporter-like NDN11_05695 IPR017871 ABC transporter, conserved site NDN11_05695 IPR015859 ABC transporter, taurine import, TauD NDN11_05695 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_05695 IPR003593 AAA+ ATPase domain NDN11_05700 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_05700 IPR035906 MetI-like superfamily NDN11_05705 IPR042098 Taurine dioxygenase TauD-like superfamily NDN11_05705 IPR006189 CHASE domain NDN11_05705 IPR003819 TauD/TfdA-like domain NDN11_05710 IPR009057 Homeobox-like domain superfamily NDN11_05710 IPR018060 DNA binding HTH domain, AraC-type NDN11_05710 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal NDN11_05715 IPR006823 Neutral/alkaline nonlysosomal ceramidase NDN11_05715 IPR038445 Neutral ceramidase, C-terminal domain superfamily NDN11_05715 IPR031331 Neutral/alkaline non-lysosomal ceramidase, C-terminal NDN11_05715 IPR031329 Neutral/alkaline non-lysosomal ceramidase, N-terminal NDN11_05740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_05740 IPR006015 Universal stress protein A family NDN11_05740 IPR006016 UspA NDN11_05760 IPR036821 Peptide deformylase superfamily NDN11_05760 IPR023635 Peptide deformylase NDN11_05765 IPR002645 STAS domain NDN11_05765 IPR036513 STAS domain superfamily NDN11_05765 IPR012338 Beta-lactamase/transpeptidase-like NDN11_05765 IPR015868 Glutaminase NDN11_05785 IPR000489 Pterin-binding domain NDN11_05785 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily NDN11_05785 IPR004223 Vitamin B12-dependent methionine synthase, activation domain NDN11_05785 IPR036594 Methionine synthase domain NDN11_05785 IPR011005 Dihydropteroate synthase-like NDN11_05785 IPR033706 Methionine synthase, B12-binding domain NDN11_05785 IPR006158 Cobalamin (vitamin B12)-binding domain NDN11_05785 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain NDN11_05785 IPR011822 Cobalamin-dependent methionine synthase NDN11_05785 IPR003726 Homocysteine-binding domain NDN11_05785 IPR036589 Homocysteine-binding domain superfamily NDN11_05785 IPR036724 Cobalamin-binding domain superfamily NDN11_05790 IPR001204 Phosphate transporter NDN11_05800 IPR003593 AAA+ ATPase domain NDN11_05800 IPR004504 DNA repair protein RadA NDN11_05800 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_05800 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain NDN11_05800 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NDN11_05800 IPR041166 LapB, rubredoxin metal binding domain NDN11_05800 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_05805 IPR001463 Sodium:alanine symporter NDN11_05810 IPR004841 Amino acid permease/ SLC12A domain NDN11_05810 IPR004840 Amino acid permease, conserved site NDN11_05820 IPR000183 Ornithine/DAP/Arg decarboxylase NDN11_05820 IPR029066 PLP-binding barrel NDN11_05820 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site NDN11_05820 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site NDN11_05820 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal NDN11_05820 IPR002986 Diaminopimelate decarboxylase, LysA NDN11_05820 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal NDN11_05820 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal NDN11_05825 IPR018510 Diaminopimelate epimerase, active site NDN11_05825 IPR001653 Diaminopimelate epimerase, DapF NDN11_05830 IPR004778 Homoserine/Threonine efflux protein NDN11_05830 IPR001123 Amino acid exporter protein, LeuE-type NDN11_05835 IPR023009 Tyrosine recombinase XerC/XerD NDN11_05835 IPR011931 Tyrosine recombinase XerC NDN11_05835 IPR004107 Integrase, SAM-like, N-terminal NDN11_05835 IPR002104 Integrase, catalytic domain NDN11_05835 IPR013762 Integrase-like, catalytic domain superfamily NDN11_05835 IPR011010 DNA breaking-rejoining enzyme, catalytic core NDN11_05835 IPR010998 Integrase/recombinase, N-terminal NDN11_05840 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site NDN11_05840 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal NDN11_05840 IPR012255 Electron transfer flavoprotein, beta subunit NDN11_05840 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal NDN11_05840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_05845 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal NDN11_05845 IPR001308 Electron transfer flavoprotein alpha subunit/FixB NDN11_05845 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal NDN11_05845 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal NDN11_05845 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site NDN11_05845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_05845 IPR029035 DHS-like NAD/FAD-binding domain superfamily NDN11_05855 IPR005743 DNA gyrase, subunit A NDN11_05855 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat NDN11_05855 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal NDN11_05855 IPR013760 DNA topoisomerase, type IIA-like domain superfamily NDN11_05855 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal NDN11_05855 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta NDN11_05855 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily NDN11_05880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_05880 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_05880 IPR000192 Aminotransferase class V domain NDN11_05880 IPR022278 Phosphoserine aminotransferase NDN11_05880 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site NDN11_05880 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_05895 IPR003791 Protein of unknown function UPF0178 NDN11_05910 IPR025857 MacB-like periplasmic core domain NDN11_05910 IPR003838 ABC transporter permease protein domain NDN11_05910 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E NDN11_05915 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_05915 IPR015854 ABC transporter, lipoprotein release, LolD NDN11_05915 IPR017871 ABC transporter, conserved site NDN11_05915 IPR003593 AAA+ ATPase domain NDN11_05915 IPR003439 ABC transporter-like NDN11_05920 IPR035681 ComA-like, MBL domain NDN11_05920 IPR004477 ComEC/Rec2-related protein NDN11_05920 IPR004797 Competence protein ComEC/Rec2 NDN11_05920 IPR025405 Domain of unknown function DUF4131 NDN11_05920 IPR001279 Metallo-beta-lactamase NDN11_05920 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NDN11_05930 IPR029045 ClpP/crotonase-like domain superfamily NDN11_05930 IPR023171 Na/H antiporter domain superfamily NDN11_05930 IPR004670 Na+/H+ antiporter NhaA NDN11_05930 IPR002142 Peptidase S49 NDN11_05940 IPR004607 Phosphoribosylglycinamide formyltransferase NDN11_05940 IPR036477 Formyl transferase, N-terminal domain superfamily NDN11_05940 IPR002376 Formyl transferase, N-terminal NDN11_05940 IPR001555 Phosphoribosylglycinamide formyltransferase, active site NDN11_05945 IPR036921 PurM-like, N-terminal domain superfamily NDN11_05945 IPR016188 PurM-like, N-terminal domain NDN11_05945 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase NDN11_05945 IPR010918 PurM-like, C-terminal domain NDN11_05945 IPR036676 PurM-like, C-terminal domain superfamily NDN11_05950 IPR002549 Transmembrane protein TqsA-like NDN11_05955 IPR013159 Chromosomal replication initiator, DnaA C-terminal NDN11_05955 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_05955 IPR038454 DnaA, N-terminal domain superfamily NDN11_05955 IPR024633 DnaA N-terminal domain NDN11_05955 IPR013317 Chromosomal replication initiator protein DnaA NDN11_05955 IPR010921 Trp repressor/replication initiator NDN11_05955 IPR020591 Chromosomal replication control, initiator DnaA-like NDN11_05955 IPR001957 Chromosomal replication control, initiator DnaA NDN11_05955 IPR003593 AAA+ ATPase domain NDN11_05955 IPR018312 Chromosomal replication control, initiator DnaA, conserved site NDN11_05985 IPR029028 Alpha/beta knot methyltransferases NDN11_05985 IPR029064 50S ribosomal protein L30e-like NDN11_05985 IPR001537 tRNA/rRNA methyltransferase, SpoU type NDN11_05985 IPR013123 RNA 2-O ribose methyltransferase, substrate binding NDN11_05985 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NDN11_05990 IPR000146 Fructose-1,6-bisphosphatase class 1 NDN11_05990 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal NDN11_05990 IPR028343 Fructose-1,6-bisphosphatase NDN11_06000 IPR039001 Peptidoglycan-associated lipoprotein NDN11_06000 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal NDN11_06000 IPR036737 OmpA-like domain superfamily NDN11_06000 IPR006690 Outer membrane protein, OmpA-like, conserved site NDN11_06000 IPR006665 OmpA-like domain NDN11_06000 IPR006664 Outer membrane protein, bacterial NDN11_06005 IPR011042 Six-bladed beta-propeller, TolB-like NDN11_06005 IPR011659 WD40-like Beta Propeller NDN11_06005 IPR014167 Tol-Pal system protein TolB NDN11_06005 IPR007195 TolB, N-terminal NDN11_06005 IPR036752 TolB, N-terminal domain superfamily NDN11_06015 IPR003400 Biopolymer transport protein ExbD/TolR NDN11_06015 IPR014168 Tol-Pal system protein TolR NDN11_06020 IPR002898 MotA/TolQ/ExbB proton channel NDN11_06020 IPR014163 Tol-Pal system, TolQ NDN11_06025 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site NDN11_06025 IPR029069 HotDog domain superfamily NDN11_06025 IPR006683 Thioesterase domain NDN11_06025 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase NDN11_06025 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family NDN11_06035 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_06035 IPR008823 RuvB C-terminal winged helix domain NDN11_06035 IPR008824 RuvB-like P-loop domain NDN11_06035 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_06035 IPR036390 Winged helix DNA-binding domain superfamily NDN11_06035 IPR041445 RuvB, AAA lid domain NDN11_06035 IPR003593 AAA+ ATPase domain NDN11_06035 IPR004605 DNA helicase, Holliday junction RuvB-type NDN11_06040 IPR011114 Holliday junction DNA helicase RuvA, C-terminal NDN11_06040 IPR010994 RuvA domain 2-like NDN11_06040 IPR000085 Bacterial DNA recombination protein RuvA NDN11_06040 IPR036267 RuvA, C-terminal domain superfamily NDN11_06040 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 NDN11_06040 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial NDN11_06040 IPR012340 Nucleic acid-binding, OB-fold NDN11_06045 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily NDN11_06045 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal NDN11_06045 IPR006261 dNTP triphosphohydrolase NDN11_06045 IPR023024 dNTP triphosphohydrolase, type 3 NDN11_06045 IPR003607 HD/PDEase domain NDN11_06045 IPR006674 HD domain NDN11_06055 IPR036921 PurM-like, N-terminal domain superfamily NDN11_06055 IPR010918 PurM-like, C-terminal domain NDN11_06055 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily NDN11_06055 IPR036676 PurM-like, C-terminal domain superfamily NDN11_06055 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain NDN11_06055 IPR029062 Class I glutamine amidotransferase-like NDN11_06055 IPR017926 Glutamine amidotransferase NDN11_06055 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal NDN11_06055 IPR010073 Phosphoribosylformylglycinamidine synthase PurL NDN11_06060 IPR004812 Drug resistance transporter Bcr/CmlA subfamily NDN11_06060 IPR011701 Major facilitator superfamily NDN11_06060 IPR020846 Major facilitator superfamily domain NDN11_06060 IPR036259 MFS transporter superfamily NDN11_06070 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 NDN11_06070 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily NDN11_06070 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria NDN11_06070 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal NDN11_06075 IPR018193 Glycerate kinase, flavodoxin-like fold NDN11_06075 IPR004381 Glycerate kinase NDN11_06075 IPR018197 Glycerate kinase, restriction-enzyme-like fold NDN11_06075 IPR036129 Glycerate kinase superfamily NDN11_06080 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NDN11_06080 IPR001753 Enoyl-CoA hydratase/isomerase NDN11_06080 IPR029045 ClpP/crotonase-like domain superfamily NDN11_06085 IPR004821 Cytidyltransferase-like domain NDN11_06085 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain NDN11_06085 IPR015797 NUDIX hydrolase-like domain superfamily NDN11_06085 IPR020084 NUDIX hydrolase, conserved site NDN11_06085 IPR000086 NUDIX hydrolase domain NDN11_06085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_06100 IPR036249 Thioredoxin-like superfamily NDN11_06100 IPR013766 Thioredoxin domain NDN11_06100 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant NDN11_06105 IPR018317 Queuosine biosynthesis protein QueC NDN11_06105 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_06115 IPR018317 Queuosine biosynthesis protein QueC NDN11_06115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_06120 IPR007197 Radical SAM NDN11_06120 IPR024924 7-carboxy-7-deazaguanine synthase-like NDN11_06120 IPR013785 Aldolase-type TIM barrel NDN11_06125 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily NDN11_06125 IPR011004 Trimeric LpxA-like superfamily NDN11_06125 IPR018357 Hexapeptide transferase, conserved site NDN11_06125 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 NDN11_06125 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family NDN11_06125 IPR001451 Hexapeptide repeat NDN11_06135 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain NDN11_06135 IPR005119 LysR, substrate-binding NDN11_06135 IPR000847 Transcription regulator HTH, LysR NDN11_06135 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_06135 IPR036390 Winged helix DNA-binding domain superfamily NDN11_06140 IPR005666 Sulphate transport system permease protein 1 NDN11_06140 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_06140 IPR008995 Molybdate/tungstate binding, C-terminal NDN11_06140 IPR017871 ABC transporter, conserved site NDN11_06140 IPR003593 AAA+ ATPase domain NDN11_06140 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal NDN11_06140 IPR024765 TOBE-like domain NDN11_06140 IPR003439 ABC transporter-like NDN11_06145 IPR035906 MetI-like superfamily NDN11_06145 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_06145 IPR005667 Sulphate ABC transporter permease protein 2 NDN11_06145 IPR011866 Sulphate ABC transporter, permease protein CysW NDN11_06150 IPR011865 Sulphate ABC transporter, permease protein CysT NDN11_06150 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_06150 IPR035906 MetI-like superfamily NDN11_06150 IPR005667 Sulphate ABC transporter permease protein 2 NDN11_06160 IPR005669 Thiosulphate/Sulfate-binding protein NDN11_06160 IPR000957 Sulphate/thiosulphate-binding, conserved site NDN11_06160 IPR034408 Sulphate/thiosulphate-binding site NDN11_06165 IPR001544 Aminotransferase class IV NDN11_06165 IPR018300 Aminotransferase, class IV, conserved site NDN11_06165 IPR036038 Aminotransferase-like, PLP-dependent enzymes NDN11_06165 IPR017824 Aminodeoxychorismate lyase, class IV NDN11_06170 IPR003770 Endolytic murein transglycosylase NDN11_06175 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_06175 IPR039430 Thymidylate kinase-like domain NDN11_06175 IPR018094 Thymidylate kinase NDN11_06185 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain NDN11_06185 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily NDN11_06185 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal NDN11_06185 IPR005288 L-aspartate oxidase NDN11_06185 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily NDN11_06185 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_06190 IPR001478 PDZ domain NDN11_06190 IPR036034 PDZ superfamily NDN11_06190 IPR011782 Peptidase S1C, Do NDN11_06190 IPR009003 Peptidase S1, PA clan NDN11_06190 IPR001940 Peptidase S1C NDN11_06200 IPR031157 Tr-type G domain, conserved site NDN11_06200 IPR005225 Small GTP-binding protein domain NDN11_06200 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_06200 IPR035654 Elongation factor 4, domain IV NDN11_06200 IPR013842 GTP-binding protein LepA, C-terminal NDN11_06200 IPR038363 LepA, C-terminal domain superfamily NDN11_06200 IPR000640 Elongation factor EFG, domain V-like NDN11_06200 IPR004161 Translation elongation factor EFTu-like, domain 2 NDN11_06200 IPR000795 Transcription factor, GTP-binding domain NDN11_06200 IPR035647 EF-G domain III/V-like NDN11_06200 IPR006297 Elongation factor 4 NDN11_06205 IPR019758 Peptidase S26A, signal peptidase I, conserved site NDN11_06205 IPR000223 Peptidase S26A, signal peptidase I NDN11_06205 IPR019533 Peptidase S26 NDN11_06205 IPR019757 Peptidase S26A, signal peptidase I, lysine active site NDN11_06205 IPR036286 LexA/Signal peptidase-like superfamily NDN11_06205 IPR019756 Peptidase S26A, signal peptidase I, serine active site NDN11_06215 IPR000999 Ribonuclease III domain NDN11_06215 IPR011907 Ribonuclease III NDN11_06215 IPR014720 Double-stranded RNA-binding domain NDN11_06215 IPR036389 Ribonuclease III, endonuclease domain superfamily NDN11_06220 IPR005225 Small GTP-binding protein domain NDN11_06220 IPR009019 K homology domain superfamily, prokaryotic type NDN11_06220 IPR004044 K Homology domain, type 2 NDN11_06220 IPR015946 K homology domain-like, alpha/beta NDN11_06220 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_06220 IPR005662 GTP-binding protein Era NDN11_06220 IPR030388 Era-type guanine nucleotide-binding (G) domain NDN11_06220 IPR006073 GTP binding domain NDN11_06230 IPR037278 ARFGAP/RecO-like zinc finger NDN11_06230 IPR022572 DNA replication/recombination mediator RecO, N-terminal NDN11_06230 IPR012340 Nucleic acid-binding, OB-fold NDN11_06230 IPR003717 Recombination protein O, RecO NDN11_06235 IPR013785 Aldolase-type TIM barrel NDN11_06235 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ NDN11_06235 IPR036130 Pyridoxine 5'-phosphate synthase NDN11_06240 IPR012347 Ferritin-like NDN11_06240 IPR010386 tRNA-hydroxylase MiaE NDN11_06240 IPR009078 Ferritin-like superfamily NDN11_06255 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain NDN11_06255 IPR002646 Poly A polymerase, head domain NDN11_06255 IPR012006 tRNA nucleotidyltransferase, proteobacteria NDN11_06255 IPR003607 HD/PDEase domain NDN11_06260 IPR015884 Malic enzyme, conserved site NDN11_06260 IPR012301 Malic enzyme, N-terminal domain NDN11_06260 IPR037062 Malic enzyme, N-terminal domain superfamily NDN11_06260 IPR012302 Malic enzyme, NAD-binding NDN11_06260 IPR012188 NAD(P)-dependent malic enzyme NDN11_06260 IPR036291 NAD(P)-binding domain superfamily NDN11_06260 IPR042113 Phosphate acetyltransferase, domain 1 NDN11_06260 IPR042112 Phosphate acetyltransferase, domain 2 NDN11_06260 IPR002505 Phosphate acetyl/butaryl transferase NDN11_06265 IPR001633 EAL domain NDN11_06265 IPR035919 EAL domain superfamily NDN11_06265 IPR000160 GGDEF domain NDN11_06265 IPR005330 MHYT domain NDN11_06265 IPR029787 Nucleotide cyclase NDN11_06270 IPR015947 PUA-like superfamily NDN11_06270 IPR029028 Alpha/beta knot methyltransferases NDN11_06270 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NDN11_06270 IPR006700 Ribosomal RNA small subunit methyltransferase E NDN11_06275 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase NDN11_06275 IPR029041 FAD-linked oxidoreductase-like NDN11_06275 IPR004620 5,10-methylenetetrahydrofolate reductase NDN11_06275 IPR003171 Methylenetetrahydrofolate reductase NDN11_06280 IPR036291 NAD(P)-binding domain superfamily NDN11_06280 IPR042172 Adenosylhomocysteinase-like superfamily NDN11_06280 IPR000043 Adenosylhomocysteinase-like NDN11_06280 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NDN11_06280 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site NDN11_06290 IPR001279 Metallo-beta-lactamase NDN11_06290 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NDN11_06290 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain NDN11_06290 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain NDN11_06290 IPR017782 Hydroxyacylglutathione hydrolase NDN11_06305 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_06305 IPR035906 MetI-like superfamily NDN11_06310 IPR003439 ABC transporter-like NDN11_06310 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_06310 IPR018449 NIL domain NDN11_06310 IPR003593 AAA+ ATPase domain NDN11_06310 IPR026253 Methionine import ATP-binding protein MetN NDN11_06310 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain NDN11_06310 IPR017871 ABC transporter, conserved site NDN11_06310 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal NDN11_06315 IPR004872 Lipoprotein NlpA family NDN11_06320 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily NDN11_06320 IPR011054 Rudiment single hybrid motif NDN11_06320 IPR020559 Phosphoribosylglycinamide synthetase, conserved site NDN11_06320 IPR020560 Phosphoribosylglycinamide synthetase, C-domain NDN11_06320 IPR000115 Phosphoribosylglycinamide synthetase NDN11_06320 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NDN11_06320 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal NDN11_06320 IPR013815 ATP-grasp fold, subdomain 1 NDN11_06320 IPR011761 ATP-grasp fold NDN11_06320 IPR016185 Pre-ATP-grasp domain superfamily NDN11_06325 IPR002695 Bifunctional purine biosynthesis protein PurH-like NDN11_06325 IPR036914 Methylglyoxal synthase-like domain superfamily NDN11_06325 IPR011607 Methylglyoxal synthase-like domain NDN11_06325 IPR024051 AICAR transformylase, duplicated domain superfamily NDN11_06325 IPR016193 Cytidine deaminase-like NDN11_06330 IPR005412 DNA-binding protein Fis NDN11_06330 IPR009057 Homeobox-like domain superfamily NDN11_06330 IPR002197 DNA binding HTH domain, Fis-type NDN11_06340 IPR004498 Ribosomal protein L11 methyltransferase NDN11_06340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_06350 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_06350 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related NDN11_06350 IPR026904 GidA associated domain 3 NDN11_06350 IPR020595 MnmG-related, conserved site NDN11_06350 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG NDN11_06355 IPR000390 Small multidrug resistance protein family NDN11_06365 IPR018060 DNA binding HTH domain, AraC-type NDN11_06365 IPR009057 Homeobox-like domain superfamily NDN11_06365 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal NDN11_06375 IPR024932 Flavin transferase ApbE NDN11_06375 IPR003374 ApbE-like superfamily NDN11_06375 IPR042159 Flavin-trafficking protein ApbE NDN11_06385 IPR017938 Riboflavin synthase-like beta-barrel NDN11_06385 IPR001433 Oxidoreductase FAD/NAD(P)-binding NDN11_06385 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily NDN11_06385 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NDN11_06385 IPR029039 Flavoprotein-like superfamily NDN11_06385 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase NDN11_06385 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria NDN11_06385 IPR001094 Flavodoxin-like NDN11_06385 IPR017927 FAD-binding domain, ferredoxin reductase-type NDN11_06385 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding NDN11_06385 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain NDN11_06385 IPR008254 Flavodoxin/nitric oxide synthase NDN11_06400 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_06400 IPR010105 TonB-dependent siderophore receptor NDN11_06400 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_06400 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_06400 IPR012910 TonB-dependent receptor, plug domain NDN11_06400 IPR039423 TonB-dependent receptor-like NDN11_06410 IPR026033 Azaguanine-like transporters NDN11_06410 IPR006043 Xanthine/uracil/vitamin C permease NDN11_06415 IPR032466 Metal-dependent hydrolase NDN11_06415 IPR001365 Adenosine/AMP deaminase domain NDN11_06415 IPR028892 Adenine deaminase type 2 NDN11_06415 IPR006330 Adenosine/adenine deaminase NDN11_06420 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase NDN11_06420 IPR016174 Di-haem cytochrome, transmembrane NDN11_06430 IPR022898 Ribonuclease HII NDN11_06430 IPR001352 Ribonuclease HII/HIII NDN11_06430 IPR024567 Ribonuclease HII/HIII domain NDN11_06430 IPR012337 Ribonuclease H-like superfamily NDN11_06430 IPR036397 Ribonuclease H superfamily NDN11_06435 IPR003751 Translational regulator CsrA NDN11_06435 IPR036107 Carbon storage regulator superfamily NDN11_06440 IPR001341 Aspartate kinase NDN11_06440 IPR005260 Aspartate kinase, monofunctional class NDN11_06440 IPR018042 Aspartate kinase, conserved site NDN11_06440 IPR001048 Aspartate/glutamate/uridylate kinase NDN11_06440 IPR027795 CASTOR, ACT domain NDN11_06440 IPR002912 ACT domain NDN11_06440 IPR036393 Acetylglutamate kinase-like superfamily NDN11_06440 IPR041740 Aspartokinase catalytic domain NDN11_06445 IPR002318 Alanine-tRNA ligase, class IIc NDN11_06445 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily NDN11_06445 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain NDN11_06445 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal NDN11_06445 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria NDN11_06445 IPR003156 DHHA1 domain NDN11_06445 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily NDN11_06445 IPR009000 Translation protein, beta-barrel domain superfamily NDN11_06445 IPR012947 Threonyl/alanyl tRNA synthetase, SAD NDN11_06450 IPR036291 NAD(P)-binding domain superfamily NDN11_06450 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I NDN11_06450 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain NDN11_06450 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family NDN11_06450 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site NDN11_06450 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain NDN11_06460 IPR023072 Acetyltransferase, YpeA NDN11_06460 IPR016181 Acyl-CoA N-acyltransferase NDN11_06460 IPR000182 GNAT domain NDN11_06465 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain NDN11_06465 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit NDN11_06465 IPR004517 ATP phosphoribosyltransferase regulatory subunit NDN11_06470 IPR018220 Adenylosuccinate synthase, GTP-binding site NDN11_06470 IPR033128 Adenylosuccinate synthase, active site NDN11_06470 IPR042109 Adenylosuccinate synthetase, domain 1 NDN11_06470 IPR042110 Adenylosuccinate synthetase, domain 2 NDN11_06470 IPR042111 Adenylosuccinate synthetase, domain 3 NDN11_06470 IPR001114 Adenylosuccinate synthetase NDN11_06470 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_06485 IPR025841 Circularly permuted ATP-grasp type 2 NDN11_06485 IPR016450 Uncharacterised conserved protein UCP005522 NDN11_06495 IPR013589 Bacterial transglutaminase-like, N-terminal NDN11_06495 IPR038765 Papain-like cysteine peptidase superfamily NDN11_06495 IPR002931 Transglutaminase-like NDN11_06510 IPR029066 PLP-binding barrel NDN11_06510 IPR000821 Alanine racemase NDN11_06510 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal NDN11_06510 IPR011079 Alanine racemase, C-terminal NDN11_06510 IPR001608 Alanine racemase, N-terminal NDN11_06515 IPR007693 DNA helicase, DnaB-like, N-terminal NDN11_06515 IPR007694 DNA helicase, DnaB-like, C-terminal NDN11_06515 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_06515 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal NDN11_06515 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily NDN11_06515 IPR007692 DNA helicase, DnaB type NDN11_06515 IPR003593 AAA+ ATPase domain NDN11_06520 IPR011991 ArsR-like helix-turn-helix domain NDN11_06520 IPR002577 Helix-turn-helix, HxlR type NDN11_06520 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_06520 IPR036390 Winged helix DNA-binding domain superfamily NDN11_06525 IPR003680 Flavodoxin-like fold NDN11_06525 IPR029039 Flavoprotein-like superfamily NDN11_06530 IPR036935 Ribosomal protein L9, N-terminal domain superfamily NDN11_06530 IPR020070 Ribosomal protein L9, N-terminal NDN11_06530 IPR036791 Ribosomal protein L9, C-terminal domain superfamily NDN11_06530 IPR020069 Ribosomal protein L9, C-terminal NDN11_06530 IPR020594 Ribosomal protein L9, bacteria/chloroplast NDN11_06530 IPR000244 Ribosomal protein L9 NDN11_06530 IPR009027 Ribosomal protein L9/RNase H1, N-terminal NDN11_06535 IPR001648 Ribosomal protein S18 NDN11_06535 IPR036870 Ribosomal protein S18 superfamily NDN11_06535 IPR018275 Ribosomal protein S18, conserved site NDN11_06540 IPR035980 Ribosomal protein S6 superfamily NDN11_06540 IPR020814 Ribosomal protein S6, plastid/chloroplast NDN11_06540 IPR020815 Ribosomal protein S6, conserved site NDN11_06540 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 NDN11_06540 IPR000529 Ribosomal protein S6 NDN11_06550 IPR006369 Protohaem IX farnesyltransferase NDN11_06550 IPR000537 UbiA prenyltransferase family NDN11_06550 IPR030470 UbiA prenyltransferase conserved site NDN11_06555 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes NDN11_06555 IPR014210 Cytochrome o ubiquinol oxidase subunit IV NDN11_06560 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle NDN11_06560 IPR033946 Ubiquinol oxidase subunit III domain NDN11_06560 IPR014206 Cytochrome o ubiquinol oxidase, subunit III NDN11_06560 IPR035973 Cytochrome c oxidase subunit III-like superfamily NDN11_06560 IPR024791 Cytochrome c oxidase subunit III NDN11_06560 IPR000298 Cytochrome c oxidase subunit III-like NDN11_06565 IPR014207 Cytochrome o ubiquinol oxidase, subunit I NDN11_06565 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site NDN11_06565 IPR036927 Cytochrome c oxidase-like, subunit I superfamily NDN11_06565 IPR023616 Cytochrome c oxidase-like, subunit I domain NDN11_06565 IPR000883 Cytochrome c oxidase subunit I NDN11_06570 IPR002429 Cytochrome c oxidase subunit II-like C-terminal NDN11_06570 IPR006333 Cytochrome o ubiquinol oxidase subunit II NDN11_06570 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily NDN11_06570 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain NDN11_06570 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain NDN11_06570 IPR008972 Cupredoxin NDN11_06570 IPR010514 COX aromatic rich motif NDN11_06580 IPR018274 PEP-utilising enzyme, active site NDN11_06580 IPR013815 ATP-grasp fold, subdomain 1 NDN11_06580 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily NDN11_06580 IPR006319 Phosphoenolpyruvate synthase NDN11_06580 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding NDN11_06580 IPR036637 Phosphohistidine domain superfamily NDN11_06580 IPR023151 PEP-utilising enzyme, conserved site NDN11_06580 IPR000121 PEP-utilising enzyme, C-terminal NDN11_06580 IPR040442 Pyruvate kinase-like domain superfamily NDN11_06580 IPR008279 PEP-utilising enzyme, mobile domain NDN11_06585 IPR005177 Bifunctional kinase-pyrophosphorylase NDN11_06585 IPR026530 Phosphoenolpyruvate synthase regulatory protein NDN11_06590 IPR001633 EAL domain NDN11_06590 IPR035919 EAL domain superfamily NDN11_06590 IPR000160 GGDEF domain NDN11_06590 IPR035965 PAS domain superfamily NDN11_06590 IPR029787 Nucleotide cyclase NDN11_06590 IPR005330 MHYT domain NDN11_06595 IPR019949 Luciferase family oxidoreductase, group 1 NDN11_06595 IPR011251 Luciferase-like domain NDN11_06595 IPR036661 Luciferase-like domain superfamily NDN11_06605 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain NDN11_06605 IPR020103 Pseudouridine synthase, catalytic domain superfamily NDN11_06605 IPR006145 Pseudouridine synthase, RsuA/RluA NDN11_06605 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F NDN11_06605 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site NDN11_06605 IPR002942 RNA-binding S4 domain NDN11_06605 IPR036986 RNA-binding S4 domain superfamily NDN11_06610 IPR024170 Aminoglycoside N6-acetyltransferase NDN11_06610 IPR000182 GNAT domain NDN11_06610 IPR016181 Acyl-CoA N-acyltransferase NDN11_06620 IPR036986 RNA-binding S4 domain superfamily NDN11_06620 IPR002942 RNA-binding S4 domain NDN11_06620 IPR006145 Pseudouridine synthase, RsuA/RluA NDN11_06620 IPR006225 Pseudouridine synthase, RluC/RluD NDN11_06620 IPR020103 Pseudouridine synthase, catalytic domain superfamily NDN11_06620 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NDN11_06630 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_06630 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE NDN11_06635 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_06635 IPR013507 DNA mismatch repair protein, S5 domain 2-like NDN11_06635 IPR002099 DNA mismatch repair protein family, N-terminal NDN11_06635 IPR020667 DNA mismatch repair protein, MutL NDN11_06635 IPR014762 DNA mismatch repair, conserved site NDN11_06635 IPR042120 MutL, C-terminal domain, dimerisation subdomain NDN11_06635 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms NDN11_06635 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NDN11_06635 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_06635 IPR037198 MutL, C-terminal domain superfamily NDN11_06635 IPR042121 MutL, C-terminal domain, regulatory subdomain NDN11_06635 IPR014790 MutL, C-terminal, dimerisation NDN11_06640 IPR039657 Dimethylallyltransferase NDN11_06640 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_06640 IPR018022 IPP transferase NDN11_06645 IPR005001 RNA-binding protein Hfq NDN11_06645 IPR010920 LSM domain superfamily NDN11_06660 IPR003680 Flavodoxin-like fold NDN11_06660 IPR029039 Flavoprotein-like superfamily NDN11_06665 IPR033878 Nitroreductase NfsB-like NDN11_06665 IPR029479 Nitroreductase NDN11_06665 IPR000415 Nitroreductase-like NDN11_06670 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type NDN11_06670 IPR029052 Metallo-dependent phosphatase-like NDN11_06670 IPR010138 UDP-2,3-diacylglucosamine hydrolase NDN11_06675 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase NDN11_06675 IPR029000 Cyclophilin-like domain superfamily NDN11_06675 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site NDN11_06675 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain NDN11_06680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_06680 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily NDN11_06680 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal NDN11_06680 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily NDN11_06680 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain NDN11_06680 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain NDN11_06680 IPR000924 Glutamyl/glutaminyl-tRNA synthetase NDN11_06680 IPR022861 Glutamine-tRNA ligase, bacterial NDN11_06680 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NDN11_06680 IPR004514 Glutamine-tRNA synthetase NDN11_06685 IPR006274 Carbamoyl-phosphate synthase, small subunit NDN11_06685 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily NDN11_06685 IPR029062 Class I glutamine amidotransferase-like NDN11_06685 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain NDN11_06685 IPR017926 Glutamine amidotransferase NDN11_06685 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain NDN11_06695 IPR010285 DNA helicase Pif1-like NDN11_06695 IPR029491 Helicase Helix-turn-helix domain NDN11_06695 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_06695 IPR003593 AAA+ ATPase domain NDN11_06715 IPR005119 LysR, substrate-binding NDN11_06715 IPR000847 Transcription regulator HTH, LysR NDN11_06715 IPR036390 Winged helix DNA-binding domain superfamily NDN11_06715 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_06720 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site NDN11_06720 IPR024084 Isopropylmalate dehydrogenase-like domain NDN11_06720 IPR011829 Tartrate dehydrogenase NDN11_06725 IPR000060 BCCT transporter family NDN11_06730 IPR013094 Alpha/beta hydrolase fold-3 NDN11_06730 IPR029058 Alpha/Beta hydrolase fold NDN11_06735 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit NDN11_06735 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain NDN11_06735 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site NDN11_06735 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NDN11_06735 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NDN11_06735 IPR039004 Carnitine monooxygenase oxygenase subunit NDN11_06740 IPR015590 Aldehyde dehydrogenase domain NDN11_06740 IPR010102 Succinate semialdehyde dehydrogenase NDN11_06740 IPR016160 Aldehyde dehydrogenase, cysteine active site NDN11_06740 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_06740 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_06740 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_06740 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NDN11_06745 IPR036010 2Fe-2S ferredoxin-like superfamily NDN11_06745 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NDN11_06745 IPR017938 Riboflavin synthase-like beta-barrel NDN11_06745 IPR039003 Carnitine monooxygenase reductase subunit NDN11_06745 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NDN11_06745 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NDN11_06745 IPR017927 FAD-binding domain, ferredoxin reductase-type NDN11_06745 IPR001433 Oxidoreductase FAD/NAD(P)-binding NDN11_06745 IPR000951 Phthalate dioxygenase reductase NDN11_06745 IPR012675 Beta-grasp domain superfamily NDN11_06745 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NDN11_06750 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_06750 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_06750 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_06750 IPR004839 Aminotransferase, class I/classII NDN11_06750 IPR022518 Aspartate 4-decarboxylase NDN11_06750 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site NDN11_06755 IPR022457 Aspartate-alanine antiporter NDN11_06755 IPR006037 Regulator of K+ conductance, C-terminal NDN11_06755 IPR006512 YidE/YbjL duplication NDN11_06755 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily NDN11_06760 IPR024973 ESPR domain NDN11_06760 IPR008635 Coiled stalk of trimeric autotransporter adhesin NDN11_06760 IPR008640 Head domain of trimeric autotransporter adhesin NDN11_06760 IPR011049 Serralysin-like metalloprotease, C-terminal NDN11_06760 IPR008635 Coiled stalk of trimeric autotransporter adhesin NDN11_06760 IPR011049 Serralysin-like metalloprotease, C-terminal NDN11_06760 IPR008640 Head domain of trimeric autotransporter adhesin NDN11_06760 IPR005594 YadA-like, C-terminal NDN11_06760 IPR024973 ESPR domain NDN11_06760 IPR005594 YadA-like, C-terminal NDN11_06765 IPR007450 Lipoprotein SmpA/OmlA NDN11_06765 IPR006664 Outer membrane protein, bacterial NDN11_06765 IPR037873 BamE-like NDN11_06765 IPR036737 OmpA-like domain superfamily NDN11_06765 IPR006665 OmpA-like domain NDN11_06770 IPR036390 Winged helix DNA-binding domain superfamily NDN11_06770 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_06770 IPR005471 Transcription regulator IclR, N-terminal NDN11_06770 IPR014757 Transcription regulator IclR, C-terminal NDN11_06770 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR NDN11_06770 IPR029016 GAF-like domain superfamily NDN11_06775 IPR037171 NagB/RpiA transferase-like NDN11_06775 IPR012792 3-oxoacid CoA-transferase, subunit A NDN11_06775 IPR004165 Coenzyme A transferase family I NDN11_06775 IPR004163 Coenzyme A transferase binding site NDN11_06780 IPR004164 Coenzyme A transferase active site NDN11_06780 IPR004165 Coenzyme A transferase family I NDN11_06780 IPR037171 NagB/RpiA transferase-like NDN11_06780 IPR012791 3-oxoacid CoA-transferase, subunit B NDN11_06785 IPR012793 Beta-ketoadipyl CoA thiolase NDN11_06785 IPR002155 Thiolase NDN11_06785 IPR016039 Thiolase-like NDN11_06785 IPR020615 Thiolase, acyl-enzyme intermediate active site NDN11_06785 IPR020610 Thiolase, active site NDN11_06785 IPR020617 Thiolase, C-terminal NDN11_06785 IPR020613 Thiolase, conserved site NDN11_06785 IPR020616 Thiolase, N-terminal NDN11_06790 IPR008948 L-Aspartase-like NDN11_06790 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase NDN11_06790 IPR022761 Fumarate lyase, N-terminal NDN11_06790 IPR020557 Fumarate lyase, conserved site NDN11_06790 IPR024083 Fumarase/histidase, N-terminal NDN11_06790 IPR019468 Adenylosuccinate lyase C-terminal NDN11_06790 IPR000362 Fumarate lyase family NDN11_06795 IPR029058 Alpha/Beta hydrolase fold NDN11_06795 IPR000073 Alpha/beta hydrolase fold-1 NDN11_06795 IPR026968 3-oxoadipate enol-lactonase 1/2 NDN11_06800 IPR020846 Major facilitator superfamily domain NDN11_06800 IPR005829 Sugar transporter, conserved site NDN11_06800 IPR011701 Major facilitator superfamily NDN11_06800 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family NDN11_06800 IPR036259 MFS transporter superfamily NDN11_06805 IPR012788 4-carboxymuconolactone decarboxylase NDN11_06805 IPR029032 AhpD-like NDN11_06805 IPR003779 Carboxymuconolactone decarboxylase-like NDN11_06810 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit NDN11_06810 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal NDN11_06810 IPR015889 Intradiol ring-cleavage dioxygenase, core NDN11_06810 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal NDN11_06815 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit NDN11_06815 IPR015889 Intradiol ring-cleavage dioxygenase, core NDN11_06815 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal NDN11_06820 IPR018508 3-dehydroquinate dehydratase, active site NDN11_06820 IPR013785 Aldolase-type TIM barrel NDN11_06820 IPR001381 3-dehydroquinate dehydratase type I NDN11_06825 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain NDN11_06825 IPR006626 Parallel beta-helix repeat NDN11_06825 IPR012334 Pectin lyase fold NDN11_06825 IPR011050 Pectin lyase fold/virulence factor NDN11_06830 IPR007049 Carbohydrate-selective porin OprB NDN11_06830 IPR038673 Carbohydrate-selective porin OprB superfamily NDN11_06835 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NDN11_06835 IPR017511 PQQ-dependent membrane bound dehydrogenase NDN11_06835 IPR002372 Pyrrolo-quinoline quinone repeat NDN11_06835 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NDN11_06835 IPR001479 Quinoprotein dehydrogenase, conserved site NDN11_06845 IPR014306 Hydroxyisourate hydrolase NDN11_06845 IPR023418 Transthyretin, thyroxine binding site NDN11_06845 IPR000895 Transthyretin/hydroxyisourate hydrolase NDN11_06845 IPR023416 Transthyretin/hydroxyisourate hydrolase domain NDN11_06845 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily NDN11_06845 IPR023419 Transthyretin, conserved site NDN11_06850 IPR017588 Uric acid permease UacT-like NDN11_06850 IPR006042 Xanthine/uracil permease NDN11_06850 IPR006043 Xanthine/uracil/vitamin C permease NDN11_06860 IPR002938 FAD-binding domain NDN11_06860 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_06865 IPR011711 GntR, C-terminal NDN11_06865 IPR036390 Winged helix DNA-binding domain superfamily NDN11_06865 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_06865 IPR000524 Transcription regulator HTH, GntR NDN11_06865 IPR008920 Transcription regulator FadR/GntR, C-terminal NDN11_06870 IPR005164 Allantoicase NDN11_06870 IPR015908 Allantoicase domain NDN11_06870 IPR008979 Galactose-binding-like domain superfamily NDN11_06875 IPR011051 RmlC-like cupin domain superfamily NDN11_06875 IPR007247 Ureidoglycolate lyase NDN11_06875 IPR023525 Ureidoglycolate lyase, bacterial NDN11_06875 IPR024060 Ureidoglycolate lyase domain superfamily NDN11_06885 IPR027939 NMT1/THI5 family NDN11_06885 IPR015168 SsuA/THI5-like NDN11_06890 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB NDN11_06890 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_06890 IPR017871 ABC transporter, conserved site NDN11_06890 IPR003593 AAA+ ATPase domain NDN11_06890 IPR003439 ABC transporter-like NDN11_06895 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_06895 IPR035906 MetI-like superfamily NDN11_06900 IPR006680 Amidohydrolase-related NDN11_06900 IPR011059 Metal-dependent hydrolase, composite domain superfamily NDN11_06900 IPR032466 Metal-dependent hydrolase NDN11_06915 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal NDN11_06915 IPR024072 Dihydrofolate reductase-like domain superfamily NDN11_06925 IPR036390 Winged helix DNA-binding domain superfamily NDN11_06925 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_06925 IPR005119 LysR, substrate-binding NDN11_06925 IPR000847 Transcription regulator HTH, LysR NDN11_06930 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NDN11_06930 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NDN11_06930 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site NDN11_06935 IPR036390 Winged helix DNA-binding domain superfamily NDN11_06935 IPR011663 UbiC transcription regulator-associated NDN11_06935 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_06935 IPR010248 Histidine utilization repressor NDN11_06935 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily NDN11_06935 IPR000524 Transcription regulator HTH, GntR NDN11_06940 IPR010282 Uncharacterised protein family HutD/Ves NDN11_06940 IPR014710 RmlC-like jelly roll fold NDN11_06940 IPR011051 RmlC-like cupin domain superfamily NDN11_06945 IPR036190 Urocanase superfamily NDN11_06945 IPR035085 Urocanase, Rossmann-like domain NDN11_06945 IPR035400 Urocanase, N-terminal domain NDN11_06945 IPR023636 Urocanase conserved site NDN11_06945 IPR023637 Urocanase NDN11_06945 IPR035401 Urocanase, C-terminal domain NDN11_06945 IPR038364 Urocanase, central domain superfamily NDN11_06950 IPR001106 Aromatic amino acid lyase NDN11_06950 IPR008948 L-Aspartase-like NDN11_06950 IPR022313 Phenylalanine/histidine ammonia-lyases, active site NDN11_06950 IPR024083 Fumarase/histidase, N-terminal NDN11_06950 IPR005921 Histidine ammonia-lyase NDN11_06955 IPR004840 Amino acid permease, conserved site NDN11_06955 IPR004841 Amino acid permease/ SLC12A domain NDN11_06960 IPR006680 Amidohydrolase-related NDN11_06960 IPR032466 Metal-dependent hydrolase NDN11_06960 IPR005920 Imidazolonepropionase NDN11_06960 IPR011059 Metal-dependent hydrolase, composite domain superfamily NDN11_06965 IPR023696 Ureohydrolase domain superfamily NDN11_06965 IPR006035 Ureohydrolase NDN11_06965 IPR005923 Formiminoglutamase NDN11_06970 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase NDN11_06970 IPR033524 Leu/Phe/Val dehydrogenases active site NDN11_06970 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal NDN11_06970 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain NDN11_06970 IPR014362 Glutamate dehydrogenase NDN11_06970 IPR036291 NAD(P)-binding domain superfamily NDN11_06970 IPR033922 NAD(P) binding domain of glutamate dehydrogenase NDN11_06975 IPR036291 NAD(P)-binding domain superfamily NDN11_06975 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_06975 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_06985 IPR018060 DNA binding HTH domain, AraC-type NDN11_06985 IPR020449 Transcription regulator HTH, AraC- type NDN11_06985 IPR009057 Homeobox-like domain superfamily NDN11_06985 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal NDN11_06995 IPR036390 Winged helix DNA-binding domain superfamily NDN11_06995 IPR000524 Transcription regulator HTH, GntR NDN11_06995 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_06995 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_06995 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_06995 IPR004839 Aminotransferase, class I/classII NDN11_06995 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_07000 IPR003317 Cytochrome ubiquinol oxidase subunit 2 NDN11_07005 IPR002585 Cytochrome ubiquinol oxidase subunit 1 NDN11_07020 IPR009010 Aspartate decarboxylase-like domain superfamily NDN11_07020 IPR006656 Molybdopterin oxidoreductase NDN11_07020 IPR037951 YdeP-like, MopB domain NDN11_07020 IPR010046 Oxidoreductase alpha (molybdopterin) subunit NDN11_07020 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain NDN11_07025 IPR016193 Cytidine deaminase-like NDN11_07025 IPR003786 Sulfur carrier protein FdhD NDN11_07030 IPR006314 Dyp-type peroxidase NDN11_07030 IPR011008 Dimeric alpha-beta barrel NDN11_07040 IPR010131 RND efflux system, outer membrane lipoprotein, NodT NDN11_07040 IPR003423 Outer membrane efflux protein NDN11_07045 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 NDN11_07045 IPR001036 Acriflavin resistance protein NDN11_07045 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NDN11_07050 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NDN11_07050 IPR006143 RND efflux pump, membrane fusion protein NDN11_07055 IPR011006 CheY-like superfamily NDN11_07055 IPR039420 Transcriptional regulatory protein WalR-like NDN11_07055 IPR001789 Signal transduction response regulator, receiver domain NDN11_07055 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_07055 IPR001867 OmpR/PhoB-type DNA-binding domain NDN11_07065 IPR005467 Histidine kinase domain NDN11_07065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_07065 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_07065 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_07065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_07065 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_07065 IPR003660 HAMP domain NDN11_07065 IPR006290 Heavy metal sensor kinase NDN11_07070 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A NDN11_07070 IPR036661 Luciferase-like domain superfamily NDN11_07070 IPR011251 Luciferase-like domain NDN11_07075 IPR036812 NADP-dependent oxidoreductase domain superfamily NDN11_07075 IPR020471 Aldo/keto reductase NDN11_07075 IPR023210 NADP-dependent oxidoreductase domain NDN11_07085 IPR011852 TRAP transporter solute receptor, TAXI family NDN11_07095 IPR035906 MetI-like superfamily NDN11_07095 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_07110 IPR003593 AAA+ ATPase domain NDN11_07110 IPR003439 ABC transporter-like NDN11_07110 IPR017871 ABC transporter, conserved site NDN11_07110 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_07115 IPR035906 MetI-like superfamily NDN11_07125 IPR003593 AAA+ ATPase domain NDN11_07125 IPR009057 Homeobox-like domain superfamily NDN11_07125 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07125 IPR002078 RNA polymerase sigma factor 54 interaction domain NDN11_07125 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NDN11_07125 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NDN11_07125 IPR025944 Sigma-54 interaction domain, conserved site NDN11_07125 IPR029995 Transcriptional activator SfnR/FlbD NDN11_07130 IPR008995 Molybdate/tungstate binding, C-terminal NDN11_07130 IPR004606 Molybdenum-pterin binding NDN11_07130 IPR005116 Transport-associated OB, type 1 NDN11_07135 IPR003439 ABC transporter-like NDN11_07135 IPR003593 AAA+ ATPase domain NDN11_07135 IPR017871 ABC transporter, conserved site NDN11_07135 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07135 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB NDN11_07145 IPR009057 Homeobox-like domain superfamily NDN11_07145 IPR001647 DNA-binding HTH domain, TetR-type NDN11_07145 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal NDN11_07145 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NDN11_07145 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NDN11_07160 IPR036291 NAD(P)-binding domain superfamily NDN11_07160 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_07160 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_07165 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_07165 IPR020946 Flavin monooxygenase-like NDN11_07170 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp NDN11_07170 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP NDN11_07170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_07170 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative NDN11_07175 IPR001915 Peptidase M48 NDN11_07180 IPR036390 Winged helix DNA-binding domain superfamily NDN11_07180 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_07180 IPR018490 Cyclic nucleotide-binding-like NDN11_07180 IPR018488 Cyclic nucleotide-binding, conserved site NDN11_07180 IPR000595 Cyclic nucleotide-binding domain NDN11_07180 IPR012318 Crp-type HTH domain NDN11_07180 IPR014710 RmlC-like jelly roll fold NDN11_07180 IPR018335 Transcription regulator HTH, Crp-type, conserved site NDN11_07185 IPR036102 OsmC/Ohr superfamily NDN11_07185 IPR003718 OsmC/Ohr family NDN11_07185 IPR015946 K homology domain-like, alpha/beta NDN11_07195 IPR041546 ClpA/ClpB, AAA lid domain NDN11_07195 IPR003959 ATPase, AAA-type, core NDN11_07195 IPR017730 Chaperonin ClpB NDN11_07195 IPR028299 ClpA/B, conserved site 2 NDN11_07195 IPR019489 Clp ATPase, C-terminal NDN11_07195 IPR003593 AAA+ ATPase domain NDN11_07195 IPR004176 Clp, N-terminal NDN11_07195 IPR001270 ClpA/B family NDN11_07195 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07195 IPR036628 Clp, N-terminal domain superfamily NDN11_07195 IPR018368 ClpA/B, conserved site 1 NDN11_07205 IPR017244 Ribosomal RNA large subunit methyltransferase K/L NDN11_07205 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NDN11_07205 IPR000241 Putative RNA methylase domain NDN11_07205 IPR019614 S-adenosylmethionine-dependent methyltransferase NDN11_07205 IPR004114 THUMP domain NDN11_07205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_07215 IPR002082 Aspartate carbamoyltransferase NDN11_07215 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily NDN11_07215 IPR006130 Aspartate/ornithine carbamoyltransferase NDN11_07215 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding NDN11_07215 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain NDN11_07220 IPR006680 Amidohydrolase-related NDN11_07220 IPR004722 Dihydroorotase NDN11_07220 IPR011059 Metal-dependent hydrolase, composite domain superfamily NDN11_07220 IPR032466 Metal-dependent hydrolase NDN11_07230 IPR006690 Outer membrane protein, OmpA-like, conserved site NDN11_07230 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel NDN11_07230 IPR036737 OmpA-like domain superfamily NDN11_07230 IPR006665 OmpA-like domain NDN11_07230 IPR000498 Outer membrane protein OmpA-like, transmembrane domain NDN11_07230 IPR002368 Outer membrane protein, OmpA NDN11_07230 IPR006664 Outer membrane protein, bacterial NDN11_07245 IPR037026 Vgr protein, OB-fold domain superfamily NDN11_07245 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein NDN11_07245 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset NDN11_07245 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain NDN11_07245 IPR006531 Gp5 N-terminal NDN11_07245 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal NDN11_07280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_07280 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type NDN11_07290 IPR036249 Thioredoxin-like superfamily NDN11_07290 IPR004046 Glutathione S-transferase, C-terminal NDN11_07290 IPR004045 Glutathione S-transferase, N-terminal NDN11_07290 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NDN11_07290 IPR010987 Glutathione S-transferase, C-terminal-like NDN11_07300 IPR036249 Thioredoxin-like superfamily NDN11_07300 IPR012336 Thioredoxin-like fold NDN11_07300 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site NDN11_07300 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_07300 IPR023753 FAD/NAD(P)-binding domain NDN11_07300 IPR012081 Alkyl hydroperoxide reductase subunit F NDN11_07300 IPR002109 Glutaredoxin NDN11_07320 IPR033885 Alkane/xylene monooxygenase NDN11_07320 IPR005804 Fatty acid desaturase domain NDN11_07330 IPR013766 Thioredoxin domain NDN11_07330 IPR036249 Thioredoxin-like superfamily NDN11_07330 IPR017559 Alkyl hydroperoxide reductase subunit C NDN11_07330 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant NDN11_07330 IPR019479 Peroxiredoxin, C-terminal NDN11_07330 IPR024706 Peroxiredoxin, AhpC-type NDN11_07335 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07335 IPR024590 RNA helicase HrpA, C-terminal NDN11_07335 IPR014001 Helicase superfamily 1/2, ATP-binding domain NDN11_07335 IPR001650 Helicase, C-terminal NDN11_07335 IPR011709 Domain of unknown function DUF1605 NDN11_07335 IPR011545 DEAD/DEAH box helicase domain NDN11_07335 IPR003593 AAA+ ATPase domain NDN11_07335 IPR007502 Helicase-associated domain NDN11_07335 IPR010222 RNA helicase HrpA NDN11_07340 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NDN11_07340 IPR016039 Thiolase-like NDN11_07340 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 NDN11_07340 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal NDN11_07350 IPR007197 Radical SAM NDN11_07350 IPR003698 Lipoyl synthase NDN11_07350 IPR006638 Elp3/MiaB/NifB NDN11_07350 IPR013785 Aldolase-type TIM barrel NDN11_07355 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NDN11_07355 IPR022962 Soluble pyridine nucleotide transhydrogenase NDN11_07355 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_07355 IPR023753 FAD/NAD(P)-binding domain NDN11_07355 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily NDN11_07355 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I NDN11_07370 IPR012997 Rare lipoprotein A NDN11_07370 IPR009009 RlpA-like protein, double-psi beta-barrel domain NDN11_07370 IPR034718 Endolytic peptidoglycan transglycosylase RlpA NDN11_07370 IPR036908 RlpA-like domain superfamily NDN11_07370 IPR007730 Sporulation-like domain NDN11_07375 IPR031304 Transglycosylase SLT domain 2 NDN11_07375 IPR011757 Lytic transglycosylase MltB NDN11_07375 IPR023346 Lysozyme-like domain superfamily NDN11_07380 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB NDN11_07380 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA NDN11_07380 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site NDN11_07390 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal NDN11_07390 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 NDN11_07390 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF NDN11_07395 IPR013525 ABC-2 type transporter NDN11_07395 IPR000412 ABC-2 transporter NDN11_07400 IPR003439 ABC transporter-like NDN11_07400 IPR003593 AAA+ ATPase domain NDN11_07400 IPR017871 ABC transporter, conserved site NDN11_07400 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07430 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_07430 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_07430 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_07430 IPR001085 Serine hydroxymethyltransferase NDN11_07430 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site NDN11_07430 IPR039429 Serine hydroxymethyltransferase-like domain NDN11_07445 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NDN11_07445 IPR011054 Rudiment single hybrid motif NDN11_07445 IPR016185 Pre-ATP-grasp domain superfamily NDN11_07445 IPR011764 Biotin carboxylation domain NDN11_07445 IPR005481 Biotin carboxylase-like, N-terminal domain NDN11_07445 IPR005482 Biotin carboxylase, C-terminal NDN11_07445 IPR011761 ATP-grasp fold NDN11_07450 IPR022988 Nickel-responsive transcriptional regulator NikR NDN11_07450 IPR014864 Transcription factor, NikR, nickel binding C-terminal NDN11_07450 IPR010985 Ribbon-helix-helix NDN11_07450 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal NDN11_07450 IPR013321 Arc-type ribbon-helix-helix NDN11_07450 IPR002145 Ribbon-helix-helix protein, CopG NDN11_07455 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NDN11_07455 IPR018313 Solute-binding protein family 3, conserved site NDN11_07455 IPR001320 Ionotropic glutamate receptor NDN11_07470 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07470 IPR003439 ABC transporter-like NDN11_07470 IPR017871 ABC transporter, conserved site NDN11_07470 IPR003593 AAA+ ATPase domain NDN11_07480 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NDN11_07480 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NDN11_07485 IPR032525 Peptidase family U32, C-terminal NDN11_07485 IPR001539 Peptidase U32 NDN11_07495 IPR008024 YiaAB two helix NDN11_07495 IPR038972 Inner membrane protein YiaA-like NDN11_07500 IPR004373 Peptide chain release factor 1 NDN11_07500 IPR000352 Peptide chain release factor class I NDN11_07500 IPR005139 Peptide chain release factor NDN11_07505 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NDN11_07505 IPR004556 Methyltransferase HemK-like NDN11_07505 IPR025714 Methyltransferase domain NDN11_07505 IPR040758 Release factor glutamine methyltransferase, N-terminal domain NDN11_07505 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific NDN11_07505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_07520 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_07520 IPR036291 NAD(P)-binding domain superfamily NDN11_07520 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_07530 IPR012349 FMN-binding split barrel NDN11_07530 IPR002563 Flavin reductase like domain NDN11_07535 IPR018060 DNA binding HTH domain, AraC-type NDN11_07535 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal NDN11_07535 IPR020449 Transcription regulator HTH, AraC- type NDN11_07535 IPR009057 Homeobox-like domain superfamily NDN11_07540 IPR029058 Alpha/Beta hydrolase fold NDN11_07540 IPR000073 Alpha/beta hydrolase fold-1 NDN11_07545 IPR004961 Lipase chaperone NDN11_07555 IPR035985 Ubiquitin-activating enzyme NDN11_07555 IPR000594 THIF-type NAD/FAD binding fold NDN11_07555 IPR012730 Molybdopterin synthase sulfurylase MoeB NDN11_07560 IPR011009 Protein kinase-like domain superfamily NDN11_07560 IPR000719 Protein kinase domain NDN11_07560 IPR004147 UbiB domain NDN11_07565 IPR006157 Dihydroneopterin aldolase/epimerase domain NDN11_07565 IPR006156 Dihydroneopterin aldolase NDN11_07585 IPR011566 Ubiquinone biosynthesis protein Coq7 NDN11_07585 IPR009078 Ferritin-like superfamily NDN11_07590 IPR023727 Lysophospholipid transporter LplT NDN11_07590 IPR011701 Major facilitator superfamily NDN11_07590 IPR036259 MFS transporter superfamily NDN11_07595 IPR034746 POTRA domain NDN11_07595 IPR010827 POTRA domain, BamA/TamA-like NDN11_07595 IPR039910 Surface antigen D15-like NDN11_07595 IPR000184 Bacterial surface antigen (D15) NDN11_07595 IPR035243 TamA, POTRA domain 1 NDN11_07620 IPR004406 Aconitase B NDN11_07620 IPR015933 Aconitase B, HEAT-like domain NDN11_07620 IPR036288 Aconitase B, HEAT-like domain superfamily NDN11_07620 IPR015929 Aconitase B, swivel NDN11_07620 IPR015932 Aconitase, domain 2 NDN11_07620 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NDN11_07620 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain NDN11_07620 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 NDN11_07620 IPR036008 Aconitase, iron-sulfur domain NDN11_07620 IPR018136 Aconitase family, 4Fe-4S cluster binding site NDN11_07630 IPR030676 Citrate carrier CitT-related NDN11_07630 IPR001898 Solute carrier family 13 NDN11_07635 IPR018490 Cyclic nucleotide-binding-like NDN11_07635 IPR000595 Cyclic nucleotide-binding domain NDN11_07635 IPR005821 Ion transport domain NDN11_07635 IPR014710 RmlC-like jelly roll fold NDN11_07635 IPR018488 Cyclic nucleotide-binding, conserved site NDN11_07635 IPR028325 Voltage-gated potassium channel NDN11_07640 IPR037294 ABC transporter, BtuC-like NDN11_07640 IPR000522 ABC transporter, permease protein, BtuC-like NDN11_07645 IPR000522 ABC transporter, permease protein, BtuC-like NDN11_07645 IPR037294 ABC transporter, BtuC-like NDN11_07650 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07650 IPR017871 ABC transporter, conserved site NDN11_07650 IPR003439 ABC transporter-like NDN11_07650 IPR003593 AAA+ ATPase domain NDN11_07655 IPR033870 FatB domain NDN11_07655 IPR002491 ABC transporter periplasmic binding domain NDN11_07660 IPR014509 Uncharacterised conserved protein UCP020606 NDN11_07665 IPR020846 Major facilitator superfamily domain NDN11_07665 IPR011701 Major facilitator superfamily NDN11_07665 IPR036259 MFS transporter superfamily NDN11_07675 IPR003828 Epoxyqueuosine reductase QueH NDN11_07680 IPR005119 LysR, substrate-binding NDN11_07680 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain NDN11_07680 IPR000847 Transcription regulator HTH, LysR NDN11_07680 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_07680 IPR036390 Winged helix DNA-binding domain superfamily NDN11_07685 IPR007382 Uncharacterised protein family UPF0756, transmembrame NDN11_07700 IPR001433 Oxidoreductase FAD/NAD(P)-binding NDN11_07700 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NDN11_07700 IPR017927 FAD-binding domain, ferredoxin reductase-type NDN11_07700 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase NDN11_07700 IPR033892 Ferredoxin--NADP reductase, bacteria NDN11_07700 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NDN11_07700 IPR017938 Riboflavin synthase-like beta-barrel NDN11_07705 IPR036414 YaeB, N-terminal domain superfamily NDN11_07705 IPR036413 YaeB-like superfamily NDN11_07705 IPR040372 YaeB-like NDN11_07705 IPR023368 Uncharacterised protein family UPF0066, conserved site NDN11_07705 IPR041369 TrmO, C-terminal NDN11_07705 IPR023370 TrmO-like, N-terminal domain NDN11_07710 IPR003593 AAA+ ATPase domain NDN11_07710 IPR013374 ATPase, type IV, pilus assembly, PilB NDN11_07710 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07710 IPR001482 Type II/IV secretion system protein NDN11_07710 IPR037257 General secretory system II, protein E, N-terminal superfamily NDN11_07710 IPR007831 General secretory system II, protein E, N-terminal NDN11_07710 IPR042181 Type II secretion system, protein E, N-terminal NDN11_07720 IPR011006 CheY-like superfamily NDN11_07720 IPR001867 OmpR/PhoB-type DNA-binding domain NDN11_07720 IPR016032 Signal transduction response regulator, C-terminal effector NDN11_07720 IPR001789 Signal transduction response regulator, receiver domain NDN11_07720 IPR039420 Transcriptional regulatory protein WalR-like NDN11_07720 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_07725 IPR005467 Histidine kinase domain NDN11_07725 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_07725 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_07725 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_07725 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_07725 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_07725 IPR013727 Two-component sensor kinase, N-terminal NDN11_07725 IPR003660 HAMP domain NDN11_07735 IPR003561 Mutator MutT NDN11_07735 IPR020476 NUDIX hydrolase NDN11_07735 IPR015797 NUDIX hydrolase-like domain superfamily NDN11_07735 IPR020084 NUDIX hydrolase, conserved site NDN11_07735 IPR000086 NUDIX hydrolase domain NDN11_07745 IPR036950 Penicillin binding protein transglycosylase domain NDN11_07745 IPR001460 Penicillin-binding protein, transpeptidase NDN11_07745 IPR028166 Bifunctional transglycosylase second domain NDN11_07745 IPR023346 Lysozyme-like domain superfamily NDN11_07745 IPR011813 Penicillin-binding protein 1B NDN11_07745 IPR012338 Beta-lactamase/transpeptidase-like NDN11_07745 IPR001264 Glycosyl transferase, family 51 NDN11_07750 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal NDN11_07750 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily NDN11_07750 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal NDN11_07750 IPR002504 NAD kinase NDN11_07755 IPR009749 Protein of unknown function DUF1315 NDN11_07760 IPR006531 Gp5 N-terminal NDN11_07760 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain NDN11_07760 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein NDN11_07760 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset NDN11_07760 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain NDN11_07760 IPR037026 Vgr protein, OB-fold domain superfamily NDN11_07760 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal NDN11_07760 IPR037026 Vgr protein, OB-fold domain superfamily NDN11_07760 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein NDN11_07760 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal NDN11_07760 IPR006531 Gp5 N-terminal NDN11_07760 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset NDN11_07775 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily NDN11_07775 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily NDN11_07775 IPR017459 Glycosyl transferase family 3, N-terminal domain NDN11_07775 IPR000312 Glycosyl transferase, family 3 NDN11_07775 IPR005940 Anthranilate phosphoribosyl transferase NDN11_07780 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NDN11_07780 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_07780 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_07780 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_07780 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_07780 IPR006089 Acyl-CoA dehydrogenase, conserved site NDN11_07780 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_07795 IPR001086 Prephenate dehydratase NDN11_07795 IPR018528 Prephenate dehydratase, conserved site NDN11_07795 IPR036979 Chorismate mutase domain superfamily NDN11_07795 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain NDN11_07795 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase NDN11_07795 IPR002701 Chorismate mutase II, prokaryotic-type NDN11_07795 IPR036263 Chorismate mutase type II superfamily NDN11_07795 IPR002912 ACT domain NDN11_07800 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site NDN11_07800 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase NDN11_07800 IPR036968 Enolpyruvate transferase domain superfamily NDN11_07800 IPR001986 Enolpyruvate transferase domain NDN11_07800 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta NDN11_07810 IPR001160 Peptidase M20C, Xaa-His dipeptidase NDN11_07810 IPR002933 Peptidase M20 NDN11_07810 IPR011650 Peptidase M20, dimerisation domain NDN11_07815 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily NDN11_07815 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site NDN11_07815 IPR017770 RNA 3'-terminal phosphate cyclase type 1 NDN11_07815 IPR000228 RNA 3'-terminal phosphate cyclase NDN11_07815 IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily NDN11_07815 IPR023797 RNA 3'-terminal phosphate cyclase domain NDN11_07815 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta NDN11_07815 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain NDN11_07830 IPR001233 tRNA-splicing ligase, RtcB NDN11_07830 IPR036025 tRNA-splicing ligase RtcB-like superfamily NDN11_07835 IPR001279 Metallo-beta-lactamase NDN11_07835 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NDN11_07835 IPR013471 Ribonuclease Z/BN NDN11_07840 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NDN11_07840 IPR002078 RNA polymerase sigma factor 54 interaction domain NDN11_07840 IPR017183 Sigma54-dependent transcriptional activator, RtcR NDN11_07840 IPR009715 Regulator of RNA terminal phosphate cyclase NDN11_07840 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07840 IPR003593 AAA+ ATPase domain NDN11_07855 IPR005583 Peroxide stress protein YaaA NDN11_07875 IPR008867 Thiazole synthase NDN11_07875 IPR033983 Thiazole synthase ThiG NDN11_07875 IPR013785 Aldolase-type TIM barrel NDN11_07885 IPR006696 Protein of unknown function DUF423 NDN11_07890 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria NDN11_07890 IPR013324 RNA polymerase sigma factor, region 3/4-like NDN11_07890 IPR013325 RNA polymerase sigma factor, region 2 NDN11_07890 IPR007630 RNA polymerase sigma-70 region 4 NDN11_07890 IPR007627 RNA polymerase sigma-70 region 2 NDN11_07890 IPR009042 RNA polymerase sigma-70 region 1.2 NDN11_07890 IPR000943 RNA polymerase sigma-70 NDN11_07890 IPR014284 RNA polymerase sigma-70 like domain NDN11_07900 IPR011129 Cold shock domain NDN11_07900 IPR002059 Cold-shock protein, DNA-binding NDN11_07900 IPR012340 Nucleic acid-binding, OB-fold NDN11_07900 IPR012156 Cold shock, CspA NDN11_07900 IPR019844 Cold-shock (CSD) domain NDN11_07905 IPR001650 Helicase, C-terminal NDN11_07905 IPR014014 RNA helicase, DEAD-box type, Q motif NDN11_07905 IPR023554 ATP-dependent RNA helicase RhlB type NDN11_07905 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NDN11_07905 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07905 IPR014001 Helicase superfamily 1/2, ATP-binding domain NDN11_07905 IPR011545 DEAD/DEAH box helicase domain NDN11_07910 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype NDN11_07910 IPR000771 Fructose-bisphosphate aldolase, class-II NDN11_07910 IPR013785 Aldolase-type TIM barrel NDN11_07915 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type NDN11_07915 IPR027304 Trigger factor/SurA domain superfamily NDN11_07915 IPR015391 SurA N-terminal NDN11_07915 IPR023034 Peptidyl-prolyl isomerase SurA NDN11_07920 IPR005653 Organic solvent tolerance-like, N-terminal NDN11_07920 IPR007543 LptD, C-terminal NDN11_07920 IPR020889 LPS-assembly protein LptD NDN11_07925 IPR002575 Aminoglycoside phosphotransferase NDN11_07925 IPR011009 Protein kinase-like domain superfamily NDN11_07930 IPR005835 Nucleotidyl transferase domain NDN11_07930 IPR029044 Nucleotide-diphospho-sugar transferases NDN11_07935 IPR003682 rRNA small subunit methyltransferase G NDN11_07935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_07940 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07940 IPR025669 AAA domain NDN11_07945 IPR003115 ParB/Sulfiredoxin NDN11_07945 IPR036086 ParB/Sulfiredoxin superfamily NDN11_07945 IPR041468 ParB/Spo0J, HTH domain NDN11_07945 IPR004437 ParB/RepB/Spo0J partition protein NDN11_07950 IPR002898 MotA/TolQ/ExbB proton channel NDN11_07960 IPR039421 Type I protein exporter NDN11_07960 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07960 IPR011917 ABC transporter, lipid A export, MsbA NDN11_07960 IPR017871 ABC transporter, conserved site NDN11_07960 IPR003439 ABC transporter-like NDN11_07960 IPR036640 ABC transporter type 1, transmembrane domain superfamily NDN11_07960 IPR003593 AAA+ ATPase domain NDN11_07960 IPR011527 ABC transporter type 1, transmembrane domain NDN11_07965 IPR003758 Tetraacyldisaccharide 4'-kinase NDN11_07965 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07970 IPR003329 Acylneuraminate cytidylyltransferase NDN11_07970 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase NDN11_07970 IPR029044 Nucleotide-diphospho-sugar transferases NDN11_07975 IPR004622 DNA polymerase III, delta prime subunit NDN11_07975 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_07975 IPR015199 DNA polymerase III, delta subunit, C-terminal NDN11_07995 IPR018228 Deoxyribonuclease, TatD-related, conserved site NDN11_07995 IPR015991 Uncharacterised hydrolase TatD-type NDN11_07995 IPR032466 Metal-dependent hydrolase NDN11_07995 IPR001130 TatD family NDN11_08005 IPR012902 Prokaryotic N-terminal methylation site NDN11_08005 IPR002416 Type II secretion system protein H NDN11_08015 IPR012902 Prokaryotic N-terminal methylation site NDN11_08015 IPR010055 Type II secretion system protein J NDN11_08020 IPR005628 General secretion pathway protein K NDN11_08020 IPR038072 GspK, central domain superfamily NDN11_08030 IPR002043 Uracil-DNA glycosylase family 1 NDN11_08030 IPR018085 Uracil-DNA glycosylase, active site NDN11_08030 IPR005122 Uracil-DNA glycosylase-like NDN11_08030 IPR036895 Uracil-DNA glycosylase-like domain superfamily NDN11_08040 IPR028883 tRNA-specific adenosine deaminase NDN11_08040 IPR016193 Cytidine deaminase-like NDN11_08040 IPR016192 APOBEC/CMP deaminase, zinc-binding NDN11_08040 IPR002125 Cytidine and deoxycytidylate deaminase domain NDN11_08050 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_08050 IPR003136 Cytidylate kinase NDN11_08050 IPR011994 Cytidylate kinase domain NDN11_08055 IPR022967 RNA-binding domain, S1 NDN11_08055 IPR000110 Ribosomal protein S1 NDN11_08055 IPR003029 S1 domain NDN11_08055 IPR012340 Nucleic acid-binding, OB-fold NDN11_08060 IPR005685 Integration host factor, beta subunit NDN11_08060 IPR000119 Histone-like DNA-binding protein NDN11_08060 IPR020816 Histone-like DNA-binding protein, conserved site NDN11_08060 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily NDN11_08085 IPR001754 Orotidine 5'-phosphate decarboxylase domain NDN11_08085 IPR018089 Orotidine 5'-phosphate decarboxylase, active site NDN11_08085 IPR011060 Ribulose-phosphate binding barrel NDN11_08085 IPR013785 Aldolase-type TIM barrel NDN11_08085 IPR014732 Orotidine 5'-phosphate decarboxylase NDN11_08090 IPR005642 Lysine exporter LysO NDN11_08095 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NDN11_08095 IPR009057 Homeobox-like domain superfamily NDN11_08095 IPR001647 DNA-binding HTH domain, TetR-type NDN11_08100 IPR004734 Multidrug resistance protein NDN11_08100 IPR036259 MFS transporter superfamily NDN11_08100 IPR020846 Major facilitator superfamily domain NDN11_08100 IPR004812 Drug resistance transporter Bcr/CmlA subfamily NDN11_08100 IPR011701 Major facilitator superfamily NDN11_08105 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_08105 IPR020946 Flavin monooxygenase-like NDN11_08115 IPR005654 ATPase, AFG1-like NDN11_08115 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_08115 IPR030870 Cell division protein ZapE NDN11_08120 IPR006253 Malate synthase G NDN11_08120 IPR023310 Malate synthase G, beta sub-domain NDN11_08120 IPR011076 Malate synthase-like superfamily NDN11_08120 IPR001465 Malate synthase NDN11_08155 IPR004685 Branched-chain amino acid transport system II carrier protein NDN11_08160 IPR036005 Creatinase/aminopeptidase-like NDN11_08160 IPR001714 Peptidase M24, methionine aminopeptidase NDN11_08160 IPR000994 Peptidase M24 NDN11_08160 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 NDN11_08165 IPR036390 Winged helix DNA-binding domain superfamily NDN11_08165 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_08165 IPR000847 Transcription regulator HTH, LysR NDN11_08165 IPR005119 LysR, substrate-binding NDN11_08170 IPR012676 TGS-like NDN11_08170 IPR004095 TGS NDN11_08170 IPR007685 RelA/SpoT NDN11_08170 IPR004811 RelA/SpoT family NDN11_08170 IPR003607 HD/PDEase domain NDN11_08170 IPR012675 Beta-grasp domain superfamily NDN11_08170 IPR002912 ACT domain NDN11_08170 IPR033655 RelA, TGS domain NDN11_08180 IPR014434 Monothiol glutaredoxin NDN11_08180 IPR002109 Glutaredoxin NDN11_08180 IPR033658 Glutaredoxin, PICOT-like NDN11_08180 IPR004480 Monothiol glutaredoxin-related NDN11_08180 IPR036249 Thioredoxin-like superfamily NDN11_08185 IPR004636 Acetylornithine/Succinylornithine transaminase family NDN11_08185 IPR005814 Aminotransferase class-III NDN11_08185 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_08185 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_08185 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_08190 IPR000644 CBS domain NDN11_08215 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain NDN11_08215 IPR036225 SRP/SRP receptor, N-terminal NDN11_08215 IPR004390 Signal-recognition particle receptor FtsY NDN11_08215 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily NDN11_08215 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_08215 IPR003593 AAA+ ATPase domain NDN11_08215 IPR013822 Signal recognition particle SRP54, helical bundle NDN11_08250 IPR011662 Secretin/TonB, short N-terminal domain NDN11_08250 IPR039423 TonB-dependent receptor-like NDN11_08250 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_08250 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_08250 IPR010105 TonB-dependent siderophore receptor NDN11_08250 IPR012910 TonB-dependent receptor, plug domain NDN11_08250 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_08250 IPR010917 TonB-dependent receptor, conserved site NDN11_08260 IPR012994 Membrane bound YbgT-like NDN11_08260 IPR011724 Cyd operon protein YbgT NDN11_08265 IPR003317 Cytochrome ubiquinol oxidase subunit 2 NDN11_08270 IPR002585 Cytochrome ubiquinol oxidase subunit 1 NDN11_08290 IPR011611 Carbohydrate kinase PfkB NDN11_08290 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site NDN11_08290 IPR029056 Ribokinase-like NDN11_08300 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like NDN11_08300 IPR011765 Peptidase M16, N-terminal NDN11_08300 IPR007863 Peptidase M16, C-terminal NDN11_08300 IPR013578 Peptidase M16C associated NDN11_08305 IPR003187 Phospholipase A1 NDN11_08305 IPR036541 Phospholipase A1 superfamily NDN11_08315 IPR003445 Cation transporter NDN11_08315 IPR004772 TrkH potassium transport family NDN11_08320 IPR003148 Regulator of K+ conductance, N-terminal NDN11_08320 IPR036291 NAD(P)-binding domain superfamily NDN11_08320 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily NDN11_08320 IPR006037 Regulator of K+ conductance, C-terminal NDN11_08325 IPR001926 Pyridoxal-phosphate dependent enzyme NDN11_08325 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site NDN11_08325 IPR001721 Threonine dehydratase, ACT-like domain NDN11_08325 IPR038110 Threonine dehydratase, ACT-like domain superfamily NDN11_08325 IPR005787 Threonine dehydratase, biosynthetic NDN11_08325 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NDN11_08330 IPR037171 NagB/RpiA transferase-like NDN11_08330 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup NDN11_08330 IPR004788 Ribose 5-phosphate isomerase, type A NDN11_08345 IPR017850 Alkaline-phosphatase-like, core domain superfamily NDN11_08345 IPR018299 Alkaline phosphatase, active site NDN11_08345 IPR001952 Alkaline phosphatase NDN11_08355 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site NDN11_08355 IPR012280 Semialdehyde dehydrogenase, dimerisation domain NDN11_08355 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 NDN11_08355 IPR036291 NAD(P)-binding domain superfamily NDN11_08355 IPR000534 Semialdehyde dehydrogenase, NAD-binding NDN11_08365 IPR022935 ATP-dependent Clp protease adaptor protein ClpS NDN11_08365 IPR003769 Adaptor protein ClpS, core NDN11_08365 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NDN11_08370 IPR036628 Clp, N-terminal domain superfamily NDN11_08370 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_08370 IPR041546 ClpA/ClpB, AAA lid domain NDN11_08370 IPR003593 AAA+ ATPase domain NDN11_08370 IPR003959 ATPase, AAA-type, core NDN11_08370 IPR019489 Clp ATPase, C-terminal NDN11_08370 IPR028299 ClpA/B, conserved site 2 NDN11_08370 IPR004176 Clp, N-terminal NDN11_08370 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA NDN11_08370 IPR001270 ClpA/B family NDN11_08370 IPR018368 ClpA/B, conserved site 1 NDN11_08375 IPR003844 Uncharacterised protein family UPF0060 NDN11_08380 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_08380 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily NDN11_08380 IPR017871 ABC transporter, conserved site NDN11_08380 IPR032781 ABC-transporter extension domain NDN11_08380 IPR003439 ABC transporter-like NDN11_08380 IPR003593 AAA+ ATPase domain NDN11_08380 IPR032524 ABC transporter Uup, C-terminal NDN11_08385 IPR013785 Aldolase-type TIM barrel NDN11_08385 IPR006218 DAHP synthetase I/KDSA NDN11_08385 IPR006219 DHAP synthase, class 1 NDN11_08390 IPR029058 Alpha/Beta hydrolase fold NDN11_08390 IPR000073 Alpha/beta hydrolase fold-1 NDN11_08400 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NDN11_08400 IPR013785 Aldolase-type TIM barrel NDN11_08400 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_08400 IPR023753 FAD/NAD(P)-binding domain NDN11_08425 IPR017456 CTP synthase, N-terminal NDN11_08425 IPR017926 Glutamine amidotransferase NDN11_08425 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_08425 IPR004468 CTP synthase NDN11_08425 IPR033828 CTP synthase GATase domain NDN11_08425 IPR029062 Class I glutamine amidotransferase-like NDN11_08430 IPR006269 3-deoxy-8-phosphooctulonate synthase NDN11_08430 IPR013785 Aldolase-type TIM barrel NDN11_08430 IPR006218 DAHP synthetase I/KDSA NDN11_08435 IPR020810 Enolase, C-terminal TIM barrel domain NDN11_08435 IPR020811 Enolase, N-terminal NDN11_08435 IPR029017 Enolase-like, N-terminal NDN11_08435 IPR020809 Enolase, conserved site NDN11_08435 IPR000941 Enolase NDN11_08435 IPR036849 Enolase-like, C-terminal domain superfamily NDN11_08440 IPR023081 Cell division protein FtsB NDN11_08440 IPR007060 Septum formation initiator FtsL/DivIC NDN11_08445 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NDN11_08445 IPR034683 Cytidylyltransferase IspD/TarI NDN11_08445 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site NDN11_08445 IPR029044 Nucleotide-diphospho-sugar transferases NDN11_08465 IPR007272 Sulphur transport domain NDN11_08475 IPR001279 Metallo-beta-lactamase NDN11_08475 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NDN11_08490 IPR019914 Pyrimidine monooxygenase RutA NDN11_08490 IPR036661 Luciferase-like domain superfamily NDN11_08490 IPR011251 Luciferase-like domain NDN11_08505 IPR009057 Homeobox-like domain superfamily NDN11_08505 IPR018060 DNA binding HTH domain, AraC-type NDN11_08505 IPR018062 HTH domain AraC-type, conserved site NDN11_08510 IPR001123 Amino acid exporter protein, LeuE-type NDN11_08510 IPR004778 Homoserine/Threonine efflux protein NDN11_08540 IPR030871 Cardiolipin synthase C NDN11_08540 IPR025202 Phospholipase D-like domain NDN11_08540 IPR001736 Phospholipase D/Transphosphatidylase NDN11_08545 IPR003735 Metal-sensitive transcriptional repressor NDN11_08545 IPR038390 Metal-sensitive transcriptional repressor superfamily NDN11_08550 IPR020843 Polyketide synthase, enoylreductase domain NDN11_08550 IPR036291 NAD(P)-binding domain superfamily NDN11_08550 IPR011032 GroES-like superfamily NDN11_08550 IPR014183 Alcohol dehydrogenase class III NDN11_08550 IPR013154 Alcohol dehydrogenase, N-terminal NDN11_08550 IPR013149 Alcohol dehydrogenase, C-terminal NDN11_08550 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site NDN11_08555 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_08555 IPR000847 Transcription regulator HTH, LysR NDN11_08555 IPR005116 Transport-associated OB, type 1 NDN11_08555 IPR036390 Winged helix DNA-binding domain superfamily NDN11_08555 IPR003725 Molybdenum-binding protein ModE, N-terminal NDN11_08555 IPR016462 Molybdate-dependent transcriptional regulator ModE NDN11_08555 IPR008995 Molybdate/tungstate binding, C-terminal NDN11_08555 IPR004606 Molybdenum-pterin binding NDN11_08560 IPR014085 Allophanate hydrolase NDN11_08560 IPR023631 Amidase signature domain NDN11_08560 IPR036928 Amidase signature (AS) superfamily NDN11_08565 IPR016185 Pre-ATP-grasp domain superfamily NDN11_08565 IPR011761 ATP-grasp fold NDN11_08565 IPR005481 Biotin carboxylase-like, N-terminal domain NDN11_08565 IPR001882 Biotin-binding site NDN11_08565 IPR011764 Biotin carboxylation domain NDN11_08565 IPR005482 Biotin carboxylase, C-terminal NDN11_08565 IPR000089 Biotin/lipoyl attachment NDN11_08565 IPR011054 Rudiment single hybrid motif NDN11_08565 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NDN11_08565 IPR011053 Single hybrid motif NDN11_08570 IPR000485 AsnC-type HTH domain NDN11_08570 IPR011711 GntR, C-terminal NDN11_08570 IPR008920 Transcription regulator FadR/GntR, C-terminal NDN11_08570 IPR000524 Transcription regulator HTH, GntR NDN11_08570 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_08570 IPR036390 Winged helix DNA-binding domain superfamily NDN11_08580 IPR009057 Homeobox-like domain superfamily NDN11_08580 IPR018060 DNA binding HTH domain, AraC-type NDN11_08580 IPR009594 Transcription regulator HTH, AraC, N-terminal NDN11_08585 IPR036291 NAD(P)-binding domain superfamily NDN11_08585 IPR011032 GroES-like superfamily NDN11_08585 IPR013149 Alcohol dehydrogenase, C-terminal NDN11_08585 IPR013154 Alcohol dehydrogenase, N-terminal NDN11_08585 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site NDN11_08590 IPR002818 DJ-1/PfpI NDN11_08590 IPR029062 Class I glutamine amidotransferase-like NDN11_08590 IPR017283 Protein/nucleic acid deglycase HchA NDN11_08595 IPR039420 Transcriptional regulatory protein WalR-like NDN11_08595 IPR001789 Signal transduction response regulator, receiver domain NDN11_08595 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response NDN11_08595 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_08595 IPR001867 OmpR/PhoB-type DNA-binding domain NDN11_08595 IPR011006 CheY-like superfamily NDN11_08600 IPR036291 NAD(P)-binding domain superfamily NDN11_08600 IPR013332 Ketopantoate reductase, N-terminal domain NDN11_08600 IPR003710 Ketopantoate reductase ApbA/PanE NDN11_08600 IPR013328 6-phosphogluconate dehydrogenase, domain 2 NDN11_08600 IPR013752 Ketopantoate reductase, C-terminal domain NDN11_08600 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_08610 IPR039562 Membrane fusion protein, biotin-lipoyl like domain NDN11_08615 IPR004638 Drug resistance transporter EmrB-like NDN11_08615 IPR011701 Major facilitator superfamily NDN11_08615 IPR020846 Major facilitator superfamily domain NDN11_08615 IPR036259 MFS transporter superfamily NDN11_08650 IPR000620 EamA domain NDN11_08655 IPR000847 Transcription regulator HTH, LysR NDN11_08655 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_08655 IPR036390 Winged helix DNA-binding domain superfamily NDN11_08655 IPR005119 LysR, substrate-binding NDN11_08660 IPR003776 YcaO-like domain NDN11_08660 IPR041080 YcaO cyclodehydratase, C-terminal NDN11_08670 IPR012675 Beta-grasp domain superfamily NDN11_08670 IPR018298 Adrenodoxin, iron-sulphur binding site NDN11_08670 IPR001055 Adrenodoxin NDN11_08670 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria NDN11_08670 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NDN11_08670 IPR036010 2Fe-2S ferredoxin-like superfamily NDN11_08680 IPR000551 MerR-type HTH domain NDN11_08680 IPR015358 Transcription regulator MerR, DNA binding NDN11_08680 IPR011789 Cu(I)-responsive transcriptional regulator NDN11_08680 IPR009061 Putative DNA-binding domain superfamily NDN11_08685 IPR001757 P-type ATPase NDN11_08685 IPR006121 Heavy metal-associated domain, HMA NDN11_08685 IPR006122 Heavy metal-associated domain, copper ion-binding NDN11_08685 IPR017969 Heavy-metal-associated, conserved site NDN11_08685 IPR036412 HAD-like superfamily NDN11_08685 IPR008250 P-type ATPase, A domain superfamily NDN11_08685 IPR023298 P-type ATPase, transmembrane domain superfamily NDN11_08685 IPR018303 P-type ATPase, phosphorylation site NDN11_08685 IPR023299 P-type ATPase, cytoplasmic domain N NDN11_08685 IPR027256 P-type ATPase, subfamily IB NDN11_08685 IPR023214 HAD superfamily NDN11_08685 IPR036163 Heavy metal-associated domain superfamily NDN11_08690 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_08690 IPR020946 Flavin monooxygenase-like NDN11_08700 IPR000792 Transcription regulator LuxR, C-terminal NDN11_08700 IPR016032 Signal transduction response regulator, C-terminal effector NDN11_08700 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_08705 IPR000120 Amidase NDN11_08705 IPR020556 Amidase, conserved site NDN11_08705 IPR023631 Amidase signature domain NDN11_08705 IPR036928 Amidase signature (AS) superfamily NDN11_08710 IPR041756 Peptidase M28, SGAP-like NDN11_08710 IPR007484 Peptidase M28 NDN11_08710 IPR013856 Peptidase M4 domain NDN11_08710 IPR027268 Peptidase M4/M1, CTD superfamily NDN11_08710 IPR001570 Peptidase M4, C-terminal NDN11_08720 IPR006290 Heavy metal sensor kinase NDN11_08720 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_08720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_08720 IPR005467 Histidine kinase domain NDN11_08720 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_08720 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_08720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_08720 IPR003660 HAMP domain NDN11_08725 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_08725 IPR039420 Transcriptional regulatory protein WalR-like NDN11_08725 IPR001789 Signal transduction response regulator, receiver domain NDN11_08725 IPR011006 CheY-like superfamily NDN11_08725 IPR001867 OmpR/PhoB-type DNA-binding domain NDN11_08725 IPR016032 Signal transduction response regulator, C-terminal effector NDN11_08725 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response NDN11_08740 IPR007801 Uncharacterised protein family UPF0276 NDN11_08740 IPR036237 Xylose isomerase-like superfamily NDN11_08750 IPR014284 RNA polymerase sigma-70 like domain NDN11_08750 IPR039425 RNA polymerase sigma-70 like NDN11_08750 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site NDN11_08750 IPR014289 RNA polymerase sigma-24-related NDN11_08750 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_08750 IPR013324 RNA polymerase sigma factor, region 3/4-like NDN11_08750 IPR013325 RNA polymerase sigma factor, region 2 NDN11_08750 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 NDN11_08750 IPR007627 RNA polymerase sigma-70 region 2 NDN11_08775 IPR003333 Mycolic acid cyclopropane synthase NDN11_08775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_08790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_08790 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_08790 IPR013727 Two-component sensor kinase, N-terminal NDN11_08790 IPR005467 Histidine kinase domain NDN11_08790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_08790 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_08790 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_08795 IPR039420 Transcriptional regulatory protein WalR-like NDN11_08795 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_08795 IPR001867 OmpR/PhoB-type DNA-binding domain NDN11_08795 IPR001789 Signal transduction response regulator, receiver domain NDN11_08795 IPR011006 CheY-like superfamily NDN11_08825 IPR036291 NAD(P)-binding domain superfamily NDN11_08825 IPR005097 Saccharopine dehydrogenase, NADP binding domain NDN11_08835 IPR029058 Alpha/Beta hydrolase fold NDN11_08835 IPR000073 Alpha/beta hydrolase fold-1 NDN11_08835 IPR000639 Epoxide hydrolase-like NDN11_08840 IPR023753 FAD/NAD(P)-binding domain NDN11_08840 IPR013785 Aldolase-type TIM barrel NDN11_08840 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NDN11_08840 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_08855 IPR037392 YfmP, Helix-Turn-Helix DNA binding domain NDN11_08855 IPR000551 MerR-type HTH domain NDN11_08855 IPR009061 Putative DNA-binding domain superfamily NDN11_08865 IPR003680 Flavodoxin-like fold NDN11_08865 IPR029039 Flavoprotein-like superfamily NDN11_08865 IPR023048 NADH-azoreductase, FMN-dependent NDN11_08870 IPR005119 LysR, substrate-binding NDN11_08870 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_08870 IPR000847 Transcription regulator HTH, LysR NDN11_08870 IPR036390 Winged helix DNA-binding domain superfamily NDN11_08875 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site NDN11_08875 IPR039425 RNA polymerase sigma-70 like NDN11_08875 IPR007627 RNA polymerase sigma-70 region 2 NDN11_08875 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_08875 IPR013324 RNA polymerase sigma factor, region 3/4-like NDN11_08875 IPR014284 RNA polymerase sigma-70 like domain NDN11_08875 IPR013325 RNA polymerase sigma factor, region 2 NDN11_08875 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 NDN11_08885 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_08885 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor NDN11_08885 IPR011276 TonB-dependent haem/haemoglobin receptor NDN11_08885 IPR010916 TonB box, conserved site NDN11_08885 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_08885 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_08885 IPR039426 Vitamin B12 transporter BtuB-like NDN11_08885 IPR012910 TonB-dependent receptor, plug domain NDN11_08895 IPR007655 Protein of unknown function DUF560 NDN11_08895 IPR013026 Tetratricopeptide repeat-containing domain NDN11_08895 IPR011990 Tetratricopeptide-like helical domain superfamily NDN11_08905 IPR016084 Haem oxygenase-like, multi-helical NDN11_08905 IPR016053 Haem oxygenase-like NDN11_08925 IPR020846 Major facilitator superfamily domain NDN11_08925 IPR036259 MFS transporter superfamily NDN11_08925 IPR005829 Sugar transporter, conserved site NDN11_08925 IPR011701 Major facilitator superfamily NDN11_08935 IPR020449 Transcription regulator HTH, AraC- type NDN11_08935 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal NDN11_08935 IPR018060 DNA binding HTH domain, AraC-type NDN11_08935 IPR009057 Homeobox-like domain superfamily NDN11_08945 IPR003317 Cytochrome ubiquinol oxidase subunit 2 NDN11_08950 IPR002585 Cytochrome ubiquinol oxidase subunit 1 NDN11_08995 IPR004045 Glutathione S-transferase, N-terminal NDN11_08995 IPR036249 Thioredoxin-like superfamily NDN11_08995 IPR010987 Glutathione S-transferase, C-terminal-like NDN11_08995 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NDN11_08995 IPR040079 Glutathione Transferase family NDN11_09000 IPR036390 Winged helix DNA-binding domain superfamily NDN11_09000 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_09000 IPR000847 Transcription regulator HTH, LysR NDN11_09000 IPR005119 LysR, substrate-binding NDN11_09005 IPR023760 Holin-like protein CidA NDN11_09005 IPR005538 LrgA/CidA family NDN11_09010 IPR024891 Antiholin-like protein LrgB NDN11_09010 IPR007300 CidB/LrgB family NDN11_09015 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_09015 IPR012910 TonB-dependent receptor, plug domain NDN11_09015 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_09015 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_09015 IPR010105 TonB-dependent siderophore receptor NDN11_09015 IPR039426 Vitamin B12 transporter BtuB-like NDN11_09020 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_09020 IPR010105 TonB-dependent siderophore receptor NDN11_09020 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_09020 IPR012910 TonB-dependent receptor, plug domain NDN11_09020 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_09020 IPR039423 TonB-dependent receptor-like NDN11_09035 IPR002937 Amine oxidase NDN11_09035 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_09035 IPR001613 Flavin amine oxidase NDN11_09045 IPR033140 Lipase, GDXG, putative serine active site NDN11_09045 IPR002168 Lipase, GDXG, putative histidine active site NDN11_09045 IPR013094 Alpha/beta hydrolase fold-3 NDN11_09045 IPR029058 Alpha/Beta hydrolase fold NDN11_09050 IPR016292 Epoxide hydrolase NDN11_09050 IPR029058 Alpha/Beta hydrolase fold NDN11_09050 IPR000639 Epoxide hydrolase-like NDN11_09050 IPR000073 Alpha/beta hydrolase fold-1 NDN11_09060 IPR009057 Homeobox-like domain superfamily NDN11_09060 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NDN11_09060 IPR001647 DNA-binding HTH domain, TetR-type NDN11_09065 IPR013324 RNA polymerase sigma factor, region 3/4-like NDN11_09065 IPR013325 RNA polymerase sigma factor, region 2 NDN11_09065 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 NDN11_09065 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_09065 IPR039425 RNA polymerase sigma-70 like NDN11_09065 IPR014284 RNA polymerase sigma-70 like domain NDN11_09065 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site NDN11_09065 IPR007627 RNA polymerase sigma-70 region 2 NDN11_09075 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_09075 IPR010105 TonB-dependent siderophore receptor NDN11_09075 IPR012910 TonB-dependent receptor, plug domain NDN11_09075 IPR039423 TonB-dependent receptor-like NDN11_09075 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_09075 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_09095 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent NDN11_09095 IPR011251 Luciferase-like domain NDN11_09095 IPR036661 Luciferase-like domain superfamily NDN11_09100 IPR030678 Peptide/nickel binding protein, MppA-type NDN11_09100 IPR039424 Solute-binding protein family 5 NDN11_09100 IPR023765 Solute-binding protein family 5, conserved site NDN11_09100 IPR000914 Solute-binding protein family 5 domain NDN11_09105 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_09105 IPR035906 MetI-like superfamily NDN11_09110 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NDN11_09110 IPR035906 MetI-like superfamily NDN11_09110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_09115 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_09115 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal NDN11_09115 IPR017871 ABC transporter, conserved site NDN11_09115 IPR003593 AAA+ ATPase domain NDN11_09115 IPR003439 ABC transporter-like NDN11_09120 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_09120 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_09120 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_09120 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_09120 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_09120 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain NDN11_09130 IPR011527 ABC transporter type 1, transmembrane domain NDN11_09130 IPR011917 ABC transporter, lipid A export, MsbA NDN11_09130 IPR039421 Type I protein exporter NDN11_09130 IPR003439 ABC transporter-like NDN11_09130 IPR036640 ABC transporter type 1, transmembrane domain superfamily NDN11_09130 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_09130 IPR017871 ABC transporter, conserved site NDN11_09130 IPR003593 AAA+ ATPase domain NDN11_09135 IPR011527 ABC transporter type 1, transmembrane domain NDN11_09135 IPR039421 Type I protein exporter NDN11_09135 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_09135 IPR017871 ABC transporter, conserved site NDN11_09135 IPR003439 ABC transporter-like NDN11_09135 IPR036640 ABC transporter type 1, transmembrane domain superfamily NDN11_09135 IPR003593 AAA+ ATPase domain NDN11_09145 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_09145 IPR010101 TonB-dependent vitamin B12 transporter BtuB NDN11_09145 IPR039426 Vitamin B12 transporter BtuB-like NDN11_09145 IPR010917 TonB-dependent receptor, conserved site NDN11_09145 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_09145 IPR010916 TonB box, conserved site NDN11_09145 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_09145 IPR012910 TonB-dependent receptor, plug domain NDN11_09155 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent NDN11_09155 IPR036661 Luciferase-like domain superfamily NDN11_09155 IPR011251 Luciferase-like domain NDN11_09160 IPR003593 AAA+ ATPase domain NDN11_09160 IPR009057 Homeobox-like domain superfamily NDN11_09160 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_09160 IPR002078 RNA polymerase sigma factor 54 interaction domain NDN11_09160 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NDN11_09160 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NDN11_09160 IPR025944 Sigma-54 interaction domain, conserved site NDN11_09160 IPR029995 Transcriptional activator SfnR/FlbD NDN11_09165 IPR019820 Sec-independent periplasmic protein translocase, conserved site NDN11_09165 IPR002033 Sec-independent periplasmic protein translocase TatC NDN11_09170 IPR018448 Twin-arginine translocation protein TatB NDN11_09170 IPR003369 Sec-independent protein translocase protein TatA/B/E NDN11_09175 IPR003369 Sec-independent protein translocase protein TatA/B/E NDN11_09175 IPR006312 Sec-independent protein translocase protein TatA/E NDN11_09180 IPR017871 ABC transporter, conserved site NDN11_09180 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB NDN11_09180 IPR003439 ABC transporter-like NDN11_09180 IPR003593 AAA+ ATPase domain NDN11_09180 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_09185 IPR035906 MetI-like superfamily NDN11_09185 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_09190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_09190 IPR035906 MetI-like superfamily NDN11_09190 IPR005889 Nitrate transport permease NDN11_09200 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent NDN11_09200 IPR011251 Luciferase-like domain NDN11_09200 IPR036661 Luciferase-like domain superfamily NDN11_09205 IPR037682 TonB, C-terminal NDN11_09205 IPR006260 TonB/TolA, C-terminal NDN11_09205 IPR003538 Gram-negative bacterial TonB protein NDN11_09210 IPR002898 MotA/TolQ/ExbB proton channel NDN11_09215 IPR003400 Biopolymer transport protein ExbD/TolR NDN11_09220 IPR030678 Peptide/nickel binding protein, MppA-type NDN11_09220 IPR039424 Solute-binding protein family 5 NDN11_09220 IPR023765 Solute-binding protein family 5, conserved site NDN11_09220 IPR000914 Solute-binding protein family 5 domain NDN11_09230 IPR010105 TonB-dependent siderophore receptor NDN11_09230 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_09230 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_09230 IPR039423 TonB-dependent receptor-like NDN11_09230 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_09230 IPR012910 TonB-dependent receptor, plug domain NDN11_09235 IPR036661 Luciferase-like domain superfamily NDN11_09235 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent NDN11_09235 IPR011251 Luciferase-like domain NDN11_09240 IPR005025 NADPH-dependent FMN reductase-like NDN11_09240 IPR019912 FMN reductase, MsuE-like NDN11_09240 IPR029039 Flavoprotein-like superfamily NDN11_09245 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_09245 IPR036390 Winged helix DNA-binding domain superfamily NDN11_09245 IPR005119 LysR, substrate-binding NDN11_09245 IPR000847 Transcription regulator HTH, LysR NDN11_09250 IPR036291 NAD(P)-binding domain superfamily NDN11_09250 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_09250 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_09250 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase NDN11_09260 IPR018668 DNA-binding protein VF530-like NDN11_09260 IPR036361 SAP domain superfamily NDN11_09280 IPR042174 DNA-binding RecF, domain 2 NDN11_09280 IPR003395 RecF/RecN/SMC, N-terminal NDN11_09280 IPR001238 DNA-binding, RecF NDN11_09280 IPR018078 DNA-binding, RecF, conserved site NDN11_09280 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_09285 IPR034739 UvrD/AddA helicase, N-terminal NDN11_09285 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type NDN11_09285 IPR004586 RecBCD enzyme subunit RecB NDN11_09285 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_09285 IPR014017 UvrD-like DNA helicase, C-terminal NDN11_09285 IPR011604 Exonuclease, phage-type/RecB, C-terminal NDN11_09285 IPR000212 DNA helicase, UvrD/REP type NDN11_09285 IPR014016 UvrD-like helicase, ATP-binding domain NDN11_09285 IPR011335 Restriction endonuclease type II-like NDN11_09395 IPR000462 CDP-alcohol phosphatidyltransferase NDN11_09400 IPR022744 Methyltransferase domain, putative NDN11_09400 IPR022742 Serine aminopeptidase, S33 NDN11_09400 IPR029058 Alpha/Beta hydrolase fold NDN11_09400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_09405 IPR000387 Tyrosine specific protein phosphatases domain NDN11_09405 IPR020422 Dual specificity protein phosphatase domain NDN11_09405 IPR016130 Protein-tyrosine phosphatase, active site NDN11_09405 IPR000340 Dual specificity phosphatase, catalytic domain NDN11_09405 IPR029021 Protein-tyrosine phosphatase-like NDN11_09405 IPR003595 Protein-tyrosine phosphatase, catalytic NDN11_09420 IPR000374 Phosphatidate cytidylyltransferase NDN11_09425 IPR009057 Homeobox-like domain superfamily NDN11_09425 IPR018060 DNA binding HTH domain, AraC-type NDN11_09430 IPR003680 Flavodoxin-like fold NDN11_09430 IPR029039 Flavoprotein-like superfamily NDN11_09440 IPR006860 FecR protein NDN11_09440 IPR032623 FecR, N-terminal NDN11_09440 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NDN11_09445 IPR014284 RNA polymerase sigma-70 like domain NDN11_09445 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site NDN11_09445 IPR007627 RNA polymerase sigma-70 region 2 NDN11_09445 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 NDN11_09445 IPR013325 RNA polymerase sigma factor, region 2 NDN11_09445 IPR013324 RNA polymerase sigma factor, region 3/4-like NDN11_09445 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_09445 IPR039425 RNA polymerase sigma-70 like NDN11_09455 IPR008475 Bacterial phospholipase C, C-terminal domain NDN11_09455 IPR017767 Bacterial phospholipase C, phosphocholine-specific NDN11_09455 IPR017850 Alkaline-phosphatase-like, core domain superfamily NDN11_09455 IPR007312 Phosphoesterase NDN11_09455 IPR006311 Twin-arginine translocation pathway, signal sequence NDN11_09465 IPR029787 Nucleotide cyclase NDN11_09465 IPR000160 GGDEF domain NDN11_09470 IPR020541 Chorismate synthase, conserved site NDN11_09470 IPR035904 Chorismate synthase AroC superfamily NDN11_09470 IPR000453 Chorismate synthase NDN11_09475 IPR004556 Methyltransferase HemK-like NDN11_09475 IPR007848 Methyltransferase small domain NDN11_09475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_09475 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase NDN11_09475 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NDN11_09480 IPR001926 Pyridoxal-phosphate dependent enzyme NDN11_09480 IPR006653 Tryptophan synthase, beta chain, conserved site NDN11_09480 IPR006654 Tryptophan synthase, beta chain NDN11_09480 IPR023026 Tryptophan synthase beta chain/beta chain-like NDN11_09480 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NDN11_09490 IPR037219 Peptidase M41-like NDN11_09490 IPR000642 Peptidase M41 NDN11_09490 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_09490 IPR003959 ATPase, AAA-type, core NDN11_09490 IPR003593 AAA+ ATPase domain NDN11_09490 IPR005936 Peptidase, FtsH NDN11_09490 IPR041569 AAA ATPase, AAA+ lid domain NDN11_09500 IPR027354 YcgL domain NDN11_09500 IPR038068 YcgL-like superfamily NDN11_09505 IPR002562 3'-5' exonuclease domain NDN11_09505 IPR010997 HRDC-like superfamily NDN11_09505 IPR006292 Ribonuclease D NDN11_09505 IPR012337 Ribonuclease H-like superfamily NDN11_09505 IPR036397 Ribonuclease H superfamily NDN11_09505 IPR002121 HRDC domain NDN11_09510 IPR034137 RecR, TOPRIM domain NDN11_09510 IPR006171 TOPRIM domain NDN11_09510 IPR000093 DNA recombination protein RecR NDN11_09510 IPR023627 Recombination protein RecR NDN11_09510 IPR023628 Recombination protein RecR, C4-type zinc finger NDN11_09510 IPR015967 Recombination protein RecR, conserved site NDN11_09515 IPR004401 Nucleoid-associated protein YbaB/EbfC family NDN11_09515 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily NDN11_09520 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme NDN11_09520 IPR006234 O-succinylhomoserine sulfhydrylase NDN11_09520 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_09520 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_09520 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_09530 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain NDN11_09530 IPR036291 NAD(P)-binding domain superfamily NDN11_09530 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding NDN11_09530 IPR015815 3-hydroxyisobutyrate dehydrogenase-related NDN11_09530 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_09530 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site NDN11_09530 IPR013328 6-phosphogluconate dehydrogenase, domain 2 NDN11_09545 IPR000868 Isochorismatase-like NDN11_09545 IPR036380 Isochorismatase-like superfamily NDN11_09560 IPR000390 Small multidrug resistance protein family NDN11_09565 IPR023346 Lysozyme-like domain superfamily NDN11_09565 IPR034690 Endolysin T4 type NDN11_09565 IPR002196 Glycoside hydrolase, family 24 NDN11_09580 IPR001310 Histidine triad (HIT) protein NDN11_09580 IPR019808 Histidine triad, conserved site NDN11_09580 IPR036265 HIT-like superfamily NDN11_09580 IPR011146 HIT-like domain NDN11_09580 IPR039384 HINT family NDN11_09605 IPR003835 Glycosyl transferase, family 19 NDN11_09635 IPR002781 Transmembrane protein TauE-like NDN11_09640 IPR013785 Aldolase-type TIM barrel NDN11_09640 IPR006218 DAHP synthetase I/KDSA NDN11_09640 IPR006219 DHAP synthase, class 1 NDN11_09645 IPR008162 Inorganic pyrophosphatase NDN11_09645 IPR036649 Inorganic pyrophosphatase superfamily NDN11_09660 IPR039426 Vitamin B12 transporter BtuB-like NDN11_09660 IPR012910 TonB-dependent receptor, plug domain NDN11_09660 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_09660 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_09660 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_09660 IPR010917 TonB-dependent receptor, conserved site NDN11_09660 IPR010916 TonB box, conserved site NDN11_09670 IPR003805 Adenosylcobinamide-GDP ribazoletransferase NDN11_09685 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like NDN11_09685 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal NDN11_09685 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic NDN11_09685 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily NDN11_09690 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase NDN11_09690 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_09700 IPR010976 Beta-phosphoglucomutase hydrolase NDN11_09700 IPR036412 HAD-like superfamily NDN11_09700 IPR023198 Phosphoglycolate phosphatase-like, domain 2 NDN11_09700 IPR023214 HAD superfamily NDN11_09700 IPR041492 Haloacid dehalogenase-like hydrolase NDN11_09700 IPR006439 HAD hydrolase, subfamily IA NDN11_09710 IPR010105 TonB-dependent siderophore receptor NDN11_09710 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_09710 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_09710 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_09710 IPR012910 TonB-dependent receptor, plug domain NDN11_09710 IPR039426 Vitamin B12 transporter BtuB-like NDN11_09715 IPR011701 Major facilitator superfamily NDN11_09715 IPR020846 Major facilitator superfamily domain NDN11_09715 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 NDN11_09715 IPR036259 MFS transporter superfamily NDN11_09730 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal NDN11_09730 IPR022770 Ferric iron reductase FhuF domain NDN11_09730 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like NDN11_09735 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_09735 IPR031043 Putative histamine N-monooxygenase NDN11_09735 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase NDN11_09740 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal NDN11_09740 IPR022770 Ferric iron reductase FhuF domain NDN11_09740 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like NDN11_09745 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC NDN11_09745 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain NDN11_09745 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily NDN11_09755 IPR004147 UbiB domain NDN11_09755 IPR011009 Protein kinase-like domain superfamily NDN11_09760 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_09760 IPR002938 FAD-binding domain NDN11_09760 IPR012733 4-hydroxybenzoate 3-monooxygenase NDN11_09765 IPR036390 Winged helix DNA-binding domain superfamily NDN11_09765 IPR029016 GAF-like domain superfamily NDN11_09765 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR NDN11_09765 IPR014757 Transcription regulator IclR, C-terminal NDN11_09765 IPR005471 Transcription regulator IclR, N-terminal NDN11_09765 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_09770 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_09770 IPR016160 Aldehyde dehydrogenase, cysteine active site NDN11_09770 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NDN11_09770 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_09770 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_09770 IPR015590 Aldehyde dehydrogenase domain NDN11_09775 IPR023446 Carnitine operon protein CaiE NDN11_09775 IPR001451 Hexapeptide repeat NDN11_09775 IPR011004 Trimeric LpxA-like superfamily NDN11_09780 IPR013225 PaaX-like, C-terminal NDN11_09780 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX NDN11_09780 IPR012906 PaaX-like, N-terminal NDN11_09780 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_09785 IPR000873 AMP-dependent synthetase/ligase NDN11_09785 IPR028154 AMP-dependent ligase, C-terminal NDN11_09785 IPR042099 AMP-dependent synthetase-like superfamily NDN11_09785 IPR011880 Phenylacetate-CoA ligase NDN11_09790 IPR020615 Thiolase, acyl-enzyme intermediate active site NDN11_09790 IPR020610 Thiolase, active site NDN11_09790 IPR020617 Thiolase, C-terminal NDN11_09790 IPR020613 Thiolase, conserved site NDN11_09790 IPR020616 Thiolase, N-terminal NDN11_09790 IPR012793 Beta-ketoadipyl CoA thiolase NDN11_09790 IPR016039 Thiolase-like NDN11_09790 IPR002155 Thiolase NDN11_09795 IPR036291 NAD(P)-binding domain superfamily NDN11_09795 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal NDN11_09795 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain NDN11_09795 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC NDN11_09795 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding NDN11_09795 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_09795 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site NDN11_09800 IPR014748 Enoyl-CoA hydratase, C-terminal NDN11_09800 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB NDN11_09800 IPR001753 Enoyl-CoA hydratase/isomerase NDN11_09800 IPR029045 ClpP/crotonase-like domain superfamily NDN11_09805 IPR014748 Enoyl-CoA hydratase, C-terminal NDN11_09805 IPR029045 ClpP/crotonase-like domain superfamily NDN11_09805 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NDN11_09805 IPR001753 Enoyl-CoA hydratase/isomerase NDN11_09810 IPR001433 Oxidoreductase FAD/NAD(P)-binding NDN11_09810 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NDN11_09810 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase NDN11_09810 IPR017927 FAD-binding domain, ferredoxin reductase-type NDN11_09810 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NDN11_09810 IPR012675 Beta-grasp domain superfamily NDN11_09810 IPR017938 Riboflavin synthase-like beta-barrel NDN11_09810 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site NDN11_09810 IPR036010 2Fe-2S ferredoxin-like superfamily NDN11_09810 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit NDN11_09810 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NDN11_09815 IPR034904 Fe-S cluster assembly domain superfamily NDN11_09815 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit NDN11_09815 IPR002744 MIP18 family-like NDN11_09820 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C NDN11_09820 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C NDN11_09820 IPR009078 Ferritin-like superfamily NDN11_09820 IPR012347 Ferritin-like NDN11_09825 IPR038693 Phenylacetyl-CoA epoxidase, subunit B NDN11_09825 IPR009359 Phenylacetic acid degradation B NDN11_09830 IPR009078 Ferritin-like superfamily NDN11_09830 IPR012347 Ferritin-like NDN11_09830 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A NDN11_09830 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C NDN11_09835 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_09835 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_09835 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_09835 IPR015590 Aldehyde dehydrogenase domain NDN11_09835 IPR011966 Phenylacetic acid degradation protein PaaN NDN11_09835 IPR029069 HotDog domain superfamily NDN11_09835 IPR002539 MaoC-like dehydratase domain NDN11_09845 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_09845 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_09845 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NDN11_09845 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_09845 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_09845 IPR006089 Acyl-CoA dehydrogenase, conserved site NDN11_09845 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_09850 IPR006089 Acyl-CoA dehydrogenase, conserved site NDN11_09850 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_09850 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_09850 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_09850 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NDN11_09850 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_09850 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_09855 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_09855 IPR023753 FAD/NAD(P)-binding domain NDN11_09855 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily NDN11_09855 IPR006322 Glutathione reductase, eukaryote/bacterial NDN11_09855 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I NDN11_09855 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NDN11_09855 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site NDN11_09860 IPR005804 Fatty acid desaturase domain NDN11_09860 IPR033885 Alkane/xylene monooxygenase NDN11_09865 IPR032783 AraC-type transcription regulator, ligand-binding domain NDN11_09865 IPR009057 Homeobox-like domain superfamily NDN11_09865 IPR018060 DNA binding HTH domain, AraC-type NDN11_09865 IPR018062 HTH domain AraC-type, conserved site NDN11_09865 IPR014710 RmlC-like jelly roll fold NDN11_09865 IPR011051 RmlC-like cupin domain superfamily NDN11_09865 IPR020449 Transcription regulator HTH, AraC- type NDN11_09870 IPR011004 Trimeric LpxA-like superfamily NDN11_09870 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase NDN11_09870 IPR018357 Hexapeptide transferase, conserved site NDN11_09870 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal NDN11_09870 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily NDN11_09870 IPR001451 Hexapeptide repeat NDN11_09875 IPR029069 HotDog domain superfamily NDN11_09875 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ NDN11_09875 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ NDN11_09880 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region NDN11_09880 IPR011004 Trimeric LpxA-like superfamily NDN11_09880 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD NDN11_09880 IPR001451 Hexapeptide repeat NDN11_09890 IPR034746 POTRA domain NDN11_09890 IPR000184 Bacterial surface antigen (D15) NDN11_09890 IPR010827 POTRA domain, BamA/TamA-like NDN11_09890 IPR039910 Surface antigen D15-like NDN11_09890 IPR023707 Outer membrane protein assembly factor BamA NDN11_09895 IPR008915 Peptidase M50 NDN11_09895 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase NDN11_09895 IPR041489 PDZ domain 6 NDN11_09895 IPR001478 PDZ domain NDN11_09895 IPR036034 PDZ superfamily NDN11_09900 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase NDN11_09900 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal NDN11_09900 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal NDN11_09900 IPR026877 DXP reductoisomerase C-terminal domain NDN11_09900 IPR036169 DXP reductoisomerase, C-terminal domain superfamily NDN11_09900 IPR036291 NAD(P)-binding domain superfamily NDN11_09905 IPR000374 Phosphatidate cytidylyltransferase NDN11_09910 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site NDN11_09910 IPR036424 Decaprenyl diphosphate synthase-like superfamily NDN11_09910 IPR001441 Decaprenyl diphosphate synthase-like NDN11_09915 IPR002661 Ribosome recycling factor NDN11_09915 IPR023584 Ribosome recycling factor domain NDN11_09915 IPR036191 RRF superfamily NDN11_09920 IPR036393 Acetylglutamate kinase-like superfamily NDN11_09920 IPR001048 Aspartate/glutamate/uridylate kinase NDN11_09920 IPR011817 Uridylate kinase NDN11_09920 IPR015963 Uridylate kinase, bacteria NDN11_09925 IPR023404 Radical SAM, alpha/beta horseshoe NDN11_09925 IPR007197 Radical SAM NDN11_09925 IPR041582 RimO, TRAM domain NDN11_09925 IPR005840 Ribosomal protein S12 methylthiotransferase RimO NDN11_09925 IPR013848 Methylthiotransferase, N-terminal NDN11_09925 IPR020612 Methylthiotransferase, conserved site NDN11_09925 IPR002792 TRAM domain NDN11_09925 IPR006638 Elp3/MiaB/NifB NDN11_09925 IPR038135 Methylthiotransferase, N-terminal domain superfamily NDN11_09925 IPR005839 Methylthiotransferase NDN11_09930 IPR013767 PAS fold NDN11_09930 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_09930 IPR035965 PAS domain superfamily NDN11_09930 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_09930 IPR000014 PAS domain NDN11_09930 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_09930 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_09930 IPR005467 Histidine kinase domain NDN11_09930 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_09935 IPR025944 Sigma-54 interaction domain, conserved site NDN11_09935 IPR003593 AAA+ ATPase domain NDN11_09935 IPR011006 CheY-like superfamily NDN11_09935 IPR009057 Homeobox-like domain superfamily NDN11_09935 IPR002197 DNA binding HTH domain, Fis-type NDN11_09935 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_09935 IPR001789 Signal transduction response regulator, receiver domain NDN11_09935 IPR002078 RNA polymerase sigma factor 54 interaction domain NDN11_09935 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NDN11_09935 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NDN11_09935 IPR010114 DNA-binding transcriptional regulator NtrC NDN11_09940 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NDN11_09940 IPR001647 DNA-binding HTH domain, TetR-type NDN11_09940 IPR009057 Homeobox-like domain superfamily NDN11_09945 IPR006130 Aspartate/ornithine carbamoyltransferase NDN11_09945 IPR024904 Ornithine carbamoyltransferase NDN11_09945 IPR002292 Ornithine/putrescine carbamoyltransferase NDN11_09945 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily NDN11_09945 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain NDN11_09945 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding NDN11_09955 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase NDN11_09955 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site NDN11_09955 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily NDN11_09965 IPR023080 D-amino acid dehydrogenase DadA NDN11_09965 IPR006076 FAD dependent oxidoreductase NDN11_09965 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_09980 IPR022761 Fumarate lyase, N-terminal NDN11_09980 IPR020557 Fumarate lyase, conserved site NDN11_09980 IPR008948 L-Aspartase-like NDN11_09980 IPR024083 Fumarase/histidase, N-terminal NDN11_09980 IPR018951 Fumarase C, C-terminal NDN11_09980 IPR000362 Fumarate lyase family NDN11_09980 IPR005677 Fumarate hydratase, class II NDN11_09985 IPR016040 NAD(P)-binding domain NDN11_09985 IPR036291 NAD(P)-binding domain superfamily NDN11_09985 IPR005886 UDP-glucose 4-epimerase NDN11_09990 IPR027396 DsrEFH-like NDN11_09990 IPR003787 Sulphur relay, DsrE/F-like protein NDN11_09990 IPR017463 Sulphur relay, TusD/DsrE NDN11_10005 IPR042072 DsrC-like protein, C-terminal domain NDN11_10005 IPR025526 DsrC-like domain superfamily NDN11_10005 IPR007453 Sulphur transfer protein DsrC/TusE NDN11_10010 IPR000620 EamA domain NDN11_10015 IPR000524 Transcription regulator HTH, GntR NDN11_10015 IPR004839 Aminotransferase, class I/classII NDN11_10015 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_10015 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_10015 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_10015 IPR036390 Winged helix DNA-binding domain superfamily NDN11_10015 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_10020 IPR011991 ArsR-like helix-turn-helix domain NDN11_10020 IPR036390 Winged helix DNA-binding domain superfamily NDN11_10020 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_10020 IPR002577 Helix-turn-helix, HxlR type NDN11_10025 IPR008284 Molybdenum cofactor biosynthesis, conserved site NDN11_10025 IPR001453 MoaB/Mog domain NDN11_10025 IPR036425 MoaB/Mog-like domain superfamily NDN11_10025 IPR038987 Molybdopterin biosynthesis protein MoeA-like NDN11_10025 IPR005110 MoeA, N-terminal and linker domain NDN11_10025 IPR036135 MoeA, N-terminal and linker domain superfamily NDN11_10025 IPR005111 MoeA, C-terminal, domain IV NDN11_10025 IPR036688 MoeA, C-terminal, domain IV superfamily NDN11_10030 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain NDN11_10030 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily NDN11_10030 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA NDN11_10030 IPR001453 MoaB/Mog domain NDN11_10030 IPR036425 MoaB/Mog-like domain superfamily NDN11_10030 IPR023045 Molybdenum cofactor biosynthesis C NDN11_10035 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily NDN11_10035 IPR003448 Molybdopterin biosynthesis MoaE NDN11_10045 IPR010505 Molybdenum cofactor synthesis C-terminal NDN11_10045 IPR013785 Aldolase-type TIM barrel NDN11_10045 IPR006638 Elp3/MiaB/NifB NDN11_10045 IPR013483 Molybdenum cofactor biosynthesis protein A NDN11_10045 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site NDN11_10045 IPR007197 Radical SAM NDN11_10050 IPR009010 Aspartate decarboxylase-like domain superfamily NDN11_10050 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain NDN11_10050 IPR006657 Molybdopterin dinucleotide-binding domain NDN11_10050 IPR006656 Molybdopterin oxidoreductase NDN11_10050 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain NDN11_10050 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site NDN11_10060 IPR011780 D-serine ammonia-lyase NDN11_10060 IPR001926 Pyridoxal-phosphate dependent enzyme NDN11_10060 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site NDN11_10060 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NDN11_10065 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_10065 IPR005119 LysR, substrate-binding NDN11_10065 IPR000847 Transcription regulator HTH, LysR NDN11_10065 IPR036390 Winged helix DNA-binding domain superfamily NDN11_10070 IPR010645 Uncharacterised MFS-type transporter YbfB NDN11_10070 IPR036259 MFS transporter superfamily NDN11_10075 IPR025877 MobA-like NTP transferase NDN11_10075 IPR029044 Nucleotide-diphospho-sugar transferases NDN11_10075 IPR013482 Molybdenum cofactor guanylyltransferase NDN11_10080 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain NDN11_10080 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site NDN11_10080 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain NDN11_10080 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily NDN11_10080 IPR007419 BFD-like [2Fe-2S]-binding domain NDN11_10080 IPR006657 Molybdopterin dinucleotide-binding domain NDN11_10080 IPR006656 Molybdopterin oxidoreductase NDN11_10080 IPR009010 Aspartate decarboxylase-like domain superfamily NDN11_10085 IPR017121 Nitrite reductase [NAD(P)H], large subunit NDN11_10085 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB NDN11_10085 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal NDN11_10085 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site NDN11_10085 IPR007419 BFD-like [2Fe-2S]-binding domain NDN11_10085 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily NDN11_10085 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain NDN11_10085 IPR023753 FAD/NAD(P)-binding domain NDN11_10085 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily NDN11_10085 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain NDN11_10085 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily NDN11_10085 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_10090 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site NDN11_10090 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal NDN11_10090 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NDN11_10090 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type NDN11_10090 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain NDN11_10090 IPR023753 FAD/NAD(P)-binding domain NDN11_10090 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily NDN11_10090 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain NDN11_10090 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_10090 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily NDN11_10090 IPR007419 BFD-like [2Fe-2S]-binding domain NDN11_10090 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB NDN11_10095 IPR011701 Major facilitator superfamily NDN11_10095 IPR020846 Major facilitator superfamily domain NDN11_10095 IPR036259 MFS transporter superfamily NDN11_10095 IPR004737 Nitrate transporter NDN11_10105 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_10105 IPR005890 Nitrate transport ATP-binding subunit C/D NDN11_10105 IPR003593 AAA+ ATPase domain NDN11_10105 IPR003439 ABC transporter-like NDN11_10105 IPR017871 ABC transporter, conserved site NDN11_10110 IPR001874 Dehydroquinase, class II NDN11_10110 IPR018509 Dehydroquinase, class II, conserved site NDN11_10110 IPR036441 Dehydroquinase, class II superfamily NDN11_10115 IPR001249 Acetyl-CoA biotin carboxyl carrier NDN11_10115 IPR001882 Biotin-binding site NDN11_10115 IPR000089 Biotin/lipoyl attachment NDN11_10115 IPR011053 Single hybrid motif NDN11_10120 IPR011054 Rudiment single hybrid motif NDN11_10120 IPR016185 Pre-ATP-grasp domain superfamily NDN11_10120 IPR005482 Biotin carboxylase, C-terminal NDN11_10120 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NDN11_10120 IPR005481 Biotin carboxylase-like, N-terminal domain NDN11_10120 IPR013815 ATP-grasp fold, subdomain 1 NDN11_10120 IPR011761 ATP-grasp fold NDN11_10120 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase NDN11_10120 IPR011764 Biotin carboxylation domain NDN11_10130 IPR000120 Amidase NDN11_10130 IPR020556 Amidase, conserved site NDN11_10130 IPR023631 Amidase signature domain NDN11_10130 IPR036928 Amidase signature (AS) superfamily NDN11_10135 IPR026032 Probable 3-phenylpropionic acid transporter NDN11_10135 IPR024989 Major facilitator superfamily associated domain NDN11_10135 IPR036259 MFS transporter superfamily NDN11_10140 IPR004841 Amino acid permease/ SLC12A domain NDN11_10140 IPR004840 Amino acid permease, conserved site NDN11_10150 IPR034330 Glutathione S-transferases, class Zeta , C-terminal NDN11_10150 IPR036249 Thioredoxin-like superfamily NDN11_10150 IPR005955 Glutathione S-transferases, class Zeta NDN11_10150 IPR034333 Glutathione S-transferases, class Zeta , N-terminal NDN11_10150 IPR004045 Glutathione S-transferase, N-terminal NDN11_10150 IPR040079 Glutathione Transferase family NDN11_10150 IPR010987 Glutathione S-transferase, C-terminal-like NDN11_10150 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NDN11_10150 IPR004046 Glutathione S-transferase, C-terminal NDN11_10165 IPR037523 Vicinal oxygen chelate (VOC) domain NDN11_10165 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NDN11_10165 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NDN11_10165 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal NDN11_10165 IPR005956 4-hydroxyphenylpyruvate dioxygenase NDN11_10165 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal NDN11_10175 IPR013785 Aldolase-type TIM barrel NDN11_10175 IPR024188 Glutamate synthase large subunit-like protein NDN11_10175 IPR002932 Glutamate synthase domain NDN11_10175 IPR027283 Glutamate synthase large subunit-like protein, bacteria NDN11_10205 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily NDN11_10205 IPR006094 FAD linked oxidase, N-terminal NDN11_10205 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal NDN11_10205 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase NDN11_10205 IPR016169 FAD-binding, type PCMH, subdomain 2 NDN11_10205 IPR016167 FAD-binding, type PCMH, subdomain 1 NDN11_10205 IPR036318 FAD-binding, type PCMH-like superfamily NDN11_10205 IPR016166 FAD-binding domain, PCMH-type NDN11_10210 IPR023485 Phosphotyrosine protein phosphatase I NDN11_10210 IPR036196 Phosphotyrosine protein phosphatase I superfamily NDN11_10210 IPR017867 Protein-tyrosine phosphatase, low molecular weight NDN11_10235 IPR012338 Beta-lactamase/transpeptidase-like NDN11_10235 IPR000871 Beta-lactamase, class-A NDN11_10235 IPR023650 Beta-lactamase, class-A active site NDN11_10250 IPR039697 Iron-type alcohol dehydrogenase-like NDN11_10250 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA NDN11_10250 IPR018211 Alcohol dehydrogenase, iron-type, conserved site NDN11_10255 IPR029069 HotDog domain superfamily NDN11_10255 IPR006683 Thioesterase domain NDN11_10260 IPR021029 DNA polymerase III, tau subunit, domain V NDN11_10260 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily NDN11_10260 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_10260 IPR012763 DNA polymerase III, subunit gamma/ tau NDN11_10260 IPR003593 AAA+ ATPase domain NDN11_10260 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV NDN11_10260 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal NDN11_10260 IPR001270 ClpA/B family NDN11_10260 IPR022754 DNA polymerase III, gamma subunit, domain III NDN11_10265 IPR003347 JmjC domain NDN11_10265 IPR039994 JmjC domain-containing NDN11_10285 IPR011991 ArsR-like helix-turn-helix domain NDN11_10285 IPR001845 HTH ArsR-type DNA-binding domain NDN11_10285 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_10285 IPR036390 Winged helix DNA-binding domain superfamily NDN11_10290 IPR011547 SLC26A/SulP transporter domain NDN11_10290 IPR001902 SLC26A/SulP transporter NDN11_10290 IPR002645 STAS domain NDN11_10290 IPR036513 STAS domain superfamily NDN11_10295 IPR023025 Serine/threonine transporter SstT NDN11_10295 IPR036458 Sodium:dicarboxylate symporter superfamily NDN11_10295 IPR001991 Sodium:dicarboxylate symporter NDN11_10305 IPR018636 Protein of unknown function DUF2058 NDN11_10310 IPR010920 LSM domain superfamily NDN11_10310 IPR006685 Mechanosensitive ion channel MscS NDN11_10310 IPR011066 Mechanosensitive ion channel MscS, C-terminal NDN11_10310 IPR030192 Miniconductance mechanosensitive channel YbdG NDN11_10360 IPR004445 Sodium/glutamate symport carrier protein GltS NDN11_10380 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_10380 IPR011527 ABC transporter type 1, transmembrane domain NDN11_10380 IPR036640 ABC transporter type 1, transmembrane domain superfamily NDN11_10380 IPR003439 ABC transporter-like NDN11_10380 IPR017871 ABC transporter, conserved site NDN11_10380 IPR039421 Type I protein exporter NDN11_10380 IPR003593 AAA+ ATPase domain NDN11_10385 IPR002539 MaoC-like dehydratase domain NDN11_10385 IPR029069 HotDog domain superfamily NDN11_10390 IPR018060 DNA binding HTH domain, AraC-type NDN11_10390 IPR009057 Homeobox-like domain superfamily NDN11_10390 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal NDN11_10390 IPR020449 Transcription regulator HTH, AraC- type NDN11_10395 IPR002930 Glycine cleavage system H-protein NDN11_10395 IPR033753 Glycine cleavage system H-protein/Simiate NDN11_10395 IPR000089 Biotin/lipoyl attachment NDN11_10395 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NDN11_10395 IPR017453 Glycine cleavage system H-protein, subgroup NDN11_10395 IPR011053 Single hybrid motif NDN11_10400 IPR041029 N-acetylglucosamine binding protein A domain 2 NDN11_10400 IPR020879 N-acetylglucosamine-binding protein A NDN11_10400 IPR014756 Immunoglobulin E-set NDN11_10400 IPR004302 Cellulose/chitin-binding protein, N-terminal NDN11_10405 IPR008948 L-Aspartase-like NDN11_10405 IPR020557 Fumarate lyase, conserved site NDN11_10405 IPR000362 Fumarate lyase family NDN11_10405 IPR018951 Fumarase C, C-terminal NDN11_10405 IPR024083 Fumarase/histidase, N-terminal NDN11_10405 IPR004708 Aspartate ammonia-lyase NDN11_10405 IPR022761 Fumarate lyase, N-terminal NDN11_10410 IPR011851 Sodium/proline symporter NDN11_10410 IPR001734 Sodium/solute symporter NDN11_10410 IPR018212 Sodium/solute symporter, conserved site NDN11_10410 IPR038377 Sodium/glucose symporter superfamily NDN11_10415 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NDN11_10415 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_10415 IPR036390 Winged helix DNA-binding domain superfamily NDN11_10415 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NDN11_10415 IPR011991 ArsR-like helix-turn-helix domain NDN11_10415 IPR000485 AsnC-type HTH domain NDN11_10415 IPR019888 Transcription regulator AsnC-type NDN11_10415 IPR011008 Dimeric alpha-beta barrel NDN11_10420 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_10420 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NDN11_10420 IPR010985 Ribbon-helix-helix NDN11_10420 IPR002872 Proline dehydrogenase domain NDN11_10420 IPR024082 Proline dehydrogenase PutA, domain II NDN11_10420 IPR024089 Proline dehydrogenase PutA, domain I/II NDN11_10420 IPR024090 Proline dehydrogenase PutA, domain I NDN11_10420 IPR016160 Aldehyde dehydrogenase, cysteine active site NDN11_10420 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_10420 IPR013321 Arc-type ribbon-helix-helix NDN11_10420 IPR025703 Bifunctional protein PutA NDN11_10420 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 NDN11_10420 IPR015590 Aldehyde dehydrogenase domain NDN11_10420 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_10420 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain NDN11_10420 IPR029041 FAD-linked oxidoreductase-like NDN11_10425 IPR007344 GrpB/Dephospho-CoA kinase NDN11_10430 IPR010280 (Uracil-5)-methyltransferase family NDN11_10430 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA NDN11_10430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_10430 IPR030390 RNA methyltransferase TrmA, active site NDN11_10440 IPR018711 Phosphodiester glycosidase NDN11_10450 IPR018654 Putative toxin of bacterial toxin-antitoxin pair NDN11_10485 IPR036390 Winged helix DNA-binding domain superfamily NDN11_10485 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_10485 IPR006197 Peptidase S24, LexA-like NDN11_10485 IPR015927 Peptidase S24/S26A/S26B/S26C NDN11_10485 IPR006199 LexA repressor, DNA-binding domain NDN11_10485 IPR036286 LexA/Signal peptidase-like superfamily NDN11_10485 IPR039418 LexA-like NDN11_10485 IPR006200 Transcription regulator LexA NDN11_10490 IPR007372 Lipid/polyisoprenoid-binding, YceI-like NDN11_10490 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily NDN11_10490 IPR023480 Uncharacterised protein family UPF0312/YceI NDN11_10510 IPR020826 Transketolase binding site NDN11_10510 IPR029061 Thiamin diphosphate-binding fold NDN11_10510 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II NDN11_10510 IPR005475 Transketolase-like, pyrimidine-binding domain NDN11_10510 IPR005474 Transketolase, N-terminal NDN11_10510 IPR033247 Transketolase family NDN11_10510 IPR033248 Transketolase, C-terminal domain NDN11_10510 IPR005478 Transketolase, bacterial-like NDN11_10515 IPR022628 S-adenosylmethionine synthetase, N-terminal NDN11_10515 IPR002133 S-adenosylmethionine synthetase NDN11_10515 IPR022636 S-adenosylmethionine synthetase superfamily NDN11_10515 IPR022631 S-adenosylmethionine synthetase, conserved site NDN11_10515 IPR022630 S-adenosylmethionine synthetase, C-terminal NDN11_10515 IPR022629 S-adenosylmethionine synthetase, central domain NDN11_10535 IPR005590 Protein of unknown function DUF333 NDN11_10545 IPR006076 FAD dependent oxidoreductase NDN11_10545 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_10550 IPR012340 Nucleic acid-binding, OB-fold NDN11_10550 IPR002059 Cold-shock protein, DNA-binding NDN11_10550 IPR019844 Cold-shock (CSD) domain NDN11_10550 IPR011129 Cold shock domain NDN11_10550 IPR012156 Cold shock, CspA NDN11_10555 IPR012340 Nucleic acid-binding, OB-fold NDN11_10555 IPR012156 Cold shock, CspA NDN11_10555 IPR011129 Cold shock domain NDN11_10555 IPR002059 Cold-shock protein, DNA-binding NDN11_10570 IPR012337 Ribonuclease H-like superfamily NDN11_10570 IPR036397 Ribonuclease H superfamily NDN11_10570 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site NDN11_10570 IPR002176 Crossover junction endodeoxyribonuclease RuvC NDN11_10575 IPR036652 YjeF N-terminal domain superfamily NDN11_10575 IPR004443 YjeF N-terminal domain NDN11_10575 IPR029056 Ribokinase-like NDN11_10575 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr NDN11_10575 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase NDN11_10580 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NDN11_10580 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NDN11_10580 IPR013542 Domain of unknown function DUF1730 NDN11_10580 IPR009051 Alpha-helical ferredoxin NDN11_10580 IPR004453 Epoxyqueuosine reductase QueG NDN11_10585 IPR007197 Radical SAM NDN11_10585 IPR006638 Elp3/MiaB/NifB NDN11_10585 IPR024177 Biotin synthase NDN11_10585 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB NDN11_10585 IPR010722 Biotin and thiamin synthesis-associated domain NDN11_10585 IPR013785 Aldolase-type TIM barrel NDN11_10600 IPR036937 Fimbrial-type adhesion domain superfamily NDN11_10600 IPR039458 FimA-like NDN11_10600 IPR008966 Adhesion domain superfamily NDN11_10605 IPR013783 Immunoglobulin-like fold NDN11_10605 IPR018046 Pili assembly chaperone, conserved site NDN11_10605 IPR016148 Pili assembly chaperone, C-terminal NDN11_10605 IPR016147 Pili assembly chaperone, N-terminal NDN11_10605 IPR008962 PapD-like superfamily NDN11_10605 IPR001829 Pili assembly chaperone, bacterial NDN11_10605 IPR036316 Pili assembly chaperone, C-terminal domain superfamily NDN11_10610 IPR037224 PapC, N-terminal domain superfamily NDN11_10610 IPR000015 Outer membrane usher protein NDN11_10610 IPR018030 Fimbrial membrane usher, conserved site NDN11_10610 IPR042186 Outer membrane usher protein FimD, plug domain NDN11_10610 IPR025949 PapC-like, C-terminal domain NDN11_10610 IPR025885 PapC, N-terminal domain NDN11_10615 IPR015243 FimH, mannose-binding domain NDN11_10615 IPR036937 Fimbrial-type adhesion domain superfamily NDN11_10615 IPR008966 Adhesion domain superfamily NDN11_10630 IPR033797 L-lysine epsilon-oxidase NDN11_10630 IPR041173 L-lysine epsilon oxidase, C-terminal NDN11_10630 IPR041168 L-Lysine epsilon oxidase, N-terminal NDN11_10640 IPR011614 Catalase core domain NDN11_10640 IPR020835 Catalase superfamily NDN11_10725 IPR000868 Isochorismatase-like NDN11_10725 IPR036380 Isochorismatase-like superfamily NDN11_10750 IPR026564 Transcriptional regulator TACO1-like, domain 3 NDN11_10750 IPR002876 Transcriptional regulator TACO1-like NDN11_10750 IPR029072 YebC-like NDN11_10750 IPR017856 Integrase-like, N-terminal NDN11_10765 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_10765 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_10765 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain NDN11_10765 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_10765 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_10775 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A NDN11_10775 IPR011251 Luciferase-like domain NDN11_10775 IPR036661 Luciferase-like domain superfamily NDN11_10780 IPR004872 Lipoprotein NlpA family NDN11_10785 IPR003439 ABC transporter-like NDN11_10785 IPR017871 ABC transporter, conserved site NDN11_10785 IPR026253 Methionine import ATP-binding protein MetN NDN11_10785 IPR003593 AAA+ ATPase domain NDN11_10785 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal NDN11_10785 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain NDN11_10785 IPR018449 NIL domain NDN11_10785 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_10790 IPR035906 MetI-like superfamily NDN11_10790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_10795 IPR012675 Beta-grasp domain superfamily NDN11_10795 IPR041706 YchF, N-terminal NDN11_10795 IPR031167 OBG-type guanine nucleotide-binding (G) domain NDN11_10795 IPR006073 GTP binding domain NDN11_10795 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_10795 IPR004095 TGS NDN11_10795 IPR012676 TGS-like NDN11_10795 IPR023192 TGS-like domain superfamily NDN11_10795 IPR013029 YchF, C-terminal domain NDN11_10795 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 NDN11_10800 IPR009057 Homeobox-like domain superfamily NDN11_10800 IPR003313 AraC-type arabinose-binding/dimerisation domain NDN11_10800 IPR023609 Transcription regulator HTH, RhaS NDN11_10800 IPR020449 Transcription regulator HTH, AraC- type NDN11_10800 IPR037923 Transcription regulator HTH-like NDN11_10800 IPR018060 DNA binding HTH domain, AraC-type NDN11_10800 IPR018062 HTH domain AraC-type, conserved site NDN11_10800 IPR014710 RmlC-like jelly roll fold NDN11_10815 IPR000595 Cyclic nucleotide-binding domain NDN11_10815 IPR036390 Winged helix DNA-binding domain superfamily NDN11_10815 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_10815 IPR014710 RmlC-like jelly roll fold NDN11_10815 IPR012318 Crp-type HTH domain NDN11_10815 IPR018490 Cyclic nucleotide-binding-like NDN11_10830 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type NDN11_10830 IPR004370 4-oxalocrotonate tautomerase NDN11_10830 IPR014347 Tautomerase/MIF superfamily NDN11_10835 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase NDN11_10835 IPR011054 Rudiment single hybrid motif NDN11_10835 IPR013815 ATP-grasp fold, subdomain 1 NDN11_10835 IPR016185 Pre-ATP-grasp domain superfamily NDN11_10835 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type NDN11_10835 IPR011761 ATP-grasp fold NDN11_10840 IPR002912 ACT domain NDN11_10840 IPR003607 HD/PDEase domain NDN11_10840 IPR006674 HD domain NDN11_10840 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase NDN11_10840 IPR002934 Polymerase, nucleotidyl transferase domain NDN11_10840 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme NDN11_10845 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_10845 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_10845 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_10845 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ NDN11_10845 IPR004839 Aminotransferase, class I/classII NDN11_10850 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_10850 IPR039423 TonB-dependent receptor-like NDN11_10850 IPR010917 TonB-dependent receptor, conserved site NDN11_10850 IPR010105 TonB-dependent siderophore receptor NDN11_10850 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_10850 IPR012910 TonB-dependent receptor, plug domain NDN11_10850 IPR030149 TonB-dependent siderophore receptor FcuA/FatA NDN11_10850 IPR010916 TonB box, conserved site NDN11_10850 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_10860 IPR036390 Winged helix DNA-binding domain superfamily NDN11_10860 IPR011991 ArsR-like helix-turn-helix domain NDN11_10860 IPR000485 AsnC-type HTH domain NDN11_10860 IPR011008 Dimeric alpha-beta barrel NDN11_10860 IPR019888 Transcription regulator AsnC-type NDN11_10860 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NDN11_10860 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_10865 IPR006143 RND efflux pump, membrane fusion protein NDN11_10865 IPR039562 Membrane fusion protein, biotin-lipoyl like domain NDN11_10865 IPR022824 Multidrug resistance protein MdtA NDN11_10870 IPR001036 Acriflavin resistance protein NDN11_10870 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NDN11_10875 IPR001123 Amino acid exporter protein, LeuE-type NDN11_10875 IPR004778 Homoserine/Threonine efflux protein NDN11_10885 IPR036249 Thioredoxin-like superfamily NDN11_10885 IPR029760 Glutathione peroxidase conserved site NDN11_10885 IPR029759 Glutathione peroxidase active site NDN11_10885 IPR000889 Glutathione peroxidase NDN11_10890 IPR028427 Peptide methionine sulfoxide reductase NDN11_10890 IPR002579 Peptide methionine sulphoxide reductase MrsB NDN11_10890 IPR011057 Mss4-like superfamily NDN11_10895 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_10895 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_10895 IPR004839 Aminotransferase, class I/classII NDN11_10895 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_10905 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain NDN11_10905 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain NDN11_10905 IPR040982 DNA polymerase III alpha subunit finger domain NDN11_10905 IPR029460 DNA polymerase, helix-hairpin-helix motif NDN11_10905 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type NDN11_10905 IPR004013 PHP domain NDN11_10905 IPR003141 Polymerase/histidinol phosphatase, N-terminal NDN11_10905 IPR016195 Polymerase/histidinol phosphatase-like NDN11_10905 IPR004805 DNA polymerase III, alpha subunit NDN11_10910 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NDN11_10910 IPR004384 RNA methyltransferase TrmJ/LasT NDN11_10910 IPR001537 tRNA/rRNA methyltransferase, SpoU type NDN11_10910 IPR029028 Alpha/beta knot methyltransferases NDN11_10915 IPR011004 Trimeric LpxA-like superfamily NDN11_10915 IPR001451 Hexapeptide repeat NDN11_10915 IPR042122 Serine acetyltransferase, N-terminal domain superfamily NDN11_10915 IPR018357 Hexapeptide transferase, conserved site NDN11_10915 IPR005881 Serine O-acetyltransferase NDN11_10930 IPR036249 Thioredoxin-like superfamily NDN11_10930 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_10930 IPR023753 FAD/NAD(P)-binding domain NDN11_10930 IPR002109 Glutaredoxin NDN11_10930 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site NDN11_10930 IPR012336 Thioredoxin-like fold NDN11_10930 IPR012081 Alkyl hydroperoxide reductase subunit F NDN11_10940 IPR008863 Toxic anion resistance NDN11_10950 IPR038404 TRAP transporter solute receptor DctP superfamily NDN11_10970 IPR003824 Undecaprenyl-diphosphatase UppP NDN11_10980 IPR000836 Phosphoribosyltransferase domain NDN11_10980 IPR017932 Glutamine amidotransferase type 2 domain NDN11_10980 IPR029055 Nucleophile aminohydrolases, N-terminal NDN11_10980 IPR029057 Phosphoribosyltransferase-like NDN11_10980 IPR005854 Amidophosphoribosyltransferase NDN11_10980 IPR035584 Amidophosphoribosyltransferase, N-terminal NDN11_10985 IPR003825 Colicin V production, CvpA NDN11_10990 IPR001295 Dihydroorotate dehydrogenase, conserved site NDN11_10990 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 NDN11_10990 IPR013785 Aldolase-type TIM barrel NDN11_10990 IPR005720 Dihydroorotate dehydrogenase domain NDN11_10990 IPR005719 Dihydroorotate dehydrogenase, class 2 NDN11_11010 IPR036291 NAD(P)-binding domain superfamily NDN11_11010 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal NDN11_11010 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal NDN11_11010 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent NDN11_11010 IPR013328 6-phosphogluconate dehydrogenase, domain 2 NDN11_11010 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_11015 IPR029479 Nitroreductase NDN11_11015 IPR000415 Nitroreductase-like NDN11_11015 IPR026021 Putative NAD(P)H nitroreductase YdjA-like NDN11_11030 IPR001576 Phosphoglycerate kinase NDN11_11030 IPR015911 Phosphoglycerate kinase, conserved site NDN11_11030 IPR015824 Phosphoglycerate kinase, N-terminal NDN11_11030 IPR036043 Phosphoglycerate kinase superfamily NDN11_11040 IPR029001 Inosine triphosphate pyrophosphatase-like NDN11_11040 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein NDN11_11050 IPR020846 Major facilitator superfamily domain NDN11_11050 IPR036259 MFS transporter superfamily NDN11_11050 IPR011701 Major facilitator superfamily NDN11_11065 IPR001466 Beta-lactamase-related NDN11_11065 IPR012338 Beta-lactamase/transpeptidase-like NDN11_11075 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase NDN11_11075 IPR036291 NAD(P)-binding domain superfamily NDN11_11075 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_11075 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_11080 IPR020617 Thiolase, C-terminal NDN11_11080 IPR020616 Thiolase, N-terminal NDN11_11080 IPR020613 Thiolase, conserved site NDN11_11080 IPR020610 Thiolase, active site NDN11_11080 IPR002155 Thiolase NDN11_11080 IPR012806 Acetyl-CoA C-acyltransferase FadI NDN11_11080 IPR016039 Thiolase-like NDN11_11095 IPR010203 Regulator of ribonuclease activity A NDN11_11095 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NDN11_11095 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily NDN11_11100 IPR000534 Semialdehyde dehydrogenase, NAD-binding NDN11_11100 IPR016040 NAD(P)-binding domain NDN11_11100 IPR036291 NAD(P)-binding domain superfamily NDN11_11105 IPR002583 Ribosomal protein S20 NDN11_11105 IPR036510 Ribosomal protein S20 superfamily NDN11_11115 IPR019503 Peptidase M66 domain NDN11_11115 IPR013783 Immunoglobulin-like fold NDN11_11115 IPR022218 ToxR activated gene A lipoprotein domain NDN11_11115 IPR003961 Fibronectin type III NDN11_11115 IPR036116 Fibronectin type III superfamily NDN11_11125 IPR020550 Inositol monophosphatase, conserved site NDN11_11125 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ NDN11_11125 IPR000760 Inositol monophosphatase-like NDN11_11125 IPR020583 Inositol monophosphatase, metal-binding site NDN11_11130 IPR041492 Haloacid dehalogenase-like hydrolase NDN11_11130 IPR006439 HAD hydrolase, subfamily IA NDN11_11130 IPR023214 HAD superfamily NDN11_11130 IPR036412 HAD-like superfamily NDN11_11135 IPR036986 RNA-binding S4 domain superfamily NDN11_11135 IPR002942 RNA-binding S4 domain NDN11_11135 IPR025708 Heat shock protein 15 NDN11_11140 IPR020584 DNA recombination/repair protein RecA, conserved site NDN11_11140 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_11140 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain NDN11_11140 IPR023400 DNA recombination and repair protein RecA, C-terminal NDN11_11140 IPR003593 AAA+ ATPase domain NDN11_11140 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface NDN11_11140 IPR013765 DNA recombination and repair protein RecA NDN11_11145 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_11145 IPR003783 Regulatory protein RecX NDN11_11160 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type NDN11_11160 IPR023059 Foldase protein PrsA NDN11_11160 IPR027304 Trigger factor/SurA domain superfamily NDN11_11160 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site NDN11_11165 IPR000119 Histone-like DNA-binding protein NDN11_11165 IPR020816 Histone-like DNA-binding protein, conserved site NDN11_11165 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily NDN11_11180 IPR000944 Transcription regulator Rrf2-type NDN11_11180 IPR010242 Transcription factor HTH, IscR NDN11_11180 IPR030489 Transcription regulator Rrf2-type, conserved site NDN11_11180 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_11180 IPR036390 Winged helix DNA-binding domain superfamily NDN11_11185 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_11185 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_11185 IPR016454 Cysteine desulfurase NDN11_11185 IPR010240 Cysteine desulfurase IscS NDN11_11185 IPR000192 Aminotransferase class V domain NDN11_11185 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_11185 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site NDN11_11190 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal NDN11_11190 IPR011339 ISC system FeS cluster assembly, IscU scaffold NDN11_11195 IPR000361 FeS cluster biogenesis NDN11_11195 IPR016092 FeS cluster insertion protein NDN11_11195 IPR017870 FeS cluster insertion, C-terminal, conserved site NDN11_11195 IPR035903 HesB-like domain superfamily NDN11_11195 IPR011302 Iron-binding protein IscA, proteobacteria NDN11_11200 IPR036386 HscB, C-terminal domain superfamily NDN11_11200 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain NDN11_11200 IPR004640 Co-chaperone Hsc20 NDN11_11200 IPR036869 Chaperone J-domain superfamily NDN11_11200 IPR001623 DnaJ domain NDN11_11205 IPR010236 ISC system FeS cluster assembly, HscA chaperone NDN11_11205 IPR018181 Heat shock protein 70, conserved site NDN11_11205 IPR042039 HscA chaperone, nucleotide-binding domain NDN11_11205 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily NDN11_11205 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily NDN11_11205 IPR013126 Heat shock protein 70 family NDN11_11210 IPR012675 Beta-grasp domain superfamily NDN11_11210 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NDN11_11210 IPR036010 2Fe-2S ferredoxin-like superfamily NDN11_11210 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria NDN11_11210 IPR018298 Adrenodoxin, iron-sulphur binding site NDN11_11210 IPR001055 Adrenodoxin NDN11_11220 IPR029787 Nucleotide cyclase NDN11_11220 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase NDN11_11230 IPR036101 CarD-like/TRCF domain superfamily NDN11_11230 IPR014001 Helicase superfamily 1/2, ATP-binding domain NDN11_11230 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_11230 IPR004576 Transcription-repair coupling factor NDN11_11230 IPR001650 Helicase, C-terminal NDN11_11230 IPR011545 DEAD/DEAH box helicase domain NDN11_11230 IPR003711 CarD-like/TRCF domain NDN11_11230 IPR037235 TRCF-like, C-terminal domain NDN11_11230 IPR005118 Transcription-repair-coupling factor, C-terminal domain NDN11_11230 IPR041471 UvrB, interaction domain NDN11_11245 IPR036390 Winged helix DNA-binding domain superfamily NDN11_11245 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_11245 IPR000847 Transcription regulator HTH, LysR NDN11_11245 IPR005119 LysR, substrate-binding NDN11_11250 IPR004730 Transaldolase type 1 NDN11_11250 IPR001585 Transaldolase/Fructose-6-phosphate aldolase NDN11_11250 IPR013785 Aldolase-type TIM barrel NDN11_11250 IPR018225 Transaldolase, active site NDN11_11255 IPR001123 Amino acid exporter protein, LeuE-type NDN11_11255 IPR004778 Homoserine/Threonine efflux protein NDN11_11260 IPR004711 Benzoate transporter NDN11_11265 IPR006153 Cation/H+ exchanger NDN11_11265 IPR004771 K+/H+ exchanger NDN11_11265 IPR038770 Sodium/solute symporter superfamily NDN11_11265 IPR036291 NAD(P)-binding domain superfamily NDN11_11265 IPR003148 Regulator of K+ conductance, N-terminal NDN11_11270 IPR003416 MgtC/SapB/SrpB/YhiD family NDN11_11290 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily NDN11_11290 IPR027268 Peptidase M4/M1, CTD superfamily NDN11_11290 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold NDN11_11290 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal NDN11_11290 IPR012779 Peptidase M1, alanyl aminopeptidase NDN11_11290 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase NDN11_11290 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily NDN11_11290 IPR042097 Aminopeptidase N-like , N-terminal NDN11_11290 IPR014782 Peptidase M1, membrane alanine aminopeptidase NDN11_11320 IPR029056 Ribokinase-like NDN11_11320 IPR000417 Hydroxyethylthiazole kinase NDN11_11325 IPR036259 MFS transporter superfamily NDN11_11325 IPR020846 Major facilitator superfamily domain NDN11_11325 IPR004747 Cyanate transport system protein NDN11_11325 IPR011701 Major facilitator superfamily NDN11_11330 IPR016192 APOBEC/CMP deaminase, zinc-binding NDN11_11330 IPR002125 Cytidine and deoxycytidylate deaminase domain NDN11_11330 IPR016193 Cytidine deaminase-like NDN11_11340 IPR000847 Transcription regulator HTH, LysR NDN11_11340 IPR005119 LysR, substrate-binding NDN11_11340 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain NDN11_11340 IPR036390 Winged helix DNA-binding domain superfamily NDN11_11340 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_11350 IPR029061 Thiamin diphosphate-binding fold NDN11_11350 IPR039368 Acetolactate synthase large subunit, TPP binding domain NDN11_11350 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain NDN11_11350 IPR000399 TPP-binding enzyme, conserved site NDN11_11350 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding NDN11_11350 IPR012846 Acetolactate synthase, large subunit, biosynthetic NDN11_11350 IPR029035 DHS-like NAD/FAD-binding domain superfamily NDN11_11350 IPR012000 Thiamine pyrophosphate enzyme, central domain NDN11_11355 IPR015590 Aldehyde dehydrogenase domain NDN11_11355 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_11355 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NDN11_11355 IPR016160 Aldehyde dehydrogenase, cysteine active site NDN11_11355 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_11355 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_11360 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding NDN11_11360 IPR002811 Aspartate dehydrogenase NDN11_11360 IPR020626 L-aspartate dehydrogenase, prokaryotic NDN11_11360 IPR011182 L-aspartate dehydrogenase NDN11_11360 IPR036291 NAD(P)-binding domain superfamily NDN11_11365 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_11365 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_11365 IPR036291 NAD(P)-binding domain superfamily NDN11_11370 IPR000639 Epoxide hydrolase-like NDN11_11370 IPR000073 Alpha/beta hydrolase fold-1 NDN11_11370 IPR029058 Alpha/Beta hydrolase fold NDN11_11380 IPR011701 Major facilitator superfamily NDN11_11380 IPR036259 MFS transporter superfamily NDN11_11380 IPR000849 Sugar phosphate transporter NDN11_11380 IPR020846 Major facilitator superfamily domain NDN11_11385 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily NDN11_11385 IPR023744 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin--NAD(+) reductase subunit NDN11_11385 IPR028202 Reductase, C-terminal NDN11_11385 IPR023753 FAD/NAD(P)-binding domain NDN11_11385 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_11390 IPR017626 2,3-dihydroxybiphenyl 1,2-dioxygenase NDN11_11390 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NDN11_11390 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NDN11_11390 IPR037523 Vicinal oxygen chelate (VOC) domain NDN11_11390 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II NDN11_11395 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_11395 IPR036291 NAD(P)-binding domain superfamily NDN11_11395 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_11400 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NDN11_11400 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NDN11_11410 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NDN11_11410 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NDN11_11415 IPR014757 Transcription regulator IclR, C-terminal NDN11_11415 IPR036390 Winged helix DNA-binding domain superfamily NDN11_11415 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_11415 IPR029016 GAF-like domain superfamily NDN11_11415 IPR005471 Transcription regulator IclR, N-terminal NDN11_11420 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_11420 IPR036291 NAD(P)-binding domain superfamily NDN11_11420 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_11435 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NDN11_11435 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NDN11_11435 IPR036390 Winged helix DNA-binding domain superfamily NDN11_11435 IPR019888 Transcription regulator AsnC-type NDN11_11435 IPR011991 ArsR-like helix-turn-helix domain NDN11_11435 IPR000485 AsnC-type HTH domain NDN11_11435 IPR011008 Dimeric alpha-beta barrel NDN11_11435 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_11440 IPR000620 EamA domain NDN11_11445 IPR036259 MFS transporter superfamily NDN11_11445 IPR020846 Major facilitator superfamily domain NDN11_11445 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family NDN11_11445 IPR011701 Major facilitator superfamily NDN11_11445 IPR005829 Sugar transporter, conserved site NDN11_11460 IPR010722 Biotin and thiamin synthesis-associated domain NDN11_11460 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB NDN11_11460 IPR024177 Biotin synthase NDN11_11460 IPR006638 Elp3/MiaB/NifB NDN11_11460 IPR007197 Radical SAM NDN11_11460 IPR013785 Aldolase-type TIM barrel NDN11_11465 IPR020845 AMP-binding, conserved site NDN11_11465 IPR000873 AMP-dependent synthetase/ligase NDN11_11465 IPR025110 AMP-binding enzyme, C-terminal domain NDN11_11470 IPR001647 DNA-binding HTH domain, TetR-type NDN11_11470 IPR009057 Homeobox-like domain superfamily NDN11_11475 IPR006089 Acyl-CoA dehydrogenase, conserved site NDN11_11475 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_11475 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_11475 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_11475 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_11475 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_11475 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NDN11_11480 IPR034733 Acetyl-CoA carboxylase NDN11_11480 IPR029045 ClpP/crotonase-like domain superfamily NDN11_11480 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal NDN11_11480 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal NDN11_11485 IPR029045 ClpP/crotonase-like domain superfamily NDN11_11485 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NDN11_11485 IPR001753 Enoyl-CoA hydratase/isomerase NDN11_11485 IPR014748 Enoyl-CoA hydratase, C-terminal NDN11_11490 IPR005482 Biotin carboxylase, C-terminal NDN11_11490 IPR016185 Pre-ATP-grasp domain superfamily NDN11_11490 IPR041265 Propionyl-coenzyme A carboxylase, BT domain NDN11_11490 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NDN11_11490 IPR000089 Biotin/lipoyl attachment NDN11_11490 IPR011053 Single hybrid motif NDN11_11490 IPR011054 Rudiment single hybrid motif NDN11_11490 IPR001882 Biotin-binding site NDN11_11490 IPR005481 Biotin carboxylase-like, N-terminal domain NDN11_11490 IPR013815 ATP-grasp fold, subdomain 1 NDN11_11490 IPR011761 ATP-grasp fold NDN11_11490 IPR011764 Biotin carboxylation domain NDN11_11495 IPR000891 Pyruvate carboxyltransferase NDN11_11495 IPR027167 Hydroxymethylglutaryl-CoA lyase NDN11_11495 IPR013785 Aldolase-type TIM barrel NDN11_11495 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site NDN11_11500 IPR036390 Winged helix DNA-binding domain superfamily NDN11_11500 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_11500 IPR000847 Transcription regulator HTH, LysR NDN11_11500 IPR005119 LysR, substrate-binding NDN11_11510 IPR009351 Protein of unknown function DUF1006 NDN11_11515 IPR018060 DNA binding HTH domain, AraC-type NDN11_11515 IPR003313 AraC-type arabinose-binding/dimerisation domain NDN11_11515 IPR009057 Homeobox-like domain superfamily NDN11_11515 IPR037923 Transcription regulator HTH-like NDN11_11515 IPR023699 Transcription activator HTH, RhaR NDN11_11515 IPR018062 HTH domain AraC-type, conserved site NDN11_11515 IPR014710 RmlC-like jelly roll fold NDN11_11515 IPR020449 Transcription regulator HTH, AraC- type NDN11_11520 IPR020846 Major facilitator superfamily domain NDN11_11520 IPR036259 MFS transporter superfamily NDN11_11520 IPR011701 Major facilitator superfamily NDN11_11525 IPR020846 Major facilitator superfamily domain NDN11_11525 IPR011701 Major facilitator superfamily NDN11_11525 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG NDN11_11525 IPR036259 MFS transporter superfamily NDN11_11525 IPR005829 Sugar transporter, conserved site NDN11_11545 IPR011701 Major facilitator superfamily NDN11_11545 IPR020846 Major facilitator superfamily domain NDN11_11545 IPR036259 MFS transporter superfamily NDN11_11550 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_11550 IPR036390 Winged helix DNA-binding domain superfamily NDN11_11550 IPR011991 ArsR-like helix-turn-helix domain NDN11_11550 IPR002577 Helix-turn-helix, HxlR type NDN11_11565 IPR001320 Ionotropic glutamate receptor NDN11_11565 IPR018313 Solute-binding protein family 3, conserved site NDN11_11565 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NDN11_11570 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NDN11_11570 IPR018313 Solute-binding protein family 3, conserved site NDN11_11575 IPR003593 AAA+ ATPase domain NDN11_11575 IPR003439 ABC transporter-like NDN11_11575 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type NDN11_11575 IPR017871 ABC transporter, conserved site NDN11_11575 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_11580 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain NDN11_11580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_11580 IPR035906 MetI-like superfamily NDN11_11585 IPR035906 MetI-like superfamily NDN11_11585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_11585 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain NDN11_11610 IPR004841 Amino acid permease/ SLC12A domain NDN11_11610 IPR004840 Amino acid permease, conserved site NDN11_11615 IPR020579 Exonuclease VII, large subunit, C-terminal NDN11_11615 IPR003753 Exonuclease VII, large subunit NDN11_11615 IPR025824 OB-fold nucleic acid binding domain NDN11_11625 IPR001853 DSBA-like thioredoxin domain NDN11_11625 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL NDN11_11625 IPR017937 Thioredoxin, conserved site NDN11_11625 IPR013766 Thioredoxin domain NDN11_11625 IPR036249 Thioredoxin-like superfamily NDN11_11630 IPR000917 Sulfatase, N-terminal NDN11_11630 IPR040423 Phosphoethanolamine transferase NDN11_11630 IPR012549 Phosphoethanolamine transferase, N-terminal NDN11_11630 IPR017850 Alkaline-phosphatase-like, core domain superfamily NDN11_11635 IPR003855 Potassium transporter NDN11_11635 IPR023051 Potassium uptake protein, low affinity, Kup NDN11_11650 IPR024072 Dihydrofolate reductase-like domain superfamily NDN11_11650 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal NDN11_11655 IPR005838 Type III secretion system inner membrane P protein NDN11_11655 IPR005837 Flagellar transport protein FliP NDN11_11665 IPR036429 SpoA-like superfamily NDN11_11665 IPR012826 Flagellar motor switch FliN NDN11_11665 IPR001543 Surface presentation of antigen (SpoA) NDN11_11665 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb NDN11_11675 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like NDN11_11675 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NDN11_11675 IPR019776 Flagellar basal body rod protein, conserved site NDN11_11675 IPR001444 Flagellar basal body rod protein, N-terminal NDN11_11675 IPR037058 Flagellar hook protein FlgE superfamily NDN11_11675 IPR011491 Flagellar hook protein FlgE NDN11_11675 IPR020013 Flagellar hook-basal body protein, FlgE/F/G NDN11_11680 IPR005648 Flagellar hook capping protein NDN11_11695 IPR003593 AAA+ ATPase domain NDN11_11695 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site NDN11_11695 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain NDN11_11695 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain NDN11_11695 IPR032463 ATPase, type III secretion system, FliI NDN11_11695 IPR005714 ATPase, type III secretion system, FliI/YscN NDN11_11695 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_11695 IPR040627 T3SS EscN ATPase, C-terminal NDN11_11695 IPR000225 Armadillo NDN11_11695 IPR022425 Flagellar export ATPase FliI, clade 2 NDN11_11710 IPR013556 Flagellar M-ring C-terminal NDN11_11710 IPR000067 Flagellar M-ring protein FliF NDN11_11710 IPR006182 Secretory protein YscJ/FliF NDN11_11715 IPR001624 Flagellar hook-basal body complex protein FliE NDN11_11720 IPR001444 Flagellar basal body rod protein, N-terminal NDN11_11720 IPR019776 Flagellar basal body rod protein, conserved site NDN11_11720 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NDN11_11720 IPR006299 Flagellar basal-body rod protein FlgC NDN11_11725 IPR001444 Flagellar basal body rod protein, N-terminal NDN11_11725 IPR019776 Flagellar basal body rod protein, conserved site NDN11_11725 IPR006300 Flagellar basal-body rod protein FlgB NDN11_11730 IPR001782 Flagellar P-ring protein NDN11_11735 IPR000527 Flagellar L-ring protein NDN11_11745 IPR019776 Flagellar basal body rod protein, conserved site NDN11_11745 IPR020013 Flagellar hook-basal body protein, FlgE/F/G NDN11_11745 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NDN11_11745 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like NDN11_11745 IPR012834 Flagellar basal-body rod FlgG NDN11_11745 IPR001444 Flagellar basal body rod protein, N-terminal NDN11_11755 IPR006301 Flagellar biosynthesis protein FlhA NDN11_11755 IPR025505 FHIPEP conserved site NDN11_11755 IPR001712 Type III secretion system FHIPEP NDN11_11755 IPR042194 FHIPEP, domain 1 NDN11_11755 IPR042193 FHIPEP, domain 3 NDN11_11755 IPR042196 FHIPEP, domain 4 NDN11_11760 IPR006136 Flagellar biosynthetic protein FlhB NDN11_11760 IPR029025 Type III secretion system substrate exporter, C-terminal NDN11_11760 IPR006135 Type III secretion system substrate exporter NDN11_11765 IPR006303 Flagellar biosynthesis protein FliR NDN11_11765 IPR002010 Type III secretion system inner membrane R protein NDN11_11770 IPR002191 Bacterial export protein family 3 NDN11_11770 IPR006305 Flagellar biosynthesis protein FliQ NDN11_11790 IPR036779 LysM domain superfamily NDN11_11790 IPR018392 LysM domain NDN11_11790 IPR000801 Putative esterase NDN11_11790 IPR029058 Alpha/Beta hydrolase fold NDN11_11800 IPR013785 Aldolase-type TIM barrel NDN11_11800 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_11800 IPR023753 FAD/NAD(P)-binding domain NDN11_11800 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NDN11_11805 IPR000620 EamA domain NDN11_11810 IPR036390 Winged helix DNA-binding domain superfamily NDN11_11810 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_11810 IPR000847 Transcription regulator HTH, LysR NDN11_11810 IPR005119 LysR, substrate-binding NDN11_11820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_11820 IPR018223 Argininosuccinate synthase, conserved site NDN11_11820 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail NDN11_11820 IPR023437 Argininosuccinate synthase, type 2 subfamily NDN11_11820 IPR001518 Argininosuccinate synthase NDN11_11820 IPR023434 Argininosuccinate synthase, type 1 subfamily NDN11_11820 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body NDN11_11825 IPR011051 RmlC-like cupin domain superfamily NDN11_11825 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain NDN11_11825 IPR003829 Pirin, N-terminal domain NDN11_11825 IPR012093 Pirin NDN11_11825 IPR014710 RmlC-like jelly roll fold NDN11_11855 IPR025403 Domain of unknown function DUF4129 NDN11_11855 IPR038765 Papain-like cysteine peptidase superfamily NDN11_11855 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal NDN11_11855 IPR002931 Transglutaminase-like NDN11_11865 IPR011703 ATPase, AAA-3 NDN11_11865 IPR041628 ChlI/MoxR, AAA lid domain NDN11_11865 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_11870 IPR007423 Selenoprotein, putative NDN11_11875 IPR003706 CstA, N-terminal domain NDN11_11875 IPR025299 CstA, C-terminal domain NDN11_11880 IPR015365 Elongation factor P, C-terminal NDN11_11880 IPR012340 Nucleic acid-binding, OB-fold NDN11_11880 IPR014722 Ribosomal protein L2, domain 2 NDN11_11880 IPR020599 Translation elongation factor P/YeiP NDN11_11880 IPR013185 Translation elongation factor, KOW-like NDN11_11880 IPR001059 Translation elongation factor P/YeiP, central NDN11_11880 IPR011768 Translation elongation factor P NDN11_11880 IPR008991 Translation protein SH3-like domain superfamily NDN11_11885 IPR007197 Radical SAM NDN11_11885 IPR022462 Lysine-2,3-aminomutase-like NDN11_11885 IPR013785 Aldolase-type TIM barrel NDN11_11885 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase NDN11_11900 IPR034704 L28p-like NDN11_11900 IPR002150 Ribosomal protein L31 NDN11_11900 IPR027491 Ribosomal protein L31 type A NDN11_11900 IPR042105 Ribosomal protein L31 superfamily NDN11_11905 IPR038770 Sodium/solute symporter superfamily NDN11_11905 IPR016833 Putative sodium bile acid cotransporter NDN11_11910 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NDN11_11910 IPR037523 Vicinal oxygen chelate (VOC) domain NDN11_11910 IPR018146 Glyoxalase I, conserved site NDN11_11910 IPR004361 Glyoxalase I NDN11_11910 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NDN11_11915 IPR036259 MFS transporter superfamily NDN11_11915 IPR020846 Major facilitator superfamily domain NDN11_11915 IPR011701 Major facilitator superfamily NDN11_11915 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 NDN11_11920 IPR041699 Lon protease, AAA domain NDN11_11920 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NDN11_11920 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_11920 IPR008269 Peptidase S16, Lon proteolytic domain NDN11_11920 IPR027065 Lon protease NDN11_11925 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_11925 IPR005119 LysR, substrate-binding NDN11_11925 IPR000847 Transcription regulator HTH, LysR NDN11_11925 IPR036390 Winged helix DNA-binding domain superfamily NDN11_11930 IPR036779 LysM domain superfamily NDN11_11930 IPR016047 Peptidase M23 NDN11_11930 IPR018392 LysM domain NDN11_11930 IPR011055 Duplicated hybrid motif NDN11_11935 IPR030048 Survival protein SurE NDN11_11935 IPR002828 Survival protein SurE-like phosphatase/nucleotidase NDN11_11935 IPR036523 SurE-like phosphatase/nucleotidase superfamily NDN11_11955 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal NDN11_11955 IPR012338 Beta-lactamase/transpeptidase-like NDN11_11955 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal NDN11_11955 IPR015956 Penicillin-binding protein, C-terminal domain superfamily NDN11_11955 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A NDN11_11955 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily NDN11_11960 IPR001451 Hexapeptide repeat NDN11_11960 IPR011004 Trimeric LpxA-like superfamily NDN11_11970 IPR020476 NUDIX hydrolase NDN11_11970 IPR015797 NUDIX hydrolase-like domain superfamily NDN11_11970 IPR020084 NUDIX hydrolase, conserved site NDN11_11970 IPR000086 NUDIX hydrolase domain NDN11_11970 IPR033713 Phosphatase NudJ NDN11_11975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_11975 IPR023382 Adenine nucleotide alpha hydrolase-like domains NDN11_11975 IPR004506 tRNA-specific 2-thiouridylase NDN11_11980 IPR035932 HflD-like superfamily NDN11_11980 IPR007451 High frequency lysogenization protein HflD NDN11_11985 IPR008948 L-Aspartase-like NDN11_11985 IPR024083 Fumarase/histidase, N-terminal NDN11_11985 IPR000362 Fumarate lyase family NDN11_11985 IPR013539 Adenylosuccinate lyase PurB, C-terminal NDN11_11985 IPR004769 Adenylosuccinate lyase NDN11_11985 IPR020557 Fumarate lyase, conserved site NDN11_11985 IPR022761 Fumarate lyase, N-terminal NDN11_12005 IPR018392 LysM domain NDN11_12005 IPR007921 CHAP domain NDN11_12005 IPR005877 YSIRK Gram-positive signal peptide NDN11_12005 IPR036779 LysM domain superfamily NDN11_12005 IPR038765 Papain-like cysteine peptidase superfamily NDN11_12015 IPR004840 Amino acid permease, conserved site NDN11_12015 IPR004841 Amino acid permease/ SLC12A domain NDN11_12020 IPR007041 Arginine N-succinyltransferase AstA/AruG NDN11_12020 IPR017650 Arginine N-succinyltransferase NDN11_12020 IPR016181 Acyl-CoA N-acyltransferase NDN11_12045 IPR008271 Serine/threonine-protein kinase, active site NDN11_12045 IPR017441 Protein kinase, ATP binding site NDN11_12045 IPR000719 Protein kinase domain NDN11_12045 IPR005543 PASTA domain NDN11_12045 IPR011009 Protein kinase-like domain superfamily NDN11_12080 IPR004779 Carboxylate/Amino Acid/Amine Transporter NDN11_12080 IPR000620 EamA domain NDN11_12105 IPR000905 Gcp-like domain NDN11_12105 IPR017861 Kae1/TsaD family NDN11_12105 IPR017860 Peptidase M22, conserved site NDN11_12105 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD NDN11_12110 IPR001911 Ribosomal protein S21 NDN11_12110 IPR038380 Ribosomal protein S21 superfamily NDN11_12110 IPR018278 Ribosomal protein S21, conserved site NDN11_12115 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 NDN11_12115 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like NDN11_12115 IPR042184 YqeY/Aim41, N-terminal domain NDN11_12115 IPR019004 Uncharacterised protein YqeY/Aim41 NDN11_12130 IPR016181 Acyl-CoA N-acyltransferase NDN11_12130 IPR000182 GNAT domain NDN11_12135 IPR001915 Peptidase M48 NDN11_12135 IPR030873 Beta-barrel assembly-enhancing protease NDN11_12135 IPR011990 Tetratricopeptide-like helical domain superfamily NDN11_12140 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase NDN11_12140 IPR002123 Phospholipid/glycerol acyltransferase NDN11_12145 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NDN11_12145 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain NDN11_12145 IPR023756 Glyoxylate/hydroxypyruvate reductase B NDN11_12145 IPR036291 NAD(P)-binding domain superfamily NDN11_12145 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NDN11_12155 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D NDN11_12155 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NDN11_12155 IPR001279 Metallo-beta-lactamase NDN11_12160 IPR036291 NAD(P)-binding domain superfamily NDN11_12165 IPR003680 Flavodoxin-like fold NDN11_12165 IPR029039 Flavoprotein-like superfamily NDN11_12165 IPR023048 NADH-azoreductase, FMN-dependent NDN11_12170 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_12170 IPR000847 Transcription regulator HTH, LysR NDN11_12170 IPR036390 Winged helix DNA-binding domain superfamily NDN11_12170 IPR005119 LysR, substrate-binding NDN11_12175 IPR036291 NAD(P)-binding domain superfamily NDN11_12175 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_12175 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_12180 IPR036291 NAD(P)-binding domain superfamily NDN11_12180 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_12180 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_12185 IPR029058 Alpha/Beta hydrolase fold NDN11_12185 IPR022742 Serine aminopeptidase, S33 NDN11_12190 IPR029058 Alpha/Beta hydrolase fold NDN11_12190 IPR022742 Serine aminopeptidase, S33 NDN11_12195 IPR009594 Transcription regulator HTH, AraC, N-terminal NDN11_12195 IPR018060 DNA binding HTH domain, AraC-type NDN11_12195 IPR009057 Homeobox-like domain superfamily NDN11_12200 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NDN11_12200 IPR013785 Aldolase-type TIM barrel NDN11_12205 IPR018060 DNA binding HTH domain, AraC-type NDN11_12205 IPR009057 Homeobox-like domain superfamily NDN11_12205 IPR009594 Transcription regulator HTH, AraC, N-terminal NDN11_12210 IPR036775 DNA polymerase, Y-family, little finger domain superfamily NDN11_12210 IPR017961 DNA polymerase, Y-family, little finger domain NDN11_12210 IPR025188 Domain of unknown function DUF4113 NDN11_12210 IPR001126 UmuC domain NDN11_12215 IPR039418 LexA-like NDN11_12215 IPR036286 LexA/Signal peptidase-like superfamily NDN11_12215 IPR006197 Peptidase S24, LexA-like NDN11_12215 IPR015927 Peptidase S24/S26A/S26B/S26C NDN11_12245 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_12245 IPR012910 TonB-dependent receptor, plug domain NDN11_12245 IPR039426 Vitamin B12 transporter BtuB-like NDN11_12245 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_12245 IPR010917 TonB-dependent receptor, conserved site NDN11_12245 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_12245 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor NDN11_12245 IPR011276 TonB-dependent haem/haemoglobin receptor NDN11_12255 IPR011054 Rudiment single hybrid motif NDN11_12255 IPR005481 Biotin carboxylase-like, N-terminal domain NDN11_12255 IPR005482 Biotin carboxylase, C-terminal NDN11_12255 IPR011764 Biotin carboxylation domain NDN11_12255 IPR001882 Biotin-binding site NDN11_12255 IPR011761 ATP-grasp fold NDN11_12255 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NDN11_12255 IPR016185 Pre-ATP-grasp domain superfamily NDN11_12255 IPR011053 Single hybrid motif NDN11_12255 IPR000089 Biotin/lipoyl attachment NDN11_12265 IPR038021 Putative hydro-lyase NDN11_12265 IPR009906 D-glutamate cyclase NDN11_12265 IPR016938 Uncharacterised protein family UPF0317 NDN11_12270 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel NDN11_12270 IPR005501 LamB/YcsF/PxpA-like NDN11_12275 IPR001046 NRAMP family NDN11_12280 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_12280 IPR036390 Winged helix DNA-binding domain superfamily NDN11_12280 IPR005119 LysR, substrate-binding NDN11_12280 IPR000847 Transcription regulator HTH, LysR NDN11_12290 IPR016169 FAD-binding, type PCMH, subdomain 2 NDN11_12290 IPR036318 FAD-binding, type PCMH-like superfamily NDN11_12290 IPR000644 CBS domain NDN11_12290 IPR005170 Transporter-associated domain NDN11_12290 IPR005496 Integral membrane protein TerC NDN11_12295 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_12295 IPR036187 DNA mismatch repair protein MutS, core domain superfamily NDN11_12295 IPR007695 DNA mismatch repair protein MutS-like, N-terminal NDN11_12295 IPR017261 DNA mismatch repair protein MutS/MSH NDN11_12295 IPR000432 DNA mismatch repair protein MutS, C-terminal NDN11_12295 IPR007861 DNA mismatch repair protein MutS, clamp NDN11_12295 IPR007696 DNA mismatch repair protein MutS, core NDN11_12295 IPR036678 MutS, connector domain superfamily NDN11_12295 IPR007860 DNA mismatch repair protein MutS, connector domain NDN11_12295 IPR005748 DNA mismatch repair protein MutS NDN11_12295 IPR016151 DNA mismatch repair protein MutS, N-terminal NDN11_12305 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NDN11_12305 IPR022569 Ferredoxin, C-terminal NDN11_12305 IPR000813 7Fe ferredoxin NDN11_12305 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NDN11_12315 IPR002935 Class I-like SAM-dependent O-methyltransferase NDN11_12315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_12325 IPR011004 Trimeric LpxA-like superfamily NDN11_12325 IPR018357 Hexapeptide transferase, conserved site NDN11_12325 IPR001451 Hexapeptide repeat NDN11_12330 IPR035647 EF-G domain III/V-like NDN11_12330 IPR023582 Impact family NDN11_12330 IPR001498 Impact, N-terminal NDN11_12330 IPR036956 Impact, N-terminal domain superfamily NDN11_12330 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_12330 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site NDN11_12335 IPR010129 Type I secretion membrane fusion protein, HlyD family NDN11_12335 IPR006144 Secretion protein HlyD, conserved site NDN11_12340 IPR003593 AAA+ ATPase domain NDN11_12340 IPR011527 ABC transporter type 1, transmembrane domain NDN11_12340 IPR036640 ABC transporter type 1, transmembrane domain superfamily NDN11_12340 IPR003439 ABC transporter-like NDN11_12340 IPR017871 ABC transporter, conserved site NDN11_12340 IPR010132 ATPase, type I secretion system, HlyB NDN11_12340 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_12340 IPR005074 Peptidase C39, bacteriocin processing NDN11_12340 IPR039395 Peptidase C39-like A NDN11_12340 IPR039421 Type I protein exporter NDN11_12345 IPR003423 Outer membrane efflux protein NDN11_12345 IPR010130 Type I secretion outer membrane protein, TolC NDN11_12350 IPR003439 ABC transporter-like NDN11_12350 IPR003593 AAA+ ATPase domain NDN11_12350 IPR017871 ABC transporter, conserved site NDN11_12350 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NDN11_12350 IPR030921 LPS export ABC transporter, ATP-binding protein LptB NDN11_12350 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_12355 IPR014340 Lipopolysaccharide export system protein LptA NDN11_12355 IPR005653 Organic solvent tolerance-like, N-terminal NDN11_12365 IPR036412 HAD-like superfamily NDN11_12365 IPR023214 HAD superfamily NDN11_12365 IPR010023 KdsC family NDN11_12370 IPR000644 CBS domain NDN11_12370 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type NDN11_12370 IPR001347 Sugar isomerase (SIS) NDN11_12370 IPR035474 KpsF-like, SIS domain NDN11_12380 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding NDN11_12380 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_12380 IPR032678 tRNA synthetases class I, catalytic domain NDN11_12380 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR NDN11_12380 IPR015803 Cysteine-tRNA ligase NDN11_12380 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase NDN11_12390 IPR000473 Ribosomal protein L36 NDN11_12390 IPR035977 Ribosomal protein L36 superfamily NDN11_12395 IPR007298 Copper resistance lipoprotein NlpE NDN11_12395 IPR033450 NlpE, C-terminal OB domain NDN11_12395 IPR038139 NlpE, C-terminal domain superfamily NDN11_12400 IPR009060 UBA-like superfamily NDN11_12400 IPR018101 Translation elongation factor Ts, conserved site NDN11_12400 IPR036402 Elongation factor Ts, dimerisation domain superfamily NDN11_12400 IPR001816 Translation elongation factor EFTs/EF1B NDN11_12400 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation NDN11_12405 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily NDN11_12405 IPR001865 Ribosomal protein S2 NDN11_12405 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid NDN11_12405 IPR018130 Ribosomal protein S2, conserved site NDN11_12410 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 NDN11_12410 IPR001714 Peptidase M24, methionine aminopeptidase NDN11_12410 IPR000994 Peptidase M24 NDN11_12410 IPR036005 Creatinase/aminopeptidase-like NDN11_12420 IPR020846 Major facilitator superfamily domain NDN11_12420 IPR011701 Major facilitator superfamily NDN11_12420 IPR036259 MFS transporter superfamily NDN11_12420 IPR004737 Nitrate transporter NDN11_12440 IPR041489 PDZ domain 6 NDN11_12440 IPR036034 PDZ superfamily NDN11_12440 IPR001478 PDZ domain NDN11_12440 IPR011782 Peptidase S1C, Do NDN11_12440 IPR009003 Peptidase S1, PA clan NDN11_12440 IPR001940 Peptidase S1C NDN11_12445 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily NDN11_12445 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 NDN11_12450 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily NDN11_12450 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily NDN11_12450 IPR019831 Manganese/iron superoxide dismutase, N-terminal NDN11_12450 IPR019832 Manganese/iron superoxide dismutase, C-terminal NDN11_12450 IPR019833 Manganese/iron superoxide dismutase, binding site NDN11_12450 IPR001189 Manganese/iron superoxide dismutase NDN11_12455 IPR001189 Manganese/iron superoxide dismutase NDN11_12455 IPR019831 Manganese/iron superoxide dismutase, N-terminal NDN11_12455 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily NDN11_12455 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily NDN11_12455 IPR019833 Manganese/iron superoxide dismutase, binding site NDN11_12455 IPR019832 Manganese/iron superoxide dismutase, C-terminal NDN11_12460 IPR040442 Pyruvate kinase-like domain superfamily NDN11_12460 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily NDN11_12460 IPR006254 Isocitrate lyase NDN11_12460 IPR039556 ICL/PEPM domain NDN11_12465 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_12465 IPR036390 Winged helix DNA-binding domain superfamily NDN11_12465 IPR005119 LysR, substrate-binding NDN11_12465 IPR000847 Transcription regulator HTH, LysR NDN11_12470 IPR005170 Transporter-associated domain NDN11_12470 IPR016169 FAD-binding, type PCMH, subdomain 2 NDN11_12470 IPR036318 FAD-binding, type PCMH-like superfamily NDN11_12470 IPR000644 CBS domain NDN11_12470 IPR002550 CNNM, transmembrane domain NDN11_12475 IPR000206 Ribosomal protein L7/L12 NDN11_12475 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NDN11_12475 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily NDN11_12475 IPR013823 Ribosomal protein L7/L12, C-terminal NDN11_12475 IPR008932 Ribosomal protein L7/L12, oligomerisation NDN11_12495 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain NDN11_12495 IPR031157 Tr-type G domain, conserved site NDN11_12495 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_12495 IPR005225 Small GTP-binding protein domain NDN11_12495 IPR011779 Sulphate adenylyltransferase, large subunit NDN11_12495 IPR000795 Transcription factor, GTP-binding domain NDN11_12495 IPR009000 Translation protein, beta-barrel domain superfamily NDN11_12495 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NDN11_12495 IPR002891 Adenylyl-sulfate kinase NDN11_12500 IPR011784 Sulphate adenylyltransferase, small subunit NDN11_12500 IPR002500 Phosphoadenosine phosphosulphate reductase NDN11_12500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_12505 IPR026950 Capsule assembly protein Wzi NDN11_12505 IPR038636 Capsule assembly protein Wzi superfamily NDN11_12515 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) NDN11_12515 IPR006195 Aminoacyl-tRNA synthetase, class II NDN11_12515 IPR002313 Lysine-tRNA ligase, class II NDN11_12515 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal NDN11_12515 IPR012340 Nucleic acid-binding, OB-fold NDN11_12515 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type NDN11_12525 IPR018527 Rubredoxin, iron-binding site NDN11_12525 IPR024922 Rubredoxin NDN11_12525 IPR024934 Rubredoxin-like domain NDN11_12525 IPR024935 Rubredoxin domain NDN11_12530 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_12530 IPR023753 FAD/NAD(P)-binding domain NDN11_12530 IPR041364 Rubredoxin binding domain NDN11_12535 IPR029058 Alpha/Beta hydrolase fold NDN11_12535 IPR000073 Alpha/beta hydrolase fold-1 NDN11_12540 IPR036390 Winged helix DNA-binding domain superfamily NDN11_12540 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_12540 IPR005119 LysR, substrate-binding NDN11_12540 IPR000847 Transcription regulator HTH, LysR NDN11_12545 IPR013785 Aldolase-type TIM barrel NDN11_12545 IPR035587 DUS-like, FMN-binding domain NDN11_12545 IPR032887 tRNA-dihydrouridine synthase B NDN11_12545 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal NDN11_12545 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 NDN11_12545 IPR001269 tRNA-dihydrouridine synthase NDN11_12545 IPR018517 tRNA-dihydrouridine synthase, conserved site NDN11_12550 IPR011673 Protein of unknown function DUF1615 NDN11_12560 IPR036393 Acetylglutamate kinase-like superfamily NDN11_12560 IPR001048 Aspartate/glutamate/uridylate kinase NDN11_12560 IPR041739 Glutamate-5-kinase domain NDN11_12560 IPR001057 Glutamate/acetylglutamate kinase NDN11_12560 IPR011529 Glutamate 5-kinase NDN11_12560 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase NDN11_12560 IPR019797 Glutamate 5-kinase, conserved site NDN11_12560 IPR002478 PUA domain NDN11_12560 IPR015947 PUA-like superfamily NDN11_12560 IPR036974 PUA domain superfamily NDN11_12565 IPR006074 GTP1/OBG, conserved site NDN11_12565 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_12565 IPR006073 GTP binding domain NDN11_12565 IPR036726 GTP1/OBG domain superfamily NDN11_12565 IPR006169 GTP1/OBG domain NDN11_12565 IPR035101 GTP-binding protein, Obg-type NDN11_12565 IPR014100 GTP-binding protein Obg/CgtA NDN11_12565 IPR031167 OBG-type guanine nucleotide-binding (G) domain NDN11_12585 IPR036291 NAD(P)-binding domain superfamily NDN11_12585 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family NDN11_12585 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site NDN11_12585 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain NDN11_12585 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain NDN11_12585 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I NDN11_12595 IPR004626 RarD protein NDN11_12605 IPR041471 UvrB, interaction domain NDN11_12605 IPR036876 UVR domain superfamily NDN11_12605 IPR004807 UvrABC system, subunit B NDN11_12605 IPR024759 UvrB, YAD/RRR-motif-containing domain NDN11_12605 IPR001943 UVR domain NDN11_12605 IPR006935 Helicase/UvrB, N-terminal NDN11_12605 IPR001650 Helicase, C-terminal NDN11_12605 IPR014001 Helicase superfamily 1/2, ATP-binding domain NDN11_12605 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_12620 IPR004839 Aminotransferase, class I/classII NDN11_12620 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site NDN11_12620 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_12620 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_12620 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_12665 IPR006370 4-hydroxybenzoate polyprenyltransferase-like NDN11_12665 IPR039653 Prenyltransferase NDN11_12665 IPR000537 UbiA prenyltransferase family NDN11_12670 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily NDN11_12670 IPR007440 Chorismate--pyruvate lyase NDN11_12675 IPR008147 Glutamine synthetase, beta-Grasp domain NDN11_12675 IPR036651 Glutamine synthetase, N-terminal domain superfamily NDN11_12675 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain NDN11_12675 IPR008146 Glutamine synthetase, catalytic domain NDN11_12675 IPR027303 Glutamine synthetase, glycine-rich site NDN11_12675 IPR004809 Glutamine synthetase type I NDN11_12675 IPR001637 Glutamine synthetase class-I, adenylation site NDN11_12675 IPR027302 Glutamine synthetase, N-terminal conserved site NDN11_12680 IPR017926 Glutamine amidotransferase NDN11_12680 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain NDN11_12680 IPR029062 Class I glutamine amidotransferase-like NDN11_12685 IPR001991 Sodium:dicarboxylate symporter NDN11_12685 IPR036458 Sodium:dicarboxylate symporter superfamily NDN11_12695 IPR010916 TonB box, conserved site NDN11_12695 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_12695 IPR010101 TonB-dependent vitamin B12 transporter BtuB NDN11_12695 IPR010917 TonB-dependent receptor, conserved site NDN11_12695 IPR012910 TonB-dependent receptor, plug domain NDN11_12695 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_12695 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_12695 IPR039426 Vitamin B12 transporter BtuB-like NDN11_12700 IPR005940 Anthranilate phosphoribosyl transferase NDN11_12700 IPR000312 Glycosyl transferase, family 3 NDN11_12700 IPR017459 Glycosyl transferase family 3, N-terminal domain NDN11_12700 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily NDN11_12700 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily NDN11_12705 IPR011060 Ribulose-phosphate binding barrel NDN11_12705 IPR001468 Indole-3-glycerol phosphate synthase, conserved site NDN11_12705 IPR013798 Indole-3-glycerol phosphate synthase NDN11_12705 IPR013785 Aldolase-type TIM barrel NDN11_12720 IPR001474 GTP cyclohydrolase I NDN11_12720 IPR018234 GTP cyclohydrolase I, conserved site NDN11_12720 IPR020602 GTP cyclohydrolase I domain NDN11_12740 IPR008535 Protein of unknown function DUF817 NDN11_12745 IPR000257 Uroporphyrinogen decarboxylase (URO-D) NDN11_12745 IPR006361 Uroporphyrinogen decarboxylase HemE NDN11_12745 IPR038071 UROD/MetE-like superfamily NDN11_12755 IPR029787 Nucleotide cyclase NDN11_12755 IPR000160 GGDEF domain NDN11_12755 IPR029016 GAF-like domain superfamily NDN11_12755 IPR003018 GAF domain NDN11_12755 IPR035919 EAL domain superfamily NDN11_12755 IPR001633 EAL domain NDN11_12755 IPR013515 Phytochrome, central region NDN11_12755 IPR016132 Phytochrome chromophore attachment domain NDN11_12755 IPR001294 Phytochrome NDN11_12760 IPR032466 Metal-dependent hydrolase NDN11_12760 IPR002195 Dihydroorotase, conserved site NDN11_12760 IPR004721 Dihydroorotase homodimeric type NDN11_12760 IPR006680 Amidohydrolase-related NDN11_12765 IPR005987 Ribonuclease T NDN11_12765 IPR013520 Exonuclease, RNase T/DNA polymerase III NDN11_12765 IPR036397 Ribonuclease H superfamily NDN11_12765 IPR012337 Ribonuclease H-like superfamily NDN11_12775 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal NDN11_12775 IPR023753 FAD/NAD(P)-binding domain NDN11_12775 IPR013785 Aldolase-type TIM barrel NDN11_12775 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_12780 IPR003593 AAA+ ATPase domain NDN11_12780 IPR017871 ABC transporter, conserved site NDN11_12780 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal NDN11_12780 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_12780 IPR003439 ABC transporter-like NDN11_12785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_12785 IPR035906 MetI-like superfamily NDN11_12785 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NDN11_12790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_12790 IPR035906 MetI-like superfamily NDN11_12795 IPR039424 Solute-binding protein family 5 NDN11_12795 IPR000914 Solute-binding protein family 5 domain NDN11_12795 IPR030678 Peptide/nickel binding protein, MppA-type NDN11_12800 IPR023346 Lysozyme-like domain superfamily NDN11_12800 IPR018392 LysM domain NDN11_12800 IPR000189 Prokaryotic transglycosylase, active site NDN11_12800 IPR008258 Transglycosylase SLT domain 1 NDN11_12800 IPR036779 LysM domain superfamily NDN11_12805 IPR012337 Ribonuclease H-like superfamily NDN11_12805 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain NDN11_12805 IPR006309 DNA polymerase 3, epsilon subunit NDN11_12805 IPR013520 Exonuclease, RNase T/DNA polymerase III NDN11_12805 IPR036397 Ribonuclease H superfamily NDN11_12815 IPR022925 NADH pyrophosphatase NudC NDN11_12815 IPR000086 NUDIX hydrolase domain NDN11_12815 IPR020084 NUDIX hydrolase, conserved site NDN11_12815 IPR015376 Zinc ribbon, NADH pyrophosphatase NDN11_12815 IPR015797 NUDIX hydrolase-like domain superfamily NDN11_12835 IPR007055 BON domain NDN11_12835 IPR014004 Transport-associated and nodulation domain, bacteria NDN11_12840 IPR003509 Uncharacterised protein family UPF0102 NDN11_12840 IPR011856 tRNA endonuclease-like domain superfamily NDN11_12840 IPR011335 Restriction endonuclease type II-like NDN11_12850 IPR000878 Tetrapyrrole methylase NDN11_12850 IPR035996 Tetrapyrrole methylase superfamily NDN11_12850 IPR014777 Tetrapyrrole methylase, subdomain 1 NDN11_12850 IPR014776 Tetrapyrrole methylase, subdomain 2 NDN11_12850 IPR018063 SAM-dependent methyltransferase RsmI, conserved site NDN11_12850 IPR008189 rRNA small subunit methyltransferase I NDN11_12860 IPR011794 Hg(II)-responsive transcriptional regulator NDN11_12860 IPR000551 MerR-type HTH domain NDN11_12860 IPR009061 Putative DNA-binding domain superfamily NDN11_12870 IPR002938 FAD-binding domain NDN11_12870 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_12870 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site NDN11_12870 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 NDN11_12875 IPR002938 FAD-binding domain NDN11_12875 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_12875 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site NDN11_12875 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase NDN11_12875 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 NDN11_12885 IPR007865 Aminopeptidase P, N-terminal NDN11_12885 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal NDN11_12885 IPR000994 Peptidase M24 NDN11_12885 IPR001714 Peptidase M24, methionine aminopeptidase NDN11_12885 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site NDN11_12885 IPR036005 Creatinase/aminopeptidase-like NDN11_12890 IPR011978 Uncharacterised protein family UPF0149 NDN11_12890 IPR036255 YgfB-like superfamily NDN11_12915 IPR038404 TRAP transporter solute receptor DctP superfamily NDN11_12925 IPR037873 BamE-like NDN11_12925 IPR007450 Lipoprotein SmpA/OmlA NDN11_12925 IPR006664 Outer membrane protein, bacterial NDN11_12925 IPR006665 OmpA-like domain NDN11_12925 IPR036737 OmpA-like domain superfamily NDN11_12930 IPR008640 Head domain of trimeric autotransporter adhesin NDN11_12930 IPR024973 ESPR domain NDN11_12930 IPR011049 Serralysin-like metalloprotease, C-terminal NDN11_12930 IPR005594 YadA-like, C-terminal NDN11_12930 IPR008640 Head domain of trimeric autotransporter adhesin NDN11_12930 IPR008635 Coiled stalk of trimeric autotransporter adhesin NDN11_12930 IPR024973 ESPR domain NDN11_12930 IPR011049 Serralysin-like metalloprotease, C-terminal NDN11_12930 IPR008635 Coiled stalk of trimeric autotransporter adhesin NDN11_12930 IPR005594 YadA-like, C-terminal NDN11_12935 IPR006665 OmpA-like domain NDN11_12935 IPR006664 Outer membrane protein, bacterial NDN11_12935 IPR007450 Lipoprotein SmpA/OmlA NDN11_12935 IPR037873 BamE-like NDN11_12935 IPR036737 OmpA-like domain superfamily NDN11_12940 IPR011049 Serralysin-like metalloprotease, C-terminal NDN11_12940 IPR024973 ESPR domain NDN11_12940 IPR008635 Coiled stalk of trimeric autotransporter adhesin NDN11_12940 IPR005594 YadA-like, C-terminal NDN11_12940 IPR008640 Head domain of trimeric autotransporter adhesin NDN11_12945 IPR002698 5-formyltetrahydrofolate cyclo-ligase NDN11_12945 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily NDN11_12945 IPR037171 NagB/RpiA transferase-like NDN11_12950 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_12950 IPR015947 PUA-like superfamily NDN11_12950 IPR008268 Peptidase S16, active site NDN11_12950 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_12950 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NDN11_12950 IPR027065 Lon protease NDN11_12950 IPR003111 Lon, substrate-binding domain NDN11_12950 IPR003593 AAA+ ATPase domain NDN11_12950 IPR008269 Peptidase S16, Lon proteolytic domain NDN11_12950 IPR027543 Lon protease, bacterial NDN11_12950 IPR004815 Lon protease, bacterial/eukaryotic-type NDN11_12950 IPR003959 ATPase, AAA-type, core NDN11_12955 IPR029028 Alpha/beta knot methyltransferases NDN11_12955 IPR003742 RNA methyltransferase RlmH NDN11_12955 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NDN11_12960 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type NDN11_12960 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B NDN11_12970 IPR033922 NAD(P) binding domain of glutamate dehydrogenase NDN11_12970 IPR036291 NAD(P)-binding domain superfamily NDN11_12970 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal NDN11_12970 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain NDN11_12970 IPR033524 Leu/Phe/Val dehydrogenases active site NDN11_12970 IPR014362 Glutamate dehydrogenase NDN11_12970 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase NDN11_12975 IPR007202 4Fe-4S domain NDN11_12975 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NDN11_12975 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NDN11_12975 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB NDN11_12975 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria NDN11_12975 IPR011005 Dihydropteroate synthase-like NDN11_12980 IPR011257 DNA glycosylase NDN11_12980 IPR004036 Endonuclease III-like, conserved site-2 NDN11_12980 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif NDN11_12980 IPR004035 Endonuclease III, iron-sulphur binding site NDN11_12980 IPR003265 HhH-GPD domain NDN11_12980 IPR000445 Helix-hairpin-helix motif NDN11_12980 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal NDN11_12980 IPR005759 Endonuclease III NDN11_12990 IPR006259 Adenylate kinase subfamily NDN11_12990 IPR000850 Adenylate kinase/UMP-CMP kinase NDN11_12990 IPR033690 Adenylate kinase, conserved site NDN11_12990 IPR007862 Adenylate kinase, active site lid domain NDN11_12990 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_13005 IPR017790 Penicillin-binding protein 2 NDN11_13005 IPR036138 Penicillin-binding protein, dimerisation domain superfamily NDN11_13005 IPR005311 Penicillin-binding protein, dimerisation domain NDN11_13005 IPR012338 Beta-lactamase/transpeptidase-like NDN11_13005 IPR001460 Penicillin-binding protein, transpeptidase NDN11_13010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_13010 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NDN11_13010 IPR004398 RNA methyltransferase, RsmD NDN11_13030 IPR011266 Fibrinogen-binding domain 2 NDN11_13030 IPR008966 Adhesion domain superfamily NDN11_13030 IPR011252 Fibrogen-binding domain 1 NDN11_13030 IPR019948 Gram-positive LPXTG cell wall anchor NDN11_13030 IPR013783 Immunoglobulin-like fold NDN11_13030 IPR019931 LPXTG cell wall anchor domain NDN11_13030 IPR033764 SD-repeat containing protein, B domain NDN11_13030 IPR041171 SDR-like Ig domain NDN11_13030 IPR005877 YSIRK Gram-positive signal peptide NDN11_13035 IPR029045 ClpP/crotonase-like domain superfamily NDN11_13035 IPR002142 Peptidase S49 NDN11_13035 IPR013703 Peptidase S49, N-terminal proteobacteria NDN11_13040 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_13040 IPR005670 Phosphate transport system permease protein 1 NDN11_13040 IPR017871 ABC transporter, conserved site NDN11_13040 IPR003593 AAA+ ATPase domain NDN11_13040 IPR003439 ABC transporter-like NDN11_13040 IPR015850 ABC transporter, phosphate import, PstB NDN11_13045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_13045 IPR035906 MetI-like superfamily NDN11_13045 IPR005672 Phosphate transport system permease protein PstA NDN11_13050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_13050 IPR035906 MetI-like superfamily NDN11_13050 IPR011864 Phosphate ABC transporter, permease protein PstC NDN11_13055 IPR024370 PBP domain NDN11_13055 IPR011862 Phosphate binding protein NDN11_13070 IPR004840 Amino acid permease, conserved site NDN11_13070 IPR004841 Amino acid permease/ SLC12A domain NDN11_13075 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding NDN11_13075 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain NDN11_13075 IPR000399 TPP-binding enzyme, conserved site NDN11_13075 IPR012000 Thiamine pyrophosphate enzyme, central domain NDN11_13075 IPR029035 DHS-like NAD/FAD-binding domain superfamily NDN11_13075 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme NDN11_13075 IPR029061 Thiamin diphosphate-binding fold NDN11_13080 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_13080 IPR036390 Winged helix DNA-binding domain superfamily NDN11_13080 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NDN11_13080 IPR019888 Transcription regulator AsnC-type NDN11_13080 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NDN11_13080 IPR011991 ArsR-like helix-turn-helix domain NDN11_13080 IPR000485 AsnC-type HTH domain NDN11_13080 IPR011008 Dimeric alpha-beta barrel NDN11_13085 IPR015590 Aldehyde dehydrogenase domain NDN11_13085 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent NDN11_13085 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NDN11_13085 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_13085 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_13085 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_13090 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site NDN11_13090 IPR017941 Rieske [2Fe-2S] iron-sulphur domain NDN11_13090 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily NDN11_13095 IPR002129 Pyridoxal phosphate-dependent decarboxylase NDN11_13095 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_13095 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_13095 IPR021115 Pyridoxal-phosphate binding site NDN11_13100 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_13100 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_13100 IPR004637 2,4-diaminobutyrate 4-transaminase NDN11_13100 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_13100 IPR005814 Aminotransferase class-III NDN11_13110 IPR010916 TonB box, conserved site NDN11_13110 IPR010105 TonB-dependent siderophore receptor NDN11_13110 IPR010917 TonB-dependent receptor, conserved site NDN11_13110 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_13110 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_13110 IPR011662 Secretin/TonB, short N-terminal domain NDN11_13110 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_13110 IPR012910 TonB-dependent receptor, plug domain NDN11_13115 IPR012910 TonB-dependent receptor, plug domain NDN11_13115 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_13115 IPR011662 Secretin/TonB, short N-terminal domain NDN11_13115 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_13115 IPR010916 TonB box, conserved site NDN11_13115 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_13115 IPR010917 TonB-dependent receptor, conserved site NDN11_13115 IPR010105 TonB-dependent siderophore receptor NDN11_13135 IPR005804 Fatty acid desaturase domain NDN11_13140 IPR017938 Riboflavin synthase-like beta-barrel NDN11_13140 IPR012675 Beta-grasp domain superfamily NDN11_13140 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NDN11_13140 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase NDN11_13140 IPR017927 FAD-binding domain, ferredoxin reductase-type NDN11_13140 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain NDN11_13140 IPR036010 2Fe-2S ferredoxin-like superfamily NDN11_13140 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NDN11_13140 IPR001433 Oxidoreductase FAD/NAD(P)-binding NDN11_13145 IPR009057 Homeobox-like domain superfamily NDN11_13145 IPR001647 DNA-binding HTH domain, TetR-type NDN11_13145 IPR023764 Transcriptional repressor HTH, FabR NDN11_13155 IPR012347 Ferritin-like NDN11_13155 IPR002177 DNA-binding protein Dps NDN11_13155 IPR023188 DNA-binding protein Dps, conserved site NDN11_13155 IPR023067 DNA protection during starvation protein, gammaproteobacteria NDN11_13155 IPR009078 Ferritin-like superfamily NDN11_13155 IPR008331 Ferritin/DPS protein domain NDN11_13160 IPR023949 RNA polymerase-associated protein RapA NDN11_13160 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_13160 IPR022737 RNA polymerase recycling, bacterial, C-terminal NDN11_13160 IPR038718 SNF2-like, N-terminal domain superfamily NDN11_13160 IPR000330 SNF2-related, N-terminal domain NDN11_13160 IPR040765 RapA, N-terminal Tudor like domain 1 NDN11_13160 IPR040766 RapA, N-terminal Tudor-like domain 2 NDN11_13160 IPR001650 Helicase, C-terminal NDN11_13160 IPR014001 Helicase superfamily 1/2, ATP-binding domain NDN11_13165 IPR020103 Pseudouridine synthase, catalytic domain superfamily NDN11_13165 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NDN11_13165 IPR006145 Pseudouridine synthase, RsuA/RluA NDN11_13175 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_13175 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_13175 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase NDN11_13175 IPR005814 Aminotransferase class-III NDN11_13175 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_13180 IPR013785 Aldolase-type TIM barrel NDN11_13180 IPR034291 Thiamine phosphate synthase NDN11_13180 IPR022998 Thiamine phosphate synthase/TenI NDN11_13180 IPR036206 Thiamin phosphate synthase superfamily NDN11_13190 IPR033469 CYTH-like domain superfamily NDN11_13190 IPR023577 CYTH domain NDN11_13190 IPR039013 Inorganic triphosphatase YgiF NDN11_13190 IPR007899 CHAD domain NDN11_13205 IPR011765 Peptidase M16, N-terminal NDN11_13205 IPR001431 Peptidase M16, zinc-binding site NDN11_13205 IPR007863 Peptidase M16, C-terminal NDN11_13205 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like NDN11_13210 IPR003719 Phenazine biosynthesis PhzF protein NDN11_13230 IPR024084 Isopropylmalate dehydrogenase-like domain NDN11_13230 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site NDN11_13230 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic NDN11_13235 IPR006145 Pseudouridine synthase, RsuA/RluA NDN11_13235 IPR020103 Pseudouridine synthase, catalytic domain superfamily NDN11_13235 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site NDN11_13235 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F NDN11_13235 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain NDN11_13245 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric NDN11_13250 IPR003660 HAMP domain NDN11_13250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_13250 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_13250 IPR006290 Heavy metal sensor kinase NDN11_13250 IPR005467 Histidine kinase domain NDN11_13250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_13250 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_13250 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_13255 IPR001867 OmpR/PhoB-type DNA-binding domain NDN11_13255 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response NDN11_13255 IPR001789 Signal transduction response regulator, receiver domain NDN11_13255 IPR039420 Transcriptional regulatory protein WalR-like NDN11_13255 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_13255 IPR011006 CheY-like superfamily NDN11_13265 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily NDN11_13265 IPR023419 Transthyretin, conserved site NDN11_13265 IPR023416 Transthyretin/hydroxyisourate hydrolase domain NDN11_13265 IPR014306 Hydroxyisourate hydrolase NDN11_13265 IPR000895 Transthyretin/hydroxyisourate hydrolase NDN11_13265 IPR023418 Transthyretin, thyroxine binding site NDN11_13275 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A NDN11_13275 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal NDN11_13275 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily NDN11_13275 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal NDN11_13275 IPR012338 Beta-lactamase/transpeptidase-like NDN11_13275 IPR015956 Penicillin-binding protein, C-terminal domain superfamily NDN11_13280 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_13280 IPR023753 FAD/NAD(P)-binding domain NDN11_13285 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain NDN11_13290 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily NDN11_13290 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily NDN11_13290 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain NDN11_13290 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal NDN11_13290 IPR006050 DNA photolyase, N-terminal NDN11_13290 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_13290 IPR002081 Cryptochrome/DNA photolyase class 1 NDN11_13305 IPR029044 Nucleotide-diphospho-sugar transferases NDN11_13320 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain NDN11_13320 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like NDN11_13335 IPR013785 Aldolase-type TIM barrel NDN11_13335 IPR004136 Nitronate monooxygenase NDN11_13340 IPR003414 Polyphosphate kinase NDN11_13340 IPR041108 Polyphosphate kinase, C-terminal domain 1 NDN11_13340 IPR024953 Polyphosphate kinase middle domain NDN11_13340 IPR036830 Polyphosphate kinase middle domain superfamily NDN11_13340 IPR025200 Polyphosphate kinase C-terminal domain 2 NDN11_13340 IPR025198 Polyphosphate kinase N-terminal domain NDN11_13340 IPR036832 Polyphosphate kinase N-terminal domain superfamily NDN11_13345 IPR036950 Penicillin binding protein transglycosylase domain NDN11_13345 IPR011812 Biosynthetic peptidoglycan transglycosylase NDN11_13345 IPR001264 Glycosyl transferase, family 51 NDN11_13345 IPR023346 Lysozyme-like domain superfamily NDN11_13350 IPR022764 Peptidase S54, rhomboid domain NDN11_13350 IPR035952 Rhomboid-like superfamily NDN11_13360 IPR030148 Catecholate siderophore receptor Fiu NDN11_13360 IPR012910 TonB-dependent receptor, plug domain NDN11_13360 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_13360 IPR039423 TonB-dependent receptor-like NDN11_13360 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_13360 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_13360 IPR010105 TonB-dependent siderophore receptor NDN11_13360 IPR010916 TonB box, conserved site NDN11_13365 IPR001867 OmpR/PhoB-type DNA-binding domain NDN11_13365 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_13365 IPR039420 Transcriptional regulatory protein WalR-like NDN11_13365 IPR001789 Signal transduction response regulator, receiver domain NDN11_13365 IPR011006 CheY-like superfamily NDN11_13370 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_13370 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR NDN11_13370 IPR013767 PAS fold NDN11_13370 IPR035965 PAS domain superfamily NDN11_13370 IPR000014 PAS domain NDN11_13370 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_13370 IPR005467 Histidine kinase domain NDN11_13370 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_13370 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_13370 IPR021766 Phosphate regulon sensor protein PhoR NDN11_13370 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_13375 IPR038766 Membrane component of ABC transporter, predicted NDN11_13380 IPR017871 ABC transporter, conserved site NDN11_13380 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_13380 IPR003439 ABC transporter-like NDN11_13380 IPR003593 AAA+ ATPase domain NDN11_13385 IPR013830 SGNH hydrolase-type esterase domain NDN11_13385 IPR036514 SGNH hydrolase superfamily NDN11_13390 IPR016181 Acyl-CoA N-acyltransferase NDN11_13390 IPR024170 Aminoglycoside N6-acetyltransferase NDN11_13390 IPR000182 GNAT domain NDN11_13395 IPR001765 Carbonic anhydrase NDN11_13395 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site NDN11_13395 IPR036874 Carbonic anhydrase superfamily NDN11_13400 IPR029058 Alpha/Beta hydrolase fold NDN11_13400 IPR000073 Alpha/beta hydrolase fold-1 NDN11_13400 IPR000639 Epoxide hydrolase-like NDN11_13410 IPR010917 TonB-dependent receptor, conserved site NDN11_13410 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_13410 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_13410 IPR010916 TonB box, conserved site NDN11_13410 IPR012910 TonB-dependent receptor, plug domain NDN11_13410 IPR039426 Vitamin B12 transporter BtuB-like NDN11_13410 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_13415 IPR017726 Fe/S biogenesis protein NfuA NDN11_13415 IPR000361 FeS cluster biogenesis NDN11_13415 IPR034904 Fe-S cluster assembly domain superfamily NDN11_13415 IPR035903 HesB-like domain superfamily NDN11_13415 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal NDN11_13425 IPR017850 Alkaline-phosphatase-like, core domain superfamily NDN11_13425 IPR024607 Sulfatase, conserved site NDN11_13425 IPR000917 Sulfatase, N-terminal NDN11_13430 IPR016187 C-type lectin fold NDN11_13430 IPR005532 Sulfatase-modifying factor enzyme NDN11_13430 IPR042095 Sulfatase-modifying factor enzyme superfamily NDN11_13440 IPR006195 Aminoacyl-tRNA synthetase, class II NDN11_13440 IPR004525 Elongation factor P--(R)-beta-lysine ligase NDN11_13440 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) NDN11_13440 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal NDN11_13445 IPR036291 NAD(P)-binding domain superfamily NDN11_13445 IPR038251 PdxB, dimerisation domain superfamily NDN11_13445 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain NDN11_13445 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain NDN11_13445 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NDN11_13445 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NDN11_13445 IPR020921 Erythronate-4-phosphate dehydrogenase NDN11_13450 IPR033718 Diacylglycerol kinase, prokaryotic NDN11_13450 IPR000829 DAGK family NDN11_13450 IPR036945 Diacylglycerol kinase (DAGK) superfamily NDN11_13460 IPR027409 GroEL-like apical domain superfamily NDN11_13460 IPR001844 Chaperonin Cpn60 NDN11_13460 IPR027410 TCP-1-like chaperonin intermediate domain superfamily NDN11_13460 IPR027413 GroEL-like equatorial domain superfamily NDN11_13460 IPR018370 Chaperonin Cpn60, conserved site NDN11_13460 IPR002423 Chaperonin Cpn60/TCP-1 family NDN11_13465 IPR020818 GroES chaperonin family NDN11_13465 IPR037124 GroES chaperonin superfamily NDN11_13465 IPR018369 Chaperonin GroES, conserved site NDN11_13465 IPR011032 GroES-like superfamily NDN11_13475 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal NDN11_13475 IPR001206 Diacylglycerol kinase, catalytic domain NDN11_13475 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily NDN11_13480 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site NDN11_13480 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal NDN11_13480 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising NDN11_13480 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain NDN11_13480 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal NDN11_13480 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal NDN11_13485 IPR010917 TonB-dependent receptor, conserved site NDN11_13485 IPR011662 Secretin/TonB, short N-terminal domain NDN11_13485 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_13485 IPR010105 TonB-dependent siderophore receptor NDN11_13485 IPR010916 TonB box, conserved site NDN11_13485 IPR012910 TonB-dependent receptor, plug domain NDN11_13485 IPR039423 TonB-dependent receptor-like NDN11_13485 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_13485 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_13490 IPR031656 Alpha-glycerophosphate oxidase, C-terminal NDN11_13490 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily NDN11_13490 IPR006076 FAD dependent oxidoreductase NDN11_13490 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_13490 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase NDN11_13495 IPR036390 Winged helix DNA-binding domain superfamily NDN11_13495 IPR014036 DeoR C-terminal sensor domain NDN11_13495 IPR001034 DeoR-type HTH domain NDN11_13495 IPR037171 NagB/RpiA transferase-like NDN11_13495 IPR018356 Transcription regulator, HTH DeoR-type, conserved site NDN11_13495 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_13500 IPR005999 Glycerol kinase NDN11_13500 IPR018484 Carbohydrate kinase, FGGY, N-terminal NDN11_13500 IPR018483 Carbohydrate kinase, FGGY, conserved site NDN11_13500 IPR000577 Carbohydrate kinase, FGGY NDN11_13500 IPR018485 Carbohydrate kinase, FGGY, C-terminal NDN11_13510 IPR016181 Acyl-CoA N-acyltransferase NDN11_13510 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase NDN11_13515 IPR004498 Ribosomal protein L11 methyltransferase NDN11_13515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_13520 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site NDN11_13520 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NDN11_13520 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase NDN11_13520 IPR036291 NAD(P)-binding domain superfamily NDN11_13520 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NDN11_13535 IPR038607 PhoD-like superfamily NDN11_13535 IPR032093 Phospholipase D, N-terminal NDN11_13535 IPR008963 Purple acid phosphatase-like, N-terminal NDN11_13535 IPR006311 Twin-arginine translocation pathway, signal sequence NDN11_13535 IPR018946 Alkaline phosphatase D-related NDN11_13550 IPR001173 Glycosyltransferase 2-like NDN11_13550 IPR029044 Nucleotide-diphospho-sugar transferases NDN11_13550 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA NDN11_13555 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal NDN11_13555 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB NDN11_13555 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel NDN11_13555 IPR002509 NodB homology domain NDN11_13565 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain NDN11_13570 IPR011335 Restriction endonuclease type II-like NDN11_13570 IPR009822 YaeQ NDN11_13570 IPR038590 YaeQ superfamily NDN11_13575 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NDN11_13575 IPR003495 CobW/HypB/UreG, nucleotide-binding domain NDN11_13575 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_13585 IPR006683 Thioesterase domain NDN11_13585 IPR029069 HotDog domain superfamily NDN11_13585 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase NDN11_13585 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain NDN11_13605 IPR017685 HTH-type transcriptional regulator ArgP NDN11_13605 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria NDN11_13605 IPR005119 LysR, substrate-binding NDN11_13605 IPR000847 Transcription regulator HTH, LysR NDN11_13605 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_13605 IPR036390 Winged helix DNA-binding domain superfamily NDN11_13615 IPR023445 Arginine exporter protein ArgO, enterobacteria NDN11_13615 IPR001123 Amino acid exporter protein, LeuE-type NDN11_13615 IPR004777 L-lysine exporter/arginine exporter NDN11_13645 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily NDN11_13645 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal NDN11_13645 IPR023459 Transcription elongation factor GreA/GreB family NDN11_13645 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily NDN11_13645 IPR006358 Transcription elongation factor GreB NDN11_13645 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal NDN11_13645 IPR028624 Transcription elongation factor GreA/GreB NDN11_13645 IPR018151 Transcription elongation factor, GreA/GreB, conserved site NDN11_13680 IPR000189 Prokaryotic transglycosylase, active site NDN11_13680 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NDN11_13680 IPR023703 Membrane-bound lytic murein transglycosylase F NDN11_13680 IPR023346 Lysozyme-like domain superfamily NDN11_13680 IPR008258 Transglycosylase SLT domain 1 NDN11_13690 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase NDN11_13690 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal NDN11_13690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_13690 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type NDN11_13695 IPR000189 Prokaryotic transglycosylase, active site NDN11_13695 IPR008258 Transglycosylase SLT domain 1 NDN11_13695 IPR023346 Lysozyme-like domain superfamily NDN11_13700 IPR022919 Peptidase M48, protease HtpX, putative NDN11_13700 IPR001915 Peptidase M48 NDN11_13710 IPR006667 SLC41 divalent cation transporters, integral membrane domain NDN11_13710 IPR000644 CBS domain NDN11_13710 IPR006668 Magnesium transporter, MgtE intracellular domain NDN11_13710 IPR038076 MgtE, N-terminal domain superfamily NDN11_13710 IPR038048 Magnesium transporter MgtE, transmembrane domain NDN11_13710 IPR006669 Magnesium transporter MgtE NDN11_13710 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily NDN11_13715 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NDN11_13715 IPR001036 Acriflavin resistance protein NDN11_13715 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 NDN11_13720 IPR017850 Alkaline-phosphatase-like, core domain superfamily NDN11_13720 IPR040423 Phosphoethanolamine transferase NDN11_13720 IPR000917 Sulfatase, N-terminal NDN11_13725 IPR030395 Glycerophosphodiester phosphodiesterase domain NDN11_13725 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily NDN11_13740 IPR000073 Alpha/beta hydrolase fold-1 NDN11_13740 IPR029058 Alpha/Beta hydrolase fold NDN11_13750 IPR001926 Pyridoxal-phosphate dependent enzyme NDN11_13750 IPR002912 ACT domain NDN11_13750 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site NDN11_13750 IPR005789 Threonine dehydratase, catabolic NDN11_13750 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NDN11_13755 IPR021908 Protein of unknown function DUF3520 NDN11_13755 IPR022156 Uncharacterised protein YfbK, N-terminal NDN11_13755 IPR002035 von Willebrand factor, type A NDN11_13755 IPR036465 von Willebrand factor A-like domain superfamily NDN11_13765 IPR006390 Dihydropteroate synthase NDN11_13765 IPR011005 Dihydropteroate synthase-like NDN11_13765 IPR000489 Pterin-binding domain NDN11_13770 IPR003959 ATPase, AAA-type, core NDN11_13770 IPR003593 AAA+ ATPase domain NDN11_13770 IPR041569 AAA ATPase, AAA+ lid domain NDN11_13770 IPR003960 ATPase, AAA-type, conserved site NDN11_13770 IPR000642 Peptidase M41 NDN11_13770 IPR011546 Peptidase M41, FtsH extracellular NDN11_13770 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_13770 IPR005936 Peptidase, FtsH NDN11_13770 IPR037219 Peptidase M41-like NDN11_13775 IPR015507 Ribosomal RNA large subunit methyltransferase E NDN11_13775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_13775 IPR002877 Ribosomal RNA methyltransferase FtsJ domain NDN11_13780 IPR035920 YhbY-like superfamily NDN11_13780 IPR017924 RNA-binding protein YhbY NDN11_13780 IPR001890 RNA-binding, CRM domain NDN11_13795 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain NDN11_13795 IPR029062 Class I glutamine amidotransferase-like NDN11_13795 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily NDN11_13795 IPR006274 Carbamoyl-phosphate synthase, small subunit NDN11_13795 IPR017926 Glutamine amidotransferase NDN11_13795 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain NDN11_13800 IPR016185 Pre-ATP-grasp domain superfamily NDN11_13800 IPR036914 Methylglyoxal synthase-like domain superfamily NDN11_13800 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain NDN11_13800 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain NDN11_13800 IPR011761 ATP-grasp fold NDN11_13800 IPR006275 Carbamoyl-phosphate synthase, large subunit NDN11_13800 IPR011607 Methylglyoxal synthase-like domain NDN11_13800 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily NDN11_13800 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain NDN11_13800 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NDN11_13805 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily NDN11_13805 IPR006359 Transcription elongation factor GreA NDN11_13805 IPR018151 Transcription elongation factor, GreA/GreB, conserved site NDN11_13805 IPR028624 Transcription elongation factor GreA/GreB NDN11_13805 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal NDN11_13805 IPR023459 Transcription elongation factor GreA/GreB family NDN11_13805 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal NDN11_13805 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily NDN11_13815 IPR010105 TonB-dependent siderophore receptor NDN11_13815 IPR012910 TonB-dependent receptor, plug domain NDN11_13815 IPR011662 Secretin/TonB, short N-terminal domain NDN11_13815 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_13815 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_13815 IPR010917 TonB-dependent receptor, conserved site NDN11_13815 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_13815 IPR039423 TonB-dependent receptor-like NDN11_13820 IPR001451 Hexapeptide repeat NDN11_13820 IPR011004 Trimeric LpxA-like superfamily NDN11_13820 IPR018357 Hexapeptide transferase, conserved site NDN11_13825 IPR006016 UspA NDN11_13825 IPR006015 Universal stress protein A family NDN11_13825 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_13830 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_13830 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain NDN11_13830 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding NDN11_13840 IPR029052 Metallo-dependent phosphatase-like NDN11_13840 IPR019079 Capsule synthesis protein, CapA NDN11_13940 IPR006153 Cation/H+ exchanger NDN11_13940 IPR018422 Cation/H+ exchanger, CPA1 family NDN11_13940 IPR038770 Sodium/solute symporter superfamily NDN11_13945 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative NDN11_13950 IPR008526 Inner membrane protein YedI NDN11_13955 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NDN11_13955 IPR002305 Aminoacyl-tRNA synthetase, class Ic NDN11_13955 IPR024109 Tryptophan-tRNA ligase, bacterial-type NDN11_13955 IPR002306 Tryptophan-tRNA ligase NDN11_13955 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_13960 IPR010840 Protein of unknown function DUF1449 NDN11_13965 IPR001107 Band 7 domain NDN11_13965 IPR036013 Band 7/SPFH domain superfamily NDN11_13965 IPR031905 Flotillin, C-terminal domain NDN11_13965 IPR027705 Flotillin family NDN11_13980 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site NDN11_13980 IPR003781 CoA-binding NDN11_13980 IPR005810 Succinyl-CoA ligase, alpha subunit NDN11_13980 IPR005811 ATP-citrate lyase/succinyl-CoA ligase NDN11_13980 IPR036291 NAD(P)-binding domain superfamily NDN11_13980 IPR016102 Succinyl-CoA synthetase-like NDN11_13980 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site NDN11_13985 IPR016102 Succinyl-CoA synthetase-like NDN11_13985 IPR013815 ATP-grasp fold, subdomain 1 NDN11_13985 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site NDN11_13985 IPR005811 ATP-citrate lyase/succinyl-CoA ligase NDN11_13985 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type NDN11_13985 IPR005809 Succinate--CoA synthetase, beta subunit NDN11_13985 IPR011761 ATP-grasp fold NDN11_13990 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site NDN11_13990 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I NDN11_13990 IPR006258 Dihydrolipoamide dehydrogenase NDN11_13990 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NDN11_13990 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily NDN11_13990 IPR023753 FAD/NAD(P)-binding domain NDN11_13990 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_13995 IPR006255 Dihydrolipoamide succinyltransferase NDN11_13995 IPR011053 Single hybrid motif NDN11_13995 IPR004167 Peripheral subunit-binding domain NDN11_13995 IPR036625 E3-binding domain superfamily NDN11_13995 IPR000089 Biotin/lipoyl attachment NDN11_13995 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain NDN11_13995 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site NDN11_13995 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily NDN11_14000 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain NDN11_14000 IPR011603 2-oxoglutarate dehydrogenase E1 component NDN11_14000 IPR001017 Dehydrogenase, E1 component NDN11_14000 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal NDN11_14000 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily NDN11_14000 IPR029061 Thiamin diphosphate-binding fold NDN11_14000 IPR005475 Transketolase-like, pyrimidine-binding domain NDN11_14010 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal NDN11_14010 IPR009051 Alpha-helical ferredoxin NDN11_14010 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein NDN11_14010 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NDN11_14010 IPR012675 Beta-grasp domain superfamily NDN11_14010 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain NDN11_14010 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NDN11_14010 IPR036010 2Fe-2S ferredoxin-like superfamily NDN11_14015 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain NDN11_14015 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_14015 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site NDN11_14015 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily NDN11_14015 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal NDN11_14015 IPR011281 Succinate dehydrogenase, flavoprotein subunit NDN11_14015 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit NDN11_14015 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily NDN11_14020 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit NDN11_14020 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor NDN11_14020 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit NDN11_14025 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit NDN11_14025 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit NDN11_14025 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit NDN11_14025 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site NDN11_14030 IPR016142 Citrate synthase-like, large alpha subdomain NDN11_14030 IPR016143 Citrate synthase-like, small alpha subdomain NDN11_14030 IPR002020 Citrate synthase NDN11_14030 IPR019810 Citrate synthase active site NDN11_14030 IPR024176 Citrate synthase, bacterial-type NDN11_14030 IPR036969 Citrate synthase superfamily NDN11_14030 IPR010953 Citrate synthase, type I NDN11_14045 IPR040503 UPF0176, acylphosphatase-like domain NDN11_14045 IPR001763 Rhodanese-like domain NDN11_14045 IPR036873 Rhodanese-like domain superfamily NDN11_14045 IPR020936 Uncharacterised protein family UPF0176 NDN11_14050 IPR032816 SNARE associated Golgi protein NDN11_14055 IPR037422 HTH-type transcriptional regulator BlaA, PBP2 domain NDN11_14055 IPR005119 LysR, substrate-binding NDN11_14055 IPR000847 Transcription regulator HTH, LysR NDN11_14055 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_14055 IPR036390 Winged helix DNA-binding domain superfamily NDN11_14060 IPR004778 Homoserine/Threonine efflux protein NDN11_14060 IPR001123 Amino acid exporter protein, LeuE-type NDN11_14075 IPR007630 RNA polymerase sigma-70 region 4 NDN11_14075 IPR012760 RNA polymerase sigma factor RpoD, C-terminal NDN11_14075 IPR013324 RNA polymerase sigma factor, region 3/4-like NDN11_14075 IPR013325 RNA polymerase sigma factor, region 2 NDN11_14075 IPR042189 Sigma-70 factor, region 1.1 superfamily NDN11_14075 IPR007127 RNA polymerase sigma factor 70, region 1.1 NDN11_14075 IPR007631 RNA polymerase sigma factor 70, non-essential domain NDN11_14075 IPR007624 RNA polymerase sigma-70 region 3 NDN11_14075 IPR007627 RNA polymerase sigma-70 region 2 NDN11_14075 IPR009042 RNA polymerase sigma-70 region 1.2 NDN11_14075 IPR000943 RNA polymerase sigma-70 NDN11_14075 IPR014284 RNA polymerase sigma-70 like domain NDN11_14075 IPR028630 RNA polymerase sigma factor RpoD NDN11_14075 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_14080 IPR007454 Uncharacterised protein family UPF0250 NDN11_14080 IPR027471 YbeD-like domain superfamily NDN11_14090 IPR000544 Octanoyltransferase NDN11_14090 IPR020605 Octanoyltransferase, conserved site NDN11_14090 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain NDN11_14100 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA NDN11_14100 IPR018211 Alcohol dehydrogenase, iron-type, conserved site NDN11_14100 IPR039697 Iron-type alcohol dehydrogenase-like NDN11_14105 IPR002293 Amino acid/polyamine transporter I NDN11_14110 IPR008254 Flavodoxin/nitric oxide synthase NDN11_14110 IPR005025 NADPH-dependent FMN reductase-like NDN11_14110 IPR029039 Flavoprotein-like superfamily NDN11_14115 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_14115 IPR036390 Winged helix DNA-binding domain superfamily NDN11_14115 IPR002577 Helix-turn-helix, HxlR type NDN11_14125 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase NDN11_14125 IPR029028 Alpha/beta knot methyltransferases NDN11_14125 IPR001537 tRNA/rRNA methyltransferase, SpoU type NDN11_14125 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NDN11_14130 IPR028281 Siroheme synthase, central domain NDN11_14130 IPR012409 Sirohaem synthase NDN11_14130 IPR037115 Sirohaem synthase, dimerisation domain superfamily NDN11_14130 IPR036291 NAD(P)-binding domain superfamily NDN11_14130 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site NDN11_14130 IPR014776 Tetrapyrrole methylase, subdomain 2 NDN11_14130 IPR014777 Tetrapyrrole methylase, subdomain 1 NDN11_14130 IPR035996 Tetrapyrrole methylase superfamily NDN11_14130 IPR000878 Tetrapyrrole methylase NDN11_14130 IPR006366 Uroporphyrin-III C-methyltransferase NDN11_14130 IPR019478 Sirohaem synthase, dimerisation domain NDN11_14130 IPR006367 Sirohaem synthase, N-terminal NDN11_14135 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) NDN11_14135 IPR006195 Aminoacyl-tRNA synthetase, class II NDN11_14135 IPR002317 Serine-tRNA ligase, type1 NDN11_14135 IPR015866 Serine-tRNA synthetase, type1, N-terminal NDN11_14135 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily NDN11_14135 IPR033729 Serine-tRNA ligase catalytic core domain NDN11_14135 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm NDN11_14145 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria NDN11_14145 IPR004564 Outer membrane lipoprotein carrier protein LolA-like NDN11_14145 IPR029046 Lipoprotein localisation LolA/LolB/LppX NDN11_14150 IPR012093 Pirin NDN11_14150 IPR008778 Pirin, C-terminal domain NDN11_14150 IPR003829 Pirin, N-terminal domain NDN11_14150 IPR014710 RmlC-like jelly roll fold NDN11_14150 IPR011051 RmlC-like cupin domain superfamily NDN11_14155 IPR001684 Ribosomal protein L27 NDN11_14155 IPR018261 Ribosomal protein L27, conserved site NDN11_14160 IPR018258 Ribosomal protein L21, conserved site NDN11_14160 IPR036164 L21-like superfamily NDN11_14160 IPR028909 Ribosomal protein L21-like NDN11_14160 IPR001787 Ribosomal protein L21 NDN11_14165 IPR033749 Polyprenyl synthetase, conserved site NDN11_14165 IPR000092 Polyprenyl synthetase NDN11_14165 IPR008949 Isoprenoid synthase domain superfamily NDN11_14175 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NDN11_14175 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily NDN11_14180 IPR006143 RND efflux pump, membrane fusion protein NDN11_14180 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NDN11_14185 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 NDN11_14185 IPR001036 Acriflavin resistance protein NDN11_14185 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NDN11_14190 IPR010131 RND efflux system, outer membrane lipoprotein, NodT NDN11_14190 IPR003423 Outer membrane efflux protein NDN11_14195 IPR035439 UPF0145 domain superfamily NDN11_14195 IPR002765 Uncharacterised protein family UPF0145 NDN11_14200 IPR035439 UPF0145 domain superfamily NDN11_14200 IPR002765 Uncharacterised protein family UPF0145 NDN11_14205 IPR011701 Major facilitator superfamily NDN11_14205 IPR020846 Major facilitator superfamily domain NDN11_14205 IPR036259 MFS transporter superfamily NDN11_14205 IPR026355 Oxalate/formate antiporter NDN11_14205 IPR004741 Oxalate/formate antiporter family transporter NDN11_14215 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase NDN11_14215 IPR036291 NAD(P)-binding domain superfamily NDN11_14215 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_14215 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_14230 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily NDN11_14230 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm NDN11_14230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_14230 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding NDN11_14230 IPR002303 Valine-tRNA ligase NDN11_14230 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain NDN11_14230 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm NDN11_14230 IPR033705 Valyl tRNA synthetase, anticodon-binding domain NDN11_14230 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding NDN11_14230 IPR002300 Aminoacyl-tRNA synthetase, class Ia NDN11_14230 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NDN11_14240 IPR002686 Transposase IS200-like NDN11_14240 IPR036515 Transposase IS200-like superfamily NDN11_14260 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_14260 IPR011294 3-hydroxybutyrate dehydrogenase NDN11_14260 IPR036291 NAD(P)-binding domain superfamily NDN11_14260 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_14265 IPR003474 Gluconate transporter NDN11_14270 IPR000847 Transcription regulator HTH, LysR NDN11_14270 IPR005119 LysR, substrate-binding NDN11_14270 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_14270 IPR036390 Winged helix DNA-binding domain superfamily NDN11_14275 IPR037171 NagB/RpiA transferase-like NDN11_14275 IPR004163 Coenzyme A transferase binding site NDN11_14275 IPR004165 Coenzyme A transferase family I NDN11_14275 IPR012792 3-oxoacid CoA-transferase, subunit A NDN11_14280 IPR012791 3-oxoacid CoA-transferase, subunit B NDN11_14280 IPR004165 Coenzyme A transferase family I NDN11_14280 IPR004164 Coenzyme A transferase active site NDN11_14280 IPR037171 NagB/RpiA transferase-like NDN11_14285 IPR006161 Conserved hypothetical protein CHP00336 NDN11_14285 IPR006160 Short chain fatty acid transporter AtoE NDN11_14290 IPR024041 Ammonium transporter AmtB-like domain NDN11_14290 IPR029020 Ammonium/urea transporter NDN11_14290 IPR001905 Ammonium transporter NDN11_14290 IPR018047 Ammonium transporter, conserved site NDN11_14295 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NDN11_14300 IPR035906 MetI-like superfamily NDN11_14300 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_14300 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ NDN11_14300 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain NDN11_14305 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain NDN11_14305 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM NDN11_14305 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_14305 IPR035906 MetI-like superfamily NDN11_14310 IPR017871 ABC transporter, conserved site NDN11_14310 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_14310 IPR003439 ABC transporter-like NDN11_14310 IPR003593 AAA+ ATPase domain NDN11_14310 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type NDN11_14325 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_14325 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_14325 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_14325 IPR005467 Histidine kinase domain NDN11_14325 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_14325 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_14325 IPR013727 Two-component sensor kinase, N-terminal NDN11_14330 IPR039420 Transcriptional regulatory protein WalR-like NDN11_14330 IPR001789 Signal transduction response regulator, receiver domain NDN11_14330 IPR001867 OmpR/PhoB-type DNA-binding domain NDN11_14330 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_14330 IPR011006 CheY-like superfamily NDN11_14335 IPR040423 Phosphoethanolamine transferase NDN11_14335 IPR000917 Sulfatase, N-terminal NDN11_14335 IPR017850 Alkaline-phosphatase-like, core domain superfamily NDN11_14335 IPR012549 Phosphoethanolamine transferase, N-terminal NDN11_14355 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NDN11_14355 IPR001423 Lysophospholipase patatin, conserved site NDN11_14355 IPR002641 Patatin-like phospholipase domain NDN11_14365 IPR001107 Band 7 domain NDN11_14365 IPR036013 Band 7/SPFH domain superfamily NDN11_14365 IPR018080 Band 7/stomatin-like, conserved site NDN11_14365 IPR001972 Stomatin family NDN11_14370 IPR038056 YjbR-like superfamily NDN11_14370 IPR007351 Uncharacterised protein YjbR NDN11_14375 IPR008949 Isoprenoid synthase domain superfamily NDN11_14375 IPR000092 Polyprenyl synthetase NDN11_14375 IPR033749 Polyprenyl synthetase, conserved site NDN11_14380 IPR012709 2-methyl-aconitate isomerase PrpF NDN11_14380 IPR007400 PrpF protein NDN11_14385 IPR004840 Amino acid permease, conserved site NDN11_14385 IPR004841 Amino acid permease/ SLC12A domain NDN11_14395 IPR036651 Glutamine synthetase, N-terminal domain superfamily NDN11_14395 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain NDN11_14395 IPR008146 Glutamine synthetase, catalytic domain NDN11_14395 IPR027303 Glutamine synthetase, glycine-rich site NDN11_14405 IPR010917 TonB-dependent receptor, conserved site NDN11_14405 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_14405 IPR039426 Vitamin B12 transporter BtuB-like NDN11_14405 IPR012910 TonB-dependent receptor, plug domain NDN11_14405 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_14405 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_14405 IPR010916 TonB box, conserved site NDN11_14415 IPR033879 Undecaprenyl-diphosphatase NDN11_14415 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NDN11_14415 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily NDN11_14425 IPR014738 Citrate transporter NDN11_14425 IPR004680 Citrate transporter-like domain NDN11_14430 IPR018060 DNA binding HTH domain, AraC-type NDN11_14430 IPR037923 Transcription regulator HTH-like NDN11_14430 IPR009057 Homeobox-like domain superfamily NDN11_14430 IPR003313 AraC-type arabinose-binding/dimerisation domain NDN11_14430 IPR020449 Transcription regulator HTH, AraC- type NDN11_14430 IPR018062 HTH domain AraC-type, conserved site NDN11_14435 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NDN11_14435 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_14435 IPR015590 Aldehyde dehydrogenase domain NDN11_14435 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent NDN11_14435 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_14435 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_14440 IPR008517 Protein of unknown function DUF799 NDN11_14450 IPR005534 Curli production assembly/transport component CsgG NDN11_14455 IPR001789 Signal transduction response regulator, receiver domain NDN11_14455 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_14455 IPR001867 OmpR/PhoB-type DNA-binding domain NDN11_14455 IPR011006 CheY-like superfamily NDN11_14455 IPR039420 Transcriptional regulatory protein WalR-like NDN11_14460 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_14460 IPR029016 GAF-like domain superfamily NDN11_14460 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_14460 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_14460 IPR005467 Histidine kinase domain NDN11_14460 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_14460 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_14460 IPR038318 KdpD, transmembrane domain superfamily NDN11_14460 IPR025201 Sensor protein KdpD, transmembrane domain NDN11_14460 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_14460 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal NDN11_14465 IPR003820 Potassium-transporting ATPase C chain NDN11_14470 IPR023299 P-type ATPase, cytoplasmic domain N NDN11_14470 IPR018303 P-type ATPase, phosphorylation site NDN11_14470 IPR023298 P-type ATPase, transmembrane domain superfamily NDN11_14470 IPR008250 P-type ATPase, A domain superfamily NDN11_14470 IPR036412 HAD-like superfamily NDN11_14470 IPR006391 P-type ATPase, B chain, subfamily IA NDN11_14470 IPR001757 P-type ATPase NDN11_14475 IPR023298 P-type ATPase, transmembrane domain superfamily NDN11_14475 IPR004623 Potassium-transporting ATPase A chain NDN11_14490 IPR023214 HAD superfamily NDN11_14490 IPR036412 HAD-like superfamily NDN11_14490 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein NDN11_14495 IPR011800 Phosphoadenosine phosphosulphate reductase CysH NDN11_14495 IPR002500 Phosphoadenosine phosphosulphate reductase NDN11_14495 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_14495 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase NDN11_14500 IPR014292 Acyltransferase, WS/DGAT/MGAT NDN11_14500 IPR009721 O-acyltransferase WSD1, C-terminal NDN11_14500 IPR004255 O-acyltransferase, WSD1, N-terminal NDN11_14510 IPR003029 S1 domain NDN11_14510 IPR012340 Nucleic acid-binding, OB-fold NDN11_14510 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G NDN11_14510 IPR004659 Ribonuclease E/G NDN11_14510 IPR022967 RNA-binding domain, S1 NDN11_14515 IPR029001 Inosine triphosphate pyrophosphatase-like NDN11_14515 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein NDN11_14525 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 NDN11_14525 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 NDN11_14525 IPR007221 Rod shape-determining protein MreC NDN11_14530 IPR004753 Cell shape determining protein MreB NDN11_14535 IPR003837 Glu-tRNAGln amidotransferase C subunit NDN11_14535 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C NDN11_14540 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit NDN11_14540 IPR036928 Amidase signature (AS) superfamily NDN11_14540 IPR000120 Amidase NDN11_14540 IPR020556 Amidase, conserved site NDN11_14540 IPR023631 Amidase signature domain NDN11_14545 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site NDN11_14545 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit NDN11_14545 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E NDN11_14545 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic NDN11_14545 IPR018027 Asn/Gln amidotransferase NDN11_14545 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like NDN11_14545 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 NDN11_14545 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 NDN11_14545 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain NDN11_14580 IPR005119 LysR, substrate-binding NDN11_14580 IPR000847 Transcription regulator HTH, LysR NDN11_14580 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_14580 IPR036390 Winged helix DNA-binding domain superfamily NDN11_14580 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain NDN11_14595 IPR024079 Metallopeptidase, catalytic domain superfamily NDN11_14595 IPR000718 Peptidase M13 NDN11_14595 IPR018497 Peptidase M13, C-terminal domain NDN11_14595 IPR042089 Peptidase M13, domain 2 NDN11_14595 IPR008753 Peptidase M13, N-terminal domain NDN11_14600 IPR036640 ABC transporter type 1, transmembrane domain superfamily NDN11_14600 IPR009248 SbmA/BacA-like NDN11_14605 IPR001423 Lysophospholipase patatin, conserved site NDN11_14605 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase NDN11_14605 IPR002641 Patatin-like phospholipase domain NDN11_14610 IPR001463 Sodium:alanine symporter NDN11_14615 IPR004445 Sodium/glutamate symport carrier protein GltS NDN11_14625 IPR029479 Nitroreductase NDN11_14625 IPR000415 Nitroreductase-like NDN11_14630 IPR004812 Drug resistance transporter Bcr/CmlA subfamily NDN11_14630 IPR011701 Major facilitator superfamily NDN11_14630 IPR020846 Major facilitator superfamily domain NDN11_14630 IPR036259 MFS transporter superfamily NDN11_14635 IPR010020 Integral membrane protein, YccS/YhfK NDN11_14635 IPR032692 Integral membrane protein YccS, N-terminal NDN11_14635 IPR010019 Integral membrane protein, YccS NDN11_14645 IPR017938 Riboflavin synthase-like beta-barrel NDN11_14645 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NDN11_14645 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily NDN11_14645 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain NDN11_14645 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding NDN11_14645 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria NDN11_14645 IPR017927 FAD-binding domain, ferredoxin reductase-type NDN11_14645 IPR001094 Flavodoxin-like NDN11_14645 IPR008254 Flavodoxin/nitric oxide synthase NDN11_14645 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase NDN11_14645 IPR029039 Flavoprotein-like superfamily NDN11_14645 IPR001433 Oxidoreductase FAD/NAD(P)-binding NDN11_14690 IPR005490 L,D-transpeptidase catalytic domain NDN11_14690 IPR038063 L,D-transpeptidase catalytic domain-like NDN11_14690 IPR041597 L,D-transpeptidase C-terminal domain NDN11_14695 IPR007401 Protein of unknown function DUF454 NDN11_14710 IPR011650 Peptidase M20, dimerisation domain NDN11_14710 IPR002933 Peptidase M20 NDN11_14710 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria NDN11_14710 IPR036264 Bacterial exopeptidase dimerisation domain NDN11_14720 IPR036641 HPT domain superfamily NDN11_14720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_14720 IPR005467 Histidine kinase domain NDN11_14720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_14720 IPR011006 CheY-like superfamily NDN11_14720 IPR002545 CheW-like domain NDN11_14720 IPR036061 CheW-like domain superfamily NDN11_14720 IPR001789 Signal transduction response regulator, receiver domain NDN11_14720 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_14720 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain NDN11_14725 IPR003660 HAMP domain NDN11_14725 IPR004090 Chemotaxis methyl-accepting receptor NDN11_14725 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain NDN11_14725 IPR029095 NarX-like, N-terminal NDN11_14730 IPR039315 Chemotaxis protein CheW NDN11_14730 IPR036061 CheW-like domain superfamily NDN11_14730 IPR002545 CheW-like domain NDN11_14735 IPR001789 Signal transduction response regulator, receiver domain NDN11_14735 IPR011006 CheY-like superfamily NDN11_14740 IPR011006 CheY-like superfamily NDN11_14740 IPR001789 Signal transduction response regulator, receiver domain NDN11_14750 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily NDN11_14750 IPR004154 Anticodon-binding NDN11_14750 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) NDN11_14750 IPR036621 Anticodon-binding domain superfamily NDN11_14750 IPR033730 Prokaryote proline-tRNA ligase core domain NDN11_14750 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type NDN11_14750 IPR002316 Proline-tRNA ligase, class IIa NDN11_14750 IPR006195 Aminoacyl-tRNA synthetase, class II NDN11_14750 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain NDN11_14750 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 NDN11_14755 IPR036913 YegP-like superfamily NDN11_14755 IPR010879 Domain of unknown function DUF1508 NDN11_14760 IPR013987 PhnA protein, N-terminal NDN11_14760 IPR013988 PhnA protein, C-terminal NDN11_14760 IPR004624 PhnA protein NDN11_14765 IPR007438 Protein of unknown function DUF488 NDN11_14780 IPR028896 Aminomethyltransferase-like NDN11_14780 IPR006222 Aminomethyltransferase, folate-binding domain NDN11_14780 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal NDN11_14780 IPR017703 YgfZ/GcvT conserved site NDN11_14795 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal NDN11_14795 IPR033954 Disulphide bond isomerase, DsbC/G NDN11_14795 IPR012336 Thioredoxin-like fold NDN11_14795 IPR036249 Thioredoxin-like superfamily NDN11_14795 IPR017937 Thioredoxin, conserved site NDN11_14805 IPR010105 TonB-dependent siderophore receptor NDN11_14805 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_14805 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_14805 IPR039426 Vitamin B12 transporter BtuB-like NDN11_14805 IPR012910 TonB-dependent receptor, plug domain NDN11_14805 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_14810 IPR010979 Ribosomal protein S13-like, H2TH NDN11_14810 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain NDN11_14810 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding NDN11_14810 IPR020629 Formamidopyrimidine-DNA glycosylase NDN11_14810 IPR010663 Zinc finger, FPG/IleRS-type NDN11_14810 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type NDN11_14810 IPR035937 MutM-like, N-terminal NDN11_14815 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type NDN11_14815 IPR023059 Foldase protein PrsA NDN11_14815 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site NDN11_14815 IPR027304 Trigger factor/SurA domain superfamily NDN11_14825 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L NDN11_14825 IPR036019 Gated mechanosensitive channel NDN11_14825 IPR019823 Large-conductance mechanosensitive channel, conserved site NDN11_14825 IPR001185 Large-conductance mechanosensitive channel NDN11_14830 IPR035651 BipA, domain V NDN11_14830 IPR006298 GTP-binding protein TypA NDN11_14830 IPR042116 GTP-binding protein TypA/BipA, C-terminal NDN11_14830 IPR000795 Transcription factor, GTP-binding domain NDN11_14830 IPR009000 Translation protein, beta-barrel domain superfamily NDN11_14830 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_14830 IPR031157 Tr-type G domain, conserved site NDN11_14830 IPR000640 Elongation factor EFG, domain V-like NDN11_14830 IPR035647 EF-G domain III/V-like NDN11_14830 IPR005225 Small GTP-binding protein domain NDN11_14830 IPR004161 Translation elongation factor EFTu-like, domain 2 NDN11_14835 IPR006042 Xanthine/uracil permease NDN11_14835 IPR006043 Xanthine/uracil/vitamin C permease NDN11_14840 IPR007848 Methyltransferase small domain NDN11_14840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_14840 IPR023543 rRNA small subunit methyltransferase C NDN11_14840 IPR013675 Methyltransferase small, N-terminal NDN11_14840 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NDN11_14845 IPR004841 Amino acid permease/ SLC12A domain NDN11_14845 IPR004840 Amino acid permease, conserved site NDN11_14850 IPR036025 tRNA-splicing ligase RtcB-like superfamily NDN11_14850 IPR001233 tRNA-splicing ligase, RtcB NDN11_14860 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel NDN11_14860 IPR027385 Outer membrane protein beta-barrel domain NDN11_14860 IPR006664 Outer membrane protein, bacterial NDN11_14860 IPR006665 OmpA-like domain NDN11_14860 IPR036737 OmpA-like domain superfamily NDN11_14865 IPR036737 OmpA-like domain superfamily NDN11_14865 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel NDN11_14865 IPR006664 Outer membrane protein, bacterial NDN11_14865 IPR027385 Outer membrane protein beta-barrel domain NDN11_14865 IPR006665 OmpA-like domain NDN11_14875 IPR020616 Thiolase, N-terminal NDN11_14875 IPR020613 Thiolase, conserved site NDN11_14875 IPR020617 Thiolase, C-terminal NDN11_14875 IPR020610 Thiolase, active site NDN11_14875 IPR020615 Thiolase, acyl-enzyme intermediate active site NDN11_14875 IPR016039 Thiolase-like NDN11_14875 IPR002155 Thiolase NDN11_14885 IPR000390 Small multidrug resistance protein family NDN11_14895 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain NDN11_14895 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily NDN11_14895 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain NDN11_14895 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site NDN11_14900 IPR001479 Quinoprotein dehydrogenase, conserved site NDN11_14900 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NDN11_14900 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NDN11_14900 IPR017511 PQQ-dependent membrane bound dehydrogenase NDN11_14900 IPR002372 Pyrrolo-quinoline quinone repeat NDN11_14905 IPR038673 Carbohydrate-selective porin OprB superfamily NDN11_14905 IPR007049 Carbohydrate-selective porin OprB NDN11_14910 IPR023606 CoA-transferase family III domain superfamily NDN11_14910 IPR003673 CoA-transferase family III NDN11_14915 IPR018062 HTH domain AraC-type, conserved site NDN11_14915 IPR018060 DNA binding HTH domain, AraC-type NDN11_14915 IPR037923 Transcription regulator HTH-like NDN11_14915 IPR009057 Homeobox-like domain superfamily NDN11_14915 IPR020449 Transcription regulator HTH, AraC- type NDN11_14915 IPR003313 AraC-type arabinose-binding/dimerisation domain NDN11_14945 IPR016039 Thiolase-like NDN11_14945 IPR002155 Thiolase NDN11_14945 IPR020613 Thiolase, conserved site NDN11_14945 IPR020616 Thiolase, N-terminal NDN11_14945 IPR020617 Thiolase, C-terminal NDN11_14945 IPR020610 Thiolase, active site NDN11_14945 IPR020615 Thiolase, acyl-enzyme intermediate active site NDN11_14950 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal NDN11_14950 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site NDN11_14950 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding NDN11_14950 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_14950 IPR029045 ClpP/crotonase-like domain superfamily NDN11_14950 IPR001753 Enoyl-CoA hydratase/isomerase NDN11_14950 IPR012802 Fatty oxidation complex, alpha subunit FadJ NDN11_14950 IPR036291 NAD(P)-binding domain superfamily NDN11_14970 IPR000182 GNAT domain NDN11_14970 IPR039143 Glucosamine 6-phosphate N-acetyltransferase NDN11_14970 IPR016181 Acyl-CoA N-acyltransferase NDN11_14980 IPR004254 AdipoR/Haemolysin-III-related NDN11_14980 IPR005744 Hly-III NDN11_14985 IPR004736 MFS transporter, metabolite:H symporter NDN11_14985 IPR036259 MFS transporter superfamily NDN11_14985 IPR005828 Major facilitator, sugar transporter-like NDN11_14985 IPR011701 Major facilitator superfamily NDN11_14985 IPR005829 Sugar transporter, conserved site NDN11_14985 IPR020846 Major facilitator superfamily domain NDN11_15000 IPR036266 SecA, Wing/Scaffold superfamily NDN11_15000 IPR036670 SecA, preprotein cross-linking domain superfamily NDN11_15000 IPR011116 SecA Wing/Scaffold NDN11_15000 IPR014018 SecA motor DEAD NDN11_15000 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_15000 IPR004027 SEC-C motif NDN11_15000 IPR000185 Protein translocase subunit SecA NDN11_15000 IPR011115 SecA DEAD-like, N-terminal NDN11_15000 IPR011130 SecA, preprotein cross-linking domain NDN11_15000 IPR020937 SecA conserved site NDN11_15005 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant NDN11_15005 IPR024706 Peroxiredoxin, AhpC-type NDN11_15005 IPR036249 Thioredoxin-like superfamily NDN11_15005 IPR019479 Peroxiredoxin, C-terminal NDN11_15005 IPR022915 Peroxiredoxin, TDXH subfamily NDN11_15005 IPR013766 Thioredoxin domain NDN11_15010 IPR001279 Metallo-beta-lactamase NDN11_15010 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NDN11_15030 IPR036565 Mur-like, catalytic domain superfamily NDN11_15030 IPR036615 Mur ligase, C-terminal domain superfamily NDN11_15030 IPR004101 Mur ligase, C-terminal NDN11_15030 IPR018109 Folylpolyglutamate synthetase, conserved site NDN11_15030 IPR001645 Folylpolyglutamate synthetase NDN11_15030 IPR013221 Mur ligase, central NDN11_15035 IPR029045 ClpP/crotonase-like domain superfamily NDN11_15035 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal NDN11_15035 IPR034733 Acetyl-CoA carboxylase NDN11_15035 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit NDN11_15040 IPR011060 Ribulose-phosphate binding barrel NDN11_15040 IPR018204 Tryptophan synthase, alpha chain, active site NDN11_15040 IPR002028 Tryptophan synthase, alpha chain NDN11_15040 IPR013785 Aldolase-type TIM barrel NDN11_15070 IPR006179 5'-Nucleotidase/apyrase NDN11_15070 IPR029052 Metallo-dependent phosphatase-like NDN11_15070 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type NDN11_15080 IPR006654 Tryptophan synthase, beta chain NDN11_15080 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NDN11_15080 IPR023026 Tryptophan synthase beta chain/beta chain-like NDN11_15080 IPR006653 Tryptophan synthase, beta chain, conserved site NDN11_15080 IPR001926 Pyridoxal-phosphate dependent enzyme NDN11_15085 IPR011060 Ribulose-phosphate binding barrel NDN11_15085 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) NDN11_15085 IPR013785 Aldolase-type TIM barrel NDN11_15090 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_15090 IPR039426 Vitamin B12 transporter BtuB-like NDN11_15090 IPR012910 TonB-dependent receptor, plug domain NDN11_15090 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_15090 IPR010101 TonB-dependent vitamin B12 transporter BtuB NDN11_15090 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_15090 IPR010916 TonB box, conserved site NDN11_15095 IPR016030 Cobalamin adenosyltransferase-like NDN11_15095 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type NDN11_15095 IPR036451 Cobalamin adenosyltransferase-like superfamily NDN11_15115 IPR003846 Protein adenylyltransferase SelO NDN11_15125 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_15125 IPR039420 Transcriptional regulatory protein WalR-like NDN11_15125 IPR001789 Signal transduction response regulator, receiver domain NDN11_15125 IPR016032 Signal transduction response regulator, C-terminal effector NDN11_15125 IPR001867 OmpR/PhoB-type DNA-binding domain NDN11_15125 IPR011006 CheY-like superfamily NDN11_15130 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_15130 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_15130 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_15130 IPR003660 HAMP domain NDN11_15130 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_15130 IPR005467 Histidine kinase domain NDN11_15130 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_15140 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_15140 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_15140 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_15140 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NDN11_15140 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_15140 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_15140 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain NDN11_15145 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_15145 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_15145 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NDN11_15145 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_15145 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_15145 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain NDN11_15145 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_15155 IPR009315 Phosphate-starvation-induced PsiE NDN11_15155 IPR020948 Phosphate-starvation-induced PsiE-like NDN11_15185 IPR039426 Vitamin B12 transporter BtuB-like NDN11_15185 IPR012910 TonB-dependent receptor, plug domain NDN11_15185 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_15185 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_15195 IPR012340 Nucleic acid-binding, OB-fold NDN11_15195 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type NDN11_15195 IPR029351 GAD domain NDN11_15195 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb NDN11_15195 IPR004115 GAD-like domain superfamily NDN11_15195 IPR006195 Aminoacyl-tRNA synthetase, class II NDN11_15195 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) NDN11_15195 IPR004524 Aspartate-tRNA ligase, type 1 NDN11_15220 IPR002654 Glycosyl transferase, family 25 NDN11_15225 IPR001173 Glycosyltransferase 2-like NDN11_15225 IPR002495 Glycosyl transferase, family 8 NDN11_15225 IPR029044 Nucleotide-diphospho-sugar transferases NDN11_15230 IPR002654 Glycosyl transferase, family 25 NDN11_15245 IPR031358 Stealth protein CR1, conserved region 1 NDN11_15245 IPR021520 Stealth protein CR2, conserved region 2 NDN11_15255 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation NDN11_15255 IPR017476 UDP-glucose/GDP-mannose dehydrogenase NDN11_15255 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal NDN11_15255 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal NDN11_15255 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type NDN11_15255 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily NDN11_15255 IPR036291 NAD(P)-binding domain superfamily NDN11_15255 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_15260 IPR001509 NAD-dependent epimerase/dehydratase NDN11_15260 IPR036291 NAD(P)-binding domain superfamily NDN11_15270 IPR001544 Aminotransferase class IV NDN11_15270 IPR018300 Aminotransferase, class IV, conserved site NDN11_15270 IPR036038 Aminotransferase-like, PLP-dependent enzymes NDN11_15270 IPR005785 Branched-chain amino acid aminotransferase I NDN11_15270 IPR033939 Branched-chain aminotransferase NDN11_15275 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme NDN11_15275 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain NDN11_15275 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase NDN11_15280 IPR013767 PAS fold NDN11_15280 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_15280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_15280 IPR005467 Histidine kinase domain NDN11_15280 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_15280 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_15280 IPR000014 PAS domain NDN11_15280 IPR035965 PAS domain superfamily NDN11_15280 IPR031967 PhoR, single Cache-like domain NDN11_15280 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_15305 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily NDN11_15305 IPR042119 QueA, domain 2 NDN11_15305 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA NDN11_15305 IPR042118 QueA, domain 1 NDN11_15320 IPR004803 tRNA-guanine transglycosylase NDN11_15320 IPR036511 Queuine tRNA-ribosyltransferase-like NDN11_15320 IPR002616 tRNA-guanine(15) transglycosylase-like NDN11_15325 IPR003849 Preprotein translocase YajC NDN11_15330 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NDN11_15330 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial NDN11_15330 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site NDN11_15330 IPR005791 Protein translocase subunit SecD NDN11_15330 IPR027398 SecD export protein N-terminal TM domain NDN11_15335 IPR005665 Protein-export membrane protein SecF, bacterial NDN11_15335 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NDN11_15335 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site NDN11_15335 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial NDN11_15345 IPR031166 EngA-type guanine nucleotide-binding (G) domain NDN11_15345 IPR016484 GTP-binding protein EngA NDN11_15345 IPR006073 GTP binding domain NDN11_15345 IPR032859 GTPase Der, C-terminal KH-domain-like NDN11_15345 IPR015946 K homology domain-like, alpha/beta NDN11_15345 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_15345 IPR005225 Small GTP-binding protein domain NDN11_15350 IPR002372 Pyrrolo-quinoline quinone repeat NDN11_15350 IPR015943 WD40/YVTN repeat-like-containing domain superfamily NDN11_15350 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NDN11_15350 IPR017687 Outer membrane protein assembly factor BamB NDN11_15350 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NDN11_15360 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain NDN11_15360 IPR006195 Aminoacyl-tRNA synthetase, class II NDN11_15360 IPR004154 Anticodon-binding NDN11_15360 IPR036621 Anticodon-binding domain superfamily NDN11_15360 IPR015807 Histidine-tRNA ligase NDN11_15360 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit NDN11_15365 IPR011005 Dihydropteroate synthase-like NDN11_15365 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type NDN11_15365 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial NDN11_15375 IPR019734 Tetratricopeptide repeat NDN11_15375 IPR011990 Tetratricopeptide-like helical domain superfamily NDN11_15375 IPR013026 Tetratricopeptide repeat-containing domain NDN11_15375 IPR013360 Pilus biogenesis/stability type IV, PilW NDN11_15380 IPR040072 Methyltransferase (Class A) NDN11_15380 IPR027492 Dual-specificity RNA methyltransferase RlmN NDN11_15380 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr NDN11_15380 IPR007197 Radical SAM NDN11_15380 IPR013785 Aldolase-type TIM barrel NDN11_15385 IPR023005 Nucleoside diphosphate kinase, active site NDN11_15385 IPR001564 Nucleoside diphosphate kinase NDN11_15385 IPR036850 Nucleoside diphosphate kinase-like domain superfamily NDN11_15385 IPR034907 Nucleoside diphosphate kinase-like domain NDN11_15390 IPR036762 IscX-like superfamily NDN11_15390 IPR007479 ISC system FeS cluster assembly, IscX NDN11_15395 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NDN11_15395 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily NDN11_15400 IPR001296 Glycosyl transferase, family 1 NDN11_15400 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NDN11_15405 IPR029052 Metallo-dependent phosphatase-like NDN11_15405 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type NDN11_15405 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) NDN11_15410 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm NDN11_15410 IPR023165 rRNA adenine dimethylase-like NDN11_15410 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal NDN11_15410 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site NDN11_15410 IPR011530 Ribosomal RNA adenine dimethylase NDN11_15410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_15415 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase NDN11_15415 IPR005255 PdxA family NDN11_15425 IPR005822 Ribosomal protein L13 NDN11_15425 IPR005823 Ribosomal protein L13, bacterial-type NDN11_15425 IPR036899 Ribosomal protein L13 superfamily NDN11_15430 IPR020574 Ribosomal protein S9, conserved site NDN11_15430 IPR023035 Ribosomal protein S9, bacterial/plastid NDN11_15430 IPR000754 Ribosomal protein S9 NDN11_15430 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_15430 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NDN11_15440 IPR004046 Glutathione S-transferase, C-terminal NDN11_15440 IPR010987 Glutathione S-transferase, C-terminal-like NDN11_15440 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NDN11_15440 IPR040079 Glutathione Transferase family NDN11_15440 IPR004045 Glutathione S-transferase, N-terminal NDN11_15440 IPR034341 Stringent starvation protein A, N-terminal NDN11_15440 IPR036249 Thioredoxin-like superfamily NDN11_15445 IPR036760 SspB-like superfamily NDN11_15445 IPR007481 Stringent starvation protein B NDN11_15475 IPR017766 Sphingomyelinase C/phospholipase C NDN11_15475 IPR005135 Endonuclease/exonuclease/phosphatase NDN11_15475 IPR036691 Endonuclease/exonuclease/phosphatase superfamily NDN11_15500 IPR011764 Biotin carboxylation domain NDN11_15500 IPR041265 Propionyl-coenzyme A carboxylase, BT domain NDN11_15500 IPR016185 Pre-ATP-grasp domain superfamily NDN11_15500 IPR011054 Rudiment single hybrid motif NDN11_15500 IPR011053 Single hybrid motif NDN11_15500 IPR005482 Biotin carboxylase, C-terminal NDN11_15500 IPR001882 Biotin-binding site NDN11_15500 IPR000089 Biotin/lipoyl attachment NDN11_15500 IPR005481 Biotin carboxylase-like, N-terminal domain NDN11_15500 IPR013815 ATP-grasp fold, subdomain 1 NDN11_15500 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain NDN11_15500 IPR011761 ATP-grasp fold NDN11_15510 IPR006089 Acyl-CoA dehydrogenase, conserved site NDN11_15510 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_15510 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_15510 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_15510 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_15510 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_15510 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NDN11_15515 IPR029045 ClpP/crotonase-like domain superfamily NDN11_15515 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal NDN11_15515 IPR034733 Acetyl-CoA carboxylase NDN11_15515 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal NDN11_15520 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_15520 IPR036291 NAD(P)-binding domain superfamily NDN11_15530 IPR001647 DNA-binding HTH domain, TetR-type NDN11_15530 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NDN11_15530 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal NDN11_15530 IPR009057 Homeobox-like domain superfamily NDN11_15535 IPR016181 Acyl-CoA N-acyltransferase NDN11_15535 IPR000182 GNAT domain NDN11_15545 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_15545 IPR006089 Acyl-CoA dehydrogenase, conserved site NDN11_15545 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_15545 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NDN11_15545 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_15545 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_15545 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_15600 IPR000462 CDP-alcohol phosphatidyltransferase NDN11_15600 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase NDN11_15605 IPR002052 DNA methylase, N-6 adenine-specific, conserved site NDN11_15605 IPR007473 Ribosomal RNA large subunit methyltransferase J NDN11_15605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_15625 IPR001557 L-lactate/malate dehydrogenase NDN11_15625 IPR022383 Lactate/malate dehydrogenase, C-terminal NDN11_15625 IPR036291 NAD(P)-binding domain superfamily NDN11_15625 IPR010945 Malate dehydrogenase, type 2 NDN11_15625 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal NDN11_15625 IPR001236 Lactate/malate dehydrogenase, N-terminal NDN11_15635 IPR000189 Prokaryotic transglycosylase, active site NDN11_15635 IPR010090 Phage tail tape measure protein NDN11_15635 IPR016047 Peptidase M23 NDN11_15635 IPR023346 Lysozyme-like domain superfamily NDN11_15635 IPR011055 Duplicated hybrid motif NDN11_15635 IPR008258 Transglycosylase SLT domain 1 NDN11_15640 IPR005839 Methylthiotransferase NDN11_15640 IPR006638 Elp3/MiaB/NifB NDN11_15640 IPR020612 Methylthiotransferase, conserved site NDN11_15640 IPR002792 TRAM domain NDN11_15640 IPR023404 Radical SAM, alpha/beta horseshoe NDN11_15640 IPR007197 Radical SAM NDN11_15640 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB NDN11_15640 IPR038135 Methylthiotransferase, N-terminal domain superfamily NDN11_15640 IPR013848 Methylthiotransferase, N-terminal NDN11_15645 IPR003714 PhoH-like protein NDN11_15645 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_15650 IPR023091 Metalloprotease catalytic domain superfamily, predicted NDN11_15650 IPR002036 Endoribonuclease YbeY NDN11_15650 IPR020549 Endoribonuclease YbeY, conserved site NDN11_15675 IPR000836 Phosphoribosyltransferase domain NDN11_15675 IPR010079 Xanthine phosphoribosyltransferase NDN11_15675 IPR029057 Phosphoribosyltransferase-like NDN11_15680 IPR035948 YwqG-like superfamily NDN11_15680 IPR015315 Protein of unknown function DUF1963 NDN11_15685 IPR020940 Thymidylate synthase, active site NDN11_15685 IPR000398 Thymidylate synthase NDN11_15685 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain NDN11_15685 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily NDN11_15690 IPR001796 Dihydrofolate reductase domain NDN11_15690 IPR024072 Dihydrofolate reductase-like domain superfamily NDN11_15690 IPR012259 Dihydrofolate reductase NDN11_15690 IPR017925 Dihydrofolate reductase conserved site NDN11_15705 IPR002569 Peptide methionine sulphoxide reductase MsrA NDN11_15705 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily NDN11_15715 IPR002898 MotA/TolQ/ExbB proton channel NDN11_15725 IPR002912 ACT domain NDN11_15725 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain NDN11_15725 IPR002376 Formyl transferase, N-terminal NDN11_15725 IPR036477 Formyl transferase, N-terminal domain superfamily NDN11_15725 IPR004810 Formyltetrahydrofolate deformylase NDN11_15730 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NDN11_15730 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NDN11_15730 IPR009057 Homeobox-like domain superfamily NDN11_15730 IPR013571 Transcription regulator QacR, C-terminal NDN11_15730 IPR001647 DNA-binding HTH domain, TetR-type NDN11_15735 IPR015590 Aldehyde dehydrogenase domain NDN11_15735 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent NDN11_15735 IPR029510 Aldehyde dehydrogenase, glutamic acid active site NDN11_15735 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_15735 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_15735 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_15740 IPR034704 L28p-like NDN11_15740 IPR026569 Ribosomal protein L28/L24 NDN11_15740 IPR037147 Ribosomal protein L28/L24 superfamily NDN11_15740 IPR001383 Ribosomal protein L28 NDN11_15745 IPR038584 Ribosomal protein L33 superfamily NDN11_15745 IPR001705 Ribosomal protein L33 NDN11_15745 IPR018264 Ribosomal protein L33, conserved site NDN11_15745 IPR011332 Zinc-binding ribosomal protein NDN11_15750 IPR036291 NAD(P)-binding domain superfamily NDN11_15750 IPR038770 Sodium/solute symporter superfamily NDN11_15750 IPR003148 Regulator of K+ conductance, N-terminal NDN11_15750 IPR006153 Cation/H+ exchanger NDN11_15750 IPR004771 K+/H+ exchanger NDN11_15780 IPR005751 ATP-dependent DNA helicase PcrA NDN11_15780 IPR013986 DExx box DNA helicase domain superfamily NDN11_15780 IPR000212 DNA helicase, UvrD/REP type NDN11_15780 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_15780 IPR014016 UvrD-like helicase, ATP-binding domain NDN11_15780 IPR034739 UvrD/AddA helicase, N-terminal NDN11_15780 IPR014017 UvrD-like DNA helicase, C-terminal NDN11_15795 IPR013498 DNA topoisomerase, type IA, zn finger NDN11_15795 IPR028612 DNA topoisomerase I, type IA NDN11_15795 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type NDN11_15795 IPR005733 DNA topoisomerase I, bacterial-type NDN11_15795 IPR003602 DNA topoisomerase, type IA, DNA-binding domain NDN11_15795 IPR023405 DNA topoisomerase, type IA, core domain NDN11_15795 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 NDN11_15795 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 NDN11_15795 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 NDN11_15795 IPR013497 DNA topoisomerase, type IA, central NDN11_15795 IPR023406 DNA topoisomerase, type IA, active site NDN11_15795 IPR003601 DNA topoisomerase, type IA, domain 2 NDN11_15795 IPR000380 DNA topoisomerase, type IA NDN11_15795 IPR006171 TOPRIM domain NDN11_15795 IPR034149 DNA topoisomerase 1, TOPRIM domain NDN11_15805 IPR036390 Winged helix DNA-binding domain superfamily NDN11_15805 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_15805 IPR002577 Helix-turn-helix, HxlR type NDN11_15810 IPR013149 Alcohol dehydrogenase, C-terminal NDN11_15810 IPR036291 NAD(P)-binding domain superfamily NDN11_15810 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site NDN11_15810 IPR011032 GroES-like superfamily NDN11_15810 IPR013154 Alcohol dehydrogenase, N-terminal NDN11_15810 IPR020843 Polyketide synthase, enoylreductase domain NDN11_15810 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 NDN11_15815 IPR007236 SlyX NDN11_15820 IPR032781 ABC-transporter extension domain NDN11_15820 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily NDN11_15820 IPR017871 ABC transporter, conserved site NDN11_15820 IPR003439 ABC transporter-like NDN11_15820 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_15820 IPR003593 AAA+ ATPase domain NDN11_15820 IPR032524 ABC transporter Uup, C-terminal NDN11_15825 IPR002589 Macro domain NDN11_15830 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase NDN11_15830 IPR004960 Bacterial lipid A biosynthesis acyltransferase NDN11_15860 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site NDN11_15860 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type NDN11_15860 IPR012080 Aspartate-semialdehyde dehydrogenase NDN11_15860 IPR036291 NAD(P)-binding domain superfamily NDN11_15860 IPR000534 Semialdehyde dehydrogenase, NAD-binding NDN11_15860 IPR012280 Semialdehyde dehydrogenase, dimerisation domain NDN11_15880 IPR020103 Pseudouridine synthase, catalytic domain superfamily NDN11_15880 IPR001406 Pseudouridine synthase I, TruA NDN11_15880 IPR020095 Pseudouridine synthase I, TruA, C-terminal NDN11_15880 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain NDN11_15890 IPR012340 Nucleic acid-binding, OB-fold NDN11_15890 IPR022967 RNA-binding domain, S1 NDN11_15890 IPR004368 Translation initiation factor IF-1 NDN11_15890 IPR006196 RNA-binding domain, S1, IF1 type NDN11_15905 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site NDN11_15905 IPR024084 Isopropylmalate dehydrogenase-like domain NDN11_15905 IPR004429 Isopropylmalate dehydrogenase NDN11_15915 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NDN11_15915 IPR004431 3-isopropylmalate dehydratase, small subunit NDN11_15915 IPR033940 3-isopropylmalate dehydratase, swivel domain NDN11_15915 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain NDN11_15920 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 NDN11_15920 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain NDN11_15920 IPR018136 Aconitase family, 4Fe-4S cluster binding site NDN11_15920 IPR036008 Aconitase, iron-sulfur domain NDN11_15920 IPR033941 3-Isopropylmalate dehydratase, catalytic domain NDN11_15920 IPR004430 3-isopropylmalate dehydratase, large subunit NDN11_15930 IPR005119 LysR, substrate-binding NDN11_15930 IPR000847 Transcription regulator HTH, LysR NDN11_15930 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_15930 IPR036390 Winged helix DNA-binding domain superfamily NDN11_15950 IPR022927 RNA pyrophosphohydrolase RppH NDN11_15950 IPR015797 NUDIX hydrolase-like domain superfamily NDN11_15950 IPR020084 NUDIX hydrolase, conserved site NDN11_15950 IPR020476 NUDIX hydrolase NDN11_15950 IPR000086 NUDIX hydrolase domain NDN11_15955 IPR006318 Phosphotransferase system, enzyme I-like NDN11_15955 IPR040442 Pyruvate kinase-like domain superfamily NDN11_15955 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily NDN11_15955 IPR036618 PtsI, HPr-binding domain superfamily NDN11_15955 IPR008731 Phosphotransferase system, enzyme I N-terminal NDN11_15955 IPR036637 Phosphohistidine domain superfamily NDN11_15955 IPR000121 PEP-utilising enzyme, C-terminal NDN11_15955 IPR023151 PEP-utilising enzyme, conserved site NDN11_15955 IPR018274 PEP-utilising enzyme, active site NDN11_15955 IPR008279 PEP-utilising enzyme, mobile domain NDN11_15955 IPR029016 GAF-like domain superfamily NDN11_15955 IPR003018 GAF domain NDN11_15965 IPR018028 Catalase, mono-functional, haem-containing NDN11_15965 IPR020835 Catalase superfamily NDN11_15965 IPR040333 Catalase, clade 3 NDN11_15965 IPR024708 Catalase active site NDN11_15965 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 NDN11_15965 IPR011614 Catalase core domain NDN11_15965 IPR037060 Catalase core domain superfamily NDN11_15965 IPR002226 Catalase haem-binding site NDN11_15965 IPR010582 Catalase immune-responsive domain NDN11_15980 IPR001279 Metallo-beta-lactamase NDN11_15980 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NDN11_15980 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D NDN11_15985 IPR005119 LysR, substrate-binding NDN11_15985 IPR036390 Winged helix DNA-binding domain superfamily NDN11_15985 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_15985 IPR000847 Transcription regulator HTH, LysR NDN11_15990 IPR010987 Glutathione S-transferase, C-terminal-like NDN11_15990 IPR036282 Glutathione S-transferase, C-terminal domain superfamily NDN11_15990 IPR040079 Glutathione Transferase family NDN11_15990 IPR004045 Glutathione S-transferase, N-terminal NDN11_15990 IPR036249 Thioredoxin-like superfamily NDN11_16000 IPR023733 Pyrophosphatase PpaX NDN11_16000 IPR023198 Phosphoglycolate phosphatase-like, domain 2 NDN11_16000 IPR006439 HAD hydrolase, subfamily IA NDN11_16000 IPR036412 HAD-like superfamily NDN11_16000 IPR023214 HAD superfamily NDN11_16000 IPR041492 Haloacid dehalogenase-like hydrolase NDN11_16005 IPR020103 Pseudouridine synthase, catalytic domain superfamily NDN11_16005 IPR006225 Pseudouridine synthase, RluC/RluD NDN11_16005 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NDN11_16005 IPR006145 Pseudouridine synthase, RsuA/RluA NDN11_16005 IPR002942 RNA-binding S4 domain NDN11_16005 IPR036986 RNA-binding S4 domain superfamily NDN11_16015 IPR021968 Polyribonucleotide phosphorylase C-terminal NDN11_16015 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G NDN11_16015 IPR028878 Ribonuclease E NDN11_16015 IPR004659 Ribonuclease E/G NDN11_16015 IPR022967 RNA-binding domain, S1 NDN11_16015 IPR003029 S1 domain NDN11_16015 IPR012340 Nucleic acid-binding, OB-fold NDN11_16020 IPR000873 AMP-dependent synthetase/ligase NDN11_16020 IPR042099 AMP-dependent synthetase-like superfamily NDN11_16020 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 NDN11_16020 IPR020845 AMP-binding, conserved site NDN11_16020 IPR025110 AMP-binding enzyme, C-terminal domain NDN11_16035 IPR034505 Anaerobic coproporphyrinogen-III oxidase NDN11_16035 IPR006638 Elp3/MiaB/NifB NDN11_16035 IPR010723 HemN, C-terminal NDN11_16035 IPR004559 Heme chaperone HemW-like NDN11_16035 IPR007197 Radical SAM NDN11_16035 IPR023404 Radical SAM, alpha/beta horseshoe NDN11_16045 IPR002528 Multi antimicrobial extrusion protein NDN11_16050 IPR011009 Protein kinase-like domain superfamily NDN11_16050 IPR000719 Protein kinase domain NDN11_16050 IPR004147 UbiB domain NDN11_16055 IPR042105 Ribosomal protein L31 superfamily NDN11_16055 IPR034704 L28p-like NDN11_16055 IPR002150 Ribosomal protein L31 NDN11_16055 IPR027493 Ribosomal protein L31 type B NDN11_16065 IPR003691 Putative fluoride ion transporter CrcB NDN11_16080 IPR002563 Flavin reductase like domain NDN11_16080 IPR012349 FMN-binding split barrel NDN11_16095 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NDN11_16095 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NDN11_16095 IPR028261 Dihydroprymidine dehydrogenase domain II NDN11_16095 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_16095 IPR023753 FAD/NAD(P)-binding domain NDN11_16095 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 NDN11_16095 IPR009051 Alpha-helical ferredoxin NDN11_16105 IPR005584 DNA gyrase inhibitor YacG NDN11_16105 IPR013088 Zinc finger, NHR/GATA-type NDN11_16115 IPR001279 Metallo-beta-lactamase NDN11_16115 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NDN11_16120 IPR001015 Ferrochelatase NDN11_16120 IPR019772 Ferrochelatase, active site NDN11_16120 IPR033644 Ferrochelatase, C-terminal NDN11_16120 IPR033659 Ferrochelatase, N-terminal NDN11_16130 IPR004391 Glutamate racemase NDN11_16130 IPR001920 Asp/Glu racemase NDN11_16130 IPR033134 Asp/Glu racemase, active site 2 NDN11_16130 IPR015942 Asp/Glu/hydantoin racemase NDN11_16130 IPR018187 Asp/Glu racemase, active site 1 NDN11_16140 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase NDN11_16140 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NDN11_16140 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_16145 IPR022931 Sulfur carrier protein TusA NDN11_16145 IPR001455 TusA-like domain NDN11_16145 IPR036868 TusA-like domain superfamily NDN11_16150 IPR005170 Transporter-associated domain NDN11_16150 IPR036318 FAD-binding, type PCMH-like superfamily NDN11_16150 IPR016169 FAD-binding, type PCMH, subdomain 2 NDN11_16150 IPR000644 CBS domain NDN11_16155 IPR004563 Apolipoprotein N-acyltransferase NDN11_16155 IPR003010 Carbon-nitrogen hydrolase NDN11_16155 IPR036526 Carbon-nitrogen hydrolase superfamily NDN11_16160 IPR002547 tRNA-binding domain NDN11_16160 IPR008231 Probable chaperone CsaA NDN11_16160 IPR012340 Nucleic acid-binding, OB-fold NDN11_16175 IPR010054 General secretion pathway protein G NDN11_16175 IPR012902 Prokaryotic N-terminal methylation site NDN11_16175 IPR013545 Type II secretion system protein G NDN11_16175 IPR000983 Bacterial general secretion pathway protein G-type pilin NDN11_16180 IPR003004 GspF/PilC family NDN11_16180 IPR011850 General secretion pathway protein F NDN11_16180 IPR001992 Type II secretion system conserved site NDN11_16180 IPR018076 Type II secretion system F domain NDN11_16180 IPR042094 Type II secretion system F domain superfamily NDN11_16185 IPR001650 Helicase, C-terminal NDN11_16185 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain NDN11_16185 IPR011545 DEAD/DEAH box helicase domain NDN11_16185 IPR014001 Helicase superfamily 1/2, ATP-binding domain NDN11_16185 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_16185 IPR005259 Primosomal protein N' NDN11_16185 IPR041222 Primosomal protein N', 3' DNA-binding domain NDN11_16185 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily NDN11_16185 IPR041236 Primosomal protein N, C-terminal domain NDN11_16190 IPR003148 Regulator of K+ conductance, N-terminal NDN11_16190 IPR004771 K+/H+ exchanger NDN11_16190 IPR020884 Glutathione-regulated potassium-efflux system protein KefB NDN11_16190 IPR036291 NAD(P)-binding domain superfamily NDN11_16190 IPR006153 Cation/H+ exchanger NDN11_16190 IPR038770 Sodium/solute symporter superfamily NDN11_16195 IPR000397 Heat shock protein Hsp33 NDN11_16195 IPR016154 Heat shock protein Hsp33, C-terminal NDN11_16195 IPR016153 Heat shock protein Hsp33, N-terminal NDN11_16195 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily NDN11_16210 IPR008971 HSP40/DnaJ peptide-binding NDN11_16210 IPR036869 Chaperone J-domain superfamily NDN11_16210 IPR001623 DnaJ domain NDN11_16210 IPR018253 DnaJ domain, conserved site NDN11_16210 IPR023859 DNA-binding protein, curved-DNA NDN11_16210 IPR002939 Chaperone DnaJ, C-terminal NDN11_16215 IPR022835 Chaperone modulatory protein CbpM NDN11_16220 IPR004488 Magnesium/cobalt transport protein CorA NDN11_16220 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB NDN11_16225 IPR001991 Sodium:dicarboxylate symporter NDN11_16225 IPR036458 Sodium:dicarboxylate symporter superfamily NDN11_16225 IPR023954 C4-dicarboxylate transport protein NDN11_16225 IPR018107 Sodium:dicarboxylate symporter, conserved site NDN11_16230 IPR015847 Exoribonuclease, phosphorolytic domain 2 NDN11_16230 IPR036345 Exoribonuclease, PH domain 2 superfamily NDN11_16230 IPR004087 K Homology domain NDN11_16230 IPR001247 Exoribonuclease, phosphorolytic domain 1 NDN11_16230 IPR036612 K Homology domain, type 1 superfamily NDN11_16230 IPR004088 K Homology domain, type 1 NDN11_16230 IPR012340 Nucleic acid-binding, OB-fold NDN11_16230 IPR012162 Polyribonucleotide nucleotidyltransferase NDN11_16230 IPR027408 PNPase/RNase PH domain superfamily NDN11_16230 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain NDN11_16230 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_16230 IPR022967 RNA-binding domain, S1 NDN11_16230 IPR003029 S1 domain NDN11_16235 IPR009068 S15/NS1, RNA-binding NDN11_16235 IPR000589 Ribosomal protein S15 NDN11_16235 IPR005290 Ribosomal protein S15, bacterial-type NDN11_16240 IPR001466 Beta-lactamase-related NDN11_16240 IPR012338 Beta-lactamase/transpeptidase-like NDN11_16245 IPR003593 AAA+ ATPase domain NDN11_16245 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_16245 IPR006344 RecBCD enzyme subunit RecD NDN11_16245 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain NDN11_16245 IPR027785 UvrD-like helicase C-terminal domain NDN11_16250 IPR034739 UvrD/AddA helicase, N-terminal NDN11_16250 IPR011604 Exonuclease, phage-type/RecB, C-terminal NDN11_16250 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_16250 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type NDN11_16250 IPR004586 RecBCD enzyme subunit RecB NDN11_16250 IPR011335 Restriction endonuclease type II-like NDN11_16250 IPR014016 UvrD-like helicase, ATP-binding domain NDN11_16250 IPR014017 UvrD-like DNA helicase, C-terminal NDN11_16250 IPR000212 DNA helicase, UvrD/REP type NDN11_16255 IPR041500 RecC, C-terminal NDN11_16255 IPR006697 RecBCD enzyme subunit RecC NDN11_16255 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_16255 IPR013986 DExx box DNA helicase domain superfamily NDN11_16255 IPR011335 Restriction endonuclease type II-like NDN11_16265 IPR020846 Major facilitator superfamily domain NDN11_16265 IPR036259 MFS transporter superfamily NDN11_16265 IPR004736 MFS transporter, metabolite:H symporter NDN11_16265 IPR005829 Sugar transporter, conserved site NDN11_16265 IPR011701 Major facilitator superfamily NDN11_16270 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_16270 IPR022488 Polyphosphate kinase-2-related NDN11_16280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_16280 IPR004033 UbiE/COQ5 methyltransferase NDN11_16280 IPR023576 UbiE/COQ5 methyltransferase, conserved site NDN11_16290 IPR011009 Protein kinase-like domain superfamily NDN11_16290 IPR004147 UbiB domain NDN11_16290 IPR010232 Probable protein kinase UbiB NDN11_16295 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_16295 IPR002938 FAD-binding domain NDN11_16300 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NDN11_16300 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NDN11_16300 IPR037523 Vicinal oxygen chelate (VOC) domain NDN11_16310 IPR026660 Phosphoribosyl-AMP cyclohydrolase NDN11_16310 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain NDN11_16310 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily NDN11_16325 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal NDN11_16325 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit NDN11_16325 IPR005281 Monovalent cation:proton antiporter, subunit B NDN11_16325 IPR025383 Domain of unknown function DUF4040 NDN11_16325 IPR007182 Na+/H+ antiporter MnhB subunit-related protein NDN11_16325 IPR005663 Monovalent cation proton antiporter subunit A NDN11_16330 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like NDN11_16330 IPR006673 Mnh complex subunit C1 NDN11_16335 IPR004775 Na(+)/H(+) antiporter subunit D1 NDN11_16335 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit NDN11_16340 IPR002758 Na+/H+ antiporter subunit E NDN11_16345 IPR007208 Na(+)/H(+) antiporter subunit F-like NDN11_16350 IPR005133 Na+/H+ antiporter subunit G NDN11_16360 IPR000238 Ribosome-binding factor A NDN11_16360 IPR023799 Ribosome-binding factor A domain superfamily NDN11_16360 IPR015946 K homology domain-like, alpha/beta NDN11_16365 IPR009000 Translation protein, beta-barrel domain superfamily NDN11_16365 IPR036925 Translation initiation factor IF-2, domain 3 superfamily NDN11_16365 IPR015760 Translation initiation factor IF- 2 NDN11_16365 IPR000178 Translation initiation factor aIF-2, bacterial-like NDN11_16365 IPR009061 Putative DNA-binding domain superfamily NDN11_16365 IPR005225 Small GTP-binding protein domain NDN11_16365 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_16365 IPR006847 Translation initiation factor IF-2, N-terminal NDN11_16365 IPR013575 Initiation factor 2 associated domain, bacterial NDN11_16365 IPR000795 Transcription factor, GTP-binding domain NDN11_16365 IPR023115 Translation initiation factor IF- 2, domain 3 NDN11_16370 IPR003029 S1 domain NDN11_16370 IPR010213 Transcription termination factor NusA NDN11_16370 IPR010214 Transcription termination factor NusA, C-terminal duplication NDN11_16370 IPR013735 Transcription factor NusA, N-terminal NDN11_16370 IPR022967 RNA-binding domain, S1 NDN11_16370 IPR030842 Transcription termination/antitermination protein NusA, bacterial NDN11_16370 IPR036555 NusA, N-terminal domain superfamily NDN11_16370 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical NDN11_16370 IPR015946 K homology domain-like, alpha/beta NDN11_16370 IPR009019 K homology domain superfamily, prokaryotic type NDN11_16370 IPR012340 Nucleic acid-binding, OB-fold NDN11_16370 IPR025249 KH domain, NusA-like NDN11_16375 IPR003728 Ribosome maturation factor RimP NDN11_16375 IPR028998 Ribosome maturation factor RimP, C-terminal NDN11_16375 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily NDN11_16375 IPR028989 Ribosome maturation factor RimP, N-terminal NDN11_16375 IPR035956 RimP, N-terminal domain superfamily NDN11_16395 IPR004692 Preprotein translocase SecG subunit NDN11_16400 IPR013785 Aldolase-type TIM barrel NDN11_16400 IPR035990 Triosephosphate isomerase superfamily NDN11_16400 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic NDN11_16400 IPR000652 Triosephosphate isomerase NDN11_16400 IPR020861 Triosephosphate isomerase, active site NDN11_16405 IPR013374 ATPase, type IV, pilus assembly, PilB NDN11_16405 IPR042181 Type II secretion system, protein E, N-terminal NDN11_16405 IPR001482 Type II/IV secretion system protein NDN11_16405 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_16405 IPR007831 General secretory system II, protein E, N-terminal NDN11_16405 IPR037257 General secretory system II, protein E, N-terminal superfamily NDN11_16410 IPR001992 Type II secretion system conserved site NDN11_16410 IPR018076 Type II secretion system F domain NDN11_16410 IPR003004 GspF/PilC family NDN11_16410 IPR042094 Type II secretion system F domain superfamily NDN11_16415 IPR010627 Peptidase A24A, N-terminal NDN11_16415 IPR014032 Peptidase A24A, prepilin type IV, bacterial NDN11_16415 IPR000045 Prepilin type IV endopeptidase, peptidase domain NDN11_16420 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_16420 IPR001977 Dephospho-CoA kinase NDN11_16430 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB NDN11_16430 IPR029028 Alpha/beta knot methyltransferases NDN11_16430 IPR029064 50S ribosomal protein L30e-like NDN11_16430 IPR004441 RNA methyltransferase TrmH family NDN11_16430 IPR001537 tRNA/rRNA methyltransferase, SpoU type NDN11_16430 IPR013123 RNA 2-O ribose methyltransferase, substrate binding NDN11_16430 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NDN11_16435 IPR011051 RmlC-like cupin domain superfamily NDN11_16435 IPR014710 RmlC-like jelly roll fold NDN11_16435 IPR009664 Pyrimidine/purine nucleoside phosphorylase NDN11_16440 IPR003395 RecF/RecN/SMC, N-terminal NDN11_16440 IPR004604 DNA recombination/repair protein RecN NDN11_16440 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_16445 IPR003774 Protein of unknown function UPF0301 NDN11_16450 IPR012337 Ribonuclease H-like superfamily NDN11_16450 IPR005227 Putative pre-16S rRNA nuclease NDN11_16450 IPR006641 YqgF/RNase H-like domain NDN11_16450 IPR037027 YqgF/RNase H-like domain superfamily NDN11_16455 IPR006143 RND efflux pump, membrane fusion protein NDN11_16455 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA NDN11_16455 IPR039562 Membrane fusion protein, biotin-lipoyl like domain NDN11_16480 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial NDN11_16480 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase NDN11_16480 IPR000462 CDP-alcohol phosphatidyltransferase NDN11_16490 IPR000305 GIY-YIG endonuclease NDN11_16490 IPR035901 GIY-YIG endonuclease superfamily NDN11_16490 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 NDN11_16490 IPR010994 RuvA domain 2-like NDN11_16490 IPR001943 UVR domain NDN11_16490 IPR036876 UVR domain superfamily NDN11_16490 IPR001162 UvrC family homology region NDN11_16490 IPR038476 UvrC homology region 2 superfamily NDN11_16490 IPR004791 UvrABC system, subunit C NDN11_16505 IPR012799 Fatty oxidation complex, alpha subunit FadB NDN11_16505 IPR001753 Enoyl-CoA hydratase/isomerase NDN11_16505 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NDN11_16505 IPR036291 NAD(P)-binding domain superfamily NDN11_16505 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_16505 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal NDN11_16505 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding NDN11_16505 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site NDN11_16505 IPR029045 ClpP/crotonase-like domain superfamily NDN11_16510 IPR012805 Acetyl-CoA C-acyltransferase FadA NDN11_16510 IPR002155 Thiolase NDN11_16510 IPR016039 Thiolase-like NDN11_16510 IPR020615 Thiolase, acyl-enzyme intermediate active site NDN11_16510 IPR020610 Thiolase, active site NDN11_16510 IPR020617 Thiolase, C-terminal NDN11_16510 IPR020613 Thiolase, conserved site NDN11_16510 IPR020616 Thiolase, N-terminal NDN11_16525 IPR015358 Transcription regulator MerR, DNA binding NDN11_16525 IPR011789 Cu(I)-responsive transcriptional regulator NDN11_16525 IPR009061 Putative DNA-binding domain superfamily NDN11_16525 IPR000551 MerR-type HTH domain NDN11_16535 IPR003593 AAA+ ATPase domain NDN11_16535 IPR011527 ABC transporter type 1, transmembrane domain NDN11_16535 IPR036640 ABC transporter type 1, transmembrane domain superfamily NDN11_16535 IPR003439 ABC transporter-like NDN11_16535 IPR017871 ABC transporter, conserved site NDN11_16535 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_16535 IPR039421 Type I protein exporter NDN11_16545 IPR001853 DSBA-like thioredoxin domain NDN11_16545 IPR036249 Thioredoxin-like superfamily NDN11_16565 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_16565 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_16565 IPR037196 HSP90, C-terminal domain NDN11_16565 IPR001404 Heat shock protein Hsp90 family NDN11_16565 IPR020575 Heat shock protein Hsp90, N-terminal NDN11_16565 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_16580 IPR032813 Putative Na+/H+ antiporter, N-terminal NDN11_16580 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal NDN11_16605 IPR000722 RNA polymerase, alpha subunit NDN11_16605 IPR006592 RNA polymerase, N-terminal NDN11_16605 IPR007080 RNA polymerase Rpb1, domain 1 NDN11_16605 IPR007066 RNA polymerase Rpb1, domain 3 NDN11_16605 IPR042102 RNA polymerase Rpb1, domain 3 superfamily NDN11_16605 IPR012754 DNA-directed RNA polymerase, subunit beta-prime NDN11_16605 IPR007081 RNA polymerase Rpb1, domain 5 NDN11_16605 IPR038120 RNA polymerase Rpb1, funnel domain superfamily NDN11_16605 IPR007083 RNA polymerase Rpb1, domain 4 NDN11_16610 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily NDN11_16610 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain NDN11_16610 IPR014724 RNA polymerase Rpb2, OB-fold NDN11_16610 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily NDN11_16610 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type NDN11_16610 IPR007121 RNA polymerase, beta subunit, conserved site NDN11_16610 IPR007644 RNA polymerase, beta subunit, protrusion NDN11_16610 IPR007642 RNA polymerase Rpb2, domain 2 NDN11_16610 IPR037034 RNA polymerase Rpb2, domain 2 superfamily NDN11_16610 IPR007645 RNA polymerase Rpb2, domain 3 NDN11_16610 IPR007641 RNA polymerase Rpb2, domain 7 NDN11_16610 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain NDN11_16610 IPR015712 DNA-directed RNA polymerase, subunit 2 NDN11_16615 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily NDN11_16615 IPR000206 Ribosomal protein L7/L12 NDN11_16615 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NDN11_16615 IPR013823 Ribosomal protein L7/L12, C-terminal NDN11_16615 IPR008932 Ribosomal protein L7/L12, oligomerisation NDN11_16620 IPR022973 Ribosomal protein L10 NDN11_16620 IPR002363 Ribosomal protein L10, eubacterial, conserved site NDN11_16620 IPR001790 Ribosomal protein L10P NDN11_16625 IPR023673 Ribosomal protein L1, conserved site NDN11_16625 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich NDN11_16625 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein NDN11_16625 IPR002143 Ribosomal protein L1 NDN11_16625 IPR005878 Ribosomal protein L1, bacterial-type NDN11_16625 IPR023674 Ribosomal protein L1-like NDN11_16630 IPR036769 Ribosomal protein L11, C-terminal domain superfamily NDN11_16630 IPR000911 Ribosomal protein L11/L12 NDN11_16630 IPR006519 Ribosomal protein L11, bacterial-type NDN11_16630 IPR020783 Ribosomal protein L11, C-terminal NDN11_16630 IPR020785 Ribosomal protein L11, conserved site NDN11_16630 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily NDN11_16630 IPR020784 Ribosomal protein L11, N-terminal NDN11_16635 IPR005824 KOW NDN11_16635 IPR006645 NusG, N-terminal NDN11_16635 IPR036735 NusG, N-terminal domain superfamily NDN11_16635 IPR014722 Ribosomal protein L2, domain 2 NDN11_16635 IPR001062 Transcription antitermination protein, NusG NDN11_16635 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site NDN11_16635 IPR008991 Translation protein SH3-like domain superfamily NDN11_16640 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit NDN11_16640 IPR038379 SecE superfamily NDN11_16640 IPR005807 SecE subunit of protein translocation complex, bacterial-like NDN11_16650 IPR004161 Translation elongation factor EFTu-like, domain 2 NDN11_16650 IPR033720 Elongation factor Tu, domain 2 NDN11_16650 IPR031157 Tr-type G domain, conserved site NDN11_16650 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_16650 IPR005225 Small GTP-binding protein domain NDN11_16650 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain NDN11_16650 IPR009000 Translation protein, beta-barrel domain superfamily NDN11_16650 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NDN11_16650 IPR000795 Transcription factor, GTP-binding domain NDN11_16650 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle NDN11_16650 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal NDN11_16675 IPR015890 Chorismate-utilising enzyme, C-terminal NDN11_16675 IPR005801 ADC synthase NDN11_16675 IPR005256 Anthranilate synthase component I, PabB-like NDN11_16675 IPR006805 Anthranilate synthase component I, N-terminal NDN11_16675 IPR019999 Anthranilate synthase component I-like NDN11_16680 IPR006439 HAD hydrolase, subfamily IA NDN11_16680 IPR036412 HAD-like superfamily NDN11_16680 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic NDN11_16680 IPR023214 HAD superfamily NDN11_16680 IPR037512 Phosphoglycolate phosphatase, prokaryotic NDN11_16680 IPR023198 Phosphoglycolate phosphatase-like, domain 2 NDN11_16680 IPR041492 Haloacid dehalogenase-like hydrolase NDN11_16685 IPR008984 SMAD/FHA domain superfamily NDN11_16685 IPR000253 Forkhead-associated (FHA) domain NDN11_16685 IPR042287 FhaA, N-terminal NDN11_16685 IPR022128 Domain of unknown function DUF3662 NDN11_16690 IPR013356 Type II secretion system GspD NDN11_16690 IPR004845 Type II secretion system GspD, conserved site NDN11_16690 IPR038591 NolW-like superfamily NDN11_16690 IPR005644 NolW-like NDN11_16690 IPR001775 GspD/PilQ family NDN11_16690 IPR004846 Type II/III secretion system NDN11_16705 IPR027444 Histone-like protein H-NS, C-terminal domain NDN11_16705 IPR001801 Histone-like protein H-NS NDN11_16705 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily NDN11_16730 IPR000860 Porphobilinogen deaminase NDN11_16730 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site NDN11_16730 IPR022417 Porphobilinogen deaminase, N-terminal NDN11_16730 IPR022418 Porphobilinogen deaminase, C-terminal NDN11_16730 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily NDN11_16735 IPR007492 LytTR DNA-binding domain NDN11_16735 IPR001789 Signal transduction response regulator, receiver domain NDN11_16735 IPR011006 CheY-like superfamily NDN11_16740 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_16740 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_16740 IPR010559 Signal transduction histidine kinase, internal region NDN11_16740 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region NDN11_16740 IPR029016 GAF-like domain superfamily NDN11_16745 IPR029419 Argininosuccinate lyase, C-terminal NDN11_16745 IPR009049 Argininosuccinate lyase NDN11_16745 IPR024083 Fumarase/histidase, N-terminal NDN11_16745 IPR020557 Fumarate lyase, conserved site NDN11_16745 IPR000362 Fumarate lyase family NDN11_16745 IPR022761 Fumarate lyase, N-terminal NDN11_16745 IPR008948 L-Aspartase-like NDN11_16750 IPR007457 Fe(II) trafficking protein YggX NDN11_16750 IPR036766 Fe(II) trafficking protein YggX superfamily NDN11_16755 IPR026022 PhoU domain NDN11_16755 IPR028366 Phosphate transport system protein PhoU NDN11_16755 IPR038078 PhoU-like domain superfamily NDN11_16760 IPR037509 Phosphomethylpyrimidine synthase NDN11_16760 IPR025747 ThiC-associated domain NDN11_16760 IPR038521 ThiC/Bza superfamily NDN11_16760 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B NDN11_16765 IPR004385 Nucleoside diphosphate pyrophosphatase NDN11_16765 IPR015797 NUDIX hydrolase-like domain superfamily NDN11_16765 IPR020084 NUDIX hydrolase, conserved site NDN11_16765 IPR000086 NUDIX hydrolase domain NDN11_16770 IPR029052 Metallo-dependent phosphatase-like NDN11_16770 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type NDN11_16770 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA NDN11_16775 IPR012784 RNA polymerase-binding transcription factor DksA NDN11_16775 IPR037187 DksA, N-terminal domain superfamily NDN11_16775 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria NDN11_16775 IPR000962 Zinc finger, DksA/TraR C4-type NDN11_16775 IPR020458 Zinc finger, DksA/TraR C4-type conserved site NDN11_16780 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_16780 IPR000924 Glutamyl/glutaminyl-tRNA synthetase NDN11_16780 IPR022380 Glutamyl-Q tRNA(Asp) synthetase NDN11_16780 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain NDN11_16785 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA NDN11_16785 IPR013437 Probable peptidoglycan glycosyltransferase FtsW NDN11_16785 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site NDN11_16790 IPR036565 Mur-like, catalytic domain superfamily NDN11_16790 IPR004101 Mur ligase, C-terminal NDN11_16790 IPR036615 Mur ligase, C-terminal domain superfamily NDN11_16790 IPR013221 Mur ligase, central NDN11_16790 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase NDN11_16805 IPR003373 Ferrous iron transport protein B NDN11_16805 IPR011640 Ferrous iron transport protein B, C-terminal NDN11_16805 IPR030389 FeoB-type guanine nucleotide-binding (G) domain NDN11_16805 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain NDN11_16805 IPR006073 GTP binding domain NDN11_16805 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_16815 IPR023009 Tyrosine recombinase XerC/XerD NDN11_16815 IPR011932 Tyrosine recombinase XerD NDN11_16815 IPR004107 Integrase, SAM-like, N-terminal NDN11_16815 IPR013762 Integrase-like, catalytic domain superfamily NDN11_16815 IPR011010 DNA breaking-rejoining enzyme, catalytic core NDN11_16815 IPR002104 Integrase, catalytic domain NDN11_16815 IPR010998 Integrase/recombinase, N-terminal NDN11_16820 IPR033954 Disulphide bond isomerase, DsbC/G NDN11_16820 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal NDN11_16820 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily NDN11_16820 IPR012336 Thioredoxin-like fold NDN11_16820 IPR036249 Thioredoxin-like superfamily NDN11_16820 IPR017937 Thioredoxin, conserved site NDN11_16820 IPR013766 Thioredoxin domain NDN11_16825 IPR002912 ACT domain NDN11_16825 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding NDN11_16825 IPR016204 Homoserine dehydrogenase NDN11_16825 IPR019811 Homoserine dehydrogenase, conserved site NDN11_16825 IPR036291 NAD(P)-binding domain superfamily NDN11_16825 IPR001342 Homoserine dehydrogenase, catalytic NDN11_16830 IPR001926 Pyridoxal-phosphate dependent enzyme NDN11_16830 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NDN11_16830 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site NDN11_16830 IPR004450 Threonine synthase-like NDN11_16830 IPR026260 Threonine synthase, bacterial/archaeal NDN11_16845 IPR012338 Beta-lactamase/transpeptidase-like NDN11_16845 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A NDN11_16845 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal NDN11_16850 IPR011006 CheY-like superfamily NDN11_16850 IPR016032 Signal transduction response regulator, C-terminal effector NDN11_16850 IPR001789 Signal transduction response regulator, receiver domain NDN11_16850 IPR000792 Transcription regulator LuxR, C-terminal NDN11_16855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_16855 IPR000014 PAS domain NDN11_16855 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_16855 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_16855 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_16855 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_16855 IPR005467 Histidine kinase domain NDN11_16860 IPR003593 AAA+ ATPase domain NDN11_16860 IPR011006 CheY-like superfamily NDN11_16860 IPR002197 DNA binding HTH domain, Fis-type NDN11_16860 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_16860 IPR001789 Signal transduction response regulator, receiver domain NDN11_16860 IPR002078 RNA polymerase sigma factor 54 interaction domain NDN11_16860 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NDN11_16860 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NDN11_16860 IPR009057 Homeobox-like domain superfamily NDN11_16860 IPR025944 Sigma-54 interaction domain, conserved site NDN11_16865 IPR029045 ClpP/crotonase-like domain superfamily NDN11_16865 IPR005151 Tail specific protease NDN11_16865 IPR036366 PGBD superfamily NDN11_16865 IPR036365 PGBD-like superfamily NDN11_16865 IPR001478 PDZ domain NDN11_16865 IPR004447 C-terminal-processing peptidase S41A NDN11_16865 IPR036034 PDZ superfamily NDN11_16865 IPR002477 Peptidoglycan binding-like NDN11_16865 IPR041489 PDZ domain 6 NDN11_16870 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily NDN11_16870 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent NDN11_16870 IPR011258 BPG-independent PGAM, N-terminal NDN11_16870 IPR017850 Alkaline-phosphatase-like, core domain superfamily NDN11_16870 IPR006124 Metalloenzyme NDN11_16875 IPR030923 LPS export ABC transporter permease LptG NDN11_16875 IPR005495 Permease LptG/LptF-related NDN11_16880 IPR005495 Permease LptG/LptF-related NDN11_16880 IPR030922 LPS export ABC transporter permease LptF NDN11_16885 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B NDN11_16885 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal NDN11_16885 IPR023042 Peptidase M17, leucine aminopeptidase NDN11_16885 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal NDN11_16900 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily NDN11_16900 IPR026017 Lumazine-binding domain NDN11_16900 IPR017938 Riboflavin synthase-like beta-barrel NDN11_16900 IPR001783 Lumazine-binding protein NDN11_16905 IPR023271 Aquaporin-like NDN11_16905 IPR000425 Major intrinsic protein NDN11_16905 IPR022357 Major intrinsic protein, conserved site NDN11_16915 IPR004794 Riboflavin biosynthesis protein RibD NDN11_16915 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal NDN11_16915 IPR011549 Riboflavin-specific deaminase, C-terminal NDN11_16915 IPR016192 APOBEC/CMP deaminase, zinc-binding NDN11_16915 IPR002125 Cytidine and deoxycytidylate deaminase domain NDN11_16915 IPR016193 Cytidine deaminase-like NDN11_16915 IPR024072 Dihydrofolate reductase-like domain superfamily NDN11_16920 IPR005144 ATP-cone domain NDN11_16920 IPR003796 Ribonucleotide reductase regulator NrdR-like NDN11_16925 IPR024041 Ammonium transporter AmtB-like domain NDN11_16925 IPR018047 Ammonium transporter, conserved site NDN11_16925 IPR029020 Ammonium/urea transporter NDN11_16925 IPR001905 Ammonium transporter NDN11_16930 IPR002187 Nitrogen regulatory protein PII NDN11_16930 IPR011322 Nitrogen regulatory PII-like, alpha/beta NDN11_16930 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal NDN11_16930 IPR017918 Nitrogen regulatory protein PII, conserved site NDN11_16930 IPR002332 Nitrogen regulatory protein P-II, urydylation site NDN11_16940 IPR003593 AAA+ ATPase domain NDN11_16940 IPR004482 Mg chelatase-related protein NDN11_16940 IPR025158 Mg chelatase-related protein, C-terminal domain NDN11_16940 IPR000523 Magnesium chelatase ChlI domain NDN11_16940 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_16940 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NDN11_16940 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_16950 IPR002781 Transmembrane protein TauE-like NDN11_16965 IPR036649 Inorganic pyrophosphatase superfamily NDN11_16965 IPR008162 Inorganic pyrophosphatase NDN11_16980 IPR025110 AMP-binding enzyme, C-terminal domain NDN11_16980 IPR000873 AMP-dependent synthetase/ligase NDN11_16980 IPR042099 AMP-dependent synthetase-like superfamily NDN11_16980 IPR020845 AMP-binding, conserved site NDN11_16985 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat NDN11_16985 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily NDN11_16985 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative NDN11_16985 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal NDN11_16985 IPR013760 DNA topoisomerase, type IIA-like domain superfamily NDN11_16985 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal NDN11_16985 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta NDN11_16990 IPR005115 Uncharacterised domain UPF0126 NDN11_16995 IPR004027 SEC-C motif NDN11_16995 IPR023006 Uncharacterised protein family UPF0225 NDN11_16995 IPR032710 NTF2-like domain superfamily NDN11_17000 IPR000644 CBS domain NDN11_17000 IPR036318 FAD-binding, type PCMH-like superfamily NDN11_17000 IPR016169 FAD-binding, type PCMH, subdomain 2 NDN11_17000 IPR005496 Integral membrane protein TerC NDN11_17000 IPR005170 Transporter-associated domain NDN11_17005 IPR031100 LOG family NDN11_17005 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG NDN11_17015 IPR011701 Major facilitator superfamily NDN11_17015 IPR020846 Major facilitator superfamily domain NDN11_17015 IPR036259 MFS transporter superfamily NDN11_17015 IPR023721 Multidrug resistance protein MdtD NDN11_17015 IPR004638 Drug resistance transporter EmrB-like NDN11_17030 IPR036775 DNA polymerase, Y-family, little finger domain superfamily NDN11_17030 IPR017961 DNA polymerase, Y-family, little finger domain NDN11_17030 IPR022880 DNA polymerase IV NDN11_17030 IPR024728 DNA polymerase type-Y, HhH motif NDN11_17030 IPR001126 UmuC domain NDN11_17035 IPR039420 Transcriptional regulatory protein WalR-like NDN11_17035 IPR011006 CheY-like superfamily NDN11_17035 IPR001867 OmpR/PhoB-type DNA-binding domain NDN11_17035 IPR001789 Signal transduction response regulator, receiver domain NDN11_17035 IPR016032 Signal transduction response regulator, C-terminal effector NDN11_17035 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_17040 IPR003660 HAMP domain NDN11_17040 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_17040 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_17040 IPR005467 Histidine kinase domain NDN11_17040 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_17040 IPR029151 Periplasmic sensor-like domain superfamily NDN11_17040 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_17040 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_17045 IPR010364 Uncharacterised protein family, inner membrane CreD NDN11_17065 IPR024560 Uncharacterised protein family UPF0313, C-terminal NDN11_17065 IPR020612 Methylthiotransferase, conserved site NDN11_17065 IPR022946 Uncharacterised protein family UPF0313 NDN11_17065 IPR006638 Elp3/MiaB/NifB NDN11_17065 IPR013704 Uncharacterised protein family UPF0313, N-terminal NDN11_17065 IPR007197 Radical SAM NDN11_17065 IPR023404 Radical SAM, alpha/beta horseshoe NDN11_17075 IPR012910 TonB-dependent receptor, plug domain NDN11_17075 IPR037066 TonB-dependent receptor, plug domain superfamily NDN11_17075 IPR039423 TonB-dependent receptor-like NDN11_17075 IPR000531 TonB-dependent receptor-like, beta-barrel NDN11_17075 IPR010917 TonB-dependent receptor, conserved site NDN11_17075 IPR010105 TonB-dependent siderophore receptor NDN11_17075 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily NDN11_17080 IPR005829 Sugar transporter, conserved site NDN11_17080 IPR011701 Major facilitator superfamily NDN11_17080 IPR020846 Major facilitator superfamily domain NDN11_17080 IPR036259 MFS transporter superfamily NDN11_17090 IPR011788 Zn(II)-responsive transcriptional regulator NDN11_17090 IPR000551 MerR-type HTH domain NDN11_17090 IPR009061 Putative DNA-binding domain superfamily NDN11_17100 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic NDN11_17100 IPR008254 Flavodoxin/nitric oxide synthase NDN11_17100 IPR005025 NADPH-dependent FMN reductase-like NDN11_17100 IPR010089 Flavoprotein WrbA-like NDN11_17100 IPR029039 Flavoprotein-like superfamily NDN11_17120 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site NDN11_17120 IPR001926 Pyridoxal-phosphate dependent enzyme NDN11_17120 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme NDN11_17120 IPR005859 Cysteine synthase CysK NDN11_17120 IPR005856 Cysteine synthase NDN11_17155 IPR018093 BCCT transporter, conserved site NDN11_17155 IPR000060 BCCT transporter family NDN11_17160 IPR003673 CoA-transferase family III NDN11_17160 IPR023606 CoA-transferase family III domain superfamily NDN11_17165 IPR005829 Sugar transporter, conserved site NDN11_17165 IPR020846 Major facilitator superfamily domain NDN11_17165 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family NDN11_17165 IPR011701 Major facilitator superfamily NDN11_17165 IPR036259 MFS transporter superfamily NDN11_17170 IPR006089 Acyl-CoA dehydrogenase, conserved site NDN11_17170 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_17170 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NDN11_17170 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_17170 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_17170 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_17170 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_17175 IPR005119 LysR, substrate-binding NDN11_17175 IPR000847 Transcription regulator HTH, LysR NDN11_17175 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_17175 IPR036390 Winged helix DNA-binding domain superfamily NDN11_17195 IPR014083 Cation/acetate symporter ActP NDN11_17195 IPR001734 Sodium/solute symporter NDN11_17195 IPR038377 Sodium/glucose symporter superfamily NDN11_17195 IPR018212 Sodium/solute symporter, conserved site NDN11_17200 IPR007436 Protein of unknown function DUF485 NDN11_17205 IPR011006 CheY-like superfamily NDN11_17205 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal NDN11_17205 IPR004358 Signal transduction histidine kinase-related protein, C-terminal NDN11_17205 IPR038388 RcsC, C-terminal domain superfamily NDN11_17205 IPR001789 Signal transduction response regulator, receiver domain NDN11_17205 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily NDN11_17205 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain NDN11_17205 IPR005467 Histidine kinase domain NDN11_17205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily NDN11_17205 IPR003594 Histidine kinase/HSP90-like ATPase NDN11_17205 IPR030856 Sensor histidine kinase RcsC NDN11_17225 IPR023635 Peptide deformylase NDN11_17225 IPR036821 Peptide deformylase superfamily NDN11_17230 IPR018392 LysM domain NDN11_17230 IPR036779 LysM domain superfamily NDN11_17235 IPR003488 DNA recombination-mediator protein A NDN11_17235 IPR041614 DprA, winged helix domain NDN11_17235 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_17240 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily NDN11_17240 IPR006070 YrdC-like domain NDN11_17240 IPR023535 Threonylcarbamoyl-AMP synthase NDN11_17250 IPR001647 DNA-binding HTH domain, TetR-type NDN11_17250 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NDN11_17250 IPR009057 Homeobox-like domain superfamily NDN11_17255 IPR011701 Major facilitator superfamily NDN11_17255 IPR020846 Major facilitator superfamily domain NDN11_17255 IPR036259 MFS transporter superfamily NDN11_17260 IPR011701 Major facilitator superfamily NDN11_17260 IPR020846 Major facilitator superfamily domain NDN11_17260 IPR036259 MFS transporter superfamily NDN11_17270 IPR000889 Glutathione peroxidase NDN11_17270 IPR029759 Glutathione peroxidase active site NDN11_17270 IPR029760 Glutathione peroxidase conserved site NDN11_17270 IPR036249 Thioredoxin-like superfamily NDN11_17270 IPR033674 Thioredoxin/glutathione peroxidase BtuE NDN11_17285 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily NDN11_17285 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit NDN11_17285 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal NDN11_17285 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal NDN11_17290 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_17290 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain NDN11_17290 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily NDN11_17290 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal NDN11_17290 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site NDN11_17290 IPR005722 ATP synthase, F1 complex, beta subunit NDN11_17290 IPR003593 AAA+ ATPase domain NDN11_17290 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain NDN11_17295 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily NDN11_17295 IPR000131 ATP synthase, F1 complex, gamma subunit NDN11_17295 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site NDN11_17300 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily NDN11_17300 IPR000793 ATP synthase, alpha subunit, C-terminal NDN11_17300 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily NDN11_17300 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain NDN11_17300 IPR005294 ATP synthase, F1 complex, alpha subunit NDN11_17300 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site NDN11_17300 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain NDN11_17300 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily NDN11_17300 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_17300 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain NDN11_17305 IPR020781 ATPase, OSCP/delta subunit, conserved site NDN11_17305 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily NDN11_17305 IPR000711 ATPase, OSCP/delta subunit NDN11_17310 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily NDN11_17310 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast NDN11_17310 IPR005864 ATP synthase, F0 complex, subunit b, bacterial NDN11_17315 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast NDN11_17315 IPR000454 ATP synthase, F0 complex, subunit C NDN11_17315 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site NDN11_17315 IPR038662 F1F0 ATP synthase subunit C superfamily NDN11_17315 IPR002379 V-ATPase proteolipid subunit C-like domain NDN11_17315 IPR035921 F/V-ATP synthase subunit C superfamily NDN11_17320 IPR035908 ATP synthase, F0 complex, subunit A superfamily NDN11_17320 IPR000568 ATP synthase, F0 complex, subunit A NDN11_17320 IPR023011 ATP synthase, F0 complex, subunit A, active site NDN11_17340 IPR003593 AAA+ ATPase domain NDN11_17340 IPR003439 ABC transporter-like NDN11_17340 IPR017871 ABC transporter, conserved site NDN11_17340 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_17340 IPR017882 Zinc import ATP-binding protein ZnuC NDN11_17345 IPR037294 ABC transporter, BtuC-like NDN11_17345 IPR001626 ABC transporter, TroCD-like NDN11_17350 IPR004778 Homoserine/Threonine efflux protein NDN11_17350 IPR001123 Amino acid exporter protein, LeuE-type NDN11_17355 IPR011008 Dimeric alpha-beta barrel NDN11_17355 IPR006314 Dyp-type peroxidase NDN11_17360 IPR001278 Arginine-tRNA ligase NDN11_17360 IPR005148 Arginyl tRNA synthetase N-terminal domain NDN11_17360 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily NDN11_17360 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding NDN11_17360 IPR008909 DALR anticodon binding NDN11_17360 IPR035684 Arginyl-tRNA synthetase, catalytic core domain NDN11_17380 IPR012093 Pirin NDN11_17380 IPR008778 Pirin, C-terminal domain NDN11_17380 IPR003829 Pirin, N-terminal domain NDN11_17380 IPR014710 RmlC-like jelly roll fold NDN11_17380 IPR011051 RmlC-like cupin domain superfamily NDN11_17395 IPR002481 Ferric-uptake regulator NDN11_17395 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_17395 IPR036390 Winged helix DNA-binding domain superfamily NDN11_17400 IPR005149 Transcription regulator PadR, N-terminal NDN11_17400 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_17400 IPR036390 Winged helix DNA-binding domain superfamily NDN11_17410 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_17410 IPR022310 NAD/GMP synthase NDN11_17410 IPR022955 GMP synthase NDN11_17410 IPR004739 GMP synthase, glutamine amidotransferase NDN11_17410 IPR001674 GMP synthase, C-terminal NDN11_17410 IPR017926 Glutamine amidotransferase NDN11_17410 IPR029062 Class I glutamine amidotransferase-like NDN11_17410 IPR025777 GMP synthetase ATP pyrophosphatase domain NDN11_17415 IPR007383 Protein of unknown function DUF445 NDN11_17415 IPR016991 Protein of unknown function UCP032178 NDN11_17420 IPR036700 Bacterial OB-fold superfamily NDN11_17420 IPR005220 Bacterial OB-fold NDN11_17420 IPR016052 Bacteriophage 933W, L0136 NDN11_17425 IPR032808 DoxX family NDN11_17430 IPR032818 DedA family NDN11_17430 IPR032816 SNARE associated Golgi protein NDN11_17445 IPR025669 AAA domain NDN11_17445 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_17455 IPR002634 BolA protein NDN11_17455 IPR036065 BolA-like superfamily NDN11_17470 IPR011701 Major facilitator superfamily NDN11_17470 IPR020846 Major facilitator superfamily domain NDN11_17470 IPR005828 Major facilitator, sugar transporter-like NDN11_17470 IPR036259 MFS transporter superfamily NDN11_17470 IPR004736 MFS transporter, metabolite:H symporter NDN11_17470 IPR005829 Sugar transporter, conserved site NDN11_17480 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site NDN11_17480 IPR029045 ClpP/crotonase-like domain superfamily NDN11_17480 IPR014748 Enoyl-CoA hydratase, C-terminal NDN11_17480 IPR001753 Enoyl-CoA hydratase/isomerase NDN11_17485 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_17485 IPR006089 Acyl-CoA dehydrogenase, conserved site NDN11_17485 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_17485 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_17485 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NDN11_17485 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_17485 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_17490 IPR042099 AMP-dependent synthetase-like superfamily NDN11_17490 IPR000873 AMP-dependent synthetase/ligase NDN11_17490 IPR020845 AMP-binding, conserved site NDN11_17490 IPR025110 AMP-binding enzyme, C-terminal domain NDN11_17495 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding NDN11_17495 IPR013328 6-phosphogluconate dehydrogenase, domain 2 NDN11_17495 IPR036291 NAD(P)-binding domain superfamily NDN11_17495 IPR015815 3-hydroxyisobutyrate dehydrogenase-related NDN11_17495 IPR011548 3-hydroxyisobutyrate dehydrogenase NDN11_17495 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site NDN11_17495 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_17495 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain NDN11_17500 IPR010061 Methylmalonate-semialdehyde dehydrogenase NDN11_17500 IPR015590 Aldehyde dehydrogenase domain NDN11_17500 IPR016162 Aldehyde dehydrogenase, N-terminal NDN11_17500 IPR016160 Aldehyde dehydrogenase, cysteine active site NDN11_17500 IPR016161 Aldehyde/histidinol dehydrogenase NDN11_17500 IPR016163 Aldehyde dehydrogenase, C-terminal NDN11_17505 IPR005119 LysR, substrate-binding NDN11_17505 IPR036390 Winged helix DNA-binding domain superfamily NDN11_17505 IPR000847 Transcription regulator HTH, LysR NDN11_17505 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_17510 IPR004840 Amino acid permease, conserved site NDN11_17510 IPR004841 Amino acid permease/ SLC12A domain NDN11_17515 IPR035709 RutC family, YoaB-like NDN11_17515 IPR019897 RidA, conserved site NDN11_17515 IPR006175 YjgF/YER057c/UK114 family NDN11_17515 IPR035959 RutC-like superfamily NDN11_17520 IPR011079 Alanine racemase, C-terminal NDN11_17520 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal NDN11_17520 IPR000821 Alanine racemase NDN11_17520 IPR001608 Alanine racemase, N-terminal NDN11_17520 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site NDN11_17520 IPR029066 PLP-binding barrel NDN11_17525 IPR023080 D-amino acid dehydrogenase DadA NDN11_17525 IPR006076 FAD dependent oxidoreductase NDN11_17525 IPR036188 FAD/NAD(P)-binding domain superfamily NDN11_17530 IPR011991 ArsR-like helix-turn-helix domain NDN11_17530 IPR000485 AsnC-type HTH domain NDN11_17530 IPR011008 Dimeric alpha-beta barrel NDN11_17530 IPR019888 Transcription regulator AsnC-type NDN11_17530 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NDN11_17530 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NDN11_17530 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_17530 IPR036390 Winged helix DNA-binding domain superfamily NDN11_17540 IPR016181 Acyl-CoA N-acyltransferase NDN11_17540 IPR000182 GNAT domain NDN11_17545 IPR006145 Pseudouridine synthase, RsuA/RluA NDN11_17545 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site NDN11_17545 IPR020103 Pseudouridine synthase, catalytic domain superfamily NDN11_17545 IPR006225 Pseudouridine synthase, RluC/RluD NDN11_17585 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent NDN11_17585 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 NDN11_17585 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain NDN11_17585 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NDN11_17585 IPR006249 Aconitase/Iron-responsive element-binding protein 2 NDN11_17585 IPR036008 Aconitase, iron-sulfur domain NDN11_17585 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain NDN11_17590 IPR011278 2-methylcitrate synthase/citrate synthase type I NDN11_17590 IPR016142 Citrate synthase-like, large alpha subdomain NDN11_17590 IPR002020 Citrate synthase NDN11_17590 IPR019810 Citrate synthase active site NDN11_17590 IPR024176 Citrate synthase, bacterial-type NDN11_17590 IPR036969 Citrate synthase superfamily NDN11_17590 IPR016143 Citrate synthase-like, small alpha subdomain NDN11_17595 IPR039556 ICL/PEPM domain NDN11_17595 IPR012695 2-methylisocitrate lyase NDN11_17595 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily NDN11_17595 IPR040442 Pyruvate kinase-like domain superfamily NDN11_17595 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site NDN11_17600 IPR036390 Winged helix DNA-binding domain superfamily NDN11_17600 IPR000524 Transcription regulator HTH, GntR NDN11_17600 IPR008920 Transcription regulator FadR/GntR, C-terminal NDN11_17600 IPR011711 GntR, C-terminal NDN11_17600 IPR000485 AsnC-type HTH domain NDN11_17600 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_17605 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_17605 IPR004839 Aminotransferase, class I/classII NDN11_17605 IPR000796 Aspartate/other aminotransferase NDN11_17605 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site NDN11_17605 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_17605 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_17610 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 NDN11_17610 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 NDN11_17610 IPR016166 FAD-binding domain, PCMH-type NDN11_17610 IPR036318 FAD-binding, type PCMH-like superfamily NDN11_17610 IPR006094 FAD linked oxidase, N-terminal NDN11_17610 IPR016169 FAD-binding, type PCMH, subdomain 2 NDN11_17610 IPR016164 FAD-linked oxidase-like, C-terminal NDN11_17610 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal NDN11_17610 IPR016167 FAD-binding, type PCMH, subdomain 1 NDN11_17610 IPR012256 D-lactate dehydrogenase NDN11_17615 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent NDN11_17615 IPR013785 Aldolase-type TIM barrel NDN11_17615 IPR000262 FMN-dependent dehydrogenase NDN11_17615 IPR020920 L-lactate dehydrogenase, bacterial NDN11_17615 IPR037396 FMN hydroxy acid dehydrogenase domain NDN11_17615 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site NDN11_17620 IPR011711 GntR, C-terminal NDN11_17620 IPR008920 Transcription regulator FadR/GntR, C-terminal NDN11_17620 IPR000524 Transcription regulator HTH, GntR NDN11_17620 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_17620 IPR036390 Winged helix DNA-binding domain superfamily NDN11_17625 IPR003804 L-lactate permease NDN11_17630 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II NDN11_17630 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III NDN11_17630 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I NDN11_17630 IPR005841 Alpha-D-phosphohexomutase superfamily NDN11_17630 IPR016066 Alpha-D-phosphohexomutase, conserved site NDN11_17630 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily NDN11_17630 IPR005843 Alpha-D-phosphohexomutase, C-terminal NDN11_17630 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III NDN11_17635 IPR016040 NAD(P)-binding domain NDN11_17635 IPR036291 NAD(P)-binding domain superfamily NDN11_17635 IPR005886 UDP-glucose 4-epimerase NDN11_17640 IPR035476 Phosphoglucose isomerase, SIS domain 1 NDN11_17640 IPR035482 Phosphoglucose isomerase, SIS domain 2 NDN11_17640 IPR023096 Phosphoglucose isomerase, C-terminal NDN11_17640 IPR001672 Phosphoglucose isomerase (PGI) NDN11_17640 IPR018189 Phosphoglucose isomerase, conserved site NDN11_17645 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_17645 IPR036291 NAD(P)-binding domain superfamily NDN11_17645 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal NDN11_17645 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily NDN11_17645 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation NDN11_17645 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal NDN11_17645 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type NDN11_17645 IPR017476 UDP-glucose/GDP-mannose dehydrogenase NDN11_17650 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type NDN11_17650 IPR005835 Nucleotidyl transferase domain NDN11_17650 IPR029044 Nucleotide-diphospho-sugar transferases NDN11_17655 IPR036291 NAD(P)-binding domain superfamily NDN11_17655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_17655 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain NDN11_17660 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_17660 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_17660 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NDN11_17660 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_17665 IPR001451 Hexapeptide repeat NDN11_17665 IPR041561 PglD, N-terminal NDN11_17665 IPR020019 Sialic acid O-acyltransferase NeuD-like NDN11_17665 IPR011004 Trimeric LpxA-like superfamily NDN11_17670 IPR003362 Bacterial sugar transferase NDN11_17700 IPR001296 Glycosyl transferase, family 1 NDN11_17700 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain NDN11_17700 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA NDN11_17705 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NDN11_17705 IPR015424 Pyridoxal phosphate-dependent transferase NDN11_17705 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 NDN11_17705 IPR015421 Pyridoxal phosphate-dependent transferase, major domain NDN11_17710 IPR001451 Hexapeptide repeat NDN11_17710 IPR011004 Trimeric LpxA-like superfamily NDN11_17715 IPR004104 Oxidoreductase, C-terminal NDN11_17715 IPR036291 NAD(P)-binding domain superfamily NDN11_17715 IPR000683 Oxidoreductase, N-terminal NDN11_17720 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily NDN11_17720 IPR017476 UDP-glucose/GDP-mannose dehydrogenase NDN11_17720 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal NDN11_17720 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily NDN11_17720 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation NDN11_17720 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal NDN11_17720 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase NDN11_17720 IPR036291 NAD(P)-binding domain superfamily NDN11_17725 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB NDN11_17725 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like NDN11_17725 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain NDN11_17730 IPR003715 Polysaccharide export protein NDN11_17730 IPR019554 Soluble ligand binding domain NDN11_17730 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain NDN11_17735 IPR023485 Phosphotyrosine protein phosphatase I NDN11_17735 IPR036196 Phosphotyrosine protein phosphatase I superfamily NDN11_17735 IPR017867 Protein-tyrosine phosphatase, low molecular weight NDN11_17740 IPR025669 AAA domain NDN11_17740 IPR005702 Exopolysaccharide synthesis protein NDN11_17740 IPR032807 Tyrosine kinase, G-rich domain NDN11_17740 IPR003856 Polysaccharide chain length determinant N-terminal domain NDN11_17740 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_17745 IPR008104 Macrophage infectivity potentiator NDN11_17745 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain NDN11_17745 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily NDN11_17745 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal NDN11_17750 IPR008104 Macrophage infectivity potentiator NDN11_17750 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain NDN11_17750 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal NDN11_17750 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily NDN11_17755 IPR002656 Acyltransferase 3 NDN11_17755 IPR000821 Alanine racemase NDN11_17755 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal NDN11_17755 IPR011079 Alanine racemase, C-terminal NDN11_17755 IPR001608 Alanine racemase, N-terminal NDN11_17755 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site NDN11_17755 IPR029066 PLP-binding barrel NDN11_17755 IPR011248 Serine/alanine racemase NDN11_17760 IPR004268 Peptidoglycan biosynthesis protein MurJ NDN11_17765 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily NDN11_17765 IPR002502 N-acetylmuramoyl-L-alanine amidase domain NDN11_17770 IPR013785 Aldolase-type TIM barrel NDN11_17770 IPR004393 Nicotinate-nucleotide pyrophosphorylase NDN11_17770 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD NDN11_17770 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal NDN11_17770 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily NDN11_17770 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal NDN11_17770 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal NDN11_17785 IPR017767 Bacterial phospholipase C, phosphocholine-specific NDN11_17785 IPR007312 Phosphoesterase NDN11_17785 IPR017850 Alkaline-phosphatase-like, core domain superfamily NDN11_17785 IPR006311 Twin-arginine translocation pathway, signal sequence NDN11_17785 IPR008475 Bacterial phospholipase C, C-terminal domain NDN11_17790 IPR027408 PNPase/RNase PH domain superfamily NDN11_17790 IPR036345 Exoribonuclease, PH domain 2 superfamily NDN11_17790 IPR015847 Exoribonuclease, phosphorolytic domain 2 NDN11_17790 IPR001247 Exoribonuclease, phosphorolytic domain 1 NDN11_17790 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_17790 IPR002381 Ribonuclease PH, bacterial-type NDN11_17790 IPR018336 Ribonuclease PH, conserved site NDN11_17795 IPR005804 Fatty acid desaturase domain NDN11_17800 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain NDN11_17800 IPR001433 Oxidoreductase FAD/NAD(P)-binding NDN11_17800 IPR017938 Riboflavin synthase-like beta-barrel NDN11_17805 IPR023764 Transcriptional repressor HTH, FabR NDN11_17805 IPR009057 Homeobox-like domain superfamily NDN11_17805 IPR001647 DNA-binding HTH domain, TetR-type NDN11_17810 IPR013571 Transcription regulator QacR, C-terminal NDN11_17810 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NDN11_17810 IPR001647 DNA-binding HTH domain, TetR-type NDN11_17810 IPR009057 Homeobox-like domain superfamily NDN11_17810 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NDN11_17815 IPR001853 DSBA-like thioredoxin domain NDN11_17815 IPR013766 Thioredoxin domain NDN11_17815 IPR017937 Thioredoxin, conserved site NDN11_17815 IPR036249 Thioredoxin-like superfamily NDN11_17815 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL NDN11_17820 IPR010233 Ubiquinone biosynthesis O-methyltransferase NDN11_17820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NDN11_17825 IPR036412 HAD-like superfamily NDN11_17825 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic NDN11_17825 IPR023214 HAD superfamily NDN11_17825 IPR023198 Phosphoglycolate phosphatase-like, domain 2 NDN11_17825 IPR041492 Haloacid dehalogenase-like hydrolase NDN11_17825 IPR006439 HAD hydrolase, subfamily IA NDN11_17830 IPR036291 NAD(P)-binding domain superfamily NDN11_17830 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_17830 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_17840 IPR036393 Acetylglutamate kinase-like superfamily NDN11_17840 IPR016181 Acyl-CoA N-acyltransferase NDN11_17840 IPR001048 Aspartate/glutamate/uridylate kinase NDN11_17840 IPR033719 N-acetylglutamate synthase, kinase-like domain NDN11_17840 IPR010167 Amino-acid N-acetyltransferase NDN11_17840 IPR000182 GNAT domain NDN11_17845 IPR015168 SsuA/THI5-like NDN11_17845 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NDN11_17845 IPR010067 Aliphatic sulfonates-binding protein NDN11_17850 IPR010067 Aliphatic sulfonates-binding protein NDN11_17850 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NDN11_17850 IPR015168 SsuA/THI5-like NDN11_17855 IPR011251 Luciferase-like domain NDN11_17855 IPR036661 Luciferase-like domain superfamily NDN11_17855 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent NDN11_17860 IPR000515 ABC transporter type 1, transmembrane domain MetI-like NDN11_17860 IPR035906 MetI-like superfamily NDN11_17865 IPR003439 ABC transporter-like NDN11_17865 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_17865 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB NDN11_17865 IPR003593 AAA+ ATPase domain NDN11_17870 IPR009057 Homeobox-like domain superfamily NDN11_17870 IPR001647 DNA-binding HTH domain, TetR-type NDN11_17870 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily NDN11_17870 IPR041474 HTH-type transcriptional repressor NicS, C-terminal NDN11_17890 IPR005222 Competence protein ComF NDN11_17890 IPR000836 Phosphoribosyltransferase domain NDN11_17890 IPR029057 Phosphoribosyltransferase-like NDN11_17895 IPR035994 Nucleoside phosphorylase superfamily NDN11_17895 IPR000845 Nucleoside phosphorylase domain NDN11_17895 IPR010049 MTA/SAH nucleosidase NDN11_17905 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_17905 IPR023465 Riboflavin kinase domain superfamily NDN11_17905 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic NDN11_17905 IPR002606 Riboflavin kinase, bacterial NDN11_17905 IPR023468 Riboflavin kinase NDN11_17905 IPR015864 FAD synthetase NDN11_17910 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site NDN11_17910 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain NDN11_17910 IPR023585 Isoleucine-tRNA ligase, type 1 NDN11_17910 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding NDN11_17910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NDN11_17910 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding NDN11_17910 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain NDN11_17910 IPR010663 Zinc finger, FPG/IleRS-type NDN11_17910 IPR002300 Aminoacyl-tRNA synthetase, class Ia NDN11_17910 IPR002301 Isoleucine-tRNA ligase NDN11_17915 IPR001872 Peptidase A8, signal peptidase II NDN11_17920 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain NDN11_17930 IPR001238 DNA-binding, RecF NDN11_17930 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_17930 IPR003395 RecF/RecN/SMC, N-terminal NDN11_17930 IPR042174 DNA-binding RecF, domain 2 NDN11_17965 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain NDN11_17965 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site NDN11_17965 IPR029000 Cyclophilin-like domain superfamily NDN11_17970 IPR013094 Alpha/beta hydrolase fold-3 NDN11_17970 IPR029058 Alpha/Beta hydrolase fold NDN11_17985 IPR036390 Winged helix DNA-binding domain superfamily NDN11_17985 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_17985 IPR000847 Transcription regulator HTH, LysR NDN11_17985 IPR005119 LysR, substrate-binding NDN11_17990 IPR009012 GrpE nucleotide exchange factor, head NDN11_17990 IPR000740 GrpE nucleotide exchange factor NDN11_17990 IPR013805 GrpE nucleotide exchange factor, coiled-coil NDN11_17995 IPR013126 Heat shock protein 70 family NDN11_17995 IPR012725 Chaperone DnaK NDN11_17995 IPR018181 Heat shock protein 70, conserved site NDN11_17995 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily NDN11_17995 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily NDN11_18000 IPR001279 Metallo-beta-lactamase NDN11_18000 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like NDN11_18000 IPR022877 Protein of unknown funcion UPF0173 NDN11_18030 IPR023346 Lysozyme-like domain superfamily NDN11_18030 IPR011757 Lytic transglycosylase MltB NDN11_18030 IPR031304 Transglycosylase SLT domain 2 NDN11_18035 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit NDN11_18035 IPR016185 Pre-ATP-grasp domain superfamily NDN11_18035 IPR013815 ATP-grasp fold, subdomain 1 NDN11_18035 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type NDN11_18035 IPR011054 Rudiment single hybrid motif NDN11_18035 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain NDN11_18035 IPR011761 ATP-grasp fold NDN11_18040 IPR033747 Class I PurE NDN11_18040 IPR035893 PurE domain superfamily NDN11_18040 IPR000031 PurE domain NDN11_18040 IPR024694 PurE, prokaryotic type NDN11_18050 IPR005757 Murein peptide ligase NDN11_18050 IPR036565 Mur-like, catalytic domain superfamily NDN11_18050 IPR004101 Mur ligase, C-terminal NDN11_18050 IPR036615 Mur ligase, C-terminal domain superfamily NDN11_18050 IPR013221 Mur ligase, central NDN11_18050 IPR000713 Mur ligase, N-terminal catalytic domain NDN11_18055 IPR036291 NAD(P)-binding domain superfamily NDN11_18055 IPR020904 Short-chain dehydrogenase/reductase, conserved site NDN11_18055 IPR002347 Short-chain dehydrogenase/reductase SDR NDN11_18070 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily NDN11_18070 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily NDN11_18070 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal NDN11_18070 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal NDN11_18070 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal NDN11_18070 IPR006089 Acyl-CoA dehydrogenase, conserved site NDN11_18070 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain NDN11_18075 IPR036388 Winged helix-like DNA-binding domain superfamily NDN11_18075 IPR000847 Transcription regulator HTH, LysR NDN11_18075 IPR005119 LysR, substrate-binding NDN11_18075 IPR036390 Winged helix DNA-binding domain superfamily NDN11_18085 IPR005496 Integral membrane protein TerC NDN11_18085 IPR022369 Integral membrane protein TerC, riboswitch-linked NDN11_18100 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain NDN11_18100 IPR016185 Pre-ATP-grasp domain superfamily NDN11_18120 IPR032466 Metal-dependent hydrolase NDN11_18120 IPR006680 Amidohydrolase-related NDN11_18120 IPR014311 Guanine deaminase NDN11_18120 IPR011059 Metal-dependent hydrolase, composite domain superfamily NDN11_18125 IPR029057 Phosphoribosyltransferase-like NDN11_18125 IPR000836 Phosphoribosyltransferase domain NDN11_18125 IPR005904 Hypoxanthine phosphoribosyl transferase NDN11_18130 IPR007341 Transglycosylase-associated protein NDN11_18135 IPR017937 Thioredoxin, conserved site NDN11_18135 IPR036249 Thioredoxin-like superfamily NDN11_18135 IPR033954 Disulphide bond isomerase, DsbC/G NDN11_18135 IPR012336 Thioredoxin-like fold NDN11_18135 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal NDN11_18140 IPR006321 Pilus retraction protein PilT NDN11_18140 IPR001482 Type II/IV secretion system protein NDN11_18140 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_18150 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 NDN11_18150 IPR031168 TrmE-type guanine nucleotide-binding domain NDN11_18150 IPR018948 GTP-binding protein TrmE, N-terminal NDN11_18150 IPR006073 GTP binding domain NDN11_18150 IPR004520 tRNA modification GTPase MnmE NDN11_18150 IPR027368 tRNA modification GTPase MnmE domain 2 NDN11_18150 IPR025867 MnmE, helical domain NDN11_18150 IPR027417 P-loop containing nucleoside triphosphate hydrolase NDN11_18150 IPR005225 Small GTP-binding protein domain NDN11_18155 IPR038221 YidC, periplasmic domain superfamily NDN11_18155 IPR038210 Membrane insertase YidC, periplasmic domain NDN11_18155 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 NDN11_18155 IPR019998 Membrane insertase YidC NDN11_18155 IPR028055 Membrane insertase YidC/Oxa1, C-terminal NDN11_18155 IPR028053 Membrane insertase YidC, N-terminal NDN11_18160 IPR002696 Putative membrane protein insertion efficiency factor NDN11_18165 IPR000100 Ribonuclease P NDN11_18165 IPR020568 Ribosomal protein S5 domain 2-type fold NDN11_18165 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NDN11_18165 IPR020539 Ribonuclease P, conserved site NDN11_18170 IPR000271 Ribosomal protein L34 NDN11_18170 IPR020939 Ribosomal protein L34, conserved site