locus-tag	class	description
NDN13_00065	COG0006	proline dipeptidase activity
NDN13_00070	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NDN13_00075	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NDN13_00115	COG2272	Belongs to the type-B carboxylesterase lipase family
NDN13_00130	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NDN13_00135	COG0741	lytic transglycosylase activity
NDN13_00135	COG1388	LysM domain
NDN13_00145	COG4174	ABC transporter (Permease)
NDN13_00150	COG4239	(ABC) transporter, permease
NDN13_00155	COG4172	Belongs to the ABC transporter superfamily
NDN13_00170	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NDN13_00180	COG5001	Diguanylate cyclase
NDN13_00180	COG4251	negative regulation of phosphorylation
NDN13_00180	COG2203	Gaf domain
NDN13_00180	COG3706	GGDEF domain
NDN13_00195	COG3739	integral membrane protein
NDN13_00220	COG0302	gtp cyclohydrolase
NDN13_00255	COG1823	symporter activity
NDN13_00260	COG0512	Glutamine amidotransferase of anthranilate synthase
NDN13_00265	COG0174	glutamine synthetase
NDN13_00270	COG3161	chorismate lyase activity
NDN13_00275	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
NDN13_00325	COG0436	Aminotransferase
NDN13_00340	COG3706	GGDEF domain
NDN13_00345	COG0556	nucleotide-excision repair
NDN13_00390	COG1840	ABC-type Fe3 transport system, periplasmic component
NDN13_00395	COG3842	ATPase activity
NDN13_00415	COG0583	DNA-binding transcription factor activity
NDN13_00420	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NDN13_00425	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NDN13_00430	COG1773	rubredoxin
NDN13_00440	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
NDN13_00485	COG0222	ribosome binding
NDN13_00490	COG1253	flavin adenine dinucleotide binding
NDN13_00505	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NDN13_00510	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NDN13_00515	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NDN13_00520	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NDN13_00535	COG2223	nitrite transmembrane transporter activity
NDN13_00545	COG0024	Methionine aminopeptidase
NDN13_00550	COG0052	Belongs to the universal ribosomal protein uS2 family
NDN13_00560	COG3015	lipoprotein NlpE involved in copper resistance
NDN13_00565	COG0257	Belongs to the bacterial ribosomal protein bL36 family
NDN13_00580	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
NDN13_00585	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
NDN13_00585	COG0517	IMP dehydrogenase activity
NDN13_00590	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
NDN13_00600	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
NDN13_00605	COG1137	ATPase activity
NDN13_00610	COG1538	Outer membrane efflux protein
NDN13_00640	COG4122	O-methyltransferase activity
NDN13_00650	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
NDN13_00670	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
NDN13_00690	COG1253	flavin adenine dinucleotide binding
NDN13_00700	COG0583	DNA-binding transcription factor activity
NDN13_00705	COG1914	H( )-stimulated, divalent metal cation uptake system
NDN13_00725	COG4770	biotin carboxylase activity
NDN13_00735	COG1215	transferase activity, transferring glycosyl groups
NDN13_00755	COG1629	transport
NDN13_00770	COG0583	DNA-binding transcription factor activity
NDN13_00780	COG0583	DNA-binding transcription factor activity
NDN13_00805	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NDN13_00815	COG2207	Transcriptional regulator
NDN13_00820	COG1073	alpha beta
NDN13_00825	COG1902	pentaerythritol trinitrate reductase activity
NDN13_00830	COG2207	Transcriptional regulator
NDN13_00835	COG1073	alpha beta
NDN13_00840	COG1073	alpha beta
NDN13_00845	COG4221	oxidoreductase activity
NDN13_00850	COG4221	oxidoreductase activity
NDN13_00855	COG0583	DNA-binding transcription factor activity
NDN13_00865	COG0702	epimerase
NDN13_00890	COG4783	chaperone-mediated protein folding
NDN13_00905	COG1610	YqeY-like protein
NDN13_00975	COG0515	serine threonine protein kinase
NDN13_00975	COG2815	serine threonine protein kinase
NDN13_01010	COG0583	DNA-binding transcription factor activity
NDN13_01020	COG1113	amino acid transport
NDN13_01080	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
NDN13_01085	COG1686	Belongs to the peptidase S11 family
NDN13_01115	COG0583	DNA-binding transcription factor activity
NDN13_01120	COG1067	ATP-dependent peptidase activity
NDN13_01160	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NDN13_01165	COG1966	Carbon starvation protein
NDN13_01170	COG2879	small protein
NDN13_01175	COG0714	Associated with various cellular activities
NDN13_01255	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NDN13_01470	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NDN13_01500	COG1741	Belongs to the pirin family
NDN13_01510	COG0583	DNA-binding transcription factor activity
NDN13_01515	COG0697	spore germination
NDN13_01520	COG0446	pyridine nucleotide-disulphide oxidoreductase
NDN13_01520	COG1902	pentaerythritol trinitrate reductase activity
NDN13_01530	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NDN13_01550	COG2194	sulfuric ester hydrolase activity
NDN13_01565	COG1570	exodeoxyribonuclease VII activity
NDN13_01570	COG1113	amino acid transport
NDN13_01625	COG3209	COG3209 Rhs family protein
NDN13_01660	COG4964	Belongs to the GSP D family
NDN13_01720	COG0765	amino acid transport
NDN13_01725	COG0765	amino acid transport
NDN13_01735	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NDN13_01740	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NDN13_01760	COG2814	Major facilitator Superfamily
NDN13_01780	COG2223	nitrite transmembrane transporter activity
NDN13_01790	COG3214	Protein conserved in bacteria
NDN13_01795	COG1960	acyl-CoA dehydrogenase activity
NDN13_01805	COG0583	DNA-binding transcription factor activity
NDN13_01815	COG4770	biotin carboxylase activity
NDN13_01820	COG1024	Enoyl-CoA hydratase
NDN13_01825	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NDN13_01830	COG1960	acyl-CoA dehydrogenase activity
NDN13_01835	COG1309	transcriptional regulator
NDN13_01840	COG0318	PFAM AMP-dependent synthetase and ligase
NDN13_01860	COG2814	Major facilitator Superfamily
NDN13_01885	COG5006	permease, DMT superfamily
NDN13_01890	COG1522	sequence-specific DNA binding
NDN13_01900	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NDN13_01925	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NDN13_01930	COG1012	belongs to the aldehyde dehydrogenase family
NDN13_01935	COG0531	amino acid
NDN13_01940	COG2957	Belongs to the agmatine deiminase family
NDN13_01955	COG2076	Multidrug Resistance protein
NDN13_01975	COG4221	oxidoreductase activity
NDN13_01980	COG1414	Transcriptional regulator
NDN13_02000	COG1028	Short-chain dehydrogenase reductase Sdr
NDN13_02010	COG0446	pyridine nucleotide-disulphide oxidoreductase
NDN13_02015	COG2271	Major facilitator Superfamily
NDN13_02030	COG1028	Short-chain dehydrogenase reductase Sdr
NDN13_02045	COG0028	Belongs to the TPP enzyme family
NDN13_02060	COG2072	flavoprotein involved in K transport
NDN13_02085	COG0590	tRNA wobble adenosine to inosine editing
NDN13_02090	COG2807	transmembrane transport
NDN13_02130	COG0308	aminopeptidase N
NDN13_02140	COG1714	RDD family
NDN13_02155	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NDN13_02155	COG0475	glutathione-regulated potassium exporter activity
NDN13_02160	COG3135	benzoate transporter
NDN13_02170	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NDN13_02195	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NDN13_02210	COG1959	2 iron, 2 sulfur cluster binding
NDN13_02235	COG0316	Belongs to the HesB IscA family
NDN13_02240	COG0822	iron-sulfur transferase activity
NDN13_02265	COG0776	regulation of translation
NDN13_02270	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NDN13_02285	COG2137	regulation of response to DNA damage stimulus
NDN13_02295	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
NDN13_02300	COG1011	Hydrolase
NDN13_02330	COG0268	Binds directly to 16S ribosomal RNA
NDN13_02335	COG0702	epimerase
NDN13_02340	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NDN13_02365	COG1028	Short-chain dehydrogenase reductase Sdr
NDN13_02375	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
NDN13_02400	COG0424	maF-like protein
NDN13_02425	COG0778	Nitroreductase
NDN13_02510	COG3634	alkyl hydroperoxide reductase activity
NDN13_02525	COG1045	serine acetyltransferase
NDN13_02545	COG0436	Aminotransferase
NDN13_02555	COG0386	Belongs to the glutathione peroxidase family
NDN13_02565	COG1280	lysine exporter protein (LysE YggA)
NDN13_02610	COG1942	4-Oxalocrotonate Tautomerase
NDN13_02630	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NDN13_02660	COG0012	GTP binding
NDN13_02665	COG2011	ABC-type metal ion transport system permease component
NDN13_02670	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NDN13_02675	COG1464	Belongs to the NlpA lipoprotein family
NDN13_02715	COG0431	NADPH-dependent FMN reductase
NDN13_02810	COG3539	Fimbrial protein
NDN13_02835	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NDN13_02835	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
NDN13_02865	COG1278	Cold shock
NDN13_02870	COG1278	Cold shock
NDN13_02875	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NDN13_02890	COG3042	response to heat
NDN13_02910	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NDN13_02915	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
NDN13_02930	COG2353	YceI-like domain
NDN13_02935	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NDN13_02965	COG3153	acetyltransferase
NDN13_02990	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NDN13_02995	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NDN13_03000	COG0506	proline dehydrogenase activity
NDN13_03000	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
NDN13_03000	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
NDN13_03010	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NDN13_03015	COG1027	Aspartate ammonia-lyase
NDN13_03020	COG3397	chitin binding
NDN13_03040	COG1132	(ABC) transporter
NDN13_03060	COG0786	glutamate:sodium symporter activity
NDN13_03110	COG0668	transmembrane transport
NDN13_03115	COG3122	Protein conserved in bacteria
NDN13_03155	COG2850	peptidyl-arginine hydroxylation
NDN13_03165	COG4245	von Willebrand factor, type A
NDN13_03210	COG1358	cellular component organization or biogenesis
NDN13_03255	COG0824	Thioesterase
NDN13_03260	COG1454	alcohol dehydrogenase
NDN13_03290	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NDN13_03310	COG0069	glutamate synthase activity
NDN13_03325	COG1454	alcohol dehydrogenase
NDN13_03330	COG2610	gluconate transmembrane transporter activity
NDN13_03335	COG2831	hemolysin activation secretion protein
NDN13_03350	COG3210	domain, Protein
NDN13_03395	COG0625	glutathione transferase activity
NDN13_03405	COG1113	amino acid transport
NDN13_03410	COG0583	DNA-binding transcription factor activity
NDN13_03425	COG1012	belongs to the aldehyde dehydrogenase family
NDN13_03435	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NDN13_03440	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NDN13_03440	COG0723	plastoquinol--plastocyanin reductase activity
NDN13_03465	COG2814	Major facilitator Superfamily
NDN13_03480	COG0439	Biotin carboxylase
NDN13_03495	COG1116	anion transmembrane transporter activity
NDN13_03495	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NDN13_03505	COG2223	nitrite transmembrane transporter activity
NDN13_03510	COG2146	nitrite reductase [NAD(P)H] activity
NDN13_03510	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NDN13_03515	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NDN13_03520	COG0243	molybdopterin cofactor binding
NDN13_03530	COG0477	Major facilitator Superfamily
NDN13_03535	COG0583	DNA-binding transcription factor activity
NDN13_03545	COG2175	clavaminate synthase activity
NDN13_03550	COG3246	L-lysine catabolic process to acetate
NDN13_03555	COG2814	Major facilitator Superfamily
NDN13_03570	COG2855	membrane
NDN13_03600	COG0243	molybdopterin cofactor binding
NDN13_03620	COG0521	Mo-molybdopterin cofactor biosynthetic process
NDN13_03620	COG0315	cyclic pyranopterin monophosphate synthase activity
NDN13_03625	COG0303	'Molybdopterin
NDN13_03635	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NDN13_03640	COG0697	spore germination
NDN13_03645	COG2920	part of a sulfur-relay system
NDN13_03660	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
NDN13_03690	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
NDN13_03710	COG2204	response regulator
NDN13_03715	COG3852	Histidine kinase
NDN13_03725	COG0528	UMP kinase activity
NDN13_03730	COG0233	cytoplasmic translational termination
NDN13_03735	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NDN13_03740	COG0575	Belongs to the CDS family
NDN13_03755	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NDN13_03765	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NDN13_03775	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NDN13_03780	COG2207	Transcriptional regulator
NDN13_03785	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NDN13_03790	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NDN13_03795	COG0642	Histidine kinase
NDN13_03800	COG0745	RESPONSE REGULATOR receiver
NDN13_03805	COG4232	protein-disulfide reductase activity
NDN13_03810	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NDN13_03820	COG1960	acyl-CoA dehydrogenase activity
NDN13_03825	COG1960	acyl-CoA dehydrogenase activity
NDN13_03835	COG1012	belongs to the aldehyde dehydrogenase family
NDN13_03835	COG2030	dehydratase
NDN13_03840	COG3396	Phenylacetate-CoA oxygenase
NDN13_03845	COG3460	Phenylacetate-CoA oxygenase
NDN13_03850	COG3396	Phenylacetate-CoA oxygenase
NDN13_03855	COG2151	metal-sulfur cluster biosynthetic enzyme
NDN13_03860	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NDN13_03865	COG1024	Enoyl-CoA hydratase
NDN13_03870	COG1024	Enoyl-CoA hydratase
NDN13_03875	COG1250	3-hydroxyacyl-CoA dehydrogenase
NDN13_03880	COG0183	Belongs to the thiolase family
NDN13_03885	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
NDN13_03890	COG3327	negative regulation of DNA-templated transcription, initiation
NDN13_03905	COG1414	Transcriptional regulator
NDN13_03910	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NDN13_03930	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NDN13_03960	COG2223	nitrite transmembrane transporter activity
NDN13_03975	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NDN13_03990	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
NDN13_04015	COG4771	TonB-dependent receptor
NDN13_04040	COG0730	response to heat
NDN13_04080	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NDN13_04105	COG0477	Major facilitator Superfamily
NDN13_04150	COG2076	Multidrug Resistance protein
NDN13_04210	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NDN13_04230	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NDN13_04240	COG0133	tryptophan synthase activity
NDN13_04255	COG3706	GGDEF domain
NDN13_04275	COG2249	NAD(P)H dehydrogenase (quinone) activity
NDN13_04280	COG2207	Transcriptional regulator
NDN13_04285	COG4589	Belongs to the CDS family
NDN13_04300	COG0671	phosphoesterase, PA-phosphatase related
NDN13_04300	COG2453	phosphatase
NDN13_04305	COG2267	carboxylic ester hydrolase activity
NDN13_04310	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NDN13_04315	COG4628	conserved protein (DUF2132)
NDN13_04325	COG1028	Short-chain dehydrogenase reductase Sdr
NDN13_04400	COG3052	prosthetic group binding
NDN13_04405	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
NDN13_04415	COG1309	transcriptional regulator
NDN13_04430	COG0657	acetylesterase activity
NDN13_04440	COG1231	oxidoreductase activity
NDN13_04450	COG4774	siderophore transport
NDN13_04455	COG0523	cobalamin synthesis protein
NDN13_04470	COG1469	GTP cyclohydrolase I activity
NDN13_04475	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NDN13_04480	COG4451	ribulose bisphosphate carboxylase, small
NDN13_04480	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
NDN13_04485	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
NDN13_04510	COG1595	DNA-templated transcription, initiation
NDN13_04515	COG1346	cytolysis
NDN13_04525	COG0583	DNA-binding transcription factor activity
NDN13_04530	COG0625	glutathione transferase activity
NDN13_04535	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NDN13_04540	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NDN13_04585	COG1271	oxidase subunit
NDN13_04590	COG1294	oxidase, subunit
NDN13_04610	COG2814	Major facilitator Superfamily
NDN13_04640	COG4783	chaperone-mediated protein folding
NDN13_04660	COG1595	DNA-templated transcription, initiation
NDN13_04665	COG0583	DNA-binding transcription factor activity
NDN13_04670	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
NDN13_04680	COG0789	Transcriptional regulator
NDN13_04690	COG0446	pyridine nucleotide-disulphide oxidoreductase
NDN13_04690	COG1902	pentaerythritol trinitrate reductase activity
NDN13_04705	COG3268	Saccharopine dehydrogenase
NDN13_04735	COG0745	RESPONSE REGULATOR receiver
NDN13_04740	COG0642	Histidine kinase
NDN13_04745	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
NDN13_04755	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
NDN13_04780	COG1595	DNA-templated transcription, initiation
NDN13_04790	COG3220	belongs to the UPF0276 family
NDN13_04805	COG0745	RESPONSE REGULATOR receiver
NDN13_04810	COG2205	protein histidine kinase activity
NDN13_04860	COG0633	Ferredoxin
NDN13_04870	COG1944	ATP diphosphatase activity
NDN13_04880	COG0697	spore germination
NDN13_04930	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NDN13_04950	COG2207	Transcriptional regulator
NDN13_04960	COG1802	Transcriptional regulator
NDN13_04980	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
NDN13_04990	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NDN13_05100	COG0739	heme binding
NDN13_05125	COG3561	AntA/AntB antirepressor
NDN13_05335	COG3956	TIGRFAM MazG family protein
NDN13_05475	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
NDN13_05480	COG0148	phosphopyruvate hydratase activity
NDN13_05515	COG0446	pyridine nucleotide-disulphide oxidoreductase
NDN13_05515	COG1902	pentaerythritol trinitrate reductase activity
NDN13_05525	COG2267	carboxylic ester hydrolase activity
NDN13_05530	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NDN13_05535	COG0488	(ABC) transporter
NDN13_05555	COG0542	response to heat
NDN13_05560	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
NDN13_05595	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NDN13_05600	COG0569	domain protein
NDN13_05605	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
NDN13_05630	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NDN13_05655	COG1294	oxidase, subunit
NDN13_05660	COG4890	Cyd operon protein YbgT
NDN13_05705	COG0625	glutathione transferase activity
NDN13_05715	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
NDN13_05720	COG0583	DNA-binding transcription factor activity
NDN13_05775	COG0552	protein localization to endoplasmic reticulum
NDN13_05800	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
NDN13_05800	COG0517	IMP dehydrogenase activity
NDN13_05805	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NDN13_05810	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
NDN13_05825	COG0583	DNA-binding transcription factor activity
NDN13_05830	COG0024	Methionine aminopeptidase
NDN13_05855	COG1846	Transcriptional regulator
NDN13_05870	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
NDN13_05875	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
NDN13_05890	COG2814	Major facilitator Superfamily
NDN13_05895	COG1309	transcriptional regulator
NDN13_05900	COG2431	L-lysine efflux transmembrane transporter activity
NDN13_05930	COG0776	regulation of translation
NDN13_05950	COG0590	tRNA wobble adenosine to inosine editing
NDN13_05995	COG0084	hydrolase, TatD family'
NDN13_06030	COG1663	tetraacyldisaccharide 4'-kinase activity
NDN13_06035	COG1132	(ABC) transporter
NDN13_06045	COG0811	peptide transport
NDN13_06050	COG1475	DNA binding
NDN13_06055	COG1192	Involved in chromosome partitioning
NDN13_06065	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NDN13_06070	COG3178	'Phosphotransferase
NDN13_06080	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NDN13_06090	COG0513	Belongs to the DEAD box helicase family
NDN13_06110	COG2363	Small membrane protein
NDN13_06155	COG4650	regulator
NDN13_06165	COG1234	tRNA 3'-trailer cleavage
NDN13_06170	COG1690	Belongs to the RtcB family
NDN13_06185	COG0430	RNA-3'-phosphate cyclase activity
NDN13_06190	COG2195	Cleaves the N-terminal amino acid of tripeptides
NDN13_06200	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NDN13_06220	COG1960	acyl-CoA dehydrogenase activity
NDN13_06225	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NDN13_06240	COG3139	Protein of unknown function (DUF1315)
NDN13_06245	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NDN13_06250	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NDN13_06260	COG0494	nUDIX hydrolase
NDN13_06270	COG0642	Histidine kinase
NDN13_06285	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NDN13_06290	COG1720	tRNA m6t6A37 methyltransferase activity
NDN13_06300	COG1309	transcriptional regulator
NDN13_06315	COG0583	DNA-binding transcription factor activity
NDN13_06320	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
NDN13_06330	COG2814	Major facilitator Superfamily
NDN13_06335	COG3647	Membrane
NDN13_06340	COG4607	ABC-type enterochelin transport system periplasmic component
NDN13_06345	COG4604	ABC transporter, ATP-binding protein
NDN13_06350	COG4605	iron ion homeostasis
NDN13_06355	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NDN13_06360	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NDN13_06365	COG0471	metal ion transport
NDN13_06375	COG1262	PFAM Formylglycine-generating sulfatase enzyme
NDN13_06410	COG0729	surface antigen
NDN13_06440	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NDN13_06460	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
NDN13_06470	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NDN13_06500	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NDN13_06515	COG4682	membrane
NDN13_06525	COG0826	peptidase U32
NDN13_06530	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NDN13_06540	COG1116	anion transmembrane transporter activity
NDN13_06555	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NDN13_06560	COG0864	Transcriptional regulator
NDN13_06565	COG0439	Biotin carboxylase
NDN13_06610	COG1131	(ABC) transporter
NDN13_06615	COG0842	Transport permease protein
NDN13_06630	COG0772	Belongs to the SEDS family
NDN13_06635	COG2951	lytic endotransglycosylase activity
NDN13_06655	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NDN13_06660	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
NDN13_06675	COG1643	Atp-dependent helicase
NDN13_06695	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NDN13_06715	COG3634	alkyl hydroperoxide reductase activity
NDN13_06735	COG0220	tRNA (guanine-N7-)-methyltransferase activity
NDN13_06785	COG2885	chlorophyll binding
NDN13_06830	COG1765	OsmC-like protein
NDN13_06840	COG0501	Belongs to the peptidase M48B family
NDN13_06845	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
NDN13_06850	COG2072	flavoprotein involved in K transport
NDN13_06870	COG1309	transcriptional regulator
NDN13_06885	COG3585	molybdate ion transport
NDN13_06890	COG3829	transcription factor binding
NDN13_06900	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NDN13_06905	COG1116	anion transmembrane transporter activity
NDN13_06920	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NDN13_06930	COG2358	TRAP transporter, solute receptor (TAXI family
NDN13_06940	COG0667	Aldo Keto reductase
NDN13_06945	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NDN13_06950	COG5002	protein histidine kinase activity
NDN13_06960	COG0745	RESPONSE REGULATOR receiver
NDN13_06965	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NDN13_06970	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NDN13_06975	COG1538	Outer membrane efflux protein
NDN13_06985	COG2837	iron assimilation
NDN13_06990	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NDN13_06995	COG0243	molybdopterin cofactor binding
NDN13_07030	COG1271	oxidase subunit
NDN13_07035	COG1294	oxidase, subunit
NDN13_07040	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NDN13_07060	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NDN13_07065	COG0010	Belongs to the arginase family
NDN13_07095	COG2188	Transcriptional regulator
NDN13_07105	COG0583	DNA-binding transcription factor activity
NDN13_07120	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NDN13_07130	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NDN13_07185	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
NDN13_07190	COG4266	Belongs to the allantoicase family
NDN13_07195	COG2186	Transcriptional regulator
NDN13_07200	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NDN13_07225	COG2233	PERMEase
NDN13_07230	COG2351	hydroxyisourate hydrolase activity
NDN13_07245	COG4993	Dehydrogenase
NDN13_07250	COG3659	wide pore channel activity
NDN13_07255	COG3420	alginic acid biosynthetic process
NDN13_07260	COG0710	3-dehydroquinate dehydratase activity
NDN13_07265	COG3485	protocatechuate 3,4-dioxygenase
NDN13_07270	COG3485	protocatechuate 3,4-dioxygenase
NDN13_07275	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NDN13_07280	COG2271	Major facilitator Superfamily
NDN13_07285	COG0596	Alpha beta hydrolase
NDN13_07290	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NDN13_07295	COG0183	Belongs to the thiolase family
NDN13_07300	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NDN13_07305	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
NDN13_07310	COG1414	Transcriptional regulator
NDN13_07315	COG2985	domain, Protein
NDN13_07330	COG1012	belongs to the aldehyde dehydrogenase family
NDN13_07335	COG4638	Rieske (2fe-2S)
NDN13_07340	COG0657	acetylesterase activity
NDN13_07350	COG0473	3-isopropylmalate dehydrogenase activity
NDN13_07355	COG0583	DNA-binding transcription factor activity
NDN13_07420	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NDN13_07440	COG0531	amino acid
NDN13_07445	COG4303	Ethanolamine ammonia lyase large subunit
NDN13_07450	COG4302	ethanolamine ammonia-lyase activity
NDN13_07455	COG0519	Catalyzes the synthesis of GMP from XMP
NDN13_07455	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NDN13_07470	COG1073	alpha beta
NDN13_07475	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NDN13_07485	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NDN13_07500	COG0778	Nitroreductase
NDN13_07505	COG0697	spore germination
NDN13_07510	COG1923	regulation of RNA biosynthetic process
NDN13_07520	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NDN13_07525	COG0802	atpase or kinase
NDN13_07560	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NDN13_07565	COG5001	Diguanylate cyclase
NDN13_07565	COG3300	MHYT domain
NDN13_07585	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
NDN13_07590	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
NDN13_07595	COG1845	cytochrome c oxidase, subunit III
NDN13_07600	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
NDN13_07630	COG2249	NAD(P)H dehydrogenase (quinone) activity
NDN13_07635	COG1733	regulation of RNA biosynthetic process
NDN13_07640	COG0305	Participates in initiation and elongation during chromosome replication
NDN13_07645	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NDN13_07660	COG1305	Transglutaminase-like
NDN13_07670	COG2308	Evidence 4 Homologs of previously reported genes of
NDN13_07685	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NDN13_07705	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NDN13_07725	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NDN13_07735	COG3038	cytochrome b561
NDN13_07740	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
NDN13_07745	COG2252	PERMEase
NDN13_07770	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
NDN13_07780	COG1477	protein flavinylation
NDN13_07825	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
NDN13_07830	COG0138	bifunctional purine biosynthesis protein purh
NDN13_07840	COG1464	Belongs to the NlpA lipoprotein family
NDN13_07845	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NDN13_07850	COG2011	ABC-type metal ion transport system permease component
NDN13_07870	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NDN13_07880	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
NDN13_07885	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
NDN13_07890	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NDN13_07925	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
NDN13_07940	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NDN13_07945	COG0571	ribonuclease III activity
NDN13_07960	COG0481	GTPase activity
NDN13_07975	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NDN13_08005	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NDN13_08010	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NDN13_08015	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
NDN13_08025	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
NDN13_08030	COG4208	sulfate ABC transporter
NDN13_08035	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
NDN13_08040	COG0583	DNA-binding transcription factor activity
NDN13_08055	COG0602	queuosine metabolic process
NDN13_08060	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
NDN13_08075	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
NDN13_08095	COG1942	4-Oxalocrotonate Tautomerase
NDN13_08100	COG0625	glutathione transferase activity
NDN13_08105	COG0583	DNA-binding transcription factor activity
NDN13_08110	COG1051	belongs to the nudix hydrolase family
NDN13_08110	COG1056	cytidyltransferase-related domain
NDN13_08115	COG1024	Enoyl-CoA hydratase
NDN13_08120	COG1929	Belongs to the glycerate kinase type-1 family
NDN13_08125	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NDN13_08160	COG2814	Major facilitator Superfamily
NDN13_08165	COG0047	phosphoribosylformylglycinamidine synthase activity
NDN13_08165	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NDN13_08200	COG0824	Thioesterase
NDN13_08220	COG0823	Involved in the tonB-independent uptake of proteins
NDN13_08225	COG2885	chlorophyll binding
NDN13_08240	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NDN13_08270	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NDN13_08275	COG0628	permease
NDN13_08285	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NDN13_08295	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NDN13_08295	COG0616	signal peptide processing
NDN13_08305	COG0658	competence protein
NDN13_08305	COG2333	competence protein COMEC
NDN13_08310	COG4591	ABC-type transport system involved in lipoprotein release permease component
NDN13_08315	COG1136	(ABC) transporter
NDN13_08395	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
NDN13_08400	COG1280	lysine exporter protein (LysE YggA)
NDN13_08405	COG0596	Alpha beta hydrolase
NDN13_08415	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
NDN13_08420	COG0019	diaminopimelate decarboxylase activity
NDN13_08430	COG1113	amino acid transport
NDN13_08435	COG1115	amino acid carrier protein
NDN13_08455	COG0306	phosphate transporter
NDN13_08475	COG2066	Belongs to the glutaminase family
NDN13_08480	COG0242	peptide deformylase activity
NDN13_08500	COG0589	response to stress
NDN13_08535	COG2175	clavaminate synthase activity
NDN13_08540	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NDN13_08545	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
NDN13_08550	COG4521	taurine ABC transporter
NDN13_08560	COG1045	serine acetyltransferase
NDN13_08565	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NDN13_08570	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NDN13_08575	COG1280	lysine exporter protein (LysE YggA)
NDN13_08585	COG2188	Transcriptional regulator
NDN13_08590	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
NDN13_08605	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NDN13_08635	COG1230	cation diffusion facilitator family transporter
NDN13_08650	COG4149	molybdate abc transporter
NDN13_08655	COG0725	ABC transporter, periplasmic molybdate-binding protein
NDN13_08770	COG0671	phosphoesterase, PA-phosphatase related
NDN13_08775	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NDN13_08785	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NDN13_08785	COG3008	intermembrane lipid transfer
NDN13_08790	COG2995	paraquat-inducible protein a
NDN13_08800	COG0833	amino acid
NDN13_08810	COG3724	N-succinylarginine dihydrolase activity
NDN13_08815	COG1012	belongs to the aldehyde dehydrogenase family
NDN13_08820	COG3138	arginine N-succinyltransferase
NDN13_08825	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NDN13_08830	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NDN13_08840	COG0281	malic enzyme
NDN13_08860	COG4774	siderophore transport
NDN13_08885	COG1960	acyl-CoA dehydrogenase activity
NDN13_08890	COG1538	Outer membrane efflux protein
NDN13_08910	COG1595	DNA-templated transcription, initiation
NDN13_08940	COG4771	TonB-dependent receptor
NDN13_08950	COG0583	DNA-binding transcription factor activity
NDN13_08955	COG4948	Mandelate Racemase Muconate Lactonizing
NDN13_08960	COG4829	muconolactone delta-isomerase
NDN13_08970	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
NDN13_08975	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NDN13_08980	COG0183	Belongs to the thiolase family
NDN13_08985	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NDN13_08995	COG1012	belongs to the aldehyde dehydrogenase family
NDN13_09005	COG3733	amine oxidase
NDN13_09015	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NDN13_09025	COG1028	Short-chain dehydrogenase reductase Sdr
NDN13_09035	COG4638	Rieske (2fe-2S)
NDN13_09050	COG0154	amidase activity
NDN13_09060	COG1250	3-hydroxyacyl-CoA dehydrogenase
NDN13_09075	COG2814	Major facilitator Superfamily
NDN13_09190	COG0789	Transcriptional regulator
NDN13_09200	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NDN13_09205	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NDN13_09220	COG2072	flavoprotein involved in K transport
NDN13_09225	COG0300	oxidoreductase activity
NDN13_09240	COG0446	pyridine nucleotide-disulphide oxidoreductase
NDN13_09240	COG1902	pentaerythritol trinitrate reductase activity
NDN13_09245	COG4689	acetoacetate decarboxylase
NDN13_09250	COG0300	oxidoreductase activity
NDN13_09260	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NDN13_09265	COG0235	Class ii aldolase
NDN13_09270	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NDN13_09300	COG2986	histidine ammonia-lyase
NDN13_09305	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NDN13_09325	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NDN13_09330	COG0805	protein transport
NDN13_09350	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NDN13_09355	COG4569	acetaldehyde dehydrogenase (acetylating) activity
NDN13_09360	COG3971	2-oxopent-4-enoate hydratase activity
NDN13_09380	COG2067	long-chain fatty acid transport protein
NDN13_09415	COG0473	3-isopropylmalate dehydrogenase activity
NDN13_09415	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NDN13_09420	COG0473	3-isopropylmalate dehydrogenase activity
NDN13_09420	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NDN13_09435	COG2814	Major facilitator Superfamily
NDN13_09455	COG0582	viral genome integration into host DNA
NDN13_09465	COG2814	Major facilitator Superfamily
NDN13_09470	COG1566	PFAM secretion protein HlyD family protein
NDN13_09485	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NDN13_09485	COG0543	2 iron, 2 sulfur cluster binding
NDN13_09490	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
NDN13_09495	COG4638	Rieske (2fe-2S)
NDN13_09500	COG2226	methyltransferase
NDN13_09505	COG2050	protein possibly involved in aromatic compounds catabolism
NDN13_09520	COG1090	epimerase
NDN13_09540	COG1024	Enoyl-CoA hydratase
NDN13_09545	COG0420	3'-5' exonuclease activity
NDN13_09555	COG1011	Hydrolase
NDN13_09590	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NDN13_09615	COG0121	glutamine amidotransferase
NDN13_09630	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NDN13_09635	COG0756	dUTP diphosphatase activity
NDN13_09640	COG0210	DNA helicase
NDN13_09645	COG2885	chlorophyll binding
NDN13_09650	COG0204	Acyl-transferase
NDN13_09660	COG0850	regulation of cytokinetic process
NDN13_09665	COG2894	cell division
NDN13_09670	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
NDN13_09680	COG1674	ftsk spoiiie
NDN13_09685	COG0492	ferredoxin-NADP+ reductase activity
NDN13_09690	COG0500	methyltransferase
NDN13_09695	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
NDN13_09705	COG0456	acetyltransferase
NDN13_09725	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NDN13_09750	COG1981	membrane
NDN13_09775	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
NDN13_09775	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NDN13_09800	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NDN13_09825	COG1496	oxidoreductase activity
NDN13_09830	COG0564	pseudouridine synthase activity
NDN13_09840	COG0358	DNA primase activity
NDN13_09855	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
NDN13_09885	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NDN13_09920	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NDN13_09930	COG0351	phosphomethylpyrimidine kinase
NDN13_09930	COG0352	thiamine-phosphate diphosphorylase activity
NDN13_09930	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
NDN13_09935	COG1652	LysM domain
NDN13_09945	COG1028	Short-chain dehydrogenase reductase Sdr
NDN13_09955	COG0333	Belongs to the bacterial ribosomal protein bL32 family
NDN13_09960	COG1399	metal-binding, possibly nucleic acid-binding protein
NDN13_09965	COG3101	peptidyl-lysine hydroxylation
NDN13_09970	COG0009	L-threonylcarbamoyladenylate synthase
NDN13_09985	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NDN13_09990	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NDN13_10015	COG0339	signal peptide processing
NDN13_10025	COG4166	transmembrane transport
NDN13_10070	COG4106	trans-aconitate 2-methyltransferase activity
NDN13_10085	COG0596	Alpha beta hydrolase
NDN13_10085	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NDN13_10085	COG2226	methyltransferase
NDN13_10095	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
NDN13_10100	COG0583	DNA-binding transcription factor activity
NDN13_10105	COG4638	Rieske (2fe-2S)
NDN13_10110	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
NDN13_10115	COG0543	2 iron, 2 sulfur cluster binding
NDN13_10115	COG0633	Ferredoxin
NDN13_10120	COG1028	Short-chain dehydrogenase reductase Sdr
NDN13_10125	COG3135	benzoate transporter
NDN13_10130	COG2814	Major facilitator Superfamily
NDN13_10150	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NDN13_10160	COG1196	nuclear chromosome segregation
NDN13_10180	COG0730	response to heat
NDN13_10200	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NDN13_10210	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NDN13_10235	COG0644	oxidoreductase
NDN13_10285	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NDN13_10290	COG0489	protein tyrosine kinase activity
NDN13_10325	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NDN13_10325	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NDN13_10335	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NDN13_10345	COG4716	Myosin-crossreactive antigen
NDN13_10360	COG2226	methyltransferase
NDN13_10385	COG2515	1-aminocyclopropane-1-carboxylate deaminase
NDN13_10395	COG2081	HI0933 family
NDN13_10405	COG0668	transmembrane transport
NDN13_10430	COG0583	DNA-binding transcription factor activity
NDN13_10435	COG4774	siderophore transport
NDN13_10440	COG1278	Cold shock
NDN13_10460	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NDN13_10465	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
NDN13_10470	COG0713	ATP synthesis coupled electron transport
NDN13_10480	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NDN13_10495	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
NDN13_10505	COG0649	NAD binding
NDN13_10505	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NDN13_10515	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
NDN13_10520	COG3706	GGDEF domain
NDN13_10530	COG2205	protein histidine kinase activity
NDN13_10535	COG0745	RESPONSE REGULATOR receiver
NDN13_10555	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NDN13_10570	COG1309	transcriptional regulator
NDN13_10575	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NDN13_10605	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NDN13_10610	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NDN13_10615	COG1309	transcriptional regulator
NDN13_10635	COG1063	alcohol dehydrogenase
NDN13_10640	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NDN13_10705	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
NDN13_10710	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
NDN13_10715	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NDN13_10740	COG2132	Multicopper oxidase
NDN13_10750	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
NDN13_10760	COG2885	chlorophyll binding
NDN13_10760	COG3047	cAMP biosynthetic process
NDN13_10780	COG1968	undecaprenyl-diphosphatase activity
NDN13_10785	COG1214	PFAM Peptidase M22, glycoprotease
NDN13_10795	COG0494	nUDIX hydrolase
NDN13_10845	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NDN13_10855	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
NDN13_10860	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NDN13_10925	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NDN13_10935	COG1846	Transcriptional regulator
NDN13_10940	COG1764	response to oxidative stress
NDN13_10965	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NDN13_10965	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NDN13_10970	COG2755	lipolytic protein G-D-S-L family
NDN13_10970	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
NDN13_10985	COG0037	tRNA processing
NDN13_10995	COG0248	Ppx GppA phosphatase
NDN13_11020	COG0072	phenylalanine-tRNA ligase activity
NDN13_11070	COG1238	metal cluster binding
NDN13_11085	COG0625	glutathione transferase activity
NDN13_11105	COG0318	PFAM AMP-dependent synthetase and ligase
NDN13_11110	COG3028	Belongs to the UPF0307 family
NDN13_11135	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NDN13_11140	COG0617	tRNA 3'-terminal CCA addition
NDN13_11145	COG1555	photosystem II stabilization
NDN13_11150	COG3956	TIGRFAM MazG family protein
NDN13_11165	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NDN13_11185	COG5002	protein histidine kinase activity
NDN13_11185	COG0784	Response regulator, receiver
NDN13_11185	COG2205	protein histidine kinase activity
NDN13_11200	COG2084	Dehydrogenase
NDN13_11205	COG3622	Belongs to the hyi family
NDN13_11215	COG1051	belongs to the nudix hydrolase family
NDN13_11245	COG2814	Major facilitator Superfamily
NDN13_11250	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NDN13_11265	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
NDN13_11280	COG0084	hydrolase, TatD family'
NDN13_11285	COG0726	polysaccharide deacetylase
NDN13_11295	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
NDN13_11310	COG0110	maltose O-acetyltransferase activity
NDN13_11315	COG0438	transferase activity, transferring glycosyl groups
NDN13_11380	COG0583	DNA-binding transcription factor activity
NDN13_11415	COG0798	PFAM Bile acid sodium symporter
NDN13_11420	COG0640	Transcriptional regulator
NDN13_11445	COG1476	TRANSCRIPTIONal
NDN13_11470	COG0440	acetolactate synthase activity
NDN13_11475	COG0028	Belongs to the TPP enzyme family
NDN13_11500	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NDN13_11505	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NDN13_11510	COG0577	efflux transmembrane transporter activity
NDN13_11510	COG1136	(ABC) transporter
NDN13_11515	COG1538	Outer membrane efflux protein
NDN13_11535	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
NDN13_11540	COG1162	GTPase activity
NDN13_11550	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
NDN13_11590	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NDN13_11600	COG3781	membrane
NDN13_11605	COG0667	Aldo Keto reductase
NDN13_11610	COG0583	DNA-binding transcription factor activity
NDN13_11615	COG0613	PHP domain protein
NDN13_11645	COG1666	GTP binding
NDN13_11660	COG1956	GAF domain-containing protein
NDN13_11665	COG1607	acyl-coa hydrolase
NDN13_11720	COG2199	diguanylate cyclase activity
NDN13_11730	COG1408	metallophosphoesterase
NDN13_11735	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NDN13_11750	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NDN13_11775	COG0793	Belongs to the peptidase S41A family
NDN13_11790	COG0596	Alpha beta hydrolase
NDN13_11790	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NDN13_11790	COG2226	methyltransferase
NDN13_11800	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NDN13_11805	COG0280	phosphate acetyltransferase
NDN13_11805	COG0857	belongs to the CobB CobQ family
NDN13_11815	COG0697	spore germination
NDN13_11825	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
NDN13_11825	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
NDN13_11850	COG0740	serine-type endopeptidase activity
NDN13_11860	COG4771	TonB-dependent receptor
NDN13_11870	COG3128	pkhd-type hydroxylase
NDN13_11880	COG4774	siderophore transport
NDN13_11890	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NDN13_11900	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NDN13_11900	COG2813	Specifically methylates the guanine in position
NDN13_11955	COG1785	Belongs to the alkaline phosphatase family
NDN13_11980	COG1295	ribonuclease BN
NDN13_11990	COG2207	Transcriptional regulator
NDN13_11995	COG0179	Fumarylacetoacetate (FAA) hydrolase
NDN13_12050	COG3180	Ammonia monooxygenase
NDN13_12075	COG0557	exoribonuclease II activity
NDN13_12085	COG0339	signal peptide processing
NDN13_12110	COG0697	spore germination
NDN13_12150	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
NDN13_12155	COG1960	acyl-CoA dehydrogenase activity
NDN13_12185	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NDN13_12220	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NDN13_12235	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NDN13_12260	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NDN13_12285	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NDN13_12305	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NDN13_12325	COG0433	COG0433 Predicted ATPase
NDN13_12335	COG1959	2 iron, 2 sulfur cluster binding
NDN13_12350	COG1301	dicarboxylic acid transport
NDN13_12355	COG1946	Acyl-CoA thioesterase
NDN13_12360	COG2937	Belongs to the GPAT DAPAT family
NDN13_12365	COG0657	acetylesterase activity
NDN13_12375	COG2072	flavoprotein involved in K transport
NDN13_12395	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NDN13_12400	COG1040	competence protein
NDN13_12405	COG0494	nUDIX hydrolase
NDN13_12415	COG0598	Magnesium transport protein CorA
NDN13_12430	COG2854	intermembrane phospholipid transfer
NDN13_12435	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NDN13_12440	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
NDN13_12445	COG1127	ABC transporter
NDN13_12480	COG0408	coproporphyrinogen oxidase activity
NDN13_12485	COG0406	alpha-ribazole phosphatase activity
NDN13_12500	COG1960	acyl-CoA dehydrogenase activity
NDN13_12510	COG1983	PspC domain protein
NDN13_12520	COG0471	metal ion transport
NDN13_12575	COG1404	Belongs to the peptidase S8 family
NDN13_12610	COG2226	methyltransferase
NDN13_12620	COG1192	Involved in chromosome partitioning
NDN13_12625	COG0628	permease
NDN13_12635	COG1289	transmembrane transporter activity
NDN13_12655	COG2249	NAD(P)H dehydrogenase (quinone) activity
NDN13_12660	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
NDN13_12710	COG0277	FAD linked oxidase domain protein
NDN13_12715	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NDN13_12720	COG5006	permease, DMT superfamily
NDN13_12735	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NDN13_12740	COG0335	large ribosomal subunit rRNA binding
NDN13_12750	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NDN13_12755	COG0228	four-way junction DNA binding
NDN13_12825	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NDN13_12830	COG0194	GDP metabolic process
NDN13_12840	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NDN13_12860	COG3307	-O-antigen
NDN13_12895	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
NDN13_12900	COG1704	LemA family
NDN13_12915	COG0493	'glutamate synthase
NDN13_12920	COG0067	glutamate synthase
NDN13_12920	COG0069	glutamate synthase activity
NDN13_12920	COG0070	glutamate synthase
NDN13_12970	COG2226	methyltransferase
NDN13_12980	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
NDN13_12985	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NDN13_13005	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
NDN13_13030	COG0833	amino acid
NDN13_13095	COG0488	(ABC) transporter
NDN13_13105	COG4221	oxidoreductase activity
NDN13_13115	COG0789	Transcriptional regulator
NDN13_13120	COG0477	Major facilitator Superfamily
NDN13_13130	COG2851	Citrate transporter
NDN13_13135	COG0583	DNA-binding transcription factor activity
NDN13_13140	COG1028	Short-chain dehydrogenase reductase Sdr
NDN13_13190	COG0427	acetyl-CoA hydrolase
NDN13_13230	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NDN13_13250	COG0659	secondary active sulfate transmembrane transporter activity
NDN13_13295	COG0107	imidazoleglycerol-phosphate synthase activity
NDN13_13310	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NDN13_13325	COG3158	transport of potassium into the cell
NDN13_13380	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
NDN13_13390	COG1335	isochorismatase
NDN13_13405	COG1335	isochorismatase
NDN13_13415	COG2814	Major facilitator Superfamily
NDN13_13425	COG0351	phosphomethylpyrimidine kinase
NDN13_13425	COG0352	thiamine-phosphate diphosphorylase activity
NDN13_13425	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
NDN13_13440	COG1309	transcriptional regulator
NDN13_13455	COG1522	sequence-specific DNA binding
NDN13_13465	COG1113	amino acid transport
NDN13_13505	COG1522	sequence-specific DNA binding
NDN13_13510	COG1335	isochorismatase
NDN13_13515	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NDN13_13525	COG0668	transmembrane transport
NDN13_13530	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NDN13_13535	COG1519	Transferase
NDN13_13545	COG1902	pentaerythritol trinitrate reductase activity
NDN13_13570	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
NDN13_13590	COG0426	domain, Protein
NDN13_13590	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NDN13_13595	COG2119	membrane
NDN13_13640	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
NDN13_13660	COG0189	ligase activity
NDN13_13665	COG0386	Belongs to the glutathione peroxidase family
NDN13_13670	COG1846	Transcriptional regulator
NDN13_13705	COG0300	oxidoreductase activity
NDN13_13715	COG1181	Belongs to the D-alanine--D-alanine ligase family
NDN13_13725	COG0708	Exodeoxyribonuclease III
NDN13_13730	COG1393	Belongs to the ArsC family
NDN13_13820	COG3150	esterase
NDN13_13855	COG5632	N-Acetylmuramoyl-L-alanine amidase
NDN13_13855	COG3409	Peptidoglycan-binding domain 1 protein
NDN13_13855	COG1388	LysM domain
NDN13_13870	COG2918	glutathione biosynthetic process
NDN13_13885	COG2733	membrane
NDN13_13890	COG0436	Aminotransferase
NDN13_13895	COG0534	Mate efflux family protein
NDN13_13930	COG0583	DNA-binding transcription factor activity
NDN13_13935	COG0583	DNA-binding transcription factor activity
NDN13_13950	COG0583	DNA-binding transcription factor activity
NDN13_13975	COG0753	catalase activity
NDN13_13995	COG3830	Belongs to the UPF0237 family
NDN13_13995	COG0560	Phosphoserine phosphatase
NDN13_14020	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
NDN13_14025	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
NDN13_14035	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NDN13_14045	COG1522	sequence-specific DNA binding
NDN13_14050	COG1335	isochorismatase
NDN13_14055	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NDN13_14065	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
NDN13_14090	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
NDN13_14100	COG2133	pyrroloquinoline quinone binding
NDN13_14105	COG2983	Belongs to the UPF0260 family
NDN13_14110	COG5487	UPF0391 membrane protein
NDN13_14120	COG1194	a g-specific adenine glycosylase
NDN13_14135	COG2818	Glycosylase
NDN13_14140	COG1064	alcohol dehydrogenase
NDN13_14145	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NDN13_14155	COG0583	DNA-binding transcription factor activity
NDN13_14160	COG0656	L-ascorbic acid biosynthetic process
NDN13_14165	COG2814	Major facilitator Superfamily
NDN13_14200	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NDN13_14205	COG1309	transcriptional regulator
NDN13_14215	COG2233	PERMEase
NDN13_14220	COG1028	Short-chain dehydrogenase reductase Sdr
NDN13_14225	COG0583	DNA-binding transcription factor activity
NDN13_14230	COG0583	DNA-binding transcription factor activity
NDN13_14270	COG0733	neurotransmitter:sodium symporter activity
NDN13_14275	COG1012	belongs to the aldehyde dehydrogenase family
NDN13_14285	COG3273	potassium ion transport
NDN13_14285	COG0471	metal ion transport
NDN13_14325	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NDN13_14330	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
NDN13_14360	COG0488	(ABC) transporter
NDN13_14365	COG0586	Pfam SNARE associated Golgi protein
NDN13_14380	COG0187	DNA topoisomerase II activity
NDN13_14390	COG0592	DNA-directed DNA polymerase activity
NDN13_14415	COG0706	membrane insertase activity
NDN13_14435	COG2261	transglycosylase associated protein
NDN13_14445	COG0402	S-adenosylhomocysteine deaminase activity
NDN13_14455	COG0861	Integral membrane protein TerC family
NDN13_14465	COG0583	DNA-binding transcription factor activity
NDN13_14470	COG1960	acyl-CoA dehydrogenase activity
NDN13_14495	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NDN13_14515	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NDN13_14525	COG2951	lytic endotransglycosylase activity
NDN13_14555	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NDN13_14560	COG0443	Heat shock 70 kDa protein
NDN13_14570	COG0583	DNA-binding transcription factor activity
NDN13_14585	COG0657	acetylesterase activity
NDN13_14590	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NDN13_14635	COG1047	Peptidyl-prolyl cis-trans
NDN13_14645	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NDN13_14650	COG0196	riboflavin kinase activity
NDN13_14670	COG1309	transcriptional regulator
NDN13_14675	COG1116	anion transmembrane transporter activity
NDN13_14680	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NDN13_14685	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NDN13_14690	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NDN13_14695	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NDN13_14700	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
NDN13_14700	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
NDN13_14710	COG1028	Short-chain dehydrogenase reductase Sdr
NDN13_14715	COG0546	phosphoglycolate phosphatase activity
NDN13_14775	COG3023	N-Acetylmuramoyl-L-alanine amidase
NDN13_14780	COG0728	peptidoglycan biosynthetic process
NDN13_14805	COG1596	polysaccharide export
NDN13_14815	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
NDN13_14840	COG0297	glycogen (starch) synthase activity
NDN13_14840	COG0438	transferase activity, transferring glycosyl groups
NDN13_14850	COG1215	transferase activity, transferring glycosyl groups
NDN13_14860	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
NDN13_14865	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NDN13_14880	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NDN13_14885	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NDN13_14895	COG2186	Transcriptional regulator
NDN13_14905	COG0277	FAD linked oxidase domain protein
NDN13_14910	COG1448	Aminotransferase
NDN13_14915	COG1802	Transcriptional regulator
NDN13_14935	COG4456	Virulence-associated protein
NDN13_14940	COG1487	ribonuclease activity
NDN13_14975	COG0564	pseudouridine synthase activity
NDN13_14980	COG0456	acetyltransferase
NDN13_15010	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
NDN13_15015	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
NDN13_15080	COG0251	oxidation-reduction process
NDN13_15085	COG1113	amino acid transport
NDN13_15105	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NDN13_15110	COG1960	acyl-CoA dehydrogenase activity
NDN13_15115	COG1024	Enoyl-CoA hydratase
NDN13_15125	COG0477	Major facilitator Superfamily
NDN13_15145	COG0271	Belongs to the BolA IbaG family
NDN13_15155	COG1192	Involved in chromosome partitioning
NDN13_15170	COG0586	Pfam SNARE associated Golgi protein
NDN13_15175	COG2259	Doxx family
NDN13_15180	COG3111	PFAM Bacterial OB fold (BOF) protein
NDN13_15185	COG4399	Belongs to the UPF0754 family
NDN13_15190	COG0519	Catalyzes the synthesis of GMP from XMP
NDN13_15190	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NDN13_15210	COG0735	belongs to the Fur family
NDN13_15250	COG2837	iron assimilation
NDN13_15255	COG1280	lysine exporter protein (LysE YggA)
NDN13_15260	COG1108	ABC-type Mn2 Zn2 transport systems permease components
NDN13_15265	COG1121	(ABC) transporter
NDN13_15305	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NDN13_15315	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NDN13_15320	COG0355	proton-transporting ATP synthase activity, rotational mechanism
NDN13_15345	COG0386	Belongs to the glutathione peroxidase family
NDN13_15360	COG2814	Major facilitator Superfamily
NDN13_15365	COG1309	transcriptional regulator
NDN13_15380	COG0758	DNA mediated transformation
NDN13_15385	COG1652	LysM domain
NDN13_15415	COG0784	Response regulator, receiver
NDN13_15415	COG2205	protein histidine kinase activity
NDN13_15420	COG3162	membrane
NDN13_15425	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NDN13_15450	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NDN13_15490	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NDN13_15510	COG0655	NAD(P)H dehydrogenase (quinone) activity
NDN13_15520	COG0789	Transcriptional regulator
NDN13_15530	COG2814	Major facilitator Superfamily
NDN13_15560	COG4452	Inner membrane protein CreD
NDN13_15565	COG2205	protein histidine kinase activity
NDN13_15570	COG0745	RESPONSE REGULATOR receiver
NDN13_15575	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NDN13_15610	COG1253	flavin adenine dinucleotide binding
NDN13_15620	COG2860	membrane
NDN13_15655	COG0318	PFAM AMP-dependent synthetase and ligase
NDN13_15670	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
NDN13_15705	COG0347	Belongs to the P(II) protein family
NDN13_15710	COG0004	ammonium transporteR
NDN13_15720	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NDN13_15720	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NDN13_15755	COG0795	lipopolysaccharide-transporting ATPase activity
NDN13_15760	COG0795	lipopolysaccharide-transporting ATPase activity
NDN13_15765	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NDN13_15770	COG0793	Belongs to the peptidase S41A family
NDN13_15785	COG2197	response regulator
NDN13_15805	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
NDN13_15815	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NDN13_15820	COG4974	Belongs to the 'phage' integrase family
NDN13_15845	COG0772	Belongs to the SEDS family
NDN13_15850	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NDN13_15855	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
NDN13_15895	COG3275	phosphorelay sensor kinase activity
NDN13_15905	COG0181	hydroxymethylbilane synthase activity
NDN13_15950	COG1716	ATPase activity
NDN13_15955	COG0546	phosphoglycolate phosphatase activity
NDN13_16005	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NDN13_16055	COG2056	Na+-H+ antiporter family
NDN13_16070	COG0326	Molecular chaperone. Has ATPase activity
NDN13_16090	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
NDN13_16100	COG1132	(ABC) transporter
NDN13_16160	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NDN13_16190	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NDN13_16200	COG0497	DNA recombination
NDN13_16210	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NDN13_16220	COG0237	dephospho-CoA kinase activity
NDN13_16245	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
NDN13_16270	COG0195	Participates in both transcription termination and antitermination
NDN13_16280	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NDN13_16285	COG1320	monovalent cation:proton antiporter activity
NDN13_16290	COG2212	antiporter activity
NDN13_16295	COG1863	multisubunit Na H antiporter MnhE subunit
NDN13_16300	COG0651	ATP synthesis coupled electron transport
NDN13_16305	COG1006	Multisubunit Na H antiporter MnhC subunit
NDN13_16310	COG2111	Na H antiporter
NDN13_16310	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
NDN13_16315	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NDN13_16325	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NDN13_16340	COG3038	cytochrome b561
NDN13_16345	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
NDN13_16355	COG2226	methyltransferase
NDN13_16380	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
NDN13_16385	COG1074	ATP-dependent DNA helicase activity
NDN13_16390	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NDN13_16395	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
NDN13_16400	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NDN13_16405	COG1185	polyribonucleotide nucleotidyltransferase activity
NDN13_16410	COG1301	dicarboxylic acid transport
NDN13_16415	COG0598	Magnesium transport protein CorA
NDN13_16420	COG0789	Transcriptional regulator
NDN13_16435	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NDN13_16445	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NDN13_16470	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NDN13_16475	COG0815	Transfers the fatty acyl group on membrane lipoproteins
NDN13_16480	COG4535	Mg2 and Co2 transporter CorC
NDN13_16485	COG0425	Belongs to the sulfur carrier protein TusA family
NDN13_16490	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
NDN13_16490	COG0644	oxidoreductase
NDN13_16500	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
NDN13_16515	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NDN13_16525	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
NDN13_16535	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
NDN13_16535	COG0493	'glutamate synthase
NDN13_16550	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NDN13_16555	COG1309	transcriptional regulator
NDN13_16560	COG1028	Short-chain dehydrogenase reductase Sdr
NDN13_16590	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
NDN13_16595	COG0534	Mate efflux family protein
NDN13_16605	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NDN13_16620	COG0318	PFAM AMP-dependent synthetase and ligase
NDN13_16625	COG1530	ribonuclease E activity
NDN13_16635	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NDN13_16645	COG0625	glutathione transferase activity
NDN13_16650	COG0583	DNA-binding transcription factor activity
NDN13_16670	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
NDN13_16690	COG0494	nUDIX hydrolase
NDN13_16725	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NDN13_16740	COG0473	3-isopropylmalate dehydrogenase activity
NDN13_16815	COG1560	Kdo2-lipid A biosynthetic process
NDN13_16820	COG0583	DNA-binding transcription factor activity
NDN13_16835	COG0667	Aldo Keto reductase
NDN13_16840	COG1012	belongs to the aldehyde dehydrogenase family
NDN13_16845	COG0477	Major facilitator Superfamily
NDN13_16850	COG0488	(ABC) transporter
NDN13_16855	COG2900	Belongs to the SlyX family
NDN13_16865	COG1733	regulation of RNA biosynthetic process
NDN13_16890	COG0210	DNA helicase
NDN13_16920	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NDN13_16920	COG4651	solute:proton antiporter activity
NDN13_16945	COG0788	formyltetrahydrofolate deformylase activity
NDN13_16985	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NDN13_16990	COG3878	Protein conserved in bacteria
NDN13_17015	COG4773	Receptor
NDN13_17030	COG1702	phosphate starvation-inducible protein PhoH
NDN13_17040	COG1196	nuclear chromosome segregation
NDN13_17040	COG0741	lytic transglycosylase activity
NDN13_17040	COG0739	heme binding
NDN13_17070	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
NDN13_17075	COG1183	phosphatidylcholine synthase activity
NDN13_17130	COG1960	acyl-CoA dehydrogenase activity
NDN13_17145	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NDN13_17150	COG1309	transcriptional regulator
NDN13_17170	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NDN13_17175	COG1960	acyl-CoA dehydrogenase activity
NDN13_17230	COG2969	positive regulation of protein catabolic process
NDN13_17235	COG0625	glutathione transferase activity
NDN13_17245	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
NDN13_17250	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NDN13_17265	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
NDN13_17270	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NDN13_17275	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
NDN13_17330	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NDN13_17350	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NDN13_17355	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NDN13_17370	COG1216	Glycosyl transferase, family 2
NDN13_17380	COG2986	histidine ammonia-lyase
NDN13_17420	COG1028	Short-chain dehydrogenase reductase Sdr
NDN13_17425	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NDN13_17440	COG1953	Uracil, thiamine, allantoin
NDN13_17450	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NDN13_17460	COG1862	Preprotein translocase
NDN13_17495	COG5002	protein histidine kinase activity
NDN13_17500	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
NDN13_17520	COG0438	transferase activity, transferring glycosyl groups
NDN13_17575	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
NDN13_17625	COG1960	acyl-CoA dehydrogenase activity
NDN13_17630	COG1960	acyl-CoA dehydrogenase activity
NDN13_17640	COG2205	protein histidine kinase activity
NDN13_17645	COG0745	RESPONSE REGULATOR receiver
NDN13_17655	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
NDN13_17675	COG2096	Adenosyltransferase
NDN13_17680	COG4206	TonB-dependent receptor
NDN13_17740	COG0285	dihydrofolate synthase activity
NDN13_17765	COG0450	alkyl hydroperoxide reductase
NDN13_17785	COG0477	Major facilitator Superfamily
NDN13_17790	COG1272	protein, Hemolysin III
NDN13_17825	COG0183	Belongs to the thiolase family
NDN13_17850	COG0454	-acetyltransferase
NDN13_17855	COG2207	Transcriptional regulator
NDN13_17860	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NDN13_17875	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NDN13_17890	COG0183	Belongs to the thiolase family
NDN13_17900	COG2885	chlorophyll binding
NDN13_17900	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
NDN13_17905	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
NDN13_17905	COG2885	chlorophyll binding
NDN13_17915	COG1690	Belongs to the RtcB family
NDN13_17920	COG0833	amino acid
NDN13_17930	COG2233	PERMEase
NDN13_17935	COG1217	gtp-binding protein TYPA
NDN13_17960	COG4772	TonB-dependent receptor
NDN13_17970	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NDN13_17985	COG0354	folic acid binding
NDN13_18000	COG3189	MarR family transcriptional regulator
NDN13_18005	COG2824	Alkylphosphonate utilization operon protein PhnA
NDN13_18010	COG3422	double-strand break repair
NDN13_18040	COG0840	transmembrane signaling receptor activity
NDN13_18055	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NDN13_18060	COG5510	response to toxic substance
NDN13_18070	COG2832	Protein of unknown function (DUF454)
NDN13_18075	COG1376	ErfK ybiS ycfS ynhG family protein
NDN13_18130	COG1289	transmembrane transporter activity
NDN13_18135	COG2814	Major facilitator Superfamily
NDN13_18150	COG0786	glutamate:sodium symporter activity
NDN13_18155	COG1115	amino acid carrier protein
NDN13_18160	COG1752	Esterase of the alpha-beta hydrolase superfamily
NDN13_18165	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
NDN13_18170	COG3590	peptidase
NDN13_18220	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NDN13_18230	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NDN13_18235	COG1077	Cell shape determining protein MreB Mrl
NDN13_18240	COG1792	Involved in formation and maintenance of cell shape
NDN13_18250	COG0424	maF-like protein
NDN13_18255	COG1530	ribonuclease E activity
NDN13_18265	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NDN13_18275	COG0560	Phosphoserine phosphatase
NDN13_18290	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
NDN13_18295	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
NDN13_18300	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
NDN13_18305	COG2205	protein histidine kinase activity
NDN13_18310	COG0745	RESPONSE REGULATOR receiver
NDN13_18315	COG0318	PFAM AMP-dependent synthetase and ligase
NDN13_18340	COG2207	Transcriptional regulator
NDN13_18345	COG2851	Citrate transporter
NDN13_18355	COG0671	phosphoesterase, PA-phosphatase related
NDN13_18360	COG0174	glutamine synthetase
NDN13_18370	COG1113	amino acid transport
NDN13_18380	COG0142	geranyltranstransferase activity
NDN13_18385	COG2315	Protein conserved in bacteria
NDN13_18400	COG1752	Esterase of the alpha-beta hydrolase superfamily
NDN13_18420	COG2194	sulfuric ester hydrolase activity
NDN13_18425	COG0745	RESPONSE REGULATOR receiver
NDN13_18430	COG0642	Histidine kinase
NDN13_18445	COG1126	abc transporter atp-binding protein
NDN13_18450	COG0765	amino acid transport
NDN13_18455	COG0765	amino acid transport
NDN13_18465	COG0004	ammonium transporteR
NDN13_18470	COG2031	fatty acid transporter
NDN13_18485	COG0583	DNA-binding transcription factor activity
NDN13_18490	COG2610	gluconate transmembrane transporter activity
NDN13_18495	COG1028	Short-chain dehydrogenase reductase Sdr
NDN13_18515	COG2852	Protein conserved in bacteria
NDN13_18525	COG0525	valine-tRNA ligase activity
NDN13_18540	COG1028	Short-chain dehydrogenase reductase Sdr
NDN13_18555	COG0393	Putative heavy-metal-binding
NDN13_18560	COG0393	Putative heavy-metal-binding
NDN13_18565	COG1538	Outer membrane efflux protein
NDN13_18575	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NDN13_18580	COG0671	phosphoesterase, PA-phosphatase related
NDN13_18610	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
NDN13_18625	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NDN13_18625	COG1648	precorrin-2 dehydrogenase activity
NDN13_18630	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
NDN13_18640	COG1733	regulation of RNA biosynthetic process
NDN13_18660	COG0531	amino acid
NDN13_18675	COG0321	lipoyl(octanoyl) transferase activity
NDN13_18680	COG2921	Belongs to the UPF0250 family
NDN13_18700	COG1280	lysine exporter protein (LysE YggA)
NDN13_18710	COG0586	Pfam SNARE associated Golgi protein
NDN13_18715	COG1054	Belongs to the UPF0176 family
NDN13_18740	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
NDN13_18745	COG1053	succinate dehydrogenase
NDN13_18750	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
NDN13_18770	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NDN13_18795	COG2268	Band 7 protein
NDN13_18800	COG1585	Membrane protein implicated in regulation of membrane protease activity
NDN13_18810	COG2354	Protein conserved in bacteria
NDN13_18815	COG2321	neutral zinc metallopeptidase
NDN13_18835	COG2843	Capsule synthesis protein
NDN13_18855	COG0589	response to stress
NDN13_18880	COG0505	Belongs to the CarA family
NDN13_18905	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NDN13_18910	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NDN13_18920	COG2304	oxidoreductase activity
NDN13_18925	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NDN13_18950	COG0584	glycerophosphoryl diester phosphodiesterase
NDN13_18965	COG2239	Acts as a magnesium transporter
NDN13_18975	COG0501	Belongs to the peptidase M48B family
NDN13_18980	COG0741	lytic transglycosylase activity
NDN13_19000	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NDN13_19010	COG1279	arginine transmembrane transporter activity
NDN13_19020	COG0583	DNA-binding transcription factor activity
NDN13_19040	COG1607	acyl-coa hydrolase
NDN13_19050	COG0523	cobalamin synthesis protein
NDN13_19055	COG4681	YaeQ
NDN13_19070	COG0726	polysaccharide deacetylase
NDN13_19070	COG1649	PFAM Uncharacterised BCR, COG1649
NDN13_19075	COG1215	transferase activity, transferring glycosyl groups
NDN13_19115	COG2388	GCN5-related N-acetyl-transferase
NDN13_19125	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NDN13_19150	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
NDN13_19155	COG1597	lipid kinase activity
NDN13_19190	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
NDN13_19205	COG1262	PFAM Formylglycine-generating sulfatase enzyme
NDN13_19225	COG4771	TonB-dependent receptor
NDN13_19240	COG0288	reversible hydration of carbon dioxide
NDN13_19255	COG4181	ATPase activity
NDN13_19260	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
NDN13_19265	COG0457	Tetratricopeptide repeat
NDN13_19265	COG0705	Rhomboid family
NDN13_19305	COG1215	transferase activity, transferring glycosyl groups
NDN13_19320	COG0415	Belongs to the DNA photolyase family
NDN13_19330	COG1252	NADH dehydrogenase
NDN13_19335	COG1686	Belongs to the peptidase S11 family
NDN13_19345	COG2351	hydroxyisourate hydrolase activity
NDN13_19375	COG1187	pseudouridine synthase activity
NDN13_19415	COG0612	Peptidase, M16
NDN13_19430	COG3025	triphosphatase activity
NDN13_19445	COG1203	CRISPR-associated helicase, Cas3
NDN13_19485	COG0564	pseudouridine synthase activity
NDN13_19495	COG0783	Belongs to the Dps family
NDN13_19505	COG1309	transcriptional regulator
NDN13_19535	COG4772	TonB-dependent receptor
NDN13_19540	COG4772	TonB-dependent receptor
NDN13_19550	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NDN13_19555	COG0076	glutamate decarboxylase activity
NDN13_19565	COG1012	belongs to the aldehyde dehydrogenase family
NDN13_19570	COG1522	sequence-specific DNA binding
NDN13_19575	COG3961	Belongs to the TPP enzyme family
NDN13_19580	COG1113	amino acid transport
NDN13_19590	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
NDN13_19595	COG0573	inorganic phosphate transmembrane transporter activity
NDN13_19605	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
NDN13_19610	COG0616	signal peptide processing
NDN13_19635	COG0742	ribosomal rna small subunit methyltransferase
NDN13_19640	COG0768	penicillin binding
NDN13_19665	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NDN13_19670	COG2878	Part of a membrane complex involved in electron transport
NDN13_19675	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NDN13_19685	COG3384	dioxygenase
NDN13_19700	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family