locus-tag	class	description
EGY13_00020	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
EGY13_00055	COG0741	lytic transglycosylase activity
EGY13_00150	COG0484	heat shock protein binding
EGY13_00265	COG1475	DNA binding
EGY13_00330	COG1525	nuclease
EGY13_00400	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
EGY13_00475	COG4771	TonB-dependent receptor
EGY13_00495	COG0758	DNA mediated transformation
EGY13_00505	COG0697	spore germination
EGY13_00510	COG1309	transcriptional regulator
EGY13_00525	COG0386	Belongs to the glutathione peroxidase family
EGY13_00590	COG1121	(ABC) transporter
EGY13_00595	COG1108	ABC-type Mn2 Zn2 transport systems permease components
EGY13_00600	COG1280	lysine exporter protein (LysE YggA)
EGY13_00605	COG2837	iron assimilation
EGY13_00610	COG0281	malic enzyme
EGY13_00655	COG0518	GMP synthase (glutamine-hydrolyzing) activity
EGY13_00655	COG0519	Catalyzes the synthesis of GMP from XMP
EGY13_00660	COG4399	Belongs to the UPF0754 family
EGY13_00665	COG2259	Doxx family
EGY13_00670	COG0586	Pfam SNARE associated Golgi protein
EGY13_00685	COG1192	Involved in chromosome partitioning
EGY13_00695	COG0271	Belongs to the BolA IbaG family
EGY13_00715	COG2267	carboxylic ester hydrolase activity
EGY13_00735	COG3316	Transposase and inactivated derivatives
EGY13_00775	COG0697	spore germination
EGY13_00865	COG3316	Transposase and inactivated derivatives
EGY13_00875	COG2197	response regulator
EGY13_00885	COG3916	Acyl-homoserine-lactone synthase
EGY13_00890	COG0477	Major facilitator Superfamily
EGY13_00895	COG1024	Enoyl-CoA hydratase
EGY13_00900	COG1024	Enoyl-CoA hydratase
EGY13_00905	COG1960	acyl-CoA dehydrogenase activity
EGY13_00910	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
EGY13_00930	COG1113	amino acid transport
EGY13_00935	COG1113	amino acid transport
EGY13_00940	COG0251	oxidation-reduction process
EGY13_00955	COG1522	sequence-specific DNA binding
EGY13_00980	COG0564	pseudouridine synthase activity
EGY13_01045	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
EGY13_01060	COG1802	Transcriptional regulator
EGY13_01070	COG1448	Aminotransferase
EGY13_01075	COG0277	FAD linked oxidase domain protein
EGY13_01085	COG2186	Transcriptional regulator
EGY13_01090	COG1620	l-lactate permease
EGY13_01095	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EGY13_01100	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
EGY13_01115	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_01125	COG1210	Utp--glucose-1-phosphate uridylyltransferase
EGY13_01135	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
EGY13_01145	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
EGY13_01150	COG0438	transferase activity, transferring glycosyl groups
EGY13_01160	COG0438	transferase activity, transferring glycosyl groups
EGY13_01180	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
EGY13_01210	COG0728	peptidoglycan biosynthetic process
EGY13_01215	COG3023	N-Acetylmuramoyl-L-alanine amidase
EGY13_01270	COG0546	phosphoglycolate phosphatase activity
EGY13_01275	COG1028	Short-chain dehydrogenase reductase Sdr
EGY13_01295	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
EGY13_01300	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
EGY13_01305	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
EGY13_01310	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
EGY13_01315	COG1116	anion transmembrane transporter activity
EGY13_01320	COG1309	transcriptional regulator
EGY13_01325	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
EGY13_01335	COG0196	riboflavin kinase activity
EGY13_01340	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
EGY13_01350	COG1047	Peptidyl-prolyl cis-trans
EGY13_01390	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
EGY13_01445	COG2951	lytic endotransglycosylase activity
EGY13_01450	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
EGY13_01470	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
EGY13_01480	COG0671	phosphoesterase, PA-phosphatase related
EGY13_01485	COG0861	Integral membrane protein TerC family
EGY13_01495	COG0754	glutathionylspermidine amidase activity
EGY13_01505	COG0402	S-adenosylhomocysteine deaminase activity
EGY13_01520	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
EGY13_01525	COG1230	cation diffusion facilitator family transporter
EGY13_01540	COG0706	membrane insertase activity
EGY13_01555	COG0230	Belongs to the bacterial ribosomal protein bL34 family
EGY13_01565	COG0592	DNA-directed DNA polymerase activity
EGY13_01575	COG0187	DNA topoisomerase II activity
EGY13_01585	COG0586	Pfam SNARE associated Golgi protein
EGY13_01590	COG0488	(ABC) transporter
EGY13_01615	COG0596	Alpha beta hydrolase
EGY13_01620	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
EGY13_01625	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
EGY13_01670	COG0733	neurotransmitter:sodium symporter activity
EGY13_01705	COG0583	DNA-binding transcription factor activity
EGY13_01710	COG2233	PERMEase
EGY13_01725	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EGY13_01760	COG2814	Major facilitator Superfamily
EGY13_01765	COG0656	L-ascorbic acid biosynthetic process
EGY13_01770	COG0583	DNA-binding transcription factor activity
EGY13_01780	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_01790	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EGY13_01795	COG1064	alcohol dehydrogenase
EGY13_01800	COG2818	Glycosylase
EGY13_01815	COG1194	a g-specific adenine glycosylase
EGY13_01835	COG2983	Belongs to the UPF0260 family
EGY13_01840	COG2133	pyrroloquinoline quinone binding
EGY13_01845	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
EGY13_01850	COG2116	formate transmembrane transporter activity
EGY13_01870	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EGY13_01875	COG1335	isochorismatase
EGY13_01880	COG0385	Bile acid
EGY13_01885	COG0534	Mate efflux family protein
EGY13_01890	COG1683	Conserved Protein
EGY13_01910	COG0625	glutathione transferase activity
EGY13_01920	COG1113	amino acid transport
EGY13_01930	COG0523	cobalamin synthesis protein
EGY13_01940	COG2188	Transcriptional regulator
EGY13_01970	COG0010	Belongs to the arginase family
EGY13_01980	COG0546	phosphoglycolate phosphatase activity
EGY13_01990	COG1280	lysine exporter protein (LysE YggA)
EGY13_02005	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
EGY13_02015	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
EGY13_02020	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
EGY13_02110	COG0534	Mate efflux family protein
EGY13_02115	COG0436	Aminotransferase
EGY13_02120	COG2733	membrane
EGY13_02135	COG2918	glutathione biosynthetic process
EGY13_02145	COG3501	Rhs element vgr protein
EGY13_02150	COG3409	Peptidoglycan-binding domain 1 protein
EGY13_02150	COG1388	LysM domain
EGY13_02150	COG5632	N-Acetylmuramoyl-L-alanine amidase
EGY13_02170	COG3150	esterase
EGY13_02180	COG1028	Short-chain dehydrogenase reductase Sdr
EGY13_02185	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
EGY13_02195	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
EGY13_02205	COG2233	PERMEase
EGY13_02210	COG2351	hydroxyisourate hydrolase activity
EGY13_02245	COG3706	GGDEF domain
EGY13_02260	COG1393	Belongs to the ArsC family
EGY13_02265	COG0708	Exodeoxyribonuclease III
EGY13_02285	COG0189	ligase activity
EGY13_02305	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
EGY13_02315	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
EGY13_02330	COG4942	peptidase
EGY13_02340	COG0508	dehydrogenase complex catalyzes the overall conversion of
EGY13_02350	COG2119	membrane
EGY13_02355	COG4774	siderophore transport
EGY13_02360	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
EGY13_02360	COG0426	domain, Protein
EGY13_02385	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
EGY13_02410	COG1902	pentaerythritol trinitrate reductase activity
EGY13_02415	COG1519	Transferase
EGY13_02420	COG1385	rRNA (uridine-N3-)-methyltransferase activity
EGY13_02425	COG0668	transmembrane transport
EGY13_02435	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
EGY13_02440	COG1335	isochorismatase
EGY13_02445	COG1522	sequence-specific DNA binding
EGY13_02470	COG0784	Response regulator, receiver
EGY13_02470	COG2205	protein histidine kinase activity
EGY13_02470	COG2198	Histidine kinase
EGY13_02475	COG3162	membrane
EGY13_02480	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
EGY13_02490	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
EGY13_02500	COG3706	GGDEF domain
EGY13_02505	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
EGY13_02510	COG1309	transcriptional regulator
EGY13_02530	COG0352	thiamine-phosphate diphosphorylase activity
EGY13_02530	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
EGY13_02530	COG0351	phosphomethylpyrimidine kinase
EGY13_02540	COG2814	Major facilitator Superfamily
EGY13_02555	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
EGY13_02565	COG1113	amino acid transport
EGY13_02575	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
EGY13_02580	COG1012	belongs to the aldehyde dehydrogenase family
EGY13_02590	COG1335	isochorismatase
EGY13_02620	COG2814	Major facilitator Superfamily
EGY13_02625	COG0583	DNA-binding transcription factor activity
EGY13_02645	COG0667	Aldo Keto reductase
EGY13_02680	COG1733	regulation of RNA biosynthetic process
EGY13_02685	COG2249	NAD(P)H dehydrogenase (quinone) activity
EGY13_02695	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
EGY13_02750	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
EGY13_02790	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
EGY13_02820	COG0427	acetyl-CoA hydrolase
EGY13_02835	COG0745	RESPONSE REGULATOR receiver
EGY13_02845	COG0659	secondary active sulfate transmembrane transporter activity
EGY13_02850	COG4221	oxidoreductase activity
EGY13_02860	COG0488	(ABC) transporter
EGY13_02925	COG0833	amino acid
EGY13_02970	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
EGY13_02975	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
EGY13_02990	COG2226	methyltransferase
EGY13_03040	COG0069	glutamate synthase activity
EGY13_03040	COG0070	glutamate synthase
EGY13_03040	COG0067	glutamate synthase
EGY13_03045	COG0493	'glutamate synthase
EGY13_03055	COG1704	LemA family
EGY13_03060	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
EGY13_03075	COG3307	-O-antigen
EGY13_03095	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EGY13_03110	COG0194	GDP metabolic process
EGY13_03160	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
EGY13_03180	COG5380	lipid catabolic process
EGY13_03185	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
EGY13_03210	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EGY13_03215	COG0277	FAD linked oxidase domain protein
EGY13_03225	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
EGY13_03230	COG2249	NAD(P)H dehydrogenase (quinone) activity
EGY13_03245	COG1289	transmembrane transporter activity
EGY13_03255	COG0628	permease
EGY13_03260	COG1192	Involved in chromosome partitioning
EGY13_03290	COG0833	amino acid
EGY13_03295	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
EGY13_03300	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
EGY13_03310	COG1012	belongs to the aldehyde dehydrogenase family
EGY13_03350	COG0583	DNA-binding transcription factor activity
EGY13_03395	COG0517	IMP dehydrogenase activity
EGY13_03400	COG1983	PspC domain protein
EGY13_03410	COG1960	acyl-CoA dehydrogenase activity
EGY13_03425	COG0408	coproporphyrinogen oxidase activity
EGY13_03445	COG0513	Belongs to the DEAD box helicase family
EGY13_03455	COG1127	ABC transporter
EGY13_03460	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
EGY13_03470	COG2854	intermembrane phospholipid transfer
EGY13_03480	COG0598	Magnesium transport protein CorA
EGY13_03490	COG0494	nUDIX hydrolase
EGY13_03495	COG1040	competence protein
EGY13_03500	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
EGY13_03520	COG1946	Acyl-CoA thioesterase
EGY13_03525	COG1301	dicarboxylic acid transport
EGY13_03540	COG1959	2 iron, 2 sulfur cluster binding
EGY13_03545	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
EGY13_03545	COG1017	nitric oxide dioxygenase activity
EGY13_03555	COG0433	COG0433 Predicted ATPase
EGY13_03560	COG0626	cystathionine gamma-synthase activity
EGY13_03680	COG0257	Belongs to the bacterial ribosomal protein bL36 family
EGY13_03690	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
EGY13_03715	COG1960	acyl-CoA dehydrogenase activity
EGY13_03720	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
EGY13_03750	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
EGY13_03755	COG0339	signal peptide processing
EGY13_03760	COG0557	exoribonuclease II activity
EGY13_03805	COG0179	Fumarylacetoacetate (FAA) hydrolase
EGY13_03810	COG2169	Transcriptional regulator
EGY13_03820	COG1295	ribonuclease BN
EGY13_03855	COG1702	phosphate starvation-inducible protein PhoH
EGY13_03865	COG0739	heme binding
EGY13_03865	COG0741	lytic transglycosylase activity
EGY13_03865	COG1196	nuclear chromosome segregation
EGY13_03895	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
EGY13_03900	COG1183	phosphatidylcholine synthase activity
EGY13_03945	COG1960	acyl-CoA dehydrogenase activity
EGY13_03950	COG1309	transcriptional regulator
EGY13_03970	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
EGY13_03975	COG1960	acyl-CoA dehydrogenase activity
EGY13_03995	COG2969	positive regulation of protein catabolic process
EGY13_04005	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
EGY13_04020	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
EGY13_04025	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
EGY13_04045	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
EGY13_04055	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EGY13_04060	COG1408	metallophosphoesterase
EGY13_04070	COG2199	diguanylate cyclase activity
EGY13_04115	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EGY13_04115	COG3453	Protein conserved in bacteria
EGY13_04130	COG1607	acyl-coa hydrolase
EGY13_04160	COG2350	Protein conserved in bacteria
EGY13_04170	COG0613	PHP domain protein
EGY13_04175	COG3781	membrane
EGY13_04185	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
EGY13_04190	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
EGY13_04200	COG1862	Preprotein translocase
EGY13_04230	COG2205	protein histidine kinase activity
EGY13_04235	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
EGY13_04255	COG0726	polysaccharide deacetylase
EGY13_04260	COG0463	Glycosyl transferase, family 2
EGY13_04265	COG0438	transferase activity, transferring glycosyl groups
EGY13_04330	COG1960	acyl-CoA dehydrogenase activity
EGY13_04335	COG1960	acyl-CoA dehydrogenase activity
EGY13_04345	COG2205	protein histidine kinase activity
EGY13_04350	COG0745	RESPONSE REGULATOR receiver
EGY13_04355	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
EGY13_04375	COG2096	Adenosyltransferase
EGY13_04390	COG0133	tryptophan synthase activity
EGY13_04425	COG0285	dihydrofolate synthase activity
EGY13_04445	COG0450	alkyl hydroperoxide reductase
EGY13_04460	COG0477	Major facilitator Superfamily
EGY13_04465	COG1272	protein, Hemolysin III
EGY13_04495	COG0183	Belongs to the thiolase family
EGY13_04500	COG2207	Transcriptional regulator
EGY13_04520	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
EGY13_04540	COG0183	Belongs to the thiolase family
EGY13_04550	COG2885	chlorophyll binding
EGY13_04550	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
EGY13_04560	COG1690	Belongs to the RtcB family
EGY13_04565	COG0833	amino acid
EGY13_04575	COG2233	PERMEase
EGY13_04605	COG2094	Belongs to the DNA glycosylase MPG family
EGY13_04610	COG4772	TonB-dependent receptor
EGY13_04615	COG1902	pentaerythritol trinitrate reductase activity
EGY13_04630	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
EGY13_04635	COG0354	folic acid binding
EGY13_04645	COG3189	MarR family transcriptional regulator
EGY13_04650	COG2824	Alkylphosphonate utilization operon protein PhnA
EGY13_04655	COG3422	double-strand break repair
EGY13_04695	COG0840	transmembrane signaling receptor activity
EGY13_04710	COG0635	Involved in the biosynthesis of porphyrin-containing compound
EGY13_04725	COG5510	response to toxic substance
EGY13_04735	COG2832	Protein of unknown function (DUF454)
EGY13_04740	COG1376	ErfK ybiS ycfS ynhG family protein
EGY13_04790	COG1289	transmembrane transporter activity
EGY13_04795	COG2814	Major facilitator Superfamily
EGY13_04815	COG1115	amino acid carrier protein
EGY13_04820	COG1752	Esterase of the alpha-beta hydrolase superfamily
EGY13_04825	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
EGY13_04830	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
EGY13_04835	COG3590	peptidase
EGY13_04860	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
EGY13_04870	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
EGY13_04875	COG1077	Cell shape determining protein MreB Mrl
EGY13_04880	COG1792	Involved in formation and maintenance of cell shape
EGY13_04885	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
EGY13_04890	COG0424	maF-like protein
EGY13_04895	COG1530	ribonuclease E activity
EGY13_04905	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
EGY13_04925	COG2249	NAD(P)H dehydrogenase (quinone) activity
EGY13_04950	COG2207	Transcriptional regulator
EGY13_05015	COG0305	Participates in initiation and elongation during chromosome replication
EGY13_05050	COG0582	viral genome integration into host DNA
EGY13_05095	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
EGY13_05100	COG4197	protein conserved in bacteria, prophage-related
EGY13_05130	COG0305	Participates in initiation and elongation during chromosome replication
EGY13_05155	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
EGY13_05210	COG4626	Terminase
EGY13_05210	COG1802	Transcriptional regulator
EGY13_05215	COG4695	Portal protein
EGY13_05220	COG0740	serine-type endopeptidase activity
EGY13_05340	COG1113	amino acid transport
EGY13_05345	COG2828	Protein conserved in bacteria
EGY13_05350	COG0142	geranyltranstransferase activity
EGY13_05355	COG2315	Protein conserved in bacteria
EGY13_05370	COG1752	Esterase of the alpha-beta hydrolase superfamily
EGY13_05390	COG2194	sulfuric ester hydrolase activity
EGY13_05395	COG0745	RESPONSE REGULATOR receiver
EGY13_05400	COG0642	Histidine kinase
EGY13_05410	COG0004	ammonium transporteR
EGY13_05420	COG0583	DNA-binding transcription factor activity
EGY13_05440	COG0525	valine-tRNA ligase activity
EGY13_05450	COG1028	Short-chain dehydrogenase reductase Sdr
EGY13_05460	COG0393	Putative heavy-metal-binding
EGY13_05465	COG0393	Putative heavy-metal-binding
EGY13_05470	COG1538	Outer membrane efflux protein
EGY13_05480	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EGY13_05485	COG0671	phosphoesterase, PA-phosphatase related
EGY13_05515	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
EGY13_05530	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
EGY13_05530	COG1648	precorrin-2 dehydrogenase activity
EGY13_05535	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
EGY13_05540	COG1733	regulation of RNA biosynthetic process
EGY13_05550	COG0531	amino acid
EGY13_05565	COG0321	lipoyl(octanoyl) transferase activity
EGY13_05570	COG2921	Belongs to the UPF0250 family
EGY13_05605	COG2009	succinate dehydrogenase
EGY13_05610	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
EGY13_05615	COG1053	succinate dehydrogenase
EGY13_05620	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
EGY13_05645	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EGY13_05680	COG2354	Protein conserved in bacteria
EGY13_05685	COG2321	neutral zinc metallopeptidase
EGY13_05695	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_05710	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_05720	COG2843	Capsule synthesis protein
EGY13_05735	COG0589	response to stress
EGY13_05755	COG0505	Belongs to the CarA family
EGY13_05780	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
EGY13_05785	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
EGY13_05835	COG0477	Major facilitator Superfamily
EGY13_05840	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
EGY13_05860	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
EGY13_05885	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EGY13_05890	COG0584	glycerophosphoryl diester phosphodiesterase
EGY13_05910	COG0741	lytic transglycosylase activity
EGY13_05935	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
EGY13_05950	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
EGY13_05975	COG0778	Nitroreductase
EGY13_05990	COG1929	Belongs to the glycerate kinase type-1 family
EGY13_05995	COG0243	molybdopterin cofactor binding
EGY13_06000	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
EGY13_06005	COG3339	Conserved Protein
EGY13_06015	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
EGY13_06030	COG1113	amino acid transport
EGY13_06040	COG0019	diaminopimelate decarboxylase activity
EGY13_06055	COG1280	lysine exporter protein (LysE YggA)
EGY13_06060	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
EGY13_06090	COG0463	Glycosyl transferase, family 2
EGY13_06110	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EGY13_06140	COG4591	ABC-type transport system involved in lipoprotein release permease component
EGY13_06145	COG1136	(ABC) transporter
EGY13_06150	COG0658	competence protein
EGY13_06150	COG2333	competence protein COMEC
EGY13_06160	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
EGY13_06160	COG0616	signal peptide processing
EGY13_06165	COG0596	Alpha beta hydrolase
EGY13_06170	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
EGY13_06180	COG0628	permease
EGY13_06215	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EGY13_06235	COG0823	Involved in the tonB-independent uptake of proteins
EGY13_06255	COG0824	Thioesterase
EGY13_06260	COG1473	amidohydrolase
EGY13_06280	COG0047	phosphoribosylformylglycinamidine synthase activity
EGY13_06280	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
EGY13_06285	COG2814	Major facilitator Superfamily
EGY13_06290	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
EGY13_06295	COG1024	Enoyl-CoA hydratase
EGY13_06300	COG1051	belongs to the nudix hydrolase family
EGY13_06300	COG1056	cytidyltransferase-related domain
EGY13_06310	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
EGY13_06325	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
EGY13_06340	COG4625	pathogenesis
EGY13_06345	COG0583	DNA-binding transcription factor activity
EGY13_06350	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
EGY13_06355	COG4208	sulfate ABC transporter
EGY13_06360	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
EGY13_06370	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
EGY13_06375	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
EGY13_06380	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
EGY13_06400	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
EGY13_06415	COG0681	Belongs to the peptidase S26 family
EGY13_06430	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
EGY13_06440	COG1381	Involved in DNA repair and RecF pathway recombination
EGY13_06445	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
EGY13_06455	COG4221	oxidoreductase activity
EGY13_06505	COG0556	nucleotide-excision repair
EGY13_06560	COG2070	2-Nitropropane dioxygenase
EGY13_06590	COG1215	transferase activity, transferring glycosyl groups
EGY13_06605	COG0415	Belongs to the DNA photolyase family
EGY13_06615	COG1252	NADH dehydrogenase
EGY13_06620	COG1686	Belongs to the peptidase S11 family
EGY13_06635	COG1187	pseudouridine synthase activity
EGY13_06945	COG0582	viral genome integration into host DNA
EGY13_06970	COG0477	Major facilitator Superfamily
EGY13_06975	COG0583	DNA-binding transcription factor activity
EGY13_06990	COG0612	Peptidase, M16
EGY13_07015	COG0352	thiamine-phosphate diphosphorylase activity
EGY13_07050	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
EGY13_07065	COG1309	transcriptional regulator
EGY13_07075	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
EGY13_07080	COG0076	glutamate decarboxylase activity
EGY13_07090	COG1522	sequence-specific DNA binding
EGY13_07095	COG3961	Belongs to the TPP enzyme family
EGY13_07100	COG1113	amino acid transport
EGY13_07105	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
EGY13_07110	COG0573	inorganic phosphate transmembrane transporter activity
EGY13_07120	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
EGY13_07125	COG0616	signal peptide processing
EGY13_07160	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
EGY13_07165	COG1686	Belongs to the peptidase S11 family
EGY13_07190	COG0583	DNA-binding transcription factor activity
EGY13_07195	COG1067	ATP-dependent peptidase activity
EGY13_07240	COG1966	Carbon starvation protein
EGY13_07245	COG2879	small protein
EGY13_07355	COG1802	Transcriptional regulator
EGY13_07355	COG4626	Terminase
EGY13_07475	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
EGY13_07495	COG1741	Belongs to the pirin family
EGY13_07505	COG2964	Protein conserved in bacteria
EGY13_07520	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
EGY13_07525	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
EGY13_07530	COG4605	iron ion homeostasis
EGY13_07535	COG4604	ABC transporter, ATP-binding protein
EGY13_07540	COG4607	ABC-type enterochelin transport system periplasmic component
EGY13_07545	COG4774	siderophore transport
EGY13_07555	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
EGY13_07560	COG1021	2,3-dihydroxybenzoate-AMP ligase
EGY13_07565	COG1535	isochorismatase
EGY13_07565	COG3433	isochorismatase activity
EGY13_07580	COG1132	(ABC) transporter
EGY13_07590	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
EGY13_07615	COG3739	integral membrane protein
EGY13_07650	COG1529	Aldehyde oxidase and xanthine dehydrogenase
EGY13_07680	COG0308	aminopeptidase N
EGY13_07685	COG0512	Glutamine amidotransferase of anthranilate synthase
EGY13_07995	COG0739	heme binding
EGY13_08050	COG0582	viral genome integration into host DNA
EGY13_08060	COG3104	oligopeptide transport
EGY13_08075	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
EGY13_08110	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
EGY13_08115	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
EGY13_08120	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
EGY13_08140	COG1385	rRNA (uridine-N3-)-methyltransferase activity
EGY13_08145	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
EGY13_08150	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
EGY13_08165	COG1960	acyl-CoA dehydrogenase activity
EGY13_08170	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
EGY13_08175	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EGY13_08185	COG2223	nitrite transmembrane transporter activity
EGY13_08195	COG0024	Methionine aminopeptidase
EGY13_08200	COG0052	Belongs to the universal ribosomal protein uS2 family
EGY13_08215	COG2207	Transcriptional regulator
EGY13_08240	COG2951	lytic endotransglycosylase activity
EGY13_08245	COG0772	Belongs to the SEDS family
EGY13_08260	COG0842	Transport permease protein
EGY13_08265	COG1131	(ABC) transporter
EGY13_08300	COG1538	Outer membrane efflux protein
EGY13_08310	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EGY13_08325	COG4215	(ABC) transporter
EGY13_08330	COG4160	amino acid transport
EGY13_08335	COG4598	ABC transporter
EGY13_08345	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
EGY13_08355	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EGY13_08370	COG1720	tRNA m6t6A37 methyltransferase activity
EGY13_08390	COG0745	RESPONSE REGULATOR receiver
EGY13_08395	COG0642	Histidine kinase
EGY13_08405	COG0494	nUDIX hydrolase
EGY13_08415	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
EGY13_08420	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
EGY13_08425	COG3139	Protein of unknown function (DUF1315)
EGY13_08440	COG1301	dicarboxylic acid transport
EGY13_08445	COG1960	acyl-CoA dehydrogenase activity
EGY13_08450	COG2819	hydrolase of the alpha beta superfamily
EGY13_08460	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
EGY13_08470	COG2195	Cleaves the N-terminal amino acid of tripeptides
EGY13_08475	COG1234	tRNA 3'-trailer cleavage
EGY13_08500	COG2363	Small membrane protein
EGY13_08520	COG0513	Belongs to the DEAD box helicase family
EGY13_08530	COG0778	Nitroreductase
EGY13_08560	COG1286	toxin biosynthetic process
EGY13_08585	COG4783	chaperone-mediated protein folding
EGY13_08590	COG1610	YqeY-like protein
EGY13_08595	COG0828	Belongs to the bacterial ribosomal protein bS21 family
EGY13_08620	COG2815	serine threonine protein kinase
EGY13_08620	COG0515	serine threonine protein kinase
EGY13_08690	COG3111	PFAM Bacterial OB fold (BOF) protein
EGY13_08715	COG3243	poly(R)-hydroxyalkanoic acid synthase
EGY13_08720	COG0786	glutamate:sodium symporter activity
EGY13_08730	COG2186	Transcriptional regulator
EGY13_08780	COG0477	Major facilitator Superfamily
EGY13_08805	COG2995	paraquat-inducible protein a
EGY13_08810	COG3008	intermembrane lipid transfer
EGY13_08810	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
EGY13_08825	COG0492	ferredoxin-NADP+ reductase activity
EGY13_08825	COG3118	belongs to the thioredoxin family
EGY13_08830	COG1794	racemase activity, acting on amino acids and derivatives
EGY13_08860	COG1301	dicarboxylic acid transport
EGY13_08870	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EGY13_08875	COG2011	ABC-type metal ion transport system permease component
EGY13_08880	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
EGY13_08885	COG1464	Belongs to the NlpA lipoprotein family
EGY13_08890	COG0151	Belongs to the GarS family
EGY13_08895	COG0138	bifunctional purine biosynthesis protein purh
EGY13_08900	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
EGY13_08930	COG2308	Evidence 4 Homologs of previously reported genes of
EGY13_08940	COG1305	Transglutaminase-like
EGY13_08950	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
EGY13_08955	COG0305	Participates in initiation and elongation during chromosome replication
EGY13_08980	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
EGY13_08990	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
EGY13_08995	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
EGY13_09020	COG1649	PFAM Uncharacterised BCR, COG1649
EGY13_09020	COG0726	polysaccharide deacetylase
EGY13_09025	COG1215	transferase activity, transferring glycosyl groups
EGY13_09030	COG3658	cytochrome
EGY13_09040	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
EGY13_09060	COG0583	DNA-binding transcription factor activity
EGY13_09080	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
EGY13_09085	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
EGY13_09100	COG1960	acyl-CoA dehydrogenase activity
EGY13_09105	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
EGY13_09110	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
EGY13_09135	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
EGY13_09140	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
EGY13_09150	COG2205	protein histidine kinase activity
EGY13_09155	COG0745	RESPONSE REGULATOR receiver
EGY13_09180	COG0729	surface antigen
EGY13_09210	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
EGY13_09215	COG2814	Major facilitator Superfamily
EGY13_09230	COG0583	DNA-binding transcription factor activity
EGY13_09245	COG1187	pseudouridine synthase activity
EGY13_09265	COG0802	atpase or kinase
EGY13_09270	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
EGY13_09280	COG1923	regulation of RNA biosynthetic process
EGY13_09285	COG0697	spore germination
EGY13_09300	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
EGY13_09315	COG0518	GMP synthase (glutamine-hydrolyzing) activity
EGY13_09315	COG0519	Catalyzes the synthesis of GMP from XMP
EGY13_09320	COG4302	ethanolamine ammonia-lyase activity
EGY13_09325	COG4303	Ethanolamine ammonia lyase large subunit
EGY13_09330	COG0531	amino acid
EGY13_09350	COG1454	alcohol dehydrogenase
EGY13_09355	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
EGY13_09380	COG0308	aminopeptidase N
EGY13_09420	COG1605	Chorismate mutase
EGY13_09455	COG1309	transcriptional regulator
EGY13_09465	COG0668	transmembrane transport
EGY13_09495	COG4773	Receptor
EGY13_09520	COG0488	(ABC) transporter
EGY13_09525	COG0589	response to stress
EGY13_09550	COG3135	benzoate transporter
EGY13_09555	COG1522	sequence-specific DNA binding
EGY13_09570	COG0583	DNA-binding transcription factor activity
EGY13_09580	COG0183	Belongs to the thiolase family
EGY13_09585	COG1028	Short-chain dehydrogenase reductase Sdr
EGY13_09610	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
EGY13_09620	COG0824	Thioesterase
EGY13_09625	COG1454	alcohol dehydrogenase
EGY13_09635	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
EGY13_09655	COG0069	glutamate synthase activity
EGY13_09675	COG2814	Major facilitator Superfamily
EGY13_09690	COG0511	ligase activity, forming carbon-carbon bonds
EGY13_09710	COG1116	anion transmembrane transporter activity
EGY13_09710	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
EGY13_09715	COG0745	RESPONSE REGULATOR receiver
EGY13_09725	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
EGY13_09725	COG2146	nitrite reductase [NAD(P)H] activity
EGY13_09730	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
EGY13_09735	COG0243	molybdopterin cofactor binding
EGY13_09745	COG0243	molybdopterin cofactor binding
EGY13_09750	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
EGY13_09765	COG0521	Mo-molybdopterin cofactor biosynthetic process
EGY13_09765	COG0315	cyclic pyranopterin monophosphate synthase activity
EGY13_09770	COG0303	'Molybdopterin
EGY13_09780	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EGY13_09785	COG0697	spore germination
EGY13_09805	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
EGY13_09810	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
EGY13_09870	COG2204	response regulator
EGY13_09875	COG3852	Histidine kinase
EGY13_09900	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
EGY13_09905	COG0575	Belongs to the CDS family
EGY13_09920	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EGY13_09940	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
EGY13_09955	COG2137	regulation of response to DNA damage stimulus
EGY13_09965	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
EGY13_09970	COG1011	Hydrolase
EGY13_09995	COG1522	sequence-specific DNA binding
EGY13_10005	COG1113	amino acid transport
EGY13_10020	COG0659	secondary active sulfate transmembrane transporter activity
EGY13_10025	COG2135	peptidase activity
EGY13_10040	COG3300	MHYT domain
EGY13_10040	COG5001	Diguanylate cyclase
EGY13_10060	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
EGY13_10060	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EGY13_10060	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EGY13_10065	COG1105	Belongs to the carbohydrate kinase PfkB family
EGY13_10070	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
EGY13_10070	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EGY13_10100	COG0024	Methionine aminopeptidase
EGY13_10105	COG0583	DNA-binding transcription factor activity
EGY13_10115	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
EGY13_10120	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
EGY13_10125	COG0516	GMP reductase activity
EGY13_10125	COG0517	IMP dehydrogenase activity
EGY13_10155	COG0552	protein localization to endoplasmic reticulum
EGY13_10165	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
EGY13_10175	COG4890	Cyd operon protein YbgT
EGY13_10180	COG1294	oxidase, subunit
EGY13_10195	COG1585	Membrane protein implicated in regulation of membrane protease activity
EGY13_10205	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
EGY13_10210	COG4774	siderophore transport
EGY13_10225	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
EGY13_10230	COG0569	domain protein
EGY13_10235	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
EGY13_10265	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
EGY13_10270	COG0542	response to heat
EGY13_10280	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
EGY13_10295	COG0446	pyridine nucleotide-disulphide oxidoreductase
EGY13_10295	COG1902	pentaerythritol trinitrate reductase activity
EGY13_10340	COG2323	membrane
EGY13_10345	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
EGY13_10355	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
EGY13_10360	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
EGY13_10365	COG0183	Belongs to the thiolase family
EGY13_10370	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
EGY13_10375	COG0596	Alpha beta hydrolase
EGY13_10380	COG2271	Major facilitator Superfamily
EGY13_10385	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
EGY13_10390	COG3485	protocatechuate 3,4-dioxygenase
EGY13_10395	COG3485	protocatechuate 3,4-dioxygenase
EGY13_10400	COG0710	3-dehydroquinate dehydratase activity
EGY13_10405	COG3420	alginic acid biosynthetic process
EGY13_10410	COG3659	wide pore channel activity
EGY13_10415	COG4993	Dehydrogenase
EGY13_10425	COG2391	methyltransferase activity
EGY13_10440	COG1414	Transcriptional regulator
EGY13_10445	COG0583	DNA-binding transcription factor activity
EGY13_10450	COG1960	acyl-CoA dehydrogenase activity
EGY13_10475	COG2814	Major facilitator Superfamily
EGY13_10485	COG0154	amidase activity
EGY13_10505	COG4638	Rieske (2fe-2S)
EGY13_10515	COG1028	Short-chain dehydrogenase reductase Sdr
EGY13_10525	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
EGY13_10535	COG3733	amine oxidase
EGY13_10545	COG1012	belongs to the aldehyde dehydrogenase family
EGY13_10555	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
EGY13_10560	COG0183	Belongs to the thiolase family
EGY13_10565	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
EGY13_10570	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
EGY13_10580	COG4829	muconolactone delta-isomerase
EGY13_10585	COG4948	Mandelate Racemase Muconate Lactonizing
EGY13_10590	COG0583	DNA-binding transcription factor activity
EGY13_10600	COG2186	Transcriptional regulator
EGY13_10620	COG1012	belongs to the aldehyde dehydrogenase family
EGY13_10635	COG1902	pentaerythritol trinitrate reductase activity
EGY13_10635	COG0446	pyridine nucleotide-disulphide oxidoreductase
EGY13_10675	COG1309	transcriptional regulator
EGY13_10685	COG1335	isochorismatase
EGY13_10690	COG0583	DNA-binding transcription factor activity
EGY13_10700	COG0475	glutathione-regulated potassium exporter activity
EGY13_10700	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
EGY13_10710	COG1473	amidohydrolase
EGY13_10750	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_10810	COG0583	DNA-binding transcription factor activity
EGY13_10835	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EGY13_10840	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
EGY13_10860	COG1566	PFAM secretion protein HlyD family protein
EGY13_10875	COG1012	belongs to the aldehyde dehydrogenase family
EGY13_10880	COG0129	dihydroxy-acid dehydratase activity
EGY13_10890	COG0583	DNA-binding transcription factor activity
EGY13_10895	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
EGY13_10905	COG2084	Dehydrogenase
EGY13_10910	COG2207	Transcriptional regulator
EGY13_10915	COG1064	alcohol dehydrogenase
EGY13_10925	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
EGY13_10930	COG1120	ATPase activity
EGY13_10950	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
EGY13_11015	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
EGY13_11115	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
EGY13_11130	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
EGY13_11145	COG2205	protein histidine kinase activity
EGY13_11150	COG0745	RESPONSE REGULATOR receiver
EGY13_11155	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EGY13_11160	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EGY13_11165	COG1538	Outer membrane efflux protein
EGY13_11175	COG2072	flavoprotein involved in K transport
EGY13_11195	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EGY13_11215	COG3539	Fimbrial protein
EGY13_11240	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
EGY13_11250	COG0753	catalase activity
EGY13_11260	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EGY13_11325	COG1535	isochorismatase
EGY13_11325	COG3433	isochorismatase activity
EGY13_11330	COG1028	Short-chain dehydrogenase reductase Sdr
EGY13_11335	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
EGY13_11340	COG4149	molybdate abc transporter
EGY13_11345	COG0725	ABC transporter, periplasmic molybdate-binding protein
EGY13_11355	COG4638	Rieske (2fe-2S)
EGY13_11360	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
EGY13_11365	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
EGY13_11365	COG0543	2 iron, 2 sulfur cluster binding
EGY13_11380	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
EGY13_11390	COG1028	Short-chain dehydrogenase reductase Sdr
EGY13_11395	COG0412	Dienelactone hydrolase
EGY13_11405	COG2207	Transcriptional regulator
EGY13_11410	COG1028	Short-chain dehydrogenase reductase Sdr
EGY13_11415	COG2610	gluconate transmembrane transporter activity
EGY13_11435	COG0583	DNA-binding transcription factor activity
EGY13_11450	COG2031	fatty acid transporter
EGY13_11455	COG0183	Belongs to the thiolase family
EGY13_11460	COG0583	DNA-binding transcription factor activity
EGY13_11465	COG0583	DNA-binding transcription factor activity
EGY13_11480	COG1027	Aspartate ammonia-lyase
EGY13_11490	COG0477	Major facilitator Superfamily
EGY13_11510	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
EGY13_11515	COG4521	taurine ABC transporter
EGY13_11540	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
EGY13_11545	COG1733	regulation of RNA biosynthetic process
EGY13_11550	COG2207	Transcriptional regulator
EGY13_11550	COG3708	Transcriptional regulator
EGY13_11565	COG0730	response to heat
EGY13_11575	COG3453	Protein conserved in bacteria
EGY13_11575	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EGY13_11585	COG3781	membrane
EGY13_11590	COG1063	alcohol dehydrogenase
EGY13_11600	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EGY13_11605	COG0508	dehydrogenase complex catalyzes the overall conversion of
EGY13_11610	COG0022	dehydrogenase e1 component
EGY13_11615	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
EGY13_11620	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
EGY13_11635	COG3706	GGDEF domain
EGY13_11650	COG0133	tryptophan synthase activity
EGY13_11660	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
EGY13_11695	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
EGY13_11720	COG2226	methyltransferase
EGY13_11775	COG0842	Transport permease protein
EGY13_11780	COG0842	Transport permease protein
EGY13_11785	COG1131	(ABC) transporter
EGY13_11800	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
EGY13_11805	COG4773	Receptor
EGY13_11825	COG0730	response to heat
EGY13_11830	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
EGY13_11845	COG0406	alpha-ribazole phosphatase activity
EGY13_11900	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
EGY13_11910	COG4264	IucA IucC family
EGY13_11915	COG4264	IucA IucC family
EGY13_11935	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
EGY13_11950	COG1960	acyl-CoA dehydrogenase activity
EGY13_11955	COG1960	acyl-CoA dehydrogenase activity
EGY13_11960	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EGY13_11965	COG2207	Transcriptional regulator
EGY13_11970	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
EGY13_11975	COG0776	regulation of translation
EGY13_12000	COG0822	iron-sulfur transferase activity
EGY13_12005	COG0316	Belongs to the HesB IscA family
EGY13_12035	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
EGY13_12055	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
EGY13_12060	COG0702	epimerase
EGY13_12095	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
EGY13_12105	COG0339	signal peptide processing
EGY13_12125	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
EGY13_12150	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
EGY13_12155	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
EGY13_12185	COG0776	regulation of translation
EGY13_12205	COG0590	tRNA wobble adenosine to inosine editing
EGY13_12235	COG2165	general secretion pathway protein
EGY13_12250	COG0084	hydrolase, TatD family'
EGY13_12270	COG1663	tetraacyldisaccharide 4'-kinase activity
EGY13_12275	COG1132	(ABC) transporter
EGY13_12285	COG0811	peptide transport
EGY13_12290	COG1475	DNA binding
EGY13_12295	COG1192	Involved in chromosome partitioning
EGY13_12305	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
EGY13_12320	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
EGY13_12325	COG0191	fructose-bisphosphate aldolase activity
EGY13_12345	COG0424	maF-like protein
EGY13_12350	COG2850	peptidyl-arginine hydroxylation
EGY13_12360	COG0640	Transcriptional regulator
EGY13_12385	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_12395	COG3122	Protein conserved in bacteria
EGY13_12400	COG1132	(ABC) transporter
EGY13_12420	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
EGY13_12425	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
EGY13_12435	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
EGY13_12435	COG0506	proline dehydrogenase activity
EGY13_12435	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
EGY13_12440	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
EGY13_12455	COG3698	Phosphodiester glycosidase
EGY13_12465	COG2353	YceI-like domain
EGY13_12475	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
EGY13_12520	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
EGY13_12520	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
EGY13_12545	COG3539	Fimbrial protein
EGY13_12550	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_12565	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_12600	COG0697	spore germination
EGY13_12610	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
EGY13_12620	COG0583	DNA-binding transcription factor activity
EGY13_12640	COG1309	transcriptional regulator
EGY13_12655	COG1522	sequence-specific DNA binding
EGY13_12665	COG1126	abc transporter atp-binding protein
EGY13_12670	COG0765	amino acid transport
EGY13_12675	COG0765	amino acid transport
EGY13_12705	COG1464	Belongs to the NlpA lipoprotein family
EGY13_12715	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
EGY13_12720	COG2011	ABC-type metal ion transport system permease component
EGY13_12725	COG0012	GTP binding
EGY13_12750	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
EGY13_12790	COG0386	Belongs to the glutathione peroxidase family
EGY13_12800	COG0436	Aminotransferase
EGY13_12805	COG1301	dicarboxylic acid transport
EGY13_12840	COG3634	alkyl hydroperoxide reductase activity
EGY13_12855	COG0583	DNA-binding transcription factor activity
EGY13_12860	COG0798	PFAM Bile acid sodium symporter
EGY13_12865	COG0640	Transcriptional regulator
EGY13_12880	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
EGY13_12890	COG0583	DNA-binding transcription factor activity
EGY13_12900	COG1953	Uracil, thiamine, allantoin
EGY13_12910	COG2175	clavaminate synthase activity
EGY13_12915	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
EGY13_12920	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
EGY13_12925	COG4521	taurine ABC transporter
EGY13_12935	COG0477	Major facilitator Superfamily
EGY13_12960	COG1271	oxidase subunit
EGY13_12965	COG1294	oxidase, subunit
EGY13_12975	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EGY13_12995	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
EGY13_13015	COG3052	prosthetic group binding
EGY13_13020	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
EGY13_13030	COG0583	DNA-binding transcription factor activity
EGY13_13040	COG2814	Major facilitator Superfamily
EGY13_13060	COG1346	cytolysis
EGY13_13070	COG0583	DNA-binding transcription factor activity
EGY13_13075	COG0625	glutathione transferase activity
EGY13_13080	COG0625	glutathione transferase activity
EGY13_13085	COG0583	DNA-binding transcription factor activity
EGY13_13100	COG1045	serine acetyltransferase
EGY13_13105	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
EGY13_13110	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
EGY13_13115	COG1280	lysine exporter protein (LysE YggA)
EGY13_13125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
EGY13_13130	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
EGY13_13135	COG1126	abc transporter atp-binding protein
EGY13_13140	COG0765	amino acid transport
EGY13_13145	COG0765	amino acid transport
EGY13_13165	COG2205	protein histidine kinase activity
EGY13_13165	COG0784	Response regulator, receiver
EGY13_13185	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
EGY13_13205	COG1028	Short-chain dehydrogenase reductase Sdr
EGY13_13250	COG0583	DNA-binding transcription factor activity
EGY13_13270	COG0318	PFAM AMP-dependent synthetase and ligase
EGY13_13275	COG1309	transcriptional regulator
EGY13_13280	COG1960	acyl-CoA dehydrogenase activity
EGY13_13285	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
EGY13_13290	COG1024	Enoyl-CoA hydratase
EGY13_13305	COG0583	DNA-binding transcription factor activity
EGY13_13320	COG1960	acyl-CoA dehydrogenase activity
EGY13_13330	COG2814	Major facilitator Superfamily
EGY13_13340	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
EGY13_13345	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
EGY13_13350	COG2814	Major facilitator Superfamily
EGY13_13355	COG1960	acyl-CoA dehydrogenase activity
EGY13_13360	COG1024	Enoyl-CoA hydratase
EGY13_13365	COG1028	Short-chain dehydrogenase reductase Sdr
EGY13_13370	COG1250	3-hydroxyacyl-CoA dehydrogenase
EGY13_13375	COG0183	Belongs to the thiolase family
EGY13_13385	COG2814	Major facilitator Superfamily
EGY13_13395	COG1024	Enoyl-CoA hydratase
EGY13_13410	COG1960	acyl-CoA dehydrogenase activity
EGY13_13415	COG2814	Major facilitator Superfamily
EGY13_13420	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
EGY13_13425	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
EGY13_13440	COG3842	ATPase activity
EGY13_13445	COG1840	ABC-type Fe3 transport system, periplasmic component
EGY13_13455	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
EGY13_13460	COG1414	Transcriptional regulator
EGY13_13470	COG0583	DNA-binding transcription factor activity
EGY13_13475	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
EGY13_13480	COG1012	belongs to the aldehyde dehydrogenase family
EGY13_13490	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
EGY13_13500	COG1012	belongs to the aldehyde dehydrogenase family
EGY13_13505	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
EGY13_13510	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
EGY13_13515	COG2267	carboxylic ester hydrolase activity
EGY13_13535	COG3038	cytochrome b561
EGY13_13540	COG0753	catalase activity
EGY13_13565	COG3344	reverse transcriptase
EGY13_13590	COG2050	protein possibly involved in aromatic compounds catabolism
EGY13_13600	COG3327	negative regulation of DNA-templated transcription, initiation
EGY13_13605	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
EGY13_13610	COG0183	Belongs to the thiolase family
EGY13_13615	COG1250	3-hydroxyacyl-CoA dehydrogenase
EGY13_13620	COG1024	Enoyl-CoA hydratase
EGY13_13625	COG1024	Enoyl-CoA hydratase
EGY13_13630	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
EGY13_13635	COG2151	metal-sulfur cluster biosynthetic enzyme
EGY13_13640	COG3396	Phenylacetate-CoA oxygenase
EGY13_13645	COG3460	Phenylacetate-CoA oxygenase
EGY13_13650	COG3396	Phenylacetate-CoA oxygenase
EGY13_13655	COG1012	belongs to the aldehyde dehydrogenase family
EGY13_13655	COG2030	dehydratase
EGY13_13660	COG1760	l-serine dehydratase
EGY13_13665	COG0531	amino acid
EGY13_13670	COG1012	belongs to the aldehyde dehydrogenase family
EGY13_13695	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
EGY13_13715	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EGY13_13730	COG0789	Transcriptional regulator
EGY13_13740	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
EGY13_13755	COG2807	transmembrane transport
EGY13_13760	COG0590	tRNA wobble adenosine to inosine editing
EGY13_13770	COG0583	DNA-binding transcription factor activity
EGY13_13810	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
EGY13_13810	COG2885	chlorophyll binding
EGY13_13880	COG1116	anion transmembrane transporter activity
EGY13_13885	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
EGY13_13895	COG0864	Transcriptional regulator
EGY13_13905	COG1733	regulation of RNA biosynthetic process
EGY13_13910	COG2249	NAD(P)H dehydrogenase (quinone) activity
EGY13_13915	COG0439	Biotin carboxylase
EGY13_13930	COG1063	alcohol dehydrogenase
EGY13_13960	COG0038	chloride channel
EGY13_13965	COG4770	biotin carboxylase activity
EGY13_13985	COG1914	H( )-stimulated, divalent metal cation uptake system
EGY13_13990	COG0583	DNA-binding transcription factor activity
EGY13_14010	COG3209	COG3209 Rhs family protein
EGY13_14025	COG3209	COG3209 Rhs family protein
EGY13_14030	COG3501	Rhs element vgr protein
EGY13_14060	COG1250	3-hydroxyacyl-CoA dehydrogenase
EGY13_14080	COG2814	Major facilitator Superfamily
EGY13_14095	COG1560	Kdo2-lipid A biosynthetic process
EGY13_14105	COG5006	permease, DMT superfamily
EGY13_14110	COG1522	sequence-specific DNA binding
EGY13_14125	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
EGY13_14165	COG1538	Outer membrane efflux protein
EGY13_14170	COG1137	ATPase activity
EGY13_14175	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
EGY13_14185	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
EGY13_14190	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
EGY13_14190	COG0517	IMP dehydrogenase activity
EGY13_14245	COG5434	Belongs to the glycosyl hydrolase 28 family
EGY13_14265	COG3566	protein conserved in bacteria
EGY13_14285	COG3567	Phage-associated protein, HI1409 family
EGY13_14290	COG5410	chromosome segregation
EGY13_14345	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_14370	COG1733	regulation of RNA biosynthetic process
EGY13_14375	COG2814	Major facilitator Superfamily
EGY13_14410	COG1278	Cold shock
EGY13_14415	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_14455	COG1570	exodeoxyribonuclease VII activity
EGY13_14510	COG0583	DNA-binding transcription factor activity
EGY13_14515	COG4638	Rieske (2fe-2S)
EGY13_14520	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
EGY13_14525	COG0633	Ferredoxin
EGY13_14525	COG0543	2 iron, 2 sulfur cluster binding
EGY13_14530	COG1028	Short-chain dehydrogenase reductase Sdr
EGY13_14535	COG3135	benzoate transporter
EGY13_14540	COG2814	Major facilitator Superfamily
EGY13_14555	COG1643	Atp-dependent helicase
EGY13_14560	COG0450	alkyl hydroperoxide reductase
EGY13_14570	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
EGY13_14580	COG3634	alkyl hydroperoxide reductase activity
EGY13_14600	COG0220	tRNA (guanine-N7-)-methyltransferase activity
EGY13_14605	COG0625	glutathione transferase activity
EGY13_14615	COG2885	chlorophyll binding
EGY13_14665	COG1765	OsmC-like protein
EGY13_14675	COG0667	Aldo Keto reductase
EGY13_14690	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
EGY13_14705	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
EGY13_14725	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
EGY13_14735	COG3038	cytochrome b561
EGY13_14740	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
EGY13_14745	COG2252	PERMEase
EGY13_14755	COG2072	flavoprotein involved in K transport
EGY13_14770	COG1741	Belongs to the pirin family
EGY13_14775	COG1309	transcriptional regulator
EGY13_14785	COG0300	oxidoreductase activity
EGY13_14790	COG2072	flavoprotein involved in K transport
EGY13_14795	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
EGY13_14840	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
EGY13_14855	COG2814	Major facilitator Superfamily
EGY13_14860	COG1024	Enoyl-CoA hydratase
EGY13_14865	COG1012	belongs to the aldehyde dehydrogenase family
EGY13_14875	COG1960	acyl-CoA dehydrogenase activity
EGY13_14900	COG2186	Transcriptional regulator
EGY13_14905	COG1012	belongs to the aldehyde dehydrogenase family
EGY13_14915	COG4948	Mandelate Racemase Muconate Lactonizing
EGY13_14920	COG2271	Major facilitator Superfamily
EGY13_14925	COG2721	sulfolactate sulfo-lyase activity
EGY13_14930	COG0697	spore germination
EGY13_14970	COG1113	amino acid transport
EGY13_14990	COG1012	belongs to the aldehyde dehydrogenase family
EGY13_15010	COG0531	amino acid
EGY13_15020	COG1113	amino acid transport
EGY13_15055	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_15070	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_15080	COG3501	Rhs element vgr protein
EGY13_15110	COG4251	negative regulation of phosphorylation
EGY13_15110	COG2203	Gaf domain
EGY13_15110	COG5001	Diguanylate cyclase
EGY13_15110	COG3706	GGDEF domain
EGY13_15120	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
EGY13_15180	COG4172	Belongs to the ABC transporter superfamily
EGY13_15185	COG4239	(ABC) transporter, permease
EGY13_15190	COG4174	ABC transporter (Permease)
EGY13_15200	COG0741	lytic transglycosylase activity
EGY13_15200	COG1388	LysM domain
EGY13_15200	COG1388	LysM domain
EGY13_15200	COG0741	lytic transglycosylase activity
EGY13_15205	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
EGY13_15245	COG0583	DNA-binding transcription factor activity
EGY13_15250	COG1279	arginine transmembrane transporter activity
EGY13_15270	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
EGY13_15275	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
EGY13_15280	COG0006	proline dipeptidase activity
EGY13_15320	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
EGY13_15345	COG3384	dioxygenase
EGY13_15355	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
EGY13_15360	COG2878	Part of a membrane complex involved in electron transport
EGY13_15365	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
EGY13_15390	COG0768	penicillin binding
EGY13_15395	COG0742	ribosomal rna small subunit methyltransferase
EGY13_15410	COG0830	nickel cation binding
EGY13_15420	COG0804	urea catabolic process
EGY13_15460	COG1253	flavin adenine dinucleotide binding
EGY13_15470	COG2851	Citrate transporter
EGY13_15520	COG1773	rubredoxin
EGY13_15525	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
EGY13_15535	COG0583	DNA-binding transcription factor activity
EGY13_15565	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
EGY13_15570	COG4181	ATPase activity
EGY13_15615	COG1262	PFAM Formylglycine-generating sulfatase enzyme
EGY13_15635	COG0306	phosphate transporter
EGY13_15650	COG3958	Transketolase
EGY13_15655	COG3959	Transketolase, thiamine diphosphate binding domain
EGY13_15660	COG2271	Major facilitator Superfamily
EGY13_15665	COG1028	Short-chain dehydrogenase reductase Sdr
EGY13_15670	COG0583	DNA-binding transcription factor activity
EGY13_15690	COG2223	nitrite transmembrane transporter activity
EGY13_15695	COG2207	Transcriptional regulator
EGY13_15700	COG2066	Belongs to the glutaminase family
EGY13_15705	COG0242	peptide deformylase activity
EGY13_15710	COG0477	Major facilitator Superfamily
EGY13_15720	COG0028	Belongs to the TPP enzyme family
EGY13_15735	COG1028	Short-chain dehydrogenase reductase Sdr
EGY13_15740	COG2267	carboxylic ester hydrolase activity
EGY13_15750	COG2271	Major facilitator Superfamily
EGY13_15755	COG0446	pyridine nucleotide-disulphide oxidoreductase
EGY13_15765	COG1028	Short-chain dehydrogenase reductase Sdr
EGY13_15785	COG1414	Transcriptional regulator
EGY13_15800	COG1024	Enoyl-CoA hydratase
EGY13_15810	COG1215	transferase activity, transferring glycosyl groups
EGY13_15815	COG0726	polysaccharide deacetylase
EGY13_15815	COG1649	PFAM Uncharacterised BCR, COG1649
EGY13_15825	COG4681	YaeQ
EGY13_15835	COG0523	cobalamin synthesis protein
EGY13_15845	COG1607	acyl-coa hydrolase
EGY13_15855	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
EGY13_15860	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
EGY13_15865	COG1309	transcriptional regulator
EGY13_15890	COG2040	homocysteine
EGY13_15895	COG0531	amino acid
EGY13_15920	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EGY13_15925	COG0477	Major facilitator Superfamily
EGY13_15955	COG1401	restriction endodeoxyribonuclease activity
EGY13_15970	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
EGY13_15980	COG0405	Gamma-glutamyltransferase
EGY13_15985	COG2814	Major facilitator Superfamily
EGY13_15995	COG2050	protein possibly involved in aromatic compounds catabolism
EGY13_16010	COG1090	epimerase
EGY13_16030	COG0420	3'-5' exonuclease activity
EGY13_16055	COG0735	belongs to the Fur family
EGY13_16060	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
EGY13_16085	COG0121	glutamine amidotransferase
EGY13_16100	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EGY13_16110	COG0210	DNA helicase
EGY13_16115	COG2885	chlorophyll binding
EGY13_16120	COG0204	Acyl-transferase
EGY13_16135	COG2894	cell division
EGY13_16150	COG1280	lysine exporter protein (LysE YggA)
EGY13_16155	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
EGY13_16155	COG1674	ftsk spoiiie
EGY13_16160	COG0492	ferredoxin-NADP+ reductase activity
EGY13_16165	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
EGY13_16175	COG0456	acetyltransferase
EGY13_16235	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
EGY13_16235	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
EGY13_16255	COG1012	belongs to the aldehyde dehydrogenase family
EGY13_16275	COG0473	3-isopropylmalate dehydrogenase activity
EGY13_16280	COG0583	DNA-binding transcription factor activity
EGY13_16300	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
EGY13_16325	COG0564	pseudouridine synthase activity
EGY13_16335	COG0358	DNA primase activity
EGY13_16350	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
EGY13_16380	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
EGY13_16410	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
EGY13_16420	COG0352	thiamine-phosphate diphosphorylase activity
EGY13_16420	COG0351	phosphomethylpyrimidine kinase
EGY13_16420	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
EGY13_16425	COG1652	LysM domain
EGY13_16450	COG1399	metal-binding, possibly nucleic acid-binding protein
EGY13_16455	COG3101	peptidyl-lysine hydroxylation
EGY13_16460	COG0009	L-threonylcarbamoyladenylate synthase
EGY13_16465	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
EGY13_16470	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
EGY13_16485	COG4106	trans-aconitate 2-methyltransferase activity
EGY13_16500	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
EGY13_16500	COG2226	methyltransferase
EGY13_16500	COG0596	Alpha beta hydrolase
EGY13_16505	COG1877	trehalose-phosphatase activity
EGY13_16510	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
EGY13_16515	COG2223	nitrite transmembrane transporter activity
EGY13_16535	COG1196	nuclear chromosome segregation
EGY13_16545	COG0730	response to heat
EGY13_16560	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
EGY13_16570	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
EGY13_16630	COG0489	protein tyrosine kinase activity
EGY13_16640	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EGY13_16640	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EGY13_16670	COG2515	1-aminocyclopropane-1-carboxylate deaminase
EGY13_16675	COG2081	HI0933 family
EGY13_16685	COG0668	transmembrane transport
EGY13_16705	COG0583	DNA-binding transcription factor activity
EGY13_16725	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EGY13_16730	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
EGY13_16760	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
EGY13_16795	COG2205	protein histidine kinase activity
EGY13_16800	COG0745	RESPONSE REGULATOR receiver
EGY13_16815	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EGY13_16840	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_16855	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_16870	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
EGY13_16875	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
EGY13_16885	COG0583	DNA-binding transcription factor activity
EGY13_16905	COG1473	amidohydrolase
EGY13_16915	COG0583	DNA-binding transcription factor activity
EGY13_16935	COG0583	DNA-binding transcription factor activity
EGY13_16940	COG1053	succinate dehydrogenase
EGY13_16950	COG1804	L-carnitine dehydratase bile acid-inducible protein F
EGY13_16955	COG2814	Major facilitator Superfamily
EGY13_16960	COG1960	acyl-CoA dehydrogenase activity
EGY13_16965	COG0583	DNA-binding transcription factor activity
EGY13_16970	COG1063	alcohol dehydrogenase
EGY13_17000	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
EGY13_17005	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
EGY13_17010	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
EGY13_17025	COG3667	copper resistance
EGY13_17030	COG2132	Multicopper oxidase
EGY13_17040	COG0561	phosphatase activity
EGY13_17045	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
EGY13_17055	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
EGY13_17070	COG1214	PFAM Peptidase M22, glycoprotease
EGY13_17120	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
EGY13_17130	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
EGY13_17135	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
EGY13_17140	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
EGY13_17200	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
EGY13_17210	COG1846	Transcriptional regulator
EGY13_17215	COG1764	response to oxidative stress
EGY13_17255	COG0037	tRNA processing
EGY13_17265	COG0248	Ppx GppA phosphatase
EGY13_17295	COG0072	phenylalanine-tRNA ligase activity
EGY13_17320	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
EGY13_17335	COG1238	metal cluster binding
EGY13_17340	COG0625	glutathione transferase activity
EGY13_17355	COG0318	PFAM AMP-dependent synthetase and ligase
EGY13_17360	COG3028	Belongs to the UPF0307 family
EGY13_17365	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
EGY13_17385	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
EGY13_17390	COG0617	tRNA 3'-terminal CCA addition
EGY13_17395	COG1555	photosystem II stabilization
EGY13_17400	COG3956	TIGRFAM MazG family protein
EGY13_17410	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EGY13_17430	COG0784	Response regulator, receiver
EGY13_17430	COG2205	protein histidine kinase activity
EGY13_17430	COG5002	protein histidine kinase activity
EGY13_17435	COG1024	Enoyl-CoA hydratase
EGY13_17440	COG2084	Dehydrogenase
EGY13_17445	COG3622	Belongs to the hyi family
EGY13_17460	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
EGY13_17465	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
EGY13_17470	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
EGY13_17475	COG0697	spore germination
EGY13_17485	COG2814	Major facilitator Superfamily
EGY13_17510	COG2072	flavoprotein involved in K transport
EGY13_17515	COG0492	ferredoxin-NADP+ reductase activity
EGY13_17520	COG0431	NADPH-dependent FMN reductase
EGY13_17525	COG0798	PFAM Bile acid sodium symporter
EGY13_17535	COG0640	Transcriptional regulator
EGY13_17570	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EGY13_17595	COG2132	Multicopper oxidase
EGY13_17610	COG2205	protein histidine kinase activity
EGY13_17690	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
EGY13_17700	COG0583	DNA-binding transcription factor activity
EGY13_17710	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
EGY13_17720	COG0084	hydrolase, TatD family'
EGY13_17735	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
EGY13_17770	COG0440	acetolactate synthase activity
EGY13_17775	COG0028	Belongs to the TPP enzyme family
EGY13_17800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EGY13_17805	COG1136	(ABC) transporter
EGY13_17805	COG0577	efflux transmembrane transporter activity
EGY13_17810	COG1538	Outer membrane efflux protein
EGY13_17825	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
EGY13_17830	COG1162	GTPase activity
EGY13_17840	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
EGY13_17880	COG1426	Protein conserved in bacteria
EGY13_17915	COG0793	Belongs to the peptidase S41A family
EGY13_17930	COG2267	carboxylic ester hydrolase activity
EGY13_17940	COG1012	belongs to the aldehyde dehydrogenase family
EGY13_17945	COG3265	gluconokinase activity
EGY13_17955	COG0800	Aldolase
EGY13_17965	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
EGY13_17970	COG0857	belongs to the CobB CobQ family
EGY13_17970	COG0280	phosphate acetyltransferase
EGY13_17975	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
EGY13_17975	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
EGY13_17995	COG0740	serine-type endopeptidase activity
EGY13_18005	COG4774	siderophore transport
EGY13_18015	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
EGY13_18025	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
EGY13_18025	COG2813	Specifically methylates the guanine in position
EGY13_18125	COG0788	formyltetrahydrofolate deformylase activity
EGY13_18140	COG0227	Belongs to the bacterial ribosomal protein bL28 family
EGY13_18145	COG0267	Belongs to the bacterial ribosomal protein bL33 family
EGY13_18150	COG4651	solute:proton antiporter activity
EGY13_18150	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
EGY13_18170	COG0724	RNA recognition motif
EGY13_18175	COG0210	DNA helicase
EGY13_18220	COG1280	lysine exporter protein (LysE YggA)
EGY13_18225	COG1560	Kdo2-lipid A biosynthetic process
EGY13_18235	COG1301	dicarboxylic acid transport
EGY13_18290	COG0473	3-isopropylmalate dehydrogenase activity
EGY13_18315	COG0583	DNA-binding transcription factor activity
EGY13_18350	COG2826	transposase and inactivated derivatives, IS30 family
EGY13_18360	COG0625	glutathione transferase activity
EGY13_18365	COG2378	regulation of single-species biofilm formation
EGY13_18370	COG0546	phosphoglycolate phosphatase activity
EGY13_18385	COG1530	ribonuclease E activity
EGY13_18405	COG0583	DNA-binding transcription factor activity
EGY13_18410	COG4221	oxidoreductase activity
EGY13_18415	COG0635	Involved in the biosynthesis of porphyrin-containing compound
EGY13_18425	COG0534	Mate efflux family protein
EGY13_18440	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
EGY13_18475	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
EGY13_18480	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EGY13_18495	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
EGY13_18505	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
EGY13_18505	COG0644	oxidoreductase
EGY13_18510	COG0425	Belongs to the sulfur carrier protein TusA family
EGY13_18515	COG4535	Mg2 and Co2 transporter CorC
EGY13_18525	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EGY13_18545	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
EGY13_18550	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
EGY13_18550	COG0475	glutathione-regulated potassium exporter activity
EGY13_18565	COG0484	heat shock protein binding
EGY13_18570	COG0789	Transcriptional regulator
EGY13_18575	COG0598	Magnesium transport protein CorA
EGY13_18595	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
EGY13_18600	COG1074	ATP-dependent DNA helicase activity
EGY13_18605	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
EGY13_18625	COG2226	methyltransferase
EGY13_18645	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
EGY13_18660	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
EGY13_18660	COG2111	Na H antiporter
EGY13_18665	COG1006	Multisubunit Na H antiporter MnhC subunit
EGY13_18670	COG0651	ATP synthesis coupled electron transport
EGY13_18680	COG2212	antiporter activity
EGY13_18700	COG0195	Participates in both transcription termination and antitermination
EGY13_18750	COG0237	dephospho-CoA kinase activity
EGY13_18760	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EGY13_18775	COG0497	DNA recombination
EGY13_18785	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
EGY13_18815	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
EGY13_18815	COG2169	Transcriptional regulator
EGY13_18820	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
EGY13_18885	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
EGY13_18900	COG0326	Molecular chaperone. Has ATPase activity
EGY13_18915	COG2056	Na+-H+ antiporter family
EGY13_18920	COG0596	Alpha beta hydrolase
EGY13_19015	COG0546	phosphoglycolate phosphatase activity
EGY13_19020	COG1716	ATPase activity
EGY13_19065	COG0181	hydroxymethylbilane synthase activity
EGY13_19075	COG3275	phosphorelay sensor kinase activity
EGY13_19095	COG1538	Outer membrane efflux protein
EGY13_19100	COG0697	spore germination
EGY13_19125	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
EGY13_19130	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
EGY13_19135	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
EGY13_19140	COG0772	Belongs to the SEDS family
EGY13_19165	COG4974	Belongs to the 'phage' integrase family
EGY13_19170	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
EGY13_19180	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
EGY13_19190	COG2197	response regulator
EGY13_19205	COG0793	Belongs to the peptidase S41A family
EGY13_19210	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
EGY13_19215	COG0795	lipopolysaccharide-transporting ATPase activity
EGY13_19255	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
EGY13_19255	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
EGY13_19265	COG0004	ammonium transporteR
EGY13_19270	COG0347	Belongs to the P(II) protein family
EGY13_19280	COG0606	chelatase, subunit chli
EGY13_19285	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EGY13_19295	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EGY13_19310	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
EGY13_19325	COG0318	PFAM AMP-dependent synthetase and ligase
EGY13_19335	COG0477	Major facilitator Superfamily
EGY13_19340	COG2860	membrane
EGY13_19350	COG1253	flavin adenine dinucleotide binding
EGY13_19360	COG0477	Major facilitator Superfamily
EGY13_19370	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
EGY13_19405	COG0655	NAD(P)H dehydrogenase (quinone) activity
EGY13_19415	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
EGY13_19450	COG1309	transcriptional regulator
EGY13_19460	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EGY13_19470	COG2801	Transposase and inactivated derivatives