locus-tag class description CQZ96_000010 PF01205 Uncharacterized protein family UPF0029 CQZ96_000025 PF01596 O-methyltransferase CQZ96_000030 PF00355 Rieske [2Fe-2S] domain CQZ96_000040 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_000045 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_000050 PF00005 ABC transporter CQZ96_000055 PF00375 Sodium:dicarboxylate symporter family CQZ96_000060 PF08496 Peptidase family S49 N-terminal CQZ96_000060 PF01343 Peptidase family S49 CQZ96_000065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_000065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_000065 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_000070 PF01965 DJ-1/PfpI family CQZ96_000075 PF00800 Prephenate dehydratase CQZ96_000075 PF01817 Chorismate mutase type II CQZ96_000075 PF01842 ACT domain CQZ96_000080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CQZ96_000100 PF01137 RNA 3'-terminal phosphate cyclase CQZ96_000100 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain CQZ96_000125 PF01139 tRNA-splicing ligase RtcB CQZ96_000140 PF00753 Metallo-beta-lactamase superfamily CQZ96_000145 PF00158 Sigma-54 interaction domain CQZ96_000145 PF06956 Regulator of RNA terminal phosphate cyclase CQZ96_000155 PF03883 Peroxide stress protein YaaA CQZ96_000200 PF00132 Bacterial transferase hexapeptide (six repeats) CQZ96_000205 PF00588 SpoU rRNA Methylase family CQZ96_000210 PF01336 OB-fold nucleic acid binding domain CQZ96_000210 PF02811 PHP domain CQZ96_000210 PF07733 Bacterial DNA polymerase III alpha NTPase domain CQZ96_000210 PF14579 Helix-hairpin-helix motif CQZ96_000210 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CQZ96_000250 PF12146 Serine aminopeptidase, S33 CQZ96_000255 PF00753 Metallo-beta-lactamase superfamily CQZ96_000255 PF16123 Hydroxyacylglutathione hydrolase C-terminus CQZ96_000265 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_000270 PF09383 NIL domain CQZ96_000270 PF00005 ABC transporter CQZ96_000275 PF03180 NLPA lipoprotein CQZ96_000285 PF02843 Phosphoribosylglycinamide synthetase, C domain CQZ96_000285 PF02844 Phosphoribosylglycinamide synthetase, N domain CQZ96_000285 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CQZ96_000290 PF01808 AICARFT/IMPCHase bienzyme CQZ96_000290 PF02142 MGS-like domain CQZ96_000295 PF02954 Bacterial regulatory protein, Fis family CQZ96_000320 PF13932 GidA associated domain CQZ96_000320 PF01134 Glucose inhibited division protein A CQZ96_000325 PF03747 ADP-ribosylglycohydrolase CQZ96_000340 PF14403 Circularly permuted ATP-grasp type 2 CQZ96_000350 PF01841 Transglutaminase-like superfamily CQZ96_000350 PF08379 Bacterial transglutaminase-like N-terminal region CQZ96_000365 PF01168 Alanine racemase, N-terminal domain CQZ96_000365 PF00842 Alanine racemase, C-terminal domain CQZ96_000375 PF00772 DnaB-like helicase N terminal domain CQZ96_000375 PF03796 DnaB-like helicase C terminal domain CQZ96_000380 PF03948 Ribosomal protein L9, C-terminal domain CQZ96_000380 PF01281 Ribosomal protein L9, N-terminal domain CQZ96_000385 PF01084 Ribosomal protein S18 CQZ96_000390 PF01250 Ribosomal protein S6 CQZ96_000410 PF01040 UbiA prenyltransferase family CQZ96_000415 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CQZ96_000420 PF00510 Cytochrome c oxidase subunit III CQZ96_000425 PF00115 Cytochrome C and Quinol oxidase polypeptide I CQZ96_000430 PF06481 COX Aromatic Rich Motif CQZ96_000430 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CQZ96_000440 PF00391 PEP-utilising enzyme, mobile domain CQZ96_000440 PF02896 PEP-utilising enzyme, TIM barrel domain CQZ96_000440 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CQZ96_000445 PF03618 Kinase/pyrophosphorylase CQZ96_000465 PF05360 yiaA/B two helix domain CQZ96_000470 PF00296 Luciferase-like monooxygenase CQZ96_000485 PF03462 PCRF domain CQZ96_000485 PF00472 RF-1 domain CQZ96_000490 PF13847 Methyltransferase domain CQZ96_000490 PF17827 PrmC N-terminal domain CQZ96_000495 PF01062 Bestrophin, RFP-TM, chloride channel CQZ96_000500 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_000505 PF09084 NMT1/THI5 like CQZ96_000520 PF00106 short chain dehydrogenase CQZ96_000525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_000525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_000525 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_000530 PF00501 AMP-binding enzyme CQZ96_000530 PF13193 AMP-binding enzyme C-terminal domain CQZ96_000540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_000540 PF07730 Histidine kinase CQZ96_000545 PF00196 Bacterial regulatory proteins, luxR family CQZ96_000545 PF00072 Response regulator receiver domain CQZ96_000550 PF00916 Sulfate permease family CQZ96_000550 PF01740 STAS domain CQZ96_000555 PF00043 Glutathione S-transferase, C-terminal domain CQZ96_000555 PF02798 Glutathione S-transferase, N-terminal domain CQZ96_000560 PF02525 Flavodoxin-like fold CQZ96_000565 PF03992 Antibiotic biosynthesis monooxygenase CQZ96_000595 PF05690 Thiazole biosynthesis protein ThiG CQZ96_000605 PF04241 Protein of unknown function (DUF423) CQZ96_000610 PF00140 Sigma-70 factor, region 1.2 CQZ96_000610 PF04542 Sigma-70 region 2 CQZ96_000610 PF04545 Sigma-70, region 4 CQZ96_000620 PF00313 'Cold-shock' DNA-binding domain CQZ96_000625 PF00270 DEAD/DEAH box helicase CQZ96_000625 PF00271 Helicase conserved C-terminal domain CQZ96_000635 PF00881 Nitroreductase family CQZ96_000640 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CQZ96_000640 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CQZ96_000660 PF01180 Dihydroorotate dehydrogenase CQZ96_000665 PF02674 Colicin V production protein CQZ96_000670 PF00156 Phosphoribosyl transferase domain CQZ96_000680 PF06968 Biotin and Thiamin Synthesis associated domain CQZ96_000680 PF04055 Radical SAM superfamily CQZ96_000685 PF08331 Domain of unknown function (DUF1730) CQZ96_000690 PF03853 YjeF-related protein N-terminus CQZ96_000690 PF01256 Carbohydrate kinase CQZ96_000695 PF00708 Acylphosphatase CQZ96_000710 PF02075 Crossover junction endodeoxyribonuclease RuvC CQZ96_000720 PF01810 LysE type translocator CQZ96_000735 PF02772 S-adenosylmethionine synthetase, central domain CQZ96_000735 PF02773 S-adenosylmethionine synthetase, C-terminal domain CQZ96_000735 PF00438 S-adenosylmethionine synthetase, N-terminal domain CQZ96_000740 PF02779 Transketolase, pyrimidine binding domain CQZ96_000740 PF02780 Transketolase, C-terminal domain CQZ96_000740 PF00456 Transketolase, thiamine diphosphate binding domain CQZ96_000775 PF04264 YceI-like domain CQZ96_000795 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CQZ96_000795 PF12833 Helix-turn-helix domain CQZ96_000800 PF13411 MerR HTH family regulatory protein CQZ96_000800 PF06445 GyrI-like small molecule binding domain CQZ96_000805 PF07690 Major Facilitator Superfamily CQZ96_000825 PF03891 Domain of unknown function (DUF333) CQZ96_000830 PF00117 Glutamine amidotransferase class-I CQZ96_000830 PF02540 NAD synthase CQZ96_000830 PF00958 GMP synthase C terminal domain CQZ96_000835 PF00440 Bacterial regulatory proteins, tetR family CQZ96_000840 PF00106 short chain dehydrogenase CQZ96_000845 PF01323 DSBA-like thioredoxin domain CQZ96_000855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_000855 PF03466 LysR substrate binding domain CQZ96_000870 PF00171 Aldehyde dehydrogenase family CQZ96_000875 PF02954 Bacterial regulatory protein, Fis family CQZ96_000885 PF00106 short chain dehydrogenase CQZ96_000890 PF00465 Iron-containing alcohol dehydrogenase CQZ96_000900 PF02803 Thiolase, C-terminal domain CQZ96_000900 PF00108 Thiolase, N-terminal domain CQZ96_000925 PF07690 Major Facilitator Superfamily CQZ96_000930 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CQZ96_000930 PF12169 DNA polymerase III subunits gamma and tau domain III CQZ96_000930 PF12170 DNA polymerase III tau subunit V interacting with alpha CQZ96_000940 PF00689 Cation transporting ATPase, C-terminus CQZ96_000940 PF00690 Cation transporter/ATPase, N-terminus CQZ96_000945 PF02308 MgtC family CQZ96_000950 PF03061 Thioesterase superfamily CQZ96_000960 PF00465 Iron-containing alcohol dehydrogenase CQZ96_000965 PF01451 Low molecular weight phosphotyrosine protein phosphatase CQZ96_000970 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CQZ96_000970 PF01565 FAD binding domain CQZ96_001030 PF01230 HIT domain CQZ96_001040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CQZ96_001040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CQZ96_001050 PF01053 Cys/Met metabolism PLP-dependent enzyme CQZ96_001055 PF02575 YbaB/EbfC DNA-binding family CQZ96_001060 PF02132 RecR protein CQZ96_001060 PF13662 Toprim domain CQZ96_001065 PF01612 3'-5' exonuclease CQZ96_001065 PF00570 HRDC domain CQZ96_001070 PF05166 YcgL domain CQZ96_001080 PF00004 ATPase family associated with various cellular activities (AAA) CQZ96_001080 PF01434 Peptidase family M41 CQZ96_001080 PF17862 AAA+ lid domain CQZ96_001090 PF00291 Pyridoxal-phosphate dependent enzyme CQZ96_001095 PF01380 SIS domain CQZ96_001095 PF00571 CBS domain CQZ96_001125 PF05193 Peptidase M16 inactive domain CQZ96_001125 PF00675 Insulinase (Peptidase family M16) CQZ96_001130 PF00448 SRP54-type protein, GTPase domain CQZ96_001130 PF02881 SRP54-type protein, helical bundle domain CQZ96_001140 PF01274 Malate synthase CQZ96_001160 PF03741 Integral membrane protein TerC family CQZ96_001160 PF03471 Transporter associated domain CQZ96_001180 PF05525 Branched-chain amino acid transport protein CQZ96_001185 PF00557 Metallopeptidase family M24 CQZ96_001190 PF03594 Benzoate membrane transport protein CQZ96_001195 PF01810 LysE type translocator CQZ96_001200 PF00923 Transaldolase/Fructose-6-phosphate aldolase CQZ96_001205 PF03466 LysR substrate binding domain CQZ96_001205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_001220 PF14493 Helix-turn-helix domain CQZ96_001220 PF05970 PIF1-like helicase CQZ96_001230 PF01740 STAS domain CQZ96_001230 PF00916 Sulfate permease family CQZ96_001245 PF02110 Hydroxyethylthiazole kinase family CQZ96_001290 PF08173 Membrane bound YbgT-like protein CQZ96_001295 PF02322 Cytochrome bd terminal oxidase subunit II CQZ96_001300 PF01654 Cytochrome bd terminal oxidase subunit I CQZ96_001310 PF02525 Flavodoxin-like fold CQZ96_001325 PF00294 pfkB family carbohydrate kinase CQZ96_001335 PF05193 Peptidase M16 inactive domain CQZ96_001335 PF08367 Peptidase M16C associated CQZ96_001335 PF00675 Insulinase (Peptidase family M16) CQZ96_001340 PF02253 Phospholipase A1 CQZ96_001345 PF00005 ABC transporter CQZ96_001345 PF00664 ABC transporter transmembrane region CQZ96_001350 PF05973 Phage derived protein Gp49-like (DUF891) CQZ96_001375 PF07715 TonB-dependent Receptor Plug Domain CQZ96_001375 PF00593 TonB dependent receptor CQZ96_001380 PF02684 Lipid-A-disaccharide synthetase CQZ96_001400 PF06078 Bacterial protein of unknown function (DUF937) CQZ96_001410 PF00158 Sigma-54 interaction domain CQZ96_001410 PF02954 Bacterial regulatory protein, Fis family CQZ96_001410 PF00072 Response regulator receiver domain CQZ96_001415 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_001415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_001415 PF00989 PAS fold CQZ96_001420 PF04055 Radical SAM superfamily CQZ96_001420 PF00919 Uncharacterized protein family UPF0004 CQZ96_001420 PF18693 TRAM domain CQZ96_001425 PF00696 Amino acid kinase family CQZ96_001430 PF01765 Ribosome recycling factor CQZ96_001435 PF01255 Putative undecaprenyl diphosphate synthase CQZ96_001445 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CQZ96_001445 PF13288 DXP reductoisomerase C-terminal domain CQZ96_001445 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CQZ96_001450 PF17820 PDZ domain CQZ96_001450 PF02163 Peptidase family M50 CQZ96_001450 PF13180 PDZ domain CQZ96_001455 PF07244 Surface antigen variable number repeat CQZ96_001455 PF01103 Surface antigen CQZ96_001465 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CQZ96_001465 PF00132 Bacterial transferase hexapeptide (six repeats) CQZ96_001470 PF07977 FabA-like domain CQZ96_001475 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CQZ96_001475 PF00132 Bacterial transferase hexapeptide (six repeats) CQZ96_001490 PF02631 RecX family CQZ96_001495 PF13193 AMP-binding enzyme C-terminal domain CQZ96_001495 PF00501 AMP-binding enzyme CQZ96_001500 PF00106 short chain dehydrogenase CQZ96_001505 PF00154 recA bacterial DNA recombination protein CQZ96_001510 PF01479 S4 domain CQZ96_001515 PF13419 Haloacid dehalogenase-like hydrolase CQZ96_001530 PF00459 Inositol monophosphatase family CQZ96_001540 PF00041 Fibronectin type III domain CQZ96_001540 PF12561 ToxR activated gene A lipoprotein domain CQZ96_001550 PF00793 DAHP synthetase I family CQZ96_001555 PF01925 Sulfite exporter TauE/SafE CQZ96_001575 PF00667 FAD binding domain CQZ96_001575 PF00175 Oxidoreductase NAD-binding domain CQZ96_001575 PF00258 Flavodoxin CQZ96_001580 PF01425 Amidase CQZ96_001585 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_001585 PF07694 5TMR of 5TMR-LYT CQZ96_001595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQZ96_001595 PF00289 Biotin carboxylase, N-terminal domain CQZ96_001595 PF02785 Biotin carboxylase C-terminal domain CQZ96_001600 PF00364 Biotin-requiring enzyme CQZ96_001605 PF01220 Dehydroquinase class II CQZ96_001610 PF11798 IMS family HHH motif CQZ96_001610 PF11799 impB/mucB/samB family C-terminal domain CQZ96_001610 PF00817 impB/mucB/samB family CQZ96_001610 PF13438 Domain of unknown function (DUF4113) CQZ96_001625 PF00717 Peptidase S24-like CQZ96_001640 PF01047 MarR family CQZ96_001645 PF13098 Thioredoxin-like domain CQZ96_001650 PF08534 Redoxin CQZ96_001655 PF11412 Disulphide bond corrector protein DsbC CQZ96_001655 PF02683 Cytochrome C biogenesis protein transmembrane region CQZ96_001670 PF01433 Peptidase family M1 domain CQZ96_001670 PF11940 Domain of unknown function (DUF3458) Ig-like fold CQZ96_001670 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CQZ96_001685 PF13742 OB-fold nucleic acid binding domain CQZ96_001685 PF02601 Exonuclease VII, large subunit CQZ96_001745 PF00135 Carboxylesterase family CQZ96_001755 PF00893 Small Multidrug Resistance protein CQZ96_001765 PF14850 DNA-binding domain of Proline dehydrogenase CQZ96_001765 PF01619 Proline dehydrogenase CQZ96_001765 PF00171 Aldehyde dehydrogenase family CQZ96_001765 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CQZ96_001770 PF01037 Lrp/AsnC ligand binding domain CQZ96_001775 PF00474 Sodium:solute symporter family CQZ96_001780 PF10415 Fumarase C C-terminus CQZ96_001780 PF00206 Lyase CQZ96_001790 PF02146 Sir2 family CQZ96_001810 PF00083 Sugar (and other) transporter CQZ96_001820 PF03594 Benzoate membrane transport protein CQZ96_001825 PF00106 short chain dehydrogenase CQZ96_001830 PF00970 Oxidoreductase FAD-binding domain CQZ96_001830 PF00111 2Fe-2S iron-sulfur cluster binding domain CQZ96_001830 PF00175 Oxidoreductase NAD-binding domain CQZ96_001835 PF00866 Ring hydroxylating beta subunit CQZ96_001840 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CQZ96_001840 PF00355 Rieske [2Fe-2S] domain CQZ96_001845 PF00775 Dioxygenase CQZ96_001845 PF04444 Catechol dioxygenase N terminus CQZ96_001850 PF03466 LysR substrate binding domain CQZ96_001850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_001855 PF07690 Major Facilitator Superfamily CQZ96_001865 PF12697 Alpha/beta hydrolase family CQZ96_001875 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_001875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CQZ96_001890 PF03466 LysR substrate binding domain CQZ96_001890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_001895 PF10415 Fumarase C C-terminus CQZ96_001895 PF00206 Lyase CQZ96_001905 PF06418 CTP synthase N-terminus CQZ96_001905 PF00117 Glutamine amidotransferase class-I CQZ96_001910 PF00793 DAHP synthetase I family CQZ96_001915 PF00113 Enolase, C-terminal TIM barrel domain CQZ96_001915 PF03952 Enolase, N-terminal domain CQZ96_001920 PF04977 Septum formation initiator CQZ96_001925 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CQZ96_001930 PF01098 Cell cycle protein CQZ96_001935 PF01266 FAD dependent oxidoreductase CQZ96_001950 PF01266 FAD dependent oxidoreductase CQZ96_001960 PF00881 Nitroreductase family CQZ96_001965 PF00149 Calcineurin-like phosphoesterase CQZ96_001970 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CQZ96_001975 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CQZ96_001975 PF00749 tRNA synthetases class I (E and Q), catalytic domain CQZ96_001980 PF06865 Pyrimidine/purine nucleoside phosphorylase CQZ96_001985 PF03466 LysR substrate binding domain CQZ96_001985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_001990 PF00248 Aldo/keto reductase family CQZ96_002020 PF17925 Tetracyclin repressor-like, C-terminal domain CQZ96_002020 PF00440 Bacterial regulatory proteins, tetR family CQZ96_002025 PF12697 Alpha/beta hydrolase family CQZ96_002025 PF08241 Methyltransferase domain CQZ96_002030 PF01553 Acyltransferase CQZ96_002035 PF00291 Pyridoxal-phosphate dependent enzyme CQZ96_002065 PF00782 Dual specificity phosphatase, catalytic domain CQZ96_002070 PF12147 Putative methyltransferase CQZ96_002070 PF12146 Serine aminopeptidase, S33 CQZ96_002075 PF01066 CDP-alcohol phosphatidyltransferase CQZ96_002080 PF04073 Aminoacyl-tRNA editing domain CQZ96_002085 PF01638 HxlR-like helix-turn-helix CQZ96_002095 PF01636 Phosphotransferase enzyme family CQZ96_002105 PF00230 Major intrinsic protein CQZ96_002110 PF01593 Flavin containing amine oxidoreductase CQZ96_002115 PF01169 Uncharacterized protein family UPF0016 CQZ96_002120 PF00884 Sulfatase CQZ96_002125 PF04183 IucA / IucC family CQZ96_002125 PF06276 Ferric iron reductase FhuF-like transporter CQZ96_002130 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CQZ96_002135 PF04183 IucA / IucC family CQZ96_002135 PF06276 Ferric iron reductase FhuF-like transporter CQZ96_002150 PF07690 Major Facilitator Superfamily CQZ96_002155 PF00593 TonB dependent receptor CQZ96_002155 PF07715 TonB-dependent Receptor Plug Domain CQZ96_002170 PF13419 Haloacid dehalogenase-like hydrolase CQZ96_002180 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CQZ96_002185 PF02277 Phosphoribosyltransferase CQZ96_002190 PF00300 Histidine phosphatase superfamily (branch 1) CQZ96_002195 PF02654 Cobalamin-5-phosphate synthase CQZ96_002205 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CQZ96_002215 PF00375 Sodium:dicarboxylate symporter family CQZ96_002220 PF01740 STAS domain CQZ96_002220 PF00916 Sulfate permease family CQZ96_002240 PF04143 Sulphur transport CQZ96_002250 PF00753 Metallo-beta-lactamase superfamily CQZ96_002255 PF00563 EAL domain CQZ96_002255 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_002255 PF03707 Bacterial signalling protein N terminal repeat CQZ96_002260 PF00793 DAHP synthetase I family CQZ96_002315 PF01597 Glycine cleavage H-protein CQZ96_002320 PF12833 Helix-turn-helix domain CQZ96_002320 PF02311 AraC-like ligand binding domain CQZ96_002330 PF00583 Acetyltransferase (GNAT) family CQZ96_002335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_002335 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_002335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_002340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_002340 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_002340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_002345 PF03109 ABC1 family CQZ96_002360 PF05175 Methyltransferase small domain CQZ96_002365 PF01264 Chorismate synthase CQZ96_002390 PF00582 Universal stress protein family CQZ96_002395 PF05194 UreE urease accessory protein, C-terminal domain CQZ96_002395 PF02814 UreE urease accessory protein, N-terminal domain CQZ96_002400 PF01730 UreF CQZ96_002405 PF02492 CobW/HypB/UreG, nucleotide-binding domain CQZ96_002415 PF01774 UreD urease accessory protein CQZ96_002420 PF00547 Urease, gamma subunit CQZ96_002425 PF00699 Urease beta subunit CQZ96_002430 PF01979 Amidohydrolase family CQZ96_002430 PF00449 Urease alpha-subunit, N-terminal domain CQZ96_002465 PF00576 HIUase/Transthyretin family CQZ96_002475 PF04115 Ureidoglycolate lyase CQZ96_002480 PF03561 Allantoicase repeat CQZ96_002485 PF01494 FAD binding domain CQZ96_002490 PF03466 LysR substrate binding domain CQZ96_002490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_002495 PF00355 Rieske [2Fe-2S] domain CQZ96_002500 PF00171 Aldehyde dehydrogenase family CQZ96_002505 PF07687 Peptidase dimerisation domain CQZ96_002505 PF01546 Peptidase family M20/M25/M40 CQZ96_002520 PF01042 Endoribonuclease L-PSP CQZ96_002535 PF00202 Aminotransferase class-III CQZ96_002540 PF00892 EamA-like transporter family CQZ96_002545 PF00092 von Willebrand factor type A domain CQZ96_002550 PF02342 TerD domain CQZ96_002580 PF15608 PELOTA RNA binding domain CQZ96_002580 PF11202 Phosphoribosyl transferase (PRTase) CQZ96_002600 PF02342 TerD domain CQZ96_002605 PF02342 TerD domain CQZ96_002615 PF02342 TerD domain CQZ96_002620 PF10138 vWA found in TerF C terminus CQZ96_002630 PF02342 TerD domain CQZ96_002635 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CQZ96_002635 PF18381 YcaO cyclodehydratase C-terminal domain CQZ96_002640 PF03466 LysR substrate binding domain CQZ96_002640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_002645 PF00171 Aldehyde dehydrogenase family CQZ96_002650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CQZ96_002650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CQZ96_002655 PF13193 AMP-binding enzyme C-terminal domain CQZ96_002655 PF00501 AMP-binding enzyme CQZ96_002660 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_002660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_002660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_002665 PF00378 Enoyl-CoA hydratase/isomerase CQZ96_002675 PF07859 alpha/beta hydrolase fold CQZ96_002680 PF00561 alpha/beta hydrolase fold CQZ96_002690 PF00440 Bacterial regulatory proteins, tetR family CQZ96_002695 PF01047 MarR family CQZ96_002715 PF03781 Sulfatase-modifying factor enzyme 1 CQZ96_002720 PF00884 Sulfatase CQZ96_002730 PF01494 FAD binding domain CQZ96_002735 PF07690 Major Facilitator Superfamily CQZ96_002740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_002740 PF03466 LysR substrate binding domain CQZ96_002745 PF13404 AsnC-type helix-turn-helix domain CQZ96_002745 PF01037 Lrp/AsnC ligand binding domain CQZ96_002750 PF00072 Response regulator receiver domain CQZ96_002750 PF00196 Bacterial regulatory proteins, luxR family CQZ96_002760 PF00301 Rubredoxin CQZ96_002775 PF02803 Thiolase, C-terminal domain CQZ96_002775 PF00108 Thiolase, N-terminal domain CQZ96_002780 PF00171 Aldehyde dehydrogenase family CQZ96_002785 PF00107 Zinc-binding dehydrogenase CQZ96_002785 PF08240 Alcohol dehydrogenase GroES-like domain CQZ96_002790 PF00501 AMP-binding enzyme CQZ96_002790 PF13193 AMP-binding enzyme C-terminal domain CQZ96_002795 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_002795 PF14759 Reductase C-terminal CQZ96_002800 PF00196 Bacterial regulatory proteins, luxR family CQZ96_002800 PF00072 Response regulator receiver domain CQZ96_002810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_002810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_002810 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_002815 PF00378 Enoyl-CoA hydratase/isomerase CQZ96_002820 PF01053 Cys/Met metabolism PLP-dependent enzyme CQZ96_002825 PF07715 TonB-dependent Receptor Plug Domain CQZ96_002825 PF07660 Secretin and TonB N terminus short domain CQZ96_002825 PF00593 TonB dependent receptor CQZ96_002830 PF03466 LysR substrate binding domain CQZ96_002830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_002845 PF00529 HlyD membrane-fusion protein of T1SS CQZ96_002845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQZ96_002850 PF00873 AcrB/AcrD/AcrF family CQZ96_002860 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_002870 PF12706 Beta-lactamase superfamily domain CQZ96_002875 PF08359 YsiA-like protein, C-terminal region CQZ96_002875 PF00440 Bacterial regulatory proteins, tetR family CQZ96_002885 PF03466 LysR substrate binding domain CQZ96_002885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_002890 PF03788 LrgA family CQZ96_002895 PF04172 LrgB-like family CQZ96_002900 PF12832 MFS_1 like family CQZ96_002920 PF03594 Benzoate membrane transport protein CQZ96_002925 PF00561 alpha/beta hydrolase fold CQZ96_002930 PF00155 Aminotransferase class I and II CQZ96_002935 PF00005 ABC transporter CQZ96_002935 PF12848 ABC transporter CQZ96_002960 PF08240 Alcohol dehydrogenase GroES-like domain CQZ96_002960 PF00107 Zinc-binding dehydrogenase CQZ96_002965 PF13091 PLD-like domain CQZ96_002975 PF00155 Aminotransferase class I and II CQZ96_002980 PF00892 EamA-like transporter family CQZ96_003000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_003000 PF03466 LysR substrate binding domain CQZ96_003010 PF07690 Major Facilitator Superfamily CQZ96_003040 PF00106 short chain dehydrogenase CQZ96_003055 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_003055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_003055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_003060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_003060 PF03466 LysR substrate binding domain CQZ96_003080 PF02322 Cytochrome bd terminal oxidase subunit II CQZ96_003085 PF01654 Cytochrome bd terminal oxidase subunit I CQZ96_003140 PF10415 Fumarase C C-terminus CQZ96_003140 PF00206 Lyase CQZ96_003145 PF01370 NAD dependent epimerase/dehydratase family CQZ96_003155 PF03616 Sodium/glutamate symporter CQZ96_003160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_003160 PF03466 LysR substrate binding domain CQZ96_003165 PF13460 NAD(P)H-binding CQZ96_003300 PF00145 C-5 cytosine-specific DNA methylase CQZ96_003340 PF00589 Phage integrase family CQZ96_003345 PF02635 DsrE/DsrF-like family CQZ96_003370 PF01638 HxlR-like helix-turn-helix CQZ96_003375 PF00487 Fatty acid desaturase CQZ96_003380 PF12833 Helix-turn-helix domain CQZ96_003380 PF12852 Cupin CQZ96_003385 PF09312 SurA N-terminal domain CQZ96_003385 PF00639 PPIC-type PPIASE domain CQZ96_003390 PF00216 Bacterial DNA-binding protein CQZ96_003405 PF02082 Transcriptional regulator CQZ96_003410 PF00266 Aminotransferase class-V CQZ96_003415 PF01592 NifU-like N terminal domain CQZ96_003420 PF01521 Iron-sulphur cluster biosynthesis CQZ96_003425 PF07743 HSCB C-terminal oligomerisation domain CQZ96_003425 PF00226 DnaJ domain CQZ96_003430 PF00012 Hsp70 protein CQZ96_003435 PF00111 2Fe-2S iron-sulfur cluster binding domain CQZ96_003440 PF00211 Adenylate and Guanylate cyclase catalytic domain CQZ96_003450 PF02559 CarD-like/TRCF domain CQZ96_003450 PF00270 DEAD/DEAH box helicase CQZ96_003450 PF17757 UvrB interaction domain CQZ96_003450 PF03461 TRCF domain CQZ96_003450 PF00271 Helicase conserved C-terminal domain CQZ96_003475 PF03737 Aldolase/RraA CQZ96_003480 PF13460 NAD(P)H-binding CQZ96_003485 PF01649 Ribosomal protein S20 CQZ96_003490 PF02542 YgbB family CQZ96_003520 PF03691 Uncharacterised protein family (UPF0167) CQZ96_003540 PF01116 Fructose-bisphosphate aldolase class-II CQZ96_003550 PF00162 Phosphoglycerate kinase CQZ96_003560 PF02545 Maf-like protein CQZ96_003570 PF08007 Cupin superfamily protein CQZ96_003585 PF01645 Conserved region in glutamate synthase CQZ96_003600 PF00285 Citrate synthase, C-terminal domain CQZ96_003610 PF00440 Bacterial regulatory proteins, tetR family CQZ96_003615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CQZ96_003615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CQZ96_003625 PF17941 Polyphosphate kinase C-terminal domain 1 CQZ96_003625 PF13090 Polyphosphate kinase C-terminal domain 2 CQZ96_003625 PF13089 Polyphosphate kinase N-terminal domain CQZ96_003625 PF02503 Polyphosphate kinase middle domain CQZ96_003630 PF02515 CoA-transferase family III CQZ96_003635 PF07690 Major Facilitator Superfamily CQZ96_003640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_003640 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_003640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_003645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_003645 PF03466 LysR substrate binding domain CQZ96_003655 PF13291 ACT domain CQZ96_003655 PF04607 Region found in RelA / SpoT proteins CQZ96_003655 PF02824 TGS domain CQZ96_003660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_003660 PF03466 LysR substrate binding domain CQZ96_003665 PF05958 tRNA (Uracil-5-)-methyltransferase CQZ96_003680 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CQZ96_003685 PF07859 alpha/beta hydrolase fold CQZ96_003685 PF00331 Glycosyl hydrolase family 10 CQZ96_003690 PF10431 C-terminal, D2-small domain, of ClpB protein CQZ96_003690 PF02861 Clp amino terminal domain, pathogenicity island component CQZ96_003690 PF17871 AAA lid domain CQZ96_003690 PF00004 ATPase family associated with various cellular activities (AAA) CQZ96_003690 PF07724 AAA domain (Cdc48 subfamily) CQZ96_003695 PF02617 ATP-dependent Clp protease adaptor protein ClpS CQZ96_003705 PF02774 Semialdehyde dehydrogenase, dimerisation domain CQZ96_003705 PF01118 Semialdehyde dehydrogenase, NAD binding domain CQZ96_003710 PF17158 Membrane-associated sensor, integral membrane domain CQZ96_003710 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_003725 PF00583 Acetyltransferase (GNAT) family CQZ96_003745 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CQZ96_003750 PF00585 C-terminal regulatory domain of Threonine dehydratase CQZ96_003750 PF00291 Pyridoxal-phosphate dependent enzyme CQZ96_003765 PF02254 TrkA-N domain CQZ96_003765 PF02080 TrkA-C domain CQZ96_003770 PF02386 Cation transport protein CQZ96_003775 PF03969 AFG1-like ATPase CQZ96_003785 PF00743 Flavin-binding monooxygenase-like CQZ96_003790 PF03956 Lysine exporter LysO CQZ96_003795 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CQZ96_003815 PF16970 Type-1 fimbrial protein, A CQZ96_003820 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CQZ96_003820 PF02753 Pili assembly chaperone PapD, C-terminal domain CQZ96_003825 PF13954 PapC N-terminal domain CQZ96_003825 PF00577 Outer membrane usher protein CQZ96_003825 PF13953 PapC C-terminal domain CQZ96_003840 PF00216 Bacterial DNA-binding protein CQZ96_003845 PF00575 S1 RNA binding domain CQZ96_003850 PF02224 Cytidylate kinase CQZ96_003860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CQZ96_003870 PF03167 Uracil DNA glycosylase superfamily CQZ96_003880 PF03934 Type II secretion system (T2SS), protein K CQZ96_003885 PF07963 Prokaryotic N-terminal methylation motif CQZ96_003885 PF11612 Type II secretion system (T2SS), protein J CQZ96_003890 PF07963 Prokaryotic N-terminal methylation motif CQZ96_003890 PF02501 Type II secretion system (T2SS), protein I CQZ96_003905 PF01026 TatD related DNase CQZ96_003915 PF09115 DNA polymerase III, delta subunit, C terminal CQZ96_003920 PF02348 Cytidylyltransferase CQZ96_003925 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CQZ96_003930 PF00664 ABC transporter transmembrane region CQZ96_003930 PF00005 ABC transporter CQZ96_003935 PF02472 Biopolymer transport protein ExbD/TolR CQZ96_003940 PF01618 MotA/TolQ/ExbB proton channel family CQZ96_003945 PF17762 HTH domain found in ParB protein CQZ96_003945 PF02195 ParB-like nuclease domain CQZ96_003950 PF13614 AAA domain CQZ96_003955 PF02527 rRNA small subunit methyltransferase G CQZ96_003960 PF00483 Nucleotidyl transferase CQZ96_003965 PF01636 Phosphotransferase enzyme family CQZ96_003970 PF04453 LPS transport system D CQZ96_003970 PF03968 OstA-like protein CQZ96_003975 PF09312 SurA N-terminal domain CQZ96_003975 PF00639 PPIC-type PPIASE domain CQZ96_003980 PF17209 Hfq protein CQZ96_003990 PF01119 DNA mismatch repair protein, C-terminal domain CQZ96_003990 PF08676 MutL C terminal dimerisation domain CQZ96_003995 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CQZ96_004000 PF00849 RNA pseudouridylate synthase CQZ96_004000 PF01479 S4 domain CQZ96_004020 PF00849 RNA pseudouridylate synthase CQZ96_004020 PF01479 S4 domain CQZ96_004025 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_004030 PF02082 Transcriptional regulator CQZ96_004035 PF04284 Protein of unknown function (DUF441) CQZ96_004045 PF03707 Bacterial signalling protein N terminal repeat CQZ96_004045 PF00563 EAL domain CQZ96_004045 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_004050 PF03616 Sodium/glutamate symporter CQZ96_004060 PF00027 Cyclic nucleotide-binding domain CQZ96_004060 PF00520 Ion transport protein CQZ96_004065 PF01037 Lrp/AsnC ligand binding domain CQZ96_004070 PF06039 Malate:quinone oxidoreductase (Mqo) CQZ96_004085 PF11791 Aconitate B N-terminal domain CQZ96_004085 PF06434 Aconitate hydratase 2 N-terminus CQZ96_004085 PF00330 Aconitase family (aconitate hydratase) CQZ96_004105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_004105 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_004115 PF00296 Luciferase-like monooxygenase CQZ96_004120 PF03180 NLPA lipoprotein CQZ96_004125 PF03180 NLPA lipoprotein CQZ96_004130 PF00005 ABC transporter CQZ96_004130 PF09383 NIL domain CQZ96_004135 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_004145 PF06071 Protein of unknown function (DUF933) CQZ96_004145 PF01926 50S ribosome-binding GTPase CQZ96_004150 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CQZ96_004150 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CQZ96_004175 PF03591 AzlC protein CQZ96_004180 PF05437 Branched-chain amino acid transport protein (AzlD) CQZ96_004190 PF02222 ATP-grasp domain CQZ96_004195 PF01909 Nucleotidyltransferase domain CQZ96_004195 PF01966 HD domain CQZ96_004195 PF08335 GlnD PII-uridylyltransferase CQZ96_004200 PF00155 Aminotransferase class I and II CQZ96_004205 PF07715 TonB-dependent Receptor Plug Domain CQZ96_004205 PF00593 TonB dependent receptor CQZ96_004215 PF00873 AcrB/AcrD/AcrF family CQZ96_004225 PF02311 AraC-like ligand binding domain CQZ96_004225 PF12833 Helix-turn-helix domain CQZ96_004230 PF00255 Glutathione peroxidase CQZ96_004235 PF01641 SelR domain CQZ96_004240 PF00155 Aminotransferase class I and II CQZ96_004245 PF17763 Glutaminase/Asparaginase C-terminal domain CQZ96_004245 PF00710 Asparaginase, N-terminal CQZ96_004260 PF00814 Glycoprotease family CQZ96_004265 PF01165 Ribosomal protein S21 CQZ96_004270 PF09424 Yqey-like protein CQZ96_004285 PF01435 Peptidase family M48 CQZ96_004290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQZ96_004290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQZ96_004305 PF13193 AMP-binding enzyme C-terminal domain CQZ96_004305 PF00501 AMP-binding enzyme CQZ96_004315 PF07244 Surface antigen variable number repeat CQZ96_004315 PF17243 POTRA domain TamA domain 1 CQZ96_004315 PF01103 Surface antigen CQZ96_004320 PF07690 Major Facilitator Superfamily CQZ96_004325 PF03232 Ubiquinone biosynthesis protein COQ7 CQZ96_004340 PF02152 Dihydroneopterin aldolase CQZ96_004345 PF03109 ABC1 family CQZ96_004350 PF00899 ThiF family CQZ96_004360 PF04229 GrpB protein CQZ96_004370 PF01709 Transcriptional regulator CQZ96_004375 PF01553 Acyltransferase CQZ96_004415 PF00392 Bacterial regulatory proteins, gntR family CQZ96_004415 PF07729 FCD domain CQZ96_004420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQZ96_004420 PF00364 Biotin-requiring enzyme CQZ96_004420 PF02785 Biotin carboxylase C-terminal domain CQZ96_004420 PF00289 Biotin carboxylase, N-terminal domain CQZ96_004425 PF01425 Amidase CQZ96_004435 PF01965 DJ-1/PfpI family CQZ96_004440 PF00375 Sodium:dicarboxylate symporter family CQZ96_004450 PF00440 Bacterial regulatory proteins, tetR family CQZ96_004480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_004480 PF03466 LysR substrate binding domain CQZ96_004485 PF02390 Putative methyltransferase CQZ96_004490 PF07690 Major Facilitator Superfamily CQZ96_004495 PF00440 Bacterial regulatory proteins, tetR family CQZ96_004500 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CQZ96_004505 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_004510 PF00005 ABC transporter CQZ96_004515 PF00291 Pyridoxal-phosphate dependent enzyme CQZ96_004520 PF01177 Asp/Glu/Hydantoin racemase CQZ96_004545 PF01979 Amidohydrolase family CQZ96_004545 PF13382 Adenine deaminase C-terminal domain CQZ96_004555 PF03466 LysR substrate binding domain CQZ96_004555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_004565 PF00392 Bacterial regulatory proteins, gntR family CQZ96_004565 PF00155 Aminotransferase class I and II CQZ96_004585 PF01389 OmpA-like transmembrane domain CQZ96_004585 PF00691 OmpA family CQZ96_004590 PF01979 Amidohydrolase family CQZ96_004595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CQZ96_004595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CQZ96_004615 PF02926 THUMP domain CQZ96_004615 PF10672 S-adenosylmethionine-dependent methyltransferase CQZ96_004615 PF01170 Putative RNA methylase family UPF0020 CQZ96_004625 PF07724 AAA domain (Cdc48 subfamily) CQZ96_004625 PF02861 Clp amino terminal domain, pathogenicity island component CQZ96_004625 PF00004 ATPase family associated with various cellular activities (AAA) CQZ96_004625 PF10431 C-terminal, D2-small domain, of ClpB protein CQZ96_004625 PF17871 AAA lid domain CQZ96_004635 PF00132 Bacterial transferase hexapeptide (six repeats) CQZ96_004650 PF00266 Aminotransferase class-V CQZ96_004680 PF02566 OsmC-like protein CQZ96_004685 PF00027 Cyclic nucleotide-binding domain CQZ96_004685 PF13545 Crp-like helix-turn-helix domain CQZ96_004690 PF00248 Aldo/keto reductase family CQZ96_004705 PF01435 Peptidase family M48 CQZ96_004710 PF00709 Adenylosuccinate synthetase CQZ96_004715 PF13393 Histidyl-tRNA synthetase CQZ96_004725 PF00857 Isochorismatase family CQZ96_004730 PF01037 Lrp/AsnC ligand binding domain CQZ96_004735 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CQZ96_004740 PF01037 Lrp/AsnC ligand binding domain CQZ96_004760 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CQZ96_004760 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CQZ96_004770 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CQZ96_004770 PF02272 DHHA1 domain CQZ96_004770 PF01411 tRNA synthetases class II (A) CQZ96_004785 PF11799 impB/mucB/samB family C-terminal domain CQZ96_004785 PF11798 IMS family HHH motif CQZ96_004785 PF13438 Domain of unknown function (DUF4113) CQZ96_004785 PF00817 impB/mucB/samB family CQZ96_005060 PF01842 ACT domain CQZ96_005060 PF13840 ACT domain CQZ96_005060 PF00696 Amino acid kinase family CQZ96_005065 PF02599 Global regulator protein family CQZ96_005070 PF01351 Ribonuclease HII CQZ96_005080 PF01292 Prokaryotic cytochrome b561 CQZ96_005090 PF00962 Adenosine/AMP deaminase CQZ96_005095 PF00860 Permease family CQZ96_005100 PF02321 Outer membrane efflux protein CQZ96_005105 PF00873 AcrB/AcrD/AcrF family CQZ96_005110 PF00873 AcrB/AcrD/AcrF family CQZ96_005115 PF13533 Biotin-lipoyl like CQZ96_005125 PF07715 TonB-dependent Receptor Plug Domain CQZ96_005125 PF00593 TonB dependent receptor CQZ96_005130 PF00593 TonB dependent receptor CQZ96_005130 PF07715 TonB-dependent Receptor Plug Domain CQZ96_005190 PF07043 Protein of unknown function (DUF1328) CQZ96_005220 PF11992 Domain of unknown function (DUF3488) CQZ96_005220 PF13559 Domain of unknown function (DUF4129) CQZ96_005220 PF01841 Transglutaminase-like superfamily CQZ96_005230 PF17863 AAA lid domain CQZ96_005230 PF07726 ATPase family associated with various cellular activities (AAA) CQZ96_005240 PF04328 Selenoprotein, putative CQZ96_005245 PF02554 Carbon starvation protein CstA CQZ96_005245 PF13722 5TM C-terminal transporter carbon starvation CstA CQZ96_005250 PF08207 Elongation factor P (EF-P) KOW-like domain CQZ96_005250 PF01132 Elongation factor P (EF-P) OB domain CQZ96_005250 PF09285 Elongation factor P, C-terminal CQZ96_005255 PF04055 Radical SAM superfamily CQZ96_005270 PF01197 Ribosomal protein L31 CQZ96_005275 PF13593 SBF-like CPA transporter family (DUF4137) CQZ96_005280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CQZ96_005285 PF07690 Major Facilitator Superfamily CQZ96_005290 PF13654 AAA domain CQZ96_005290 PF05362 Lon protease (S16) C-terminal proteolytic domain CQZ96_005295 PF00462 Glutaredoxin CQZ96_005300 PF00202 Aminotransferase class-III CQZ96_005305 PF03466 LysR substrate binding domain CQZ96_005305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_005310 PF01476 LysM domain CQZ96_005310 PF01551 Peptidase family M23 CQZ96_005315 PF01975 Survival protein SurE CQZ96_005330 PF07943 Penicillin-binding protein 5, C-terminal domain CQZ96_005330 PF00768 D-alanyl-D-alanine carboxypeptidase CQZ96_005335 PF00132 Bacterial transferase hexapeptide (six repeats) CQZ96_005350 PF00293 NUDIX domain CQZ96_005360 PF04356 Protein of unknown function (DUF489) CQZ96_005365 PF08328 Adenylosuccinate lyase C-terminal CQZ96_005365 PF00206 Lyase CQZ96_005375 PF01638 HxlR-like helix-turn-helix CQZ96_005380 PF05368 NmrA-like family CQZ96_005400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CQZ96_005400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CQZ96_005410 PF00892 EamA-like transporter family CQZ96_005420 PF12344 Ultra-violet resistance protein B CQZ96_005420 PF17757 UvrB interaction domain CQZ96_005420 PF02151 UvrB/uvrC motif CQZ96_005420 PF04851 Type III restriction enzyme, res subunit CQZ96_005420 PF00271 Helicase conserved C-terminal domain CQZ96_005430 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_005430 PF00072 Response regulator receiver domain CQZ96_005435 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_005435 PF00072 Response regulator receiver domain CQZ96_005445 PF00155 Aminotransferase class I and II CQZ96_005485 PF04542 Sigma-70 region 2 CQZ96_005485 PF08281 Sigma-70, region 4 CQZ96_005495 PF04304 Protein of unknown function (DUF454) CQZ96_005500 PF01126 Heme oxygenase CQZ96_005510 PF00873 AcrB/AcrD/AcrF family CQZ96_005515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQZ96_005515 PF00529 HlyD membrane-fusion protein of T1SS CQZ96_005520 PF00072 Response regulator receiver domain CQZ96_005520 PF00486 Transcriptional regulatory protein, C terminal CQZ96_005525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_005525 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_005525 PF00672 HAMP domain CQZ96_005530 PF00158 Sigma-54 interaction domain CQZ96_005530 PF06505 Activator of aromatic catabolism CQZ96_005530 PF02954 Bacterial regulatory protein, Fis family CQZ96_005530 PF02830 V4R domain CQZ96_005535 PF06099 Phenol hydroxylase subunit CQZ96_005540 PF02332 Methane/Phenol/Toluene Hydroxylase CQZ96_005545 PF02406 MmoB/DmpM family CQZ96_005550 PF02332 Methane/Phenol/Toluene Hydroxylase CQZ96_005550 PF04945 YHS domain CQZ96_005560 PF00970 Oxidoreductase FAD-binding domain CQZ96_005560 PF00175 Oxidoreductase NAD-binding domain CQZ96_005560 PF00111 2Fe-2S iron-sulfur cluster binding domain CQZ96_005565 PF00775 Dioxygenase CQZ96_005565 PF04444 Catechol dioxygenase N terminus CQZ96_005575 PF00970 Oxidoreductase FAD-binding domain CQZ96_005575 PF00175 Oxidoreductase NAD-binding domain CQZ96_005575 PF00111 2Fe-2S iron-sulfur cluster binding domain CQZ96_005580 PF00171 Aldehyde dehydrogenase family CQZ96_005585 PF00355 Rieske [2Fe-2S] domain CQZ96_005585 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CQZ96_005590 PF07859 alpha/beta hydrolase fold CQZ96_005595 PF02028 BCCT, betaine/carnitine/choline family transporter CQZ96_005600 PF00180 Isocitrate/isopropylmalate dehydrogenase CQZ96_005605 PF03466 LysR substrate binding domain CQZ96_005605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_005665 PF04717 Type VI secretion system, phage-baseplate injector CQZ96_005670 PF00593 TonB dependent receptor CQZ96_005670 PF07715 TonB-dependent Receptor Plug Domain CQZ96_005690 PF04183 IucA / IucC family CQZ96_005690 PF06276 Ferric iron reductase FhuF-like transporter CQZ96_005695 PF06276 Ferric iron reductase FhuF-like transporter CQZ96_005695 PF04183 IucA / IucC family CQZ96_005700 PF07690 Major Facilitator Superfamily CQZ96_005705 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CQZ96_005710 PF04183 IucA / IucC family CQZ96_005710 PF06276 Ferric iron reductase FhuF-like transporter CQZ96_005715 PF00593 TonB dependent receptor CQZ96_005715 PF07715 TonB-dependent Receptor Plug Domain CQZ96_005720 PF02803 Thiolase, C-terminal domain CQZ96_005720 PF00108 Thiolase, N-terminal domain CQZ96_005725 PF01144 Coenzyme A transferase CQZ96_005730 PF01144 Coenzyme A transferase CQZ96_005735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_005735 PF03466 LysR substrate binding domain CQZ96_005750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQZ96_005750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQZ96_005755 PF00378 Enoyl-CoA hydratase/isomerase CQZ96_005760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_005760 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_005760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_005760 PF12806 Acetyl-CoA dehydrogenase C-terminal like CQZ96_005770 PF07690 Major Facilitator Superfamily CQZ96_005780 PF01144 Coenzyme A transferase CQZ96_005785 PF01144 Coenzyme A transferase CQZ96_005790 PF07690 Major Facilitator Superfamily CQZ96_005795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_005795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_005795 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_005800 PF00378 Enoyl-CoA hydratase/isomerase CQZ96_005810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQZ96_005810 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CQZ96_005810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQZ96_005815 PF02803 Thiolase, C-terminal domain CQZ96_005815 PF00108 Thiolase, N-terminal domain CQZ96_005820 PF09339 IclR helix-turn-helix domain CQZ96_005825 PF07690 Major Facilitator Superfamily CQZ96_005830 PF03060 Nitronate monooxygenase CQZ96_005835 PF09339 IclR helix-turn-helix domain CQZ96_005840 PF02515 CoA-transferase family III CQZ96_005845 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_005845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_005845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_005850 PF07690 Major Facilitator Superfamily CQZ96_005870 PF00884 Sulfatase CQZ96_005875 PF03781 Sulfatase-modifying factor enzyme 1 CQZ96_005880 PF00902 Sec-independent protein translocase protein (TatC) CQZ96_005885 PF02416 mttA/Hcf106 family CQZ96_005890 PF02416 mttA/Hcf106 family CQZ96_005895 PF16655 PhoD-like phosphatase, N-terminal domain CQZ96_005895 PF09423 PhoD-like phosphatase CQZ96_005905 PF00561 alpha/beta hydrolase fold CQZ96_005910 PF00107 Zinc-binding dehydrogenase CQZ96_005910 PF08240 Alcohol dehydrogenase GroES-like domain CQZ96_005915 PF02264 LamB porin CQZ96_005920 PF00171 Aldehyde dehydrogenase family CQZ96_005925 PF02653 Branched-chain amino acid transport system / permease component CQZ96_005930 PF00005 ABC transporter CQZ96_005940 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CQZ96_005945 PF01380 SIS domain CQZ96_005945 PF01418 Helix-turn-helix domain, rpiR family CQZ96_005950 PF13419 Haloacid dehalogenase-like hydrolase CQZ96_005955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQZ96_005955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQZ96_005960 PF00171 Aldehyde dehydrogenase family CQZ96_005970 PF01842 ACT domain CQZ96_005970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQZ96_005970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQZ96_005980 PF02416 mttA/Hcf106 family CQZ96_005985 PF02416 mttA/Hcf106 family CQZ96_005990 PF00902 Sec-independent protein translocase protein (TatC) CQZ96_005995 PF00107 Zinc-binding dehydrogenase CQZ96_005995 PF08240 Alcohol dehydrogenase GroES-like domain CQZ96_006000 PF00171 Aldehyde dehydrogenase family CQZ96_006025 PF02954 Bacterial regulatory protein, Fis family CQZ96_006025 PF13426 PAS domain CQZ96_006025 PF00158 Sigma-54 interaction domain CQZ96_006030 PF04172 LrgB-like family CQZ96_006035 PF03788 LrgA family CQZ96_006040 PF01654 Cytochrome bd terminal oxidase subunit I CQZ96_006045 PF02322 Cytochrome bd terminal oxidase subunit II CQZ96_006055 PF03573 outer membrane porin, OprD family CQZ96_006060 PF00775 Dioxygenase CQZ96_006060 PF04444 Catechol dioxygenase N terminus CQZ96_006065 PF01926 50S ribosome-binding GTPase CQZ96_006070 PF01926 50S ribosome-binding GTPase CQZ96_006075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_006075 PF03466 LysR substrate binding domain CQZ96_006080 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CQZ96_006080 PF13378 Enolase C-terminal domain-like CQZ96_006085 PF02426 Muconolactone delta-isomerase CQZ96_006090 PF01144 Coenzyme A transferase CQZ96_006095 PF01144 Coenzyme A transferase CQZ96_006100 PF00108 Thiolase, N-terminal domain CQZ96_006100 PF02803 Thiolase, C-terminal domain CQZ96_006105 PF12146 Serine aminopeptidase, S33 CQZ96_006110 PF01804 Penicillin amidase CQZ96_006115 PF00171 Aldehyde dehydrogenase family CQZ96_006125 PF02728 Copper amine oxidase, N3 domain CQZ96_006125 PF01179 Copper amine oxidase, enzyme domain CQZ96_006125 PF07833 Copper amine oxidase N-terminal domain CQZ96_006125 PF02727 Copper amine oxidase, N2 domain CQZ96_006130 PF02311 AraC-like ligand binding domain CQZ96_006130 PF12833 Helix-turn-helix domain CQZ96_006135 PF01613 Flavin reductase like domain CQZ96_006140 PF00111 2Fe-2S iron-sulfur cluster binding domain CQZ96_006140 PF00175 Oxidoreductase NAD-binding domain CQZ96_006155 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CQZ96_006155 PF00355 Rieske [2Fe-2S] domain CQZ96_006165 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_006170 PF01425 Amidase CQZ96_006180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQZ96_006180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQZ96_006185 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CQZ96_006185 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CQZ96_006190 PF12833 Helix-turn-helix domain CQZ96_006190 PF14525 AraC-binding-like domain CQZ96_006195 PF07690 Major Facilitator Superfamily CQZ96_006205 PF00355 Rieske [2Fe-2S] domain CQZ96_006205 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CQZ96_006210 PF00866 Ring hydroxylating beta subunit CQZ96_006215 PF00111 2Fe-2S iron-sulfur cluster binding domain CQZ96_006215 PF00175 Oxidoreductase NAD-binding domain CQZ96_006215 PF00970 Oxidoreductase FAD-binding domain CQZ96_006220 PF12833 Helix-turn-helix domain CQZ96_006220 PF14525 AraC-binding-like domain CQZ96_006230 PF01613 Flavin reductase like domain CQZ96_006245 PF01738 Dienelactone hydrolase family CQZ96_006260 PF12833 Helix-turn-helix domain CQZ96_006260 PF14525 AraC-binding-like domain CQZ96_006270 PF12706 Beta-lactamase superfamily domain CQZ96_006275 PF00324 Amino acid permease CQZ96_006280 PF00266 Aminotransferase class-V CQZ96_006285 PF01037 Lrp/AsnC ligand binding domain CQZ96_006290 PF03459 TOBE domain CQZ96_006290 PF00005 ABC transporter CQZ96_006295 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_006305 PF02634 FdhD/NarQ family CQZ96_006310 PF00384 Molybdopterin oxidoreductase CQZ96_006315 PF02391 MoaE protein CQZ96_006325 PF12804 MobA-like NTP transferase domain CQZ96_006330 PF03454 MoeA C-terminal region (domain IV) CQZ96_006330 PF00994 Probable molybdopterin binding domain CQZ96_006330 PF03453 MoeA N-terminal region (domain I and II) CQZ96_006335 PF00994 Probable molybdopterin binding domain CQZ96_006335 PF01967 MoaC family CQZ96_006340 PF06463 Molybdenum Cofactor Synthesis C CQZ96_006340 PF04055 Radical SAM superfamily CQZ96_006355 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CQZ96_006355 PF02753 Pili assembly chaperone PapD, C-terminal domain CQZ96_006365 PF13953 PapC C-terminal domain CQZ96_006365 PF13954 PapC N-terminal domain CQZ96_006365 PF00577 Outer membrane usher protein CQZ96_006370 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CQZ96_006370 PF02753 Pili assembly chaperone PapD, C-terminal domain CQZ96_006375 PF16970 Type-1 fimbrial protein, A CQZ96_006385 PF05188 MutS domain II CQZ96_006385 PF05192 MutS domain III CQZ96_006385 PF01624 MutS domain I CQZ96_006385 PF05190 MutS family domain IV CQZ96_006385 PF00488 MutS domain V CQZ96_006395 PF00037 4Fe-4S binding domain CQZ96_006395 PF11953 Domain of unknown function (DUF3470) CQZ96_006405 PF00282 Pyridoxal-dependent decarboxylase conserved domain CQZ96_006410 PF00202 Aminotransferase class-III CQZ96_006420 PF00593 TonB dependent receptor CQZ96_006420 PF07660 Secretin and TonB N terminus short domain CQZ96_006420 PF07715 TonB-dependent Receptor Plug Domain CQZ96_006425 PF01925 Sulfite exporter TauE/SafE CQZ96_006440 PF00487 Fatty acid desaturase CQZ96_006445 PF00970 Oxidoreductase FAD-binding domain CQZ96_006445 PF00175 Oxidoreductase NAD-binding domain CQZ96_006445 PF00111 2Fe-2S iron-sulfur cluster binding domain CQZ96_006450 PF00440 Bacterial regulatory proteins, tetR family CQZ96_006455 PF01113 Dihydrodipicolinate reductase, N-terminus CQZ96_006455 PF05173 Dihydrodipicolinate reductase, C-terminus CQZ96_006465 PF00501 AMP-binding enzyme CQZ96_006470 PF18337 RapA N-terminal Tudor like domain CQZ96_006470 PF00271 Helicase conserved C-terminal domain CQZ96_006470 PF18339 RapA N-terminal Tudor like domain 1 CQZ96_006470 PF00176 SNF2 family N-terminal domain CQZ96_006470 PF12137 RNA polymerase recycling family C-terminal CQZ96_006475 PF00849 RNA pseudouridylate synthase CQZ96_006505 PF13411 MerR HTH family regulatory protein CQZ96_006510 PF01758 Sodium Bile acid symporter family CQZ96_006515 PF01022 Bacterial regulatory protein, arsR family CQZ96_006520 PF03960 ArsC family CQZ96_006530 PF00037 4Fe-4S binding domain CQZ96_006540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_006540 PF03466 LysR substrate binding domain CQZ96_006545 PF02525 Flavodoxin-like fold CQZ96_006550 PF13192 Thioredoxin domain CQZ96_006550 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_006565 PF05816 Toxic anion resistance protein (TelA) CQZ96_006585 PF08299 Bacterial dnaA protein helix-turn-helix CQZ96_006585 PF11638 DnaA N-terminal domain CQZ96_006585 PF00308 Bacterial dnaA protein CQZ96_006590 PF01594 AI-2E family transporter CQZ96_006595 PF02769 AIR synthase related protein, C-terminal domain CQZ96_006595 PF00586 AIR synthase related protein, N-terminal domain CQZ96_006600 PF00551 Formyl transferase CQZ96_006615 PF06965 Na+/H+ antiporter 1 CQZ96_006615 PF01343 Peptidase family S49 CQZ96_006625 PF00753 Metallo-beta-lactamase superfamily CQZ96_006625 PF13567 Domain of unknown function (DUF4131) CQZ96_006625 PF03772 Competence protein CQZ96_006630 PF00005 ABC transporter CQZ96_006635 PF02687 FtsX-like permease family CQZ96_006635 PF12704 MacB-like periplasmic core domain CQZ96_006645 PF01810 LysE type translocator CQZ96_006650 PF00106 short chain dehydrogenase CQZ96_006655 PF00743 Flavin-binding monooxygenase-like CQZ96_006660 PF00440 Bacterial regulatory proteins, tetR family CQZ96_006665 PF07694 5TMR of 5TMR-LYT CQZ96_006665 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_006680 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CQZ96_006680 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CQZ96_006685 PF00491 Arginase family CQZ96_006690 PF01979 Amidohydrolase family CQZ96_006695 PF00324 Amino acid permease CQZ96_006700 PF00221 Aromatic amino acid lyase CQZ96_006705 PF01175 Urocanase Rossmann-like domain CQZ96_006705 PF17392 Urocanase C-terminal domain CQZ96_006705 PF17391 Urocanase N-terminal domain CQZ96_006710 PF05962 HutD CQZ96_006715 PF07702 UTRA domain CQZ96_006715 PF00392 Bacterial regulatory proteins, gntR family CQZ96_006720 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CQZ96_006720 PF17287 POTRA domain CQZ96_006720 PF08479 POTRA domain, ShlB-type CQZ96_006725 PF05860 haemagglutination activity domain CQZ96_006750 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CQZ96_006750 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CQZ96_006755 PF00270 DEAD/DEAH box helicase CQZ96_006755 PF11898 Domain of unknown function (DUF3418) CQZ96_006755 PF04408 Helicase associated domain (HA2) CQZ96_006755 PF00271 Helicase conserved C-terminal domain CQZ96_006755 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CQZ96_006760 PF00578 AhpC/TSA family CQZ96_006760 PF10417 C-terminal domain of 1-Cys peroxiredoxin CQZ96_006780 PF01596 O-methyltransferase CQZ96_006810 PF03060 Nitronate monooxygenase CQZ96_006815 PF05163 DinB family CQZ96_006825 PF01207 Dihydrouridine synthase (Dus) CQZ96_006830 PF07759 Protein of unknown function (DUF1615) CQZ96_006845 PF00696 Amino acid kinase family CQZ96_006845 PF01472 PUA domain CQZ96_006850 PF01926 50S ribosome-binding GTPase CQZ96_006850 PF01018 GTP1/OBG CQZ96_006855 PF00472 RF-1 domain CQZ96_006865 PF00375 Sodium:dicarboxylate symporter family CQZ96_006870 PF02885 Glycosyl transferase family, helical bundle domain CQZ96_006870 PF00591 Glycosyl transferase family, a/b domain CQZ96_006880 PF07023 Protein of unknown function (DUF1315) CQZ96_006885 PF01513 ATP-NAD kinase CQZ96_006890 PF00912 Transglycosylase CQZ96_006890 PF00905 Penicillin binding protein transpeptidase domain CQZ96_006890 PF14814 Bifunctional transglycosylase second domain CQZ96_006900 PF00293 NUDIX domain CQZ96_006910 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_006910 PF08521 Two-component sensor kinase N-terminal CQZ96_006910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_006915 PF00486 Transcriptional regulatory protein, C terminal CQZ96_006915 PF00072 Response regulator receiver domain CQZ96_006925 PF00437 Type II/IV secretion system protein CQZ96_006925 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CQZ96_006960 PF00202 Aminotransferase class-III CQZ96_006965 PF02581 Thiamine monophosphate synthase CQZ96_006985 PF01980 tRNA-methyltransferase O CQZ96_006985 PF18389 TrmO C-terminal domain CQZ96_006990 PF00175 Oxidoreductase NAD-binding domain CQZ96_006990 PF00970 Oxidoreductase FAD-binding domain CQZ96_006995 PF00675 Insulinase (Peptidase family M16) CQZ96_006995 PF05193 Peptidase M16 inactive domain CQZ96_007000 PF02567 Phenazine biosynthesis-like protein CQZ96_007015 PF01613 Flavin reductase like domain CQZ96_007025 PF00860 Permease family CQZ96_007040 PF01040 UbiA prenyltransferase family CQZ96_007045 PF04345 Chorismate lyase CQZ96_007055 PF03449 Transcription elongation factor, N-terminal CQZ96_007055 PF01272 Transcription elongation factor, GreA/GreB, C-term CQZ96_007060 PF00464 Serine hydroxymethyltransferase CQZ96_007160 PF01381 Helix-turn-helix CQZ96_007185 PF00313 'Cold-shock' DNA-binding domain CQZ96_007220 PF00149 Calcineurin-like phosphoesterase CQZ96_007230 PF00005 ABC transporter CQZ96_007235 PF01061 ABC-2 type transporter CQZ96_007240 PF14489 QueF-like protein CQZ96_007240 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CQZ96_007250 PF01098 Cell cycle protein CQZ96_007255 PF13406 Transglycosylase SLT domain CQZ96_007260 PF05036 Sporulation related domain CQZ96_007260 PF03330 Lytic transglycolase CQZ96_007295 PF12833 Helix-turn-helix domain CQZ96_007305 PF00889 Elongation factor TS CQZ96_007310 PF00318 Ribosomal protein S2 CQZ96_007315 PF00557 Metallopeptidase family M24 CQZ96_007330 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_007330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CQZ96_007335 PF00005 ABC transporter CQZ96_007335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQZ96_007340 PF12911 N-terminal TM domain of oligopeptide transport permease C CQZ96_007340 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_007345 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_007350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQZ96_007355 PF01464 Transglycosylase SLT domain CQZ96_007355 PF01476 LysM domain CQZ96_007360 PF00929 Exonuclease CQZ96_007370 PF09297 NADH pyrophosphatase zinc ribbon domain CQZ96_007370 PF00293 NUDIX domain CQZ96_007380 PF04972 BON domain CQZ96_007385 PF02021 Uncharacterised protein family UPF0102 CQZ96_007395 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CQZ96_007405 PF01494 FAD binding domain CQZ96_007410 PF01494 FAD binding domain CQZ96_007420 PF05195 Aminopeptidase P, N-terminal domain CQZ96_007420 PF00557 Metallopeptidase family M24 CQZ96_007460 PF03466 LysR substrate binding domain CQZ96_007460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_007465 PF12146 Serine aminopeptidase, S33 CQZ96_007485 PF00486 Transcriptional regulatory protein, C terminal CQZ96_007485 PF00072 Response regulator receiver domain CQZ96_007490 PF13493 Domain of unknown function (DUF4118) CQZ96_007490 PF02702 Osmosensitive K+ channel His kinase sensor domain CQZ96_007490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_007490 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_007495 PF02669 K+-transporting ATPase, c chain CQZ96_007505 PF03814 Potassium-transporting ATPase A subunit CQZ96_007510 PF02673 Bacitracin resistance protein BacA CQZ96_007515 PF17209 Hfq protein CQZ96_007525 PF00486 Transcriptional regulatory protein, C terminal CQZ96_007525 PF00072 Response regulator receiver domain CQZ96_007530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_007530 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_007530 PF00672 HAMP domain CQZ96_007545 PF00403 Heavy-metal-associated domain CQZ96_007550 PF00376 MerR family regulatory protein CQZ96_007550 PF09278 MerR, DNA binding CQZ96_007555 PF01011 PQQ enzyme repeat CQZ96_007555 PF13360 PQQ-like domain CQZ96_007560 PF04966 Carbohydrate-selective porin, OprB family CQZ96_007565 PF05048 Periplasmic copper-binding protein (NosD) CQZ96_007570 PF01487 Type I 3-dehydroquinase CQZ96_007575 PF00775 Dioxygenase CQZ96_007580 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CQZ96_007580 PF00775 Dioxygenase CQZ96_007585 PF02627 Carboxymuconolactone decarboxylase family CQZ96_007590 PF07690 Major Facilitator Superfamily CQZ96_007595 PF00561 alpha/beta hydrolase fold CQZ96_007600 PF10397 Adenylosuccinate lyase C-terminus CQZ96_007600 PF00206 Lyase CQZ96_007605 PF00108 Thiolase, N-terminal domain CQZ96_007605 PF02803 Thiolase, C-terminal domain CQZ96_007610 PF01144 Coenzyme A transferase CQZ96_007615 PF01144 Coenzyme A transferase CQZ96_007620 PF09339 IclR helix-turn-helix domain CQZ96_007620 PF01614 Bacterial transcriptional regulator CQZ96_007625 PF02627 Carboxymuconolactone decarboxylase family CQZ96_007630 PF00994 Probable molybdopterin binding domain CQZ96_007630 PF01967 MoaC family CQZ96_007635 PF02391 MoaE protein CQZ96_007645 PF06463 Molybdenum Cofactor Synthesis C CQZ96_007645 PF04055 Radical SAM superfamily CQZ96_007650 PF12804 MobA-like NTP transferase domain CQZ96_007655 PF01568 Molydopterin dinucleotide binding domain CQZ96_007655 PF00384 Molybdopterin oxidoreductase CQZ96_007655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CQZ96_007655 PF04324 BFD-like [2Fe-2S] binding domain CQZ96_007660 PF18267 Rubredoxin NAD+ reductase C-terminal domain CQZ96_007660 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CQZ96_007660 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_007660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CQZ96_007660 PF04324 BFD-like [2Fe-2S] binding domain CQZ96_007665 PF04324 BFD-like [2Fe-2S] binding domain CQZ96_007665 PF18267 Rubredoxin NAD+ reductase C-terminal domain CQZ96_007665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CQZ96_007665 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CQZ96_007665 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_007670 PF07690 Major Facilitator Superfamily CQZ96_007680 PF00005 ABC transporter CQZ96_007695 PF16671 Actin cross-linking domain CQZ96_007695 PF04717 Type VI secretion system, phage-baseplate injector CQZ96_007705 PF02801 Beta-ketoacyl synthase, C-terminal domain CQZ96_007705 PF00109 Beta-ketoacyl synthase, N-terminal domain CQZ96_007720 PF00109 Beta-ketoacyl synthase, N-terminal domain CQZ96_007720 PF02801 Beta-ketoacyl synthase, C-terminal domain CQZ96_007730 PF01494 FAD binding domain CQZ96_007750 PF00221 Aromatic amino acid lyase CQZ96_007765 PF07977 FabA-like domain CQZ96_007775 PF00550 Phosphopantetheine attachment site CQZ96_007780 PF00550 Phosphopantetheine attachment site CQZ96_007815 PF00419 Fimbrial protein CQZ96_007825 PF02753 Pili assembly chaperone PapD, C-terminal domain CQZ96_007825 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CQZ96_007830 PF13954 PapC N-terminal domain CQZ96_007830 PF13953 PapC C-terminal domain CQZ96_007830 PF00577 Outer membrane usher protein CQZ96_007835 PF00419 Fimbrial protein CQZ96_007850 PF00324 Amino acid permease CQZ96_007855 PF00171 Aldehyde dehydrogenase family CQZ96_007860 PF00202 Aminotransferase class-III CQZ96_007865 PF03466 LysR substrate binding domain CQZ96_007865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_007880 PF00577 Outer membrane usher protein CQZ96_007880 PF13953 PapC C-terminal domain CQZ96_007880 PF13954 PapC N-terminal domain CQZ96_007885 PF02753 Pili assembly chaperone PapD, C-terminal domain CQZ96_007885 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CQZ96_007890 PF16970 Type-1 fimbrial protein, A CQZ96_007895 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system CQZ96_007915 PF00577 Outer membrane usher protein CQZ96_007915 PF13953 PapC C-terminal domain CQZ96_007915 PF13954 PapC N-terminal domain CQZ96_007960 PF08240 Alcohol dehydrogenase GroES-like domain CQZ96_007960 PF09277 Erythronolide synthase, docking CQZ96_007960 PF16197 Ketoacyl-synthetase C-terminal extension CQZ96_007960 PF00109 Beta-ketoacyl synthase, N-terminal domain CQZ96_007960 PF02801 Beta-ketoacyl synthase, C-terminal domain CQZ96_007960 PF08659 KR domain CQZ96_007960 PF00698 Acyl transferase domain CQZ96_007960 PF08990 Erythronolide synthase docking CQZ96_007960 PF00550 Phosphopantetheine attachment site CQZ96_007960 PF14765 Polyketide synthase dehydratase CQZ96_007965 PF00440 Bacterial regulatory proteins, tetR family CQZ96_007965 PF16925 Tetracyclin repressor-like, C-terminal domain CQZ96_007970 PF00593 TonB dependent receptor CQZ96_007970 PF07715 TonB-dependent Receptor Plug Domain CQZ96_007970 PF07660 Secretin and TonB N terminus short domain CQZ96_007980 PF08946 Osmosensory transporter coiled coil CQZ96_007980 PF00083 Sugar (and other) transporter CQZ96_007990 PF07681 DoxX CQZ96_007995 PF07690 Major Facilitator Superfamily CQZ96_008000 PF03466 LysR substrate binding domain CQZ96_008000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_008005 PF08659 KR domain CQZ96_008005 PF00550 Phosphopantetheine attachment site CQZ96_008005 PF00109 Beta-ketoacyl synthase, N-terminal domain CQZ96_008005 PF00698 Acyl transferase domain CQZ96_008005 PF14765 Polyketide synthase dehydratase CQZ96_008005 PF02801 Beta-ketoacyl synthase, C-terminal domain CQZ96_008005 PF08240 Alcohol dehydrogenase GroES-like domain CQZ96_008005 PF00107 Zinc-binding dehydrogenase CQZ96_008005 PF16197 Ketoacyl-synthetase C-terminal extension CQZ96_008010 PF07715 TonB-dependent Receptor Plug Domain CQZ96_008010 PF00593 TonB dependent receptor CQZ96_008010 PF07660 Secretin and TonB N terminus short domain CQZ96_008020 PF08281 Sigma-70, region 4 CQZ96_008020 PF04542 Sigma-70 region 2 CQZ96_008030 PF07715 TonB-dependent Receptor Plug Domain CQZ96_008030 PF00593 TonB dependent receptor CQZ96_008040 PF03449 Transcription elongation factor, N-terminal CQZ96_008040 PF01272 Transcription elongation factor, GreA/GreB, C-term CQZ96_008045 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQZ96_008045 PF01464 Transglycosylase SLT domain CQZ96_008055 PF01171 PP-loop family CQZ96_008060 PF01464 Transglycosylase SLT domain CQZ96_008065 PF01435 Peptidase family M48 CQZ96_008085 PF01979 Amidohydrolase family CQZ96_008090 PF00929 Exonuclease CQZ96_008100 PF00324 Amino acid permease CQZ96_008110 PF00324 Amino acid permease CQZ96_008130 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CQZ96_008140 PF01812 5-formyltetrahydrofolate cyclo-ligase family CQZ96_008145 PF02190 ATP-dependent protease La (LON) substrate-binding domain CQZ96_008145 PF05362 Lon protease (S16) C-terminal proteolytic domain CQZ96_008145 PF00004 ATPase family associated with various cellular activities (AAA) CQZ96_008160 PF01678 Diaminopimelate epimerase CQZ96_008165 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CQZ96_008165 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CQZ96_008175 PF00324 Amino acid permease CQZ96_008180 PF18073 Rubredoxin metal binding domain CQZ96_008195 PF13180 PDZ domain CQZ96_008200 PF01784 NIF3 (NGG1p interacting factor 3) CQZ96_008205 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CQZ96_008205 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CQZ96_008230 PF00571 CBS domain CQZ96_008230 PF01769 Divalent cation transporter CQZ96_008230 PF03448 MgtE intracellular N domain CQZ96_008235 PF00873 AcrB/AcrD/AcrF family CQZ96_008240 PF03009 Glycerophosphoryl diester phosphodiesterase family CQZ96_008245 PF01219 Prokaryotic diacylglycerol kinase CQZ96_008255 PF00118 TCP-1/cpn60 chaperonin family CQZ96_008260 PF00166 Chaperonin 10 Kd subunit CQZ96_008270 PF00781 Diacylglycerol kinase catalytic domain CQZ96_008275 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CQZ96_008275 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CQZ96_008290 PF01266 FAD dependent oxidoreductase CQZ96_008290 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CQZ96_008295 PF00455 DeoR C terminal sensor domain CQZ96_008295 PF08220 DeoR-like helix-turn-helix domain CQZ96_008300 PF00083 Sugar (and other) transporter CQZ96_008315 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CQZ96_008315 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CQZ96_008335 PF09423 PhoD-like phosphatase CQZ96_008335 PF16655 PhoD-like phosphatase, N-terminal domain CQZ96_008360 PF00037 4Fe-4S binding domain CQZ96_008365 PF01467 Cytidylyltransferase-like CQZ96_008370 PF01668 SmpB protein CQZ96_008385 PF03358 NADPH-dependent FMN reductase CQZ96_008400 PF00849 RNA pseudouridylate synthase CQZ96_008400 PF01479 S4 domain CQZ96_008405 PF13525 Outer membrane lipoprotein CQZ96_008410 PF10410 DnaB-helicase binding domain of primase CQZ96_008410 PF08278 DNA primase DnaG DnaB-binding CQZ96_008410 PF08275 DNA primase catalytic core, N-terminal domain CQZ96_008410 PF01807 CHC2 zinc finger CQZ96_008420 PF01488 Shikimate / quinate 5-dehydrogenase CQZ96_008420 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CQZ96_008420 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CQZ96_008430 PF03550 Outer membrane lipoprotein LolB CQZ96_008435 PF08544 GHMP kinases C terminal CQZ96_008435 PF00288 GHMP kinases N terminal domain CQZ96_008460 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CQZ96_008460 PF14572 Phosphoribosyl synthetase-associated domain CQZ96_008465 PF01386 Ribosomal L25p family CQZ96_008470 PF01195 Peptidyl-tRNA hydrolase CQZ96_008475 PF02261 Aspartate decarboxylase CQZ96_008495 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CQZ96_008510 PF09335 SNARE associated Golgi protein CQZ96_008515 PF01810 LysE type translocator CQZ96_008530 PF04539 Sigma-70 region 3 CQZ96_008530 PF04545 Sigma-70, region 4 CQZ96_008530 PF04546 Sigma-70, non-essential region CQZ96_008530 PF00140 Sigma-70 factor, region 1.2 CQZ96_008530 PF03979 Sigma-70 factor, region 1.1 CQZ96_008530 PF04542 Sigma-70 region 2 CQZ96_008535 PF04359 Protein of unknown function (DUF493) CQZ96_008540 PF03099 Biotin/lipoate A/B protein ligase family CQZ96_008550 PF00465 Iron-containing alcohol dehydrogenase CQZ96_008555 PF13520 Amino acid permease CQZ96_008560 PF03358 NADPH-dependent FMN reductase CQZ96_008585 PF00588 SpoU rRNA Methylase family CQZ96_008590 PF14824 Sirohaem biosynthesis protein central CQZ96_008590 PF10414 Sirohaem synthase dimerisation region CQZ96_008590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CQZ96_008595 PF02403 Seryl-tRNA synthetase N-terminal domain CQZ96_008595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CQZ96_008605 PF03055 Retinal pigment epithelial membrane protein CQZ96_008610 PF03548 Outer membrane lipoprotein carrier protein LolA CQZ96_008615 PF01016 Ribosomal L27 protein CQZ96_008620 PF00829 Ribosomal prokaryotic L21 protein CQZ96_008625 PF00348 Polyprenyl synthetase CQZ96_008635 PF01569 PAP2 superfamily CQZ96_008640 PF00529 HlyD membrane-fusion protein of T1SS CQZ96_008640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQZ96_008645 PF00873 AcrB/AcrD/AcrF family CQZ96_008650 PF02321 Outer membrane efflux protein CQZ96_008655 PF01906 Putative heavy-metal-binding CQZ96_008660 PF01906 Putative heavy-metal-binding CQZ96_008685 PF10458 Valyl tRNA synthetase tRNA binding arm CQZ96_008685 PF00133 tRNA synthetases class I (I, L, M and V) CQZ96_008685 PF08264 Anticodon-binding domain of tRNA CQZ96_008695 PF04480 Protein of unknown function (DUF559) CQZ96_008700 PF00194 Eukaryotic-type carbonic anhydrase CQZ96_008715 PF00106 short chain dehydrogenase CQZ96_008735 PF00909 Ammonium Transporter Family CQZ96_008750 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_008750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_008750 PF08521 Two-component sensor kinase N-terminal CQZ96_008755 PF00486 Transcriptional regulatory protein, C terminal CQZ96_008755 PF00072 Response regulator receiver domain CQZ96_008760 PF08019 Phosphoethanolamine transferase EptA/EptB CQZ96_008760 PF00884 Sulfatase CQZ96_008765 PF07690 Major Facilitator Superfamily CQZ96_008775 PF01734 Patatin-like phospholipase CQZ96_008785 PF01145 SPFH domain / Band 7 family CQZ96_008790 PF00348 Polyprenyl synthetase CQZ96_008795 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_008800 PF04303 PrpF protein CQZ96_008805 PF00324 Amino acid permease CQZ96_008815 PF00589 Phage integrase family CQZ96_008815 PF13356 Arm DNA-binding domain CQZ96_008825 PF11799 impB/mucB/samB family C-terminal domain CQZ96_008825 PF00817 impB/mucB/samB family CQZ96_008825 PF13438 Domain of unknown function (DUF4113) CQZ96_008850 PF00959 Phage lysozyme CQZ96_008920 PF03869 Arc-like DNA binding domain CQZ96_009130 PF00717 Peptidase S24-like CQZ96_009200 PF00484 Carbonic anhydrase CQZ96_009205 PF00561 alpha/beta hydrolase fold CQZ96_009215 PF07715 TonB-dependent Receptor Plug Domain CQZ96_009215 PF00593 TonB dependent receptor CQZ96_009220 PF01521 Iron-sulphur cluster biosynthesis CQZ96_009220 PF01106 NifU-like domain CQZ96_009230 PF00378 Enoyl-CoA hydratase/isomerase CQZ96_009240 PF00440 Bacterial regulatory proteins, tetR family CQZ96_009275 PF00535 Glycosyl transferase family 2 CQZ96_009280 PF14883 Hypothetical glycosyl hydrolase family 13 CQZ96_009280 PF01522 Polysaccharide deacetylase CQZ96_009285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CQZ96_009290 PF02308 MgtC family CQZ96_009295 PF07152 YaeQ protein CQZ96_009300 PF02492 CobW/HypB/UreG, nucleotide-binding domain CQZ96_009300 PF07683 Cobalamin synthesis protein cobW C-terminal domain CQZ96_009320 PF03061 Thioesterase superfamily CQZ96_009325 PF01734 Patatin-like phospholipase CQZ96_009330 PF02417 Chromate transporter CQZ96_009335 PF03616 Sodium/glutamate symporter CQZ96_009345 PF00881 Nitroreductase family CQZ96_009350 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CQZ96_009350 PF14572 Phosphoribosyl synthetase-associated domain CQZ96_009355 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CQZ96_009365 PF10946 Protein of unknown function DUF2625 CQZ96_009390 PF00149 Calcineurin-like phosphoesterase CQZ96_009390 PF12320 Type 5 capsule protein repressor C-terminal domain CQZ96_009425 PF01168 Alanine racemase, N-terminal domain CQZ96_009430 PF00437 Type II/IV secretion system protein CQZ96_009435 PF00437 Type II/IV secretion system protein CQZ96_009440 PF01475 Ferric uptake regulator family CQZ96_009445 PF04355 SmpA / OmlA family CQZ96_009450 PF03658 RnfH family Ubiquitin CQZ96_009460 PF01814 Hemerythrin HHE cation binding domain CQZ96_009465 PF13230 Glutamine amidotransferases class-II CQZ96_009475 PF00696 Amino acid kinase family CQZ96_009480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CQZ96_009480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CQZ96_009480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CQZ96_009480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CQZ96_009485 PF00692 dUTPase CQZ96_009490 PF00580 UvrD/REP helicase N-terminal domain CQZ96_009490 PF13361 UvrD-like helicase C-terminal domain CQZ96_009495 PF13488 Glycine zipper CQZ96_009495 PF00691 OmpA family CQZ96_009500 PF01553 Acyltransferase CQZ96_009510 PF03775 Septum formation inhibitor MinC, C-terminal domain CQZ96_009515 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CQZ96_009520 PF03776 Septum formation topological specificity factor MinE CQZ96_009530 PF00463 Isocitrate lyase family CQZ96_009535 PF03466 LysR substrate binding domain CQZ96_009535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_009540 PF03471 Transporter associated domain CQZ96_009540 PF01595 Cyclin M transmembrane N-terminal domain CQZ96_009540 PF00571 CBS domain CQZ96_009545 PF03600 Citrate transporter CQZ96_009555 PF00107 Zinc-binding dehydrogenase CQZ96_009555 PF08240 Alcohol dehydrogenase GroES-like domain CQZ96_009560 PF14765 Polyketide synthase dehydratase CQZ96_009560 PF00550 Phosphopantetheine attachment site CQZ96_009560 PF08240 Alcohol dehydrogenase GroES-like domain CQZ96_009560 PF00698 Acyl transferase domain CQZ96_009560 PF08659 KR domain CQZ96_009575 PF00009 Elongation factor Tu GTP binding domain CQZ96_009580 PF01507 Phosphoadenosine phosphosulfate reductase family CQZ96_009590 PF14052 Capsule assembly protein Wzi CQZ96_009595 PF01384 Phosphate transporter family CQZ96_009600 PF13018 Extended Signal Peptide of Type V secretion system CQZ96_009600 PF03895 YadA-like membrane anchor domain CQZ96_009600 PF05658 Head domain of trimeric autotransporter adhesin CQZ96_009600 PF05662 Coiled stalk of trimeric autotransporter adhesin CQZ96_009605 PF02965 Vitamin B12 dependent methionine synthase, activation domain CQZ96_009605 PF00809 Pterin binding enzyme CQZ96_009605 PF02574 Homocysteine S-methyltransferase CQZ96_009605 PF02607 B12 binding domain CQZ96_009605 PF02310 B12 binding domain CQZ96_009610 PF13784 Fic/DOC family N-terminal CQZ96_009610 PF02661 Fic/DOC family CQZ96_009620 PF07690 Major Facilitator Superfamily CQZ96_009625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQZ96_009625 PF00529 HlyD membrane-fusion protein of T1SS CQZ96_009630 PF03061 Thioesterase superfamily CQZ96_009635 PF00490 Delta-aminolevulinic acid dehydratase CQZ96_009640 PF01266 FAD dependent oxidoreductase CQZ96_009645 PF00175 Oxidoreductase NAD-binding domain CQZ96_009645 PF00970 Oxidoreductase FAD-binding domain CQZ96_009650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_009650 PF03466 LysR substrate binding domain CQZ96_009670 PF00361 Proton-conducting membrane transporter CQZ96_009675 PF00361 Proton-conducting membrane transporter CQZ96_009680 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CQZ96_009680 PF00361 Proton-conducting membrane transporter CQZ96_009685 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CQZ96_009690 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CQZ96_009695 PF12838 4Fe-4S dicluster domain CQZ96_009700 PF00146 NADH dehydrogenase CQZ96_009705 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CQZ96_009705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CQZ96_009705 PF00384 Molybdopterin oxidoreductase CQZ96_009710 PF10531 SLBB domain CQZ96_009710 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CQZ96_009710 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CQZ96_009720 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CQZ96_009720 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CQZ96_009725 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CQZ96_009730 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CQZ96_009750 PF00672 HAMP domain CQZ96_009750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_009750 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_009755 PF00486 Transcriptional regulatory protein, C terminal CQZ96_009755 PF00072 Response regulator receiver domain CQZ96_009760 PF00317 Ribonucleotide reductase, all-alpha domain CQZ96_009760 PF03477 ATP cone domain CQZ96_009760 PF02867 Ribonucleotide reductase, barrel domain CQZ96_009770 PF00268 Ribonucleotide reductase, small chain CQZ96_009825 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CQZ96_009825 PF06594 Haemolysin-type calcium binding protein related domain CQZ96_009880 PF01613 Flavin reductase like domain CQZ96_009885 PF01717 Cobalamin-independent synthase, Catalytic domain CQZ96_009895 PF02616 Segregation and condensation protein ScpA CQZ96_009900 PF04079 Segregation and condensation complex subunit ScpB CQZ96_009905 PF01479 S4 domain CQZ96_009905 PF00849 RNA pseudouridylate synthase CQZ96_009910 PF00005 ABC transporter CQZ96_009910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQZ96_009915 PF12911 N-terminal TM domain of oligopeptide transport permease C CQZ96_009915 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_009920 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_009930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQZ96_009935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQZ96_009940 PF07715 TonB-dependent Receptor Plug Domain CQZ96_009940 PF00593 TonB dependent receptor CQZ96_009945 PF03544 Gram-negative bacterial TonB protein C-terminal CQZ96_009950 PF01618 MotA/TolQ/ExbB proton channel family CQZ96_009955 PF02472 Biopolymer transport protein ExbD/TolR CQZ96_009960 PF02472 Biopolymer transport protein ExbD/TolR CQZ96_009965 PF00171 Aldehyde dehydrogenase family CQZ96_009970 PF07690 Major Facilitator Superfamily CQZ96_009970 PF00083 Sugar (and other) transporter CQZ96_009975 PF00196 Bacterial regulatory proteins, luxR family CQZ96_009975 PF00072 Response regulator receiver domain CQZ96_009980 PF03831 PhnA domain CQZ96_009980 PF08274 PhnA Zinc-Ribbon CQZ96_009985 PF04343 Protein of unknown function, DUF488 CQZ96_010010 PF10518 TAT (twin-arginine translocation) pathway signal sequence CQZ96_010010 PF00149 Calcineurin-like phosphoesterase CQZ96_010015 PF13091 PLD-like domain CQZ96_010025 PF01926 50S ribosome-binding GTPase CQZ96_010025 PF13167 GTP-binding GTPase N-terminal CQZ96_010025 PF16360 GTP-binding GTPase Middle Region CQZ96_010050 PF00149 Calcineurin-like phosphoesterase CQZ96_010055 PF00398 Ribosomal RNA adenine dimethylase CQZ96_010065 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CQZ96_010075 PF00572 Ribosomal protein L13 CQZ96_010080 PF00380 Ribosomal protein S9/S16 CQZ96_010090 PF00043 Glutathione S-transferase, C-terminal domain CQZ96_010090 PF02798 Glutathione S-transferase, N-terminal domain CQZ96_010095 PF04386 Stringent starvation protein B CQZ96_010115 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_010115 PF05231 MASE1 CQZ96_010115 PF08448 PAS fold CQZ96_010115 PF13426 PAS domain CQZ96_010115 PF08447 PAS fold CQZ96_010115 PF00563 EAL domain CQZ96_010150 PF00694 Aconitase C-terminal domain CQZ96_010150 PF00330 Aconitase family (aconitate hydratase) CQZ96_010185 PF13098 Thioredoxin-like domain CQZ96_010185 PF10411 Disulfide bond isomerase protein N-terminus CQZ96_010200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CQZ96_010205 PF00593 TonB dependent receptor CQZ96_010205 PF07715 TonB-dependent Receptor Plug Domain CQZ96_010215 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CQZ96_010215 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CQZ96_010215 PF06827 Zinc finger found in FPG and IleRS CQZ96_010220 PF00639 PPIC-type PPIASE domain CQZ96_010220 PF09312 SurA N-terminal domain CQZ96_010230 PF01741 Large-conductance mechanosensitive channel, MscL CQZ96_010240 PF00860 Permease family CQZ96_010245 PF05175 Methyltransferase small domain CQZ96_010245 PF08468 Methyltransferase small domain N-terminal CQZ96_010250 PF00324 Amino acid permease CQZ96_010255 PF01139 tRNA-splicing ligase RtcB CQZ96_010265 PF00691 OmpA family CQZ96_010265 PF05736 OprF membrane domain CQZ96_010270 PF00691 OmpA family CQZ96_010270 PF13505 Outer membrane protein beta-barrel domain CQZ96_010280 PF02803 Thiolase, C-terminal domain CQZ96_010280 PF00108 Thiolase, N-terminal domain CQZ96_010290 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CQZ96_010290 PF01367 5'-3' exonuclease, C-terminal SAM fold CQZ96_010290 PF00476 DNA polymerase family A CQZ96_010290 PF01612 3'-5' exonuclease CQZ96_010300 PF02325 YGGT family CQZ96_010305 PF03807 NADP oxidoreductase coenzyme F420-dependent CQZ96_010305 PF14748 Pyrroline-5-carboxylate reductase dimerisation CQZ96_010310 PF01171 PP-loop family CQZ96_010310 PF09179 TilS substrate binding domain CQZ96_010310 PF11734 TilS substrate C-terminal domain CQZ96_010315 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CQZ96_010320 PF02541 Ppx/GppA phosphatase family CQZ96_010325 PF00085 Thioredoxin CQZ96_010330 PF07498 Rho termination factor, N-terminal domain CQZ96_010330 PF07497 Rho termination factor, RNA-binding domain CQZ96_010330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQZ96_010340 PF00216 Bacterial DNA-binding protein CQZ96_010345 PF03147 Ferredoxin-fold anticodon binding domain CQZ96_010345 PF03483 B3/4 domain CQZ96_010345 PF01588 Putative tRNA binding domain CQZ96_010345 PF03484 tRNA synthetase B5 domain CQZ96_010345 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CQZ96_010350 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CQZ96_010350 PF01409 tRNA synthetases class II core domain (F) CQZ96_010385 PF00453 Ribosomal protein L20 CQZ96_010390 PF01632 Ribosomal protein L35 CQZ96_010405 PF09335 SNARE associated Golgi protein CQZ96_010420 PF02798 Glutathione S-transferase, N-terminal domain CQZ96_010420 PF00043 Glutathione S-transferase, C-terminal domain CQZ96_010430 PF00707 Translation initiation factor IF-3, C-terminal domain CQZ96_010430 PF05198 Translation initiation factor IF-3, N-terminal domain CQZ96_010435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CQZ96_010435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CQZ96_010435 PF03129 Anticodon binding domain CQZ96_010435 PF02824 TGS domain CQZ96_010445 PF04030 D-arabinono-1,4-lactone oxidase CQZ96_010445 PF01565 FAD binding domain CQZ96_010450 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal CQZ96_010450 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal CQZ96_010455 PF12833 Helix-turn-helix domain CQZ96_010455 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CQZ96_010460 PF00501 AMP-binding enzyme CQZ96_010460 PF13193 AMP-binding enzyme C-terminal domain CQZ96_010470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_010470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_010470 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_010470 PF12806 Acetyl-CoA dehydrogenase C-terminal like CQZ96_010475 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_010475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_010475 PF12806 Acetyl-CoA dehydrogenase C-terminal like CQZ96_010475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_010515 PF00593 TonB dependent receptor CQZ96_010515 PF07715 TonB-dependent Receptor Plug Domain CQZ96_010525 PF01336 OB-fold nucleic acid binding domain CQZ96_010525 PF00152 tRNA synthetases class II (D, K and N) CQZ96_010525 PF02938 GAD domain CQZ96_010550 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CQZ96_010555 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CQZ96_010570 PF11380 Stealth protein CR2, conserved region 2 CQZ96_010570 PF17102 Stealth protein CR3, conserved region 3 CQZ96_010570 PF17103 Stealth protein CR4, conserved region 4 CQZ96_010570 PF17101 Stealth protein CR1, conserved region 1 CQZ96_010580 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CQZ96_010580 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CQZ96_010580 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CQZ96_010585 PF01370 NAD dependent epimerase/dehydratase family CQZ96_010590 PF01063 Amino-transferase class IV CQZ96_010595 PF08335 GlnD PII-uridylyltransferase CQZ96_010595 PF03710 Glutamate-ammonia ligase adenylyltransferase CQZ96_010600 PF00672 HAMP domain CQZ96_010600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_010600 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_010615 PF02547 Queuosine biosynthesis protein CQZ96_010635 PF04973 Nicotinamide mononucleotide transporter CQZ96_010650 PF01702 Queuine tRNA-ribosyltransferase CQZ96_010655 PF02699 Preprotein translocase subunit CQZ96_010660 PF13721 SecD export protein N-terminal TM region CQZ96_010660 PF02355 Protein export membrane protein CQZ96_010660 PF07549 SecD/SecF GG Motif CQZ96_010665 PF07549 SecD/SecF GG Motif CQZ96_010665 PF02355 Protein export membrane protein CQZ96_010675 PF02233 NAD(P) transhydrogenase beta subunit CQZ96_010680 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CQZ96_010685 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CQZ96_010685 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CQZ96_010695 PF02016 LD-carboxypeptidase N-terminal domain CQZ96_010695 PF17676 LD-carboxypeptidase C-terminal domain CQZ96_010705 PF07690 Major Facilitator Superfamily CQZ96_010720 PF00924 Mechanosensitive ion channel CQZ96_010735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_010735 PF03466 LysR substrate binding domain CQZ96_010750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_010750 PF03466 LysR substrate binding domain CQZ96_010780 PF01207 Dihydrouridine synthase (Dus) CQZ96_010785 PF03466 LysR substrate binding domain CQZ96_010785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_010805 PF00899 ThiF family CQZ96_010810 PF00694 Aconitase C-terminal domain CQZ96_010810 PF00330 Aconitase family (aconitate hydratase) CQZ96_010815 PF01026 TatD related DNase CQZ96_010830 PF03144 Elongation factor Tu domain 2 CQZ96_010830 PF16658 Class II release factor RF3, C-terminal domain CQZ96_010830 PF00009 Elongation factor Tu GTP binding domain CQZ96_010835 PF03707 Bacterial signalling protein N terminal repeat CQZ96_010835 PF00563 EAL domain CQZ96_010835 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_010840 PF03572 Peptidase family S41 CQZ96_010840 PF11818 C-terminal domain of tail specific protease (DUF3340) CQZ96_010840 PF17804 Tail specific protease N-terminal domain CQZ96_010840 PF00595 PDZ domain CQZ96_010845 PF00933 Glycosyl hydrolase family 3 N terminal domain CQZ96_010860 PF00171 Aldehyde dehydrogenase family CQZ96_010865 PF00871 Acetokinase family CQZ96_010870 PF07085 DRTGG domain CQZ96_010870 PF01515 Phosphate acetyl/butaryl transferase CQZ96_010875 PF07715 TonB-dependent Receptor Plug Domain CQZ96_010875 PF00593 TonB dependent receptor CQZ96_010885 PF05681 Fumarate hydratase (Fumerase) CQZ96_010885 PF05683 Fumarase C-terminus CQZ96_010910 PF07724 AAA domain (Cdc48 subfamily) CQZ96_010910 PF10431 C-terminal, D2-small domain, of ClpB protein CQZ96_010910 PF06689 ClpX C4-type zinc finger CQZ96_010915 PF00574 Clp protease CQZ96_010920 PF05698 Bacterial trigger factor protein (TF) C-terminus CQZ96_010920 PF05697 Bacterial trigger factor protein (TF) CQZ96_010920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CQZ96_010925 PF00593 TonB dependent receptor CQZ96_010925 PF07715 TonB-dependent Receptor Plug Domain CQZ96_010930 PF00593 TonB dependent receptor CQZ96_010930 PF07715 TonB-dependent Receptor Plug Domain CQZ96_010935 PF13640 2OG-Fe(II) oxygenase superfamily CQZ96_010935 PF18331 PKHD-type hydroxylase C-terminal domain CQZ96_010940 PF01070 FMN-dependent dehydrogenase CQZ96_010945 PF08502 LeuA allosteric (dimerisation) domain CQZ96_010945 PF00682 HMGL-like CQZ96_010950 PF00561 alpha/beta hydrolase fold CQZ96_010955 PF00561 alpha/beta hydrolase fold CQZ96_010955 PF07021 Methionine biosynthesis protein MetW CQZ96_010975 PF01725 Ham1 family CQZ96_010985 PF02416 mttA/Hcf106 family CQZ96_010990 PF02416 mttA/Hcf106 family CQZ96_010995 PF00902 Sec-independent protein translocase protein (TatC) CQZ96_011010 PF01790 Prolipoprotein diacylglyceryl transferase CQZ96_011030 PF09234 Domain of unknown function (DUF1963) CQZ96_011035 PF00303 Thymidylate synthase CQZ96_011040 PF00186 Dihydrofolate reductase CQZ96_011060 PF00403 Heavy-metal-associated domain CQZ96_011060 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_011060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQZ96_011095 PF01066 CDP-alcohol phosphatidyltransferase CQZ96_011100 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CQZ96_011120 PF00056 lactate/malate dehydrogenase, NAD binding domain CQZ96_011120 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CQZ96_011130 PF01551 Peptidase family M23 CQZ96_011130 PF10145 Phage-related minor tail protein CQZ96_011130 PF01464 Transglycosylase SLT domain CQZ96_011135 PF00919 Uncharacterized protein family UPF0004 CQZ96_011135 PF04055 Radical SAM superfamily CQZ96_011135 PF01938 TRAM domain CQZ96_011140 PF02562 PhoH-like protein CQZ96_011145 PF02130 Uncharacterized protein family UPF0054 CQZ96_011150 PF02811 PHP domain CQZ96_011155 PF04279 Intracellular septation protein A CQZ96_011160 PF03795 YCII-related domain CQZ96_011170 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CQZ96_011170 PF01266 FAD dependent oxidoreductase CQZ96_011175 PF00581 Rhodanese-like domain CQZ96_011180 PF04461 Protein of unknown function (DUF520) CQZ96_011195 PF03061 Thioesterase superfamily CQZ96_011200 PF00085 Thioredoxin CQZ96_011210 PF00753 Metallo-beta-lactamase superfamily CQZ96_011210 PF04273 Putative phosphatase (DUF442) CQZ96_011215 PF01625 Peptide methionine sulfoxide reductase CQZ96_011225 PF01618 MotA/TolQ/ExbB proton channel family CQZ96_011235 PF00551 Formyl transferase CQZ96_011235 PF01842 ACT domain CQZ96_011240 PF00440 Bacterial regulatory proteins, tetR family CQZ96_011240 PF08360 QacR-like protein, C-terminal region CQZ96_011245 PF00171 Aldehyde dehydrogenase family CQZ96_011250 PF00830 Ribosomal L28 family CQZ96_011255 PF00471 Ribosomal protein L33 CQZ96_011260 PF00999 Sodium/hydrogen exchanger family CQZ96_011260 PF02254 TrkA-N domain CQZ96_011280 PF00580 UvrD/REP helicase N-terminal domain CQZ96_011280 PF13361 UvrD-like helicase C-terminal domain CQZ96_011285 PF02595 Glycerate kinase family CQZ96_011305 PF08272 Topoisomerase I zinc-ribbon-like CQZ96_011305 PF01751 Toprim domain CQZ96_011305 PF01396 Topoisomerase DNA binding C4 zinc finger CQZ96_011305 PF01131 DNA topoisomerase CQZ96_011315 PF01638 HxlR-like helix-turn-helix CQZ96_011330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQZ96_011330 PF02785 Biotin carboxylase C-terminal domain CQZ96_011330 PF00289 Biotin carboxylase, N-terminal domain CQZ96_011330 PF00364 Biotin-requiring enzyme CQZ96_011335 PF02626 Carboxyltransferase domain, subdomain A and B CQZ96_011340 PF07286 Protein of unknown function (DUF1445) CQZ96_011345 PF03746 LamB/YcsF family CQZ96_011350 PF01566 Natural resistance-associated macrophage protein CQZ96_011355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_011360 PF04102 SlyX CQZ96_011380 PF01661 Macro domain CQZ96_011385 PF03279 Bacterial lipid A biosynthesis acyltransferase CQZ96_011405 PF02774 Semialdehyde dehydrogenase, dimerisation domain CQZ96_011405 PF01118 Semialdehyde dehydrogenase, NAD binding domain CQZ96_011420 PF00710 Asparaginase, N-terminal CQZ96_011420 PF17763 Glutaminase/Asparaginase C-terminal domain CQZ96_011425 PF01416 tRNA pseudouridine synthase CQZ96_011435 PF01176 Translation initiation factor 1A / IF-1 CQZ96_011445 PF00180 Isocitrate/isopropylmalate dehydrogenase CQZ96_011455 PF00694 Aconitase C-terminal domain CQZ96_011460 PF00330 Aconitase family (aconitate hydratase) CQZ96_011475 PF03466 LysR substrate binding domain CQZ96_011475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_011490 PF00293 NUDIX domain CQZ96_011495 PF05524 PEP-utilising enzyme, N-terminal CQZ96_011495 PF01590 GAF domain CQZ96_011495 PF02896 PEP-utilising enzyme, TIM barrel domain CQZ96_011495 PF00391 PEP-utilising enzyme, mobile domain CQZ96_011510 PF18158 Adaptive response protein AidB N-terminal domain CQZ96_011510 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_011510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_011540 PF00199 Catalase CQZ96_011540 PF06628 Catalase-related immune-responsive CQZ96_011565 PF12706 Beta-lactamase superfamily domain CQZ96_011570 PF01545 Cation efflux family CQZ96_011570 PF16916 Dimerisation domain of Zinc Transporter CQZ96_011580 PF03466 LysR substrate binding domain CQZ96_011580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_011595 PF08279 HTH domain CQZ96_011595 PF13280 WYL domain CQZ96_011600 PF13419 Haloacid dehalogenase-like hydrolase CQZ96_011605 PF01479 S4 domain CQZ96_011605 PF00849 RNA pseudouridylate synthase CQZ96_011610 PF10150 Ribonuclease E/G family CQZ96_011610 PF00575 S1 RNA binding domain CQZ96_011610 PF12111 Polyribonucleotide phosphorylase C terminal CQZ96_011615 PF13193 AMP-binding enzyme C-terminal domain CQZ96_011615 PF00501 AMP-binding enzyme CQZ96_011640 PF00732 GMC oxidoreductase CQZ96_011640 PF05199 GMC oxidoreductase CQZ96_011655 PF04024 PspC domain CQZ96_011660 PF00571 CBS domain CQZ96_011675 PF01565 FAD binding domain CQZ96_011695 PF02091 Glycyl-tRNA synthetase alpha subunit CQZ96_011700 PF02092 Glycyl-tRNA synthetase beta subunit CQZ96_011700 PF05746 DALR anticodon binding domain CQZ96_011735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQZ96_011735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQZ96_011760 PF08241 Methyltransferase domain CQZ96_011780 PF01209 ubiE/COQ5 methyltransferase family CQZ96_011795 PF01594 AI-2E family transporter CQZ96_011800 PF00080 Copper/zinc superoxide dismutase (SODC) CQZ96_011810 PF12805 FUSC-like inner membrane protein yccS CQZ96_011820 PF12823 Domain of unknown function (DUF3817) CQZ96_011825 PF07690 Major Facilitator Superfamily CQZ96_011835 PF05726 Pirin C-terminal cupin domain CQZ96_011835 PF02678 Pirin CQZ96_011855 PF01565 FAD binding domain CQZ96_011855 PF02913 FAD linked oxidases, C-terminal domain CQZ96_011860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQZ96_011860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQZ96_011865 PF00892 EamA-like transporter family CQZ96_011870 PF08453 Peptidase family M9 N-terminal CQZ96_011870 PF01752 Collagenase CQZ96_011870 PF18496 Collagenase G catalytic helper subdomain CQZ96_011875 PF00149 Calcineurin-like phosphoesterase CQZ96_011885 PF00892 EamA-like transporter family CQZ96_011895 PF01925 Sulfite exporter TauE/SafE CQZ96_011900 PF09157 Pseudouridine synthase II TruB, C-terminal CQZ96_011900 PF01509 TruB family pseudouridylate synthase (N terminal domain) CQZ96_011900 PF16198 tRNA pseudouridylate synthase B C-terminal domain CQZ96_011905 PF03280 Proteobacterial lipase chaperone protein CQZ96_011910 PF00561 alpha/beta hydrolase fold CQZ96_011915 PF00561 alpha/beta hydrolase fold CQZ96_011920 PF01245 Ribosomal protein L19 CQZ96_011925 PF01746 tRNA (Guanine-1)-methyltransferase CQZ96_011930 PF05239 PRC-barrel domain CQZ96_011930 PF01782 RimM N-terminal domain CQZ96_011935 PF00886 Ribosomal protein S16 CQZ96_011940 PF07963 Prokaryotic N-terminal methylation motif CQZ96_011940 PF00114 Pilin (bacterial filament) CQZ96_011970 PF07963 Prokaryotic N-terminal methylation motif CQZ96_011970 PF00114 Pilin (bacterial filament) CQZ96_011975 PF02401 LytB protein CQZ96_011980 PF00625 Guanylate kinase CQZ96_011985 PF01192 RNA polymerase Rpb6 CQZ96_011990 PF13291 ACT domain CQZ96_011990 PF04607 Region found in RelA / SpoT proteins CQZ96_011990 PF02824 TGS domain CQZ96_011995 PF01042 Endoribonuclease L-PSP CQZ96_012000 PF04324 BFD-like [2Fe-2S] binding domain CQZ96_012005 PF00210 Ferritin-like domain CQZ96_012010 PF11846 Virulence factor membrane-bound polymerase, C-terminal CQZ96_012010 PF15864 Protein glycosylation ligase CQZ96_012010 PF04932 O-Antigen ligase CQZ96_012015 PF00114 Pilin (bacterial filament) CQZ96_012015 PF07963 Prokaryotic N-terminal methylation motif CQZ96_012020 PF04932 O-Antigen ligase CQZ96_012020 PF11846 Virulence factor membrane-bound polymerase, C-terminal CQZ96_012020 PF15864 Protein glycosylation ligase CQZ96_012025 PF07963 Prokaryotic N-terminal methylation motif CQZ96_012025 PF00114 Pilin (bacterial filament) CQZ96_012035 PF04536 TPM domain CQZ96_012040 PF04011 LemA family CQZ96_012050 PF02033 Ribosome-binding factor A CQZ96_012055 PF04760 Translation initiation factor IF-2, N-terminal region CQZ96_012055 PF11987 Translation-initiation factor 2 CQZ96_012055 PF08364 Bacterial translation initiation factor IF-2 associated region CQZ96_012055 PF00009 Elongation factor Tu GTP binding domain CQZ96_012060 PF00575 S1 RNA binding domain CQZ96_012060 PF08529 NusA N-terminal domain CQZ96_012060 PF13184 NusA-like KH domain CQZ96_012065 PF17384 RimP C-terminal SH3 domain CQZ96_012065 PF02576 RimP N-terminal domain CQZ96_012090 PF03840 Preprotein translocase SecG subunit CQZ96_012095 PF00121 Triosephosphate isomerase CQZ96_012100 PF00437 Type II/IV secretion system protein CQZ96_012100 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CQZ96_012105 PF00482 Type II secretion system (T2SS), protein F CQZ96_012110 PF01478 Type IV leader peptidase family CQZ96_012110 PF06750 Bacterial Peptidase A24 N-terminal domain CQZ96_012115 PF01121 Dephospho-CoA kinase CQZ96_012125 PF08032 RNA 2'-O ribose methyltransferase substrate binding CQZ96_012125 PF00588 SpoU rRNA Methylase family CQZ96_012130 PF06865 Pyrimidine/purine nucleoside phosphorylase CQZ96_012135 PF02463 RecF/RecN/SMC N terminal domain CQZ96_012140 PF02622 Uncharacterized ACR, COG1678 CQZ96_012145 PF03652 Holliday junction resolvase CQZ96_012155 PF13533 Biotin-lipoyl like CQZ96_012165 PF04632 Fusaric acid resistance protein family CQZ96_012175 PF02525 Flavodoxin-like fold CQZ96_012185 PF00664 ABC transporter transmembrane region CQZ96_012185 PF00005 ABC transporter CQZ96_012195 PF07664 Ferrous iron transport protein B C terminus CQZ96_012195 PF02421 Ferrous iron transport protein B CQZ96_012195 PF07670 Nucleoside recognition CQZ96_012205 PF02899 Phage integrase, N-terminal SAM-like domain CQZ96_012205 PF00589 Phage integrase family CQZ96_012210 PF10411 Disulfide bond isomerase protein N-terminus CQZ96_012210 PF13098 Thioredoxin-like domain CQZ96_012215 PF01842 ACT domain CQZ96_012215 PF00742 Homoserine dehydrogenase CQZ96_012215 PF03447 Homoserine dehydrogenase, NAD binding domain CQZ96_012220 PF00291 Pyridoxal-phosphate dependent enzyme CQZ96_012225 PF00768 D-alanyl-D-alanine carboxypeptidase CQZ96_012230 PF00072 Response regulator receiver domain CQZ96_012230 PF00196 Bacterial regulatory proteins, luxR family CQZ96_012235 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_012235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_012240 PF00158 Sigma-54 interaction domain CQZ96_012240 PF00072 Response regulator receiver domain CQZ96_012240 PF02954 Bacterial regulatory protein, Fis family CQZ96_012245 PF00595 PDZ domain CQZ96_012245 PF03572 Peptidase family S41 CQZ96_012250 PF01676 Metalloenzyme superfamily CQZ96_012250 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CQZ96_012255 PF03739 Lipopolysaccharide export system permease LptF/LptG CQZ96_012260 PF03739 Lipopolysaccharide export system permease LptF/LptG CQZ96_012265 PF00883 Cytosol aminopeptidase family, catalytic domain CQZ96_012265 PF02789 Cytosol aminopeptidase family, N-terminal domain CQZ96_012290 PF01066 CDP-alcohol phosphatidyltransferase CQZ96_012300 PF01541 GIY-YIG catalytic domain CQZ96_012300 PF02151 UvrB/uvrC motif CQZ96_012300 PF08459 UvrC Helix-hairpin-helix N-terminal CQZ96_012315 PF08000 Bacterial PH domain CQZ96_012315 PF11724 YvbH-like oligomerisation region CQZ96_012330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQZ96_012330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQZ96_012330 PF00378 Enoyl-CoA hydratase/isomerase CQZ96_012335 PF00108 Thiolase, N-terminal domain CQZ96_012335 PF02803 Thiolase, C-terminal domain CQZ96_012345 PF00376 MerR family regulatory protein CQZ96_012345 PF09278 MerR, DNA binding CQZ96_012360 PF01323 DSBA-like thioredoxin domain CQZ96_012375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_012375 PF00183 Hsp90 protein CQZ96_012390 PF13726 Na+-H+ antiporter family CQZ96_012390 PF03553 Na+/H+ antiporter family CQZ96_012395 PF00561 alpha/beta hydrolase fold CQZ96_012415 PF00623 RNA polymerase Rpb1, domain 2 CQZ96_012415 PF04998 RNA polymerase Rpb1, domain 5 CQZ96_012415 PF04997 RNA polymerase Rpb1, domain 1 CQZ96_012415 PF04983 RNA polymerase Rpb1, domain 3 CQZ96_012415 PF05000 RNA polymerase Rpb1, domain 4 CQZ96_012420 PF04565 RNA polymerase Rpb2, domain 3 CQZ96_012420 PF10385 RNA polymerase beta subunit external 1 domain CQZ96_012420 PF04560 RNA polymerase Rpb2, domain 7 CQZ96_012420 PF00562 RNA polymerase Rpb2, domain 6 CQZ96_012420 PF04561 RNA polymerase Rpb2, domain 2 CQZ96_012420 PF04563 RNA polymerase beta subunit CQZ96_012425 PF00542 Ribosomal protein L7/L12 C-terminal domain CQZ96_012425 PF16320 Ribosomal protein L7/L12 dimerisation domain CQZ96_012430 PF00466 Ribosomal protein L10 CQZ96_012435 PF00687 Ribosomal protein L1p/L10e family CQZ96_012440 PF03946 Ribosomal protein L11, N-terminal domain CQZ96_012440 PF00298 Ribosomal protein L11, RNA binding domain CQZ96_012445 PF02357 Transcription termination factor nusG CQZ96_012445 PF00467 KOW motif CQZ96_012450 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CQZ96_012460 PF00009 Elongation factor Tu GTP binding domain CQZ96_012460 PF03143 Elongation factor Tu C-terminal domain CQZ96_012460 PF03144 Elongation factor Tu domain 2 CQZ96_012485 PF00425 chorismate binding enzyme CQZ96_012485 PF04715 Anthranilate synthase component I, N terminal region CQZ96_012490 PF13419 Haloacid dehalogenase-like hydrolase CQZ96_012495 PF16697 Inner membrane component of T3SS, cytoplasmic domain CQZ96_012500 PF00263 Bacterial type II and III secretion system protein CQZ96_012500 PF03958 Bacterial type II/III secretion system short domain CQZ96_012515 PF00816 H-NS histone family CQZ96_012540 PF03900 Porphobilinogen deaminase, C-terminal domain CQZ96_012540 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CQZ96_012545 PF04397 LytTr DNA-binding domain CQZ96_012545 PF00072 Response regulator receiver domain CQZ96_012550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_012550 PF07694 5TMR of 5TMR-LYT CQZ96_012550 PF06580 Histidine kinase CQZ96_012555 PF14698 Argininosuccinate lyase C-terminal CQZ96_012555 PF00206 Lyase CQZ96_012560 PF04362 Bacterial Fe(2+) trafficking CQZ96_012570 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CQZ96_012570 PF12833 Helix-turn-helix domain CQZ96_012575 PF00230 Major intrinsic protein CQZ96_012590 PF02705 K+ potassium transporter CQZ96_012620 PF02661 Fic/DOC family CQZ96_012620 PF13784 Fic/DOC family N-terminal CQZ96_012645 PF01593 Flavin containing amine oxidoreductase CQZ96_012650 PF05726 Pirin C-terminal cupin domain CQZ96_012650 PF02678 Pirin CQZ96_012655 PF00857 Isochorismatase family CQZ96_012660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_012660 PF03466 LysR substrate binding domain CQZ96_012665 PF10417 C-terminal domain of 1-Cys peroxiredoxin CQZ96_012665 PF00578 AhpC/TSA family CQZ96_012685 PF00436 Single-strand binding protein family CQZ96_012690 PF07690 Major Facilitator Superfamily CQZ96_012700 PF02581 Thiamine monophosphate synthase CQZ96_012700 PF08543 Phosphomethylpyrimidine kinase CQZ96_012700 PF03070 TENA/THI-4/PQQC family CQZ96_012710 PF07690 Major Facilitator Superfamily CQZ96_012720 PF00817 impB/mucB/samB family CQZ96_012720 PF11799 impB/mucB/samB family C-terminal domain CQZ96_012720 PF11798 IMS family HHH motif CQZ96_012725 PF00561 alpha/beta hydrolase fold CQZ96_012745 PF02678 Pirin CQZ96_012745 PF05726 Pirin C-terminal cupin domain CQZ96_012775 PF17768 RecJ OB domain CQZ96_012775 PF01368 DHH family CQZ96_012775 PF02272 DHHA1 domain CQZ96_012780 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CQZ96_012780 PF01243 Pyridoxamine 5'-phosphate oxidase CQZ96_012785 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CQZ96_012785 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CQZ96_012785 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CQZ96_012785 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CQZ96_012790 PF00571 CBS domain CQZ96_012790 PF00478 IMP dehydrogenase / GMP reductase domain CQZ96_012795 PF03692 Putative zinc- or iron-chelating domain CQZ96_012800 PF01613 Flavin reductase like domain CQZ96_012800 PF00258 Flavodoxin CQZ96_012805 PF01169 Uncharacterized protein family UPF0016 CQZ96_012810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQZ96_012810 PF00364 Biotin-requiring enzyme CQZ96_012810 PF02817 e3 binding domain CQZ96_012815 PF17831 Pyruvate dehydrogenase E1 component middle domain CQZ96_012815 PF00456 Transketolase, thiamine diphosphate binding domain CQZ96_012830 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CQZ96_012835 PF12327 FtsZ family, C-terminal domain CQZ96_012835 PF00091 Tubulin/FtsZ family, GTPase domain CQZ96_012840 PF02491 SHS2 domain inserted in FTSA CQZ96_012845 PF08478 POTRA domain, FtsQ-type CQZ96_012845 PF03799 Cell division protein FtsQ CQZ96_012850 PF01820 D-ala D-ala ligase N-terminus CQZ96_012850 PF07478 D-ala D-ala ligase C-terminus CQZ96_012855 PF01225 Mur ligase family, catalytic domain CQZ96_012855 PF02875 Mur ligase family, glutamate ligase domain CQZ96_012855 PF08245 Mur ligase middle domain CQZ96_012860 PF04101 Glycosyltransferase family 28 C-terminal domain CQZ96_012860 PF03033 Glycosyltransferase family 28 N-terminal domain CQZ96_012865 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CQZ96_012865 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CQZ96_012875 PF01209 ubiE/COQ5 methyltransferase family CQZ96_012880 PF04294 VanW like protein CQZ96_012890 PF00156 Phosphoribosyl transferase domain CQZ96_012895 PF03372 Endonuclease/Exonuclease/phosphatase family CQZ96_012900 PF03960 ArsC family CQZ96_012910 PF07859 alpha/beta hydrolase fold CQZ96_012915 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_012920 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_012920 PF17158 Membrane-associated sensor, integral membrane domain CQZ96_012960 PF00005 ABC transporter CQZ96_012965 PF00005 ABC transporter CQZ96_012965 PF12399 Branched-chain amino acid ATP-binding cassette transporter CQZ96_012975 PF02653 Branched-chain amino acid transport system / permease component CQZ96_012985 PF00204 DNA gyrase B CQZ96_012985 PF00986 DNA gyrase B subunit, carboxyl terminus CQZ96_012985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_012985 PF01751 Toprim domain CQZ96_012990 PF05728 Uncharacterised protein family (UPF0227) CQZ96_013005 PF02600 Disulfide bond formation protein DsbB CQZ96_013010 PF04262 Glutamate-cysteine ligase CQZ96_013020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CQZ96_013020 PF01872 RibD C-terminal domain CQZ96_013030 PF04286 Protein of unknown function (DUF445) CQZ96_013050 PF00155 Aminotransferase class I and II CQZ96_013055 PF01554 MatE CQZ96_013060 PF00106 short chain dehydrogenase CQZ96_013070 PF00072 Response regulator receiver domain CQZ96_013070 PF00486 Transcriptional regulatory protein, C terminal CQZ96_013075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_013075 PF00989 PAS fold CQZ96_013075 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_013075 PF11808 Phosphate regulon sensor protein PhoR CQZ96_013085 PF02666 Phosphatidylserine decarboxylase CQZ96_013090 PF00581 Rhodanese-like domain CQZ96_013095 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CQZ96_013095 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CQZ96_013100 PF02580 D-Tyr-tRNA(Tyr) deacylase CQZ96_013125 PF00925 GTP cyclohydrolase II CQZ96_013125 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CQZ96_013130 PF00885 6,7-dimethyl-8-ribityllumazine synthase CQZ96_013135 PF01029 NusB family CQZ96_013140 PF02769 AIR synthase related protein, C-terminal domain CQZ96_013140 PF00586 AIR synthase related protein, N-terminal domain CQZ96_013145 PF04608 Phosphatidylglycerophosphatase A CQZ96_013150 PF00132 Bacterial transferase hexapeptide (six repeats) CQZ96_013150 PF12804 MobA-like NTP transferase domain CQZ96_013150 PF14602 Hexapeptide repeat of succinyl-transferase CQZ96_013155 PF01380 SIS domain CQZ96_013160 PF01545 Cation efflux family CQZ96_013165 PF01022 Bacterial regulatory protein, arsR family CQZ96_013180 PF04463 Protein of unknown function (DUF523) CQZ96_013185 PF01758 Sodium Bile acid symporter family CQZ96_013190 PF00857 Isochorismatase family CQZ96_013195 PF00701 Dihydrodipicolinate synthetase family CQZ96_013205 PF01259 SAICAR synthetase CQZ96_013220 PF00593 TonB dependent receptor CQZ96_013220 PF07715 TonB-dependent Receptor Plug Domain CQZ96_013230 PF03009 Glycerophosphoryl diester phosphodiesterase family CQZ96_013235 PF12002 MgsA AAA+ ATPase C terminal CQZ96_013235 PF00004 ATPase family associated with various cellular activities (AAA) CQZ96_013235 PF16193 AAA C-terminal domain CQZ96_013240 PF00756 Putative esterase CQZ96_013245 PF03692 Putative zinc- or iron-chelating domain CQZ96_013250 PF07043 Protein of unknown function (DUF1328) CQZ96_013265 PF10576 Iron-sulfur binding domain of endonuclease III CQZ96_013265 PF14815 NUDIX domain CQZ96_013265 PF00730 HhH-GPD superfamily base excision DNA repair protein CQZ96_013265 PF00633 Helix-hairpin-helix motif CQZ96_013280 PF03352 Methyladenine glycosylase CQZ96_013285 PF08240 Alcohol dehydrogenase GroES-like domain CQZ96_013285 PF00107 Zinc-binding dehydrogenase CQZ96_013300 PF03466 LysR substrate binding domain CQZ96_013300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_013305 PF00248 Aldo/keto reductase family CQZ96_013310 PF07690 Major Facilitator Superfamily CQZ96_013320 PF01113 Dihydrodipicolinate reductase, N-terminus CQZ96_013320 PF05173 Dihydrodipicolinate reductase, C-terminus CQZ96_013335 PF01556 DnaJ C terminal domain CQZ96_013335 PF00684 DnaJ central domain CQZ96_013335 PF00226 DnaJ domain CQZ96_013345 PF00873 AcrB/AcrD/AcrF family CQZ96_013350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQZ96_013355 PF00440 Bacterial regulatory proteins, tetR family CQZ96_013360 PF00311 Phosphoenolpyruvate carboxylase CQZ96_013385 PF00860 Permease family CQZ96_013400 PF01687 Riboflavin kinase CQZ96_013400 PF06574 FAD synthetase CQZ96_013405 PF08264 Anticodon-binding domain of tRNA CQZ96_013405 PF00133 tRNA synthetases class I (I, L, M and V) CQZ96_013405 PF06827 Zinc finger found in FPG and IleRS CQZ96_013410 PF01252 Signal peptidase (SPase) II CQZ96_013415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CQZ96_013420 PF01177 Asp/Glu/Hydantoin racemase CQZ96_013435 PF00120 Glutamine synthetase, catalytic domain CQZ96_013455 PF00920 Dehydratase family CQZ96_013465 PF01389 OmpA-like transmembrane domain CQZ96_013465 PF00691 OmpA family CQZ96_013470 PF03895 YadA-like membrane anchor domain CQZ96_013470 PF13018 Extended Signal Peptide of Type V secretion system CQZ96_013470 PF13018 Extended Signal Peptide of Type V secretion system CQZ96_013470 PF13018 Extended Signal Peptide of Type V secretion system CQZ96_013470 PF05662 Coiled stalk of trimeric autotransporter adhesin CQZ96_013470 PF05662 Coiled stalk of trimeric autotransporter adhesin CQZ96_013470 PF05658 Head domain of trimeric autotransporter adhesin CQZ96_013470 PF05658 Head domain of trimeric autotransporter adhesin CQZ96_013470 PF03895 YadA-like membrane anchor domain CQZ96_013470 PF05662 Coiled stalk of trimeric autotransporter adhesin CQZ96_013470 PF05658 Head domain of trimeric autotransporter adhesin CQZ96_013470 PF03895 YadA-like membrane anchor domain CQZ96_013475 PF00551 Formyl transferase CQZ96_013475 PF02911 Formyl transferase, C-terminal domain CQZ96_013480 PF01189 16S rRNA methyltransferase RsmB/F CQZ96_013480 PF01029 NusB family CQZ96_013490 PF00209 Sodium:neurotransmitter symporter family CQZ96_013495 PF06940 Domain of unknown function (DUF1287) CQZ96_013500 PF00171 Aldehyde dehydrogenase family CQZ96_013540 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CQZ96_013545 PF07859 alpha/beta hydrolase fold CQZ96_013560 PF01521 Iron-sulphur cluster biosynthesis CQZ96_013565 PF00561 alpha/beta hydrolase fold CQZ96_013570 PF03702 Anhydro-N-acetylmuramic acid kinase CQZ96_013575 PF00579 tRNA synthetases class I (W and Y) CQZ96_013585 PF12848 ABC transporter CQZ96_013585 PF00005 ABC transporter CQZ96_013595 PF00986 DNA gyrase B subunit, carboxyl terminus CQZ96_013595 PF00204 DNA gyrase B CQZ96_013595 PF01751 Toprim domain CQZ96_013595 PF18053 DNA gyrase B subunit insert domain CQZ96_013595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_013600 PF02463 RecF/RecN/SMC N terminal domain CQZ96_013605 PF02767 DNA polymerase III beta subunit, central domain CQZ96_013605 PF00712 DNA polymerase III beta subunit, N-terminal domain CQZ96_013605 PF02768 DNA polymerase III beta subunit, C-terminal domain CQZ96_013610 PF00308 Bacterial dnaA protein CQZ96_013610 PF08299 Bacterial dnaA protein helix-turn-helix CQZ96_013610 PF11638 DnaA N-terminal domain CQZ96_013615 PF00468 Ribosomal protein L34 CQZ96_013620 PF00825 Ribonuclease P CQZ96_013625 PF01809 Putative membrane protein insertion efficiency factor CQZ96_013630 PF14849 YidC periplasmic domain CQZ96_013630 PF02096 60Kd inner membrane protein CQZ96_013635 PF10396 GTP-binding protein TrmE N-terminus CQZ96_013635 PF01926 50S ribosome-binding GTPase CQZ96_013635 PF12631 MnmE helical domain CQZ96_013650 PF02583 Metal-sensitive transcriptional repressor CQZ96_013655 PF01545 Cation efflux family CQZ96_013660 PF13098 Thioredoxin-like domain CQZ96_013660 PF10411 Disulfide bond isomerase protein N-terminus CQZ96_013665 PF04226 Transglycosylase associated protein CQZ96_013670 PF00156 Phosphoribosyl transferase domain CQZ96_013675 PF01979 Amidohydrolase family CQZ96_013685 PF03741 Integral membrane protein TerC family CQZ96_013695 PF07690 Major Facilitator Superfamily CQZ96_013700 PF14542 GCN5-related N-acetyl-transferase CQZ96_013705 PF14542 GCN5-related N-acetyl-transferase CQZ96_013715 PF08245 Mur ligase middle domain CQZ96_013715 PF02875 Mur ligase family, glutamate ligase domain CQZ96_013715 PF01225 Mur ligase family, catalytic domain CQZ96_013730 PF00731 AIR carboxylase CQZ96_013735 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CQZ96_013735 PF02222 ATP-grasp domain CQZ96_013740 PF13406 Transglycosylase SLT domain CQZ96_013775 PF00376 MerR family regulatory protein CQZ96_013775 PF09278 MerR, DNA binding CQZ96_013780 PF00012 Hsp70 protein CQZ96_013785 PF01025 GrpE CQZ96_013800 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CQZ96_013805 PF00005 ABC transporter CQZ96_013810 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_013815 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CQZ96_013820 PF00149 Calcineurin-like phosphoesterase CQZ96_013820 PF02872 5'-nucleotidase, C-terminal domain CQZ96_013890 PF10431 C-terminal, D2-small domain, of ClpB protein CQZ96_013890 PF17871 AAA lid domain CQZ96_013890 PF00004 ATPase family associated with various cellular activities (AAA) CQZ96_013890 PF07724 AAA domain (Cdc48 subfamily) CQZ96_013945 PF00691 OmpA family CQZ96_013945 PF05736 OprF membrane domain CQZ96_013965 PF00440 Bacterial regulatory proteins, tetR family CQZ96_013965 PF17938 Tetracyclin repressor-like, C-terminal domain CQZ96_013970 PF00005 ABC transporter CQZ96_013975 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_013980 PF00296 Luciferase-like monooxygenase CQZ96_013985 PF09084 NMT1/THI5 like CQZ96_013990 PF09084 NMT1/THI5 like CQZ96_013995 PF00696 Amino acid kinase family CQZ96_013995 PF00583 Acetyltransferase (GNAT) family CQZ96_014020 PF00106 short chain dehydrogenase CQZ96_014025 PF13419 Haloacid dehalogenase-like hydrolase CQZ96_014035 PF01323 DSBA-like thioredoxin domain CQZ96_014040 PF00440 Bacterial regulatory proteins, tetR family CQZ96_014045 PF00175 Oxidoreductase NAD-binding domain CQZ96_014045 PF00111 2Fe-2S iron-sulfur cluster binding domain CQZ96_014045 PF00970 Oxidoreductase FAD-binding domain CQZ96_014050 PF00487 Fatty acid desaturase CQZ96_014060 PF03725 3' exoribonuclease family, domain 2 CQZ96_014060 PF01138 3' exoribonuclease family, domain 1 CQZ96_014065 PF04185 Phosphoesterase family CQZ96_014065 PF05506 Domain of unknown function (DUF756) CQZ96_014085 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CQZ96_014085 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CQZ96_014090 PF01510 N-acetylmuramoyl-L-alanine amidase CQZ96_014095 PF03023 Lipid II flippase MurJ CQZ96_014100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CQZ96_014100 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CQZ96_014105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CQZ96_014105 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CQZ96_014110 PF13614 AAA domain CQZ96_014110 PF13807 G-rich domain on putative tyrosine kinase CQZ96_014110 PF02706 Chain length determinant protein CQZ96_014115 PF01451 Low molecular weight phosphotyrosine protein phosphatase CQZ96_014120 PF02563 Polysaccharide biosynthesis/export protein CQZ96_014120 PF10531 SLBB domain CQZ96_014125 PF02719 Polysaccharide biosynthesis protein CQZ96_014130 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CQZ96_014135 PF02348 Cytidylyltransferase CQZ96_014150 PF08666 SAF domain CQZ96_014150 PF03102 NeuB family CQZ96_014175 PF00535 Glycosyl transferase family 2 CQZ96_014180 PF02397 Bacterial sugar transferase CQZ96_014185 PF00483 Nucleotidyl transferase CQZ96_014190 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CQZ96_014190 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CQZ96_014190 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CQZ96_014195 PF00342 Phosphoglucose isomerase CQZ96_014200 PF16363 GDP-mannose 4,6 dehydratase CQZ96_014205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CQZ96_014205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CQZ96_014205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CQZ96_014205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CQZ96_014215 PF00664 ABC transporter transmembrane region CQZ96_014215 PF00005 ABC transporter CQZ96_014240 PF01722 BolA-like protein CQZ96_014250 PF13614 AAA domain CQZ96_014260 PF09335 SNARE associated Golgi protein CQZ96_014265 PF07681 DoxX CQZ96_014275 PF02540 NAD synthase CQZ96_014275 PF00117 Glutamine amidotransferase class-I CQZ96_014275 PF00958 GMP synthase C terminal domain CQZ96_014280 PF04471 Restriction endonuclease CQZ96_014280 PF14338 Mrr N-terminal domain CQZ96_014300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CQZ96_014305 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CQZ96_014310 PF04452 RNA methyltransferase CQZ96_014315 PF00924 Mechanosensitive ion channel CQZ96_014315 PF05552 Conserved TM helix CQZ96_014325 PF16177 Acetyl-coenzyme A synthetase N-terminus CQZ96_014325 PF13193 AMP-binding enzyme C-terminal domain CQZ96_014325 PF00501 AMP-binding enzyme CQZ96_014330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_014330 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_014335 PF00144 Beta-lactamase CQZ96_014340 PF00296 Luciferase-like monooxygenase CQZ96_014345 PF03358 NADPH-dependent FMN reductase CQZ96_014350 PF00072 Response regulator receiver domain CQZ96_014350 PF00196 Bacterial regulatory proteins, luxR family CQZ96_014355 PF07690 Major Facilitator Superfamily CQZ96_014360 PF11842 Domain of unknown function (DUF3362) CQZ96_014360 PF04055 Radical SAM superfamily CQZ96_014360 PF08497 Radical SAM N-terminal CQZ96_014380 PF06123 Inner membrane protein CreD CQZ96_014385 PF00672 HAMP domain CQZ96_014385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_014385 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_014390 PF00486 Transcriptional regulatory protein, C terminal CQZ96_014390 PF00072 Response regulator receiver domain CQZ96_014400 PF03485 Arginyl tRNA synthetase N terminal domain CQZ96_014400 PF05746 DALR anticodon binding domain CQZ96_014400 PF00750 tRNA synthetases class I (R) CQZ96_014415 PF03949 Malic enzyme, NAD binding domain CQZ96_014415 PF00390 Malic enzyme, N-terminal domain CQZ96_014420 PF04717 Type VI secretion system, phage-baseplate injector CQZ96_014420 PF16671 Actin cross-linking domain CQZ96_014440 PF04261 Dyp-type peroxidase family CQZ96_014445 PF01810 LysE type translocator CQZ96_014450 PF01810 LysE type translocator CQZ96_014455 PF00950 ABC 3 transport family CQZ96_014460 PF00005 ABC transporter CQZ96_014470 PF01297 Zinc-uptake complex component A periplasmic CQZ96_014480 PF00119 ATP synthase A chain CQZ96_014485 PF00137 ATP synthase subunit C CQZ96_014490 PF00430 ATP synthase B/B' CF(0) CQZ96_014495 PF00213 ATP synthase delta (OSCP) subunit CQZ96_014500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQZ96_014500 PF00306 ATP synthase alpha/beta chain, C terminal domain CQZ96_014500 PF02874 ATP synthase alpha/beta family, beta-barrel domain CQZ96_014505 PF00231 ATP synthase CQZ96_014510 PF02874 ATP synthase alpha/beta family, beta-barrel domain CQZ96_014510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CQZ96_014515 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CQZ96_014545 PF00255 Glutathione peroxidase CQZ96_014560 PF07690 Major Facilitator Superfamily CQZ96_014565 PF00440 Bacterial regulatory proteins, tetR family CQZ96_014570 PF00892 EamA-like transporter family CQZ96_014575 PF01300 Telomere recombination CQZ96_014580 PF17782 DprA winged helix domain CQZ96_014580 PF02481 DNA recombination-mediator protein A CQZ96_014585 PF01476 LysM domain CQZ96_014590 PF01327 Polypeptide deformylase CQZ96_014615 PF00440 Bacterial regulatory proteins, tetR family CQZ96_014645 PF07995 Glucose / Sorbosone dehydrogenase CQZ96_014665 PF09456 RcsC Alpha-Beta-Loop (ABL) CQZ96_014665 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_014665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_014665 PF00072 Response regulator receiver domain CQZ96_014670 PF04341 Protein of unknown function, DUF485 CQZ96_014675 PF00474 Sodium:solute symporter family CQZ96_014685 PF02028 BCCT, betaine/carnitine/choline family transporter CQZ96_014695 PF00905 Penicillin binding protein transpeptidase domain CQZ96_014700 PF08448 PAS fold CQZ96_014700 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_014710 PF17755 UvrA DNA-binding domain CQZ96_014710 PF17760 UvrA interaction domain CQZ96_014720 PF06942 GlpM protein CQZ96_014725 PF03641 Possible lysine decarboxylase CQZ96_014730 PF00571 CBS domain CQZ96_014730 PF03741 Integral membrane protein TerC family CQZ96_014730 PF03471 Transporter associated domain CQZ96_014735 PF02810 SEC-C motif CQZ96_014740 PF03458 UPF0126 domain CQZ96_014750 PF07690 Major Facilitator Superfamily CQZ96_014755 PF00521 DNA gyrase/topoisomerase IV, subunit A CQZ96_014755 PF03989 DNA gyrase C-terminal domain, beta-propeller CQZ96_014760 PF13193 AMP-binding enzyme C-terminal domain CQZ96_014760 PF00501 AMP-binding enzyme CQZ96_014775 PF00719 Inorganic pyrophosphatase CQZ96_014780 PF03573 outer membrane porin, OprD family CQZ96_014800 PF01078 Magnesium chelatase, subunit ChlI CQZ96_014800 PF13335 Magnesium chelatase, subunit ChlI C-terminal CQZ96_014810 PF00543 Nitrogen regulatory protein P-II CQZ96_014815 PF00909 Ammonium Transporter Family CQZ96_014820 PF03477 ATP cone domain CQZ96_014825 PF01872 RibD C-terminal domain CQZ96_014825 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CQZ96_014830 PF02086 D12 class N6 adenine-specific DNA methyltransferase CQZ96_014835 PF00677 Lumazine binding domain CQZ96_014840 PF09335 SNARE associated Golgi protein CQZ96_014845 PF02875 Mur ligase family, glutamate ligase domain CQZ96_014845 PF08245 Mur ligase middle domain CQZ96_014850 PF01098 Cell cycle protein CQZ96_014860 PF00749 tRNA synthetases class I (E and Q), catalytic domain CQZ96_014865 PF01258 Prokaryotic dksA/traR C4-type zinc finger CQZ96_014870 PF00149 Calcineurin-like phosphoesterase CQZ96_014875 PF00293 NUDIX domain CQZ96_014880 PF13667 ThiC-associated domain CQZ96_014880 PF01964 Radical SAM ThiC family CQZ96_014895 PF01895 PhoU domain CQZ96_014900 PF01053 Cys/Met metabolism PLP-dependent enzyme CQZ96_014915 PF12848 ABC transporter CQZ96_014915 PF00005 ABC transporter CQZ96_014925 PF00977 Histidine biosynthesis protein CQZ96_014930 PF01636 Phosphotransferase enzyme family CQZ96_014945 PF00892 EamA-like transporter family CQZ96_014955 PF00977 Histidine biosynthesis protein CQZ96_014975 PF00117 Glutamine amidotransferase class-I CQZ96_014980 PF00475 Imidazoleglycerol-phosphate dehydratase CQZ96_015010 PF00583 Acetyltransferase (GNAT) family CQZ96_015015 PF05199 GMC oxidoreductase CQZ96_015015 PF00732 GMC oxidoreductase CQZ96_015020 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CQZ96_015020 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CQZ96_015025 PF00672 HAMP domain CQZ96_015025 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_015025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_015030 PF00072 Response regulator receiver domain CQZ96_015030 PF00486 Transcriptional regulatory protein, C terminal CQZ96_015040 PF16921 Tex protein YqgF-like domain CQZ96_015040 PF00575 S1 RNA binding domain CQZ96_015040 PF09371 Tex-like protein N-terminal domain CQZ96_015040 PF17674 HHH domain CQZ96_015045 PF13411 MerR HTH family regulatory protein CQZ96_015050 PF00550 Phosphopantetheine attachment site CQZ96_015050 PF07993 Male sterility protein CQZ96_015050 PF00668 Condensation domain CQZ96_015050 PF00501 AMP-binding enzyme CQZ96_015050 PF13193 AMP-binding enzyme C-terminal domain CQZ96_015060 PF03466 LysR substrate binding domain CQZ96_015060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_015065 PF00106 short chain dehydrogenase CQZ96_015085 PF00529 HlyD membrane-fusion protein of T1SS CQZ96_015085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQZ96_015090 PF00873 AcrB/AcrD/AcrF family CQZ96_015100 PF01545 Cation efflux family CQZ96_015120 PF00749 tRNA synthetases class I (E and Q), catalytic domain CQZ96_015145 PF01795 MraW methylase family CQZ96_015150 PF04999 Cell division protein FtsL CQZ96_015155 PF00905 Penicillin binding protein transpeptidase domain CQZ96_015155 PF03717 Penicillin-binding Protein dimerisation domain CQZ96_015160 PF08245 Mur ligase middle domain CQZ96_015160 PF01225 Mur ligase family, catalytic domain CQZ96_015160 PF02875 Mur ligase family, glutamate ligase domain CQZ96_015165 PF01225 Mur ligase family, catalytic domain CQZ96_015165 PF02875 Mur ligase family, glutamate ligase domain CQZ96_015165 PF08245 Mur ligase middle domain CQZ96_015170 PF00953 Glycosyl transferase family 4 CQZ96_015175 PF13847 Methyltransferase domain CQZ96_015180 PF00905 Penicillin binding protein transpeptidase domain CQZ96_015180 PF00912 Transglycosylase CQZ96_015180 PF17092 Penicillin-binding protein OB-like domain CQZ96_015205 PF07660 Secretin and TonB N terminus short domain CQZ96_015205 PF03958 Bacterial type II/III secretion system short domain CQZ96_015205 PF11741 AMIN domain CQZ96_015205 PF00263 Bacterial type II and III secretion system protein CQZ96_015210 PF01202 Shikimate kinase CQZ96_015215 PF01761 3-dehydroquinate synthase CQZ96_015225 PF01645 Conserved region in glutamate synthase CQZ96_015225 PF04898 Glutamate synthase central domain CQZ96_015225 PF01493 GXGXG motif CQZ96_015225 PF00310 Glutamine amidotransferases class-II CQZ96_015230 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_015230 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CQZ96_015235 PF02525 Flavodoxin-like fold CQZ96_015240 PF01638 HxlR-like helix-turn-helix CQZ96_015250 PF00677 Lumazine binding domain CQZ96_015260 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CQZ96_015270 PF00361 Proton-conducting membrane transporter CQZ96_015275 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CQZ96_015280 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CQZ96_015280 PF00361 Proton-conducting membrane transporter CQZ96_015280 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CQZ96_015280 PF13244 Domain of unknown function (DUF4040) CQZ96_015300 PF01502 Phosphoribosyl-AMP cyclohydrolase CQZ96_015305 PF01494 FAD binding domain CQZ96_015315 PF03109 ABC1 family CQZ96_015325 PF01209 ubiE/COQ5 methyltransferase family CQZ96_015335 PF03976 Polyphosphate kinase 2 (PPK2) CQZ96_015340 PF12802 MarR family CQZ96_015350 PF01494 FAD binding domain CQZ96_015355 PF00561 alpha/beta hydrolase fold CQZ96_015360 PF17645 Arylmalonate decarboxylase CQZ96_015365 PF00857 Isochorismatase family CQZ96_015370 PF07690 Major Facilitator Superfamily CQZ96_015380 PF00881 Nitroreductase family CQZ96_015390 PF17946 RecC C-terminal domain CQZ96_015395 PF13361 UvrD-like helicase C-terminal domain CQZ96_015395 PF12705 PD-(D/E)XK nuclease superfamily CQZ96_015395 PF00580 UvrD/REP helicase N-terminal domain CQZ96_015400 PF13538 UvrD-like helicase C-terminal domain CQZ96_015410 PF00312 Ribosomal protein S15 CQZ96_015415 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CQZ96_015415 PF03725 3' exoribonuclease family, domain 2 CQZ96_015415 PF01138 3' exoribonuclease family, domain 1 CQZ96_015415 PF00013 KH domain CQZ96_015415 PF00575 S1 RNA binding domain CQZ96_015420 PF01544 CorA-like Mg2+ transporter protein CQZ96_015425 PF04325 Protein of unknown function (DUF465) CQZ96_015435 PF00226 DnaJ domain CQZ96_015435 PF01556 DnaJ C terminal domain CQZ96_015440 PF01430 Hsp33 protein CQZ96_015445 PF02254 TrkA-N domain CQZ96_015445 PF00999 Sodium/hydrogen exchanger family CQZ96_015450 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CQZ96_015450 PF18074 Primosomal protein N C-terminal domain CQZ96_015450 PF17764 3′ DNA-binding domain (3′BD) CQZ96_015450 PF00271 Helicase conserved C-terminal domain CQZ96_015450 PF00270 DEAD/DEAH box helicase CQZ96_015455 PF00482 Type II secretion system (T2SS), protein F CQZ96_015460 PF08334 Type II secretion system (T2SS), protein G CQZ96_015460 PF07963 Prokaryotic N-terminal methylation motif CQZ96_015475 PF09334 tRNA synthetases class I (M) CQZ96_015475 PF01588 Putative tRNA binding domain CQZ96_015475 PF08264 Anticodon-binding domain of tRNA CQZ96_015480 PF00795 Carbon-nitrogen hydrolase CQZ96_015485 PF03471 Transporter associated domain CQZ96_015485 PF00571 CBS domain CQZ96_015490 PF01206 Sulfurtransferase TusA CQZ96_015495 PF04717 Type VI secretion system, phage-baseplate injector CQZ96_015525 PF01177 Asp/Glu/Hydantoin racemase CQZ96_015535 PF00762 Ferrochelatase CQZ96_015540 PF00753 Metallo-beta-lactamase superfamily CQZ96_015545 PF03884 DNA gyrase inhibitor YacG CQZ96_015575 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CQZ96_015580 PF01197 Ribosomal protein L31 CQZ96_015585 PF03109 ABC1 family CQZ96_015595 PF01554 MatE CQZ96_015605 PF06969 HemN C-terminal domain CQZ96_015605 PF04055 Radical SAM superfamily CQZ96_015615 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_015615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_015615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_015615 PF12806 Acetyl-CoA dehydrogenase C-terminal like CQZ96_015625 PF01488 Shikimate / quinate 5-dehydrogenase CQZ96_015625 PF08501 Shikimate dehydrogenase substrate binding domain CQZ96_015625 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CQZ96_015640 PF06969 HemN C-terminal domain CQZ96_015640 PF04055 Radical SAM superfamily CQZ96_015645 PF00925 GTP cyclohydrolase II CQZ96_015650 PF02780 Transketolase, C-terminal domain CQZ96_015650 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CQZ96_015650 PF02779 Transketolase, pyrimidine binding domain CQZ96_015655 PF00459 Inositol monophosphatase family CQZ96_015660 PF00270 DEAD/DEAH box helicase CQZ96_015660 PF00271 Helicase conserved C-terminal domain CQZ96_015665 PF00005 ABC transporter CQZ96_015670 PF02405 Permease MlaE CQZ96_015675 PF02470 MlaD protein CQZ96_015690 PF01544 CorA-like Mg2+ transporter protein CQZ96_015695 PF03641 Possible lysine decarboxylase CQZ96_015700 PF00293 NUDIX domain CQZ96_015705 PF00156 Phosphoribosyl transferase domain CQZ96_015710 PF17191 RecG wedge domain CQZ96_015710 PF00270 DEAD/DEAH box helicase CQZ96_015710 PF00271 Helicase conserved C-terminal domain CQZ96_015725 PF01553 Acyltransferase CQZ96_015735 PF00375 Sodium:dicarboxylate symporter family CQZ96_015745 PF01926 50S ribosome-binding GTPase CQZ96_015750 PF02082 Transcriptional regulator CQZ96_015755 PF00970 Oxidoreductase FAD-binding domain CQZ96_015755 PF00175 Oxidoreductase NAD-binding domain CQZ96_015755 PF00042 Globin CQZ96_015760 PF05872 Bacterial protein of unknown function (DUF853) CQZ96_015765 PF01053 Cys/Met metabolism PLP-dependent enzyme CQZ96_015770 PF00117 Glutamine amidotransferase class-I CQZ96_015775 PF00338 Ribosomal protein S10p/S20e CQZ96_015780 PF00297 Ribosomal protein L3 CQZ96_015785 PF00573 Ribosomal protein L4/L1 family CQZ96_015790 PF00276 Ribosomal protein L23 CQZ96_015795 PF00181 Ribosomal Proteins L2, RNA binding domain CQZ96_015795 PF03947 Ribosomal Proteins L2, C-terminal domain CQZ96_015800 PF00203 Ribosomal protein S19 CQZ96_015805 PF00237 Ribosomal protein L22p/L17e CQZ96_015810 PF07650 KH domain CQZ96_015810 PF00189 Ribosomal protein S3, C-terminal domain CQZ96_015815 PF00252 Ribosomal protein L16p/L10e CQZ96_015820 PF00831 Ribosomal L29 protein CQZ96_015825 PF00366 Ribosomal protein S17 CQZ96_015830 PF00238 Ribosomal protein L14p/L23e CQZ96_015835 PF00467 KOW motif CQZ96_015835 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CQZ96_015840 PF00281 Ribosomal protein L5 CQZ96_015840 PF00673 ribosomal L5P family C-terminus CQZ96_015845 PF00253 Ribosomal protein S14p/S29e CQZ96_015850 PF00410 Ribosomal protein S8 CQZ96_015855 PF00347 Ribosomal protein L6 CQZ96_015860 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CQZ96_015865 PF00333 Ribosomal protein S5, N-terminal domain CQZ96_015865 PF03719 Ribosomal protein S5, C-terminal domain CQZ96_015870 PF00327 Ribosomal protein L30p/L7e CQZ96_015875 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CQZ96_015880 PF00344 SecY translocase CQZ96_015885 PF00444 Ribosomal protein L36 CQZ96_015890 PF00416 Ribosomal protein S13/S18 CQZ96_015895 PF00411 Ribosomal protein S11 CQZ96_015900 PF00163 Ribosomal protein S4/S9 N-terminal domain CQZ96_015900 PF01479 S4 domain CQZ96_015905 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CQZ96_015905 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CQZ96_015905 PF01000 RNA polymerase Rpb3/RpoA insert domain CQZ96_015910 PF01196 Ribosomal protein L17 CQZ96_015915 PF00743 Flavin-binding monooxygenase-like CQZ96_015920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_015920 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_015920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_015925 PF03937 Flavinator of succinate dehydrogenase CQZ96_015970 PF09526 Probable metal-binding protein (DUF2387) CQZ96_015975 PF01432 Peptidase family M3 CQZ96_015985 PF08461 Ribonuclease R winged-helix domain CQZ96_015985 PF00575 S1 RNA binding domain CQZ96_015985 PF00773 RNB domain CQZ96_015985 PF17876 Cold shock domain CQZ96_015985 PF08206 Ribonuclease B OB domain CQZ96_016015 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_016020 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_016025 PF00005 ABC transporter CQZ96_016030 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQZ96_016035 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQZ96_016040 PF01638 HxlR-like helix-turn-helix CQZ96_016045 PF07690 Major Facilitator Superfamily CQZ96_016070 PF01557 Fumarylacetoacetate (FAA) hydrolase family CQZ96_016080 PF03631 Virulence factor BrkB CQZ96_016085 PF03358 NADPH-dependent FMN reductase CQZ96_016125 PF01062 Bestrophin, RFP-TM, chloride channel CQZ96_016130 PF04002 RadC-like JAB domain CQZ96_016135 PF02441 Flavoprotein CQZ96_016135 PF04127 DNA / pantothenate metabolism flavoprotein CQZ96_016140 PF07361 Cytochrome b562 CQZ96_016145 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CQZ96_016145 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CQZ96_016150 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA CQZ96_016170 PF02556 Preprotein translocase subunit SecB CQZ96_016175 PF00462 Glutaredoxin CQZ96_016185 PF03193 RsgA GTPase CQZ96_016190 PF00929 Exonuclease CQZ96_016205 PF04717 Type VI secretion system, phage-baseplate injector CQZ96_016235 PF02321 Outer membrane efflux protein CQZ96_016240 PF02687 FtsX-like permease family CQZ96_016240 PF00005 ABC transporter CQZ96_016240 PF12704 MacB-like periplasmic core domain CQZ96_016245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQZ96_016260 PF09334 tRNA synthetases class I (M) CQZ96_016260 PF08264 Anticodon-binding domain of tRNA CQZ96_016260 PF13603 Leucyl-tRNA synthetase, Domain 2 CQZ96_016260 PF00133 tRNA synthetases class I (I, L, M and V) CQZ96_016270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CQZ96_016270 PF00205 Thiamine pyrophosphate enzyme, central domain CQZ96_016270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CQZ96_016275 PF10369 Small subunit of acetolactate synthase CQZ96_016280 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CQZ96_016280 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CQZ96_016295 PF13439 Glycosyltransferase Family 4 CQZ96_016295 PF00534 Glycosyl transferases group 1 CQZ96_016300 PF01569 PAP2 superfamily CQZ96_016305 PF04384 Iron-sulphur cluster assembly CQZ96_016310 PF00334 Nucleoside diphosphate kinase CQZ96_016315 PF04055 Radical SAM superfamily CQZ96_016325 PF13464 Domain of unknown function (DUF4115) CQZ96_016330 PF04551 GcpE protein CQZ96_016335 PF13393 Histidyl-tRNA synthetase CQZ96_016335 PF03129 Anticodon binding domain CQZ96_016345 PF13360 PQQ-like domain CQZ96_016350 PF01926 50S ribosome-binding GTPase CQZ96_016350 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CQZ96_016360 PF00909 Ammonium Transporter Family CQZ96_016360 PF00672 HAMP domain CQZ96_016370 PF01261 Xylose isomerase-like TIM barrel CQZ96_016375 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CQZ96_016375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CQZ96_016380 PF00378 Enoyl-CoA hydratase/isomerase CQZ96_016385 PF01627 Hpt domain CQZ96_016385 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CQZ96_016385 PF00672 HAMP domain CQZ96_016385 PF00072 Response regulator receiver domain CQZ96_016385 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_016385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_016390 PF00291 Pyridoxal-phosphate dependent enzyme CQZ96_016400 PF05958 tRNA (Uracil-5-)-methyltransferase CQZ96_016405 PF04607 Region found in RelA / SpoT proteins CQZ96_016405 PF13291 ACT domain CQZ96_016405 PF02824 TGS domain CQZ96_016420 PF03819 MazG nucleotide pyrophosphohydrolase domain CQZ96_016430 PF12626 Polymerase A arginine-rich C-terminus CQZ96_016430 PF12627 Probable RNA and SrmB- binding site of polymerase A CQZ96_016430 PF01743 Poly A polymerase head domain CQZ96_016435 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CQZ96_016440 PF02548 Ketopantoate hydroxymethyltransferase CQZ96_016445 PF02569 Pantoate-beta-alanine ligase CQZ96_016450 PF03668 P-loop ATPase protein family CQZ96_016455 PF00381 PTS HPr component phosphorylation site CQZ96_016460 PF04751 Protein of unknown function (DUF615) CQZ96_016470 PF00672 HAMP domain CQZ96_016470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_016470 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_016475 PF00486 Transcriptional regulatory protein, C terminal CQZ96_016475 PF00072 Response regulator receiver domain CQZ96_016480 PF04237 YjbR CQZ96_016490 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CQZ96_016510 PF01923 Cobalamin adenosyltransferase CQZ96_016515 PF07715 TonB-dependent Receptor Plug Domain CQZ96_016515 PF00593 TonB dependent receptor CQZ96_016520 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CQZ96_016525 PF00291 Pyridoxal-phosphate dependent enzyme CQZ96_016545 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CQZ96_016545 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CQZ96_016555 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CQZ96_016580 PF00437 Type II/IV secretion system protein CQZ96_016590 PF02566 OsmC-like protein CQZ96_016595 PF01047 MarR family CQZ96_016600 PF00795 Carbon-nitrogen hydrolase CQZ96_016650 PF12419 SNF2 Helicase protein CQZ96_016650 PF00271 Helicase conserved C-terminal domain CQZ96_016650 PF00176 SNF2 family N-terminal domain CQZ96_016655 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_016655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_016655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_016660 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_016660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_016660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_016665 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CQZ96_016670 PF01850 PIN domain CQZ96_016675 PF17932 Tetracyclin repressor-like, C-terminal domain CQZ96_016675 PF00440 Bacterial regulatory proteins, tetR family CQZ96_016690 PF01039 Carboxyl transferase domain CQZ96_016695 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_016695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_016695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_016700 PF00378 Enoyl-CoA hydratase/isomerase CQZ96_016705 PF02785 Biotin carboxylase C-terminal domain CQZ96_016705 PF00289 Biotin carboxylase, N-terminal domain CQZ96_016705 PF00364 Biotin-requiring enzyme CQZ96_016705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQZ96_016710 PF00849 RNA pseudouridylate synthase CQZ96_016715 PF07690 Major Facilitator Superfamily CQZ96_016715 PF00083 Sugar (and other) transporter CQZ96_016720 PF03006 Haemolysin-III related CQZ96_016735 PF13673 Acetyltransferase (GNAT) domain CQZ96_016740 PF00291 Pyridoxal-phosphate dependent enzyme CQZ96_016770 PF04717 Type VI secretion system, phage-baseplate injector CQZ96_016820 PF01207 Dihydrouridine synthase (Dus) CQZ96_016835 PF02978 Signal peptide binding domain CQZ96_016835 PF02881 SRP54-type protein, helical bundle domain CQZ96_016835 PF00448 SRP54-type protein, GTPase domain CQZ96_016850 PF03309 Type III pantothenate kinase CQZ96_016860 PF01925 Sulfite exporter TauE/SafE CQZ96_016870 PF06470 SMC proteins Flexible Hinge Domain CQZ96_016870 PF02463 RecF/RecN/SMC N terminal domain CQZ96_016880 PF00533 BRCA1 C Terminus (BRCT) domain CQZ96_016880 PF01653 NAD-dependent DNA ligase adenylation domain CQZ96_016880 PF03120 NAD-dependent DNA ligase OB-fold domain CQZ96_016880 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CQZ96_016880 PF12826 Helix-hairpin-helix motif CQZ96_016885 PF07715 TonB-dependent Receptor Plug Domain CQZ96_016885 PF00593 TonB dependent receptor CQZ96_016890 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CQZ96_016895 PF00210 Ferritin-like domain CQZ96_016900 PF00578 AhpC/TSA family CQZ96_016910 PF12697 Alpha/beta hydrolase family CQZ96_016915 PF06968 Biotin and Thiamin Synthesis associated domain CQZ96_016915 PF04055 Radical SAM superfamily CQZ96_016915 PF00202 Aminotransferase class-III CQZ96_016920 PF00155 Aminotransferase class I and II CQZ96_016940 PF07411 Domain of unknown function (DUF1508) CQZ96_016955 PF00293 NUDIX domain CQZ96_016960 PF01011 PQQ enzyme repeat CQZ96_016965 PF04966 Carbohydrate-selective porin, OprB family CQZ96_016970 PF02515 CoA-transferase family III CQZ96_016975 PF12833 Helix-turn-helix domain CQZ96_016975 PF02311 AraC-like ligand binding domain CQZ96_016980 PF00583 Acetyltransferase (GNAT) family CQZ96_016995 PF02803 Thiolase, C-terminal domain CQZ96_016995 PF00108 Thiolase, N-terminal domain CQZ96_017000 PF00378 Enoyl-CoA hydratase/isomerase CQZ96_017000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQZ96_017000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQZ96_017005 PF05656 Protein of unknown function (DUF805) CQZ96_017025 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CQZ96_017025 PF12833 Helix-turn-helix domain CQZ96_017035 PF00290 Tryptophan synthase alpha chain CQZ96_017040 PF01039 Carboxyl transferase domain CQZ96_017045 PF02875 Mur ligase family, glutamate ligase domain CQZ96_017045 PF08245 Mur ligase middle domain CQZ96_017060 PF00753 Metallo-beta-lactamase superfamily CQZ96_017070 PF01300 Telomere recombination CQZ96_017075 PF04315 Elongation factor P hydroxylase CQZ96_017080 PF02620 Large ribosomal RNA subunit accumulation protein YceD CQZ96_017085 PF01783 Ribosomal L32p protein family CQZ96_017090 PF00698 Acyl transferase domain CQZ96_017100 PF00550 Phosphopantetheine attachment site CQZ96_017105 PF01476 LysM domain CQZ96_017105 PF04972 BON domain CQZ96_017110 PF10417 C-terminal domain of 1-Cys peroxiredoxin CQZ96_017110 PF00578 AhpC/TSA family CQZ96_017115 PF01043 SecA preprotein cross-linking domain CQZ96_017115 PF02810 SEC-C motif CQZ96_017115 PF07517 SecA DEAD-like domain CQZ96_017115 PF07516 SecA Wing and Scaffold domain CQZ96_017125 PF01960 ArgJ family CQZ96_017130 PF02445 Quinolinate synthetase A protein CQZ96_017160 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_017160 PF17152 Periplasmic sensor domain CQZ96_017165 PF13689 YfiR/HmsC-like CQZ96_017195 PF00753 Metallo-beta-lactamase superfamily CQZ96_017205 PF09334 tRNA synthetases class I (M) CQZ96_017205 PF01588 Putative tRNA binding domain CQZ96_017240 PF10609 NUBPL iron-transfer P-loop NTPase CQZ96_017245 PF01048 Phosphorylase superfamily CQZ96_017260 PF00692 dUTPase CQZ96_017300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CQZ96_017300 PF03129 Anticodon binding domain CQZ96_017300 PF04073 Aminoacyl-tRNA editing domain CQZ96_017310 PF00072 Response regulator receiver domain CQZ96_017315 PF00072 Response regulator receiver domain CQZ96_017320 PF01584 CheW-like domain CQZ96_017325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CQZ96_017325 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CQZ96_017330 PF01584 CheW-like domain CQZ96_017330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_017330 PF02895 Signal transducing histidine kinase, homodimeric domain CQZ96_017330 PF00072 Response regulator receiver domain CQZ96_017330 PF01627 Hpt domain CQZ96_017340 PF07687 Peptidase dimerisation domain CQZ96_017340 PF01546 Peptidase family M20/M25/M40 CQZ96_017355 PF04304 Protein of unknown function (DUF454) CQZ96_017410 PF00258 Flavodoxin CQZ96_017410 PF00175 Oxidoreductase NAD-binding domain CQZ96_017410 PF00667 FAD binding domain CQZ96_017420 PF12805 FUSC-like inner membrane protein yccS CQZ96_017425 PF07690 Major Facilitator Superfamily CQZ96_017440 PF05552 Conserved TM helix CQZ96_017460 PF00291 Pyridoxal-phosphate dependent enzyme CQZ96_017465 PF13533 Biotin-lipoyl like CQZ96_017475 PF00440 Bacterial regulatory proteins, tetR family CQZ96_017475 PF08361 MAATS-type transcriptional repressor, C-terminal region CQZ96_017490 PF08241 Methyltransferase domain CQZ96_017505 PF06100 MCRA family CQZ96_017515 PF03783 Curli production assembly/transport component CsgG CQZ96_017525 PF05643 Putative bacterial lipoprotein (DUF799) CQZ96_017530 PF00005 ABC transporter CQZ96_017535 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_017540 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_017545 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQZ96_017550 PF04552 Sigma-54, DNA binding domain CQZ96_017550 PF04963 Sigma-54 factor, core binding domain CQZ96_017550 PF00309 Sigma-54 factor, Activator interacting domain (AID) CQZ96_017555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CQZ96_017560 PF01722 BolA-like protein CQZ96_017565 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CQZ96_017570 PF01634 ATP phosphoribosyltransferase CQZ96_017580 PF00815 Histidinol dehydrogenase CQZ96_017585 PF00155 Aminotransferase class I and II CQZ96_017590 PF00425 chorismate binding enzyme CQZ96_017590 PF04715 Anthranilate synthase component I, N terminal region CQZ96_017630 PF00293 NUDIX domain CQZ96_017635 PF00132 Bacterial transferase hexapeptide (six repeats) CQZ96_017640 PF00814 Glycoprotease family CQZ96_017645 PF02673 Bacitracin resistance protein BacA CQZ96_017650 PF04445 Putative SAM-dependent methyltransferase CQZ96_017660 PF00756 Putative esterase CQZ96_017665 PF05987 Bacterial protein of unknown function (DUF898) CQZ96_017675 PF00834 Ribulose-phosphate 3 epimerase family CQZ96_017685 PF00394 Multicopper oxidase CQZ96_017685 PF07731 Multicopper oxidase CQZ96_017685 PF07732 Multicopper oxidase CQZ96_017700 PF00893 Small Multidrug Resistance protein CQZ96_017705 PF00893 Small Multidrug Resistance protein CQZ96_017710 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CQZ96_017710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CQZ96_017715 PF08378 Nuclease-related domain CQZ96_017725 PF02581 Thiamine monophosphate synthase CQZ96_017725 PF03070 TENA/THI-4/PQQC family CQZ96_017725 PF08543 Phosphomethylpyrimidine kinase CQZ96_017730 PF13419 Haloacid dehalogenase-like hydrolase CQZ96_017735 PF01037 Lrp/AsnC ligand binding domain CQZ96_017740 PF01266 FAD dependent oxidoreductase CQZ96_017745 PF01168 Alanine racemase, N-terminal domain CQZ96_017745 PF00842 Alanine racemase, C-terminal domain CQZ96_017755 PF00324 Amino acid permease CQZ96_017760 PF01757 Acyltransferase family CQZ96_017775 PF02801 Beta-ketoacyl synthase, C-terminal domain CQZ96_017775 PF00109 Beta-ketoacyl synthase, N-terminal domain CQZ96_017780 PF13569 Domain of unknown function (DUF4132) CQZ96_017790 PF05762 VWA domain containing CoxE-like protein CQZ96_017800 PF07728 AAA domain (dynein-related subfamily) CQZ96_017810 PF00164 Ribosomal protein S12/S23 CQZ96_017815 PF00177 Ribosomal protein S7p/S5e CQZ96_017820 PF14492 Elongation Factor G, domain II CQZ96_017820 PF03764 Elongation factor G, domain IV CQZ96_017820 PF00009 Elongation factor Tu GTP binding domain CQZ96_017820 PF03144 Elongation factor Tu domain 2 CQZ96_017820 PF00679 Elongation factor G C-terminus CQZ96_017825 PF03144 Elongation factor Tu domain 2 CQZ96_017825 PF03143 Elongation factor Tu C-terminal domain CQZ96_017825 PF00009 Elongation factor Tu GTP binding domain CQZ96_017840 PF00583 Acetyltransferase (GNAT) family CQZ96_017845 PF04377 Arginine-tRNA-protein transferase, C terminus CQZ96_017845 PF04376 Arginine-tRNA-protein transferase, N terminus CQZ96_017850 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CQZ96_017855 PF13847 Methyltransferase domain CQZ96_017855 PF10119 Predicted methyltransferase regulatory domain CQZ96_017860 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_017865 PF01580 FtsK/SpoIIIE family CQZ96_017865 PF17854 FtsK alpha domain CQZ96_017865 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CQZ96_017865 PF09397 Ftsk gamma domain CQZ96_017875 PF01810 LysE type translocator CQZ96_017890 PF01553 Acyltransferase CQZ96_017895 PF07969 Amidohydrolase family CQZ96_017900 PF02492 CobW/HypB/UreG, nucleotide-binding domain CQZ96_017900 PF07683 Cobalamin synthesis protein cobW C-terminal domain CQZ96_017905 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CQZ96_017920 PF15975 Flotillin CQZ96_017920 PF01145 SPFH domain / Band 7 family CQZ96_017925 PF07290 Protein of unknown function (DUF1449) CQZ96_017940 PF17151 Periplasmic sensor domain CQZ96_017940 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_017945 PF08946 Osmosensory transporter coiled coil CQZ96_017945 PF00083 Sugar (and other) transporter CQZ96_017950 PF01327 Polypeptide deformylase CQZ96_017955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CQZ96_017955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CQZ96_017965 PF13356 Arm DNA-binding domain CQZ96_017965 PF00589 Phage integrase family CQZ96_017990 PF16671 Actin cross-linking domain CQZ96_017990 PF04717 Type VI secretion system, phage-baseplate injector CQZ96_018055 PF14579 Helix-hairpin-helix motif CQZ96_018055 PF07733 Bacterial DNA polymerase III alpha NTPase domain CQZ96_018055 PF02811 PHP domain CQZ96_018055 PF11490 DNA polymerase III polC-type N-terminus II CQZ96_018055 PF00929 Exonuclease CQZ96_018055 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CQZ96_018060 PF12462 DNA helicase IV / RNA helicase N terminal CQZ96_018060 PF13361 UvrD-like helicase C-terminal domain CQZ96_018060 PF00580 UvrD/REP helicase N-terminal domain CQZ96_018060 PF00580 UvrD/REP helicase N-terminal domain CQZ96_018060 PF13361 UvrD-like helicase C-terminal domain CQZ96_018060 PF12462 DNA helicase IV / RNA helicase N terminal CQZ96_018115 PF08240 Alcohol dehydrogenase GroES-like domain CQZ96_018115 PF08659 KR domain CQZ96_018115 PF00109 Beta-ketoacyl synthase, N-terminal domain CQZ96_018115 PF02801 Beta-ketoacyl synthase, C-terminal domain CQZ96_018115 PF00550 Phosphopantetheine attachment site CQZ96_018115 PF16197 Ketoacyl-synthetase C-terminal extension CQZ96_018115 PF14765 Polyketide synthase dehydratase CQZ96_018115 PF00698 Acyl transferase domain CQZ96_018120 PF00106 short chain dehydrogenase CQZ96_018125 PF00561 alpha/beta hydrolase fold CQZ96_018130 PF00561 alpha/beta hydrolase fold CQZ96_018140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CQZ96_018140 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_018145 PF01638 HxlR-like helix-turn-helix CQZ96_018155 PF07715 TonB-dependent Receptor Plug Domain CQZ96_018155 PF00593 TonB dependent receptor CQZ96_018170 PF07858 Limonene-1,2-epoxide hydrolase catalytic domain CQZ96_018190 PF05114 Protein of unknown function (DUF692) CQZ96_018200 PF08281 Sigma-70, region 4 CQZ96_018200 PF04542 Sigma-70 region 2 CQZ96_018210 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_018210 PF00672 HAMP domain CQZ96_018210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_018215 PF00486 Transcriptional regulatory protein, C terminal CQZ96_018215 PF00072 Response regulator receiver domain CQZ96_018225 PF00576 HIUase/Transthyretin family CQZ96_018275 PF00512 His Kinase A (phospho-acceptor) domain CQZ96_018275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CQZ96_018275 PF00672 HAMP domain CQZ96_018280 PF00486 Transcriptional regulatory protein, C terminal CQZ96_018280 PF00072 Response regulator receiver domain CQZ96_018295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_018295 PF03466 LysR substrate binding domain CQZ96_018300 PF00291 Pyridoxal-phosphate dependent enzyme CQZ96_018305 PF00290 Tryptophan synthase alpha chain CQZ96_018310 PF00925 GTP cyclohydrolase II CQZ96_018330 PF07690 Major Facilitator Superfamily CQZ96_018335 PF03573 outer membrane porin, OprD family CQZ96_018395 PF07690 Major Facilitator Superfamily CQZ96_018395 PF00083 Sugar (and other) transporter CQZ96_018400 PF00171 Aldehyde dehydrogenase family CQZ96_018400 PF01575 MaoC like domain CQZ96_018405 PF05138 Phenylacetic acid catabolic protein CQZ96_018410 PF06243 Phenylacetic acid degradation B CQZ96_018415 PF05138 Phenylacetic acid catabolic protein CQZ96_018420 PF01883 Iron-sulfur cluster assembly protein CQZ96_018425 PF00970 Oxidoreductase FAD-binding domain CQZ96_018425 PF00175 Oxidoreductase NAD-binding domain CQZ96_018425 PF00111 2Fe-2S iron-sulfur cluster binding domain CQZ96_018430 PF00378 Enoyl-CoA hydratase/isomerase CQZ96_018435 PF00378 Enoyl-CoA hydratase/isomerase CQZ96_018440 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CQZ96_018440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CQZ96_018440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CQZ96_018445 PF02803 Thiolase, C-terminal domain CQZ96_018445 PF00108 Thiolase, N-terminal domain CQZ96_018450 PF00501 AMP-binding enzyme CQZ96_018450 PF14535 AMP-binding enzyme C-terminal domain CQZ96_018455 PF07848 PaaX-like protein CQZ96_018455 PF08223 PaaX-like protein C-terminal domain CQZ96_018460 PF00132 Bacterial transferase hexapeptide (six repeats) CQZ96_018470 PF00155 Aminotransferase class I and II CQZ96_018475 PF06826 Predicted Permease Membrane Region CQZ96_018475 PF02080 TrkA-C domain CQZ96_018485 PF13018 Extended Signal Peptide of Type V secretion system CQZ96_018485 PF03895 YadA-like membrane anchor domain CQZ96_018485 PF05658 Head domain of trimeric autotransporter adhesin CQZ96_018485 PF05662 Coiled stalk of trimeric autotransporter adhesin CQZ96_018490 PF04355 SmpA / OmlA family CQZ96_018495 PF00756 Putative esterase CQZ96_018500 PF01614 Bacterial transcriptional regulator CQZ96_018500 PF09339 IclR helix-turn-helix domain CQZ96_018505 PF01494 FAD binding domain CQZ96_018520 PF00111 2Fe-2S iron-sulfur cluster binding domain CQZ96_018520 PF00175 Oxidoreductase NAD-binding domain CQZ96_018525 PF00355 Rieske [2Fe-2S] domain CQZ96_018530 PF07690 Major Facilitator Superfamily CQZ96_018535 PF03573 outer membrane porin, OprD family CQZ96_018550 PF07690 Major Facilitator Superfamily CQZ96_018555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_018555 PF03466 LysR substrate binding domain CQZ96_018565 PF04403 Paraquat-inducible protein A CQZ96_018570 PF02470 MlaD protein CQZ96_018580 PF05506 Domain of unknown function (DUF756) CQZ96_018580 PF04185 Phosphoesterase family CQZ96_018620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_018620 PF03466 LysR substrate binding domain CQZ96_018630 PF00291 Pyridoxal-phosphate dependent enzyme CQZ96_018635 PF02447 GntP family permease CQZ96_018640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_018640 PF03466 LysR substrate binding domain CQZ96_018650 PF08281 Sigma-70, region 4 CQZ96_018650 PF04542 Sigma-70 region 2 CQZ96_018660 PF01126 Heme oxygenase CQZ96_018675 PF00873 AcrB/AcrD/AcrF family CQZ96_018680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CQZ96_018690 PF09278 MerR, DNA binding CQZ96_018690 PF00376 MerR family regulatory protein CQZ96_018695 PF04717 Type VI secretion system, phage-baseplate injector CQZ96_018740 PF01638 HxlR-like helix-turn-helix CQZ96_018755 PF01965 DJ-1/PfpI family CQZ96_018760 PF00196 Bacterial regulatory proteins, luxR family CQZ96_018760 PF03472 Autoinducer binding domain CQZ96_018770 PF00355 Rieske [2Fe-2S] domain CQZ96_018780 PF00355 Rieske [2Fe-2S] domain CQZ96_018790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CQZ96_018795 PF14759 Reductase C-terminal CQZ96_018795 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_018800 PF07690 Major Facilitator Superfamily CQZ96_018810 PF12697 Alpha/beta hydrolase family CQZ96_018820 PF03447 Homoserine dehydrogenase, NAD binding domain CQZ96_018820 PF01958 Domain of unknown function DUF108 CQZ96_018825 PF00171 Aldehyde dehydrogenase family CQZ96_018830 PF00205 Thiamine pyrophosphate enzyme, central domain CQZ96_018830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CQZ96_018830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CQZ96_018840 PF00701 Dihydrodipicolinate synthetase family CQZ96_018845 PF00596 Class II Aldolase and Adducin N-terminal domain CQZ96_018850 PF00392 Bacterial regulatory proteins, gntR family CQZ96_018850 PF00155 Aminotransferase class I and II CQZ96_018860 PF00392 Bacterial regulatory proteins, gntR family CQZ96_018860 PF00155 Aminotransferase class I and II CQZ96_018895 PF07690 Major Facilitator Superfamily CQZ96_018900 PF00440 Bacterial regulatory proteins, tetR family CQZ96_018910 PF05199 GMC oxidoreductase CQZ96_018910 PF00732 GMC oxidoreductase CQZ96_018915 PF00171 Aldehyde dehydrogenase family CQZ96_018920 PF00440 Bacterial regulatory proteins, tetR family CQZ96_018920 PF13977 BetI-type transcriptional repressor, C-terminal CQZ96_018925 PF02028 BCCT, betaine/carnitine/choline family transporter CQZ96_018930 PF00593 TonB dependent receptor CQZ96_018930 PF07660 Secretin and TonB N terminus short domain CQZ96_018930 PF07715 TonB-dependent Receptor Plug Domain CQZ96_018945 PF04055 Radical SAM superfamily CQZ96_018950 PF00676 Dehydrogenase E1 component CQZ96_018955 PF02779 Transketolase, pyrimidine binding domain CQZ96_018955 PF02780 Transketolase, C-terminal domain CQZ96_018960 PF02817 e3 binding domain CQZ96_018960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQZ96_018960 PF00364 Biotin-requiring enzyme CQZ96_018965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQZ96_018965 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_018970 PF00106 short chain dehydrogenase CQZ96_018975 PF00107 Zinc-binding dehydrogenase CQZ96_018975 PF08240 Alcohol dehydrogenase GroES-like domain CQZ96_018985 PF00664 ABC transporter transmembrane region CQZ96_018985 PF00005 ABC transporter CQZ96_018985 PF08021 Siderophore-interacting FAD-binding domain CQZ96_018985 PF04954 Siderophore-interacting protein CQZ96_018990 PF00005 ABC transporter CQZ96_018995 PF01032 FecCD transport family CQZ96_019000 PF01032 FecCD transport family CQZ96_019005 PF00005 ABC transporter CQZ96_019010 PF01497 Periplasmic binding protein CQZ96_019015 PF00593 TonB dependent receptor CQZ96_019015 PF07715 TonB-dependent Receptor Plug Domain CQZ96_019030 PF00296 Luciferase-like monooxygenase CQZ96_019035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQZ96_019040 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_019045 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_019045 PF12911 N-terminal TM domain of oligopeptide transport permease C CQZ96_019050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CQZ96_019050 PF00005 ABC transporter CQZ96_019055 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_019055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_019055 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_019065 PF00005 ABC transporter CQZ96_019065 PF00664 ABC transporter transmembrane region CQZ96_019070 PF00005 ABC transporter CQZ96_019070 PF00664 ABC transporter transmembrane region CQZ96_019075 PF07715 TonB-dependent Receptor Plug Domain CQZ96_019075 PF00593 TonB dependent receptor CQZ96_019085 PF00296 Luciferase-like monooxygenase CQZ96_019090 PF00158 Sigma-54 interaction domain CQZ96_019095 PF00902 Sec-independent protein translocase protein (TatC) CQZ96_019100 PF02416 mttA/Hcf106 family CQZ96_019105 PF02416 mttA/Hcf106 family CQZ96_019110 PF00005 ABC transporter CQZ96_019115 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_019120 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_019125 PF09084 NMT1/THI5 like CQZ96_019130 PF00296 Luciferase-like monooxygenase CQZ96_019135 PF03544 Gram-negative bacterial TonB protein C-terminal CQZ96_019140 PF01618 MotA/TolQ/ExbB proton channel family CQZ96_019145 PF02472 Biopolymer transport protein ExbD/TolR CQZ96_019150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CQZ96_019160 PF07715 TonB-dependent Receptor Plug Domain CQZ96_019160 PF00593 TonB dependent receptor CQZ96_019165 PF00296 Luciferase-like monooxygenase CQZ96_019170 PF00561 alpha/beta hydrolase fold CQZ96_019175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CQZ96_019175 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_019180 PF13411 MerR HTH family regulatory protein CQZ96_019185 PF01979 Amidohydrolase family CQZ96_019195 PF02649 Type I GTP cyclohydrolase folE2 CQZ96_019205 PF02492 CobW/HypB/UreG, nucleotide-binding domain CQZ96_019205 PF07683 Cobalamin synthesis protein cobW C-terminal domain CQZ96_019210 PF00593 TonB dependent receptor CQZ96_019210 PF07660 Secretin and TonB N terminus short domain CQZ96_019210 PF07715 TonB-dependent Receptor Plug Domain CQZ96_019235 PF03466 LysR substrate binding domain CQZ96_019235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_019240 PF05649 Peptidase family M13 CQZ96_019240 PF01431 Peptidase family M13 CQZ96_019260 PF05163 DinB family CQZ96_019290 PF02637 GatB domain CQZ96_019290 PF02934 GatB/GatE catalytic domain CQZ96_019295 PF01425 Amidase CQZ96_019300 PF02686 Glu-tRNAGln amidotransferase C subunit CQZ96_019310 PF04085 rod shape-determining protein MreC CQZ96_019315 PF04093 rod shape-determining protein MreD CQZ96_019320 PF02545 Maf-like protein CQZ96_019325 PF00575 S1 RNA binding domain CQZ96_019325 PF10150 Ribonuclease E/G family CQZ96_019335 PF06974 Protein of unknown function (DUF1298) CQZ96_019335 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CQZ96_019340 PF01507 Phosphoadenosine phosphosulfate reductase family CQZ96_019360 PF13472 GDSL-like Lipase/Acylhydrolase family CQZ96_019365 PF00005 ABC transporter CQZ96_019375 PF01694 Rhomboid family CQZ96_019380 PF00912 Transglycosylase CQZ96_019385 PF17941 Polyphosphate kinase C-terminal domain 1 CQZ96_019385 PF13090 Polyphosphate kinase C-terminal domain 2 CQZ96_019385 PF13089 Polyphosphate kinase N-terminal domain CQZ96_019385 PF02503 Polyphosphate kinase middle domain CQZ96_019390 PF07690 Major Facilitator Superfamily CQZ96_019395 PF03466 LysR substrate binding domain CQZ96_019395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_019400 PF12697 Alpha/beta hydrolase family CQZ96_019405 PF18113 Rubredoxin binding C-terminal domain CQZ96_019405 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_019410 PF00301 Rubredoxin CQZ96_019415 PF00156 Phosphoribosyl transferase domain CQZ96_019435 PF00152 tRNA synthetases class II (D, K and N) CQZ96_019435 PF01336 OB-fold nucleic acid binding domain CQZ96_019440 PF00579 tRNA synthetases class I (W and Y) CQZ96_019445 PF05661 Protein of unknown function (DUF808) CQZ96_019450 PF04228 Putative neutral zinc metallopeptidase CQZ96_019455 PF00999 Sodium/hydrogen exchanger family CQZ96_019460 PF00561 alpha/beta hydrolase fold CQZ96_019465 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CQZ96_019475 PF00378 Enoyl-CoA hydratase/isomerase CQZ96_019480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CQZ96_019495 PF02798 Glutathione S-transferase, N-terminal domain CQZ96_019495 PF14497 Glutathione S-transferase, C-terminal domain CQZ96_019505 PF00324 Amino acid permease CQZ96_019510 PF00132 Bacterial transferase hexapeptide (six repeats) CQZ96_019515 PF04072 Leucine carboxyl methyltransferase CQZ96_019520 PF00593 TonB dependent receptor CQZ96_019520 PF07660 Secretin and TonB N terminus short domain CQZ96_019520 PF07715 TonB-dependent Receptor Plug Domain CQZ96_019525 PF03449 Transcription elongation factor, N-terminal CQZ96_019525 PF01272 Transcription elongation factor, GreA/GreB, C-term CQZ96_019530 PF02142 MGS-like domain CQZ96_019530 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CQZ96_019530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQZ96_019535 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CQZ96_019535 PF00117 Glutamine amidotransferase class-I CQZ96_019550 PF01985 CRS1 / YhbY (CRM) domain CQZ96_019555 PF01728 FtsJ-like methyltransferase CQZ96_019560 PF01434 Peptidase family M41 CQZ96_019560 PF06480 FtsH Extracellular CQZ96_019560 PF17862 AAA+ lid domain CQZ96_019560 PF00004 ATPase family associated with various cellular activities (AAA) CQZ96_019565 PF00809 Pterin binding enzyme CQZ96_019585 PF02540 NAD synthase CQZ96_019585 PF00795 Carbon-nitrogen hydrolase CQZ96_019605 PF00106 short chain dehydrogenase CQZ96_019610 PF00743 Flavin-binding monooxygenase-like CQZ96_019625 PF00557 Metallopeptidase family M24 CQZ96_019625 PF01321 Creatinase/Prolidase N-terminal domain CQZ96_019630 PF00854 POT family CQZ96_019635 PF00285 Citrate synthase, C-terminal domain CQZ96_019640 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CQZ96_019645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CQZ96_019650 PF02910 Fumarate reductase flavoprotein C-term CQZ96_019650 PF00890 FAD binding domain CQZ96_019655 PF13085 2Fe-2S iron-sulfur cluster binding domain CQZ96_019660 PF00676 Dehydrogenase E1 component CQZ96_019660 PF16870 2-oxoglutarate dehydrogenase C-terminal CQZ96_019660 PF02779 Transketolase, pyrimidine binding domain CQZ96_019660 PF16078 2-oxoglutarate dehydrogenase N-terminus CQZ96_019665 PF00364 Biotin-requiring enzyme CQZ96_019665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CQZ96_019665 PF02817 e3 binding domain CQZ96_019670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQZ96_019670 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_019675 PF00549 CoA-ligase CQZ96_019675 PF08442 ATP-grasp domain CQZ96_019680 PF00549 CoA-ligase CQZ96_019680 PF02629 CoA binding domain CQZ96_019705 PF00905 Penicillin binding protein transpeptidase domain CQZ96_019705 PF03717 Penicillin-binding Protein dimerisation domain CQZ96_019720 PF05191 Adenylate kinase, active site lid CQZ96_019730 PF00633 Helix-hairpin-helix motif CQZ96_019730 PF10576 Iron-sulfur binding domain of endonuclease III CQZ96_019730 PF00730 HhH-GPD superfamily base excision DNA repair protein CQZ96_019735 PF04060 Putative Fe-S cluster CQZ96_019740 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CQZ96_019740 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CQZ96_019755 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CQZ96_019760 PF02590 Predicted SPOUT methyltransferase CQZ96_019765 PF04389 Peptidase family M28 CQZ96_019770 PF00589 Phage integrase family CQZ96_019770 PF02899 Phage integrase, N-terminal SAM-like domain CQZ96_019780 PF13302 Acetyltransferase (GNAT) domain CQZ96_019785 PF13302 Acetyltransferase (GNAT) domain CQZ96_019790 PF01037 Lrp/AsnC ligand binding domain CQZ96_019795 PF01810 LysE type translocator CQZ96_019800 PF01012 Electron transfer flavoprotein domain CQZ96_019805 PF00766 Electron transfer flavoprotein FAD-binding domain CQZ96_019805 PF01012 Electron transfer flavoprotein domain CQZ96_019815 PF03989 DNA gyrase C-terminal domain, beta-propeller CQZ96_019815 PF00521 DNA gyrase/topoisomerase IV, subunit A CQZ96_019820 PF01784 NIF3 (NGG1p interacting factor 3) CQZ96_019825 PF00881 Nitroreductase family CQZ96_019830 PF00378 Enoyl-CoA hydratase/isomerase CQZ96_019835 PF00293 NUDIX domain CQZ96_019835 PF01467 Cytidylyltransferase-like CQZ96_019840 PF04264 YceI-like domain CQZ96_019845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_019845 PF03466 LysR substrate binding domain CQZ96_019850 PF02798 Glutathione S-transferase, N-terminal domain CQZ96_019850 PF00043 Glutathione S-transferase, C-terminal domain CQZ96_019855 PF01361 Tautomerase enzyme CQZ96_019865 PF03466 LysR substrate binding domain CQZ96_019865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_019875 PF00578 AhpC/TSA family CQZ96_019890 PF06508 Queuosine biosynthesis protein QueC CQZ96_019895 PF04055 Radical SAM superfamily CQZ96_019900 PF14602 Hexapeptide repeat of succinyl-transferase CQZ96_019900 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CQZ96_019900 PF00132 Bacterial transferase hexapeptide (six repeats) CQZ96_019915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_019915 PF03466 LysR substrate binding domain CQZ96_019920 PF00005 ABC transporter CQZ96_019920 PF12857 TOBE-like domain CQZ96_019925 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_019930 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_019950 PF02618 YceG-like family CQZ96_019955 PF02223 Thymidylate kinase CQZ96_019980 PF12833 Helix-turn-helix domain CQZ96_019980 PF12852 Cupin CQZ96_019985 PF00890 FAD binding domain CQZ96_019985 PF02910 Fumarate reductase flavoprotein C-term CQZ96_019990 PF13180 PDZ domain CQZ96_020005 PF12833 Helix-turn-helix domain CQZ96_020010 PF03009 Glycerophosphoryl diester phosphodiesterase family CQZ96_020015 PF12951 Passenger-associated-transport-repeat CQZ96_020015 PF00082 Subtilase family CQZ96_020015 PF03797 Autotransporter beta-domain CQZ96_020035 PF12852 Cupin CQZ96_020035 PF12833 Helix-turn-helix domain CQZ96_020040 PF03280 Proteobacterial lipase chaperone protein CQZ96_020050 PF00392 Bacterial regulatory proteins, gntR family CQZ96_020050 PF00155 Aminotransferase class I and II CQZ96_020055 PF00117 Glutamine amidotransferase class-I CQZ96_020055 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CQZ96_020065 PF01168 Alanine racemase, N-terminal domain CQZ96_020080 PF02798 Glutathione S-transferase, N-terminal domain CQZ96_020080 PF00043 Glutathione S-transferase, C-terminal domain CQZ96_020085 PF00106 short chain dehydrogenase CQZ96_020095 PF08281 Sigma-70, region 4 CQZ96_020095 PF04542 Sigma-70 region 2 CQZ96_020100 PF00009 Elongation factor Tu GTP binding domain CQZ96_020100 PF03144 Elongation factor Tu domain 2 CQZ96_020100 PF06421 GTP-binding protein LepA C-terminus CQZ96_020100 PF00679 Elongation factor G C-terminus CQZ96_020105 PF10502 Signal peptidase, peptidase S26 CQZ96_020115 PF14622 Ribonuclease-III-like CQZ96_020115 PF00035 Double-stranded RNA binding motif CQZ96_020120 PF07650 KH domain CQZ96_020120 PF01926 50S ribosome-binding GTPase CQZ96_020130 PF02565 Recombination protein O C terminal CQZ96_020130 PF11967 Recombination protein O N terminal CQZ96_020135 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CQZ96_020140 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CQZ96_020145 PF00248 Aldo/keto reductase family CQZ96_020160 PF03466 LysR substrate binding domain CQZ96_020160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_020175 PF03441 FAD binding domain of DNA photolyase CQZ96_020175 PF00875 DNA photolyase CQZ96_020180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CQZ96_020185 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_020190 PF00768 D-alanyl-D-alanine carboxypeptidase CQZ96_020190 PF07943 Penicillin-binding protein 5, C-terminal domain CQZ96_020200 PF00576 HIUase/Transthyretin family CQZ96_020215 PF04055 Radical SAM superfamily CQZ96_020220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQZ96_020220 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_020225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CQZ96_020225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQZ96_020225 PF11890 Domain of unknown function (DUF3410) CQZ96_020230 PF00152 tRNA synthetases class II (D, K and N) CQZ96_020245 PF01743 Poly A polymerase head domain CQZ96_020245 PF12627 Probable RNA and SrmB- binding site of polymerase A CQZ96_020250 PF03949 Malic enzyme, NAD binding domain CQZ96_020250 PF00390 Malic enzyme, N-terminal domain CQZ96_020250 PF01515 Phosphate acetyl/butaryl transferase CQZ96_020255 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_020255 PF00563 EAL domain CQZ96_020255 PF03707 Bacterial signalling protein N terminal repeat CQZ96_020260 PF04452 RNA methyltransferase CQZ96_020265 PF02219 Methylenetetrahydrofolate reductase CQZ96_020270 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CQZ96_020270 PF05221 S-adenosyl-L-homocysteine hydrolase CQZ96_020315 PF09317 Domain of unknown function (DUF1974) CQZ96_020315 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_020315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_020315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_020320 PF03971 Monomeric isocitrate dehydrogenase CQZ96_020325 PF00849 RNA pseudouridylate synthase CQZ96_020330 PF00083 Sugar (and other) transporter CQZ96_020335 PF00180 Isocitrate/isopropylmalate dehydrogenase CQZ96_020355 PF00764 Arginosuccinate synthase CQZ96_020360 PF03466 LysR substrate binding domain CQZ96_020360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_020365 PF00892 EamA-like transporter family CQZ96_020370 PF02652 L-lactate permease CQZ96_020375 PF00392 Bacterial regulatory proteins, gntR family CQZ96_020375 PF07729 FCD domain CQZ96_020380 PF01070 FMN-dependent dehydrogenase CQZ96_020385 PF09330 D-lactate dehydrogenase, membrane binding CQZ96_020385 PF01565 FAD binding domain CQZ96_020395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CQZ96_020395 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_020410 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CQZ96_020410 PF08479 POTRA domain, ShlB-type CQZ96_020410 PF17287 POTRA domain CQZ96_020415 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain CQZ96_020415 PF13018 Extended Signal Peptide of Type V secretion system CQZ96_020415 PF13332 Hemagglutinin repeat CQZ96_020415 PF05594 Haemagluttinin repeat CQZ96_020415 PF05860 haemagglutination activity domain CQZ96_020425 PF11008 Protein of unknown function (DUF2846) CQZ96_020460 PF07690 Major Facilitator Superfamily CQZ96_020475 PF00171 Aldehyde dehydrogenase family CQZ96_020480 PF00465 Iron-containing alcohol dehydrogenase CQZ96_020485 PF00775 Dioxygenase CQZ96_020485 PF04444 Catechol dioxygenase N terminus CQZ96_020495 PF00884 Sulfatase CQZ96_020500 PF03781 Sulfatase-modifying factor enzyme 1 CQZ96_020515 PF01144 Coenzyme A transferase CQZ96_020520 PF01144 Coenzyme A transferase CQZ96_020525 PF00108 Thiolase, N-terminal domain CQZ96_020525 PF02803 Thiolase, C-terminal domain CQZ96_020530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_020530 PF03466 LysR substrate binding domain CQZ96_020535 PF07715 TonB-dependent Receptor Plug Domain CQZ96_020535 PF00593 TonB dependent receptor CQZ96_020560 PF00392 Bacterial regulatory proteins, gntR family CQZ96_020560 PF07702 UTRA domain CQZ96_020570 PF12857 TOBE-like domain CQZ96_020570 PF17850 CysA C-terminal regulatory domain CQZ96_020570 PF00005 ABC transporter CQZ96_020575 PF00528 Binding-protein-dependent transport system inner membrane component CQZ96_020580 PF01266 FAD dependent oxidoreductase CQZ96_020585 PF00266 Aminotransferase class-V CQZ96_020590 PF13419 Haloacid dehalogenase-like hydrolase CQZ96_020600 PF05992 SbmA/BacA-like family CQZ96_020605 PF00561 alpha/beta hydrolase fold CQZ96_020610 PF00916 Sulfate permease family CQZ96_020610 PF01740 STAS domain CQZ96_020615 PF03707 Bacterial signalling protein N terminal repeat CQZ96_020615 PF00990 Diguanylate cyclase, GGDEF domain CQZ96_020615 PF00563 EAL domain CQZ96_020620 PF00107 Zinc-binding dehydrogenase CQZ96_020620 PF08240 Alcohol dehydrogenase GroES-like domain CQZ96_020625 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CQZ96_020630 PF05853 beta-keto acid cleavage enzyme CQZ96_020635 PF07690 Major Facilitator Superfamily CQZ96_020650 PF03601 Conserved hypothetical protein 698 CQZ96_020700 PF13953 PapC C-terminal domain CQZ96_020700 PF00577 Outer membrane usher protein CQZ96_020700 PF13954 PapC N-terminal domain CQZ96_020710 PF00239 Resolvase, N terminal domain CQZ96_020710 PF02796 Helix-turn-helix domain of resolvase CQZ96_020715 PF00171 Aldehyde dehydrogenase family CQZ96_020720 PF00465 Iron-containing alcohol dehydrogenase CQZ96_020730 PF01614 Bacterial transcriptional regulator CQZ96_020730 PF09339 IclR helix-turn-helix domain CQZ96_020735 PF00324 Amino acid permease CQZ96_020740 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CQZ96_020750 PF12833 Helix-turn-helix domain CQZ96_020750 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CQZ96_020755 PF00106 short chain dehydrogenase CQZ96_020760 PF06314 Acetoacetate decarboxylase (ADC) CQZ96_020770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CQZ96_020770 PF07992 Pyridine nucleotide-disulphide oxidoreductase CQZ96_020800 PF00753 Metallo-beta-lactamase superfamily CQZ96_020800 PF14864 Alkyl sulfatase C-terminal CQZ96_020800 PF14863 Alkyl sulfatase dimerisation CQZ96_020805 PF08361 MAATS-type transcriptional repressor, C-terminal region CQZ96_020805 PF00440 Bacterial regulatory proteins, tetR family CQZ96_020810 PF07690 Major Facilitator Superfamily CQZ96_020815 PF01126 Heme oxygenase CQZ96_020860 PF00593 TonB dependent receptor CQZ96_020860 PF07715 TonB-dependent Receptor Plug Domain CQZ96_020870 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CQZ96_020870 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CQZ96_020875 PF01613 Flavin reductase like domain CQZ96_020885 PF03737 Aldolase/RraA CQZ96_020895 PF00171 Aldehyde dehydrogenase family CQZ96_020900 PF01042 Endoribonuclease L-PSP CQZ96_020905 PF01557 Fumarylacetoacetate (FAA) hydrolase family CQZ96_020915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_020915 PF03466 LysR substrate binding domain CQZ96_020945 PF07715 TonB-dependent Receptor Plug Domain CQZ96_020945 PF00593 TonB dependent receptor CQZ96_020950 PF02219 Methylenetetrahydrofolate reductase CQZ96_020955 PF02677 Epoxyqueuosine reductase QueH CQZ96_020960 PF03466 LysR substrate binding domain CQZ96_020960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_020975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CQZ96_020975 PF02785 Biotin carboxylase C-terminal domain CQZ96_020975 PF00289 Biotin carboxylase, N-terminal domain CQZ96_020980 PF01402 Ribbon-helix-helix protein, copG family CQZ96_020980 PF08753 NikR C terminal nickel binding domain CQZ96_020985 PF01425 Amidase CQZ96_020990 PF00497 Bacterial extracellular solute-binding proteins, family 3 CQZ96_020995 PF00893 Small Multidrug Resistance protein CQZ96_021010 PF00005 ABC transporter CQZ96_021025 PF00717 Peptidase S24-like CQZ96_021030 PF12697 Alpha/beta hydrolase family CQZ96_021035 PF00296 Luciferase-like monooxygenase CQZ96_021040 PF00857 Isochorismatase family CQZ96_021045 PF01042 Endoribonuclease L-PSP CQZ96_021050 PF01613 Flavin reductase like domain CQZ96_021055 PF00860 Permease family CQZ96_021065 PF00596 Class II Aldolase and Adducin N-terminal domain CQZ96_021070 PF17954 Quercetinase C-terminal cupin domain CQZ96_021070 PF02678 Pirin CQZ96_021080 PF01208 Uroporphyrinogen decarboxylase (URO-D) CQZ96_021085 PF05675 Protein of unknown function (DUF817) CQZ96_021105 PF13520 Amino acid permease CQZ96_021110 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CQZ96_021115 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CQZ96_021145 PF00218 Indole-3-glycerol phosphate synthase CQZ96_021150 PF00591 Glycosyl transferase family, a/b domain CQZ96_021150 PF02885 Glycosyl transferase family, helical bundle domain CQZ96_021155 PF00117 Glutamine amidotransferase class-I CQZ96_021170 PF03974 Ecotin CQZ96_021225 PF13356 Arm DNA-binding domain CQZ96_021225 PF00589 Phage integrase family CQZ96_021260 PF00120 Glutamine synthetase, catalytic domain CQZ96_021260 PF03951 Glutamine synthetase, beta-Grasp domain CQZ96_021280 PF08032 RNA 2'-O ribose methyltransferase substrate binding CQZ96_021280 PF00588 SpoU rRNA Methylase family CQZ96_021285 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CQZ96_021300 PF00691 OmpA family CQZ96_021305 PF07676 WD40-like Beta Propeller Repeat CQZ96_021305 PF04052 TolB amino-terminal domain CQZ96_021320 PF02472 Biopolymer transport protein ExbD/TolR CQZ96_021325 PF01618 MotA/TolQ/ExbB proton channel family CQZ96_021330 PF03061 Thioesterase superfamily CQZ96_021360 PF02667 Short chain fatty acid transporter CQZ96_021365 PF07715 TonB-dependent Receptor Plug Domain CQZ96_021365 PF00593 TonB dependent receptor CQZ96_021370 PF17864 RuvB AAA lid domain CQZ96_021370 PF05491 RuvB C-terminal winged helix domain CQZ96_021370 PF05496 Holliday junction DNA helicase RuvB P-loop domain CQZ96_021375 PF07499 RuvA, C-terminal domain CQZ96_021375 PF01330 RuvA N terminal domain CQZ96_021385 PF01966 HD domain CQZ96_021395 PF02769 AIR synthase related protein, C-terminal domain CQZ96_021395 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CQZ96_021395 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CQZ96_021415 PF00375 Sodium:dicarboxylate symporter family CQZ96_021430 PF13533 Biotin-lipoyl like CQZ96_021455 PF00266 Aminotransferase class-V CQZ96_021465 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CQZ96_021475 PF00296 Luciferase-like monooxygenase CQZ96_021480 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_021480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_021485 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CQZ96_021485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CQZ96_021485 PF02770 Acyl-CoA dehydrogenase, middle domain CQZ96_021495 PF03466 LysR substrate binding domain CQZ96_021495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CQZ96_021500 PF00440 Bacterial regulatory proteins, tetR family CQZ96_021500 PF08360 QacR-like protein, C-terminal region CQZ96_021505 PF01406 tRNA synthetases class I (C) catalytic domain CQZ96_021505 PF09190 DALR domain CQZ96_021510 PF00571 CBS domain CQZ96_021510 PF01380 SIS domain CQZ96_021525 PF03968 OstA-like protein CQZ96_021530 PF12399 Branched-chain amino acid ATP-binding cassette transporter CQZ96_021530 PF00005 ABC transporter