locus-tag class description A3K93_00005 PF09308 LuxQ, periplasmic A3K93_00005 PF00072 Response regulator receiver domain A3K93_00005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_00005 PF00512 His Kinase A (phospho-acceptor) domain A3K93_00010 PF00072 Response regulator receiver domain A3K93_00010 PF00990 Diguanylate cyclase, GGDEF domain A3K93_00055 PF02683 Cytochrome C biogenesis protein transmembrane region A3K93_00055 PF11412 Disulphide bond corrector protein DsbC A3K93_00060 PF17151 Periplasmic sensor domain A3K93_00060 PF00990 Diguanylate cyclase, GGDEF domain A3K93_00065 PF07859 alpha/beta hydrolase fold A3K93_00075 PF03960 ArsC family A3K93_00080 PF03372 Endonuclease/Exonuclease/phosphatase family A3K93_00085 PF00156 Phosphoribosyl transferase domain A3K93_00100 PF00313 'Cold-shock' DNA-binding domain A3K93_00115 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain A3K93_00115 PF02951 Prokaryotic glutathione synthetase, N-terminal domain A3K93_00120 PF04101 Glycosyltransferase family 28 C-terminal domain A3K93_00120 PF03033 Glycosyltransferase family 28 N-terminal domain A3K93_00125 PF08245 Mur ligase middle domain A3K93_00125 PF01225 Mur ligase family, catalytic domain A3K93_00125 PF02875 Mur ligase family, glutamate ligase domain A3K93_00130 PF07478 D-ala D-ala ligase C-terminus A3K93_00130 PF01820 D-ala D-ala ligase N-terminus A3K93_00135 PF03799 Cell division protein FtsQ A3K93_00135 PF08478 POTRA domain, FtsQ-type A3K93_00140 PF02491 SHS2 domain inserted in FTSA A3K93_00145 PF12327 FtsZ family, C-terminal domain A3K93_00145 PF00091 Tubulin/FtsZ family, GTPase domain A3K93_00150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase A3K93_00165 PF00456 Transketolase, thiamine diphosphate binding domain A3K93_00165 PF17831 Pyruvate dehydrogenase E1 component middle domain A3K93_00170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A3K93_00170 PF00364 Biotin-requiring enzyme A3K93_00170 PF02817 e3 binding domain A3K93_00175 PF01169 Uncharacterized protein family UPF0016 A3K93_00180 PF00258 Flavodoxin A3K93_00180 PF01613 Flavin reductase like domain A3K93_00185 PF03692 Putative zinc- or iron-chelating domain A3K93_00195 PF12323 Helix-turn-helix domain A3K93_00195 PF07282 Putative transposase DNA-binding domain A3K93_00195 PF01385 Probable transposase A3K93_00205 PF00478 IMP dehydrogenase / GMP reductase domain A3K93_00205 PF00571 CBS domain A3K93_00210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A3K93_00210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A3K93_00210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A3K93_00210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A3K93_00215 PF01243 Pyridoxamine 5'-phosphate oxidase A3K93_00215 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region A3K93_00220 PF01368 DHH family A3K93_00220 PF17768 RecJ OB domain A3K93_00220 PF02272 DHHA1 domain A3K93_00235 PF03462 PCRF domain A3K93_00235 PF00472 RF-1 domain A3K93_00245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A3K93_00250 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) A3K93_00255 PF04452 RNA methyltransferase A3K93_00260 PF00924 Mechanosensitive ion channel A3K93_00265 PF00501 AMP-binding enzyme A3K93_00265 PF16177 Acetyl-coenzyme A synthetase N-terminus A3K93_00265 PF13193 AMP-binding enzyme C-terminal domain A3K93_00270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A3K93_00270 PF08028 Acyl-CoA dehydrogenase, C-terminal domain A3K93_00285 PF07282 Putative transposase DNA-binding domain A3K93_00285 PF12323 Helix-turn-helix domain A3K93_00285 PF01385 Probable transposase A3K93_00290 PF03441 FAD binding domain of DNA photolyase A3K93_00290 PF00875 DNA photolyase A3K93_00295 PF00677 Lumazine binding domain A3K93_00300 PF00296 Luciferase-like monooxygenase A3K93_00305 PF03358 NADPH-dependent FMN reductase A3K93_00310 PF00196 Bacterial regulatory proteins, luxR family A3K93_00310 PF00072 Response regulator receiver domain A3K93_00320 PF00072 Response regulator receiver domain A3K93_00320 PF09308 LuxQ, periplasmic A3K93_00320 PF00512 His Kinase A (phospho-acceptor) domain A3K93_00320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_00325 PF04341 Protein of unknown function, DUF485 A3K93_00330 PF00474 Sodium:solute symporter family A3K93_00345 PF00990 Diguanylate cyclase, GGDEF domain A3K93_00345 PF17158 Membrane-associated sensor, integral membrane domain A3K93_00355 PF17755 UvrA DNA-binding domain A3K93_00355 PF17760 UvrA interaction domain A3K93_00365 PF07690 Major Facilitator Superfamily A3K93_00370 PF00436 Single-strand binding protein family A3K93_00375 PF10417 C-terminal domain of 1-Cys peroxiredoxin A3K93_00375 PF00578 AhpC/TSA family A3K93_00380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_00380 PF03466 LysR substrate binding domain A3K93_00390 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A3K93_00390 PF01348 Type II intron maturase A3K93_00410 PF02678 Pirin A3K93_00410 PF05726 Pirin C-terminal cupin domain A3K93_00415 PF01593 Flavin containing amine oxidoreductase A3K93_00445 PF02705 K+ potassium transporter A3K93_00465 PF13936 Helix-turn-helix domain A3K93_00465 PF00665 Integrase core domain A3K93_00485 PF01381 Helix-turn-helix A3K93_00490 PF13340 Putative transposase of IS4/5 family (DUF4096) A3K93_00500 PF00665 Integrase core domain A3K93_00500 PF13333 Integrase core domain A3K93_00500 PF13276 HTH-like domain A3K93_00505 PF01527 Transposase A3K93_00510 PF13737 Transposase DDE domain A3K93_00525 PF07282 Putative transposase DNA-binding domain A3K93_00525 PF01385 Probable transposase A3K93_00525 PF12323 Helix-turn-helix domain A3K93_00530 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term A3K93_00530 PF12833 Helix-turn-helix domain A3K93_00540 PF00977 Histidine biosynthesis protein A3K93_00545 PF01636 Phosphotransferase enzyme family A3K93_00565 PF00324 Amino acid permease A3K93_00570 PF01266 FAD dependent oxidoreductase A3K93_00575 PF00892 EamA-like transporter family A3K93_00580 PF00977 Histidine biosynthesis protein A3K93_00600 PF00117 Glutamine amidotransferase class-I A3K93_00605 PF00475 Imidazoleglycerol-phosphate dehydratase A3K93_00640 PF03848 Tellurite resistance protein TehB A3K93_00640 PF09313 Domain of unknown function (DUF1971) A3K93_00655 PF00108 Thiolase, N-terminal domain A3K93_00655 PF02803 Thiolase, C-terminal domain A3K93_00660 PF00378 Enoyl-CoA hydratase/isomerase A3K93_00660 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A3K93_00660 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A3K93_00665 PF00990 Diguanylate cyclase, GGDEF domain A3K93_00675 PF10431 C-terminal, D2-small domain, of ClpB protein A3K93_00675 PF07724 AAA domain (Cdc48 subfamily) A3K93_00680 PF01541 GIY-YIG catalytic domain A3K93_00680 PF02151 UvrB/uvrC motif A3K93_00680 PF08459 UvrC Helix-hairpin-helix N-terminal A3K93_00690 PF01066 CDP-alcohol phosphatidyltransferase A3K93_00695 PF04362 Bacterial Fe(2+) trafficking A3K93_00700 PF14698 Argininosuccinate lyase C-terminal A3K93_00700 PF00206 Lyase A3K93_00705 PF06580 Histidine kinase A3K93_00705 PF07694 5TMR of 5TMR-LYT A3K93_00710 PF00072 Response regulator receiver domain A3K93_00710 PF04397 LytTr DNA-binding domain A3K93_00715 PF03900 Porphobilinogen deaminase, C-terminal domain A3K93_00715 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A3K93_00740 PF00816 H-NS histone family A3K93_00755 PF03958 Bacterial type II/III secretion system short domain A3K93_00755 PF00263 Bacterial type II and III secretion system protein A3K93_00760 PF16697 Inner membrane component of T3SS, cytoplasmic domain A3K93_00765 PF13419 Haloacid dehalogenase-like hydrolase A3K93_00770 PF04715 Anthranilate synthase component I, N terminal region A3K93_00770 PF00425 chorismate binding enzyme A3K93_00795 PF03143 Elongation factor Tu C-terminal domain A3K93_00795 PF03144 Elongation factor Tu domain 2 A3K93_00795 PF00009 Elongation factor Tu GTP binding domain A3K93_00805 PF00584 SecE/Sec61-gamma subunits of protein translocation complex A3K93_00810 PF02357 Transcription termination factor nusG A3K93_00810 PF00467 KOW motif A3K93_00815 PF03946 Ribosomal protein L11, N-terminal domain A3K93_00815 PF00298 Ribosomal protein L11, RNA binding domain A3K93_00820 PF00687 Ribosomal protein L1p/L10e family A3K93_00825 PF00466 Ribosomal protein L10 A3K93_00830 PF16320 Ribosomal protein L7/L12 dimerisation domain A3K93_00830 PF00542 Ribosomal protein L7/L12 C-terminal domain A3K93_00835 PF00562 RNA polymerase Rpb2, domain 6 A3K93_00835 PF04560 RNA polymerase Rpb2, domain 7 A3K93_00835 PF04563 RNA polymerase beta subunit A3K93_00835 PF10385 RNA polymerase beta subunit external 1 domain A3K93_00835 PF04561 RNA polymerase Rpb2, domain 2 A3K93_00835 PF04565 RNA polymerase Rpb2, domain 3 A3K93_00840 PF00623 RNA polymerase Rpb1, domain 2 A3K93_00840 PF04997 RNA polymerase Rpb1, domain 1 A3K93_00840 PF04983 RNA polymerase Rpb1, domain 3 A3K93_00840 PF05000 RNA polymerase Rpb1, domain 4 A3K93_00840 PF04998 RNA polymerase Rpb1, domain 5 A3K93_00865 PF03553 Na+/H+ antiporter family A3K93_00865 PF13726 Na+-H+ antiporter family A3K93_00880 PF00183 Hsp90 protein A3K93_00880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_00905 PF01323 DSBA-like thioredoxin domain A3K93_00915 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain A3K93_00915 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain A3K93_00920 PF00512 His Kinase A (phospho-acceptor) domain A3K93_00920 PF00672 HAMP domain A3K93_00920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_00925 PF00072 Response regulator receiver domain A3K93_00925 PF00486 Transcriptional regulatory protein, C terminal A3K93_00930 PF16921 Tex protein YqgF-like domain A3K93_00930 PF09371 Tex-like protein N-terminal domain A3K93_00930 PF00575 S1 RNA binding domain A3K93_00930 PF17674 HHH domain A3K93_00940 PF01609 Transposase DDE domain A3K93_00940 PF13006 Insertion element 4 transposase N-terminal A3K93_00975 PF03109 ABC1 family A3K93_00985 PF01209 ubiE/COQ5 methyltransferase family A3K93_00995 PF03976 Polyphosphate kinase 2 (PPK2) A3K93_01005 PF17946 RecC C-terminal domain A3K93_01010 PF12705 PD-(D/E)XK nuclease superfamily A3K93_01010 PF13361 UvrD-like helicase C-terminal domain A3K93_01010 PF00580 UvrD/REP helicase N-terminal domain A3K93_01015 PF13538 UvrD-like helicase C-terminal domain A3K93_01020 PF00312 Ribosomal protein S15 A3K93_01025 PF01138 3' exoribonuclease family, domain 1 A3K93_01025 PF00575 S1 RNA binding domain A3K93_01025 PF03725 3' exoribonuclease family, domain 2 A3K93_01025 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A3K93_01025 PF00013 KH domain A3K93_01030 PF00593 TonB dependent receptor A3K93_01030 PF07715 TonB-dependent Receptor Plug Domain A3K93_01035 PF04325 Protein of unknown function (DUF465) A3K93_01045 PF01430 Hsp33 protein A3K93_01050 PF02254 TrkA-N domain A3K93_01050 PF00999 Sodium/hydrogen exchanger family A3K93_01055 PF18074 Primosomal protein N C-terminal domain A3K93_01055 PF00270 DEAD/DEAH box helicase A3K93_01055 PF17764 3′ DNA-binding domain (3′BD) A3K93_01055 PF00271 Helicase conserved C-terminal domain A3K93_01055 PF18319 PriA DNA helicase Cys-rich region (CRR) domain A3K93_01060 PF00482 Type II secretion system (T2SS), protein F A3K93_01065 PF08334 Type II secretion system (T2SS), protein G A3K93_01065 PF07963 Prokaryotic N-terminal methylation motif A3K93_01075 PF00795 Carbon-nitrogen hydrolase A3K93_01080 PF03471 Transporter associated domain A3K93_01080 PF00571 CBS domain A3K93_01085 PF01206 Sulfurtransferase TusA A3K93_01100 PF01177 Asp/Glu/Hydantoin racemase A3K93_01110 PF00762 Ferrochelatase A3K93_01115 PF00753 Metallo-beta-lactamase superfamily A3K93_01120 PF03884 DNA gyrase inhibitor YacG A3K93_01130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A3K93_01130 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_01140 PF08241 Methyltransferase domain A3K93_01155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A3K93_01155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A3K93_01180 PF02092 Glycyl-tRNA synthetase beta subunit A3K93_01180 PF05746 DALR anticodon binding domain A3K93_01185 PF02091 Glycyl-tRNA synthetase alpha subunit A3K93_01190 PF00571 CBS domain A3K93_01195 PF00939 Sodium:sulfate symporter transmembrane region A3K93_01205 PF04024 PspC domain A3K93_01235 PF13193 AMP-binding enzyme C-terminal domain A3K93_01235 PF00501 AMP-binding enzyme A3K93_01240 PF00575 S1 RNA binding domain A3K93_01240 PF10150 Ribonuclease E/G family A3K93_01240 PF12111 Polyribonucleotide phosphorylase C terminal A3K93_01245 PF00849 RNA pseudouridylate synthase A3K93_01245 PF01479 S4 domain A3K93_01250 PF13419 Haloacid dehalogenase-like hydrolase A3K93_01255 PF01557 Fumarylacetoacetate (FAA) hydrolase family A3K93_01260 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation A3K93_01260 PF01118 Semialdehyde dehydrogenase, NAD binding domain A3K93_01265 PF07836 DmpG-like communication domain A3K93_01265 PF00682 HMGL-like A3K93_01270 PF01609 Transposase DDE domain A3K93_01270 PF13006 Insertion element 4 transposase N-terminal A3K93_01275 PF03573 outer membrane porin, OprD family A3K93_01280 PF00561 alpha/beta hydrolase fold A3K93_01285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_01285 PF03466 LysR substrate binding domain A3K93_01290 PF00848 Ring hydroxylating alpha subunit (catalytic domain) A3K93_01290 PF00355 Rieske [2Fe-2S] domain A3K93_01295 PF00866 Ring hydroxylating beta subunit A3K93_01300 PF00355 Rieske [2Fe-2S] domain A3K93_01305 PF00106 short chain dehydrogenase A3K93_01310 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase A3K93_01315 PF14759 Reductase C-terminal A3K93_01315 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_01325 PF01545 Cation efflux family A3K93_01325 PF16916 Dimerisation domain of Zinc Transporter A3K93_01330 PF06628 Catalase-related immune-responsive A3K93_01330 PF00199 Catalase A3K93_01340 PF01590 GAF domain A3K93_01340 PF05524 PEP-utilising enzyme, N-terminal A3K93_01340 PF00391 PEP-utilising enzyme, mobile domain A3K93_01340 PF02896 PEP-utilising enzyme, TIM barrel domain A3K93_01345 PF00293 NUDIX domain A3K93_01365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_01365 PF03466 LysR substrate binding domain A3K93_01375 PF00330 Aconitase family (aconitate hydratase) A3K93_01380 PF00694 Aconitase C-terminal domain A3K93_01390 PF00180 Isocitrate/isopropylmalate dehydrogenase A3K93_01400 PF01176 Translation initiation factor 1A / IF-1 A3K93_01410 PF01416 tRNA pseudouridine synthase A3K93_01430 PF01118 Semialdehyde dehydrogenase, NAD binding domain A3K93_01430 PF02774 Semialdehyde dehydrogenase, dimerisation domain A3K93_01440 PF03279 Bacterial lipid A biosynthesis acyltransferase A3K93_01450 PF04102 SlyX A3K93_01470 PF08272 Topoisomerase I zinc-ribbon-like A3K93_01470 PF01396 Topoisomerase DNA binding C4 zinc finger A3K93_01470 PF01751 Toprim domain A3K93_01470 PF01131 DNA topoisomerase A3K93_01480 PF13361 UvrD-like helicase C-terminal domain A3K93_01480 PF00580 UvrD/REP helicase N-terminal domain A3K93_01485 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) A3K93_01500 PF00999 Sodium/hydrogen exchanger family A3K93_01500 PF02254 TrkA-N domain A3K93_01505 PF00471 Ribosomal protein L33 A3K93_01510 PF00830 Ribosomal L28 family A3K93_01515 PF00171 Aldehyde dehydrogenase family A3K93_01520 PF08360 QacR-like protein, C-terminal region A3K93_01520 PF00440 Bacterial regulatory proteins, tetR family A3K93_01525 PF01842 ACT domain A3K93_01525 PF00551 Formyl transferase A3K93_01535 PF01618 MotA/TolQ/ExbB proton channel family A3K93_01545 PF01625 Peptide methionine sulfoxide reductase A3K93_01560 PF00186 Dihydrofolate reductase A3K93_01565 PF00303 Thymidylate synthase A3K93_01570 PF08212 Lipocalin-like domain A3K93_01585 PF01790 Prolipoprotein diacylglyceryl transferase A3K93_01600 PF01725 Ham1 family A3K93_01610 PF00561 alpha/beta hydrolase fold A3K93_01610 PF07021 Methionine biosynthesis protein MetW A3K93_01615 PF00561 alpha/beta hydrolase fold A3K93_01620 PF00682 HMGL-like A3K93_01620 PF08502 LeuA allosteric (dimerisation) domain A3K93_01625 PF18331 PKHD-type hydroxylase C-terminal domain A3K93_01625 PF13640 2OG-Fe(II) oxygenase superfamily A3K93_01630 PF07715 TonB-dependent Receptor Plug Domain A3K93_01630 PF00593 TonB dependent receptor A3K93_01635 PF05698 Bacterial trigger factor protein (TF) C-terminus A3K93_01635 PF05697 Bacterial trigger factor protein (TF) A3K93_01635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A3K93_01640 PF00574 Clp protease A3K93_01645 PF10431 C-terminal, D2-small domain, of ClpB protein A3K93_01645 PF07724 AAA domain (Cdc48 subfamily) A3K93_01645 PF06689 ClpX C4-type zinc finger A3K93_01655 PF05681 Fumarate hydratase (Fumerase) A3K93_01655 PF05683 Fumarase C-terminus A3K93_01660 PF07085 DRTGG domain A3K93_01660 PF01515 Phosphate acetyl/butaryl transferase A3K93_01665 PF00871 Acetokinase family A3K93_01670 PF00171 Aldehyde dehydrogenase family A3K93_01685 PF00933 Glycosyl hydrolase family 3 N terminal domain A3K93_01690 PF11818 C-terminal domain of tail specific protease (DUF3340) A3K93_01690 PF03572 Peptidase family S41 A3K93_01690 PF00595 PDZ domain A3K93_01690 PF17804 Tail specific protease N-terminal domain A3K93_01695 PF03707 Bacterial signalling protein N terminal repeat A3K93_01695 PF00990 Diguanylate cyclase, GGDEF domain A3K93_01695 PF00563 EAL domain A3K93_01700 PF03144 Elongation factor Tu domain 2 A3K93_01700 PF16658 Class II release factor RF3, C-terminal domain A3K93_01700 PF00009 Elongation factor Tu GTP binding domain A3K93_01715 PF01026 TatD related DNase A3K93_01725 PF02556 Preprotein translocase subunit SecB A3K93_01730 PF00462 Glutaredoxin A3K93_01740 PF03193 RsgA GTPase A3K93_01745 PF00929 Exonuclease A3K93_01750 PF00899 ThiF family A3K93_01760 PF02321 Outer membrane efflux protein A3K93_01765 PF12704 MacB-like periplasmic core domain A3K93_01765 PF00005 ABC transporter A3K93_01765 PF02687 FtsX-like permease family A3K93_01770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A3K93_01785 PF08264 Anticodon-binding domain of tRNA A3K93_01785 PF09334 tRNA synthetases class I (M) A3K93_01785 PF13603 Leucyl-tRNA synthetase, Domain 2 A3K93_01785 PF00133 tRNA synthetases class I (I, L, M and V) A3K93_01795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A3K93_01795 PF00205 Thiamine pyrophosphate enzyme, central domain A3K93_01795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A3K93_01800 PF10369 Small subunit of acetolactate synthase A3K93_01805 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain A3K93_01805 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A3K93_01820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_01820 PF07730 Histidine kinase A3K93_01820 PF00672 HAMP domain A3K93_01825 PF04384 Iron-sulphur cluster assembly A3K93_01830 PF00334 Nucleoside diphosphate kinase A3K93_01835 PF04055 Radical SAM superfamily A3K93_01845 PF13464 Domain of unknown function (DUF4115) A3K93_01850 PF04551 GcpE protein A3K93_01855 PF03129 Anticodon binding domain A3K93_01855 PF13393 Histidyl-tRNA synthetase A3K93_01865 PF13360 PQQ-like domain A3K93_01865 PF01011 PQQ enzyme repeat A3K93_01870 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A3K93_01870 PF01926 50S ribosome-binding GTPase A3K93_01890 PF03819 MazG nucleotide pyrophosphohydrolase domain A3K93_01900 PF12627 Probable RNA and SrmB- binding site of polymerase A A3K93_01900 PF12626 Polymerase A arginine-rich C-terminus A3K93_01900 PF01743 Poly A polymerase head domain A3K93_01905 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A3K93_01910 PF02548 Ketopantoate hydroxymethyltransferase A3K93_01915 PF02569 Pantoate-beta-alanine ligase A3K93_01920 PF03668 P-loop ATPase protein family A3K93_01925 PF00381 PTS HPr component phosphorylation site A3K93_01930 PF04751 Protein of unknown function (DUF615) A3K93_01935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_01935 PF00512 His Kinase A (phospho-acceptor) domain A3K93_01935 PF13426 PAS domain A3K93_01935 PF00672 HAMP domain A3K93_01940 PF03710 Glutamate-ammonia ligase adenylyltransferase A3K93_01940 PF08335 GlnD PII-uridylyltransferase A3K93_01945 PF01063 Amino-transferase class IV A3K93_01965 PF13439 Glycosyltransferase Family 4 A3K93_01965 PF00534 Glycosyl transferases group 1 A3K93_01980 PF01219 Prokaryotic diacylglycerol kinase A3K93_01995 PF00152 tRNA synthetases class II (D, K and N) A3K93_01995 PF01336 OB-fold nucleic acid binding domain A3K93_01995 PF02938 GAD domain A3K93_02005 PF00593 TonB dependent receptor A3K93_02005 PF07715 TonB-dependent Receptor Plug Domain A3K93_02025 PF06146 Phosphate-starvation-inducible E A3K93_02035 PF12806 Acetyl-CoA dehydrogenase C-terminal like A3K93_02035 PF02770 Acyl-CoA dehydrogenase, middle domain A3K93_02035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A3K93_02035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A3K93_02040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A3K93_02040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A3K93_02040 PF02770 Acyl-CoA dehydrogenase, middle domain A3K93_02040 PF12806 Acetyl-CoA dehydrogenase C-terminal like A3K93_02050 PF00512 His Kinase A (phospho-acceptor) domain A3K93_02050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_02050 PF00672 HAMP domain A3K93_02055 PF00486 Transcriptional regulatory protein, C terminal A3K93_02055 PF00072 Response regulator receiver domain A3K93_02065 PF00324 Amino acid permease A3K93_02075 PF02696 Uncharacterized ACR, YdiU/UPF0061 family A3K93_02095 PF01923 Cobalamin adenosyltransferase A3K93_02100 PF00593 TonB dependent receptor A3K93_02100 PF07715 TonB-dependent Receptor Plug Domain A3K93_02105 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A3K93_02110 PF00291 Pyridoxal-phosphate dependent enzyme A3K93_02140 PF00290 Tryptophan synthase alpha chain A3K93_02145 PF01039 Carboxyl transferase domain A3K93_02150 PF08245 Mur ligase middle domain A3K93_02150 PF02875 Mur ligase family, glutamate ligase domain A3K93_02160 PF00578 AhpC/TSA family A3K93_02160 PF10417 C-terminal domain of 1-Cys peroxiredoxin A3K93_02165 PF02810 SEC-C motif A3K93_02165 PF07517 SecA DEAD-like domain A3K93_02165 PF07516 SecA Wing and Scaffold domain A3K93_02165 PF01043 SecA preprotein cross-linking domain A3K93_02175 PF01960 ArgJ family A3K93_02180 PF02445 Quinolinate synthetase A protein A3K93_02215 PF00563 EAL domain A3K93_02215 PF00990 Diguanylate cyclase, GGDEF domain A3K93_02215 PF03707 Bacterial signalling protein N terminal repeat A3K93_02245 PF04552 Sigma-54, DNA binding domain A3K93_02245 PF04963 Sigma-54 factor, core binding domain A3K93_02245 PF00309 Sigma-54 factor, Activator interacting domain (AID) A3K93_02250 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A3K93_02255 PF01722 BolA-like protein A3K93_02260 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A3K93_02265 PF01634 ATP phosphoribosyltransferase A3K93_02270 PF00815 Histidinol dehydrogenase A3K93_02275 PF00155 Aminotransferase class I and II A3K93_02280 PF04715 Anthranilate synthase component I, N terminal region A3K93_02280 PF00425 chorismate binding enzyme A3K93_02320 PF00293 NUDIX domain A3K93_02325 PF00132 Bacterial transferase hexapeptide (six repeats) A3K93_02330 PF00814 Glycoprotease family A3K93_02335 PF02673 Bacitracin resistance protein BacA A3K93_02340 PF04445 Putative SAM-dependent methyltransferase A3K93_02350 PF00756 Putative esterase A3K93_02355 PF05987 Bacterial protein of unknown function (DUF898) A3K93_02370 PF00834 Ribulose-phosphate 3 epimerase family A3K93_02375 PF00893 Small Multidrug Resistance protein A3K93_02380 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A3K93_02380 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A3K93_02385 PF08378 Nuclease-related domain A3K93_02390 PF01207 Dihydrouridine synthase (Dus) A3K93_02410 PF00114 Pilin (bacterial filament) A3K93_02410 PF07963 Prokaryotic N-terminal methylation motif A3K93_02420 PF00448 SRP54-type protein, GTPase domain A3K93_02420 PF02978 Signal peptide binding domain A3K93_02420 PF02881 SRP54-type protein, helical bundle domain A3K93_02425 PF06821 Serine hydrolase A3K93_02435 PF03309 Type III pantothenate kinase A3K93_02445 PF01925 Sulfite exporter TauE/SafE A3K93_02455 PF06470 SMC proteins Flexible Hinge Domain A3K93_02455 PF02463 RecF/RecN/SMC N terminal domain A3K93_02465 PF03119 NAD-dependent DNA ligase C4 zinc finger domain A3K93_02465 PF12826 Helix-hairpin-helix motif A3K93_02465 PF03120 NAD-dependent DNA ligase OB-fold domain A3K93_02465 PF00533 BRCA1 C Terminus (BRCT) domain A3K93_02465 PF01653 NAD-dependent DNA ligase adenylation domain A3K93_02470 PF05971 RNA methyltransferase A3K93_02475 PF00210 Ferritin-like domain A3K93_02480 PF13005 zinc-finger binding domain of transposase IS66 A3K93_02480 PF13007 Transposase C of IS166 homeodomain A3K93_02480 PF13817 IS66 C-terminal element A3K93_02480 PF03050 Transposase IS66 family A3K93_02505 PF04079 Segregation and condensation complex subunit ScpB A3K93_02510 PF02616 Segregation and condensation protein ScpA A3K93_02515 PF01300 Telomere recombination A3K93_02520 PF04315 Elongation factor P hydroxylase A3K93_02525 PF02620 Large ribosomal RNA subunit accumulation protein YceD A3K93_02530 PF01783 Ribosomal L32p protein family A3K93_02535 PF00698 Acyl transferase domain A3K93_02545 PF00550 Phosphopantetheine attachment site A3K93_02550 PF04972 BON domain A3K93_02550 PF01476 LysM domain A3K93_02555 PF01037 Lrp/AsnC ligand binding domain A3K93_02560 PF01266 FAD dependent oxidoreductase A3K93_02565 PF00842 Alanine racemase, C-terminal domain A3K93_02565 PF01168 Alanine racemase, N-terminal domain A3K93_02570 PF01042 Endoribonuclease L-PSP A3K93_02575 PF00324 Amino acid permease A3K93_02585 PF02801 Beta-ketoacyl synthase, C-terminal domain A3K93_02585 PF00109 Beta-ketoacyl synthase, N-terminal domain A3K93_02595 PF00164 Ribosomal protein S12/S23 A3K93_02600 PF00177 Ribosomal protein S7p/S5e A3K93_02605 PF00679 Elongation factor G C-terminus A3K93_02605 PF14492 Elongation Factor G, domain II A3K93_02605 PF03764 Elongation factor G, domain IV A3K93_02605 PF00009 Elongation factor Tu GTP binding domain A3K93_02605 PF03144 Elongation factor Tu domain 2 A3K93_02610 PF00009 Elongation factor Tu GTP binding domain A3K93_02610 PF03144 Elongation factor Tu domain 2 A3K93_02610 PF03143 Elongation factor Tu C-terminal domain A3K93_02620 PF00583 Acetyltransferase (GNAT) family A3K93_02625 PF04377 Arginine-tRNA-protein transferase, C terminus A3K93_02625 PF04376 Arginine-tRNA-protein transferase, N terminus A3K93_02630 PF03588 Leucyl/phenylalanyl-tRNA protein transferase A3K93_02635 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_02640 PF09397 Ftsk gamma domain A3K93_02640 PF13491 4TM region of DNA translocase FtsK/SpoIIIE A3K93_02640 PF17854 FtsK alpha domain A3K93_02640 PF01580 FtsK/SpoIIIE family A3K93_02650 PF03776 Septum formation topological specificity factor MinE A3K93_02655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A3K93_02660 PF03775 Septum formation inhibitor MinC, C-terminal domain A3K93_02670 PF01553 Acyltransferase A3K93_02675 PF13488 Glycine zipper A3K93_02675 PF00691 OmpA family A3K93_02680 PF13361 UvrD-like helicase C-terminal domain A3K93_02680 PF00580 UvrD/REP helicase N-terminal domain A3K93_02685 PF00692 dUTPase A3K93_02690 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A3K93_02690 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A3K93_02690 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A3K93_02690 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A3K93_02695 PF00696 Amino acid kinase family A3K93_02700 PF13230 Glutamine amidotransferases class-II A3K93_02705 PF01814 Hemerythrin HHE cation binding domain A3K93_02715 PF03658 RnfH family Ubiquitin A3K93_02720 PF04355 SmpA / OmlA family A3K93_02725 PF01475 Ferric uptake regulator family A3K93_02730 PF00437 Type II/IV secretion system protein A3K93_02735 PF00437 Type II/IV secretion system protein A3K93_02740 PF01168 Alanine racemase, N-terminal domain A3K93_02750 PF00149 Calcineurin-like phosphoesterase A3K93_02750 PF12320 Type 5 capsule protein repressor C-terminal domain A3K93_02760 PF00490 Delta-aminolevulinic acid dehydratase A3K93_02765 PF03061 Thioesterase superfamily A3K93_02770 PF00529 HlyD membrane-fusion protein of T1SS A3K93_02770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A3K93_02775 PF07690 Major Facilitator Superfamily A3K93_02780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A3K93_02780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A3K93_02800 PF01527 Transposase A3K93_02805 PF13276 HTH-like domain A3K93_02805 PF00665 Integrase core domain A3K93_02805 PF13333 Integrase core domain A3K93_02810 PF02677 Epoxyqueuosine reductase QueH A3K93_02815 PF07690 Major Facilitator Superfamily A3K93_02815 PF00083 Sugar (and other) transporter A3K93_02825 PF01717 Cobalamin-independent synthase, Catalytic domain A3K93_02825 PF08267 Cobalamin-independent synthase, N-terminal domain A3K93_02835 PF02661 Fic/DOC family A3K93_02835 PF13784 Fic/DOC family N-terminal A3K93_02860 PF13683 Integrase core domain A3K93_02860 PF13276 HTH-like domain A3K93_02865 PF01527 Transposase A3K93_02870 PF01047 MarR family A3K93_02875 PF05977 Transmembrane secretion effector A3K93_02885 PF07690 Major Facilitator Superfamily A3K93_02895 PF01557 Fumarylacetoacetate (FAA) hydrolase family A3K93_02900 PF01557 Fumarylacetoacetate (FAA) hydrolase family A3K93_02905 PF00171 Aldehyde dehydrogenase family A3K93_02910 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase A3K93_02915 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase A3K93_02920 PF01557 Fumarylacetoacetate (FAA) hydrolase family A3K93_02925 PF03328 HpcH/HpaI aldolase/citrate lyase family A3K93_02930 PF00171 Aldehyde dehydrogenase family A3K93_02935 PF07690 Major Facilitator Superfamily A3K93_02940 PF13333 Integrase core domain A3K93_02940 PF00665 Integrase core domain A3K93_02940 PF13276 HTH-like domain A3K93_02950 PF08028 Acyl-CoA dehydrogenase, C-terminal domain A3K93_02955 PF01613 Flavin reductase like domain A3K93_02980 PF07690 Major Facilitator Superfamily A3K93_02985 PF03573 outer membrane porin, OprD family A3K93_02990 PF01047 MarR family A3K93_03000 PF05992 SbmA/BacA-like family A3K93_03025 PF00665 Integrase core domain A3K93_03025 PF02796 Helix-turn-helix domain of resolvase A3K93_03030 PF01695 IstB-like ATP binding protein A3K93_03035 PF13683 Integrase core domain A3K93_03035 PF13276 HTH-like domain A3K93_03045 PF00872 Transposase, Mutator family A3K93_03050 PF02934 GatB/GatE catalytic domain A3K93_03050 PF02637 GatB domain A3K93_03055 PF01425 Amidase A3K93_03060 PF02686 Glu-tRNAGln amidotransferase C subunit A3K93_03070 PF04085 rod shape-determining protein MreC A3K93_03075 PF04093 rod shape-determining protein MreD A3K93_03080 PF02545 Maf-like protein A3K93_03085 PF10150 Ribonuclease E/G family A3K93_03085 PF00575 S1 RNA binding domain A3K93_03090 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain A3K93_03090 PF06974 Protein of unknown function (DUF1298) A3K93_03095 PF01507 Phosphoadenosine phosphosulfate reductase family A3K93_03115 PF13737 Transposase DDE domain A3K93_03130 PF00324 Amino acid permease A3K93_03135 PF04303 PrpF protein A3K93_03145 PF00348 Polyprenyl synthetase A3K93_03150 PF00474 Sodium:solute symporter family A3K93_03155 PF01145 SPFH domain / Band 7 family A3K93_03190 PF00072 Response regulator receiver domain A3K93_03190 PF00990 Diguanylate cyclase, GGDEF domain A3K93_03215 PF00872 Transposase, Mutator family A3K93_03225 PF13340 Putative transposase of IS4/5 family (DUF4096) A3K93_03235 PF08264 Anticodon-binding domain of tRNA A3K93_03235 PF00133 tRNA synthetases class I (I, L, M and V) A3K93_03235 PF10458 Valyl tRNA synthetase tRNA binding arm A3K93_03250 PF07694 5TMR of 5TMR-LYT A3K93_03250 PF00990 Diguanylate cyclase, GGDEF domain A3K93_03255 PF04960 Glutaminase A3K93_03265 PF02733 Dak1 domain A3K93_03270 PF04480 Protein of unknown function (DUF559) A3K93_03275 PF00665 Integrase core domain A3K93_03275 PF13333 Integrase core domain A3K93_03275 PF13276 HTH-like domain A3K93_03280 PF01527 Transposase A3K93_03290 PF10137 Predicted nucleotide-binding protein containing TIR-like domain A3K93_03295 PF02607 B12 binding domain A3K93_03295 PF00809 Pterin binding enzyme A3K93_03295 PF02310 B12 binding domain A3K93_03295 PF02965 Vitamin B12 dependent methionine synthase, activation domain A3K93_03295 PF02574 Homocysteine S-methyltransferase A3K93_03300 PF01384 Phosphate transporter family A3K93_03310 PF01497 Periplasmic binding protein A3K93_03320 PF01106 NifU-like domain A3K93_03320 PF01521 Iron-sulphur cluster biosynthesis A3K93_03325 PF07715 TonB-dependent Receptor Plug Domain A3K93_03325 PF00593 TonB dependent receptor A3K93_03335 PF00561 alpha/beta hydrolase fold A3K93_03340 PF13359 DDE superfamily endonuclease A3K93_03340 PF13613 Helix-turn-helix of DDE superfamily endonuclease A3K93_03345 PF13613 Helix-turn-helix of DDE superfamily endonuclease A3K93_03345 PF13359 DDE superfamily endonuclease A3K93_03350 PF00484 Carbonic anhydrase A3K93_03355 PF13472 GDSL-like Lipase/Acylhydrolase family A3K93_03360 PF00005 ABC transporter A3K93_03370 PF01694 Rhomboid family A3K93_03375 PF00912 Transglycosylase A3K93_03380 PF17941 Polyphosphate kinase C-terminal domain 1 A3K93_03380 PF02503 Polyphosphate kinase middle domain A3K93_03380 PF13090 Polyphosphate kinase C-terminal domain 2 A3K93_03380 PF13089 Polyphosphate kinase N-terminal domain A3K93_03390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_03390 PF03466 LysR substrate binding domain A3K93_03395 PF00561 alpha/beta hydrolase fold A3K93_03400 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_03400 PF18113 Rubredoxin binding C-terminal domain A3K93_03405 PF00301 Rubredoxin A3K93_03410 PF00156 Phosphoribosyl transferase domain A3K93_03420 PF00152 tRNA synthetases class II (D, K and N) A3K93_03420 PF01336 OB-fold nucleic acid binding domain A3K93_03430 PF00579 tRNA synthetases class I (W and Y) A3K93_03435 PF05661 Protein of unknown function (DUF808) A3K93_03440 PF04228 Putative neutral zinc metallopeptidase A3K93_03450 PF00999 Sodium/hydrogen exchanger family A3K93_03465 PF02540 NAD synthase A3K93_03465 PF00795 Carbon-nitrogen hydrolase A3K93_03480 PF00285 Citrate synthase, C-terminal domain A3K93_03485 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A3K93_03490 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A3K93_03495 PF00890 FAD binding domain A3K93_03495 PF02910 Fumarate reductase flavoprotein C-term A3K93_03500 PF13085 2Fe-2S iron-sulfur cluster binding domain A3K93_03505 PF16870 2-oxoglutarate dehydrogenase C-terminal A3K93_03505 PF02779 Transketolase, pyrimidine binding domain A3K93_03505 PF00676 Dehydrogenase E1 component A3K93_03505 PF16078 2-oxoglutarate dehydrogenase N-terminus A3K93_03510 PF00364 Biotin-requiring enzyme A3K93_03510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A3K93_03510 PF02817 e3 binding domain A3K93_03515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A3K93_03515 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_03520 PF00549 CoA-ligase A3K93_03520 PF08442 ATP-grasp domain A3K93_03525 PF02629 CoA binding domain A3K93_03525 PF00549 CoA-ligase A3K93_03550 PF01507 Phosphoadenosine phosphosulfate reductase family A3K93_03555 PF00009 Elongation factor Tu GTP binding domain A3K93_03570 PF16197 Ketoacyl-synthetase C-terminal extension A3K93_03570 PF02801 Beta-ketoacyl synthase, C-terminal domain A3K93_03570 PF08659 KR domain A3K93_03570 PF00550 Phosphopantetheine attachment site A3K93_03570 PF14765 Polyketide synthase dehydratase A3K93_03570 PF00698 Acyl transferase domain A3K93_03570 PF00109 Beta-ketoacyl synthase, N-terminal domain A3K93_03570 PF08240 Alcohol dehydrogenase GroES-like domain A3K93_03590 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A3K93_03590 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A3K93_03605 PF00083 Sugar (and other) transporter A3K93_03610 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain A3K93_03610 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain A3K93_03615 PF00781 Diacylglycerol kinase catalytic domain A3K93_03625 PF00166 Chaperonin 10 Kd subunit A3K93_03630 PF00118 TCP-1/cpn60 chaperonin family A3K93_03635 PF13340 Putative transposase of IS4/5 family (DUF4096) A3K93_03675 PF00905 Penicillin binding protein transpeptidase domain A3K93_03675 PF03717 Penicillin-binding Protein dimerisation domain A3K93_03690 PF05191 Adenylate kinase, active site lid A3K93_03700 PF00633 Helix-hairpin-helix motif A3K93_03700 PF10576 Iron-sulfur binding domain of endonuclease III A3K93_03700 PF00730 HhH-GPD superfamily base excision DNA repair protein A3K93_03705 PF04060 Putative Fe-S cluster A3K93_03710 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A3K93_03710 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A3K93_03720 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase A3K93_03725 PF02590 Predicted SPOUT methyltransferase A3K93_03730 PF04389 Peptidase family M28 A3K93_03735 PF05362 Lon protease (S16) C-terminal proteolytic domain A3K93_03735 PF02190 ATP-dependent protease La (LON) substrate-binding domain A3K93_03735 PF00004 ATPase family associated with various cellular activities (AAA) A3K93_03740 PF01812 5-formyltetrahydrofolate cyclo-ligase family A3K93_03785 PF01695 IstB-like ATP binding protein A3K93_03820 PF13419 Haloacid dehalogenase-like hydrolase A3K93_03845 PF03695 Uncharacterised protein family (UPF0149) A3K93_03850 PF05195 Aminopeptidase P, N-terminal domain A3K93_03850 PF00557 Metallopeptidase family M24 A3K93_03860 PF13333 Integrase core domain A3K93_03860 PF00665 Integrase core domain A3K93_03860 PF13276 HTH-like domain A3K93_03870 PF04070 Domain of unknown function (DUF378) A3K93_03875 PF13340 Putative transposase of IS4/5 family (DUF4096) A3K93_03880 PF01494 FAD binding domain A3K93_03885 PF01494 FAD binding domain A3K93_03895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A3K93_03900 PF02021 Uncharacterised protein family UPF0102 A3K93_03905 PF04972 BON domain A3K93_03915 PF00293 NUDIX domain A3K93_03915 PF09297 NADH pyrophosphatase zinc ribbon domain A3K93_03925 PF00929 Exonuclease A3K93_03930 PF01464 Transglycosylase SLT domain A3K93_03930 PF01476 LysM domain A3K93_03935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A3K93_03940 PF00528 Binding-protein-dependent transport system inner membrane component A3K93_03945 PF00528 Binding-protein-dependent transport system inner membrane component A3K93_03945 PF12911 N-terminal TM domain of oligopeptide transport permease C A3K93_03950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A3K93_03950 PF00005 ABC transporter A3K93_03955 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_03955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A3K93_03985 PF00324 Amino acid permease A3K93_03995 PF00324 Amino acid permease A3K93_04000 PF00929 Exonuclease A3K93_04005 PF01979 Amidohydrolase family A3K93_04010 PF00990 Diguanylate cyclase, GGDEF domain A3K93_04010 PF01590 GAF domain A3K93_04010 PF00563 EAL domain A3K93_04010 PF00360 Phytochrome region A3K93_04015 PF00764 Arginosuccinate synthase A3K93_04025 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_04025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A3K93_04035 PF17954 Quercetinase C-terminal cupin domain A3K93_04035 PF02678 Pirin A3K93_04045 PF01208 Uroporphyrinogen decarboxylase (URO-D) A3K93_04050 PF05675 Protein of unknown function (DUF817) A3K93_04065 PF00990 Diguanylate cyclase, GGDEF domain A3K93_04085 PF01227 GTP cyclohydrolase I A3K93_04095 PF00218 Indole-3-glycerol phosphate synthase A3K93_04100 PF00591 Glycosyl transferase family, a/b domain A3K93_04100 PF02885 Glycosyl transferase family, helical bundle domain A3K93_04105 PF00117 Glutamine amidotransferase class-I A3K93_04120 PF04345 Chorismate lyase A3K93_04125 PF01040 UbiA prenyltransferase family A3K93_04170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A3K93_04170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A3K93_04175 PF01784 NIF3 (NGG1p interacting factor 3) A3K93_04180 PF13180 PDZ domain A3K93_04185 PF09317 Domain of unknown function (DUF1974) A3K93_04185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A3K93_04185 PF02770 Acyl-CoA dehydrogenase, middle domain A3K93_04185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A3K93_04190 PF04055 Radical SAM superfamily A3K93_04195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A3K93_04195 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_04220 PF12344 Ultra-violet resistance protein B A3K93_04220 PF00271 Helicase conserved C-terminal domain A3K93_04220 PF04851 Type III restriction enzyme, res subunit A3K93_04220 PF02151 UvrB/uvrC motif A3K93_04220 PF17757 UvrB interaction domain A3K93_04230 PF00892 EamA-like transporter family A3K93_04235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A3K93_04235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A3K93_04250 PF05368 NmrA-like family A3K93_04255 PF01638 HxlR-like helix-turn-helix A3K93_04265 PF07690 Major Facilitator Superfamily A3K93_04270 PF01926 50S ribosome-binding GTPase A3K93_04270 PF01018 GTP1/OBG A3K93_04275 PF00696 Amino acid kinase family A3K93_04275 PF01472 PUA domain A3K93_04280 PF01569 PAP2 superfamily A3K93_04290 PF00202 Aminotransferase class-III A3K93_04295 PF00282 Pyridoxal-dependent decarboxylase conserved domain A3K93_04305 PF00528 Binding-protein-dependent transport system inner membrane component A3K93_04310 PF00528 Binding-protein-dependent transport system inner membrane component A3K93_04315 PF00005 ABC transporter A3K93_04325 PF08496 Peptidase family S49 N-terminal A3K93_04325 PF01343 Peptidase family S49 A3K93_04335 PF00665 Integrase core domain A3K93_04335 PF13936 Helix-turn-helix domain A3K93_04350 PF00206 Lyase A3K93_04350 PF08328 Adenylosuccinate lyase C-terminal A3K93_04355 PF04356 Protein of unknown function (DUF489) A3K93_04365 PF00293 NUDIX domain A3K93_04375 PF00132 Bacterial transferase hexapeptide (six repeats) A3K93_04380 PF00768 D-alanyl-D-alanine carboxypeptidase A3K93_04380 PF07943 Penicillin-binding protein 5, C-terminal domain A3K93_04395 PF01975 Survival protein SurE A3K93_04400 PF01551 Peptidase family M23 A3K93_04400 PF01476 LysM domain A3K93_04405 PF03466 LysR substrate binding domain A3K93_04405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_04410 PF00202 Aminotransferase class-III A3K93_04415 PF00462 Glutaredoxin A3K93_04420 PF13654 AAA domain A3K93_04420 PF05362 Lon protease (S16) C-terminal proteolytic domain A3K93_04425 PF07690 Major Facilitator Superfamily A3K93_04430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A3K93_04435 PF13593 SBF-like CPA transporter family (DUF4137) A3K93_04440 PF01197 Ribosomal protein L31 A3K93_04455 PF04055 Radical SAM superfamily A3K93_04460 PF09285 Elongation factor P, C-terminal A3K93_04460 PF08207 Elongation factor P (EF-P) KOW-like domain A3K93_04460 PF01132 Elongation factor P (EF-P) OB domain A3K93_04465 PF02554 Carbon starvation protein CstA A3K93_04465 PF13722 5TM C-terminal transporter carbon starvation CstA A3K93_04470 PF04328 Selenoprotein, putative A3K93_04480 PF07726 ATPase family associated with various cellular activities (AAA) A3K93_04480 PF17863 AAA lid domain A3K93_04490 PF11992 Domain of unknown function (DUF3488) A3K93_04490 PF01841 Transglutaminase-like superfamily A3K93_04490 PF13559 Domain of unknown function (DUF4129) A3K93_04500 PF03971 Monomeric isocitrate dehydrogenase A3K93_04510 PF02566 OsmC-like protein A3K93_04515 PF13545 Crp-like helix-turn-helix domain A3K93_04515 PF00027 Cyclic nucleotide-binding domain A3K93_04520 PF00248 Aldo/keto reductase family A3K93_04525 PF10431 C-terminal, D2-small domain, of ClpB protein A3K93_04525 PF00004 ATPase family associated with various cellular activities (AAA) A3K93_04525 PF02861 Clp amino terminal domain, pathogenicity island component A3K93_04525 PF17871 AAA lid domain A3K93_04525 PF07724 AAA domain (Cdc48 subfamily) A3K93_04530 PF01170 Putative RNA methylase family UPF0020 A3K93_04530 PF02926 THUMP domain A3K93_04530 PF10672 S-adenosylmethionine-dependent methyltransferase A3K93_04540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A3K93_04540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A3K93_04545 PF01979 Amidohydrolase family A3K93_04560 PF00171 Aldehyde dehydrogenase family A3K93_04565 PF02390 Putative methyltransferase A3K93_04570 PF00916 Sulfate permease family A3K93_04570 PF01740 STAS domain A3K93_04575 PF00043 Glutathione S-transferase, C-terminal domain A3K93_04575 PF02798 Glutathione S-transferase, N-terminal domain A3K93_04580 PF04241 Protein of unknown function (DUF423) A3K93_04585 PF04545 Sigma-70, region 4 A3K93_04585 PF04542 Sigma-70 region 2 A3K93_04585 PF00140 Sigma-70 factor, region 1.2 A3K93_04595 PF00313 'Cold-shock' DNA-binding domain A3K93_04600 PF00271 Helicase conserved C-terminal domain A3K93_04600 PF00270 DEAD/DEAH box helicase A3K93_04610 PF00881 Nitroreductase family A3K93_04615 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A3K93_04615 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A3K93_04635 PF01180 Dihydroorotate dehydrogenase A3K93_04645 PF00156 Phosphoribosyl transferase domain A3K93_04660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A3K93_04660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A3K93_04665 PF01435 Peptidase family M48 A3K93_04670 PF09424 Yqey-like protein A3K93_04675 PF01165 Ribosomal protein S21 A3K93_04680 PF00814 Glycoprotease family A3K93_04695 PF13333 Integrase core domain A3K93_04695 PF00665 Integrase core domain A3K93_04695 PF13276 HTH-like domain A3K93_04705 PF01527 Transposase A3K93_04765 PF16123 Hydroxyacylglutathione hydrolase C-terminus A3K93_04765 PF00753 Metallo-beta-lactamase superfamily A3K93_04775 PF02567 Phenazine biosynthesis-like protein A3K93_04780 PF00675 Insulinase (Peptidase family M16) A3K93_04780 PF05193 Peptidase M16 inactive domain A3K93_04815 PF02581 Thiamine monophosphate synthase A3K93_04820 PF00202 Aminotransferase class-III A3K93_04825 PF13340 Putative transposase of IS4/5 family (DUF4096) A3K93_04830 PF03928 Haem-degrading A3K93_04850 PF00849 RNA pseudouridylate synthase A3K93_04855 PF00271 Helicase conserved C-terminal domain A3K93_04855 PF12137 RNA polymerase recycling family C-terminal A3K93_04855 PF00176 SNF2 family N-terminal domain A3K93_04855 PF18339 RapA N-terminal Tudor like domain 1 A3K93_04855 PF18337 RapA N-terminal Tudor like domain A3K93_04865 PF00440 Bacterial regulatory proteins, tetR family A3K93_04870 PF00970 Oxidoreductase FAD-binding domain A3K93_04870 PF00111 2Fe-2S iron-sulfur cluster binding domain A3K93_04870 PF00175 Oxidoreductase NAD-binding domain A3K93_04875 PF00487 Fatty acid desaturase A3K93_04885 PF07759 Protein of unknown function (DUF1615) A3K93_04890 PF01207 Dihydrouridine synthase (Dus) A3K93_04900 PF03060 Nitronate monooxygenase A3K93_04945 PF00438 S-adenosylmethionine synthetase, N-terminal domain A3K93_04945 PF02773 S-adenosylmethionine synthetase, C-terminal domain A3K93_04945 PF02772 S-adenosylmethionine synthetase, central domain A3K93_04950 PF07963 Prokaryotic N-terminal methylation motif A3K93_04950 PF00114 Pilin (bacterial filament) A3K93_04955 PF02780 Transketolase, C-terminal domain A3K93_04955 PF00456 Transketolase, thiamine diphosphate binding domain A3K93_04955 PF02779 Transketolase, pyrimidine binding domain A3K93_04975 PF01609 Transposase DDE domain A3K93_04975 PF13006 Insertion element 4 transposase N-terminal A3K93_04980 PF01810 LysE type translocator A3K93_04985 PF00117 Glutamine amidotransferase class-I A3K93_04985 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A3K93_04995 PF01406 tRNA synthetases class I (C) catalytic domain A3K93_04995 PF09190 DALR domain A3K93_05000 PF00571 CBS domain A3K93_05000 PF01380 SIS domain A3K93_05015 PF03968 OstA-like protein A3K93_05020 PF12399 Branched-chain amino acid ATP-binding cassette transporter A3K93_05020 PF00005 ABC transporter A3K93_05025 PF02321 Outer membrane efflux protein A3K93_05030 PF00005 ABC transporter A3K93_05030 PF03412 Peptidase C39 family A3K93_05030 PF00664 ABC transporter transmembrane region A3K93_05035 PF13533 Biotin-lipoyl like A3K93_05040 PF01205 Uncharacterized protein family UPF0029 A3K93_05050 PF00582 Universal stress protein family A3K93_05055 PF01596 O-methyltransferase A3K93_05065 PF11953 Domain of unknown function (DUF3470) A3K93_05065 PF00037 4Fe-4S binding domain A3K93_05070 PF05188 MutS domain II A3K93_05070 PF05192 MutS domain III A3K93_05070 PF05190 MutS family domain IV A3K93_05070 PF00488 MutS domain V A3K93_05070 PF01624 MutS domain I A3K93_05075 PF01590 GAF domain A3K93_05075 PF00360 Phytochrome region A3K93_05075 PF00563 EAL domain A3K93_05075 PF00990 Diguanylate cyclase, GGDEF domain A3K93_05095 PF00132 Bacterial transferase hexapeptide (six repeats) A3K93_05100 PF00588 SpoU rRNA Methylase family A3K93_05105 PF07733 Bacterial DNA polymerase III alpha NTPase domain A3K93_05105 PF02811 PHP domain A3K93_05105 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A3K93_05105 PF14579 Helix-hairpin-helix motif A3K93_05105 PF01336 OB-fold nucleic acid binding domain A3K93_05110 PF00528 Binding-protein-dependent transport system inner membrane component A3K93_05115 PF09383 NIL domain A3K93_05115 PF00005 ABC transporter A3K93_05120 PF03180 NLPA lipoprotein A3K93_05140 PF13613 Helix-turn-helix of DDE superfamily endonuclease A3K93_05140 PF13359 DDE superfamily endonuclease A3K93_05145 PF13613 Helix-turn-helix of DDE superfamily endonuclease A3K93_05145 PF13359 DDE superfamily endonuclease A3K93_05165 PF00872 Transposase, Mutator family A3K93_05170 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A3K93_05170 PF02843 Phosphoribosylglycinamide synthetase, C domain A3K93_05170 PF02844 Phosphoribosylglycinamide synthetase, N domain A3K93_05175 PF02142 MGS-like domain A3K93_05175 PF01808 AICARFT/IMPCHase bienzyme A3K93_05180 PF02954 Bacterial regulatory protein, Fis family A3K93_05205 PF01758 Sodium Bile acid symporter family A3K93_05215 PF13932 GidA associated domain A3K93_05215 PF01134 Glucose inhibited division protein A A3K93_05220 PF07690 Major Facilitator Superfamily A3K93_05230 PF00072 Response regulator receiver domain A3K93_05230 PF00158 Sigma-54 interaction domain A3K93_05230 PF02954 Bacterial regulatory protein, Fis family A3K93_05235 PF00512 His Kinase A (phospho-acceptor) domain A3K93_05235 PF00989 PAS fold A3K93_05235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_05240 PF04055 Radical SAM superfamily A3K93_05240 PF00919 Uncharacterized protein family UPF0004 A3K93_05240 PF18693 TRAM domain A3K93_05245 PF00696 Amino acid kinase family A3K93_05250 PF01765 Ribosome recycling factor A3K93_05255 PF01255 Putative undecaprenyl diphosphate synthase A3K93_05265 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain A3K93_05265 PF13288 DXP reductoisomerase C-terminal domain A3K93_05265 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase A3K93_05270 PF02163 Peptidase family M50 A3K93_05270 PF17820 PDZ domain A3K93_05270 PF13180 PDZ domain A3K93_05275 PF01103 Surface antigen A3K93_05275 PF07244 Surface antigen variable number repeat A3K93_05285 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD A3K93_05285 PF00132 Bacterial transferase hexapeptide (six repeats) A3K93_05290 PF07977 FabA-like domain A3K93_05295 PF00132 Bacterial transferase hexapeptide (six repeats) A3K93_05295 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 A3K93_05310 PF02631 RecX family A3K93_05315 PF00154 recA bacterial DNA recombination protein A3K93_05320 PF01479 S4 domain A3K93_05325 PF13419 Haloacid dehalogenase-like hydrolase A3K93_05330 PF00459 Inositol monophosphatase family A3K93_05340 PF01649 Ribosomal protein S20 A3K93_05345 PF13460 NAD(P)H-binding A3K93_05350 PF03737 Aldolase/RraA A3K93_05360 PF00486 Transcriptional regulatory protein, C terminal A3K93_05360 PF00072 Response regulator receiver domain A3K93_05370 PF07282 Putative transposase DNA-binding domain A3K93_05370 PF12323 Helix-turn-helix domain A3K93_05370 PF01385 Probable transposase A3K93_05385 PF08007 Cupin superfamily protein A3K93_05400 PF02545 Maf-like protein A3K93_05410 PF00162 Phosphoglycerate kinase A3K93_05420 PF01116 Fructose-bisphosphate aldolase class-II A3K93_05435 PF00881 Nitroreductase family A3K93_05440 PF03328 HpcH/HpaI aldolase/citrate lyase family A3K93_05445 PF02110 Hydroxyethylthiazole kinase family A3K93_05455 PF00296 Luciferase-like monooxygenase A3K93_05460 PF13419 Haloacid dehalogenase-like hydrolase A3K93_05470 PF00149 Calcineurin-like phosphoesterase A3K93_05475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A3K93_05480 PF00749 tRNA synthetases class I (E and Q), catalytic domain A3K93_05480 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain A3K93_05500 PF05958 tRNA (Uracil-5-)-methyltransferase A3K93_05505 PF01037 Lrp/AsnC ligand binding domain A3K93_05515 PF03461 TRCF domain A3K93_05515 PF02559 CarD-like/TRCF domain A3K93_05515 PF17757 UvrB interaction domain A3K93_05515 PF00271 Helicase conserved C-terminal domain A3K93_05515 PF00270 DEAD/DEAH box helicase A3K93_05525 PF00211 Adenylate and Guanylate cyclase catalytic domain A3K93_05540 PF00111 2Fe-2S iron-sulfur cluster binding domain A3K93_05545 PF00012 Hsp70 protein A3K93_05550 PF07743 HSCB C-terminal oligomerisation domain A3K93_05550 PF00226 DnaJ domain A3K93_05555 PF01521 Iron-sulphur cluster biosynthesis A3K93_05560 PF01592 NifU-like N terminal domain A3K93_05565 PF00266 Aminotransferase class-V A3K93_05570 PF02082 Transcriptional regulator A3K93_05585 PF00216 Bacterial DNA-binding protein A3K93_05610 PF07290 Protein of unknown function (DUF1449) A3K93_05620 PF00294 pfkB family carbohydrate kinase A3K93_05630 PF05193 Peptidase M16 inactive domain A3K93_05630 PF00675 Insulinase (Peptidase family M16) A3K93_05630 PF08367 Peptidase M16C associated A3K93_05635 PF02253 Phospholipase A1 A3K93_05640 PF02386 Cation transport protein A3K93_05645 PF02254 TrkA-N domain A3K93_05645 PF02080 TrkA-C domain A3K93_05650 PF00291 Pyridoxal-phosphate dependent enzyme A3K93_05650 PF00585 C-terminal regulatory domain of Threonine dehydratase A3K93_05655 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) A3K93_05665 PF09084 NMT1/THI5 like A3K93_05675 PF01118 Semialdehyde dehydrogenase, NAD binding domain A3K93_05675 PF02774 Semialdehyde dehydrogenase, dimerisation domain A3K93_05685 PF02617 ATP-dependent Clp protease adaptor protein ClpS A3K93_05690 PF10431 C-terminal, D2-small domain, of ClpB protein A3K93_05690 PF02861 Clp amino terminal domain, pathogenicity island component A3K93_05690 PF17871 AAA lid domain A3K93_05690 PF07724 AAA domain (Cdc48 subfamily) A3K93_05690 PF00004 ATPase family associated with various cellular activities (AAA) A3K93_05695 PF02694 Uncharacterised BCR, YnfA/UPF0060 family A3K93_05705 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A3K93_05705 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A3K93_05710 PF00440 Bacterial regulatory proteins, tetR family A3K93_05710 PF16859 Tetracyclin repressor-like, C-terminal domain A3K93_05720 PF00285 Citrate synthase, C-terminal domain A3K93_05740 PF13340 Putative transposase of IS4/5 family (DUF4096) A3K93_05750 PF01425 Amidase A3K93_05755 PF00990 Diguanylate cyclase, GGDEF domain A3K93_05755 PF17158 Membrane-associated sensor, integral membrane domain A3K93_05765 PF02785 Biotin carboxylase C-terminal domain A3K93_05765 PF00289 Biotin carboxylase, N-terminal domain A3K93_05765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A3K93_05770 PF00364 Biotin-requiring enzyme A3K93_05775 PF01220 Dehydroquinase class II A3K93_05795 PF00782 Dual specificity phosphatase, catalytic domain A3K93_05800 PF12146 Serine aminopeptidase, S33 A3K93_05800 PF12147 Putative methyltransferase A3K93_05805 PF01066 CDP-alcohol phosphatidyltransferase A3K93_05810 PF04073 Aminoacyl-tRNA editing domain A3K93_05840 PF02635 DsrE/DsrF-like family A3K93_05845 PF16363 GDP-mannose 4,6 dehydratase A3K93_05850 PF00206 Lyase A3K93_05850 PF10415 Fumarase C C-terminus A3K93_05855 PF01757 Acyltransferase family A3K93_05880 PF12697 Alpha/beta hydrolase family A3K93_05885 PF01527 Transposase A3K93_05890 PF13333 Integrase core domain A3K93_05890 PF13276 HTH-like domain A3K93_05890 PF00665 Integrase core domain A3K93_05895 PF00665 Integrase core domain A3K93_05895 PF13333 Integrase core domain A3K93_05895 PF13276 HTH-like domain A3K93_05910 PF02358 Trehalose-phosphatase A3K93_05915 PF00982 Glycosyltransferase family 20 A3K93_05920 PF07690 Major Facilitator Superfamily A3K93_05930 PF05401 Nodulation protein S (NodS) A3K93_05945 PF04239 Protein of unknown function (DUF421) A3K93_05955 PF17151 Periplasmic sensor domain A3K93_05955 PF00990 Diguanylate cyclase, GGDEF domain A3K93_05965 PF01545 Cation efflux family A3K93_05970 PF00487 Fatty acid desaturase A3K93_05975 PF00175 Oxidoreductase NAD-binding domain A3K93_05975 PF00042 Globin A3K93_05975 PF00970 Oxidoreductase FAD-binding domain A3K93_05980 PF00501 AMP-binding enzyme A3K93_05980 PF13193 AMP-binding enzyme C-terminal domain A3K93_05995 PF00449 Urease alpha-subunit, N-terminal domain A3K93_05995 PF01979 Amidohydrolase family A3K93_06000 PF00699 Urease beta subunit A3K93_06005 PF00547 Urease, gamma subunit A3K93_06015 PF01774 UreD urease accessory protein A3K93_06020 PF02492 CobW/HypB/UreG, nucleotide-binding domain A3K93_06025 PF01730 UreF A3K93_06030 PF02814 UreE urease accessory protein, N-terminal domain A3K93_06030 PF05194 UreE urease accessory protein, C-terminal domain A3K93_06035 PF10005 zinc-ribbon domain A3K93_06035 PF15887 Putative zinc-binding metallo-peptidase A3K93_06040 PF00440 Bacterial regulatory proteins, tetR family A3K93_06040 PF08360 QacR-like protein, C-terminal region A3K93_06050 PF09278 MerR, DNA binding A3K93_06050 PF00376 MerR family regulatory protein A3K93_06055 PF00403 Heavy-metal-associated domain A3K93_06060 PF00291 Pyridoxal-phosphate dependent enzyme A3K93_06070 PF00916 Sulfate permease family A3K93_06070 PF01740 STAS domain A3K93_06075 PF00375 Sodium:dicarboxylate symporter family A3K93_06085 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) A3K93_06090 PF00664 ABC transporter transmembrane region A3K93_06090 PF00005 ABC transporter A3K93_06100 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term A3K93_06100 PF12833 Helix-turn-helix domain A3K93_06105 PF01597 Glycine cleavage H-protein A3K93_06110 PF07690 Major Facilitator Superfamily A3K93_06115 PF00437 Type II/IV secretion system protein A3K93_06120 PF00793 DAHP synthetase I family A3K93_06125 PF08240 Alcohol dehydrogenase GroES-like domain A3K93_06125 PF00107 Zinc-binding dehydrogenase A3K93_06130 PF13091 PLD-like domain A3K93_06165 PF00106 short chain dehydrogenase A3K93_06180 PF02770 Acyl-CoA dehydrogenase, middle domain A3K93_06180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A3K93_06180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A3K93_06190 PF00565 Staphylococcal nuclease homologue A3K93_06200 PF07690 Major Facilitator Superfamily A3K93_06205 PF00487 Fatty acid desaturase A3K93_06210 PF12833 Helix-turn-helix domain A3K93_06210 PF12852 Cupin A3K93_06215 PF02684 Lipid-A-disaccharide synthetase A3K93_06220 PF01925 Sulfite exporter TauE/SafE A3K93_06225 PF00793 DAHP synthetase I family A3K93_06235 PF02542 YgbB family A3K93_06250 PF01264 Chorismate synthase A3K93_06255 PF05175 Methyltransferase small domain A3K93_06270 PF03109 ABC1 family A3K93_06275 PF02770 Acyl-CoA dehydrogenase, middle domain A3K93_06275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A3K93_06275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A3K93_06280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A3K93_06280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A3K93_06280 PF02770 Acyl-CoA dehydrogenase, middle domain A3K93_06330 PF02881 SRP54-type protein, helical bundle domain A3K93_06330 PF00448 SRP54-type protein, GTPase domain A3K93_06335 PF00675 Insulinase (Peptidase family M16) A3K93_06335 PF05193 Peptidase M16 inactive domain A3K93_06370 PF00291 Pyridoxal-phosphate dependent enzyme A3K93_06380 PF01434 Peptidase family M41 A3K93_06380 PF17862 AAA+ lid domain A3K93_06380 PF00004 ATPase family associated with various cellular activities (AAA) A3K93_06390 PF05166 YcgL domain A3K93_06395 PF00570 HRDC domain A3K93_06395 PF01612 3'-5' exonuclease A3K93_06400 PF02132 RecR protein A3K93_06400 PF13662 Toprim domain A3K93_06405 PF02575 YbaB/EbfC DNA-binding family A3K93_06410 PF01053 Cys/Met metabolism PLP-dependent enzyme A3K93_06420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A3K93_06420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A3K93_06430 PF01230 HIT domain A3K93_06435 PF00267 Gram-negative porin A3K93_06445 PF01654 Cytochrome bd terminal oxidase subunit I A3K93_06450 PF02322 Cytochrome bd terminal oxidase subunit II A3K93_06455 PF08173 Membrane bound YbgT-like protein A3K93_06475 PF01098 Cell cycle protein A3K93_06480 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A3K93_06485 PF04977 Septum formation initiator A3K93_06490 PF00113 Enolase, C-terminal TIM barrel domain A3K93_06490 PF03952 Enolase, N-terminal domain A3K93_06495 PF00793 DAHP synthetase I family A3K93_06500 PF06418 CTP synthase N-terminus A3K93_06500 PF00117 Glutamine amidotransferase class-I A3K93_06525 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_06525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A3K93_06540 PF02146 Sir2 family A3K93_06545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_06545 PF03466 LysR substrate binding domain A3K93_06550 PF00557 Metallopeptidase family M24 A3K93_06555 PF05525 Branched-chain amino acid transport protein A3K93_06575 PF03616 Sodium/glutamate symporter A3K93_06595 PF06434 Aconitate hydratase 2 N-terminus A3K93_06595 PF11791 Aconitate B N-terminal domain A3K93_06595 PF00330 Aconitase family (aconitate hydratase) A3K93_06615 PF00717 Peptidase S24-like A3K93_06620 PF00817 impB/mucB/samB family A3K93_06620 PF13438 Domain of unknown function (DUF4113) A3K93_06620 PF11799 impB/mucB/samB family C-terminal domain A3K93_06630 PF07244 Surface antigen variable number repeat A3K93_06630 PF01103 Surface antigen A3K93_06630 PF17243 POTRA domain TamA domain 1 A3K93_06635 PF07690 Major Facilitator Superfamily A3K93_06640 PF03232 Ubiquinone biosynthesis protein COQ7 A3K93_06655 PF02152 Dihydroneopterin aldolase A3K93_06660 PF03109 ABC1 family A3K93_06675 PF07690 Major Facilitator Superfamily A3K93_06685 PF00106 short chain dehydrogenase A3K93_06700 PF00528 Binding-protein-dependent transport system inner membrane component A3K93_06705 PF13847 Methyltransferase domain A3K93_06705 PF17827 PrmC N-terminal domain A3K93_06710 PF03462 PCRF domain A3K93_06710 PF00472 RF-1 domain A3K93_06725 PF00296 Luciferase-like monooxygenase A3K93_06735 PF00665 Integrase core domain A3K93_06735 PF13276 HTH-like domain A3K93_06735 PF13333 Integrase core domain A3K93_06745 PF03618 Kinase/pyrophosphorylase A3K93_06750 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A3K93_06750 PF02896 PEP-utilising enzyme, TIM barrel domain A3K93_06750 PF00391 PEP-utilising enzyme, mobile domain A3K93_06760 PF06481 COX Aromatic Rich Motif A3K93_06760 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A3K93_06765 PF00115 Cytochrome C and Quinol oxidase polypeptide I A3K93_06770 PF00510 Cytochrome c oxidase subunit III A3K93_06775 PF03626 Prokaryotic Cytochrome C oxidase subunit IV A3K93_06780 PF01040 UbiA prenyltransferase family A3K93_06785 PF01250 Ribosomal protein S6 A3K93_06790 PF01084 Ribosomal protein S18 A3K93_06795 PF03948 Ribosomal protein L9, C-terminal domain A3K93_06795 PF01281 Ribosomal protein L9, N-terminal domain A3K93_06800 PF03796 DnaB-like helicase C terminal domain A3K93_06800 PF00772 DnaB-like helicase N terminal domain A3K93_06805 PF01168 Alanine racemase, N-terminal domain A3K93_06805 PF00842 Alanine racemase, C-terminal domain A3K93_06820 PF01841 Transglutaminase-like superfamily A3K93_06820 PF08379 Bacterial transglutaminase-like N-terminal region A3K93_06830 PF14403 Circularly permuted ATP-grasp type 2 A3K93_06840 PF01645 Conserved region in glutamate synthase A3K93_06855 PF01565 FAD binding domain A3K93_06855 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A3K93_06860 PF01451 Low molecular weight phosphotyrosine protein phosphatase A3K93_06865 PF00465 Iron-containing alcohol dehydrogenase A3K93_06870 PF03061 Thioesterase superfamily A3K93_06875 PF12170 DNA polymerase III tau subunit V interacting with alpha A3K93_06875 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding A3K93_06875 PF12169 DNA polymerase III subunits gamma and tau domain III A3K93_06895 PF02803 Thiolase, C-terminal domain A3K93_06895 PF00108 Thiolase, N-terminal domain A3K93_06900 PF01609 Transposase DDE domain A3K93_06900 PF13006 Insertion element 4 transposase N-terminal A3K93_06915 PF03466 LysR substrate binding domain A3K93_06915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_06920 PF00923 Transaldolase/Fructose-6-phosphate aldolase A3K93_06925 PF01810 LysE type translocator A3K93_06930 PF00135 Carboxylesterase family A3K93_06935 PF00582 Universal stress protein family A3K93_06950 PF17432 Domain of unknown function (DUF3458_C) ARM repeats A3K93_06950 PF11940 Domain of unknown function (DUF3458) Ig-like fold A3K93_06950 PF01433 Peptidase family M1 domain A3K93_06980 PF00171 Aldehyde dehydrogenase family A3K93_06985 PF01274 Malate synthase A3K93_06990 PF03969 AFG1-like ATPase A3K93_07000 PF00743 Flavin-binding monooxygenase-like A3K93_07005 PF03956 Lysine exporter LysO A3K93_07010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A3K93_07020 PF00216 Bacterial DNA-binding protein A3K93_07025 PF00575 S1 RNA binding domain A3K93_07030 PF02224 Cytidylate kinase A3K93_07040 PF14437 MafB19-like deaminase A3K93_07050 PF03167 Uracil DNA glycosylase superfamily A3K93_07060 PF03934 Type II secretion system (T2SS), protein K A3K93_07065 PF07963 Prokaryotic N-terminal methylation motif A3K93_07065 PF11612 Type II secretion system (T2SS), protein J A3K93_07075 PF07963 Prokaryotic N-terminal methylation motif A3K93_07080 PF00440 Bacterial regulatory proteins, tetR family A3K93_07085 PF01026 TatD related DNase A3K93_07095 PF09115 DNA polymerase III, delta subunit, C terminal A3K93_07100 PF02348 Cytidylyltransferase A3K93_07105 PF02606 Tetraacyldisaccharide-1-P 4'-kinase A3K93_07110 PF00005 ABC transporter A3K93_07110 PF00664 ABC transporter transmembrane region A3K93_07120 PF01618 MotA/TolQ/ExbB proton channel family A3K93_07125 PF17762 HTH domain found in ParB protein A3K93_07125 PF02195 ParB-like nuclease domain A3K93_07130 PF13614 AAA domain A3K93_07135 PF02527 rRNA small subunit methyltransferase G A3K93_07140 PF00483 Nucleotidyl transferase A3K93_07145 PF01636 Phosphotransferase enzyme family A3K93_07150 PF04453 LPS transport system D A3K93_07150 PF03968 OstA-like protein A3K93_07155 PF00639 PPIC-type PPIASE domain A3K93_07155 PF09312 SurA N-terminal domain A3K93_07160 PF17209 Hfq protein A3K93_07170 PF08676 MutL C terminal dimerisation domain A3K93_07170 PF01119 DNA mismatch repair protein, C-terminal domain A3K93_07175 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE A3K93_07180 PF00849 RNA pseudouridylate synthase A3K93_07180 PF01479 S4 domain A3K93_07195 PF00849 RNA pseudouridylate synthase A3K93_07195 PF01479 S4 domain A3K93_07200 PF04284 Protein of unknown function (DUF441) A3K93_07210 PF14493 Helix-turn-helix domain A3K93_07210 PF05970 PIF1-like helicase A3K93_07225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A3K93_07225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A3K93_07230 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold A3K93_07230 PF04408 Helicase associated domain (HA2) A3K93_07230 PF11898 Domain of unknown function (DUF3418) A3K93_07230 PF00270 DEAD/DEAH box helicase A3K93_07230 PF00271 Helicase conserved C-terminal domain A3K93_07235 PF10417 C-terminal domain of 1-Cys peroxiredoxin A3K93_07235 PF00578 AhpC/TSA family A3K93_07245 PF15887 Putative zinc-binding metallo-peptidase A3K93_07245 PF10005 zinc-ribbon domain A3K93_07260 PF13192 Thioredoxin domain A3K93_07260 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_07275 PF01810 LysE type translocator A3K93_07285 PF02075 Crossover junction endodeoxyribonuclease RuvC A3K93_07295 PF01256 Carbohydrate kinase A3K93_07295 PF03853 YjeF-related protein N-terminus A3K93_07300 PF08331 Domain of unknown function (DUF1730) A3K93_07305 PF06968 Biotin and Thiamin Synthesis associated domain A3K93_07305 PF04055 Radical SAM superfamily A3K93_07330 PF01553 Acyltransferase A3K93_07335 PF01709 Transcriptional regulator A3K93_07350 PF13417 Glutathione S-transferase, N-terminal domain A3K93_07355 PF06071 Protein of unknown function (DUF933) A3K93_07355 PF01926 50S ribosome-binding GTPase A3K93_07375 PF03591 AzlC protein A3K93_07380 PF05437 Branched-chain amino acid transport protein (AzlD) A3K93_07385 PF02222 ATP-grasp domain A3K93_07390 PF01909 Nucleotidyltransferase domain A3K93_07390 PF01966 HD domain A3K93_07390 PF08335 GlnD PII-uridylyltransferase A3K93_07395 PF00155 Aminotransferase class I and II A3K93_07405 PF00255 Glutathione peroxidase A3K93_07410 PF01641 SelR domain A3K93_07415 PF00155 Aminotransferase class I and II A3K93_07425 PF00849 RNA pseudouridylate synthase A3K93_07430 PF00576 HIUase/Transthyretin family A3K93_07440 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A3K93_07440 PF01348 Type II intron maturase A3K93_07470 PF13007 Transposase C of IS166 homeodomain A3K93_07470 PF13817 IS66 C-terminal element A3K93_07470 PF13005 zinc-finger binding domain of transposase IS66 A3K93_07470 PF03050 Transposase IS66 family A3K93_07495 PF07943 Penicillin-binding protein 5, C-terminal domain A3K93_07495 PF00768 D-alanyl-D-alanine carboxypeptidase A3K93_07500 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_07505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A3K93_07525 PF01435 Peptidase family M48 A3K93_07530 PF00709 Adenylosuccinate synthetase A3K93_07535 PF13393 Histidyl-tRNA synthetase A3K93_07545 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A3K93_07545 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A3K93_07550 PF00884 Sulfatase A3K93_07550 PF08019 Phosphoethanolamine transferase EptA/EptB A3K93_07555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A3K93_07555 PF01411 tRNA synthetases class II (A) A3K93_07555 PF02272 DHHA1 domain A3K93_07560 PF01842 ACT domain A3K93_07560 PF00696 Amino acid kinase family A3K93_07560 PF13840 ACT domain A3K93_07565 PF02599 Global regulator protein family A3K93_07570 PF01351 Ribonuclease HII A3K93_07585 PF00962 Adenosine/AMP deaminase A3K93_07590 PF00860 Permease family A3K93_07595 PF03883 Peroxide stress protein YaaA A3K93_07610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A3K93_07615 PF00155 Aminotransferase class I and II A3K93_07620 PF01842 ACT domain A3K93_07620 PF00800 Prephenate dehydratase A3K93_07620 PF01817 Chorismate mutase type II A3K93_07625 PF01965 DJ-1/PfpI family A3K93_07630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A3K93_07630 PF02770 Acyl-CoA dehydrogenase, middle domain A3K93_07630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A3K93_07635 PF00375 Sodium:dicarboxylate symporter family A3K93_07640 PF00591 Glycosyl transferase family, a/b domain A3K93_07640 PF02885 Glycosyl transferase family, helical bundle domain A3K93_07645 PF07023 Protein of unknown function (DUF1315) A3K93_07650 PF01513 ATP-NAD kinase A3K93_07655 PF00905 Penicillin binding protein transpeptidase domain A3K93_07655 PF14814 Bifunctional transglycosylase second domain A3K93_07655 PF00912 Transglycosylase A3K93_07660 PF00293 NUDIX domain A3K93_07670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_07670 PF00512 His Kinase A (phospho-acceptor) domain A3K93_07670 PF08521 Two-component sensor kinase N-terminal A3K93_07675 PF00072 Response regulator receiver domain A3K93_07675 PF00486 Transcriptional regulatory protein, C terminal A3K93_07685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A3K93_07685 PF00437 Type II/IV secretion system protein A3K93_07690 PF13737 Transposase DDE domain A3K93_07695 PF18389 TrmO C-terminal domain A3K93_07695 PF01980 tRNA-methyltransferase O A3K93_07700 PF00175 Oxidoreductase NAD-binding domain A3K93_07700 PF00970 Oxidoreductase FAD-binding domain A3K93_07705 PF01011 PQQ enzyme repeat A3K93_07705 PF13360 PQQ-like domain A3K93_07715 PF00037 4Fe-4S binding domain A3K93_07720 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_07720 PF13192 Thioredoxin domain A3K93_07730 PF05816 Toxic anion resistance protein (TelA) A3K93_07755 PF14760 Rnk N-terminus A3K93_07755 PF01272 Transcription elongation factor, GreA/GreB, C-term A3K93_07760 PF00464 Serine hydroxymethyltransferase A3K93_07785 PF00132 Bacterial transferase hexapeptide (six repeats) A3K93_07785 PF12464 Maltose acetyltransferase A3K93_07785 PF14602 Hexapeptide repeat of succinyl-transferase A3K93_07790 PF13006 Insertion element 4 transposase N-terminal A3K93_07790 PF01609 Transposase DDE domain A3K93_07795 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding A3K93_07795 PF18381 YcaO cyclodehydratase C-terminal domain A3K93_07800 PF07690 Major Facilitator Superfamily A3K93_07810 PF00005 ABC transporter A3K93_07815 PF01061 ABC-2 type transporter A3K93_07820 PF14489 QueF-like protein A3K93_07820 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term A3K93_07830 PF13406 Transglycosylase SLT domain A3K93_07835 PF05036 Sporulation related domain A3K93_07835 PF03330 Lytic transglycolase A3K93_07850 PF01609 Transposase DDE domain A3K93_07850 PF13006 Insertion element 4 transposase N-terminal A3K93_07855 PF00889 Elongation factor TS A3K93_07860 PF00318 Ribosomal protein S2 A3K93_07865 PF00557 Metallopeptidase family M24 A3K93_07885 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) A3K93_07890 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ A3K93_07895 PF02565 Recombination protein O C terminal A3K93_07895 PF11967 Recombination protein O N terminal A3K93_07905 PF01926 50S ribosome-binding GTPase A3K93_07905 PF07650 KH domain A3K93_07910 PF00035 Double-stranded RNA binding motif A3K93_07910 PF14622 Ribonuclease-III-like A3K93_07920 PF10502 Signal peptidase, peptidase S26 A3K93_07925 PF00009 Elongation factor Tu GTP binding domain A3K93_07925 PF00679 Elongation factor G C-terminus A3K93_07925 PF06421 GTP-binding protein LepA C-terminus A3K93_07925 PF03144 Elongation factor Tu domain 2 A3K93_07935 PF17820 PDZ domain A3K93_07935 PF13180 PDZ domain A3K93_07940 PF02910 Fumarate reductase flavoprotein C-term A3K93_07940 PF00890 FAD binding domain A3K93_07960 PF02223 Thymidylate kinase A3K93_07965 PF02618 YceG-like family A3K93_07990 PF00528 Binding-protein-dependent transport system inner membrane component A3K93_07995 PF00528 Binding-protein-dependent transport system inner membrane component A3K93_08000 PF00005 ABC transporter A3K93_08000 PF12857 TOBE-like domain A3K93_08005 PF03466 LysR substrate binding domain A3K93_08005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_08015 PF00132 Bacterial transferase hexapeptide (six repeats) A3K93_08015 PF14602 Hexapeptide repeat of succinyl-transferase A3K93_08015 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal A3K93_08020 PF04055 Radical SAM superfamily A3K93_08025 PF06508 Queuosine biosynthesis protein QueC A3K93_08035 PF00578 AhpC/TSA family A3K93_08045 PF03466 LysR substrate binding domain A3K93_08045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_08050 PF04264 YceI-like domain A3K93_08055 PF01467 Cytidylyltransferase-like A3K93_08055 PF00293 NUDIX domain A3K93_08060 PF00378 Enoyl-CoA hydratase/isomerase A3K93_08065 PF00881 Nitroreductase family A3K93_08070 PF03055 Retinal pigment epithelial membrane protein A3K93_08075 PF01784 NIF3 (NGG1p interacting factor 3) A3K93_08080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_08080 PF03466 LysR substrate binding domain A3K93_08100 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal A3K93_08100 PF02769 AIR synthase related protein, C-terminal domain A3K93_08100 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain A3K93_08105 PF02225 PA domain A3K93_08105 PF04389 Peptidase family M28 A3K93_08110 PF01966 HD domain A3K93_08115 PF01330 RuvA N terminal domain A3K93_08115 PF07499 RuvA, C-terminal domain A3K93_08120 PF17864 RuvB AAA lid domain A3K93_08120 PF05491 RuvB C-terminal winged helix domain A3K93_08120 PF05496 Holliday junction DNA helicase RuvB P-loop domain A3K93_08130 PF03069 Acetamidase/Formamidase family A3K93_08140 PF03061 Thioesterase superfamily A3K93_08145 PF01618 MotA/TolQ/ExbB proton channel family A3K93_08150 PF02472 Biopolymer transport protein ExbD/TolR A3K93_08160 PF07676 WD40-like Beta Propeller Repeat A3K93_08160 PF04052 TolB amino-terminal domain A3K93_08165 PF00691 OmpA family A3K93_08175 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain A3K93_08180 PF08032 RNA 2'-O ribose methyltransferase substrate binding A3K93_08180 PF00588 SpoU rRNA Methylase family A3K93_08210 PF11638 DnaA N-terminal domain A3K93_08210 PF00308 Bacterial dnaA protein A3K93_08210 PF08299 Bacterial dnaA protein helix-turn-helix A3K93_08215 PF01594 AI-2E family transporter A3K93_08220 PF00586 AIR synthase related protein, N-terminal domain A3K93_08220 PF02769 AIR synthase related protein, C-terminal domain A3K93_08225 PF00551 Formyl transferase A3K93_08235 PF06965 Na+/H+ antiporter 1 A3K93_08235 PF01343 Peptidase family S49 A3K93_08245 PF13567 Domain of unknown function (DUF4131) A3K93_08245 PF00753 Metallo-beta-lactamase superfamily A3K93_08245 PF03772 Competence protein A3K93_08250 PF00005 ABC transporter A3K93_08255 PF12704 MacB-like periplasmic core domain A3K93_08255 PF02687 FtsX-like permease family A3K93_08265 PF00892 EamA-like transporter family A3K93_08270 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 A3K93_08280 PF00266 Aminotransferase class-V A3K93_08290 PF13533 Biotin-lipoyl like A3K93_08310 PF03989 DNA gyrase C-terminal domain, beta-propeller A3K93_08310 PF00521 DNA gyrase/topoisomerase IV, subunit A A3K93_08325 PF01012 Electron transfer flavoprotein domain A3K93_08325 PF00766 Electron transfer flavoprotein FAD-binding domain A3K93_08330 PF01012 Electron transfer flavoprotein domain A3K93_08335 PF01810 LysE type translocator A3K93_08340 PF01037 Lrp/AsnC ligand binding domain A3K93_08350 PF00589 Phage integrase family A3K93_08350 PF02899 Phage integrase, N-terminal SAM-like domain A3K93_08355 PF01678 Diaminopimelate epimerase A3K93_08360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A3K93_08360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A3K93_08370 PF00324 Amino acid permease A3K93_08375 PF01235 Sodium:alanine symporter family A3K93_08385 PF18073 Rubredoxin metal binding domain A3K93_08405 PF05221 S-adenosyl-L-homocysteine hydrolase A3K93_08405 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A3K93_08410 PF02219 Methylenetetrahydrofolate reductase A3K93_08415 PF04452 RNA methyltransferase A3K93_08420 PF03707 Bacterial signalling protein N terminal repeat A3K93_08420 PF00990 Diguanylate cyclase, GGDEF domain A3K93_08420 PF00563 EAL domain A3K93_08425 PF00390 Malic enzyme, N-terminal domain A3K93_08425 PF03949 Malic enzyme, NAD binding domain A3K93_08425 PF01515 Phosphate acetyl/butaryl transferase A3K93_08430 PF01743 Poly A polymerase head domain A3K93_08430 PF12627 Probable RNA and SrmB- binding site of polymerase A A3K93_08440 PF00152 tRNA synthetases class II (D, K and N) A3K93_08445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A3K93_08445 PF11890 Domain of unknown function (DUF3410) A3K93_08445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A3K93_08460 PF01272 Transcription elongation factor, GreA/GreB, C-term A3K93_08460 PF03449 Transcription elongation factor, N-terminal A3K93_08465 PF01464 Transglycosylase SLT domain A3K93_08465 PF00497 Bacterial extracellular solute-binding proteins, family 3 A3K93_08475 PF01171 PP-loop family A3K93_08480 PF01464 Transglycosylase SLT domain A3K93_08480 PF10145 Phage-related minor tail protein A3K93_08480 PF01551 Peptidase family M23 A3K93_08485 PF01435 Peptidase family M48 A3K93_08490 PF13006 Insertion element 4 transposase N-terminal A3K93_08490 PF01609 Transposase DDE domain A3K93_08500 PF13737 Transposase DDE domain A3K93_08510 PF03448 MgtE intracellular N domain A3K93_08510 PF01769 Divalent cation transporter A3K93_08510 PF00571 CBS domain A3K93_08515 PF00873 AcrB/AcrD/AcrF family A3K93_08520 PF00463 Isocitrate lyase family A3K93_08525 PF03466 LysR substrate binding domain A3K93_08525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_08530 PF00571 CBS domain A3K93_08530 PF03471 Transporter associated domain A3K93_08530 PF01595 Cyclin M transmembrane N-terminal domain A3K93_08560 PF01609 Transposase DDE domain A3K93_08560 PF13006 Insertion element 4 transposase N-terminal A3K93_08570 PF00809 Pterin binding enzyme A3K93_08580 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) A3K93_08580 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 A3K93_08585 PF06480 FtsH Extracellular A3K93_08585 PF17862 AAA+ lid domain A3K93_08585 PF00004 ATPase family associated with various cellular activities (AAA) A3K93_08585 PF01434 Peptidase family M41 A3K93_08590 PF01728 FtsJ-like methyltransferase A3K93_08595 PF01985 CRS1 / YhbY (CRM) domain A3K93_08610 PF00117 Glutamine amidotransferase class-I A3K93_08610 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A3K93_08615 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A3K93_08615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A3K93_08615 PF02142 MGS-like domain A3K93_08620 PF01272 Transcription elongation factor, GreA/GreB, C-term A3K93_08620 PF03449 Transcription elongation factor, N-terminal A3K93_08625 PF00132 Bacterial transferase hexapeptide (six repeats) A3K93_08645 PF00037 4Fe-4S binding domain A3K93_08650 PF01467 Cytidylyltransferase-like A3K93_08655 PF01668 SmpB protein A3K93_08660 PF03358 NADPH-dependent FMN reductase A3K93_08670 PF01479 S4 domain A3K93_08670 PF00849 RNA pseudouridylate synthase A3K93_08675 PF13525 Outer membrane lipoprotein A3K93_08680 PF08278 DNA primase DnaG DnaB-binding A3K93_08680 PF01807 CHC2 zinc finger A3K93_08680 PF10410 DnaB-helicase binding domain of primase A3K93_08680 PF08275 DNA primase catalytic core, N-terminal domain A3K93_08685 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain A3K93_08685 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain A3K93_08685 PF01488 Shikimate / quinate 5-dehydrogenase A3K93_08695 PF03550 Outer membrane lipoprotein LolB A3K93_08700 PF08544 GHMP kinases C terminal A3K93_08700 PF00288 GHMP kinases N terminal domain A3K93_08725 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A3K93_08725 PF14572 Phosphoribosyl synthetase-associated domain A3K93_08730 PF01386 Ribosomal L25p family A3K93_08735 PF01195 Peptidyl-tRNA hydrolase A3K93_08740 PF02261 Aspartate decarboxylase A3K93_08745 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A3K93_08770 PF09335 SNARE associated Golgi protein A3K93_08785 PF03979 Sigma-70 factor, region 1.1 A3K93_08785 PF04542 Sigma-70 region 2 A3K93_08785 PF04546 Sigma-70, non-essential region A3K93_08785 PF04545 Sigma-70, region 4 A3K93_08785 PF04539 Sigma-70 region 3 A3K93_08785 PF00140 Sigma-70 factor, region 1.2 A3K93_08795 PF03099 Biotin/lipoate A/B protein ligase family A3K93_08805 PF00465 Iron-containing alcohol dehydrogenase A3K93_08810 PF13520 Amino acid permease A3K93_08820 PF00588 SpoU rRNA Methylase family A3K93_08825 PF10414 Sirohaem synthase dimerisation region A3K93_08825 PF14824 Sirohaem biosynthesis protein central A3K93_08825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A3K93_08830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A3K93_08830 PF02403 Seryl-tRNA synthetase N-terminal domain A3K93_08840 PF03548 Outer membrane lipoprotein carrier protein LolA A3K93_08845 PF01016 Ribosomal L27 protein A3K93_08850 PF00829 Ribosomal prokaryotic L21 protein A3K93_08855 PF00348 Polyprenyl synthetase A3K93_08865 PF01569 PAP2 superfamily A3K93_08870 PF00529 HlyD membrane-fusion protein of T1SS A3K93_08870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A3K93_08875 PF00873 AcrB/AcrD/AcrF family A3K93_08880 PF02321 Outer membrane efflux protein A3K93_08885 PF01906 Putative heavy-metal-binding A3K93_08890 PF01906 Putative heavy-metal-binding A3K93_08895 PF01327 Polypeptide deformylase A3K93_08900 PF00083 Sugar (and other) transporter A3K93_08925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A3K93_08930 PF07152 YaeQ protein A3K93_08935 PF07683 Cobalamin synthesis protein cobW C-terminal domain A3K93_08935 PF02492 CobW/HypB/UreG, nucleotide-binding domain A3K93_08945 PF01494 FAD binding domain A3K93_08950 PF03466 LysR substrate binding domain A3K93_08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_08955 PF03061 Thioesterase superfamily A3K93_08960 PF01734 Patatin-like phospholipase A3K93_08965 PF01235 Sodium:alanine symporter family A3K93_08970 PF03616 Sodium/glutamate symporter A3K93_08975 PF07690 Major Facilitator Superfamily A3K93_08980 PF12805 FUSC-like inner membrane protein yccS A3K93_08990 PF00258 Flavodoxin A3K93_08990 PF00667 FAD binding domain A3K93_08990 PF00175 Oxidoreductase NAD-binding domain A3K93_09050 PF04304 Protein of unknown function (DUF454) A3K93_09065 PF07687 Peptidase dimerisation domain A3K93_09065 PF01546 Peptidase family M20/M25/M40 A3K93_09075 PF00072 Response regulator receiver domain A3K93_09075 PF01627 Hpt domain A3K93_09075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_09075 PF01584 CheW-like domain A3K93_09080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A3K93_09080 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term A3K93_09085 PF01584 CheW-like domain A3K93_09090 PF00072 Response regulator receiver domain A3K93_09095 PF00072 Response regulator receiver domain A3K93_09105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A3K93_09110 PF00873 AcrB/AcrD/AcrF family A3K93_09115 PF03129 Anticodon binding domain A3K93_09115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A3K93_09115 PF04073 Aminoacyl-tRNA editing domain A3K93_09140 PF00692 dUTPase A3K93_09145 PF10609 NUBPL iron-transfer P-loop NTPase A3K93_09160 PF09334 tRNA synthetases class I (M) A3K93_09160 PF01588 Putative tRNA binding domain A3K93_09205 PF05552 Conserved TM helix A3K93_09220 PF00175 Oxidoreductase NAD-binding domain A3K93_09220 PF00970 Oxidoreductase FAD-binding domain A3K93_09225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_09225 PF03466 LysR substrate binding domain A3K93_09240 PF00361 Proton-conducting membrane transporter A3K93_09245 PF00361 Proton-conducting membrane transporter A3K93_09250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A3K93_09250 PF00361 Proton-conducting membrane transporter A3K93_09255 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A3K93_09260 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 A3K93_09265 PF12838 4Fe-4S dicluster domain A3K93_09270 PF00146 NADH dehydrogenase A3K93_09275 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A3K93_09275 PF00384 Molybdopterin oxidoreductase A3K93_09275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A3K93_09280 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A3K93_09280 PF10531 SLBB domain A3K93_09280 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A3K93_09290 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A3K93_09290 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A3K93_09295 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A3K93_09300 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 A3K93_09310 PF00672 HAMP domain A3K93_09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_09310 PF00512 His Kinase A (phospho-acceptor) domain A3K93_09315 PF00486 Transcriptional regulatory protein, C terminal A3K93_09315 PF00072 Response regulator receiver domain A3K93_09320 PF00317 Ribonucleotide reductase, all-alpha domain A3K93_09320 PF02867 Ribonucleotide reductase, barrel domain A3K93_09320 PF03477 ATP cone domain A3K93_09325 PF00268 Ribonucleotide reductase, small chain A3K93_09340 PF00440 Bacterial regulatory proteins, tetR family A3K93_09350 PF07715 TonB-dependent Receptor Plug Domain A3K93_09350 PF00593 TonB dependent receptor A3K93_09355 PF01011 PQQ enzyme repeat A3K93_09360 PF04966 Carbohydrate-selective porin, OprB family A3K93_09365 PF13006 Insertion element 4 transposase N-terminal A3K93_09365 PF01609 Transposase DDE domain A3K93_09380 PF13419 Haloacid dehalogenase-like hydrolase A3K93_09395 PF08274 PhnA Zinc-Ribbon A3K93_09395 PF03831 PhnA domain A3K93_09415 PF00849 RNA pseudouridylate synthase A3K93_09445 PF13737 Transposase DDE domain A3K93_09460 PF00330 Aconitase family (aconitate hydratase) A3K93_09460 PF00694 Aconitase C-terminal domain A3K93_09465 PF01571 Aminomethyltransferase folate-binding domain A3K93_09490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A3K93_09495 PF04966 Carbohydrate-selective porin, OprB family A3K93_09500 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A3K93_09500 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A3K93_09500 PF06827 Zinc finger found in FPG and IleRS A3K93_09505 PF00639 PPIC-type PPIASE domain A3K93_09505 PF09312 SurA N-terminal domain A3K93_09510 PF01609 Transposase DDE domain A3K93_09510 PF13006 Insertion element 4 transposase N-terminal A3K93_09515 PF01741 Large-conductance mechanosensitive channel, MscL A3K93_09525 PF00860 Permease family A3K93_09530 PF08468 Methyltransferase small domain N-terminal A3K93_09530 PF05175 Methyltransferase small domain A3K93_09535 PF00324 Amino acid permease A3K93_09545 PF13505 Outer membrane protein beta-barrel domain A3K93_09545 PF00691 OmpA family A3K93_09555 PF02803 Thiolase, C-terminal domain A3K93_09555 PF00108 Thiolase, N-terminal domain A3K93_09565 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A3K93_09565 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A3K93_09570 PF02515 CoA-transferase family III A3K93_09575 PF12833 Helix-turn-helix domain A3K93_09575 PF02311 AraC-like ligand binding domain A3K93_09580 PF00108 Thiolase, N-terminal domain A3K93_09580 PF02803 Thiolase, C-terminal domain A3K93_09585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A3K93_09585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A3K93_09585 PF00378 Enoyl-CoA hydratase/isomerase A3K93_09605 PF03006 Haemolysin-III related A3K93_09610 PF00083 Sugar (and other) transporter A3K93_09610 PF07690 Major Facilitator Superfamily A3K93_09625 PF13091 PLD-like domain A3K93_09635 PF13167 GTP-binding GTPase N-terminal A3K93_09635 PF16360 GTP-binding GTPase Middle Region A3K93_09635 PF01926 50S ribosome-binding GTPase A3K93_09660 PF00149 Calcineurin-like phosphoesterase A3K93_09665 PF00398 Ribosomal RNA adenine dimethylase A3K93_09670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A3K93_09675 PF00572 Ribosomal protein L13 A3K93_09680 PF00380 Ribosomal protein S9/S16 A3K93_09690 PF00665 Integrase core domain A3K93_09690 PF13276 HTH-like domain A3K93_09690 PF13333 Integrase core domain A3K93_09695 PF02798 Glutathione S-transferase, N-terminal domain A3K93_09695 PF00043 Glutathione S-transferase, C-terminal domain A3K93_09700 PF04386 Stringent starvation protein B A3K93_09710 PF13737 Transposase DDE domain A3K93_09760 PF00795 Carbon-nitrogen hydrolase A3K93_09765 PF02566 OsmC-like protein A3K93_09770 PF00437 Type II/IV secretion system protein A3K93_09790 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A3K93_09790 PF00476 DNA polymerase family A A3K93_09790 PF01367 5'-3' exonuclease, C-terminal SAM fold A3K93_09790 PF01612 3'-5' exonuclease A3K93_09795 PF02325 YGGT family A3K93_09800 PF03807 NADP oxidoreductase coenzyme F420-dependent A3K93_09800 PF14748 Pyrroline-5-carboxylate reductase dimerisation A3K93_09805 PF01171 PP-loop family A3K93_09805 PF09179 TilS substrate binding domain A3K93_09805 PF11734 TilS substrate C-terminal domain A3K93_09810 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit A3K93_09815 PF02541 Ppx/GppA phosphatase family A3K93_09820 PF00085 Thioredoxin A3K93_09825 PF07498 Rho termination factor, N-terminal domain A3K93_09825 PF07497 Rho termination factor, RNA-binding domain A3K93_09825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A3K93_09835 PF00216 Bacterial DNA-binding protein A3K93_09840 PF03483 B3/4 domain A3K93_09840 PF03147 Ferredoxin-fold anticodon binding domain A3K93_09840 PF03484 tRNA synthetase B5 domain A3K93_09840 PF01588 Putative tRNA binding domain A3K93_09840 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A3K93_09845 PF01409 tRNA synthetases class II core domain (F) A3K93_09845 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A3K93_09865 PF00453 Ribosomal protein L20 A3K93_09870 PF01632 Ribosomal protein L35 A3K93_09875 PF07690 Major Facilitator Superfamily A3K93_09885 PF09335 SNARE associated Golgi protein A3K93_09895 PF00043 Glutathione S-transferase, C-terminal domain A3K93_09895 PF02798 Glutathione S-transferase, N-terminal domain A3K93_09900 PF00011 Hsp20/alpha crystallin family A3K93_09910 PF05198 Translation initiation factor IF-3, N-terminal domain A3K93_09910 PF00707 Translation initiation factor IF-3, C-terminal domain A3K93_09915 PF02824 TGS domain A3K93_09915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A3K93_09915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A3K93_09915 PF03129 Anticodon binding domain A3K93_09930 PF01565 FAD binding domain A3K93_09930 PF04030 D-arabinono-1,4-lactone oxidase A3K93_09935 PF00501 AMP-binding enzyme A3K93_09935 PF13193 AMP-binding enzyme C-terminal domain A3K93_09940 PF02547 Queuosine biosynthesis protein A3K93_09955 PF04011 LemA family A3K93_09965 PF01702 Queuine tRNA-ribosyltransferase A3K93_09970 PF02699 Preprotein translocase subunit A3K93_09975 PF07549 SecD/SecF GG Motif A3K93_09975 PF02355 Protein export membrane protein A3K93_09975 PF13721 SecD export protein N-terminal TM region A3K93_09980 PF07549 SecD/SecF GG Motif A3K93_09980 PF02355 Protein export membrane protein A3K93_09990 PF13291 ACT domain A3K93_09990 PF04607 Region found in RelA / SpoT proteins A3K93_09990 PF02824 TGS domain A3K93_09995 PF05958 tRNA (Uracil-5-)-methyltransferase A3K93_10005 PF00291 Pyridoxal-phosphate dependent enzyme A3K93_10010 PF00072 Response regulator receiver domain A3K93_10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_10010 PF00512 His Kinase A (phospho-acceptor) domain A3K93_10010 PF01627 Hpt domain A3K93_10010 PF00672 HAMP domain A3K93_10010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A3K93_10015 PF00378 Enoyl-CoA hydratase/isomerase A3K93_10020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A3K93_10020 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A3K93_10025 PF01261 Xylose isomerase-like TIM barrel A3K93_10040 PF00672 HAMP domain A3K93_10040 PF00909 Ammonium Transporter Family A3K93_10045 PF02233 NAD(P) transhydrogenase beta subunit A3K93_10050 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch A3K93_10055 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A3K93_10055 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A3K93_10060 PF07690 Major Facilitator Superfamily A3K93_10065 PF01207 Dihydrouridine synthase (Dus) A3K93_10075 PF04127 DNA / pantothenate metabolism flavoprotein A3K93_10075 PF02441 Flavoprotein A3K93_10080 PF04002 RadC-like JAB domain A3K93_10085 PF01062 Bestrophin, RFP-TM, chloride channel A3K93_10095 PF02811 PHP domain A3K93_10100 PF04279 Intracellular septation protein A A3K93_10105 PF03795 YCII-related domain A3K93_10115 PF01266 FAD dependent oxidoreductase A3K93_10115 PF05430 S-adenosyl-L-methionine-dependent methyltransferase A3K93_10125 PF04461 Protein of unknown function (DUF520) A3K93_10135 PF03061 Thioesterase superfamily A3K93_10140 PF00085 Thioredoxin A3K93_10150 PF00753 Metallo-beta-lactamase superfamily A3K93_10150 PF04273 Putative phosphatase (DUF442) A3K93_10160 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_10160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A3K93_10200 PF01066 CDP-alcohol phosphatidyltransferase A3K93_10205 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ A3K93_10220 PF01609 Transposase DDE domain A3K93_10220 PF13006 Insertion element 4 transposase N-terminal A3K93_10235 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A3K93_10235 PF00056 lactate/malate dehydrogenase, NAD binding domain A3K93_10245 PF01464 Transglycosylase SLT domain A3K93_10245 PF10145 Phage-related minor tail protein A3K93_10245 PF01551 Peptidase family M23 A3K93_10250 PF04055 Radical SAM superfamily A3K93_10250 PF00919 Uncharacterized protein family UPF0004 A3K93_10250 PF01938 TRAM domain A3K93_10255 PF02562 PhoH-like protein A3K93_10260 PF02130 Uncharacterized protein family UPF0054 A3K93_10300 PF03358 NADPH-dependent FMN reductase A3K93_10305 PF03631 Virulence factor BrkB A3K93_10315 PF01557 Fumarylacetoacetate (FAA) hydrolase family A3K93_10350 PF00773 RNB domain A3K93_10350 PF08206 Ribonuclease B OB domain A3K93_10350 PF00575 S1 RNA binding domain A3K93_10350 PF08461 Ribonuclease R winged-helix domain A3K93_10350 PF17876 Cold shock domain A3K93_10360 PF01432 Peptidase family M3 A3K93_10365 PF09526 Probable metal-binding protein (DUF2387) A3K93_10400 PF03937 Flavinator of succinate dehydrogenase A3K93_10405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A3K93_10405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A3K93_10405 PF02770 Acyl-CoA dehydrogenase, middle domain A3K93_10410 PF00743 Flavin-binding monooxygenase-like A3K93_10415 PF01196 Ribosomal protein L17 A3K93_10420 PF01000 RNA polymerase Rpb3/RpoA insert domain A3K93_10420 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain A3K93_10420 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain A3K93_10425 PF01479 S4 domain A3K93_10425 PF00163 Ribosomal protein S4/S9 N-terminal domain A3K93_10430 PF00411 Ribosomal protein S11 A3K93_10435 PF00416 Ribosomal protein S13/S18 A3K93_10440 PF00444 Ribosomal protein L36 A3K93_10445 PF00344 SecY translocase A3K93_10450 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A A3K93_10455 PF00327 Ribosomal protein L30p/L7e A3K93_10460 PF00333 Ribosomal protein S5, N-terminal domain A3K93_10460 PF03719 Ribosomal protein S5, C-terminal domain A3K93_10465 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A3K93_10470 PF00347 Ribosomal protein L6 A3K93_10475 PF00410 Ribosomal protein S8 A3K93_10480 PF00253 Ribosomal protein S14p/S29e A3K93_10485 PF00673 ribosomal L5P family C-terminus A3K93_10485 PF00281 Ribosomal protein L5 A3K93_10490 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 A3K93_10490 PF00467 KOW motif A3K93_10495 PF00238 Ribosomal protein L14p/L23e A3K93_10500 PF00366 Ribosomal protein S17 A3K93_10505 PF00831 Ribosomal L29 protein A3K93_10510 PF00252 Ribosomal protein L16p/L10e A3K93_10515 PF00189 Ribosomal protein S3, C-terminal domain A3K93_10515 PF07650 KH domain A3K93_10520 PF00237 Ribosomal protein L22p/L17e A3K93_10525 PF00203 Ribosomal protein S19 A3K93_10530 PF00181 Ribosomal Proteins L2, RNA binding domain A3K93_10530 PF03947 Ribosomal Proteins L2, C-terminal domain A3K93_10535 PF00276 Ribosomal protein L23 A3K93_10540 PF00573 Ribosomal protein L4/L1 family A3K93_10545 PF00297 Ribosomal protein L3 A3K93_10550 PF00338 Ribosomal protein S10p/S20e A3K93_10555 PF00117 Glutamine amidotransferase class-I A3K93_10560 PF01053 Cys/Met metabolism PLP-dependent enzyme A3K93_10565 PF05872 Bacterial protein of unknown function (DUF853) A3K93_10570 PF00970 Oxidoreductase FAD-binding domain A3K93_10570 PF00175 Oxidoreductase NAD-binding domain A3K93_10570 PF00042 Globin A3K93_10575 PF02082 Transcriptional regulator A3K93_10580 PF01926 50S ribosome-binding GTPase A3K93_10590 PF00375 Sodium:dicarboxylate symporter family A3K93_10600 PF01553 Acyltransferase A3K93_10610 PF17191 RecG wedge domain A3K93_10610 PF00270 DEAD/DEAH box helicase A3K93_10610 PF00271 Helicase conserved C-terminal domain A3K93_10615 PF00156 Phosphoribosyl transferase domain A3K93_10625 PF03641 Possible lysine decarboxylase A3K93_10630 PF01544 CorA-like Mg2+ transporter protein A3K93_10640 PF05494 MlaC protein A3K93_10650 PF02405 Permease MlaE A3K93_10655 PF00005 ABC transporter A3K93_10660 PF00271 Helicase conserved C-terminal domain A3K93_10660 PF00270 DEAD/DEAH box helicase A3K93_10665 PF00459 Inositol monophosphatase family A3K93_10670 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A3K93_10670 PF02779 Transketolase, pyrimidine binding domain A3K93_10670 PF02780 Transketolase, C-terminal domain A3K93_10675 PF00925 GTP cyclohydrolase II A3K93_10680 PF04055 Radical SAM superfamily A3K93_10680 PF06969 HemN C-terminal domain A3K93_10695 PF08501 Shikimate dehydrogenase substrate binding domain A3K93_10695 PF01488 Shikimate / quinate 5-dehydrogenase A3K93_10695 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A3K93_10700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A3K93_10700 PF12806 Acetyl-CoA dehydrogenase C-terminal like A3K93_10700 PF02770 Acyl-CoA dehydrogenase, middle domain A3K93_10700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A3K93_10710 PF00313 'Cold-shock' DNA-binding domain A3K93_10720 PF04055 Radical SAM superfamily A3K93_10720 PF06969 HemN C-terminal domain A3K93_10730 PF01554 MatE A3K93_10740 PF03109 ABC1 family A3K93_10745 PF01197 Ribosomal protein L31 A3K93_10750 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A3K93_10765 PF01209 ubiE/COQ5 methyltransferase family A3K93_10780 PF13614 AAA domain A3K93_10785 PF01594 AI-2E family transporter A3K93_10790 PF00080 Copper/zinc superoxide dismutase (SODC) A3K93_10795 PF12823 Domain of unknown function (DUF3817) A3K93_10815 PF01565 FAD binding domain A3K93_10815 PF02913 FAD linked oxidases, C-terminal domain A3K93_10820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A3K93_10820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A3K93_10825 PF00892 EamA-like transporter family A3K93_10830 PF00892 EamA-like transporter family A3K93_10840 PF01925 Sulfite exporter TauE/SafE A3K93_10845 PF09157 Pseudouridine synthase II TruB, C-terminal A3K93_10845 PF01509 TruB family pseudouridylate synthase (N terminal domain) A3K93_10845 PF16198 tRNA pseudouridylate synthase B C-terminal domain A3K93_10850 PF03280 Proteobacterial lipase chaperone protein A3K93_10855 PF00561 alpha/beta hydrolase fold A3K93_10860 PF00561 alpha/beta hydrolase fold A3K93_10865 PF00561 alpha/beta hydrolase fold A3K93_10870 PF00561 alpha/beta hydrolase fold A3K93_10890 PF01348 Type II intron maturase A3K93_10890 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A3K93_10900 PF01245 Ribosomal protein L19 A3K93_10905 PF01746 tRNA (Guanine-1)-methyltransferase A3K93_10910 PF01782 RimM N-terminal domain A3K93_10910 PF05239 PRC-barrel domain A3K93_10915 PF00886 Ribosomal protein S16 A3K93_10920 PF12323 Helix-turn-helix domain A3K93_10920 PF07282 Putative transposase DNA-binding domain A3K93_10920 PF01385 Probable transposase A3K93_10935 PF07963 Prokaryotic N-terminal methylation motif A3K93_10935 PF00114 Pilin (bacterial filament) A3K93_10950 PF07963 Prokaryotic N-terminal methylation motif A3K93_10950 PF00114 Pilin (bacterial filament) A3K93_10955 PF02401 LytB protein A3K93_10960 PF00625 Guanylate kinase A3K93_10965 PF01192 RNA polymerase Rpb6 A3K93_10970 PF13291 ACT domain A3K93_10970 PF04607 Region found in RelA / SpoT proteins A3K93_10970 PF02824 TGS domain A3K93_10975 PF01042 Endoribonuclease L-PSP A3K93_10980 PF04324 BFD-like [2Fe-2S] binding domain A3K93_10985 PF00210 Ferritin-like domain A3K93_10990 PF15864 Protein glycosylation ligase A3K93_10990 PF11846 Virulence factor membrane-bound polymerase, C-terminal A3K93_10990 PF04932 O-Antigen ligase A3K93_11010 PF01527 Transposase A3K93_11015 PF13683 Integrase core domain A3K93_11015 PF13276 HTH-like domain A3K93_11020 PF07963 Prokaryotic N-terminal methylation motif A3K93_11020 PF00114 Pilin (bacterial filament) A3K93_11025 PF01757 Acyltransferase family A3K93_11045 PF01348 Type II intron maturase A3K93_11045 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A3K93_11055 PF00114 Pilin (bacterial filament) A3K93_11055 PF07963 Prokaryotic N-terminal methylation motif A3K93_11060 PF13737 Transposase DDE domain A3K93_11070 PF00534 Glycosyl transferases group 1 A3K93_11070 PF13439 Glycosyltransferase Family 4 A3K93_11080 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase A3K93_11085 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A3K93_11090 PF04991 LicD family A3K93_11115 PF00005 ABC transporter A3K93_11115 PF00664 ABC transporter transmembrane region A3K93_11120 PF00535 Glycosyl transferase family 2 A3K93_11130 PF13737 Transposase DDE domain A3K93_11150 PF04011 LemA family A3K93_11160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A3K93_11160 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_11165 PF00310 Glutamine amidotransferases class-II A3K93_11165 PF04898 Glutamate synthase central domain A3K93_11165 PF01645 Conserved region in glutamate synthase A3K93_11165 PF01493 GXGXG motif A3K93_11175 PF01761 3-dehydroquinate synthase A3K93_11180 PF01202 Shikimate kinase A3K93_11185 PF07660 Secretin and TonB N terminus short domain A3K93_11185 PF03958 Bacterial type II/III secretion system short domain A3K93_11185 PF00263 Bacterial type II and III secretion system protein A3K93_11185 PF11741 AMIN domain A3K93_11210 PF17092 Penicillin-binding protein OB-like domain A3K93_11210 PF00905 Penicillin binding protein transpeptidase domain A3K93_11210 PF00912 Transglycosylase A3K93_11215 PF13847 Methyltransferase domain A3K93_11220 PF00953 Glycosyl transferase family 4 A3K93_11225 PF08245 Mur ligase middle domain A3K93_11225 PF02875 Mur ligase family, glutamate ligase domain A3K93_11225 PF01225 Mur ligase family, catalytic domain A3K93_11230 PF02875 Mur ligase family, glutamate ligase domain A3K93_11230 PF08245 Mur ligase middle domain A3K93_11230 PF01225 Mur ligase family, catalytic domain A3K93_11235 PF00905 Penicillin binding protein transpeptidase domain A3K93_11235 PF03717 Penicillin-binding Protein dimerisation domain A3K93_11245 PF01795 MraW methylase family A3K93_11255 PF00665 Integrase core domain A3K93_11255 PF13333 Integrase core domain A3K93_11255 PF13276 HTH-like domain A3K93_11280 PF00749 tRNA synthetases class I (E and Q), catalytic domain A3K93_11295 PF00005 ABC transporter A3K93_11295 PF12848 ABC transporter A3K93_11300 PF01053 Cys/Met metabolism PLP-dependent enzyme A3K93_11305 PF00106 short chain dehydrogenase A3K93_11310 PF01502 Phosphoribosyl-AMP cyclohydrolase A3K93_11320 PF07282 Putative transposase DNA-binding domain A3K93_11320 PF01385 Probable transposase A3K93_11320 PF12323 Helix-turn-helix domain A3K93_11335 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A3K93_11335 PF00361 Proton-conducting membrane transporter A3K93_11335 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter A3K93_11335 PF13244 Domain of unknown function (DUF4040) A3K93_11340 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A3K93_11345 PF00361 Proton-conducting membrane transporter A3K93_11350 PF01899 Na+/H+ ion antiporter subunit A3K93_11355 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) A3K93_11365 PF02033 Ribosome-binding factor A A3K93_11370 PF11987 Translation-initiation factor 2 A3K93_11370 PF00009 Elongation factor Tu GTP binding domain A3K93_11370 PF08364 Bacterial translation initiation factor IF-2 associated region A3K93_11370 PF04760 Translation initiation factor IF-2, N-terminal region A3K93_11375 PF08529 NusA N-terminal domain A3K93_11375 PF00575 S1 RNA binding domain A3K93_11375 PF13184 NusA-like KH domain A3K93_11380 PF02576 RimP N-terminal domain A3K93_11380 PF17384 RimP C-terminal SH3 domain A3K93_11410 PF03840 Preprotein translocase SecG subunit A3K93_11415 PF00121 Triosephosphate isomerase A3K93_11420 PF00437 Type II/IV secretion system protein A3K93_11420 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A3K93_11425 PF00482 Type II secretion system (T2SS), protein F A3K93_11430 PF01478 Type IV leader peptidase family A3K93_11430 PF06750 Bacterial Peptidase A24 N-terminal domain A3K93_11435 PF01121 Dephospho-CoA kinase A3K93_11440 PF00892 EamA-like transporter family A3K93_11445 PF00588 SpoU rRNA Methylase family A3K93_11445 PF08032 RNA 2'-O ribose methyltransferase substrate binding A3K93_11450 PF06865 Pyrimidine/purine nucleoside phosphorylase A3K93_11455 PF02463 RecF/RecN/SMC N terminal domain A3K93_11460 PF02622 Uncharacterized ACR, COG1678 A3K93_11465 PF03652 Holliday junction resolvase A3K93_11470 PF13533 Biotin-lipoyl like A3K93_11480 PF04632 Fusaric acid resistance protein family A3K93_11495 PF00005 ABC transporter A3K93_11495 PF00664 ABC transporter transmembrane region A3K93_11500 PF01895 PhoU domain A3K93_11505 PF02321 Outer membrane efflux protein A3K93_11520 PF00293 NUDIX domain A3K93_11525 PF00149 Calcineurin-like phosphoesterase A3K93_11530 PF01258 Prokaryotic dksA/traR C4-type zinc finger A3K93_11535 PF00749 tRNA synthetases class I (E and Q), catalytic domain A3K93_11545 PF01098 Cell cycle protein A3K93_11550 PF02875 Mur ligase family, glutamate ligase domain A3K93_11550 PF08245 Mur ligase middle domain A3K93_11560 PF07664 Ferrous iron transport protein B C terminus A3K93_11560 PF02421 Ferrous iron transport protein B A3K93_11560 PF07670 Nucleoside recognition A3K93_11570 PF02899 Phage integrase, N-terminal SAM-like domain A3K93_11570 PF00589 Phage integrase family A3K93_11575 PF12323 Helix-turn-helix domain A3K93_11575 PF01385 Probable transposase A3K93_11575 PF07282 Putative transposase DNA-binding domain A3K93_11585 PF10411 Disulfide bond isomerase protein N-terminus A3K93_11585 PF13098 Thioredoxin-like domain A3K93_11590 PF03447 Homoserine dehydrogenase, NAD binding domain A3K93_11590 PF01842 ACT domain A3K93_11590 PF00742 Homoserine dehydrogenase A3K93_11595 PF00291 Pyridoxal-phosphate dependent enzyme A3K93_11600 PF00768 D-alanyl-D-alanine carboxypeptidase A3K93_11605 PF00196 Bacterial regulatory proteins, luxR family A3K93_11605 PF00072 Response regulator receiver domain A3K93_11610 PF00989 PAS fold A3K93_11610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_11610 PF00512 His Kinase A (phospho-acceptor) domain A3K93_11615 PF02954 Bacterial regulatory protein, Fis family A3K93_11615 PF00158 Sigma-54 interaction domain A3K93_11615 PF00072 Response regulator receiver domain A3K93_11620 PF03572 Peptidase family S41 A3K93_11620 PF00595 PDZ domain A3K93_11625 PF01676 Metalloenzyme superfamily A3K93_11625 PF06415 BPG-independent PGAM N-terminus (iPGM_N) A3K93_11630 PF03739 Lipopolysaccharide export system permease LptF/LptG A3K93_11635 PF03739 Lipopolysaccharide export system permease LptF/LptG A3K93_11640 PF02789 Cytosol aminopeptidase family, N-terminal domain A3K93_11640 PF00883 Cytosol aminopeptidase family, catalytic domain A3K93_11655 PF09335 SNARE associated Golgi protein A3K93_11660 PF00677 Lumazine binding domain A3K93_11670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A3K93_11670 PF01872 RibD C-terminal domain A3K93_11675 PF03477 ATP cone domain A3K93_11680 PF00909 Ammonium Transporter Family A3K93_11685 PF00543 Nitrogen regulatory protein P-II A3K93_11695 PF01078 Magnesium chelatase, subunit ChlI A3K93_11695 PF13335 Magnesium chelatase, subunit ChlI C-terminal A3K93_11705 PF03573 outer membrane porin, OprD family A3K93_11710 PF00719 Inorganic pyrophosphatase A3K93_11725 PF13193 AMP-binding enzyme C-terminal domain A3K93_11725 PF00501 AMP-binding enzyme A3K93_11730 PF00521 DNA gyrase/topoisomerase IV, subunit A A3K93_11730 PF03989 DNA gyrase C-terminal domain, beta-propeller A3K93_11735 PF07690 Major Facilitator Superfamily A3K93_11740 PF03458 UPF0126 domain A3K93_11745 PF02810 SEC-C motif A3K93_11750 PF03741 Integral membrane protein TerC family A3K93_11750 PF03471 Transporter associated domain A3K93_11755 PF03641 Possible lysine decarboxylase A3K93_11765 PF07690 Major Facilitator Superfamily A3K93_11775 PF00817 impB/mucB/samB family A3K93_11775 PF11798 IMS family HHH motif A3K93_11775 PF11799 impB/mucB/samB family C-terminal domain A3K93_11780 PF00083 Sugar (and other) transporter A3K93_11780 PF07690 Major Facilitator Superfamily A3K93_11795 PF08497 Radical SAM N-terminal A3K93_11795 PF04055 Radical SAM superfamily A3K93_11795 PF11842 Domain of unknown function (DUF3362) A3K93_11835 PF01327 Polypeptide deformylase A3K93_11845 PF17782 DprA winged helix domain A3K93_11845 PF02481 DNA recombination-mediator protein A A3K93_11850 PF01300 Telomere recombination A3K93_11855 PF00892 EamA-like transporter family A3K93_11860 PF00255 Glutathione peroxidase A3K93_11880 PF02678 Pirin A3K93_11880 PF05726 Pirin C-terminal cupin domain A3K93_11895 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A3K93_11900 PF02874 ATP synthase alpha/beta family, beta-barrel domain A3K93_11900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A3K93_11905 PF00231 ATP synthase A3K93_11910 PF00306 ATP synthase alpha/beta chain, C terminal domain A3K93_11910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A3K93_11910 PF02874 ATP synthase alpha/beta family, beta-barrel domain A3K93_11915 PF00213 ATP synthase delta (OSCP) subunit A3K93_11920 PF00430 ATP synthase B/B' CF(0) A3K93_11925 PF00137 ATP synthase subunit C A3K93_11930 PF00119 ATP synthase A chain A3K93_11945 PF01475 Ferric uptake regulator family A3K93_11950 PF00005 ABC transporter A3K93_11955 PF00950 ABC 3 transport family A3K93_11960 PF04463 Protein of unknown function (DUF523) A3K93_11965 PF00924 Mechanosensitive ion channel A3K93_11970 PF01810 LysE type translocator A3K93_11975 PF04261 Dyp-type peroxidase family A3K93_11980 PF00155 Aminotransferase class I and II A3K93_11985 PF01554 MatE A3K93_11990 PF00005 ABC transporter A3K93_12000 PF00106 short chain dehydrogenase A3K93_12005 PF08361 MAATS-type transcriptional repressor, C-terminal region A3K93_12005 PF00440 Bacterial regulatory proteins, tetR family A3K93_12010 PF00486 Transcriptional regulatory protein, C terminal A3K93_12010 PF00072 Response regulator receiver domain A3K93_12015 PF00512 His Kinase A (phospho-acceptor) domain A3K93_12015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_12015 PF11808 Phosphate regulon sensor protein PhoR A3K93_12015 PF00989 PAS fold A3K93_12030 PF05726 Pirin C-terminal cupin domain A3K93_12030 PF02678 Pirin A3K93_12035 PF17158 Membrane-associated sensor, integral membrane domain A3K93_12035 PF00990 Diguanylate cyclase, GGDEF domain A3K93_12045 PF13359 DDE superfamily endonuclease A3K93_12045 PF13613 Helix-turn-helix of DDE superfamily endonuclease A3K93_12050 PF13613 Helix-turn-helix of DDE superfamily endonuclease A3K93_12050 PF13359 DDE superfamily endonuclease A3K93_12060 PF00117 Glutamine amidotransferase class-I A3K93_12060 PF02540 NAD synthase A3K93_12060 PF00958 GMP synthase C terminal domain A3K93_12070 PF07681 DoxX A3K93_12075 PF09335 SNARE associated Golgi protein A3K93_12090 PF13614 AAA domain A3K93_12100 PF01722 BolA-like protein A3K93_12120 PF00171 Aldehyde dehydrogenase family A3K93_12125 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A3K93_12125 PF00925 GTP cyclohydrolase II A3K93_12130 PF00885 6,7-dimethyl-8-ribityllumazine synthase A3K93_12135 PF01029 NusB family A3K93_12140 PF00586 AIR synthase related protein, N-terminal domain A3K93_12140 PF02769 AIR synthase related protein, C-terminal domain A3K93_12145 PF04608 Phosphatidylglycerophosphatase A A3K93_12150 PF00132 Bacterial transferase hexapeptide (six repeats) A3K93_12150 PF12804 MobA-like NTP transferase domain A3K93_12150 PF14602 Hexapeptide repeat of succinyl-transferase A3K93_12155 PF01380 SIS domain A3K93_12160 PF08722 TnsA endonuclease N terminal A3K93_12160 PF08721 TnsA endonuclease C terminal A3K93_12165 PF00665 Integrase core domain A3K93_12170 PF11426 Tn7 transposition regulator TnsC A3K93_12170 PF13401 AAA domain A3K93_12175 PF15978 Tn7-like transposition protein D A3K93_12175 PF06527 TniQ A3K93_12180 PF18623 TnsE C-terminal domain A3K93_12185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A3K93_12185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A3K93_12185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A3K93_12185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A3K93_12190 PF16363 GDP-mannose 4,6 dehydratase A3K93_12195 PF00342 Phosphoglucose isomerase A3K93_12200 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A3K93_12200 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A3K93_12200 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A3K93_12205 PF00483 Nucleotidyl transferase A3K93_12210 PF02397 Bacterial sugar transferase A3K93_12220 PF00535 Glycosyl transferase family 2 A3K93_12230 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase A3K93_12235 PF00483 Nucleotidyl transferase A3K93_12240 PF04321 RmlD substrate binding domain A3K93_12245 PF16363 GDP-mannose 4,6 dehydratase A3K93_12255 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase A3K93_12255 PF00535 Glycosyl transferase family 2 A3K93_12275 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A3K93_12275 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A3K93_12275 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A3K93_12280 PF13737 Transposase DDE domain A3K93_12285 PF13613 Helix-turn-helix of DDE superfamily endonuclease A3K93_12285 PF13359 DDE superfamily endonuclease A3K93_12295 PF13007 Transposase C of IS166 homeodomain A3K93_12295 PF13817 IS66 C-terminal element A3K93_12295 PF03050 Transposase IS66 family A3K93_12295 PF13005 zinc-finger binding domain of transposase IS66 A3K93_12310 PF02719 Polysaccharide biosynthesis protein A3K93_12315 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A3K93_12320 PF17836 PglD N-terminal domain A3K93_12320 PF14602 Hexapeptide repeat of succinyl-transferase A3K93_12320 PF00132 Bacterial transferase hexapeptide (six repeats) A3K93_12325 PF02397 Bacterial sugar transferase A3K93_12330 PF00534 Glycosyl transferases group 1 A3K93_12330 PF13477 Glycosyl transferase 4-like A3K93_12335 PF00534 Glycosyl transferases group 1 A3K93_12335 PF13439 Glycosyltransferase Family 4 A3K93_12340 PF13439 Glycosyltransferase Family 4 A3K93_12340 PF00534 Glycosyl transferases group 1 A3K93_12345 PF00132 Bacterial transferase hexapeptide (six repeats) A3K93_12360 PF01370 NAD dependent epimerase/dehydratase family A3K93_12365 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A3K93_12365 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A3K93_12365 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A3K93_12370 PF10531 SLBB domain A3K93_12370 PF02563 Polysaccharide biosynthesis/export protein A3K93_12370 PF18412 Outer-membrane lipoprotein Wza C-terminal domain A3K93_12375 PF01451 Low molecular weight phosphotyrosine protein phosphatase A3K93_12380 PF02706 Chain length determinant protein A3K93_12380 PF13807 G-rich domain on putative tyrosine kinase A3K93_12380 PF13614 AAA domain A3K93_12385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A3K93_12385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A3K93_12390 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A3K93_12390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A3K93_12405 PF00730 HhH-GPD superfamily base excision DNA repair protein A3K93_12405 PF14815 NUDIX domain A3K93_12405 PF00633 Helix-hairpin-helix motif A3K93_12410 PF01551 Peptidase family M23 A3K93_12420 PF03352 Methyladenine glycosylase A3K93_12425 PF00107 Zinc-binding dehydrogenase A3K93_12425 PF08240 Alcohol dehydrogenase GroES-like domain A3K93_12430 PF00392 Bacterial regulatory proteins, gntR family A3K93_12445 PF05173 Dihydrodipicolinate reductase, C-terminus A3K93_12445 PF01113 Dihydrodipicolinate reductase, N-terminus A3K93_12450 PF01556 DnaJ C terminal domain A3K93_12450 PF00684 DnaJ central domain A3K93_12450 PF00226 DnaJ domain A3K93_12460 PF00873 AcrB/AcrD/AcrF family A3K93_12470 PF00440 Bacterial regulatory proteins, tetR family A3K93_12475 PF00311 Phosphoenolpyruvate carboxylase A3K93_12480 PF00860 Permease family A3K93_12485 PF03466 LysR substrate binding domain A3K93_12485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_12505 PF00920 Dehydratase family A3K93_12515 PF00920 Dehydratase family A3K93_12520 PF00551 Formyl transferase A3K93_12520 PF02911 Formyl transferase, C-terminal domain A3K93_12525 PF01029 NusB family A3K93_12525 PF01189 16S rRNA methyltransferase RsmB/F A3K93_12530 PF00209 Sodium:neurotransmitter symporter family A3K93_12535 PF01965 DJ-1/PfpI family A3K93_12550 PF07690 Major Facilitator Superfamily A3K93_12580 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A3K93_12590 PF07859 alpha/beta hydrolase fold A3K93_12600 PF01025 GrpE A3K93_12605 PF00012 Hsp70 protein A3K93_12625 PF01521 Iron-sulphur cluster biosynthesis A3K93_12645 PF12848 ABC transporter A3K93_12645 PF00005 ABC transporter A3K93_12650 PF08240 Alcohol dehydrogenase GroES-like domain A3K93_12650 PF13823 Alcohol dehydrogenase GroES-associated A3K93_12650 PF00107 Zinc-binding dehydrogenase A3K93_12660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_12660 PF00986 DNA gyrase B subunit, carboxyl terminus A3K93_12660 PF00204 DNA gyrase B A3K93_12660 PF18053 DNA gyrase B subunit insert domain A3K93_12660 PF01751 Toprim domain A3K93_12665 PF02463 RecF/RecN/SMC N terminal domain A3K93_12670 PF00712 DNA polymerase III beta subunit, N-terminal domain A3K93_12670 PF02767 DNA polymerase III beta subunit, central domain A3K93_12670 PF02768 DNA polymerase III beta subunit, C-terminal domain A3K93_12675 PF00308 Bacterial dnaA protein A3K93_12675 PF08299 Bacterial dnaA protein helix-turn-helix A3K93_12675 PF11638 DnaA N-terminal domain A3K93_12680 PF00468 Ribosomal protein L34 A3K93_12685 PF00825 Ribonuclease P A3K93_12690 PF01809 Putative membrane protein insertion efficiency factor A3K93_12695 PF02096 60Kd inner membrane protein A3K93_12695 PF14849 YidC periplasmic domain A3K93_12700 PF10396 GTP-binding protein TrmE N-terminus A3K93_12700 PF12631 MnmE helical domain A3K93_12700 PF01926 50S ribosome-binding GTPase A3K93_12720 PF00156 Phosphoribosyl transferase domain A3K93_12725 PF01979 Amidohydrolase family A3K93_12730 PF03741 Integral membrane protein TerC family A3K93_12735 PF07690 Major Facilitator Superfamily A3K93_12740 PF14542 GCN5-related N-acetyl-transferase A3K93_12750 PF01225 Mur ligase family, catalytic domain A3K93_12750 PF02875 Mur ligase family, glutamate ligase domain A3K93_12750 PF08245 Mur ligase middle domain A3K93_12770 PF01385 Probable transposase A3K93_12770 PF12323 Helix-turn-helix domain A3K93_12770 PF07282 Putative transposase DNA-binding domain A3K93_12780 PF00731 AIR carboxylase A3K93_12785 PF02222 ATP-grasp domain A3K93_12785 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain A3K93_12795 PF13406 Transglycosylase SLT domain A3K93_12800 PF03702 Anhydro-N-acetylmuramic acid kinase A3K93_12805 PF00579 tRNA synthetases class I (W and Y) A3K93_12845 PF01590 GAF domain A3K93_12845 PF00360 Phytochrome region A3K93_12845 PF00563 EAL domain A3K93_12845 PF00990 Diguanylate cyclase, GGDEF domain A3K93_12850 PF07995 Glucose / Sorbosone dehydrogenase A3K93_12860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A3K93_12865 PF01252 Signal peptidase (SPase) II A3K93_12870 PF08264 Anticodon-binding domain of tRNA A3K93_12870 PF00133 tRNA synthetases class I (I, L, M and V) A3K93_12870 PF06827 Zinc finger found in FPG and IleRS A3K93_12875 PF06574 FAD synthetase A3K93_12875 PF01687 Riboflavin kinase A3K93_12885 PF08362 YcdC-like protein, C-terminal region A3K93_12885 PF00440 Bacterial regulatory proteins, tetR family A3K93_12895 PF00005 ABC transporter A3K93_12900 PF00528 Binding-protein-dependent transport system inner membrane component A3K93_12905 PF00296 Luciferase-like monooxygenase A3K93_12910 PF09084 NMT1/THI5 like A3K93_12915 PF09084 NMT1/THI5 like A3K93_12920 PF00583 Acetyltransferase (GNAT) family A3K93_12920 PF00696 Amino acid kinase family A3K93_12940 PF00106 short chain dehydrogenase A3K93_12945 PF13419 Haloacid dehalogenase-like hydrolase A3K93_12955 PF01323 DSBA-like thioredoxin domain A3K93_12965 PF01138 3' exoribonuclease family, domain 1 A3K93_12965 PF03725 3' exoribonuclease family, domain 2 A3K93_12970 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A3K93_12970 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A3K93_12975 PF01510 N-acetylmuramoyl-L-alanine amidase A3K93_12980 PF03023 Lipid II flippase MurJ A3K93_12985 PF03692 Putative zinc- or iron-chelating domain A3K93_12990 PF00563 EAL domain A3K93_12990 PF13185 GAF domain A3K93_12990 PF00990 Diguanylate cyclase, GGDEF domain A3K93_12995 PF00004 ATPase family associated with various cellular activities (AAA) A3K93_12995 PF16193 AAA C-terminal domain A3K93_12995 PF12002 MgsA AAA+ ATPase C terminal A3K93_13000 PF01259 SAICAR synthetase A3K93_13010 PF00701 Dihydrodipicolinate synthetase family A3K93_13015 PF07690 Major Facilitator Superfamily A3K93_13020 PF00857 Isochorismatase family A3K93_13025 PF01758 Sodium Bile acid symporter family A3K93_13055 PF02580 D-Tyr-tRNA(Tyr) deacylase A3K93_13060 PF06628 Catalase-related immune-responsive A3K93_13060 PF00199 Catalase A3K93_13075 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain A3K93_13075 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family A3K93_13080 PF00581 Rhodanese-like domain A3K93_13085 PF02666 Phosphatidylserine decarboxylase A3K93_13095 PF05746 DALR anticodon binding domain A3K93_13095 PF03485 Arginyl tRNA synthetase N terminal domain A3K93_13095 PF00750 tRNA synthetases class I (R) A3K93_13105 PF04286 Protein of unknown function (DUF445) A3K93_13120 PF04262 Glutamate-cysteine ligase A3K93_13125 PF02600 Disulfide bond formation protein DsbB A3K93_13130 PF01609 Transposase DDE domain A3K93_13130 PF13006 Insertion element 4 transposase N-terminal A3K93_13140 PF05728 Uncharacterised protein family (UPF0227) A3K93_13145 PF00204 DNA gyrase B A3K93_13145 PF00986 DNA gyrase B subunit, carboxyl terminus A3K93_13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_13145 PF01751 Toprim domain A3K93_13155 PF03069 Acetamidase/Formamidase family A3K93_13160 PF10431 C-terminal, D2-small domain, of ClpB protein A3K93_13160 PF07724 AAA domain (Cdc48 subfamily) A3K93_13165 PF00795 Carbon-nitrogen hydrolase A3K93_13170 PF00005 ABC transporter A3K93_13175 PF12399 Branched-chain amino acid ATP-binding cassette transporter A3K93_13175 PF00005 ABC transporter A3K93_13195 PF01179 Copper amine oxidase, enzyme domain A3K93_13195 PF07833 Copper amine oxidase N-terminal domain A3K93_13195 PF02728 Copper amine oxidase, N3 domain A3K93_13195 PF02727 Copper amine oxidase, N2 domain A3K93_13210 PF02803 Thiolase, C-terminal domain A3K93_13210 PF00108 Thiolase, N-terminal domain A3K93_13215 PF01144 Coenzyme A transferase A3K93_13220 PF01144 Coenzyme A transferase A3K93_13230 PF14497 Glutathione S-transferase, C-terminal domain A3K93_13230 PF02798 Glutathione S-transferase, N-terminal domain A3K93_13245 PF01494 FAD binding domain A3K93_13260 PF00528 Binding-protein-dependent transport system inner membrane component A3K93_13265 PF00005 ABC transporter A3K93_13270 PF13545 Crp-like helix-turn-helix domain A3K93_13270 PF00027 Cyclic nucleotide-binding domain A3K93_13280 PF07715 TonB-dependent Receptor Plug Domain A3K93_13280 PF00593 TonB dependent receptor A3K93_13290 PF00248 Aldo/keto reductase family A3K93_13305 PF00589 Phage integrase family A3K93_13305 PF02899 Phage integrase, N-terminal SAM-like domain A3K93_13310 PF08241 Methyltransferase domain A3K93_13330 PF18273 Type III R-M EcoP15I C-terminal domain A3K93_13330 PF01555 DNA methylase A3K93_13335 PF04851 Type III restriction enzyme, res subunit A3K93_13335 PF08774 VRR-NUC domain A3K93_13340 PF12102 Domain of unknown function (DUF3578) A3K93_13340 PF07728 AAA domain (dynein-related subfamily) A3K93_13360 PF02668 Taurine catabolism dioxygenase TauD, TfdA family A3K93_13365 PF01695 IstB-like ATP binding protein A3K93_13370 PF08281 Sigma-70, region 4 A3K93_13370 PF00665 Integrase core domain A3K93_13385 PF01381 Helix-turn-helix A3K93_13400 PF13333 Integrase core domain A3K93_13400 PF13276 HTH-like domain A3K93_13400 PF00665 Integrase core domain A3K93_13405 PF01527 Transposase A3K93_13415 PF00005 ABC transporter A3K93_13415 PF00664 ABC transporter transmembrane region A3K93_13435 PF00005 ABC transporter A3K93_13435 PF08402 TOBE domain A3K93_13445 PF07715 TonB-dependent Receptor Plug Domain A3K93_13445 PF00593 TonB dependent receptor A3K93_13450 PF03544 Gram-negative bacterial TonB protein C-terminal A3K93_13455 PF01618 MotA/TolQ/ExbB proton channel family A3K93_13460 PF02472 Biopolymer transport protein ExbD/TolR A3K93_13475 PF01385 Probable transposase A3K93_13475 PF07282 Putative transposase DNA-binding domain A3K93_13475 PF12323 Helix-turn-helix domain A3K93_13480 PF12146 Serine aminopeptidase, S33 A3K93_13485 PF08359 YsiA-like protein, C-terminal region A3K93_13485 PF00440 Bacterial regulatory proteins, tetR family A3K93_13495 PF08267 Cobalamin-independent synthase, N-terminal domain A3K93_13495 PF01717 Cobalamin-independent synthase, Catalytic domain A3K93_13500 PF01613 Flavin reductase like domain A3K93_13505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_13505 PF03466 LysR substrate binding domain A3K93_13520 PF00873 AcrB/AcrD/AcrF family A3K93_13535 PF13005 zinc-finger binding domain of transposase IS66 A3K93_13535 PF13817 IS66 C-terminal element A3K93_13535 PF03050 Transposase IS66 family A3K93_13535 PF13007 Transposase C of IS166 homeodomain A3K93_13540 PF00324 Amino acid permease A3K93_13550 PF01654 Cytochrome bd terminal oxidase subunit I A3K93_13555 PF02322 Cytochrome bd terminal oxidase subunit II A3K93_13575 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin A3K93_13580 PF01177 Asp/Glu/Hydantoin racemase A3K93_13595 PF12323 Helix-turn-helix domain A3K93_13595 PF01385 Probable transposase A3K93_13595 PF07282 Putative transposase DNA-binding domain A3K93_13605 PF00576 HIUase/Transthyretin family A3K93_13620 PF01385 Probable transposase A3K93_13620 PF12323 Helix-turn-helix domain A3K93_13620 PF07282 Putative transposase DNA-binding domain A3K93_13625 PF00860 Permease family A3K93_13635 PF04115 Ureidoglycolate lyase A3K93_13640 PF03561 Allantoicase repeat A3K93_13645 PF01494 FAD binding domain A3K93_13650 PF00355 Rieske [2Fe-2S] domain A3K93_13655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_13655 PF03466 LysR substrate binding domain A3K93_13660 PF00355 Rieske [2Fe-2S] domain A3K93_13670 PF02608 ABC transporter substrate-binding protein PnrA-like A3K93_13690 PF01979 Amidohydrolase family A3K93_13700 PF00392 Bacterial regulatory proteins, gntR family A3K93_13700 PF07729 FCD domain A3K93_13705 PF07715 TonB-dependent Receptor Plug Domain A3K93_13705 PF00593 TonB dependent receptor A3K93_13720 PF00005 ABC transporter A3K93_13765 PF04143 Sulphur transport A3K93_13775 PF00753 Metallo-beta-lactamase superfamily A3K93_13785 PF13737 Transposase DDE domain A3K93_13795 PF03050 Transposase IS66 family A3K93_13795 PF13817 IS66 C-terminal element A3K93_13795 PF13007 Transposase C of IS166 homeodomain A3K93_13795 PF13005 zinc-finger binding domain of transposase IS66 A3K93_13825 PF01545 Cation efflux family A3K93_13830 PF13737 Transposase DDE domain A3K93_13835 PF04221 RelB antitoxin A3K93_13840 PF03960 ArsC family A3K93_13845 PF01022 Bacterial regulatory protein, arsR family A3K93_13850 PF01758 Sodium Bile acid symporter family A3K93_13855 PF03358 NADPH-dependent FMN reductase A3K93_13865 PF04221 RelB antitoxin A3K93_13870 PF05163 DinB family A3K93_13890 PF00313 'Cold-shock' DNA-binding domain A3K93_13905 PF01381 Helix-turn-helix A3K93_13920 PF04221 RelB antitoxin A3K93_13930 PF01381 Helix-turn-helix A3K93_13935 PF05973 Phage derived protein Gp49-like (DUF891) A3K93_13945 PF02028 BCCT, betaine/carnitine/choline family transporter A3K93_13950 PF13737 Transposase DDE domain A3K93_13965 PF00155 Aminotransferase class I and II A3K93_13965 PF00392 Bacterial regulatory proteins, gntR family A3K93_13975 PF00732 GMC oxidoreductase A3K93_13975 PF05199 GMC oxidoreductase A3K93_13980 PF00171 Aldehyde dehydrogenase family A3K93_13985 PF00440 Bacterial regulatory proteins, tetR family A3K93_13985 PF13977 BetI-type transcriptional repressor, C-terminal A3K93_13990 PF02028 BCCT, betaine/carnitine/choline family transporter A3K93_14010 PF07715 TonB-dependent Receptor Plug Domain A3K93_14010 PF00593 TonB dependent receptor A3K93_14025 PF12323 Helix-turn-helix domain A3K93_14025 PF07282 Putative transposase DNA-binding domain A3K93_14025 PF01385 Probable transposase A3K93_14035 PF00528 Binding-protein-dependent transport system inner membrane component A3K93_14040 PF00005 ABC transporter A3K93_14055 PF00893 Small Multidrug Resistance protein A3K93_14065 PF01425 Amidase A3K93_14070 PF01402 Ribbon-helix-helix protein, copG family A3K93_14070 PF08753 NikR C terminal nickel binding domain A3K93_14075 PF05016 ParE toxin of type II toxin-antitoxin system, parDE A3K93_14090 PF02785 Biotin carboxylase C-terminal domain A3K93_14090 PF00289 Biotin carboxylase, N-terminal domain A3K93_14090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A3K93_14105 PF13613 Helix-turn-helix of DDE superfamily endonuclease A3K93_14105 PF13359 DDE superfamily endonuclease A3K93_14110 PF13613 Helix-turn-helix of DDE superfamily endonuclease A3K93_14110 PF13359 DDE superfamily endonuclease A3K93_14120 PF13614 AAA domain A3K93_14125 PF02195 ParB-like nuclease domain A3K93_14125 PF17762 HTH domain found in ParB protein A3K93_14130 PF00313 'Cold-shock' DNA-binding domain A3K93_14150 PF12146 Serine aminopeptidase, S33 A3K93_14155 PF02803 Thiolase, C-terminal domain A3K93_14155 PF00108 Thiolase, N-terminal domain A3K93_14160 PF01144 Coenzyme A transferase A3K93_14165 PF01144 Coenzyme A transferase A3K93_14170 PF00775 Dioxygenase A3K93_14170 PF04444 Catechol dioxygenase N terminus A3K93_14175 PF02426 Muconolactone delta-isomerase A3K93_14180 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A3K93_14180 PF13378 Enolase C-terminal domain-like A3K93_14185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A3K93_14185 PF03466 LysR substrate binding domain A3K93_14195 PF01425 Amidase A3K93_14200 PF08028 Acyl-CoA dehydrogenase, C-terminal domain A3K93_14215 PF00355 Rieske [2Fe-2S] domain A3K93_14215 PF00848 Ring hydroxylating alpha subunit (catalytic domain) A3K93_14230 PF00111 2Fe-2S iron-sulfur cluster binding domain A3K93_14230 PF00175 Oxidoreductase NAD-binding domain A3K93_14235 PF01613 Flavin reductase like domain A3K93_14240 PF03573 outer membrane porin, OprD family A3K93_14255 PF12399 Branched-chain amino acid ATP-binding cassette transporter A3K93_14255 PF00005 ABC transporter A3K93_14260 PF00005 ABC transporter A3K93_14265 PF08546 Ketopantoate reductase PanE/ApbA C terminal A3K93_14265 PF02558 Ketopantoate reductase PanE/ApbA A3K93_14270 PF00596 Class II Aldolase and Adducin N-terminal domain A3K93_14280 PF12833 Helix-turn-helix domain A3K93_14285 PF05199 GMC oxidoreductase A3K93_14285 PF00732 GMC oxidoreductase A3K93_14290 PF00171 Aldehyde dehydrogenase family A3K93_14295 PF08669 Glycine cleavage T-protein C-terminal barrel domain A3K93_14295 PF01571 Aminomethyltransferase folate-binding domain A3K93_14300 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term A3K93_14300 PF07730 Histidine kinase A3K93_14300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3K93_14300 PF00672 HAMP domain A3K93_14305 PF00196 Bacterial regulatory proteins, luxR family A3K93_14305 PF00072 Response regulator receiver domain A3K93_14325 PF00111 2Fe-2S iron-sulfur cluster binding domain A3K93_14325 PF00970 Oxidoreductase FAD-binding domain A3K93_14325 PF00175 Oxidoreductase NAD-binding domain A3K93_14335 PF08669 Glycine cleavage T-protein C-terminal barrel domain A3K93_14335 PF01571 Aminomethyltransferase folate-binding domain A3K93_14340 PF00543 Nitrogen regulatory protein P-II A3K93_14345 PF00551 Formyl transferase A3K93_14350 PF00893 Small Multidrug Resistance protein A3K93_14360 PF00551 Formyl transferase A3K93_14365 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A3K93_14365 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A3K93_14370 PF01266 FAD dependent oxidoreductase A3K93_14375 PF04267 Sarcosine oxidase, delta subunit family A3K93_14380 PF17806 Sarcosine oxidase A3 domain A3K93_14380 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_14380 PF01571 Aminomethyltransferase folate-binding domain A3K93_14380 PF08669 Glycine cleavage T-protein C-terminal barrel domain A3K93_14390 PF00665 Integrase core domain A3K93_14390 PF13936 Helix-turn-helix domain A3K93_14395 PF00909 Ammonium Transporter Family A3K93_14400 PF01381 Helix-turn-helix A3K93_14405 PF00120 Glutamine synthetase, catalytic domain A3K93_14415 PF01493 GXGXG motif A3K93_14420 PF01645 Conserved region in glutamate synthase A3K93_14430 PF02814 UreE urease accessory protein, N-terminal domain A3K93_14435 PF01730 UreF A3K93_14440 PF00547 Urease, gamma subunit A3K93_14440 PF00699 Urease beta subunit A3K93_14445 PF00449 Urease alpha-subunit, N-terminal domain A3K93_14445 PF01979 Amidohydrolase family A3K93_14450 PF02492 CobW/HypB/UreG, nucleotide-binding domain A3K93_14455 PF01774 UreD urease accessory protein A3K93_14460 PF00005 ABC transporter A3K93_14470 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A3K93_14470 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A3K93_14470 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_14470 PF18267 Rubredoxin NAD+ reductase C-terminal domain A3K93_14470 PF04324 BFD-like [2Fe-2S] binding domain A3K93_14475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A3K93_14475 PF04324 BFD-like [2Fe-2S] binding domain A3K93_14475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A3K93_14475 PF18267 Rubredoxin NAD+ reductase C-terminal domain A3K93_14475 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3K93_14480 PF02560 Cyanate lyase C-terminal domain A3K93_14485 PF13737 Transposase DDE domain A3K93_14495 PF01226 Formate/nitrite transporter A3K93_14500 PF00069 Protein kinase domain A3K93_14505 PF14659 Phage integrase, N-terminal SAM-like domain A3K93_14505 PF13356 Arm DNA-binding domain A3K93_14505 PF00589 Phage integrase family A3K93_14525 PF01266 FAD dependent oxidoreductase A3K93_14530 PF00196 Bacterial regulatory proteins, luxR family A3K93_14530 PF00072 Response regulator receiver domain A3K93_14550 PF00067 Cytochrome P450 A3K93_14555 PF00083 Sugar (and other) transporter A3K93_14555 PF07690 Major Facilitator Superfamily A3K93_14565 PF07282 Putative transposase DNA-binding domain A3K93_14565 PF01385 Probable transposase A3K93_14565 PF12323 Helix-turn-helix domain A3K93_14570 PF00171 Aldehyde dehydrogenase family