locus-tag class description C3Y93_00005 PF01594 AI-2E family transporter C3Y93_00010 PF11638 DnaA N-terminal domain C3Y93_00010 PF08299 Bacterial dnaA protein helix-turn-helix C3Y93_00010 PF00308 Bacterial dnaA protein C3Y93_00040 PF00588 SpoU rRNA Methylase family C3Y93_00040 PF08032 RNA 2'-O ribose methyltransferase substrate binding C3Y93_00045 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C3Y93_00055 PF00691 OmpA family C3Y93_00060 PF04052 TolB amino-terminal domain C3Y93_00060 PF07676 WD40-like Beta Propeller Repeat C3Y93_00070 PF02472 Biopolymer transport protein ExbD/TolR C3Y93_00075 PF01618 MotA/TolQ/ExbB proton channel family C3Y93_00080 PF03061 Thioesterase superfamily C3Y93_00090 PF05496 Holliday junction DNA helicase RuvB P-loop domain C3Y93_00090 PF17864 RuvB AAA lid domain C3Y93_00090 PF05491 RuvB C-terminal winged helix domain C3Y93_00095 PF01330 RuvA N terminal domain C3Y93_00095 PF07499 RuvA, C-terminal domain C3Y93_00100 PF01966 HD domain C3Y93_00105 PF01784 NIF3 (NGG1p interacting factor 3) C3Y93_00115 PF00378 Enoyl-CoA hydratase/isomerase C3Y93_00120 PF00293 NUDIX domain C3Y93_00120 PF01467 Cytidylyltransferase-like C3Y93_00125 PF00578 AhpC/TSA family C3Y93_00135 PF06508 Queuosine biosynthesis protein QueC C3Y93_00145 PF14602 Hexapeptide repeat of succinyl-transferase C3Y93_00145 PF00132 Bacterial transferase hexapeptide (six repeats) C3Y93_00145 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C3Y93_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_00160 PF03466 LysR substrate binding domain C3Y93_00165 PF12857 TOBE-like domain C3Y93_00165 PF00005 ABC transporter C3Y93_00170 PF00528 Binding-protein-dependent transport system inner membrane component C3Y93_00175 PF00528 Binding-protein-dependent transport system inner membrane component C3Y93_00195 PF02618 YceG-like family C3Y93_00200 PF02223 Thymidylate kinase C3Y93_00210 PF13419 Haloacid dehalogenase-like hydrolase C3Y93_00215 PF02910 Fumarate reductase flavoprotein C-term C3Y93_00215 PF00890 FAD binding domain C3Y93_00220 PF13180 PDZ domain C3Y93_00230 PF06421 GTP-binding protein LepA C-terminus C3Y93_00230 PF03144 Elongation factor Tu domain 2 C3Y93_00230 PF00009 Elongation factor Tu GTP binding domain C3Y93_00230 PF00679 Elongation factor G C-terminus C3Y93_00235 PF10502 Signal peptidase, peptidase S26 C3Y93_00245 PF00035 Double-stranded RNA binding motif C3Y93_00245 PF14622 Ribonuclease-III-like C3Y93_00250 PF07650 KH domain C3Y93_00250 PF01926 50S ribosome-binding GTPase C3Y93_00260 PF11967 Recombination protein O N terminal C3Y93_00260 PF02565 Recombination protein O C terminal C3Y93_00265 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C3Y93_00270 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C3Y93_00285 PF00892 EamA-like transporter family C3Y93_00305 PF00271 Helicase conserved C-terminal domain C3Y93_00305 PF04851 Type III restriction enzyme, res subunit C3Y93_00305 PF02151 UvrB/uvrC motif C3Y93_00305 PF12344 Ultra-violet resistance protein B C3Y93_00305 PF17757 UvrB interaction domain C3Y93_00315 PF00892 EamA-like transporter family C3Y93_00320 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3Y93_00320 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C3Y93_00325 PF01638 HxlR-like helix-turn-helix C3Y93_00330 PF07690 Major Facilitator Superfamily C3Y93_00335 PF01018 GTP1/OBG C3Y93_00335 PF01926 50S ribosome-binding GTPase C3Y93_00340 PF01472 PUA domain C3Y93_00340 PF00696 Amino acid kinase family C3Y93_00355 PF00202 Aminotransferase class-III C3Y93_00360 PF00282 Pyridoxal-dependent decarboxylase conserved domain C3Y93_00370 PF00528 Binding-protein-dependent transport system inner membrane component C3Y93_00375 PF00528 Binding-protein-dependent transport system inner membrane component C3Y93_00380 PF00005 ABC transporter C3Y93_00390 PF01343 Peptidase family S49 C3Y93_00390 PF08496 Peptidase family S49 N-terminal C3Y93_00405 PF08328 Adenylosuccinate lyase C-terminal C3Y93_00405 PF00206 Lyase C3Y93_00410 PF04356 Protein of unknown function (DUF489) C3Y93_00420 PF00293 NUDIX domain C3Y93_00430 PF00132 Bacterial transferase hexapeptide (six repeats) C3Y93_00435 PF07943 Penicillin-binding protein 5, C-terminal domain C3Y93_00435 PF00768 D-alanyl-D-alanine carboxypeptidase C3Y93_00450 PF01975 Survival protein SurE C3Y93_00455 PF01551 Peptidase family M23 C3Y93_00455 PF01476 LysM domain C3Y93_00460 PF03466 LysR substrate binding domain C3Y93_00460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_00465 PF00202 Aminotransferase class-III C3Y93_00470 PF00462 Glutaredoxin C3Y93_00475 PF05362 Lon protease (S16) C-terminal proteolytic domain C3Y93_00475 PF13654 AAA domain C3Y93_00480 PF07690 Major Facilitator Superfamily C3Y93_00485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3Y93_00490 PF13593 SBF-like CPA transporter family (DUF4137) C3Y93_00495 PF01197 Ribosomal protein L31 C3Y93_00510 PF04055 Radical SAM superfamily C3Y93_00515 PF08207 Elongation factor P (EF-P) KOW-like domain C3Y93_00515 PF09285 Elongation factor P, C-terminal C3Y93_00515 PF01132 Elongation factor P (EF-P) OB domain C3Y93_00520 PF13722 5TM C-terminal transporter carbon starvation CstA C3Y93_00520 PF02554 Carbon starvation protein CstA C3Y93_00525 PF04328 Selenoprotein, putative C3Y93_00530 PF07726 ATPase family associated with various cellular activities (AAA) C3Y93_00530 PF17863 AAA lid domain C3Y93_00540 PF01841 Transglutaminase-like superfamily C3Y93_00540 PF13559 Domain of unknown function (DUF4129) C3Y93_00540 PF11992 Domain of unknown function (DUF3488) C3Y93_00560 PF00860 Permease family C3Y93_00565 PF00962 Adenosine/AMP deaminase C3Y93_00580 PF01351 Ribonuclease HII C3Y93_00585 PF02599 Global regulator protein family C3Y93_00590 PF13840 ACT domain C3Y93_00590 PF01842 ACT domain C3Y93_00590 PF00696 Amino acid kinase family C3Y93_00595 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3Y93_00595 PF01411 tRNA synthetases class II (A) C3Y93_00595 PF02272 DHHA1 domain C3Y93_00600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C3Y93_00600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3Y93_00610 PF13393 Histidyl-tRNA synthetase C3Y93_00615 PF00709 Adenylosuccinate synthetase C3Y93_00630 PF00248 Aldo/keto reductase family C3Y93_00635 PF13545 Crp-like helix-turn-helix domain C3Y93_00635 PF00027 Cyclic nucleotide-binding domain C3Y93_00640 PF02566 OsmC-like protein C3Y93_00645 PF00004 ATPase family associated with various cellular activities (AAA) C3Y93_00645 PF07724 AAA domain (Cdc48 subfamily) C3Y93_00645 PF17871 AAA lid domain C3Y93_00645 PF02861 Clp amino terminal domain, pathogenicity island component C3Y93_00645 PF10431 C-terminal, D2-small domain, of ClpB protein C3Y93_00655 PF02926 THUMP domain C3Y93_00655 PF01170 Putative RNA methylase family UPF0020 C3Y93_00655 PF10672 S-adenosylmethionine-dependent methyltransferase C3Y93_00665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3Y93_00665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3Y93_00670 PF01979 Amidohydrolase family C3Y93_00685 PF00691 OmpA family C3Y93_00685 PF01389 OmpA-like transmembrane domain C3Y93_00690 PF01144 Coenzyme A transferase C3Y93_00695 PF01144 Coenzyme A transferase C3Y93_00700 PF00682 HMGL-like C3Y93_00705 PF00289 Biotin carboxylase, N-terminal domain C3Y93_00705 PF00364 Biotin-requiring enzyme C3Y93_00705 PF02785 Biotin carboxylase C-terminal domain C3Y93_00705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3Y93_00710 PF00378 Enoyl-CoA hydratase/isomerase C3Y93_00715 PF01039 Carboxyl transferase domain C3Y93_00720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3Y93_00720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3Y93_00720 PF02770 Acyl-CoA dehydrogenase, middle domain C3Y93_00725 PF17925 Tetracyclin repressor-like, C-terminal domain C3Y93_00725 PF00440 Bacterial regulatory proteins, tetR family C3Y93_00730 PF00501 AMP-binding enzyme C3Y93_00730 PF13193 AMP-binding enzyme C-terminal domain C3Y93_00735 PF04055 Radical SAM superfamily C3Y93_00735 PF06968 Biotin and Thiamin Synthesis associated domain C3Y93_00755 PF02390 Putative methyltransferase C3Y93_00760 PF00916 Sulfate permease family C3Y93_00760 PF01740 STAS domain C3Y93_00765 PF00043 Glutathione S-transferase, C-terminal domain C3Y93_00765 PF02798 Glutathione S-transferase, N-terminal domain C3Y93_00770 PF05690 Thiazole biosynthesis protein ThiG C3Y93_00780 PF04241 Protein of unknown function (DUF423) C3Y93_00785 PF04542 Sigma-70 region 2 C3Y93_00785 PF00140 Sigma-70 factor, region 1.2 C3Y93_00785 PF04545 Sigma-70, region 4 C3Y93_00795 PF00313 'Cold-shock' DNA-binding domain C3Y93_00800 PF00270 DEAD/DEAH box helicase C3Y93_00800 PF00271 Helicase conserved C-terminal domain C3Y93_00815 PF00881 Nitroreductase family C3Y93_00820 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C3Y93_00820 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C3Y93_00840 PF01180 Dihydroorotate dehydrogenase C3Y93_00845 PF02674 Colicin V production protein C3Y93_00850 PF00156 Phosphoribosyl transferase domain C3Y93_00865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3Y93_00865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3Y93_00870 PF01435 Peptidase family M48 C3Y93_00885 PF09424 Yqey-like protein C3Y93_00890 PF01165 Ribosomal protein S21 C3Y93_00895 PF00814 Glycoprotease family C3Y93_00920 PF03793 PASTA domain C3Y93_00920 PF00069 Protein kinase domain C3Y93_00950 PF16123 Hydroxyacylglutathione hydrolase C-terminus C3Y93_00950 PF00753 Metallo-beta-lactamase superfamily C3Y93_00955 PF00155 Aminotransferase class I and II C3Y93_00960 PF01641 SelR domain C3Y93_00965 PF00255 Glutathione peroxidase C3Y93_00970 PF00155 Aminotransferase class I and II C3Y93_00975 PF01966 HD domain C3Y93_00975 PF08335 GlnD PII-uridylyltransferase C3Y93_00975 PF01909 Nucleotidyltransferase domain C3Y93_00980 PF02222 ATP-grasp domain C3Y93_00985 PF05437 Branched-chain amino acid transport protein (AzlD) C3Y93_00990 PF03591 AzlC protein C3Y93_01000 PF01926 50S ribosome-binding GTPase C3Y93_01000 PF06071 Protein of unknown function (DUF933) C3Y93_01020 PF01709 Transcriptional regulator C3Y93_01035 PF00589 Phage integrase family C3Y93_01035 PF13356 Arm DNA-binding domain C3Y93_01070 PF13340 Putative transposase of IS4/5 family (DUF4096) C3Y93_01080 PF12833 Helix-turn-helix domain C3Y93_01080 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C3Y93_01085 PF00171 Aldehyde dehydrogenase family C3Y93_01090 PF05199 GMC oxidoreductase C3Y93_01095 PF13340 Putative transposase of IS4/5 family (DUF4096) C3Y93_01145 PF13195 Protein of unknown function (DUF4011) C3Y93_01145 PF13195 Protein of unknown function (DUF4011) C3Y93_01145 PF13087 AAA domain C3Y93_01145 PF13086 AAA domain C3Y93_01145 PF13087 AAA domain C3Y93_01145 PF13086 AAA domain C3Y93_01155 PF00753 Metallo-beta-lactamase superfamily C3Y93_01155 PF14863 Alkyl sulfatase dimerisation C3Y93_01155 PF14864 Alkyl sulfatase C-terminal C3Y93_01165 PF00665 Integrase core domain C3Y93_01165 PF13936 Helix-turn-helix domain C3Y93_01175 PF00149 Calcineurin-like phosphoesterase C3Y93_01205 PF01695 IstB-like ATP binding protein C3Y93_01235 PF02321 Outer membrane efflux protein C3Y93_01240 PF00664 ABC transporter transmembrane region C3Y93_01240 PF03412 Peptidase C39 family C3Y93_01240 PF00005 ABC transporter C3Y93_01245 PF13533 Biotin-lipoyl like C3Y93_01245 PF13533 Biotin-lipoyl like C3Y93_01250 PF13817 IS66 C-terminal element C3Y93_01250 PF13005 zinc-finger binding domain of transposase IS66 C3Y93_01250 PF03050 Transposase IS66 family C3Y93_01250 PF13007 Transposase C of IS166 homeodomain C3Y93_01265 PF02028 BCCT, betaine/carnitine/choline family transporter C3Y93_01285 PF09297 NADH pyrophosphatase zinc ribbon domain C3Y93_01285 PF00293 NUDIX domain C3Y93_01325 PF00512 His Kinase A (phospho-acceptor) domain C3Y93_01325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_01325 PF08521 Two-component sensor kinase N-terminal C3Y93_01330 PF00072 Response regulator receiver domain C3Y93_01330 PF00486 Transcriptional regulatory protein, C terminal C3Y93_01345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_01345 PF03466 LysR substrate binding domain C3Y93_01350 PF00291 Pyridoxal-phosphate dependent enzyme C3Y93_01355 PF00290 Tryptophan synthase alpha chain C3Y93_01360 PF00925 GTP cyclohydrolase II C3Y93_01370 PF01545 Cation efflux family C3Y93_01385 PF00529 HlyD membrane-fusion protein of T1SS C3Y93_01385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3Y93_01390 PF00873 AcrB/AcrD/AcrF family C3Y93_01395 PF05199 GMC oxidoreductase C3Y93_01395 PF00732 GMC oxidoreductase C3Y93_01400 PF00171 Aldehyde dehydrogenase family C3Y93_01405 PF13977 BetI-type transcriptional repressor, C-terminal C3Y93_01405 PF00440 Bacterial regulatory proteins, tetR family C3Y93_01410 PF02028 BCCT, betaine/carnitine/choline family transporter C3Y93_01420 PF04151 Bacterial pre-peptidase C-terminal domain C3Y93_01425 PF03848 Tellurite resistance protein TehB C3Y93_01425 PF09313 Domain of unknown function (DUF1971) C3Y93_01435 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C3Y93_01440 PF02277 Phosphoribosyltransferase C3Y93_01450 PF02654 Cobalamin-5-phosphate synthase C3Y93_01460 PF04055 Radical SAM superfamily C3Y93_01460 PF06968 Biotin and Thiamin Synthesis associated domain C3Y93_01465 PF08331 Domain of unknown function (DUF1730) C3Y93_01470 PF01256 Carbohydrate kinase C3Y93_01470 PF03853 YjeF-related protein N-terminus C3Y93_01475 PF02075 Crossover junction endodeoxyribonuclease RuvC C3Y93_01490 PF01810 LysE type translocator C3Y93_01510 PF02773 S-adenosylmethionine synthetase, C-terminal domain C3Y93_01510 PF02772 S-adenosylmethionine synthetase, central domain C3Y93_01510 PF00438 S-adenosylmethionine synthetase, N-terminal domain C3Y93_01515 PF00456 Transketolase, thiamine diphosphate binding domain C3Y93_01515 PF02780 Transketolase, C-terminal domain C3Y93_01515 PF02779 Transketolase, pyrimidine binding domain C3Y93_01525 PF04264 YceI-like domain C3Y93_01530 PF00117 Glutamine amidotransferase class-I C3Y93_01530 PF00958 GMP synthase C terminal domain C3Y93_01530 PF02540 NAD synthase C3Y93_01535 PF00171 Aldehyde dehydrogenase family C3Y93_01550 PF00465 Iron-containing alcohol dehydrogenase C3Y93_01560 PF14493 Helix-turn-helix domain C3Y93_01560 PF05970 PIF1-like helicase C3Y93_01565 PF00027 Cyclic nucleotide-binding domain C3Y93_01565 PF00520 Ion transport protein C3Y93_01570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_01570 PF03466 LysR substrate binding domain C3Y93_01575 PF07690 Major Facilitator Superfamily C3Y93_01580 PF04284 Protein of unknown function (DUF441) C3Y93_01585 PF01479 S4 domain C3Y93_01585 PF00849 RNA pseudouridylate synthase C3Y93_01600 PF01479 S4 domain C3Y93_01600 PF00849 RNA pseudouridylate synthase C3Y93_01605 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C3Y93_01610 PF01119 DNA mismatch repair protein, C-terminal domain C3Y93_01610 PF08676 MutL C terminal dimerisation domain C3Y93_01620 PF17209 Hfq protein C3Y93_01625 PF09312 SurA N-terminal domain C3Y93_01625 PF00639 PPIC-type PPIASE domain C3Y93_01630 PF03968 OstA-like protein C3Y93_01630 PF04453 LPS transport system D C3Y93_01635 PF01636 Phosphotransferase enzyme family C3Y93_01640 PF00483 Nucleotidyl transferase C3Y93_01645 PF02527 rRNA small subunit methyltransferase G C3Y93_01650 PF13614 AAA domain C3Y93_01655 PF17762 HTH domain found in ParB protein C3Y93_01655 PF02195 ParB-like nuclease domain C3Y93_01660 PF01618 MotA/TolQ/ExbB proton channel family C3Y93_01670 PF00664 ABC transporter transmembrane region C3Y93_01670 PF00005 ABC transporter C3Y93_01675 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C3Y93_01680 PF02348 Cytidylyltransferase C3Y93_01685 PF09115 DNA polymerase III, delta subunit, C terminal C3Y93_01695 PF01026 TatD related DNase C3Y93_01705 PF07963 Prokaryotic N-terminal methylation motif C3Y93_01710 PF07963 Prokaryotic N-terminal methylation motif C3Y93_01710 PF02501 Type II secretion system (T2SS), protein I C3Y93_01715 PF11612 Type II secretion system (T2SS), protein J C3Y93_01715 PF07963 Prokaryotic N-terminal methylation motif C3Y93_01720 PF03934 Type II secretion system (T2SS), protein K C3Y93_01730 PF03167 Uracil DNA glycosylase superfamily C3Y93_01740 PF14437 MafB19-like deaminase C3Y93_01750 PF02224 Cytidylate kinase C3Y93_01755 PF00575 S1 RNA binding domain C3Y93_01760 PF00216 Bacterial DNA-binding protein C3Y93_01770 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C3Y93_01775 PF03956 Lysine exporter LysO C3Y93_01780 PF00743 Flavin-binding monooxygenase-like C3Y93_01785 PF12833 Helix-turn-helix domain C3Y93_01785 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C3Y93_01790 PF03969 AFG1-like ATPase C3Y93_01795 PF01274 Malate synthase C3Y93_01805 PF01695 IstB-like ATP binding protein C3Y93_01810 PF02796 Helix-turn-helix domain of resolvase C3Y93_01810 PF00665 Integrase core domain C3Y93_01830 PF03741 Integral membrane protein TerC family C3Y93_01830 PF03471 Transporter associated domain C3Y93_01850 PF05525 Branched-chain amino acid transport protein C3Y93_01855 PF00557 Metallopeptidase family M24 C3Y93_01860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_01860 PF03466 LysR substrate binding domain C3Y93_01865 PF02824 TGS domain C3Y93_01865 PF04607 Region found in RelA / SpoT proteins C3Y93_01865 PF13291 ACT domain C3Y93_01875 PF02954 Bacterial regulatory protein, Fis family C3Y93_01875 PF00072 Response regulator receiver domain C3Y93_01875 PF00158 Sigma-54 interaction domain C3Y93_01880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_01880 PF00989 PAS fold C3Y93_01880 PF00512 His Kinase A (phospho-acceptor) domain C3Y93_01890 PF04055 Radical SAM superfamily C3Y93_01890 PF18693 TRAM domain C3Y93_01890 PF00919 Uncharacterized protein family UPF0004 C3Y93_01895 PF00696 Amino acid kinase family C3Y93_01900 PF01765 Ribosome recycling factor C3Y93_01905 PF01255 Putative undecaprenyl diphosphate synthase C3Y93_01915 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C3Y93_01915 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C3Y93_01915 PF13288 DXP reductoisomerase C-terminal domain C3Y93_01920 PF13180 PDZ domain C3Y93_01920 PF17820 PDZ domain C3Y93_01920 PF02163 Peptidase family M50 C3Y93_01925 PF07244 Surface antigen variable number repeat C3Y93_01925 PF01103 Surface antigen C3Y93_01935 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C3Y93_01935 PF00132 Bacterial transferase hexapeptide (six repeats) C3Y93_01940 PF07977 FabA-like domain C3Y93_01945 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C3Y93_01945 PF00132 Bacterial transferase hexapeptide (six repeats) C3Y93_01950 PF03050 Transposase IS66 family C3Y93_01950 PF13817 IS66 C-terminal element C3Y93_01950 PF13007 Transposase C of IS166 homeodomain C3Y93_01950 PF13005 zinc-finger binding domain of transposase IS66 C3Y93_01975 PF02631 RecX family C3Y93_01980 PF00154 recA bacterial DNA recombination protein C3Y93_01985 PF01479 S4 domain C3Y93_01990 PF13419 Haloacid dehalogenase-like hydrolase C3Y93_02020 PF00459 Inositol monophosphatase family C3Y93_02030 PF12561 ToxR activated gene A lipoprotein domain C3Y93_02030 PF00041 Fibronectin type III domain C3Y93_02035 PF01649 Ribosomal protein S20 C3Y93_02040 PF13460 NAD(P)H-binding C3Y93_02045 PF03737 Aldolase/RraA C3Y93_02060 PF00271 Helicase conserved C-terminal domain C3Y93_02060 PF00270 DEAD/DEAH box helicase C3Y93_02060 PF02559 CarD-like/TRCF domain C3Y93_02060 PF03461 TRCF domain C3Y93_02060 PF17757 UvrB interaction domain C3Y93_02070 PF00211 Adenylate and Guanylate cyclase catalytic domain C3Y93_02085 PF00111 2Fe-2S iron-sulfur cluster binding domain C3Y93_02090 PF00012 Hsp70 protein C3Y93_02095 PF07743 HSCB C-terminal oligomerisation domain C3Y93_02095 PF00226 DnaJ domain C3Y93_02100 PF01521 Iron-sulphur cluster biosynthesis C3Y93_02105 PF01592 NifU-like N terminal domain C3Y93_02110 PF00266 Aminotransferase class-V C3Y93_02115 PF02082 Transcriptional regulator C3Y93_02130 PF00216 Bacterial DNA-binding protein C3Y93_02135 PF09312 SurA N-terminal domain C3Y93_02160 PF01230 HIT domain C3Y93_02170 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C3Y93_02170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C3Y93_02180 PF01053 Cys/Met metabolism PLP-dependent enzyme C3Y93_02185 PF02575 YbaB/EbfC DNA-binding family C3Y93_02190 PF02132 RecR protein C3Y93_02190 PF13662 Toprim domain C3Y93_02195 PF00570 HRDC domain C3Y93_02195 PF01612 3'-5' exonuclease C3Y93_02200 PF05166 YcgL domain C3Y93_02210 PF01434 Peptidase family M41 C3Y93_02210 PF17862 AAA+ lid domain C3Y93_02210 PF00004 ATPase family associated with various cellular activities (AAA) C3Y93_02220 PF00291 Pyridoxal-phosphate dependent enzyme C3Y93_02225 PF00571 CBS domain C3Y93_02255 PF05193 Peptidase M16 inactive domain C3Y93_02255 PF00675 Insulinase (Peptidase family M16) C3Y93_02260 PF02881 SRP54-type protein, helical bundle domain C3Y93_02260 PF00448 SRP54-type protein, GTPase domain C3Y93_02310 PF02690 Na+/Pi-cotransporter C3Y93_02315 PF04073 Aminoacyl-tRNA editing domain C3Y93_02320 PF04143 Sulphur transport C3Y93_02330 PF00753 Metallo-beta-lactamase superfamily C3Y93_02335 PF12697 Alpha/beta hydrolase family C3Y93_02340 PF02785 Biotin carboxylase C-terminal domain C3Y93_02340 PF00289 Biotin carboxylase, N-terminal domain C3Y93_02340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3Y93_02345 PF00364 Biotin-requiring enzyme C3Y93_02350 PF01220 Dehydroquinase class II C3Y93_02355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_02355 PF08521 Two-component sensor kinase N-terminal C3Y93_02355 PF00512 His Kinase A (phospho-acceptor) domain C3Y93_02360 PF00486 Transcriptional regulatory protein, C terminal C3Y93_02360 PF00072 Response regulator receiver domain C3Y93_02365 PF02683 Cytochrome C biogenesis protein transmembrane region C3Y93_02365 PF11412 Disulphide bond corrector protein DsbC C3Y93_02370 PF08534 Redoxin C3Y93_02375 PF13098 Thioredoxin-like domain C3Y93_02385 PF02627 Carboxymuconolactone decarboxylase family C3Y93_02390 PF18381 YcaO cyclodehydratase C-terminal domain C3Y93_02390 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding C3Y93_02405 PF11798 IMS family HHH motif C3Y93_02405 PF11799 impB/mucB/samB family C-terminal domain C3Y93_02405 PF00817 impB/mucB/samB family C3Y93_02405 PF13438 Domain of unknown function (DUF4113) C3Y93_02410 PF00717 Peptidase S24-like C3Y93_02420 PF01636 Phosphotransferase enzyme family C3Y93_02440 PF04055 Radical SAM superfamily C3Y93_02445 PF00676 Dehydrogenase E1 component C3Y93_02450 PF02780 Transketolase, C-terminal domain C3Y93_02450 PF02779 Transketolase, pyrimidine binding domain C3Y93_02455 PF02817 e3 binding domain C3Y93_02455 PF00364 Biotin-requiring enzyme C3Y93_02455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3Y93_02460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3Y93_02460 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3Y93_02470 PF08240 Alcohol dehydrogenase GroES-like domain C3Y93_02470 PF00107 Zinc-binding dehydrogenase C3Y93_02475 PF09905 DNA-binding protein VF530 C3Y93_02490 PF00664 ABC transporter transmembrane region C3Y93_02490 PF00005 ABC transporter C3Y93_02495 PF12833 Helix-turn-helix domain C3Y93_02495 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C3Y93_02500 PF01597 Glycine cleavage H-protein C3Y93_02505 PF07690 Major Facilitator Superfamily C3Y93_02510 PF00793 DAHP synthetase I family C3Y93_02515 PF00107 Zinc-binding dehydrogenase C3Y93_02515 PF08240 Alcohol dehydrogenase GroES-like domain C3Y93_02520 PF13091 PLD-like domain C3Y93_02540 PF00106 short chain dehydrogenase C3Y93_02555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3Y93_02555 PF02770 Acyl-CoA dehydrogenase, middle domain C3Y93_02555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3Y93_02560 PF03466 LysR substrate binding domain C3Y93_02560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_02580 PF10415 Fumarase C C-terminus C3Y93_02580 PF00206 Lyase C3Y93_02585 PF16363 GDP-mannose 4,6 dehydratase C3Y93_02590 PF02635 DsrE/DsrF-like family C3Y93_02610 PF01638 HxlR-like helix-turn-helix C3Y93_02630 PF00392 Bacterial regulatory proteins, gntR family C3Y93_02630 PF00155 Aminotransferase class I and II C3Y93_02640 PF07690 Major Facilitator Superfamily C3Y93_02645 PF03466 LysR substrate binding domain C3Y93_02645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_02650 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C3Y93_02650 PF13378 Enolase C-terminal domain-like C3Y93_02655 PF02426 Muconolactone delta-isomerase C3Y93_02660 PF04444 Catechol dioxygenase N terminus C3Y93_02660 PF00775 Dioxygenase C3Y93_02665 PF00355 Rieske [2Fe-2S] domain C3Y93_02665 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C3Y93_02670 PF00866 Ring hydroxylating beta subunit C3Y93_02675 PF00111 2Fe-2S iron-sulfur cluster binding domain C3Y93_02675 PF00970 Oxidoreductase FAD-binding domain C3Y93_02675 PF00175 Oxidoreductase NAD-binding domain C3Y93_02680 PF00106 short chain dehydrogenase C3Y93_02685 PF03594 Benzoate membrane transport protein C3Y93_02690 PF01144 Coenzyme A transferase C3Y93_02695 PF01144 Coenzyme A transferase C3Y93_02700 PF00108 Thiolase, N-terminal domain C3Y93_02700 PF02803 Thiolase, C-terminal domain C3Y93_02705 PF12146 Serine aminopeptidase, S33 C3Y93_02710 PF02803 Thiolase, C-terminal domain C3Y93_02710 PF00108 Thiolase, N-terminal domain C3Y93_02715 PF00440 Bacterial regulatory proteins, tetR family C3Y93_02715 PF08360 QacR-like protein, C-terminal region C3Y93_02720 PF00291 Pyridoxal-phosphate dependent enzyme C3Y93_02725 PF01553 Acyltransferase C3Y93_02735 PF01740 STAS domain C3Y93_02735 PF00916 Sulfate permease family C3Y93_02740 PF00375 Sodium:dicarboxylate symporter family C3Y93_02745 PF06912 Protein of unknown function (DUF1275) C3Y93_02750 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) C3Y93_02755 PF00924 Mechanosensitive ion channel C3Y93_02765 PF17151 Periplasmic sensor domain C3Y93_02765 PF00990 Diguanylate cyclase, GGDEF domain C3Y93_02770 PF01425 Amidase C3Y93_02775 PF12832 MFS_1 like family C3Y93_02785 PF00717 Peptidase S24-like C3Y93_02790 PF13438 Domain of unknown function (DUF4113) C3Y93_02790 PF00817 impB/mucB/samB family C3Y93_02790 PF11799 impB/mucB/samB family C-terminal domain C3Y93_02795 PF00182 Chitinase class I C3Y93_02890 PF07030 Protein of unknown function (DUF1320) C3Y93_03025 PF00717 Peptidase S24-like C3Y93_03025 PF01726 LexA DNA binding domain C3Y93_03140 PF18146 Damage-inducible protein CinA KH domain C3Y93_03140 PF02464 Competence-damaged protein C3Y93_03140 PF00994 Probable molybdopterin binding domain C3Y93_03155 PF00285 Citrate synthase, C-terminal domain C3Y93_03165 PF00440 Bacterial regulatory proteins, tetR family C3Y93_03170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3Y93_03170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3Y93_03180 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C3Y93_03185 PF10431 C-terminal, D2-small domain, of ClpB protein C3Y93_03185 PF07724 AAA domain (Cdc48 subfamily) C3Y93_03185 PF02861 Clp amino terminal domain, pathogenicity island component C3Y93_03185 PF17871 AAA lid domain C3Y93_03185 PF00004 ATPase family associated with various cellular activities (AAA) C3Y93_03190 PF02617 ATP-dependent Clp protease adaptor protein ClpS C3Y93_03200 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3Y93_03200 PF02774 Semialdehyde dehydrogenase, dimerisation domain C3Y93_03210 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C3Y93_03215 PF00291 Pyridoxal-phosphate dependent enzyme C3Y93_03215 PF00585 C-terminal regulatory domain of Threonine dehydratase C3Y93_03220 PF02254 TrkA-N domain C3Y93_03220 PF02080 TrkA-C domain C3Y93_03225 PF02386 Cation transport protein C3Y93_03230 PF02253 Phospholipase A1 C3Y93_03235 PF05193 Peptidase M16 inactive domain C3Y93_03235 PF00675 Insulinase (Peptidase family M16) C3Y93_03235 PF08367 Peptidase M16C associated C3Y93_03245 PF00294 pfkB family carbohydrate kinase C3Y93_03255 PF07290 Protein of unknown function (DUF1449) C3Y93_03265 PF01654 Cytochrome bd terminal oxidase subunit I C3Y93_03270 PF02322 Cytochrome bd terminal oxidase subunit II C3Y93_03275 PF08173 Membrane bound YbgT-like protein C3Y93_03285 PF01264 Chorismate synthase C3Y93_03290 PF05175 Methyltransferase small domain C3Y93_03305 PF03109 ABC1 family C3Y93_03310 PF02770 Acyl-CoA dehydrogenase, middle domain C3Y93_03310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3Y93_03310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3Y93_03315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3Y93_03315 PF02770 Acyl-CoA dehydrogenase, middle domain C3Y93_03315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3Y93_03320 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system C3Y93_03330 PF00487 Fatty acid desaturase C3Y93_03335 PF12852 Cupin C3Y93_03335 PF12833 Helix-turn-helix domain C3Y93_03340 PF02684 Lipid-A-disaccharide synthetase C3Y93_03345 PF01925 Sulfite exporter TauE/SafE C3Y93_03350 PF00793 DAHP synthetase I family C3Y93_03360 PF02542 YgbB family C3Y93_03375 PF01098 Cell cycle protein C3Y93_03380 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C3Y93_03385 PF04977 Septum formation initiator C3Y93_03390 PF03952 Enolase, N-terminal domain C3Y93_03390 PF00113 Enolase, C-terminal TIM barrel domain C3Y93_03395 PF00793 DAHP synthetase I family C3Y93_03400 PF00117 Glutamine amidotransferase class-I C3Y93_03400 PF06418 CTP synthase N-terminus C3Y93_03420 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3Y93_03420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3Y93_03430 PF12697 Alpha/beta hydrolase family C3Y93_03435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3Y93_03435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3Y93_03435 PF02770 Acyl-CoA dehydrogenase, middle domain C3Y93_03440 PF02146 Sir2 family C3Y93_03445 PF05958 tRNA (Uracil-5-)-methyltransferase C3Y93_03470 PF00749 tRNA synthetases class I (E and Q), catalytic domain C3Y93_03470 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C3Y93_03475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C3Y93_03480 PF00149 Calcineurin-like phosphoesterase C3Y93_03485 PF03328 HpcH/HpaI aldolase/citrate lyase family C3Y93_03490 PF00881 Nitroreductase family C3Y93_03505 PF01116 Fructose-bisphosphate aldolase class-II C3Y93_03515 PF00162 Phosphoglycerate kinase C3Y93_03525 PF02545 Maf-like protein C3Y93_03530 PF08007 Cupin superfamily protein C3Y93_03535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_03535 PF13492 GAF domain C3Y93_03535 PF07730 Histidine kinase C3Y93_03540 PF00072 Response regulator receiver domain C3Y93_03540 PF00196 Bacterial regulatory proteins, luxR family C3Y93_03555 PF01565 FAD binding domain C3Y93_03555 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C3Y93_03560 PF01451 Low molecular weight phosphotyrosine protein phosphatase C3Y93_03565 PF00465 Iron-containing alcohol dehydrogenase C3Y93_03570 PF03061 Thioesterase superfamily C3Y93_03575 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C3Y93_03575 PF12170 DNA polymerase III tau subunit V interacting with alpha C3Y93_03575 PF12169 DNA polymerase III subunits gamma and tau domain III C3Y93_03595 PF02803 Thiolase, C-terminal domain C3Y93_03595 PF00108 Thiolase, N-terminal domain C3Y93_03605 PF03466 LysR substrate binding domain C3Y93_03605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_03610 PF00923 Transaldolase/Fructose-6-phosphate aldolase C3Y93_03615 PF01810 LysE type translocator C3Y93_03620 PF03594 Benzoate membrane transport protein C3Y93_03630 PF00582 Universal stress protein family C3Y93_03635 PF00582 Universal stress protein family C3Y93_03645 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3Y93_03645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3Y93_03650 PF01433 Peptidase family M1 domain C3Y93_03650 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C3Y93_03650 PF11940 Domain of unknown function (DUF3458) Ig-like fold C3Y93_03665 PF06434 Aconitate hydratase 2 N-terminus C3Y93_03665 PF00330 Aconitase family (aconitate hydratase) C3Y93_03665 PF11791 Aconitate B N-terminal domain C3Y93_03685 PF17243 POTRA domain TamA domain 1 C3Y93_03685 PF07244 Surface antigen variable number repeat C3Y93_03685 PF01103 Surface antigen C3Y93_03690 PF07690 Major Facilitator Superfamily C3Y93_03695 PF03232 Ubiquinone biosynthesis protein COQ7 C3Y93_03705 PF02152 Dihydroneopterin aldolase C3Y93_03710 PF03109 ABC1 family C3Y93_03715 PF00899 ThiF family C3Y93_03725 PF13193 AMP-binding enzyme C-terminal domain C3Y93_03725 PF00501 AMP-binding enzyme C3Y93_03730 PF02770 Acyl-CoA dehydrogenase, middle domain C3Y93_03730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3Y93_03730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3Y93_03735 PF00106 short chain dehydrogenase C3Y93_03750 PF01062 Bestrophin, RFP-TM, chloride channel C3Y93_03755 PF17827 PrmC N-terminal domain C3Y93_03755 PF13847 Methyltransferase domain C3Y93_03760 PF00472 RF-1 domain C3Y93_03760 PF03462 PCRF domain C3Y93_03775 PF00296 Luciferase-like monooxygenase C3Y93_03785 PF03618 Kinase/pyrophosphorylase C3Y93_03790 PF00391 PEP-utilising enzyme, mobile domain C3Y93_03790 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C3Y93_03790 PF02896 PEP-utilising enzyme, TIM barrel domain C3Y93_03800 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C3Y93_03800 PF06481 COX Aromatic Rich Motif C3Y93_03805 PF00115 Cytochrome C and Quinol oxidase polypeptide I C3Y93_03810 PF00510 Cytochrome c oxidase subunit III C3Y93_03815 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C3Y93_03820 PF01040 UbiA prenyltransferase family C3Y93_03825 PF01250 Ribosomal protein S6 C3Y93_03830 PF01084 Ribosomal protein S18 C3Y93_03835 PF03948 Ribosomal protein L9, C-terminal domain C3Y93_03835 PF01281 Ribosomal protein L9, N-terminal domain C3Y93_03840 PF03796 DnaB-like helicase C terminal domain C3Y93_03840 PF00772 DnaB-like helicase N terminal domain C3Y93_03850 PF00842 Alanine racemase, C-terminal domain C3Y93_03850 PF01168 Alanine racemase, N-terminal domain C3Y93_03855 PF00106 short chain dehydrogenase C3Y93_03865 PF00561 alpha/beta hydrolase fold C3Y93_03865 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C3Y93_03870 PF00108 Thiolase, N-terminal domain C3Y93_03870 PF02803 Thiolase, C-terminal domain C3Y93_03885 PF13932 GidA associated domain C3Y93_03885 PF01134 Glucose inhibited division protein A C3Y93_03915 PF02954 Bacterial regulatory protein, Fis family C3Y93_03920 PF02142 MGS-like domain C3Y93_03920 PF01808 AICARFT/IMPCHase bienzyme C3Y93_03925 PF02843 Phosphoribosylglycinamide synthetase, C domain C3Y93_03925 PF02844 Phosphoribosylglycinamide synthetase, N domain C3Y93_03925 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C3Y93_03930 PF03180 NLPA lipoprotein C3Y93_03935 PF00005 ABC transporter C3Y93_03935 PF09383 NIL domain C3Y93_03940 PF00528 Binding-protein-dependent transport system inner membrane component C3Y93_03945 PF14579 Helix-hairpin-helix motif C3Y93_03945 PF01336 OB-fold nucleic acid binding domain C3Y93_03945 PF02811 PHP domain C3Y93_03945 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3Y93_03945 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3Y93_03950 PF00588 SpoU rRNA Methylase family C3Y93_03955 PF00132 Bacterial transferase hexapeptide (six repeats) C3Y93_03985 PF00581 Rhodanese-like domain C3Y93_04015 PF01661 Macro domain C3Y93_04020 PF12008 Type I restriction and modification enzyme - subunit R C terminal C3Y93_04020 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C3Y93_04020 PF18766 SWI2/SNF2 ATPase C3Y93_04035 PF02384 N-6 DNA Methylase C3Y93_04035 PF12161 HsdM N-terminal domain C3Y93_04050 PF05930 Prophage CP4-57 regulatory protein (AlpA) C3Y93_04060 PF13007 Transposase C of IS166 homeodomain C3Y93_04060 PF03050 Transposase IS66 family C3Y93_04060 PF13817 IS66 C-terminal element C3Y93_04060 PF13005 zinc-finger binding domain of transposase IS66 C3Y93_04105 PF13356 Arm DNA-binding domain C3Y93_04105 PF00589 Phage integrase family C3Y93_04110 PF01624 MutS domain I C3Y93_04110 PF05190 MutS family domain IV C3Y93_04110 PF05192 MutS domain III C3Y93_04110 PF00488 MutS domain V C3Y93_04110 PF05188 MutS domain II C3Y93_04115 PF11953 Domain of unknown function (DUF3470) C3Y93_04115 PF00037 4Fe-4S binding domain C3Y93_04125 PF01596 O-methyltransferase C3Y93_04140 PF01205 Uncharacterized protein family UPF0029 C3Y93_04145 PF00005 ABC transporter C3Y93_04145 PF12399 Branched-chain amino acid ATP-binding cassette transporter C3Y93_04150 PF03968 OstA-like protein C3Y93_04165 PF01380 SIS domain C3Y93_04165 PF00571 CBS domain C3Y93_04175 PF09190 DALR domain C3Y93_04175 PF01406 tRNA synthetases class I (C) catalytic domain C3Y93_04180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C3Y93_04180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C3Y93_04185 PF04408 Helicase associated domain (HA2) C3Y93_04185 PF00271 Helicase conserved C-terminal domain C3Y93_04185 PF00270 DEAD/DEAH box helicase C3Y93_04185 PF11898 Domain of unknown function (DUF3418) C3Y93_04185 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C3Y93_04190 PF00578 AhpC/TSA family C3Y93_04190 PF10417 C-terminal domain of 1-Cys peroxiredoxin C3Y93_04220 PF03060 Nitronate monooxygenase C3Y93_04225 PF01207 Dihydrouridine synthase (Dus) C3Y93_04230 PF07759 Protein of unknown function (DUF1615) C3Y93_04240 PF00487 Fatty acid desaturase C3Y93_04245 PF00175 Oxidoreductase NAD-binding domain C3Y93_04245 PF00042 Globin C3Y93_04245 PF00970 Oxidoreductase FAD-binding domain C3Y93_04250 PF00440 Bacterial regulatory proteins, tetR family C3Y93_04260 PF18339 RapA N-terminal Tudor like domain 1 C3Y93_04260 PF00271 Helicase conserved C-terminal domain C3Y93_04260 PF12137 RNA polymerase recycling family C-terminal C3Y93_04260 PF00176 SNF2 family N-terminal domain C3Y93_04260 PF18337 RapA N-terminal Tudor like domain C3Y93_04265 PF00849 RNA pseudouridylate synthase C3Y93_04270 PF00202 Aminotransferase class-III C3Y93_04275 PF02581 Thiamine monophosphate synthase C3Y93_04315 PF05193 Peptidase M16 inactive domain C3Y93_04315 PF00675 Insulinase (Peptidase family M16) C3Y93_04320 PF02567 Phenazine biosynthesis-like protein C3Y93_04325 PF00849 RNA pseudouridylate synthase C3Y93_04335 PF00768 D-alanyl-D-alanine carboxypeptidase C3Y93_04335 PF07943 Penicillin-binding protein 5, C-terminal domain C3Y93_04340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3Y93_04345 PF00875 DNA photolyase C3Y93_04345 PF03441 FAD binding domain of DNA photolyase C3Y93_04350 PF03883 Peroxide stress protein YaaA C3Y93_04360 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C3Y93_04365 PF00155 Aminotransferase class I and II C3Y93_04370 PF00800 Prephenate dehydratase C3Y93_04370 PF01817 Chorismate mutase type II C3Y93_04370 PF01842 ACT domain C3Y93_04380 PF02770 Acyl-CoA dehydrogenase, middle domain C3Y93_04380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3Y93_04380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3Y93_04385 PF02885 Glycosyl transferase family, helical bundle domain C3Y93_04385 PF00591 Glycosyl transferase family, a/b domain C3Y93_04390 PF07023 Protein of unknown function (DUF1315) C3Y93_04395 PF01513 ATP-NAD kinase C3Y93_04400 PF00912 Transglycosylase C3Y93_04400 PF00905 Penicillin binding protein transpeptidase domain C3Y93_04400 PF14814 Bifunctional transglycosylase second domain C3Y93_04410 PF02581 Thiamine monophosphate synthase C3Y93_04420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_04420 PF00512 His Kinase A (phospho-acceptor) domain C3Y93_04420 PF08521 Two-component sensor kinase N-terminal C3Y93_04425 PF00486 Transcriptional regulatory protein, C terminal C3Y93_04425 PF00072 Response regulator receiver domain C3Y93_04435 PF00437 Type II/IV secretion system protein C3Y93_04435 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C3Y93_04445 PF18389 TrmO C-terminal domain C3Y93_04445 PF01980 tRNA-methyltransferase O C3Y93_04450 PF00175 Oxidoreductase NAD-binding domain C3Y93_04450 PF00970 Oxidoreductase FAD-binding domain C3Y93_04470 PF13411 MerR HTH family regulatory protein C3Y93_04475 PF03358 NADPH-dependent FMN reductase C3Y93_04480 PF01758 Sodium Bile acid symporter family C3Y93_04485 PF01022 Bacterial regulatory protein, arsR family C3Y93_04490 PF03960 ArsC family C3Y93_04500 PF00037 4Fe-4S binding domain C3Y93_04505 PF13192 Thioredoxin domain C3Y93_04505 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3Y93_04515 PF05816 Toxic anion resistance protein (TelA) C3Y93_04525 PF03449 Transcription elongation factor, N-terminal C3Y93_04525 PF01272 Transcription elongation factor, GreA/GreB, C-term C3Y93_04530 PF00464 Serine hydroxymethyltransferase C3Y93_04565 PF02661 Fic/DOC family C3Y93_04565 PF13784 Fic/DOC family N-terminal C3Y93_04585 PF01695 IstB-like ATP binding protein C3Y93_04590 PF02796 Helix-turn-helix domain of resolvase C3Y93_04590 PF00665 Integrase core domain C3Y93_04655 PF08241 Methyltransferase domain C3Y93_04685 PF13817 IS66 C-terminal element C3Y93_04685 PF13007 Transposase C of IS166 homeodomain C3Y93_04685 PF13005 zinc-finger binding domain of transposase IS66 C3Y93_04685 PF03050 Transposase IS66 family C3Y93_04700 PF00589 Phage integrase family C3Y93_04700 PF13356 Arm DNA-binding domain C3Y93_04705 PF00589 Phage integrase family C3Y93_04705 PF13356 Arm DNA-binding domain C3Y93_04720 PF01757 Acyltransferase family C3Y93_04855 PF00717 Peptidase S24-like C3Y93_04870 PF06630 Enterobacterial exodeoxyribonuclease VIII C3Y93_04870 PF12684 PDDEXK-like domain of unknown function (DUF3799) C3Y93_04905 PF00589 Phage integrase family C3Y93_04905 PF13356 Arm DNA-binding domain C3Y93_04915 PF00005 ABC transporter C3Y93_04920 PF01061 ABC-2 type transporter C3Y93_04925 PF14489 QueF-like protein C3Y93_04925 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C3Y93_04935 PF13406 Transglycosylase SLT domain C3Y93_04940 PF03330 Lytic transglycolase C3Y93_04940 PF05036 Sporulation related domain C3Y93_04955 PF00889 Elongation factor TS C3Y93_04960 PF00318 Ribosomal protein S2 C3Y93_04965 PF00557 Metallopeptidase family M24 C3Y93_04985 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3Y93_04985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3Y93_04990 PF04055 Radical SAM superfamily C3Y93_05005 PF08238 Sel1 repeat C3Y93_05030 PF05221 S-adenosyl-L-homocysteine hydrolase C3Y93_05030 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C3Y93_05035 PF02219 Methylenetetrahydrofolate reductase C3Y93_05040 PF04452 RNA methyltransferase C3Y93_05045 PF00990 Diguanylate cyclase, GGDEF domain C3Y93_05045 PF00563 EAL domain C3Y93_05045 PF03707 Bacterial signalling protein N terminal repeat C3Y93_05050 PF00390 Malic enzyme, N-terminal domain C3Y93_05050 PF01515 Phosphate acetyl/butaryl transferase C3Y93_05050 PF03949 Malic enzyme, NAD binding domain C3Y93_05055 PF01743 Poly A polymerase head domain C3Y93_05055 PF12627 Probable RNA and SrmB- binding site of polymerase A C3Y93_05060 PF00152 tRNA synthetases class II (D, K and N) C3Y93_05065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3Y93_05065 PF11890 Domain of unknown function (DUF3410) C3Y93_05065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3Y93_05070 PF02769 AIR synthase related protein, C-terminal domain C3Y93_05070 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C3Y93_05070 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C3Y93_05075 PF00691 OmpA family C3Y93_05075 PF13488 Glycine zipper C3Y93_05085 PF13737 Transposase DDE domain C3Y93_05090 PF04829 Pre-toxin domain with VENN motif C3Y93_05090 PF05860 haemagglutination activity domain C3Y93_05090 PF13332 Hemagglutinin repeat C3Y93_05095 PF08479 POTRA domain, ShlB-type C3Y93_05095 PF17287 POTRA domain C3Y93_05095 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB C3Y93_05120 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3Y93_05120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3Y93_05125 PF00764 Arginosuccinate synthase C3Y93_05130 PF07282 Putative transposase DNA-binding domain C3Y93_05130 PF01385 Probable transposase C3Y93_05130 PF12323 Helix-turn-helix domain C3Y93_05140 PF00563 EAL domain C3Y93_05140 PF01590 GAF domain C3Y93_05140 PF00990 Diguanylate cyclase, GGDEF domain C3Y93_05140 PF00360 Phytochrome region C3Y93_05145 PF01979 Amidohydrolase family C3Y93_05150 PF00929 Exonuclease C3Y93_05160 PF00324 Amino acid permease C3Y93_05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3Y93_05180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3Y93_05185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3Y93_05185 PF00005 ABC transporter C3Y93_05190 PF12911 N-terminal TM domain of oligopeptide transport permease C C3Y93_05190 PF00528 Binding-protein-dependent transport system inner membrane component C3Y93_05195 PF00528 Binding-protein-dependent transport system inner membrane component C3Y93_05200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3Y93_05205 PF01464 Transglycosylase SLT domain C3Y93_05205 PF01476 LysM domain C3Y93_05205 PF01464 Transglycosylase SLT domain C3Y93_05205 PF01476 LysM domain C3Y93_05210 PF00929 Exonuclease C3Y93_05220 PF00293 NUDIX domain C3Y93_05220 PF09297 NADH pyrophosphatase zinc ribbon domain C3Y93_05225 PF00135 Carboxylesterase family C3Y93_05230 PF04972 BON domain C3Y93_05235 PF02021 Uncharacterised protein family UPF0102 C3Y93_05240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3Y93_05250 PF01494 FAD binding domain C3Y93_05255 PF01494 FAD binding domain C3Y93_05260 PF04221 RelB antitoxin C3Y93_05270 PF05195 Aminopeptidase P, N-terminal domain C3Y93_05270 PF00557 Metallopeptidase family M24 C3Y93_05275 PF03695 Uncharacterised protein family (UPF0149) C3Y93_05300 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system C3Y93_05305 PF01613 Flavin reductase like domain C3Y93_05310 PF01717 Cobalamin-independent synthase, Catalytic domain C3Y93_05325 PF00403 Heavy-metal-associated domain C3Y93_05330 PF09278 MerR, DNA binding C3Y93_05330 PF00376 MerR family regulatory protein C3Y93_05345 PF00884 Sulfatase C3Y93_05345 PF08019 Phosphoethanolamine transferase EptA/EptB C3Y93_05350 PF00072 Response regulator receiver domain C3Y93_05350 PF00486 Transcriptional regulatory protein, C terminal C3Y93_05355 PF08521 Two-component sensor kinase N-terminal C3Y93_05355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_05355 PF00512 His Kinase A (phospho-acceptor) domain C3Y93_05365 PF01219 Prokaryotic diacylglycerol kinase C3Y93_05375 PF00072 Response regulator receiver domain C3Y93_05375 PF00990 Diguanylate cyclase, GGDEF domain C3Y93_05385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_05385 PF03466 LysR substrate binding domain C3Y93_05390 PF09330 D-lactate dehydrogenase, membrane binding C3Y93_05390 PF01565 FAD binding domain C3Y93_05395 PF01070 FMN-dependent dehydrogenase C3Y93_05400 PF00392 Bacterial regulatory proteins, gntR family C3Y93_05400 PF07729 FCD domain C3Y93_05405 PF02652 L-lactate permease C3Y93_05420 PF01812 5-formyltetrahydrofolate cyclo-ligase family C3Y93_05425 PF00004 ATPase family associated with various cellular activities (AAA) C3Y93_05425 PF05362 Lon protease (S16) C-terminal proteolytic domain C3Y93_05425 PF02190 ATP-dependent protease La (LON) substrate-binding domain C3Y93_05430 PF04389 Peptidase family M28 C3Y93_05435 PF02590 Predicted SPOUT methyltransferase C3Y93_05450 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C3Y93_05450 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C3Y93_05455 PF04060 Putative Fe-S cluster C3Y93_05460 PF10576 Iron-sulfur binding domain of endonuclease III C3Y93_05460 PF00730 HhH-GPD superfamily base excision DNA repair protein C3Y93_05460 PF00633 Helix-hairpin-helix motif C3Y93_05470 PF05191 Adenylate kinase, active site lid C3Y93_05485 PF03717 Penicillin-binding Protein dimerisation domain C3Y93_05485 PF00905 Penicillin binding protein transpeptidase domain C3Y93_05500 PF01553 Acyltransferase C3Y93_05510 PF00463 Isocitrate lyase family C3Y93_05515 PF03466 LysR substrate binding domain C3Y93_05515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_05520 PF00571 CBS domain C3Y93_05520 PF01595 Cyclin M transmembrane N-terminal domain C3Y93_05520 PF03471 Transporter associated domain C3Y93_05535 PF00107 Zinc-binding dehydrogenase C3Y93_05535 PF08240 Alcohol dehydrogenase GroES-like domain C3Y93_05540 PF00085 Thioredoxin C3Y93_05545 PF00990 Diguanylate cyclase, GGDEF domain C3Y93_05550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3Y93_05555 PF07152 YaeQ protein C3Y93_05560 PF07683 Cobalamin synthesis protein cobW C-terminal domain C3Y93_05560 PF02492 CobW/HypB/UreG, nucleotide-binding domain C3Y93_05570 PF03061 Thioesterase superfamily C3Y93_05575 PF01734 Patatin-like phospholipase C3Y93_05580 PF02417 Chromate transporter C3Y93_05585 PF03616 Sodium/glutamate symporter C3Y93_05595 PF07690 Major Facilitator Superfamily C3Y93_05600 PF12805 FUSC-like inner membrane protein yccS C3Y93_05610 PF00258 Flavodoxin C3Y93_05610 PF00175 Oxidoreductase NAD-binding domain C3Y93_05610 PF00667 FAD binding domain C3Y93_05670 PF04304 Protein of unknown function (DUF454) C3Y93_05680 PF08085 Entericidin EcnA/B family C3Y93_05685 PF07687 Peptidase dimerisation domain C3Y93_05685 PF01546 Peptidase family M20/M25/M40 C3Y93_05695 PF01627 Hpt domain C3Y93_05695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_05695 PF02895 Signal transducing histidine kinase, homodimeric domain C3Y93_05695 PF01584 CheW-like domain C3Y93_05695 PF07194 P2 response regulator binding domain C3Y93_05695 PF07194 P2 response regulator binding domain C3Y93_05695 PF02895 Signal transducing histidine kinase, homodimeric domain C3Y93_05695 PF01627 Hpt domain C3Y93_05695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_05695 PF01584 CheW-like domain C3Y93_05700 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C3Y93_05700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3Y93_05705 PF01584 CheW-like domain C3Y93_05710 PF00072 Response regulator receiver domain C3Y93_05715 PF00072 Response regulator receiver domain C3Y93_05725 PF13533 Biotin-lipoyl like C3Y93_05730 PF00873 AcrB/AcrD/AcrF family C3Y93_05735 PF03129 Anticodon binding domain C3Y93_05735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3Y93_05735 PF04073 Aminoacyl-tRNA editing domain C3Y93_05760 PF00692 dUTPase C3Y93_05770 PF10609 NUBPL iron-transfer P-loop NTPase C3Y93_05775 PF09334 tRNA synthetases class I (M) C3Y93_05775 PF01588 Putative tRNA binding domain C3Y93_05800 PF06100 MCRA family C3Y93_05810 PF00291 Pyridoxal-phosphate dependent enzyme C3Y93_05820 PF05552 Conserved TM helix C3Y93_05840 PF00970 Oxidoreductase FAD-binding domain C3Y93_05840 PF00175 Oxidoreductase NAD-binding domain C3Y93_05845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_05845 PF03466 LysR substrate binding domain C3Y93_05850 PF00313 'Cold-shock' DNA-binding domain C3Y93_05855 PF00313 'Cold-shock' DNA-binding domain C3Y93_05865 PF00361 Proton-conducting membrane transporter C3Y93_05870 PF00361 Proton-conducting membrane transporter C3Y93_05875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C3Y93_05875 PF00361 Proton-conducting membrane transporter C3Y93_05880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C3Y93_05885 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C3Y93_05890 PF12838 4Fe-4S dicluster domain C3Y93_05895 PF00146 NADH dehydrogenase C3Y93_05900 PF00384 Molybdopterin oxidoreductase C3Y93_05900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C3Y93_05900 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C3Y93_05905 PF10531 SLBB domain C3Y93_05905 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C3Y93_05905 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C3Y93_05915 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C3Y93_05915 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C3Y93_05920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C3Y93_05925 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C3Y93_05935 PF00348 Polyprenyl synthetase C3Y93_05940 PF04303 PrpF protein C3Y93_05945 PF00324 Amino acid permease C3Y93_05950 PF08402 TOBE domain C3Y93_05950 PF00005 ABC transporter C3Y93_05980 PF01507 Phosphoadenosine phosphosulfate reductase family C3Y93_05985 PF06974 Protein of unknown function (DUF1298) C3Y93_05985 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain C3Y93_05990 PF00575 S1 RNA binding domain C3Y93_05990 PF10150 Ribonuclease E/G family C3Y93_05995 PF02545 Maf-like protein C3Y93_06000 PF04093 rod shape-determining protein MreD C3Y93_06005 PF04085 rod shape-determining protein MreC C3Y93_06015 PF02686 Glu-tRNAGln amidotransferase C subunit C3Y93_06020 PF01425 Amidase C3Y93_06025 PF02934 GatB/GatE catalytic domain C3Y93_06025 PF02637 GatB domain C3Y93_06045 PF05992 SbmA/BacA-like family C3Y93_06060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3Y93_06060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3Y93_06075 PF13533 Biotin-lipoyl like C3Y93_06085 PF00005 ABC transporter C3Y93_06085 PF12704 MacB-like periplasmic core domain C3Y93_06085 PF02687 FtsX-like permease family C3Y93_06095 PF06414 Zeta toxin C3Y93_06105 PF01925 Sulfite exporter TauE/SafE C3Y93_06110 PF00753 Metallo-beta-lactamase superfamily C3Y93_06115 PF13185 GAF domain C3Y93_06115 PF02954 Bacterial regulatory protein, Fis family C3Y93_06115 PF00158 Sigma-54 interaction domain C3Y93_06130 PF00501 AMP-binding enzyme C3Y93_06140 PF03061 Thioesterase superfamily C3Y93_06145 PF00490 Delta-aminolevulinic acid dehydratase C3Y93_06150 PF01266 FAD dependent oxidoreductase C3Y93_06155 PF08338 Domain of unknown function (DUF1731) C3Y93_06155 PF01370 NAD dependent epimerase/dehydratase family C3Y93_06165 PF00149 Calcineurin-like phosphoesterase C3Y93_06165 PF12320 Type 5 capsule protein repressor C-terminal domain C3Y93_06180 PF01168 Alanine racemase, N-terminal domain C3Y93_06185 PF00437 Type II/IV secretion system protein C3Y93_06190 PF00437 Type II/IV secretion system protein C3Y93_06195 PF01475 Ferric uptake regulator family C3Y93_06200 PF04355 SmpA / OmlA family C3Y93_06205 PF03658 RnfH family Ubiquitin C3Y93_06215 PF01814 Hemerythrin HHE cation binding domain C3Y93_06220 PF13230 Glutamine amidotransferases class-II C3Y93_06230 PF00696 Amino acid kinase family C3Y93_06235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3Y93_06235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3Y93_06235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3Y93_06235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3Y93_06240 PF00692 dUTPase C3Y93_06245 PF00580 UvrD/REP helicase N-terminal domain C3Y93_06245 PF13361 UvrD-like helicase C-terminal domain C3Y93_06250 PF13488 Glycine zipper C3Y93_06250 PF00691 OmpA family C3Y93_06255 PF01553 Acyltransferase C3Y93_06265 PF03775 Septum formation inhibitor MinC, C-terminal domain C3Y93_06270 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C3Y93_06275 PF03776 Septum formation topological specificity factor MinE C3Y93_06285 PF01580 FtsK/SpoIIIE family C3Y93_06285 PF09397 Ftsk gamma domain C3Y93_06285 PF17854 FtsK alpha domain C3Y93_06285 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C3Y93_06290 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3Y93_06295 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C3Y93_06300 PF04376 Arginine-tRNA-protein transferase, N terminus C3Y93_06300 PF04377 Arginine-tRNA-protein transferase, C terminus C3Y93_06305 PF00583 Acetyltransferase (GNAT) family C3Y93_06315 PF03143 Elongation factor Tu C-terminal domain C3Y93_06315 PF00009 Elongation factor Tu GTP binding domain C3Y93_06315 PF03144 Elongation factor Tu domain 2 C3Y93_06320 PF00679 Elongation factor G C-terminus C3Y93_06320 PF03144 Elongation factor Tu domain 2 C3Y93_06320 PF14492 Elongation Factor G, domain II C3Y93_06320 PF03764 Elongation factor G, domain IV C3Y93_06320 PF00009 Elongation factor Tu GTP binding domain C3Y93_06325 PF00177 Ribosomal protein S7p/S5e C3Y93_06330 PF00164 Ribosomal protein S12/S23 C3Y93_06340 PF00109 Beta-ketoacyl synthase, N-terminal domain C3Y93_06340 PF02801 Beta-ketoacyl synthase, C-terminal domain C3Y93_06355 PF13419 Haloacid dehalogenase-like hydrolase C3Y93_06360 PF08543 Phosphomethylpyrimidine kinase C3Y93_06360 PF02581 Thiamine monophosphate synthase C3Y93_06365 PF08378 Nuclease-related domain C3Y93_06370 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C3Y93_06370 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C3Y93_06375 PF00893 Small Multidrug Resistance protein C3Y93_06390 PF07732 Multicopper oxidase C3Y93_06390 PF00394 Multicopper oxidase C3Y93_06390 PF07731 Multicopper oxidase C3Y93_06400 PF00834 Ribulose-phosphate 3 epimerase family C3Y93_06415 PF05987 Bacterial protein of unknown function (DUF898) C3Y93_06420 PF00756 Putative esterase C3Y93_06430 PF04445 Putative SAM-dependent methyltransferase C3Y93_06435 PF02673 Bacitracin resistance protein BacA C3Y93_06440 PF00814 Glycoprotease family C3Y93_06445 PF00132 Bacterial transferase hexapeptide (six repeats) C3Y93_06450 PF00293 NUDIX domain C3Y93_06490 PF00425 chorismate binding enzyme C3Y93_06490 PF04715 Anthranilate synthase component I, N terminal region C3Y93_06495 PF00155 Aminotransferase class I and II C3Y93_06500 PF00815 Histidinol dehydrogenase C3Y93_06505 PF01634 ATP phosphoribosyltransferase C3Y93_06510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C3Y93_06515 PF01722 BolA-like protein C3Y93_06520 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C3Y93_06525 PF04963 Sigma-54 factor, core binding domain C3Y93_06525 PF00309 Sigma-54 factor, Activator interacting domain (AID) C3Y93_06525 PF04552 Sigma-54, DNA binding domain C3Y93_06575 PF00795 Carbon-nitrogen hydrolase C3Y93_06580 PF02566 OsmC-like protein C3Y93_06590 PF00437 Type II/IV secretion system protein C3Y93_06610 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C3Y93_06610 PF01612 3'-5' exonuclease C3Y93_06610 PF00476 DNA polymerase family A C3Y93_06610 PF01367 5'-3' exonuclease, C-terminal SAM fold C3Y93_06615 PF02325 YGGT family C3Y93_06620 PF14748 Pyrroline-5-carboxylate reductase dimerisation C3Y93_06620 PF03807 NADP oxidoreductase coenzyme F420-dependent C3Y93_06625 PF11734 TilS substrate C-terminal domain C3Y93_06625 PF09179 TilS substrate binding domain C3Y93_06625 PF01171 PP-loop family C3Y93_06630 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C3Y93_06635 PF02541 Ppx/GppA phosphatase family C3Y93_06640 PF00085 Thioredoxin C3Y93_06645 PF07497 Rho termination factor, RNA-binding domain C3Y93_06645 PF07498 Rho termination factor, N-terminal domain C3Y93_06645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3Y93_06655 PF00216 Bacterial DNA-binding protein C3Y93_06660 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C3Y93_06660 PF01588 Putative tRNA binding domain C3Y93_06660 PF03147 Ferredoxin-fold anticodon binding domain C3Y93_06660 PF03483 B3/4 domain C3Y93_06660 PF03484 tRNA synthetase B5 domain C3Y93_06665 PF01409 tRNA synthetases class II core domain (F) C3Y93_06665 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C3Y93_06675 PF00453 Ribosomal protein L20 C3Y93_06680 PF01632 Ribosomal protein L35 C3Y93_06690 PF09335 SNARE associated Golgi protein C3Y93_06700 PF00043 Glutathione S-transferase, C-terminal domain C3Y93_06700 PF02798 Glutathione S-transferase, N-terminal domain C3Y93_06705 PF00707 Translation initiation factor IF-3, C-terminal domain C3Y93_06705 PF05198 Translation initiation factor IF-3, N-terminal domain C3Y93_06710 PF02824 TGS domain C3Y93_06710 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3Y93_06710 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3Y93_06710 PF03129 Anticodon binding domain C3Y93_06720 PF01565 FAD binding domain C3Y93_06720 PF04030 D-arabinono-1,4-lactone oxidase C3Y93_06735 PF13193 AMP-binding enzyme C-terminal domain C3Y93_06735 PF00501 AMP-binding enzyme C3Y93_06740 PF04751 Protein of unknown function (DUF615) C3Y93_06745 PF00381 PTS HPr component phosphorylation site C3Y93_06750 PF03668 P-loop ATPase protein family C3Y93_06755 PF02569 Pantoate-beta-alanine ligase C3Y93_06760 PF02548 Ketopantoate hydroxymethyltransferase C3Y93_06765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C3Y93_06770 PF12627 Probable RNA and SrmB- binding site of polymerase A C3Y93_06770 PF12626 Polymerase A arginine-rich C-terminus C3Y93_06770 PF01743 Poly A polymerase head domain C3Y93_06775 PF10531 SLBB domain C3Y93_06780 PF03819 MazG nucleotide pyrophosphohydrolase domain C3Y93_06790 PF01926 50S ribosome-binding GTPase C3Y93_06790 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C3Y93_06795 PF01011 PQQ enzyme repeat C3Y93_06795 PF13360 PQQ-like domain C3Y93_06805 PF13393 Histidyl-tRNA synthetase C3Y93_06805 PF03129 Anticodon binding domain C3Y93_06810 PF04551 GcpE protein C3Y93_06815 PF13464 Domain of unknown function (DUF4115) C3Y93_06825 PF04055 Radical SAM superfamily C3Y93_06830 PF00334 Nucleoside diphosphate kinase C3Y93_06835 PF04384 Iron-sulphur cluster assembly C3Y93_06840 PF01569 PAP2 superfamily C3Y93_06845 PF00534 Glycosyl transferases group 1 C3Y93_06845 PF13439 Glycosyltransferase Family 4 C3Y93_06870 PF01063 Amino-transferase class IV C3Y93_06875 PF03710 Glutamate-ammonia ligase adenylyltransferase C3Y93_06875 PF08335 GlnD PII-uridylyltransferase C3Y93_06895 PF00291 Pyridoxal-phosphate dependent enzyme C3Y93_06900 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C3Y93_06905 PF00593 TonB dependent receptor C3Y93_06905 PF07715 TonB-dependent Receptor Plug Domain C3Y93_06910 PF01923 Cobalamin adenosyltransferase C3Y93_06930 PF04237 YjbR C3Y93_06945 PF00072 Response regulator receiver domain C3Y93_06945 PF00486 Transcriptional regulatory protein, C terminal C3Y93_06950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_06950 PF00672 HAMP domain C3Y93_06950 PF00512 His Kinase A (phospho-acceptor) domain C3Y93_06960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3Y93_06960 PF02770 Acyl-CoA dehydrogenase, middle domain C3Y93_06960 PF12806 Acetyl-CoA dehydrogenase C-terminal like C3Y93_06960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3Y93_06965 PF02770 Acyl-CoA dehydrogenase, middle domain C3Y93_06965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3Y93_06965 PF12806 Acetyl-CoA dehydrogenase C-terminal like C3Y93_06965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3Y93_06970 PF06146 Phosphate-starvation-inducible E C3Y93_06985 PF13091 PLD-like domain C3Y93_06990 PF07715 TonB-dependent Receptor Plug Domain C3Y93_06990 PF00593 TonB dependent receptor C3Y93_07000 PF01336 OB-fold nucleic acid binding domain C3Y93_07000 PF00152 tRNA synthetases class II (D, K and N) C3Y93_07000 PF02938 GAD domain C3Y93_07020 PF13737 Transposase DDE domain C3Y93_07025 PF13737 Transposase DDE domain C3Y93_07035 PF13737 Transposase DDE domain C3Y93_07040 PF00535 Glycosyl transferase family 2 C3Y93_07045 PF00132 Bacterial transferase hexapeptide (six repeats) C3Y93_07050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3Y93_07055 PF00483 Nucleotidyl transferase C3Y93_07060 PF16363 GDP-mannose 4,6 dehydratase C3Y93_07080 PF01522 Polysaccharide deacetylase C3Y93_07100 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C3Y93_07100 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C3Y93_07105 PF10369 Small subunit of acetolactate synthase C3Y93_07110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3Y93_07110 PF00205 Thiamine pyrophosphate enzyme, central domain C3Y93_07110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3Y93_07125 PF08264 Anticodon-binding domain of tRNA C3Y93_07125 PF13603 Leucyl-tRNA synthetase, Domain 2 C3Y93_07125 PF00133 tRNA synthetases class I (I, L, M and V) C3Y93_07125 PF09334 tRNA synthetases class I (M) C3Y93_07140 PF01814 Hemerythrin HHE cation binding domain C3Y93_07145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3Y93_07150 PF12704 MacB-like periplasmic core domain C3Y93_07150 PF00005 ABC transporter C3Y93_07150 PF02687 FtsX-like permease family C3Y93_07155 PF02321 Outer membrane efflux protein C3Y93_07160 PF00072 Response regulator receiver domain C3Y93_07160 PF01627 Hpt domain C3Y93_07160 PF00512 His Kinase A (phospho-acceptor) domain C3Y93_07160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_07160 PF00672 HAMP domain C3Y93_07160 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C3Y93_07165 PF03971 Monomeric isocitrate dehydrogenase C3Y93_07180 PF02547 Queuosine biosynthesis protein C3Y93_07190 PF04011 LemA family C3Y93_07195 PF00360 Phytochrome region C3Y93_07195 PF00990 Diguanylate cyclase, GGDEF domain C3Y93_07195 PF01590 GAF domain C3Y93_07195 PF00563 EAL domain C3Y93_07205 PF01702 Queuine tRNA-ribosyltransferase C3Y93_07210 PF02699 Preprotein translocase subunit C3Y93_07215 PF02355 Protein export membrane protein C3Y93_07215 PF13721 SecD export protein N-terminal TM region C3Y93_07215 PF07549 SecD/SecF GG Motif C3Y93_07220 PF07549 SecD/SecF GG Motif C3Y93_07220 PF02355 Protein export membrane protein C3Y93_07230 PF02824 TGS domain C3Y93_07230 PF13291 ACT domain C3Y93_07230 PF04607 Region found in RelA / SpoT proteins C3Y93_07235 PF05958 tRNA (Uracil-5-)-methyltransferase C3Y93_07245 PF00291 Pyridoxal-phosphate dependent enzyme C3Y93_07250 PF00672 HAMP domain C3Y93_07250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C3Y93_07250 PF00072 Response regulator receiver domain C3Y93_07250 PF01627 Hpt domain C3Y93_07250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_07250 PF00512 His Kinase A (phospho-acceptor) domain C3Y93_07255 PF00378 Enoyl-CoA hydratase/isomerase C3Y93_07260 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C3Y93_07260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C3Y93_07265 PF01261 Xylose isomerase-like TIM barrel C3Y93_07275 PF02233 NAD(P) transhydrogenase beta subunit C3Y93_07280 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C3Y93_07285 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C3Y93_07285 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C3Y93_07300 PF07690 Major Facilitator Superfamily C3Y93_07310 PF01207 Dihydrouridine synthase (Dus) C3Y93_07315 PF00899 ThiF family C3Y93_07320 PF01026 TatD related DNase C3Y93_07335 PF03144 Elongation factor Tu domain 2 C3Y93_07335 PF16658 Class II release factor RF3, C-terminal domain C3Y93_07335 PF00009 Elongation factor Tu GTP binding domain C3Y93_07345 PF03707 Bacterial signalling protein N terminal repeat C3Y93_07345 PF00990 Diguanylate cyclase, GGDEF domain C3Y93_07345 PF00563 EAL domain C3Y93_07350 PF17804 Tail specific protease N-terminal domain C3Y93_07350 PF00595 PDZ domain C3Y93_07350 PF11818 C-terminal domain of tail specific protease (DUF3340) C3Y93_07350 PF03572 Peptidase family S41 C3Y93_07355 PF00933 Glycosyl hydrolase family 3 N terminal domain C3Y93_07370 PF00171 Aldehyde dehydrogenase family C3Y93_07380 PF00871 Acetokinase family C3Y93_07385 PF07085 DRTGG domain C3Y93_07385 PF01515 Phosphate acetyl/butaryl transferase C3Y93_07420 PF13359 DDE superfamily endonuclease C3Y93_07420 PF13613 Helix-turn-helix of DDE superfamily endonuclease C3Y93_07435 PF05681 Fumarate hydratase (Fumerase) C3Y93_07435 PF05683 Fumarase C-terminus C3Y93_07445 PF10431 C-terminal, D2-small domain, of ClpB protein C3Y93_07445 PF07724 AAA domain (Cdc48 subfamily) C3Y93_07445 PF06689 ClpX C4-type zinc finger C3Y93_07450 PF00574 Clp protease C3Y93_07455 PF05698 Bacterial trigger factor protein (TF) C-terminus C3Y93_07455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3Y93_07455 PF05697 Bacterial trigger factor protein (TF) C3Y93_07460 PF07715 TonB-dependent Receptor Plug Domain C3Y93_07460 PF00593 TonB dependent receptor C3Y93_07465 PF00593 TonB dependent receptor C3Y93_07465 PF07715 TonB-dependent Receptor Plug Domain C3Y93_07470 PF13640 2OG-Fe(II) oxygenase superfamily C3Y93_07470 PF18331 PKHD-type hydroxylase C-terminal domain C3Y93_07475 PF01070 FMN-dependent dehydrogenase C3Y93_07480 PF00682 HMGL-like C3Y93_07480 PF08502 LeuA allosteric (dimerisation) domain C3Y93_07485 PF00561 alpha/beta hydrolase fold C3Y93_07490 PF00561 alpha/beta hydrolase fold C3Y93_07490 PF07021 Methionine biosynthesis protein MetW C3Y93_07505 PF01725 Ham1 family C3Y93_07510 PF02416 mttA/Hcf106 family C3Y93_07515 PF02416 mttA/Hcf106 family C3Y93_07520 PF00902 Sec-independent protein translocase protein (TatC) C3Y93_07535 PF01790 Prolipoprotein diacylglyceryl transferase C3Y93_07545 PF00303 Thymidylate synthase C3Y93_07550 PF00186 Dihydrofolate reductase C3Y93_07565 PF01625 Peptide methionine sulfoxide reductase C3Y93_07570 PF01557 Fumarylacetoacetate (FAA) hydrolase family C3Y93_07600 PF08206 Ribonuclease B OB domain C3Y93_07600 PF17876 Cold shock domain C3Y93_07600 PF08461 Ribonuclease R winged-helix domain C3Y93_07600 PF00773 RNB domain C3Y93_07600 PF00575 S1 RNA binding domain C3Y93_07605 PF01432 Peptidase family M3 C3Y93_07610 PF09526 Probable metal-binding protein (DUF2387) C3Y93_07645 PF03937 Flavinator of succinate dehydrogenase C3Y93_07650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3Y93_07650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3Y93_07650 PF02770 Acyl-CoA dehydrogenase, middle domain C3Y93_07655 PF00743 Flavin-binding monooxygenase-like C3Y93_07660 PF01196 Ribosomal protein L17 C3Y93_07665 PF01000 RNA polymerase Rpb3/RpoA insert domain C3Y93_07665 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C3Y93_07665 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C3Y93_07670 PF01479 S4 domain C3Y93_07670 PF00163 Ribosomal protein S4/S9 N-terminal domain C3Y93_07675 PF00411 Ribosomal protein S11 C3Y93_07680 PF00416 Ribosomal protein S13/S18 C3Y93_07685 PF00444 Ribosomal protein L36 C3Y93_07690 PF00344 SecY translocase C3Y93_07695 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C3Y93_07700 PF00327 Ribosomal protein L30p/L7e C3Y93_07705 PF03719 Ribosomal protein S5, C-terminal domain C3Y93_07705 PF00333 Ribosomal protein S5, N-terminal domain C3Y93_07710 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C3Y93_07715 PF00347 Ribosomal protein L6 C3Y93_07720 PF00410 Ribosomal protein S8 C3Y93_07725 PF00253 Ribosomal protein S14p/S29e C3Y93_07730 PF00673 ribosomal L5P family C-terminus C3Y93_07730 PF00281 Ribosomal protein L5 C3Y93_07735 PF00467 KOW motif C3Y93_07735 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C3Y93_07740 PF00238 Ribosomal protein L14p/L23e C3Y93_07745 PF00366 Ribosomal protein S17 C3Y93_07750 PF00831 Ribosomal L29 protein C3Y93_07755 PF00252 Ribosomal protein L16p/L10e C3Y93_07760 PF00189 Ribosomal protein S3, C-terminal domain C3Y93_07760 PF07650 KH domain C3Y93_07765 PF00237 Ribosomal protein L22p/L17e C3Y93_07770 PF00203 Ribosomal protein S19 C3Y93_07775 PF03947 Ribosomal Proteins L2, C-terminal domain C3Y93_07775 PF00181 Ribosomal Proteins L2, RNA binding domain C3Y93_07780 PF00276 Ribosomal protein L23 C3Y93_07785 PF00573 Ribosomal protein L4/L1 family C3Y93_07790 PF00297 Ribosomal protein L3 C3Y93_07795 PF00338 Ribosomal protein S10p/S20e C3Y93_07800 PF00117 Glutamine amidotransferase class-I C3Y93_07805 PF01053 Cys/Met metabolism PLP-dependent enzyme C3Y93_07810 PF05872 Bacterial protein of unknown function (DUF853) C3Y93_07815 PF00970 Oxidoreductase FAD-binding domain C3Y93_07815 PF00042 Globin C3Y93_07815 PF00175 Oxidoreductase NAD-binding domain C3Y93_07820 PF02082 Transcriptional regulator C3Y93_07825 PF01926 50S ribosome-binding GTPase C3Y93_07835 PF00375 Sodium:dicarboxylate symporter family C3Y93_07845 PF01553 Acyltransferase C3Y93_07855 PF00270 DEAD/DEAH box helicase C3Y93_07855 PF17191 RecG wedge domain C3Y93_07855 PF00271 Helicase conserved C-terminal domain C3Y93_07860 PF00156 Phosphoribosyl transferase domain C3Y93_07870 PF03641 Possible lysine decarboxylase C3Y93_07875 PF01544 CorA-like Mg2+ transporter protein C3Y93_07885 PF05494 MlaC protein C3Y93_07890 PF02470 MlaD protein C3Y93_07895 PF02405 Permease MlaE C3Y93_07900 PF00005 ABC transporter C3Y93_07905 PF00271 Helicase conserved C-terminal domain C3Y93_07905 PF00270 DEAD/DEAH box helicase C3Y93_07910 PF00459 Inositol monophosphatase family C3Y93_07915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C3Y93_07915 PF02779 Transketolase, pyrimidine binding domain C3Y93_07915 PF02780 Transketolase, C-terminal domain C3Y93_07920 PF00925 GTP cyclohydrolase II C3Y93_07925 PF06969 HemN C-terminal domain C3Y93_07925 PF04055 Radical SAM superfamily C3Y93_07940 PF01488 Shikimate / quinate 5-dehydrogenase C3Y93_07940 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C3Y93_07940 PF08501 Shikimate dehydrogenase substrate binding domain C3Y93_07950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3Y93_07950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3Y93_07950 PF12806 Acetyl-CoA dehydrogenase C-terminal like C3Y93_07950 PF02770 Acyl-CoA dehydrogenase, middle domain C3Y93_07955 PF06969 HemN C-terminal domain C3Y93_07955 PF04055 Radical SAM superfamily C3Y93_07965 PF01554 MatE C3Y93_07970 PF03109 ABC1 family C3Y93_07985 PF01197 Ribosomal protein L31 C3Y93_07990 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C3Y93_08010 PF01209 ubiE/COQ5 methyltransferase family C3Y93_08020 PF13614 AAA domain C3Y93_08025 PF01594 AI-2E family transporter C3Y93_08030 PF00080 Copper/zinc superoxide dismutase (SODC) C3Y93_08035 PF12823 Domain of unknown function (DUF3817) C3Y93_08040 PF07690 Major Facilitator Superfamily C3Y93_08050 PF02913 FAD linked oxidases, C-terminal domain C3Y93_08050 PF01565 FAD binding domain C3Y93_08055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3Y93_08055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3Y93_08060 PF00892 EamA-like transporter family C3Y93_08070 PF09157 Pseudouridine synthase II TruB, C-terminal C3Y93_08070 PF01509 TruB family pseudouridylate synthase (N terminal domain) C3Y93_08070 PF16198 tRNA pseudouridylate synthase B C-terminal domain C3Y93_08075 PF03280 Proteobacterial lipase chaperone protein C3Y93_08080 PF00561 alpha/beta hydrolase fold C3Y93_08085 PF00561 alpha/beta hydrolase fold C3Y93_08090 PF01245 Ribosomal protein L19 C3Y93_08095 PF01746 tRNA (Guanine-1)-methyltransferase C3Y93_08100 PF01782 RimM N-terminal domain C3Y93_08100 PF05239 PRC-barrel domain C3Y93_08105 PF00886 Ribosomal protein S16 C3Y93_08120 PF05567 Neisseria PilC beta-propeller domain C3Y93_08145 PF02401 LytB protein C3Y93_08150 PF00625 Guanylate kinase C3Y93_08155 PF01192 RNA polymerase Rpb6 C3Y93_08160 PF02824 TGS domain C3Y93_08160 PF13291 ACT domain C3Y93_08160 PF04607 Region found in RelA / SpoT proteins C3Y93_08165 PF01042 Endoribonuclease L-PSP C3Y93_08170 PF04324 BFD-like [2Fe-2S] binding domain C3Y93_08175 PF00210 Ferritin-like domain C3Y93_08185 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH C3Y93_08190 PF11846 Virulence factor membrane-bound polymerase, C-terminal C3Y93_08190 PF04932 O-Antigen ligase C3Y93_08190 PF15864 Protein glycosylation ligase C3Y93_08220 PF07963 Prokaryotic N-terminal methylation motif C3Y93_08220 PF00114 Pilin (bacterial filament) C3Y93_08230 PF04536 TPM domain C3Y93_08235 PF04011 LemA family C3Y93_08240 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3Y93_08240 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C3Y93_08245 PF00310 Glutamine amidotransferases class-II C3Y93_08245 PF04898 Glutamate synthase central domain C3Y93_08245 PF01645 Conserved region in glutamate synthase C3Y93_08245 PF01493 GXGXG motif C3Y93_08260 PF01761 3-dehydroquinate synthase C3Y93_08265 PF01202 Shikimate kinase C3Y93_08270 PF11741 AMIN domain C3Y93_08270 PF00263 Bacterial type II and III secretion system protein C3Y93_08270 PF03958 Bacterial type II/III secretion system short domain C3Y93_08270 PF07660 Secretin and TonB N terminus short domain C3Y93_08295 PF00905 Penicillin binding protein transpeptidase domain C3Y93_08295 PF00912 Transglycosylase C3Y93_08295 PF17092 Penicillin-binding protein OB-like domain C3Y93_08300 PF13847 Methyltransferase domain C3Y93_08305 PF00953 Glycosyl transferase family 4 C3Y93_08310 PF08245 Mur ligase middle domain C3Y93_08310 PF01225 Mur ligase family, catalytic domain C3Y93_08310 PF02875 Mur ligase family, glutamate ligase domain C3Y93_08315 PF01225 Mur ligase family, catalytic domain C3Y93_08315 PF02875 Mur ligase family, glutamate ligase domain C3Y93_08315 PF08245 Mur ligase middle domain C3Y93_08320 PF00905 Penicillin binding protein transpeptidase domain C3Y93_08320 PF03717 Penicillin-binding Protein dimerisation domain C3Y93_08330 PF01795 MraW methylase family C3Y93_08345 PF00749 tRNA synthetases class I (E and Q), catalytic domain C3Y93_08365 PF00005 ABC transporter C3Y93_08365 PF12848 ABC transporter C3Y93_08370 PF01053 Cys/Met metabolism PLP-dependent enzyme C3Y93_08375 PF00106 short chain dehydrogenase C3Y93_08390 PF00575 S1 RNA binding domain C3Y93_08390 PF16921 Tex protein YqgF-like domain C3Y93_08390 PF09371 Tex-like protein N-terminal domain C3Y93_08390 PF17674 HHH domain C3Y93_08395 PF00486 Transcriptional regulatory protein, C terminal C3Y93_08395 PF00072 Response regulator receiver domain C3Y93_08400 PF00672 HAMP domain C3Y93_08400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_08400 PF00512 His Kinase A (phospho-acceptor) domain C3Y93_08405 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C3Y93_08405 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C3Y93_08435 PF00475 Imidazoleglycerol-phosphate dehydratase C3Y93_08440 PF00117 Glutamine amidotransferase class-I C3Y93_08455 PF00977 Histidine biosynthesis protein C3Y93_08460 PF00892 EamA-like transporter family C3Y93_08475 PF01636 Phosphotransferase enzyme family C3Y93_08480 PF00977 Histidine biosynthesis protein C3Y93_08500 PF00230 Major intrinsic protein C3Y93_08520 PF02705 K+ potassium transporter C3Y93_08530 PF00072 Response regulator receiver domain C3Y93_08530 PF00196 Bacterial regulatory proteins, luxR family C3Y93_08540 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C3Y93_08540 PF00925 GTP cyclohydrolase II C3Y93_08545 PF00885 6,7-dimethyl-8-ribityllumazine synthase C3Y93_08550 PF01029 NusB family C3Y93_08555 PF02769 AIR synthase related protein, C-terminal domain C3Y93_08555 PF00586 AIR synthase related protein, N-terminal domain C3Y93_08560 PF04608 Phosphatidylglycerophosphatase A C3Y93_08565 PF00132 Bacterial transferase hexapeptide (six repeats) C3Y93_08565 PF14602 Hexapeptide repeat of succinyl-transferase C3Y93_08565 PF12804 MobA-like NTP transferase domain C3Y93_08570 PF01380 SIS domain C3Y93_08580 PF13443 Cro/C1-type HTH DNA-binding domain C3Y93_08590 PF00589 Phage integrase family C3Y93_08590 PF14659 Phage integrase, N-terminal SAM-like domain C3Y93_08670 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C3Y93_08670 PF00355 Rieske [2Fe-2S] domain C3Y93_08675 PF00866 Ring hydroxylating beta subunit C3Y93_08680 PF00175 Oxidoreductase NAD-binding domain C3Y93_08680 PF00970 Oxidoreductase FAD-binding domain C3Y93_08680 PF00111 2Fe-2S iron-sulfur cluster binding domain C3Y93_08685 PF04444 Catechol dioxygenase N terminus C3Y93_08685 PF00775 Dioxygenase C3Y93_08695 PF13737 Transposase DDE domain C3Y93_08700 PF14525 AraC-binding-like domain C3Y93_08700 PF12833 Helix-turn-helix domain C3Y93_08705 PF07690 Major Facilitator Superfamily C3Y93_08710 PF12706 Beta-lactamase superfamily domain C3Y93_08720 PF02656 Domain of unknown function (DUF202) C3Y93_08735 PF00665 Integrase core domain C3Y93_08735 PF13936 Helix-turn-helix domain C3Y93_08750 PF00239 Resolvase, N terminal domain C3Y93_08750 PF02796 Helix-turn-helix domain of resolvase C3Y93_08755 PF07690 Major Facilitator Superfamily C3Y93_08760 PF02909 Tetracyclin repressor-like, C-terminal domain C3Y93_08760 PF00440 Bacterial regulatory proteins, tetR family C3Y93_08780 PF01381 Helix-turn-helix C3Y93_08785 PF05973 Phage derived protein Gp49-like (DUF891) C3Y93_08800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_08800 PF03466 LysR substrate binding domain C3Y93_08805 PF07690 Major Facilitator Superfamily C3Y93_08810 PF04444 Catechol dioxygenase N terminus C3Y93_08810 PF00775 Dioxygenase C3Y93_08815 PF01494 FAD binding domain C3Y93_08820 PF03466 LysR substrate binding domain C3Y93_08820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_08825 PF00171 Aldehyde dehydrogenase family C3Y93_08830 PF00107 Zinc-binding dehydrogenase C3Y93_08830 PF08240 Alcohol dehydrogenase GroES-like domain C3Y93_08840 PF13610 DDE domain C3Y93_08845 PF02796 Helix-turn-helix domain of resolvase C3Y93_08845 PF00239 Resolvase, N terminal domain C3Y93_08865 PF00905 Penicillin binding protein transpeptidase domain C3Y93_08875 PF13610 DDE domain C3Y93_08880 PF01636 Phosphotransferase enzyme family C3Y93_08885 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase C3Y93_08895 PF18790 KfrB protein C3Y93_08905 PF13610 DDE domain C3Y93_08920 PF00809 Pterin binding enzyme C3Y93_08925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3Y93_08925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3Y93_08925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3Y93_08925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3Y93_08940 PF00665 Integrase core domain C3Y93_08940 PF02796 Helix-turn-helix domain of resolvase C3Y93_08945 PF01695 IstB-like ATP binding protein C3Y93_08955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_08955 PF03466 LysR substrate binding domain C3Y93_08960 PF07690 Major Facilitator Superfamily C3Y93_08975 PF13610 DDE domain C3Y93_09005 PF03350 Uncharacterized protein family, UPF0114 C3Y93_09015 PF01699 Sodium/calcium exchanger protein C3Y93_09020 PF13610 DDE domain C3Y93_09025 PF01545 Cation efflux family C3Y93_09030 PF13411 MerR HTH family regulatory protein C3Y93_09045 PF05973 Phage derived protein Gp49-like (DUF891) C3Y93_09065 PF04221 RelB antitoxin C3Y93_09080 PF07732 Multicopper oxidase C3Y93_09080 PF00394 Multicopper oxidase C3Y93_09080 PF07731 Multicopper oxidase C3Y93_09090 PF13610 DDE domain C3Y93_09110 PF16177 Acetyl-coenzyme A synthetase N-terminus C3Y93_09110 PF13193 AMP-binding enzyme C-terminal domain C3Y93_09110 PF00501 AMP-binding enzyme C3Y93_09115 PF00924 Mechanosensitive ion channel C3Y93_09115 PF05552 Conserved TM helix C3Y93_09125 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C3Y93_09130 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3Y93_09150 PF02272 DHHA1 domain C3Y93_09150 PF17768 RecJ OB domain C3Y93_09150 PF01368 DHH family C3Y93_09155 PF01243 Pyridoxamine 5'-phosphate oxidase C3Y93_09155 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C3Y93_09160 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3Y93_09160 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3Y93_09160 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3Y93_09160 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3Y93_09165 PF00571 CBS domain C3Y93_09165 PF00478 IMP dehydrogenase / GMP reductase domain C3Y93_09170 PF03692 Putative zinc- or iron-chelating domain C3Y93_09175 PF00258 Flavodoxin C3Y93_09175 PF01613 Flavin reductase like domain C3Y93_09180 PF01169 Uncharacterized protein family UPF0016 C3Y93_09185 PF00364 Biotin-requiring enzyme C3Y93_09185 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3Y93_09185 PF02817 e3 binding domain C3Y93_09190 PF17831 Pyruvate dehydrogenase E1 component middle domain C3Y93_09190 PF00456 Transketolase, thiamine diphosphate binding domain C3Y93_09205 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C3Y93_09210 PF12327 FtsZ family, C-terminal domain C3Y93_09210 PF00091 Tubulin/FtsZ family, GTPase domain C3Y93_09215 PF02491 SHS2 domain inserted in FTSA C3Y93_09220 PF08478 POTRA domain, FtsQ-type C3Y93_09220 PF03799 Cell division protein FtsQ C3Y93_09225 PF07478 D-ala D-ala ligase C-terminus C3Y93_09225 PF01820 D-ala D-ala ligase N-terminus C3Y93_09230 PF02875 Mur ligase family, glutamate ligase domain C3Y93_09230 PF08245 Mur ligase middle domain C3Y93_09230 PF01225 Mur ligase family, catalytic domain C3Y93_09235 PF03033 Glycosyltransferase family 28 N-terminal domain C3Y93_09235 PF04101 Glycosyltransferase family 28 C-terminal domain C3Y93_09240 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C3Y93_09240 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C3Y93_09265 PF00156 Phosphoribosyl transferase domain C3Y93_09270 PF03372 Endonuclease/Exonuclease/phosphatase family C3Y93_09275 PF03960 ArsC family C3Y93_09285 PF07859 alpha/beta hydrolase fold C3Y93_09290 PF02525 Flavodoxin-like fold C3Y93_09295 PF13417 Glutathione S-transferase, N-terminal domain C3Y93_09295 PF00043 Glutathione S-transferase, C-terminal domain C3Y93_09300 PF11412 Disulphide bond corrector protein DsbC C3Y93_09300 PF02683 Cytochrome C biogenesis protein transmembrane region C3Y93_09330 PF00939 Sodium:sulfate symporter transmembrane region C3Y93_09340 PF01751 Toprim domain C3Y93_09340 PF00204 DNA gyrase B C3Y93_09340 PF00986 DNA gyrase B subunit, carboxyl terminus C3Y93_09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_09345 PF05728 Uncharacterised protein family (UPF0227) C3Y93_09355 PF02600 Disulfide bond formation protein DsbB C3Y93_09360 PF04262 Glutamate-cysteine ligase C3Y93_09375 PF04286 Protein of unknown function (DUF445) C3Y93_09400 PF00665 Integrase core domain C3Y93_09400 PF13936 Helix-turn-helix domain C3Y93_09405 PF00155 Aminotransferase class I and II C3Y93_09410 PF01554 MatE C3Y93_09415 PF00106 short chain dehydrogenase C3Y93_09425 PF00486 Transcriptional regulatory protein, C terminal C3Y93_09425 PF00072 Response regulator receiver domain C3Y93_09430 PF11808 Phosphate regulon sensor protein PhoR C3Y93_09430 PF00989 PAS fold C3Y93_09430 PF00512 His Kinase A (phospho-acceptor) domain C3Y93_09430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_09440 PF02666 Phosphatidylserine decarboxylase C3Y93_09445 PF00581 Rhodanese-like domain C3Y93_09450 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C3Y93_09450 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C3Y93_09455 PF02580 D-Tyr-tRNA(Tyr) deacylase C3Y93_09480 PF02503 Polyphosphate kinase middle domain C3Y93_09480 PF13089 Polyphosphate kinase N-terminal domain C3Y93_09480 PF13090 Polyphosphate kinase C-terminal domain 2 C3Y93_09480 PF17941 Polyphosphate kinase C-terminal domain 1 C3Y93_09485 PF00857 Isochorismatase family C3Y93_09495 PF07690 Major Facilitator Superfamily C3Y93_09500 PF00701 Dihydrodipicolinate synthetase family C3Y93_09510 PF01259 SAICAR synthetase C3Y93_09515 PF00313 'Cold-shock' DNA-binding domain C3Y93_09520 PF12002 MgsA AAA+ ATPase C terminal C3Y93_09520 PF16193 AAA C-terminal domain C3Y93_09520 PF00004 ATPase family associated with various cellular activities (AAA) C3Y93_09525 PF03692 Putative zinc- or iron-chelating domain C3Y93_09530 PF07043 Protein of unknown function (DUF1328) C3Y93_09545 PF10576 Iron-sulfur binding domain of endonuclease III C3Y93_09545 PF00633 Helix-hairpin-helix motif C3Y93_09545 PF00730 HhH-GPD superfamily base excision DNA repair protein C3Y93_09545 PF14815 NUDIX domain C3Y93_09560 PF03352 Methyladenine glycosylase C3Y93_09565 PF00107 Zinc-binding dehydrogenase C3Y93_09565 PF08240 Alcohol dehydrogenase GroES-like domain C3Y93_09570 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C3Y93_09570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3Y93_09575 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C3Y93_09575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3Y93_09580 PF03023 Lipid II flippase MurJ C3Y93_09585 PF01510 N-acetylmuramoyl-L-alanine amidase C3Y93_09590 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C3Y93_09590 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C3Y93_09600 PF01138 3' exoribonuclease family, domain 1 C3Y93_09600 PF03725 3' exoribonuclease family, domain 2 C3Y93_09605 PF00440 Bacterial regulatory proteins, tetR family C3Y93_09610 PF01323 DSBA-like thioredoxin domain C3Y93_09620 PF13419 Haloacid dehalogenase-like hydrolase C3Y93_09625 PF00106 short chain dehydrogenase C3Y93_09645 PF00696 Amino acid kinase family C3Y93_09645 PF00583 Acetyltransferase (GNAT) family C3Y93_09650 PF00440 Bacterial regulatory proteins, tetR family C3Y93_09650 PF08362 YcdC-like protein, C-terminal region C3Y93_09660 PF06574 FAD synthetase C3Y93_09660 PF01687 Riboflavin kinase C3Y93_09665 PF08264 Anticodon-binding domain of tRNA C3Y93_09665 PF00133 tRNA synthetases class I (I, L, M and V) C3Y93_09665 PF06827 Zinc finger found in FPG and IleRS C3Y93_09670 PF01252 Signal peptidase (SPase) II C3Y93_09675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3Y93_09680 PF07995 Glucose / Sorbosone dehydrogenase C3Y93_09685 PF07690 Major Facilitator Superfamily C3Y93_09715 PF00579 tRNA synthetases class I (W and Y) C3Y93_09720 PF03702 Anhydro-N-acetylmuramic acid kinase C3Y93_09725 PF01521 Iron-sulphur cluster biosynthesis C3Y93_09740 PF00005 ABC transporter C3Y93_09740 PF12848 ABC transporter C3Y93_09750 PF01751 Toprim domain C3Y93_09750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_09750 PF00204 DNA gyrase B C3Y93_09750 PF00986 DNA gyrase B subunit, carboxyl terminus C3Y93_09750 PF18053 DNA gyrase B subunit insert domain C3Y93_09755 PF02463 RecF/RecN/SMC N terminal domain C3Y93_09760 PF02768 DNA polymerase III beta subunit, C-terminal domain C3Y93_09760 PF00712 DNA polymerase III beta subunit, N-terminal domain C3Y93_09760 PF02767 DNA polymerase III beta subunit, central domain C3Y93_09765 PF00308 Bacterial dnaA protein C3Y93_09765 PF11638 DnaA N-terminal domain C3Y93_09765 PF08299 Bacterial dnaA protein helix-turn-helix C3Y93_09770 PF00468 Ribosomal protein L34 C3Y93_09775 PF00825 Ribonuclease P C3Y93_09780 PF01809 Putative membrane protein insertion efficiency factor C3Y93_09785 PF02096 60Kd inner membrane protein C3Y93_09785 PF14849 YidC periplasmic domain C3Y93_09790 PF12631 MnmE helical domain C3Y93_09790 PF01926 50S ribosome-binding GTPase C3Y93_09790 PF10396 GTP-binding protein TrmE N-terminus C3Y93_09805 PF02583 Metal-sensitive transcriptional repressor C3Y93_09810 PF01545 Cation efflux family C3Y93_09815 PF10411 Disulfide bond isomerase protein N-terminus C3Y93_09815 PF13098 Thioredoxin-like domain C3Y93_09825 PF00156 Phosphoribosyl transferase domain C3Y93_09830 PF01979 Amidohydrolase family C3Y93_09835 PF03741 Integral membrane protein TerC family C3Y93_09850 PF04940 Sensors of blue-light using FAD C3Y93_09850 PF00563 EAL domain C3Y93_09855 PF00107 Zinc-binding dehydrogenase C3Y93_09855 PF08240 Alcohol dehydrogenase GroES-like domain C3Y93_09860 PF02875 Mur ligase family, glutamate ligase domain C3Y93_09860 PF01225 Mur ligase family, catalytic domain C3Y93_09860 PF08245 Mur ligase middle domain C3Y93_09870 PF00731 AIR carboxylase C3Y93_09875 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C3Y93_09875 PF02222 ATP-grasp domain C3Y93_09880 PF13406 Transglycosylase SLT domain C3Y93_09895 PF00012 Hsp70 protein C3Y93_09900 PF01025 GrpE C3Y93_09910 PF07859 alpha/beta hydrolase fold C3Y93_09920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C3Y93_09955 PF00171 Aldehyde dehydrogenase family C3Y93_09960 PF00209 Sodium:neurotransmitter symporter family C3Y93_09970 PF01029 NusB family C3Y93_09970 PF01189 16S rRNA methyltransferase RsmB/F C3Y93_09975 PF02911 Formyl transferase, C-terminal domain C3Y93_09975 PF00551 Formyl transferase C3Y93_09980 PF00920 Dehydratase family C3Y93_09985 PF00920 Dehydratase family C3Y93_10015 PF00860 Permease family C3Y93_10020 PF00072 Response regulator receiver domain C3Y93_10020 PF00990 Diguanylate cyclase, GGDEF domain C3Y93_10025 PF00311 Phosphoenolpyruvate carboxylase C3Y93_10030 PF00440 Bacterial regulatory proteins, tetR family C3Y93_10040 PF00873 AcrB/AcrD/AcrF family C3Y93_10050 PF01556 DnaJ C terminal domain C3Y93_10050 PF00226 DnaJ domain C3Y93_10050 PF00684 DnaJ central domain C3Y93_10075 PF01348 Type II intron maturase C3Y93_10075 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C3Y93_10090 PF04138 GtrA-like protein C3Y93_10095 PF00535 Glycosyl transferase family 2 C3Y93_10125 PF13737 Transposase DDE domain C3Y93_10130 PF05173 Dihydrodipicolinate reductase, C-terminus C3Y93_10130 PF01113 Dihydrodipicolinate reductase, N-terminus C3Y93_10140 PF14052 Capsule assembly protein Wzi C3Y93_10145 PF13614 AAA domain C3Y93_10145 PF13807 G-rich domain on putative tyrosine kinase C3Y93_10145 PF02706 Chain length determinant protein C3Y93_10150 PF01451 Low molecular weight phosphotyrosine protein phosphatase C3Y93_10155 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C3Y93_10155 PF02563 Polysaccharide biosynthesis/export protein C3Y93_10155 PF10531 SLBB domain C3Y93_10165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C3Y93_10165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C3Y93_10165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C3Y93_10170 PF01370 NAD dependent epimerase/dehydratase family C3Y93_10175 PF00005 ABC transporter C3Y93_10175 PF00664 ABC transporter transmembrane region C3Y93_10180 PF02719 Polysaccharide biosynthesis protein C3Y93_10185 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3Y93_10190 PF02348 Cytidylyltransferase C3Y93_10195 PF03033 Glycosyltransferase family 28 N-terminal domain C3Y93_10195 PF04101 Glycosyltransferase family 28 C-terminal domain C3Y93_10205 PF03102 NeuB family C3Y93_10205 PF08666 SAF domain C3Y93_10215 PF00535 Glycosyl transferase family 2 C3Y93_10230 PF00534 Glycosyl transferases group 1 C3Y93_10230 PF13439 Glycosyltransferase Family 4 C3Y93_10240 PF13477 Glycosyl transferase 4-like C3Y93_10240 PF00534 Glycosyl transferases group 1 C3Y93_10245 PF02397 Bacterial sugar transferase C3Y93_10250 PF00132 Bacterial transferase hexapeptide (six repeats) C3Y93_10250 PF14602 Hexapeptide repeat of succinyl-transferase C3Y93_10250 PF17836 PglD N-terminal domain C3Y93_10255 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3Y93_10260 PF02719 Polysaccharide biosynthesis protein C3Y93_10265 PF00483 Nucleotidyl transferase C3Y93_10270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C3Y93_10270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C3Y93_10270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C3Y93_10275 PF00342 Phosphoglucose isomerase C3Y93_10280 PF16363 GDP-mannose 4,6 dehydratase C3Y93_10285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3Y93_10285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3Y93_10285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3Y93_10285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3Y93_10305 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system C3Y93_10315 PF00271 Helicase conserved C-terminal domain C3Y93_10315 PF12419 SNF2 Helicase protein C3Y93_10315 PF00176 SNF2 family N-terminal domain C3Y93_10330 PF01722 BolA-like protein C3Y93_10335 PF04247 Invasion gene expression up-regulator, SirB C3Y93_10340 PF13614 AAA domain C3Y93_10355 PF09335 SNARE associated Golgi protein C3Y93_10360 PF07681 DoxX C3Y93_10365 PF02540 NAD synthase C3Y93_10365 PF00117 Glutamine amidotransferase class-I C3Y93_10365 PF00958 GMP synthase C terminal domain C3Y93_10370 PF00990 Diguanylate cyclase, GGDEF domain C3Y93_10370 PF00072 Response regulator receiver domain C3Y93_10375 PF02678 Pirin C3Y93_10375 PF05726 Pirin C-terminal cupin domain C3Y93_10395 PF03485 Arginyl tRNA synthetase N terminal domain C3Y93_10395 PF05746 DALR anticodon binding domain C3Y93_10395 PF00750 tRNA synthetases class I (R) C3Y93_10405 PF00390 Malic enzyme, N-terminal domain C3Y93_10405 PF03949 Malic enzyme, NAD binding domain C3Y93_10415 PF00072 Response regulator receiver domain C3Y93_10415 PF09456 RcsC Alpha-Beta-Loop (ABL) C3Y93_10415 PF00512 His Kinase A (phospho-acceptor) domain C3Y93_10415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_10420 PF04341 Protein of unknown function, DUF485 C3Y93_10425 PF00474 Sodium:solute symporter family C3Y93_10440 PF00990 Diguanylate cyclase, GGDEF domain C3Y93_10445 PF17755 UvrA DNA-binding domain C3Y93_10445 PF17760 UvrA interaction domain C3Y93_10450 PF02581 Thiamine monophosphate synthase C3Y93_10450 PF08543 Phosphomethylpyrimidine kinase C3Y93_10450 PF03070 TENA/THI-4/PQQC family C3Y93_10460 PF07690 Major Facilitator Superfamily C3Y93_10465 PF00436 Single-strand binding protein family C3Y93_10470 PF00578 AhpC/TSA family C3Y93_10470 PF10417 C-terminal domain of 1-Cys peroxiredoxin C3Y93_10480 PF01593 Flavin containing amine oxidoreductase C3Y93_10510 PF00182 Chitinase class I C3Y93_10520 PF04261 Dyp-type peroxidase family C3Y93_10525 PF01810 LysE type translocator C3Y93_10535 PF00950 ABC 3 transport family C3Y93_10540 PF00005 ABC transporter C3Y93_10560 PF00119 ATP synthase A chain C3Y93_10565 PF00137 ATP synthase subunit C C3Y93_10570 PF00430 ATP synthase B/B' CF(0) C3Y93_10575 PF00213 ATP synthase delta (OSCP) subunit C3Y93_10580 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3Y93_10580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3Y93_10580 PF00306 ATP synthase alpha/beta chain, C terminal domain C3Y93_10585 PF00231 ATP synthase C3Y93_10590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3Y93_10590 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3Y93_10595 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C3Y93_10605 PF00255 Glutathione peroxidase C3Y93_10610 PF00892 EamA-like transporter family C3Y93_10625 PF01300 Telomere recombination C3Y93_10630 PF17782 DprA winged helix domain C3Y93_10630 PF02481 DNA recombination-mediator protein A C3Y93_10640 PF01327 Polypeptide deformylase C3Y93_10680 PF07690 Major Facilitator Superfamily C3Y93_10685 PF07690 Major Facilitator Superfamily C3Y93_10690 PF08497 Radical SAM N-terminal C3Y93_10690 PF04055 Radical SAM superfamily C3Y93_10690 PF11842 Domain of unknown function (DUF3362) C3Y93_10700 PF01042 Endoribonuclease L-PSP C3Y93_10705 PF00817 impB/mucB/samB family C3Y93_10705 PF11798 IMS family HHH motif C3Y93_10705 PF11799 impB/mucB/samB family C-terminal domain C3Y93_10715 PF01183 Glycosyl hydrolases family 25 C3Y93_10720 PF01757 Acyltransferase family C3Y93_10725 PF07690 Major Facilitator Superfamily C3Y93_10735 PF03641 Possible lysine decarboxylase C3Y93_10745 PF03471 Transporter associated domain C3Y93_10745 PF03741 Integral membrane protein TerC family C3Y93_10750 PF02810 SEC-C motif C3Y93_10755 PF03458 UPF0126 domain C3Y93_10760 PF07690 Major Facilitator Superfamily C3Y93_10765 PF03989 DNA gyrase C-terminal domain, beta-propeller C3Y93_10765 PF00521 DNA gyrase/topoisomerase IV, subunit A C3Y93_10770 PF00501 AMP-binding enzyme C3Y93_10770 PF13193 AMP-binding enzyme C-terminal domain C3Y93_10785 PF00719 Inorganic pyrophosphatase C3Y93_10790 PF03573 outer membrane porin, OprD family C3Y93_10800 PF13335 Magnesium chelatase, subunit ChlI C-terminal C3Y93_10800 PF01078 Magnesium chelatase, subunit ChlI C3Y93_10810 PF00543 Nitrogen regulatory protein P-II C3Y93_10815 PF00909 Ammonium Transporter Family C3Y93_10820 PF03477 ATP cone domain C3Y93_10825 PF01872 RibD C-terminal domain C3Y93_10825 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3Y93_10835 PF00677 Lumazine binding domain C3Y93_10840 PF09335 SNARE associated Golgi protein C3Y93_10860 PF02789 Cytosol aminopeptidase family, N-terminal domain C3Y93_10860 PF00883 Cytosol aminopeptidase family, catalytic domain C3Y93_10865 PF03739 Lipopolysaccharide export system permease LptF/LptG C3Y93_10870 PF03739 Lipopolysaccharide export system permease LptF/LptG C3Y93_10875 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C3Y93_10875 PF01676 Metalloenzyme superfamily C3Y93_10880 PF17820 PDZ domain C3Y93_10880 PF01471 Putative peptidoglycan binding domain C3Y93_10880 PF03572 Peptidase family S41 C3Y93_10885 PF00158 Sigma-54 interaction domain C3Y93_10885 PF00072 Response regulator receiver domain C3Y93_10885 PF02954 Bacterial regulatory protein, Fis family C3Y93_10890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_10890 PF00512 His Kinase A (phospho-acceptor) domain C3Y93_10895 PF00196 Bacterial regulatory proteins, luxR family C3Y93_10895 PF00072 Response regulator receiver domain C3Y93_10900 PF00768 D-alanyl-D-alanine carboxypeptidase C3Y93_10905 PF00291 Pyridoxal-phosphate dependent enzyme C3Y93_10910 PF01842 ACT domain C3Y93_10910 PF00742 Homoserine dehydrogenase C3Y93_10910 PF03447 Homoserine dehydrogenase, NAD binding domain C3Y93_10915 PF10411 Disulfide bond isomerase protein N-terminus C3Y93_10915 PF13098 Thioredoxin-like domain C3Y93_10920 PF02899 Phage integrase, N-terminal SAM-like domain C3Y93_10920 PF00589 Phage integrase family C3Y93_10930 PF07670 Nucleoside recognition C3Y93_10930 PF07664 Ferrous iron transport protein B C terminus C3Y93_10930 PF02421 Ferrous iron transport protein B C3Y93_10940 PF02875 Mur ligase family, glutamate ligase domain C3Y93_10940 PF08245 Mur ligase middle domain C3Y93_10945 PF01098 Cell cycle protein C3Y93_10955 PF00749 tRNA synthetases class I (E and Q), catalytic domain C3Y93_10960 PF01258 Prokaryotic dksA/traR C4-type zinc finger C3Y93_10965 PF00149 Calcineurin-like phosphoesterase C3Y93_10970 PF00293 NUDIX domain C3Y93_10975 PF01964 Radical SAM ThiC family C3Y93_10975 PF13667 ThiC-associated domain C3Y93_10985 PF02321 Outer membrane efflux protein C3Y93_10990 PF01895 PhoU domain C3Y93_10995 PF04362 Bacterial Fe(2+) trafficking C3Y93_11000 PF14698 Argininosuccinate lyase C-terminal C3Y93_11000 PF00206 Lyase C3Y93_11005 PF07694 5TMR of 5TMR-LYT C3Y93_11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_11005 PF06580 Histidine kinase C3Y93_11010 PF04397 LytTr DNA-binding domain C3Y93_11010 PF00072 Response regulator receiver domain C3Y93_11015 PF03900 Porphobilinogen deaminase, C-terminal domain C3Y93_11015 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C3Y93_11035 PF03061 Thioesterase superfamily C3Y93_11040 PF00816 H-NS histone family C3Y93_11055 PF00263 Bacterial type II and III secretion system protein C3Y93_11055 PF03958 Bacterial type II/III secretion system short domain C3Y93_11060 PF16697 Inner membrane component of T3SS, cytoplasmic domain C3Y93_11065 PF13419 Haloacid dehalogenase-like hydrolase C3Y93_11070 PF04715 Anthranilate synthase component I, N terminal region C3Y93_11070 PF00425 chorismate binding enzyme C3Y93_11095 PF03143 Elongation factor Tu C-terminal domain C3Y93_11095 PF03144 Elongation factor Tu domain 2 C3Y93_11095 PF00009 Elongation factor Tu GTP binding domain C3Y93_11105 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C3Y93_11110 PF02357 Transcription termination factor nusG C3Y93_11110 PF00467 KOW motif C3Y93_11115 PF03946 Ribosomal protein L11, N-terminal domain C3Y93_11115 PF00298 Ribosomal protein L11, RNA binding domain C3Y93_11120 PF00687 Ribosomal protein L1p/L10e family C3Y93_11125 PF00466 Ribosomal protein L10 C3Y93_11130 PF00542 Ribosomal protein L7/L12 C-terminal domain C3Y93_11130 PF16320 Ribosomal protein L7/L12 dimerisation domain C3Y93_11135 PF04561 RNA polymerase Rpb2, domain 2 C3Y93_11135 PF04565 RNA polymerase Rpb2, domain 3 C3Y93_11135 PF10385 RNA polymerase beta subunit external 1 domain C3Y93_11135 PF00562 RNA polymerase Rpb2, domain 6 C3Y93_11135 PF04560 RNA polymerase Rpb2, domain 7 C3Y93_11135 PF04563 RNA polymerase beta subunit C3Y93_11140 PF00623 RNA polymerase Rpb1, domain 2 C3Y93_11140 PF04997 RNA polymerase Rpb1, domain 1 C3Y93_11140 PF05000 RNA polymerase Rpb1, domain 4 C3Y93_11140 PF04998 RNA polymerase Rpb1, domain 5 C3Y93_11140 PF04983 RNA polymerase Rpb1, domain 3 C3Y93_11165 PF00561 alpha/beta hydrolase fold C3Y93_11170 PF13726 Na+-H+ antiporter family C3Y93_11170 PF03553 Na+/H+ antiporter family C3Y93_11175 PF03922 OmpW family C3Y93_11185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_11185 PF00183 Hsp90 protein C3Y93_11210 PF01323 DSBA-like thioredoxin domain C3Y93_11225 PF02803 Thiolase, C-terminal domain C3Y93_11225 PF00108 Thiolase, N-terminal domain C3Y93_11230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C3Y93_11230 PF00378 Enoyl-CoA hydratase/isomerase C3Y93_11230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C3Y93_11245 PF07724 AAA domain (Cdc48 subfamily) C3Y93_11245 PF10431 C-terminal, D2-small domain, of ClpB protein C3Y93_11250 PF08459 UvrC Helix-hairpin-helix N-terminal C3Y93_11250 PF02151 UvrB/uvrC motif C3Y93_11250 PF01541 GIY-YIG catalytic domain C3Y93_11260 PF01066 CDP-alcohol phosphatidyltransferase C3Y93_11265 PF00664 ABC transporter transmembrane region C3Y93_11265 PF00005 ABC transporter C3Y93_11280 PF03652 Holliday junction resolvase C3Y93_11285 PF02622 Uncharacterized ACR, COG1678 C3Y93_11310 PF02463 RecF/RecN/SMC N terminal domain C3Y93_11315 PF06865 Pyrimidine/purine nucleoside phosphorylase C3Y93_11320 PF00588 SpoU rRNA Methylase family C3Y93_11320 PF08032 RNA 2'-O ribose methyltransferase substrate binding C3Y93_11330 PF01121 Dephospho-CoA kinase C3Y93_11335 PF01478 Type IV leader peptidase family C3Y93_11335 PF06750 Bacterial Peptidase A24 N-terminal domain C3Y93_11340 PF00482 Type II secretion system (T2SS), protein F C3Y93_11345 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C3Y93_11345 PF00437 Type II/IV secretion system protein C3Y93_11350 PF00121 Triosephosphate isomerase C3Y93_11355 PF03840 Preprotein translocase SecG subunit C3Y93_11380 PF17384 RimP C-terminal SH3 domain C3Y93_11380 PF02576 RimP N-terminal domain C3Y93_11385 PF00575 S1 RNA binding domain C3Y93_11385 PF08529 NusA N-terminal domain C3Y93_11385 PF13184 NusA-like KH domain C3Y93_11390 PF00009 Elongation factor Tu GTP binding domain C3Y93_11390 PF11987 Translation-initiation factor 2 C3Y93_11390 PF04760 Translation initiation factor IF-2, N-terminal region C3Y93_11390 PF08364 Bacterial translation initiation factor IF-2 associated region C3Y93_11395 PF02033 Ribosome-binding factor A C3Y93_11405 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C3Y93_11415 PF00361 Proton-conducting membrane transporter C3Y93_11420 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C3Y93_11425 PF13244 Domain of unknown function (DUF4040) C3Y93_11425 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C3Y93_11425 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C3Y93_11425 PF00361 Proton-conducting membrane transporter C3Y93_11440 PF01502 Phosphoribosyl-AMP cyclohydrolase C3Y93_11450 PF03109 ABC1 family C3Y93_11460 PF01209 ubiE/COQ5 methyltransferase family C3Y93_11470 PF03976 Polyphosphate kinase 2 (PPK2) C3Y93_11480 PF17946 RecC C-terminal domain C3Y93_11485 PF13361 UvrD-like helicase C-terminal domain C3Y93_11485 PF12705 PD-(D/E)XK nuclease superfamily C3Y93_11485 PF00580 UvrD/REP helicase N-terminal domain C3Y93_11490 PF13538 UvrD-like helicase C-terminal domain C3Y93_11495 PF00312 Ribosomal protein S15 C3Y93_11500 PF00013 KH domain C3Y93_11500 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C3Y93_11500 PF01138 3' exoribonuclease family, domain 1 C3Y93_11500 PF00575 S1 RNA binding domain C3Y93_11500 PF03725 3' exoribonuclease family, domain 2 C3Y93_11530 PF01430 Hsp33 protein C3Y93_11535 PF02254 TrkA-N domain C3Y93_11535 PF00999 Sodium/hydrogen exchanger family C3Y93_11540 PF00270 DEAD/DEAH box helicase C3Y93_11540 PF00271 Helicase conserved C-terminal domain C3Y93_11540 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C3Y93_11540 PF18074 Primosomal protein N C-terminal domain C3Y93_11540 PF17764 3′ DNA-binding domain (3′BD) C3Y93_11545 PF00482 Type II secretion system (T2SS), protein F C3Y93_11550 PF08334 Type II secretion system (T2SS), protein G C3Y93_11550 PF07963 Prokaryotic N-terminal methylation motif C3Y93_11555 PF00795 Carbon-nitrogen hydrolase C3Y93_11560 PF03471 Transporter associated domain C3Y93_11560 PF00571 CBS domain C3Y93_11565 PF01206 Sulfurtransferase TusA C3Y93_11605 PF01177 Asp/Glu/Hydantoin racemase C3Y93_11615 PF00762 Ferrochelatase C3Y93_11620 PF00753 Metallo-beta-lactamase superfamily C3Y93_11630 PF03884 DNA gyrase inhibitor YacG C3Y93_11640 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3Y93_11640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C3Y93_11650 PF08241 Methyltransferase domain C3Y93_11680 PF05746 DALR anticodon binding domain C3Y93_11680 PF02092 Glycyl-tRNA synthetase beta subunit C3Y93_11685 PF02091 Glycyl-tRNA synthetase alpha subunit C3Y93_11705 PF00571 CBS domain C3Y93_11710 PF04024 PspC domain C3Y93_11735 PF00501 AMP-binding enzyme C3Y93_11735 PF13193 AMP-binding enzyme C-terminal domain C3Y93_11740 PF12111 Polyribonucleotide phosphorylase C terminal C3Y93_11740 PF10150 Ribonuclease E/G family C3Y93_11740 PF00575 S1 RNA binding domain C3Y93_11750 PF00849 RNA pseudouridylate synthase C3Y93_11750 PF01479 S4 domain C3Y93_11755 PF13419 Haloacid dehalogenase-like hydrolase C3Y93_11760 PF01557 Fumarylacetoacetate (FAA) hydrolase family C3Y93_11765 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation C3Y93_11765 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3Y93_11770 PF07836 DmpG-like communication domain C3Y93_11770 PF00682 HMGL-like C3Y93_11775 PF03573 outer membrane porin, OprD family C3Y93_11780 PF00561 alpha/beta hydrolase fold C3Y93_11790 PF03466 LysR substrate binding domain C3Y93_11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_11795 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C3Y93_11795 PF00355 Rieske [2Fe-2S] domain C3Y93_11800 PF00866 Ring hydroxylating beta subunit C3Y93_11805 PF00355 Rieske [2Fe-2S] domain C3Y93_11810 PF00106 short chain dehydrogenase C3Y93_11815 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C3Y93_11820 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3Y93_11820 PF14759 Reductase C-terminal C3Y93_11825 PF00892 EamA-like transporter family C3Y93_11835 PF00199 Catalase C3Y93_11835 PF06628 Catalase-related immune-responsive C3Y93_11845 PF18158 Adaptive response protein AidB N-terminal domain C3Y93_11845 PF02770 Acyl-CoA dehydrogenase, middle domain C3Y93_11845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3Y93_11865 PF05524 PEP-utilising enzyme, N-terminal C3Y93_11865 PF02896 PEP-utilising enzyme, TIM barrel domain C3Y93_11865 PF00391 PEP-utilising enzyme, mobile domain C3Y93_11865 PF01590 GAF domain C3Y93_11870 PF00293 NUDIX domain C3Y93_11885 PF03466 LysR substrate binding domain C3Y93_11885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_11895 PF00330 Aconitase family (aconitate hydratase) C3Y93_11900 PF00694 Aconitase C-terminal domain C3Y93_11910 PF00180 Isocitrate/isopropylmalate dehydrogenase C3Y93_11920 PF01176 Translation initiation factor 1A / IF-1 C3Y93_11930 PF01416 tRNA pseudouridine synthase C3Y93_11935 PF17763 Glutaminase/Asparaginase C-terminal domain C3Y93_11935 PF00710 Asparaginase, N-terminal C3Y93_11950 PF02774 Semialdehyde dehydrogenase, dimerisation domain C3Y93_11950 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3Y93_11965 PF03279 Bacterial lipid A biosynthesis acyltransferase C3Y93_11995 PF01131 DNA topoisomerase C3Y93_11995 PF01396 Topoisomerase DNA binding C4 zinc finger C3Y93_11995 PF08272 Topoisomerase I zinc-ribbon-like C3Y93_11995 PF01751 Toprim domain C3Y93_12005 PF00580 UvrD/REP helicase N-terminal domain C3Y93_12005 PF13361 UvrD-like helicase C-terminal domain C3Y93_12010 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C3Y93_12025 PF02254 TrkA-N domain C3Y93_12025 PF00999 Sodium/hydrogen exchanger family C3Y93_12030 PF00471 Ribosomal protein L33 C3Y93_12035 PF00830 Ribosomal L28 family C3Y93_12040 PF00171 Aldehyde dehydrogenase family C3Y93_12045 PF08360 QacR-like protein, C-terminal region C3Y93_12045 PF00440 Bacterial regulatory proteins, tetR family C3Y93_12050 PF01842 ACT domain C3Y93_12050 PF00551 Formyl transferase C3Y93_12060 PF01618 MotA/TolQ/ExbB proton channel family C3Y93_12075 PF03631 Virulence factor BrkB C3Y93_12080 PF03358 NADPH-dependent FMN reductase C3Y93_12120 PF02130 Uncharacterized protein family UPF0054 C3Y93_12125 PF02562 PhoH-like protein C3Y93_12130 PF04055 Radical SAM superfamily C3Y93_12130 PF00919 Uncharacterized protein family UPF0004 C3Y93_12130 PF01938 TRAM domain C3Y93_12135 PF10145 Phage-related minor tail protein C3Y93_12135 PF01464 Transglycosylase SLT domain C3Y93_12135 PF01551 Peptidase family M23 C3Y93_12145 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C3Y93_12145 PF00056 lactate/malate dehydrogenase, NAD binding domain C3Y93_12150 PF04143 Sulphur transport C3Y93_12175 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C3Y93_12180 PF01066 CDP-alcohol phosphatidyltransferase C3Y93_12215 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3Y93_12215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3Y93_12215 PF00403 Heavy-metal-associated domain C3Y93_12230 PF04273 Putative phosphatase (DUF442) C3Y93_12230 PF00753 Metallo-beta-lactamase superfamily C3Y93_12240 PF00085 Thioredoxin C3Y93_12245 PF03061 Thioesterase superfamily C3Y93_12255 PF04461 Protein of unknown function (DUF520) C3Y93_12265 PF01266 FAD dependent oxidoreductase C3Y93_12265 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_12275 PF03795 YCII-related domain C3Y93_12280 PF04279 Intracellular septation protein A C3Y93_12290 PF01062 Bestrophin, RFP-TM, chloride channel C3Y93_12295 PF04002 RadC-like JAB domain C3Y93_12300 PF04127 DNA / pantothenate metabolism flavoprotein C3Y93_12300 PF02441 Flavoprotein C3Y93_12305 PF02556 Preprotein translocase subunit SecB C3Y93_12310 PF00462 Glutaredoxin C3Y93_12320 PF03193 RsgA GTPase C3Y93_12325 PF00929 Exonuclease C3Y93_12335 PF12833 Helix-turn-helix domain C3Y93_12335 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C3Y93_12340 PF00290 Tryptophan synthase alpha chain C3Y93_12345 PF01039 Carboxyl transferase domain C3Y93_12350 PF02875 Mur ligase family, glutamate ligase domain C3Y93_12350 PF08245 Mur ligase middle domain C3Y93_12360 PF00753 Metallo-beta-lactamase superfamily C3Y93_12365 PF10417 C-terminal domain of 1-Cys peroxiredoxin C3Y93_12365 PF00578 AhpC/TSA family C3Y93_12370 PF02810 SEC-C motif C3Y93_12370 PF07516 SecA Wing and Scaffold domain C3Y93_12370 PF07517 SecA DEAD-like domain C3Y93_12370 PF01043 SecA preprotein cross-linking domain C3Y93_12380 PF01960 ArgJ family C3Y93_12385 PF02445 Quinolinate synthetase A protein C3Y93_12410 PF00691 OmpA family C3Y93_12415 PF00563 EAL domain C3Y93_12415 PF03707 Bacterial signalling protein N terminal repeat C3Y93_12415 PF00990 Diguanylate cyclase, GGDEF domain C3Y93_12460 PF04386 Stringent starvation protein B C3Y93_12465 PF02798 Glutathione S-transferase, N-terminal domain C3Y93_12465 PF00043 Glutathione S-transferase, C-terminal domain C3Y93_12470 PF00380 Ribosomal protein S9/S16 C3Y93_12475 PF00572 Ribosomal protein L13 C3Y93_12485 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C3Y93_12490 PF00398 Ribosomal RNA adenine dimethylase C3Y93_12495 PF00149 Calcineurin-like phosphoesterase C3Y93_12525 PF16360 GTP-binding GTPase Middle Region C3Y93_12525 PF13167 GTP-binding GTPase N-terminal C3Y93_12525 PF01926 50S ribosome-binding GTPase C3Y93_12535 PF13091 PLD-like domain C3Y93_12540 PF00149 Calcineurin-like phosphoesterase C3Y93_12540 PF10518 TAT (twin-arginine translocation) pathway signal sequence C3Y93_12545 PF00083 Sugar (and other) transporter C3Y93_12545 PF07690 Major Facilitator Superfamily C3Y93_12550 PF03006 Haemolysin-III related C3Y93_12560 PF13673 Acetyltransferase (GNAT) domain C3Y93_12570 PF00378 Enoyl-CoA hydratase/isomerase C3Y93_12570 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C3Y93_12570 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C3Y93_12575 PF02803 Thiolase, C-terminal domain C3Y93_12575 PF00108 Thiolase, N-terminal domain C3Y93_12580 PF12833 Helix-turn-helix domain C3Y93_12580 PF02311 AraC-like ligand binding domain C3Y93_12585 PF02515 CoA-transferase family III C3Y93_12590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C3Y93_12590 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C3Y93_12600 PF01113 Dihydrodipicolinate reductase, N-terminus C3Y93_12600 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain C3Y93_12605 PF00108 Thiolase, N-terminal domain C3Y93_12605 PF02803 Thiolase, C-terminal domain C3Y93_12615 PF00691 OmpA family C3Y93_12615 PF13505 Outer membrane protein beta-barrel domain C3Y93_12620 PF00324 Amino acid permease C3Y93_12625 PF08468 Methyltransferase small domain N-terminal C3Y93_12625 PF05175 Methyltransferase small domain C3Y93_12630 PF00860 Permease family C3Y93_12640 PF01741 Large-conductance mechanosensitive channel, MscL C3Y93_12650 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C3Y93_12650 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C3Y93_12650 PF06827 Zinc finger found in FPG and IleRS C3Y93_12655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3Y93_12670 PF01571 Aminomethyltransferase folate-binding domain C3Y93_12675 PF00694 Aconitase C-terminal domain C3Y93_12675 PF00330 Aconitase family (aconitate hydratase) C3Y93_12680 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C3Y93_12705 PF00849 RNA pseudouridylate synthase C3Y93_12720 PF04343 Protein of unknown function, DUF488 C3Y93_12725 PF08274 PhnA Zinc-Ribbon C3Y93_12725 PF03831 PhnA domain C3Y93_12730 PF07411 Domain of unknown function (DUF1508) C3Y93_12735 PF06674 Protein of unknown function (DUF1176) C3Y93_12740 PF01207 Dihydrouridine synthase (Dus) C3Y93_12750 PF02881 SRP54-type protein, helical bundle domain C3Y93_12750 PF02978 Signal peptide binding domain C3Y93_12750 PF00448 SRP54-type protein, GTPase domain C3Y93_12755 PF03309 Type III pantothenate kinase C3Y93_12765 PF01925 Sulfite exporter TauE/SafE C3Y93_12775 PF06470 SMC proteins Flexible Hinge Domain C3Y93_12775 PF02463 RecF/RecN/SMC N terminal domain C3Y93_12780 PF04354 ZipA, C-terminal FtsZ-binding domain C3Y93_12785 PF12826 Helix-hairpin-helix motif C3Y93_12785 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C3Y93_12785 PF03120 NAD-dependent DNA ligase OB-fold domain C3Y93_12785 PF01653 NAD-dependent DNA ligase adenylation domain C3Y93_12785 PF00533 BRCA1 C Terminus (BRCT) domain C3Y93_12790 PF16363 GDP-mannose 4,6 dehydratase C3Y93_12795 PF00210 Ferritin-like domain C3Y93_12800 PF12697 Alpha/beta hydrolase family C3Y93_12800 PF08241 Methyltransferase domain C3Y93_12805 PF00202 Aminotransferase class-III C3Y93_12805 PF06968 Biotin and Thiamin Synthesis associated domain C3Y93_12805 PF04055 Radical SAM superfamily C3Y93_12810 PF00155 Aminotransferase class I and II C3Y93_12825 PF01479 S4 domain C3Y93_12825 PF00849 RNA pseudouridylate synthase C3Y93_12830 PF04079 Segregation and condensation complex subunit ScpB C3Y93_12835 PF02616 Segregation and condensation protein ScpA C3Y93_12840 PF01300 Telomere recombination C3Y93_12845 PF04315 Elongation factor P hydroxylase C3Y93_12850 PF02620 Large ribosomal RNA subunit accumulation protein YceD C3Y93_12855 PF01783 Ribosomal L32p protein family C3Y93_12860 PF00698 Acyl transferase domain C3Y93_12870 PF00550 Phosphopantetheine attachment site C3Y93_12875 PF01476 LysM domain C3Y93_12875 PF04972 BON domain C3Y93_12890 PF00268 Ribonucleotide reductase, small chain C3Y93_12900 PF02867 Ribonucleotide reductase, barrel domain C3Y93_12900 PF00317 Ribonucleotide reductase, all-alpha domain C3Y93_12900 PF03477 ATP cone domain C3Y93_12905 PF00486 Transcriptional regulatory protein, C terminal C3Y93_12905 PF00072 Response regulator receiver domain C3Y93_12910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3Y93_12910 PF00512 His Kinase A (phospho-acceptor) domain C3Y93_12910 PF00672 HAMP domain C3Y93_12915 PF00474 Sodium:solute symporter family C3Y93_12920 PF01145 SPFH domain / Band 7 family C3Y93_12930 PF01734 Patatin-like phospholipase C3Y93_12945 PF04239 Protein of unknown function (DUF421) C3Y93_12955 PF01556 DnaJ C terminal domain C3Y93_12955 PF00226 DnaJ domain C3Y93_12955 PF00684 DnaJ central domain C3Y93_12960 PF08264 Anticodon-binding domain of tRNA C3Y93_12960 PF00133 tRNA synthetases class I (I, L, M and V) C3Y93_12960 PF10458 Valyl tRNA synthetase tRNA binding arm C3Y93_12980 PF01906 Putative heavy-metal-binding C3Y93_12985 PF01906 Putative heavy-metal-binding C3Y93_12990 PF02321 Outer membrane efflux protein C3Y93_12995 PF00873 AcrB/AcrD/AcrF family C3Y93_13000 PF00529 HlyD membrane-fusion protein of T1SS C3Y93_13000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3Y93_13005 PF01569 PAP2 superfamily C3Y93_13015 PF00348 Polyprenyl synthetase C3Y93_13020 PF00829 Ribosomal prokaryotic L21 protein C3Y93_13025 PF01016 Ribosomal L27 protein C3Y93_13030 PF03548 Outer membrane lipoprotein carrier protein LolA C3Y93_13045 PF02403 Seryl-tRNA synthetase N-terminal domain C3Y93_13045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3Y93_13050 PF14824 Sirohaem biosynthesis protein central C3Y93_13050 PF10414 Sirohaem synthase dimerisation region C3Y93_13050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3Y93_13055 PF00588 SpoU rRNA Methylase family C3Y93_13060 PF13520 Amino acid permease C3Y93_13065 PF00465 Iron-containing alcohol dehydrogenase C3Y93_13075 PF03099 Biotin/lipoate A/B protein ligase family C3Y93_13080 PF04359 Protein of unknown function (DUF493) C3Y93_13085 PF04542 Sigma-70 region 2 C3Y93_13085 PF04546 Sigma-70, non-essential region C3Y93_13085 PF03979 Sigma-70 factor, region 1.1 C3Y93_13085 PF00140 Sigma-70 factor, region 1.2 C3Y93_13085 PF04539 Sigma-70 region 3 C3Y93_13085 PF04545 Sigma-70, region 4 C3Y93_13110 PF09335 SNARE associated Golgi protein C3Y93_13130 PF02261 Aspartate decarboxylase C3Y93_13135 PF01195 Peptidyl-tRNA hydrolase C3Y93_13140 PF01386 Ribosomal L25p family C3Y93_13145 PF14572 Phosphoribosyl synthetase-associated domain C3Y93_13145 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C3Y93_13170 PF00288 GHMP kinases N terminal domain C3Y93_13170 PF08544 GHMP kinases C terminal C3Y93_13175 PF03550 Outer membrane lipoprotein LolB C3Y93_13185 PF01488 Shikimate / quinate 5-dehydrogenase C3Y93_13185 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C3Y93_13185 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C3Y93_13190 PF08278 DNA primase DnaG DnaB-binding C3Y93_13190 PF10410 DnaB-helicase binding domain of primase C3Y93_13190 PF08275 DNA primase catalytic core, N-terminal domain C3Y93_13190 PF01807 CHC2 zinc finger C3Y93_13195 PF13525 Outer membrane lipoprotein C3Y93_13200 PF01479 S4 domain C3Y93_13200 PF00849 RNA pseudouridylate synthase C3Y93_13210 PF03358 NADPH-dependent FMN reductase C3Y93_13215 PF01668 SmpB protein C3Y93_13220 PF01467 Cytidylyltransferase-like C3Y93_13225 PF00037 4Fe-4S binding domain C3Y93_13250 PF00795 Carbon-nitrogen hydrolase C3Y93_13250 PF02540 NAD synthase C3Y93_13260 PF00285 Citrate synthase, C-terminal domain C3Y93_13265 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C3Y93_13270 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C3Y93_13275 PF00890 FAD binding domain C3Y93_13275 PF02910 Fumarate reductase flavoprotein C-term C3Y93_13280 PF13085 2Fe-2S iron-sulfur cluster binding domain C3Y93_13290 PF16078 2-oxoglutarate dehydrogenase N-terminus C3Y93_13290 PF00676 Dehydrogenase E1 component C3Y93_13290 PF16870 2-oxoglutarate dehydrogenase C-terminal C3Y93_13290 PF02779 Transketolase, pyrimidine binding domain C3Y93_13295 PF02817 e3 binding domain C3Y93_13295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3Y93_13295 PF00364 Biotin-requiring enzyme C3Y93_13300 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3Y93_13300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3Y93_13305 PF08442 ATP-grasp domain C3Y93_13305 PF00549 CoA-ligase C3Y93_13310 PF00549 CoA-ligase C3Y93_13310 PF02629 CoA binding domain C3Y93_13315 PF00579 tRNA synthetases class I (W and Y) C3Y93_13320 PF05661 Protein of unknown function (DUF808) C3Y93_13325 PF04228 Putative neutral zinc metallopeptidase C3Y93_13330 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C3Y93_13335 PF00582 Universal stress protein family C3Y93_13340 PF00132 Bacterial transferase hexapeptide (six repeats) C3Y93_13350 PF01272 Transcription elongation factor, GreA/GreB, C-term C3Y93_13350 PF03449 Transcription elongation factor, N-terminal C3Y93_13355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3Y93_13355 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C3Y93_13355 PF02142 MGS-like domain C3Y93_13360 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C3Y93_13360 PF00117 Glutamine amidotransferase class-I C3Y93_13375 PF01985 CRS1 / YhbY (CRM) domain C3Y93_13380 PF01728 FtsJ-like methyltransferase C3Y93_13385 PF17862 AAA+ lid domain C3Y93_13385 PF06480 FtsH Extracellular C3Y93_13385 PF01434 Peptidase family M41 C3Y93_13385 PF00004 ATPase family associated with various cellular activities (AAA) C3Y93_13390 PF00809 Pterin binding enzyme C3Y93_13410 PF16655 PhoD-like phosphatase, N-terminal domain C3Y93_13410 PF09423 PhoD-like phosphatase C3Y93_13430 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C3Y93_13430 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C3Y93_13450 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain C3Y93_13450 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain C3Y93_13455 PF00781 Diacylglycerol kinase catalytic domain C3Y93_13465 PF00166 Chaperonin 10 Kd subunit C3Y93_13470 PF00118 TCP-1/cpn60 chaperonin family C3Y93_13485 PF00873 AcrB/AcrD/AcrF family C3Y93_13490 PF00571 CBS domain C3Y93_13490 PF03448 MgtE intracellular N domain C3Y93_13490 PF01769 Divalent cation transporter C3Y93_13500 PF01435 Peptidase family M48 C3Y93_13505 PF01551 Peptidase family M23 C3Y93_13505 PF10145 Phage-related minor tail protein C3Y93_13505 PF01464 Transglycosylase SLT domain C3Y93_13510 PF01171 PP-loop family C3Y93_13520 PF01464 Transglycosylase SLT domain C3Y93_13520 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3Y93_13525 PF03449 Transcription elongation factor, N-terminal C3Y93_13525 PF01272 Transcription elongation factor, GreA/GreB, C-term C3Y93_13535 PF13291 ACT domain C3Y93_13535 PF02824 TGS domain C3Y93_13535 PF04607 Region found in RelA / SpoT proteins C3Y93_13540 PF02574 Homocysteine S-methyltransferase C3Y93_13540 PF02310 B12 binding domain C3Y93_13540 PF02965 Vitamin B12 dependent methionine synthase, activation domain C3Y93_13540 PF02607 B12 binding domain C3Y93_13540 PF00809 Pterin binding enzyme C3Y93_13545 PF01384 Phosphate transporter family C3Y93_13565 PF01106 NifU-like domain C3Y93_13565 PF01521 Iron-sulphur cluster biosynthesis C3Y93_13575 PF00561 alpha/beta hydrolase fold C3Y93_13580 PF00484 Carbonic anhydrase C3Y93_13585 PF13472 GDSL-like Lipase/Acylhydrolase family C3Y93_13590 PF00005 ABC transporter C3Y93_13600 PF01694 Rhomboid family C3Y93_13605 PF00912 Transglycosylase C3Y93_13610 PF13090 Polyphosphate kinase C-terminal domain 2 C3Y93_13610 PF17941 Polyphosphate kinase C-terminal domain 1 C3Y93_13610 PF13089 Polyphosphate kinase N-terminal domain C3Y93_13610 PF02503 Polyphosphate kinase middle domain C3Y93_13620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3Y93_13620 PF03466 LysR substrate binding domain C3Y93_13625 PF00561 alpha/beta hydrolase fold C3Y93_13630 PF18113 Rubredoxin binding C-terminal domain C3Y93_13630 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3Y93_13635 PF00301 Rubredoxin C3Y93_13640 PF00156 Phosphoribosyl transferase domain C3Y93_13650 PF00152 tRNA synthetases class II (D, K and N) C3Y93_13650 PF01336 OB-fold nucleic acid binding domain C3Y93_13655 PF01381 Helix-turn-helix C3Y93_13660 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB C3Y93_13670 PF01507 Phosphoadenosine phosphosulfate reductase family C3Y93_13675 PF00009 Elongation factor Tu GTP binding domain C3Y93_13710 PF06505 Activator of aromatic catabolism C3Y93_13710 PF02830 V4R domain C3Y93_13710 PF00158 Sigma-54 interaction domain C3Y93_13710 PF02954 Bacterial regulatory protein, Fis family C3Y93_13715 PF06099 Phenol hydroxylase subunit C3Y93_13720 PF02332 Methane/Phenol/Toluene Hydroxylase C3Y93_13725 PF02406 MmoB/DmpM family C3Y93_13730 PF02332 Methane/Phenol/Toluene Hydroxylase C3Y93_13730 PF04945 YHS domain C3Y93_13740 PF00175 Oxidoreductase NAD-binding domain C3Y93_13740 PF00111 2Fe-2S iron-sulfur cluster binding domain C3Y93_13740 PF00970 Oxidoreductase FAD-binding domain C3Y93_13745 PF00775 Dioxygenase C3Y93_13745 PF04444 Catechol dioxygenase N terminus C3Y93_13760 PF02678 Pirin C3Y93_13760 PF17954 Quercetinase C-terminal cupin domain C3Y93_13770 PF01208 Uroporphyrinogen decarboxylase (URO-D) C3Y93_13775 PF05675 Protein of unknown function (DUF817) C3Y93_13790 PF00990 Diguanylate cyclase, GGDEF domain C3Y93_13805 PF00218 Indole-3-glycerol phosphate synthase C3Y93_13810 PF02885 Glycosyl transferase family, helical bundle domain C3Y93_13810 PF00591 Glycosyl transferase family, a/b domain C3Y93_13815 PF00117 Glutamine amidotransferase class-I C3Y93_13825 PF04345 Chorismate lyase C3Y93_13830 PF01040 UbiA prenyltransferase family C3Y93_13865 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C3Y93_13865 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C3Y93_13870 PF01784 NIF3 (NGG1p interacting factor 3) C3Y93_13875 PF13180 PDZ domain C3Y93_13875 PF17820 PDZ domain C3Y93_13885 PF18073 Rubredoxin metal binding domain C3Y93_13890 PF01235 Sodium:alanine symporter family C3Y93_13900 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C3Y93_13900 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C3Y93_13905 PF01678 Diaminopimelate epimerase C3Y93_13910 PF00561 alpha/beta hydrolase fold C3Y93_13915 PF02899 Phage integrase, N-terminal SAM-like domain C3Y93_13915 PF00589 Phage integrase family C3Y93_13925 PF01012 Electron transfer flavoprotein domain C3Y93_13930 PF00766 Electron transfer flavoprotein FAD-binding domain C3Y93_13930 PF01012 Electron transfer flavoprotein domain C3Y93_13935 PF00521 DNA gyrase/topoisomerase IV, subunit A C3Y93_13935 PF03989 DNA gyrase C-terminal domain, beta-propeller C3Y93_13955 PF13533 Biotin-lipoyl like C3Y93_13980 PF00266 Aminotransferase class-V C3Y93_13990 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C3Y93_14005 PF02687 FtsX-like permease family C3Y93_14005 PF12704 MacB-like periplasmic core domain C3Y93_14010 PF00005 ABC transporter C3Y93_14015 PF00753 Metallo-beta-lactamase superfamily C3Y93_14015 PF13567 Domain of unknown function (DUF4131) C3Y93_14015 PF03772 Competence protein C3Y93_14025 PF06965 Na+/H+ antiporter 1 C3Y93_14025 PF01343 Peptidase family S49 C3Y93_14035 PF00551 Formyl transferase C3Y93_14040 PF02769 AIR synthase related protein, C-terminal domain C3Y93_14040 PF00586 AIR synthase related protein, N-terminal domain C3Y93_14050 PF02796 Helix-turn-helix domain of resolvase C3Y93_14050 PF00239 Resolvase, N terminal domain C3Y93_14055 PF01636 Phosphotransferase enzyme family C3Y93_14080 PF01381 Helix-turn-helix C3Y93_14085 PF05973 Phage derived protein Gp49-like (DUF891) C3Y93_14095 PF01636 Phosphotransferase enzyme family C3Y93_14100 PF00665 Integrase core domain C3Y93_14100 PF13936 Helix-turn-helix domain C3Y93_14105 PF00753 Metallo-beta-lactamase superfamily C3Y93_14120 PF00239 Resolvase, N terminal domain C3Y93_14120 PF02796 Helix-turn-helix domain of resolvase C3Y93_14175 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C3Y93_14200 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C3Y93_14200 PF18766 SWI2/SNF2 ATPase C3Y93_14200 PF12008 Type I restriction and modification enzyme - subunit R C terminal C3Y93_14210 PF02384 N-6 DNA Methylase C3Y93_14210 PF12161 HsdM N-terminal domain