C3Y93_11265 49a5e13269ab64a1492451207845ea18 600 Pfam PF00005 ABC transporter 362 507 7.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_11265 49a5e13269ab64a1492451207845ea18 600 SMART SM00382 371 560 3.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_11265 49a5e13269ab64a1492451207845ea18 600 Gene3D G3DSA:1.20.1560.10 6 330 2.2E-43 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3Y93_11265 49a5e13269ab64a1492451207845ea18 600 Gene3D G3DSA:3.40.50.300 339 592 1.8E-76 T 14-10-2018 C3Y93_11265 49a5e13269ab64a1492451207845ea18 600 SUPERFAMILY SSF90123 9 334 1.16E-47 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3Y93_11265 49a5e13269ab64a1492451207845ea18 600 Pfam PF00664 ABC transporter transmembrane region 22 295 1.1E-22 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 C3Y93_11265 49a5e13269ab64a1492451207845ea18 600 SUPERFAMILY SSF52540 337 575 2.97E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11265 49a5e13269ab64a1492451207845ea18 600 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_02650 12fdd9be9e518dd452ab2927844e9a7b 369 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 191 222 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 C3Y93_02650 12fdd9be9e518dd452ab2927844e9a7b 369 SUPERFAMILY SSF51604 125 368 6.42E-66 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily C3Y93_02650 12fdd9be9e518dd452ab2927844e9a7b 369 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 2 369 5.4E-176 T 14-10-2018 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 C3Y93_02650 12fdd9be9e518dd452ab2927844e9a7b 369 SMART SM00922 144 241 5.9E-22 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal C3Y93_02650 12fdd9be9e518dd452ab2927844e9a7b 369 Gene3D G3DSA:3.30.390.10 28 364 1.7E-118 T 14-10-2018 IPR029017 Enolase-like, N-terminal C3Y93_02650 12fdd9be9e518dd452ab2927844e9a7b 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 8 125 2.7E-30 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain C3Y93_02650 12fdd9be9e518dd452ab2927844e9a7b 369 Pfam PF13378 Enolase C-terminal domain-like 148 361 7.4E-47 T 14-10-2018 IPR029065 Enolase C-terminal domain-like C3Y93_02650 12fdd9be9e518dd452ab2927844e9a7b 369 SUPERFAMILY SSF54826 4 126 5.3E-31 T 14-10-2018 C3Y93_02650 12fdd9be9e518dd452ab2927844e9a7b 369 Gene3D G3DSA:3.20.20.120 118 353 1.7E-118 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 330 345 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 SUPERFAMILY SSF52540 245 479 1.22E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 268 281 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 Pfam PF00158 Sigma-54 interaction domain 245 410 2.9E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 457 466 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 SUPERFAMILY SSF46689 457 556 1.25E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 Gene3D G3DSA:1.10.10.60 490 557 1.4E-13 T 14-10-2018 C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 Pfam PF02954 Bacterial regulatory protein, Fis family 514 554 2.6E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 Pfam PF02830 V4R domain 133 193 1.7E-14 T 14-10-2018 IPR004096 4-vinyl reductase, 4VR C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 SUPERFAMILY SSF111126 57 189 3.61E-9 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 39 149 9.0E-44 T 14-10-2018 IPR010523 Activator of aromatic catabolism C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 SMART SM00382 264 408 9.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 Pfam PF06505 Activator of aromatic catabolism 21 118 6.7E-32 T 14-10-2018 IPR010523 Activator of aromatic catabolism C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 Gene3D G3DSA:3.30.1380.20 18 199 7.9E-7 T 14-10-2018 C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 SMART SM00989 132 194 1.8E-18 T 14-10-2018 IPR004096 4-vinyl reductase, 4VR C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 520 537 1.4E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 537 557 1.4E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 Gene3D G3DSA:3.40.50.300 231 414 2.7E-65 T 14-10-2018 C3Y93_13710 a8f12b2d08088f163c719f4b1d1ed473 557 Gene3D G3DSA:1.10.8.60 415 482 9.6E-26 T 14-10-2018 C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 Pfam PF00684 DnaJ central domain 148 208 8.6E-15 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 Gene3D G3DSA:2.60.260.20 118 249 9.0E-38 T 14-10-2018 C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 SUPERFAMILY SSF57938 135 210 5.89E-22 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 Gene3D G3DSA:2.10.230.10 148 208 9.0E-38 T 14-10-2018 C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 349 3.3E-142 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 SUPERFAMILY SSF46565 1 106 8.24E-38 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 SUPERFAMILY SSF49493 259 344 2.49E-22 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 Gene3D G3DSA:2.60.260.20 254 366 1.8E-29 T 14-10-2018 C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 SMART SM00271 4 62 2.3E-36 T 14-10-2018 IPR001623 DnaJ domain C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 Pfam PF00226 DnaJ domain 5 67 4.4E-31 T 14-10-2018 IPR001623 DnaJ domain C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 Pfam PF01556 DnaJ C terminal domain 122 333 7.6E-42 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 SUPERFAMILY SSF49493 114 262 5.1E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 370 41.548 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 Gene3D G3DSA:1.10.287.110 1 115 7.1E-41 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 PRINTS PR00625 DnaJ domain signature 25 40 1.2E-34 T 14-10-2018 IPR001623 DnaJ domain C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 PRINTS PR00625 DnaJ domain signature 62 81 1.2E-34 T 14-10-2018 IPR001623 DnaJ domain C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 PRINTS PR00625 DnaJ domain signature 7 25 1.2E-34 T 14-10-2018 IPR001623 DnaJ domain C3Y93_10050 9853fc3558ad32ed4c48d4ed7c31c569 371 PRINTS PR00625 DnaJ domain signature 42 62 1.2E-34 T 14-10-2018 IPR001623 DnaJ domain C3Y93_03445 44058f5976e924b102ad2101f00f7b8b 360 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 342 352 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site C3Y93_03445 44058f5976e924b102ad2101f00f7b8b 360 Gene3D G3DSA:3.40.1350.30 39 181 2.0E-133 T 14-10-2018 C3Y93_03445 44058f5976e924b102ad2101f00f7b8b 360 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 1 360 42.929 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 C3Y93_03445 44058f5976e924b102ad2101f00f7b8b 360 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 4 359 3.2E-164 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 C3Y93_03445 44058f5976e924b102ad2101f00f7b8b 360 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 4 359 2.1E-167 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 C3Y93_03445 44058f5976e924b102ad2101f00f7b8b 360 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 293 322 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site C3Y93_03445 44058f5976e924b102ad2101f00f7b8b 360 Gene3D G3DSA:3.40.50.150 7 356 2.0E-133 T 14-10-2018 C3Y93_03445 44058f5976e924b102ad2101f00f7b8b 360 SUPERFAMILY SSF53335 3 359 9.07E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_05355 48447608d856d434c619e03acf62d7f7 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 5.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_05355 48447608d856d434c619e03acf62d7f7 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 414 5.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_05355 48447608d856d434c619e03acf62d7f7 436 Gene3D G3DSA:1.10.287.130 170 280 1.9E-20 T 14-10-2018 C3Y93_05355 48447608d856d434c619e03acf62d7f7 436 SUPERFAMILY SSF55874 270 435 9.17E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_05355 48447608d856d434c619e03acf62d7f7 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 435 2.8E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_05355 48447608d856d434c619e03acf62d7f7 436 SUPERFAMILY SSF47384 203 280 7.46E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3Y93_05355 48447608d856d434c619e03acf62d7f7 436 SMART SM00387 327 436 5.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_05355 48447608d856d434c619e03acf62d7f7 436 Gene3D G3DSA:3.30.565.10 281 435 1.0E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_05355 48447608d856d434c619e03acf62d7f7 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 220 280 8.2E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_05355 48447608d856d434c619e03acf62d7f7 436 SMART SM00388 219 281 3.7E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_09470 01e1d8d5c1947644aaadd0e08b5ce235 406 SUPERFAMILY SSF55021 1 83 1.33E-9 T 14-10-2018 C3Y93_09470 01e1d8d5c1947644aaadd0e08b5ce235 406 Pfam PF13740 ACT domain 3 79 2.2E-21 T 14-10-2018 C3Y93_09470 01e1d8d5c1947644aaadd0e08b5ce235 406 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 178 396 4.0E-81 T 14-10-2018 C3Y93_09470 01e1d8d5c1947644aaadd0e08b5ce235 406 Pfam PF12710 haloacid dehalogenase-like hydrolase 194 361 9.0E-22 T 14-10-2018 C3Y93_09470 01e1d8d5c1947644aaadd0e08b5ce235 406 Gene3D G3DSA:3.30.70.260 2 84 1.6E-9 T 14-10-2018 C3Y93_09470 01e1d8d5c1947644aaadd0e08b5ce235 406 Gene3D G3DSA:3.40.50.1000 106 397 3.2E-83 T 14-10-2018 IPR023214 HAD superfamily C3Y93_09470 01e1d8d5c1947644aaadd0e08b5ce235 406 SUPERFAMILY SSF56784 189 396 4.8E-53 T 14-10-2018 IPR036412 HAD-like superfamily C3Y93_09470 01e1d8d5c1947644aaadd0e08b5ce235 406 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 193 363 3.9E-33 T 14-10-2018 C3Y93_01015 1cf13c482fe5e11d5647bd5cc2decb3b 156 Gene3D G3DSA:1.10.10.10 1 55 5.3E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_01015 1cf13c482fe5e11d5647bd5cc2decb3b 156 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 9.1E-18 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain C3Y93_01015 1cf13c482fe5e11d5647bd5cc2decb3b 156 SUPERFAMILY SSF54909 65 144 1.47E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel C3Y93_01015 1cf13c482fe5e11d5647bd5cc2decb3b 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 48 1.5E-9 T 14-10-2018 C3Y93_01015 1cf13c482fe5e11d5647bd5cc2decb3b 156 Gene3D G3DSA:3.30.70.920 56 140 1.9E-20 T 14-10-2018 C3Y93_01015 1cf13c482fe5e11d5647bd5cc2decb3b 156 SUPERFAMILY SSF46785 2 86 5.38E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_01015 1cf13c482fe5e11d5647bd5cc2decb3b 156 SMART SM00344 3 112 5.5E-22 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 C3Y93_08050 7155ac4a48d17cb09940bc26b79b8a15 469 Gene3D G3DSA:1.10.45.10 427 466 1.3E-14 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 C3Y93_08050 7155ac4a48d17cb09940bc26b79b8a15 469 Gene3D G3DSA:3.30.70.2190 227 338 1.4E-26 T 14-10-2018 C3Y93_08050 7155ac4a48d17cb09940bc26b79b8a15 469 Gene3D G3DSA:3.30.70.2740 341 426 4.0E-27 T 14-10-2018 C3Y93_08050 7155ac4a48d17cb09940bc26b79b8a15 469 Pfam PF02913 FAD linked oxidases, C-terminal domain 222 466 1.9E-60 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 C3Y93_08050 7155ac4a48d17cb09940bc26b79b8a15 469 Gene3D G3DSA:3.30.465.40 7 226 1.2E-68 T 14-10-2018 C3Y93_08050 7155ac4a48d17cb09940bc26b79b8a15 469 SUPERFAMILY SSF56176 4 222 2.71E-67 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3Y93_08050 7155ac4a48d17cb09940bc26b79b8a15 469 Pfam PF01565 FAD binding domain 46 184 4.5E-40 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C3Y93_08050 7155ac4a48d17cb09940bc26b79b8a15 469 SUPERFAMILY SSF55103 226 468 1.8E-61 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 C3Y93_12035 954c22c7ff3848ccfb5ad5037450d75d 78 SUPERFAMILY SSF143800 2 77 3.53E-30 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_12035 954c22c7ff3848ccfb5ad5037450d75d 78 Pfam PF00830 Ribosomal L28 family 3 61 6.0E-27 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_12035 954c22c7ff3848ccfb5ad5037450d75d 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 3.5E-28 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_12035 954c22c7ff3848ccfb5ad5037450d75d 78 Gene3D G3DSA:2.30.170.40 2 78 6.1E-33 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_12035 954c22c7ff3848ccfb5ad5037450d75d 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.479 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 SMART SM00836 475 596 7.8E-51 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 SUPERFAMILY SSF52374 114 485 1.95E-82 T 14-10-2018 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 Gene3D G3DSA:1.10.730.10 470 596 1.5E-33 T 14-10-2018 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 SMART SM01016 3 91 1.9E-34 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 91 7.0E-22 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 SUPERFAMILY SSF47323 470 596 1.7E-33 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 Pfam PF05746 DALR anticodon binding domain 475 596 3.6E-34 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 3.6E-19 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 3.6E-19 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 3.6E-19 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 344 365 3.6E-19 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 Gene3D G3DSA:3.30.1360.70 1 111 4.3E-24 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 Pfam PF00750 tRNA synthetases class I (R) 293 444 2.3E-10 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 Pfam PF00750 tRNA synthetases class I (R) 101 177 2.8E-10 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 5 596 1.1E-130 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 SUPERFAMILY SSF55190 21 111 5.1E-23 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 C3Y93_10395 e8944045ae1f4e829bae97b7d87f1a03 596 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 596 24.899 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C3Y93_10650 47b4793323ac4157575ea0d0d8350f83 679 Gene3D G3DSA:2.170.130.10 44 166 1.3E-10 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3Y93_10650 47b4793323ac4157575ea0d0d8350f83 679 Pfam PF00593 TonB dependent receptor 211 678 1.4E-35 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3Y93_10650 47b4793323ac4157575ea0d0d8350f83 679 Gene3D G3DSA:2.40.170.20 167 679 2.6E-56 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C3Y93_10650 47b4793323ac4157575ea0d0d8350f83 679 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 154 3.7E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3Y93_10650 47b4793323ac4157575ea0d0d8350f83 679 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 58 679 4.1E-218 T 14-10-2018 IPR010100 TonB-dependent copper receptor C3Y93_10650 47b4793323ac4157575ea0d0d8350f83 679 SUPERFAMILY SSF56935 60 679 6.8E-77 T 14-10-2018 C3Y93_11955 257288a566950aa34820855907cd6206 375 Gene3D G3DSA:3.60.10.10 103 322 1.1E-20 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C3Y93_11955 257288a566950aa34820855907cd6206 375 SUPERFAMILY SSF56219 101 319 3.14E-31 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C3Y93_11955 257288a566950aa34820855907cd6206 375 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 119 312 3.4E-14 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase C3Y93_05420 077abdd3d4a9d1970e6834ebad99f288 200 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 8 188 3.8E-42 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase C3Y93_05420 077abdd3d4a9d1970e6834ebad99f288 200 PIRSF PIRSF006806 3 191 2.8E-41 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase C3Y93_05420 077abdd3d4a9d1970e6834ebad99f288 200 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 188 4.1E-45 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase C3Y93_05420 077abdd3d4a9d1970e6834ebad99f288 200 SUPERFAMILY SSF100950 7 196 8.93E-48 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C3Y93_05420 077abdd3d4a9d1970e6834ebad99f288 200 Gene3D G3DSA:3.40.50.10420 5 200 3.5E-51 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily C3Y93_02195 2e00e563ecce47c5da0cf1971b12e3a6 380 SUPERFAMILY SSF47819 292 366 8.5E-17 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 C3Y93_02195 2e00e563ecce47c5da0cf1971b12e3a6 380 SMART SM00474 2 169 7.2E-20 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 C3Y93_02195 2e00e563ecce47c5da0cf1971b12e3a6 380 SUPERFAMILY SSF47819 199 287 9.16E-19 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 C3Y93_02195 2e00e563ecce47c5da0cf1971b12e3a6 380 Gene3D G3DSA:3.30.420.10 1 190 5.2E-46 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_02195 2e00e563ecce47c5da0cf1971b12e3a6 380 SUPERFAMILY SSF53098 3 206 5.46E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_02195 2e00e563ecce47c5da0cf1971b12e3a6 380 Pfam PF00570 HRDC domain 210 277 2.2E-15 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 C3Y93_02195 2e00e563ecce47c5da0cf1971b12e3a6 380 Pfam PF01612 3'-5' exonuclease 3 168 6.3E-22 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 C3Y93_02195 2e00e563ecce47c5da0cf1971b12e3a6 380 Gene3D G3DSA:1.10.150.80 296 370 6.0E-11 T 14-10-2018 C3Y93_02195 2e00e563ecce47c5da0cf1971b12e3a6 380 Gene3D G3DSA:1.10.150.80 198 288 1.4E-14 T 14-10-2018 C3Y93_11545 95ae085cea38987f1fd65549911042f2 401 Gene3D G3DSA:1.20.81.30 55 170 3.1E-28 T 14-10-2018 C3Y93_11545 95ae085cea38987f1fd65549911042f2 401 Gene3D G3DSA:1.20.81.30 254 364 1.4E-25 T 14-10-2018 C3Y93_11545 95ae085cea38987f1fd65549911042f2 401 Pfam PF00482 Type II secretion system (T2SS), protein F 70 191 1.1E-29 T 14-10-2018 IPR018076 Type II secretion system F domain C3Y93_11545 95ae085cea38987f1fd65549911042f2 401 Pfam PF00482 Type II secretion system (T2SS), protein F 271 393 2.4E-27 T 14-10-2018 IPR018076 Type II secretion system F domain C3Y93_11545 95ae085cea38987f1fd65549911042f2 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 1.2E-30 T 14-10-2018 IPR003004 GspF/PilC family C3Y93_11545 95ae085cea38987f1fd65549911042f2 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 366 380 1.2E-30 T 14-10-2018 IPR003004 GspF/PilC family C3Y93_11545 95ae085cea38987f1fd65549911042f2 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 1.2E-30 T 14-10-2018 IPR003004 GspF/PilC family C3Y93_11545 95ae085cea38987f1fd65549911042f2 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 1.2E-30 T 14-10-2018 IPR003004 GspF/PilC family C3Y93_11545 95ae085cea38987f1fd65549911042f2 401 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 163 191 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 C3Y93_11545 95ae085cea38987f1fd65549911042f2 401 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 401 2.5E-144 T 14-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 C3Y93_05460 2707b858d725b99ad05959eb624be969 229 TIGRFAM TIGR01083 nth: endonuclease III 3 194 1.6E-83 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 C3Y93_05460 2707b858d725b99ad05959eb624be969 229 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.789 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 C3Y93_05460 2707b858d725b99ad05959eb624be969 229 Gene3D G3DSA:1.10.1670.10 11 203 3.2E-75 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 C3Y93_05460 2707b858d725b99ad05959eb624be969 229 SMART SM00478 38 185 4.4E-55 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C3Y93_05460 2707b858d725b99ad05959eb624be969 229 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 167 2.1E-17 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C3Y93_05460 2707b858d725b99ad05959eb624be969 229 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 C3Y93_05460 2707b858d725b99ad05959eb624be969 229 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 C3Y93_05460 2707b858d725b99ad05959eb624be969 229 PIRSF PIRSF001435 1 209 5.6E-51 T 14-10-2018 C3Y93_05460 2707b858d725b99ad05959eb624be969 229 Gene3D G3DSA:1.10.340.30 21 132 3.2E-75 T 14-10-2018 C3Y93_05460 2707b858d725b99ad05959eb624be969 229 SUPERFAMILY SSF48150 3 206 1.18E-70 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 C3Y93_05460 2707b858d725b99ad05959eb624be969 229 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 C3Y93_05460 2707b858d725b99ad05959eb624be969 229 Pfam PF00633 Helix-hairpin-helix motif 100 127 5.7E-9 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 C3Y93_07655 da5f54ed0daed0bf8613e52425321880 496 Pfam PF00743 Flavin-binding monooxygenase-like 55 388 2.0E-13 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 C3Y93_07655 da5f54ed0daed0bf8613e52425321880 496 Gene3D G3DSA:3.50.50.60 3 155 1.3E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_07655 da5f54ed0daed0bf8613e52425321880 496 Gene3D G3DSA:3.50.50.60 156 246 7.5E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_07655 da5f54ed0daed0bf8613e52425321880 496 SUPERFAMILY SSF51905 1 301 1.1E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_07655 da5f54ed0daed0bf8613e52425321880 496 SUPERFAMILY SSF51905 281 415 1.8E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_07655 da5f54ed0daed0bf8613e52425321880 496 Gene3D G3DSA:3.50.50.60 300 479 2.6E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_04330 b3046dd128cacc8f2806376da8747a29 567 Gene3D G3DSA:2.60.40.3650 1 172 3.8E-51 T 14-10-2018 C3Y93_04330 b3046dd128cacc8f2806376da8747a29 567 Gene3D G3DSA:2.30.42.10 469 567 1.4E-15 T 14-10-2018 C3Y93_04330 b3046dd128cacc8f2806376da8747a29 567 Gene3D G3DSA:1.10.390.60 175 445 1.9E-99 T 14-10-2018 C3Y93_04330 b3046dd128cacc8f2806376da8747a29 567 PIRSF PIRSF016493 1 567 1.9E-194 T 14-10-2018 IPR024191 Peptidase M61 C3Y93_04330 b3046dd128cacc8f2806376da8747a29 567 Pfam PF05299 M61 glycyl aminopeptidase 268 384 5.4E-46 T 14-10-2018 IPR007963 Peptidase M61, catalytic domain C3Y93_04330 b3046dd128cacc8f2806376da8747a29 567 SUPERFAMILY SSF50156 463 537 3.06E-7 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3Y93_04330 b3046dd128cacc8f2806376da8747a29 567 SUPERFAMILY SSF55486 181 393 3.74E-13 T 14-10-2018 C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 TIGRFAM TIGR02063 RNase_R: ribonuclease R 22 714 3.2E-229 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 SUPERFAMILY SSF50249 632 715 1.44E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 Pfam PF08206 Ribonuclease B OB domain 91 140 6.0E-6 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 SMART SM00316 631 714 3.0E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 Pfam PF00575 S1 RNA binding domain 632 712 1.3E-9 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 82 713 1.3E-190 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 Hamap MF_01895 Ribonuclease R [rnr]. 41 714 49.54 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 Gene3D G3DSA:2.40.50.140 634 737 7.6E-20 T 14-10-2018 C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 SMART SM00955 262 588 8.7E-173 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 SUPERFAMILY SSF50249 139 240 1.46E-9 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 Pfam PF00773 RNB domain 262 587 7.3E-106 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 Gene3D G3DSA:2.40.50.140 70 148 7.9E-6 T 14-10-2018 C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 SUPERFAMILY SSF50249 73 148 1.71E-7 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_07600 d0ecbf80c0a6ff869823fc09b026695d 807 SUPERFAMILY SSF50249 230 631 9.71E-139 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_04370 455594b826b732bb38bcaee15cdc458f 369 Gene3D G3DSA:3.30.70.260 279 368 6.6E-28 T 14-10-2018 C3Y93_04370 455594b826b732bb38bcaee15cdc458f 369 Pfam PF01817 Chorismate mutase type II 18 96 1.9E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C3Y93_04370 455594b826b732bb38bcaee15cdc458f 369 SUPERFAMILY SSF48600 9 97 1.5E-19 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C3Y93_04370 455594b826b732bb38bcaee15cdc458f 369 SUPERFAMILY SSF55021 271 366 3.88E-27 T 14-10-2018 C3Y93_04370 455594b826b732bb38bcaee15cdc458f 369 SUPERFAMILY SSF53850 101 285 3.26E-61 T 14-10-2018 C3Y93_04370 455594b826b732bb38bcaee15cdc458f 369 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 252 274 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 C3Y93_04370 455594b826b732bb38bcaee15cdc458f 369 Pfam PF00800 Prephenate dehydratase 101 278 7.7E-63 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 C3Y93_04370 455594b826b732bb38bcaee15cdc458f 369 Gene3D G3DSA:1.20.59.10 14 100 1.2E-29 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C3Y93_04370 455594b826b732bb38bcaee15cdc458f 369 SMART SM00830 18 99 1.9E-27 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C3Y93_04370 455594b826b732bb38bcaee15cdc458f 369 TIGRFAM TIGR01807 CM_P2: chorismate mutase 14 89 1.9E-25 T 14-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 C3Y93_04370 455594b826b732bb38bcaee15cdc458f 369 PIRSF PIRSF001500 7 369 1.3E-135 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 C3Y93_04370 455594b826b732bb38bcaee15cdc458f 369 Gene3D G3DSA:3.40.190.10 181 265 6.0E-59 T 14-10-2018 C3Y93_04370 455594b826b732bb38bcaee15cdc458f 369 Gene3D G3DSA:3.40.190.10 103 274 6.0E-59 T 14-10-2018 C3Y93_04370 455594b826b732bb38bcaee15cdc458f 369 Pfam PF01842 ACT domain 287 351 2.8E-11 T 14-10-2018 IPR002912 ACT domain C3Y93_07875 7016c34f7c109f020f75599209208e3f 337 SUPERFAMILY SSF144083 272 335 1.16E-12 T 14-10-2018 C3Y93_07875 7016c34f7c109f020f75599209208e3f 337 Pfam PF01544 CorA-like Mg2+ transporter protein 27 332 1.5E-52 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 C3Y93_07875 7016c34f7c109f020f75599209208e3f 337 Gene3D G3DSA:1.20.58.340 261 337 3.0E-14 T 14-10-2018 C3Y93_07875 7016c34f7c109f020f75599209208e3f 337 SUPERFAMILY SSF143865 2 274 4.97E-36 T 14-10-2018 C3Y93_09615 e92efcd72b431923461529f571dd5c7f 238 Pfam PF13489 Methyltransferase domain 50 202 5.6E-26 T 14-10-2018 C3Y93_09615 e92efcd72b431923461529f571dd5c7f 238 SUPERFAMILY SSF53335 14 230 2.39E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_09615 e92efcd72b431923461529f571dd5c7f 238 Gene3D G3DSA:3.40.50.150 10 234 4.0E-78 T 14-10-2018 C3Y93_09615 e92efcd72b431923461529f571dd5c7f 238 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 10 229 9.9E-88 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 C3Y93_09615 e92efcd72b431923461529f571dd5c7f 238 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 10 235 37.199 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 C3Y93_13065 ec7ad3b88d5ab76c8145de36409df2ed 394 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 177 205 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 C3Y93_13065 ec7ad3b88d5ab76c8145de36409df2ed 394 SUPERFAMILY SSF56796 5 394 9.16E-111 T 14-10-2018 C3Y93_13065 ec7ad3b88d5ab76c8145de36409df2ed 394 Gene3D G3DSA:3.40.50.1970 1 188 1.7E-57 T 14-10-2018 C3Y93_13065 ec7ad3b88d5ab76c8145de36409df2ed 394 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 385 2.7E-108 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 C3Y93_13065 ec7ad3b88d5ab76c8145de36409df2ed 394 Gene3D G3DSA:1.20.1090.10 190 394 6.6E-57 T 14-10-2018 C3Y93_13065 ec7ad3b88d5ab76c8145de36409df2ed 394 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 C3Y93_00755 87f6f5e2e91a6183fe60059f7d1867d6 238 SUPERFAMILY SSF53335 47 235 2.67E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_00755 87f6f5e2e91a6183fe60059f7d1867d6 238 Pfam PF02390 Putative methyltransferase 64 230 8.5E-51 T 14-10-2018 C3Y93_00755 87f6f5e2e91a6183fe60059f7d1867d6 238 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 26 237 29.402 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 C3Y93_00755 87f6f5e2e91a6183fe60059f7d1867d6 238 Gene3D G3DSA:3.40.50.150 35 238 2.0E-59 T 14-10-2018 C3Y93_00755 87f6f5e2e91a6183fe60059f7d1867d6 238 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 59 237 1.6E-52 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 C3Y93_01155 5566bfa5d68d7f4e9aeddaca5c5f2805 651 Pfam PF14864 Alkyl sulfatase C-terminal 525 647 1.6E-17 T 14-10-2018 IPR029229 Alkyl sulfatase, C-terminal C3Y93_01155 5566bfa5d68d7f4e9aeddaca5c5f2805 651 SUPERFAMILY SSF55718 525 647 3.3E-22 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily C3Y93_01155 5566bfa5d68d7f4e9aeddaca5c5f2805 651 Gene3D G3DSA:1.25.40.880 376 516 4.1E-55 T 14-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily C3Y93_01155 5566bfa5d68d7f4e9aeddaca5c5f2805 651 Gene3D G3DSA:3.30.1050.10 518 649 4.6E-23 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily C3Y93_01155 5566bfa5d68d7f4e9aeddaca5c5f2805 651 SUPERFAMILY SSF56281 26 517 5.74E-141 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_01155 5566bfa5d68d7f4e9aeddaca5c5f2805 651 SMART SM00849 119 340 1.0E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_01155 5566bfa5d68d7f4e9aeddaca5c5f2805 651 Gene3D G3DSA:3.60.15.30 23 375 8.1E-147 T 14-10-2018 C3Y93_01155 5566bfa5d68d7f4e9aeddaca5c5f2805 651 Pfam PF00753 Metallo-beta-lactamase superfamily 115 326 4.5E-32 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_01155 5566bfa5d68d7f4e9aeddaca5c5f2805 651 Pfam PF14863 Alkyl sulfatase dimerisation 379 514 1.5E-54 T 14-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 C3Y93_01515 b074933c55dc3bc32cbeca4043f4c805 662 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 336 1.2E-163 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3Y93_01515 b074933c55dc3bc32cbeca4043f4c805 662 Pfam PF02780 Transketolase, C-terminal domain 551 653 3.1E-11 T 14-10-2018 IPR033248 Transketolase, C-terminal domain C3Y93_01515 b074933c55dc3bc32cbeca4043f4c805 662 SMART SM00861 357 527 1.1E-69 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C3Y93_01515 b074933c55dc3bc32cbeca4043f4c805 662 Gene3D G3DSA:3.40.50.920 540 661 4.5E-37 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3Y93_01515 b074933c55dc3bc32cbeca4043f4c805 662 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 661 3.4E-292 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 C3Y93_01515 b074933c55dc3bc32cbeca4043f4c805 662 SUPERFAMILY SSF52518 7 322 5.33E-120 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3Y93_01515 b074933c55dc3bc32cbeca4043f4c805 662 Gene3D G3DSA:3.40.50.970 329 539 1.8E-82 T 14-10-2018 C3Y93_01515 b074933c55dc3bc32cbeca4043f4c805 662 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3Y93_01515 b074933c55dc3bc32cbeca4043f4c805 662 ProSitePatterns PS00802 Transketolase signature 2. 469 485 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3Y93_01515 b074933c55dc3bc32cbeca4043f4c805 662 Pfam PF02779 Transketolase, pyrimidine binding domain 356 526 5.6E-46 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C3Y93_01515 b074933c55dc3bc32cbeca4043f4c805 662 Gene3D G3DSA:3.40.50.970 6 328 1.6E-130 T 14-10-2018 C3Y93_01515 b074933c55dc3bc32cbeca4043f4c805 662 SUPERFAMILY SSF52922 534 661 4.14E-38 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3Y93_01515 b074933c55dc3bc32cbeca4043f4c805 662 SUPERFAMILY SSF52518 336 527 2.85E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3Y93_03310 b35f55ff4c4009b87ae06a20cb516d03 436 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 80 188 3.0E-18 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3Y93_03310 b35f55ff4c4009b87ae06a20cb516d03 436 Gene3D G3DSA:1.20.140.10 303 434 6.0E-37 T 14-10-2018 C3Y93_03310 b35f55ff4c4009b87ae06a20cb516d03 436 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 306 430 3.8E-30 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3Y93_03310 b35f55ff4c4009b87ae06a20cb516d03 436 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 404 423 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 C3Y93_03310 b35f55ff4c4009b87ae06a20cb516d03 436 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 204 290 4.8E-9 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3Y93_03310 b35f55ff4c4009b87ae06a20cb516d03 436 SUPERFAMILY SSF47203 306 430 5.32E-37 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3Y93_03310 b35f55ff4c4009b87ae06a20cb516d03 436 SUPERFAMILY SSF56645 75 291 4.97E-34 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3Y93_03310 b35f55ff4c4009b87ae06a20cb516d03 436 Gene3D G3DSA:1.10.540.10 68 193 4.1E-22 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3Y93_03310 b35f55ff4c4009b87ae06a20cb516d03 436 Gene3D G3DSA:2.40.110.10 203 296 8.1E-12 T 14-10-2018 C3Y93_01240 908724bb93906624cfbd0ba8ae4abf7a 709 Gene3D G3DSA:3.40.50.300 466 709 6.8E-68 T 14-10-2018 C3Y93_01240 908724bb93906624cfbd0ba8ae4abf7a 709 SUPERFAMILY SSF90123 141 456 5.36E-58 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3Y93_01240 908724bb93906624cfbd0ba8ae4abf7a 709 ProSitePatterns PS00211 ABC transporters family signature. 612 626 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_01240 908724bb93906624cfbd0ba8ae4abf7a 709 Pfam PF00664 ABC transporter transmembrane region 161 426 7.7E-29 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 C3Y93_01240 908724bb93906624cfbd0ba8ae4abf7a 709 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 8 702 1.7E-256 T 14-10-2018 IPR017750 ATPase, type I secretion system C3Y93_01240 908724bb93906624cfbd0ba8ae4abf7a 709 Pfam PF00005 ABC transporter 495 640 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_01240 908724bb93906624cfbd0ba8ae4abf7a 709 Gene3D G3DSA:1.20.1560.10 145 457 6.0E-61 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3Y93_01240 908724bb93906624cfbd0ba8ae4abf7a 709 SMART SM00382 500 686 5.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_01240 908724bb93906624cfbd0ba8ae4abf7a 709 SUPERFAMILY SSF52540 464 699 1.15E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01240 908724bb93906624cfbd0ba8ae4abf7a 709 Gene3D G3DSA:3.90.70.10 4 127 7.9E-16 T 14-10-2018 C3Y93_06285 4c7d45994128740e6268c325e2c2441d 1062 SMART SM00843 1000 1062 7.5E-30 T 14-10-2018 IPR018541 FtsK gamma domain C3Y93_06285 4c7d45994128740e6268c325e2c2441d 1062 Gene3D G3DSA:3.40.50.300 679 982 8.3E-112 T 14-10-2018 C3Y93_06285 4c7d45994128740e6268c325e2c2441d 1062 Pfam PF01580 FtsK/SpoIIIE family 682 896 1.3E-63 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 C3Y93_06285 4c7d45994128740e6268c325e2c2441d 1062 SUPERFAMILY SSF52540 656 969 7.18E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_06285 4c7d45994128740e6268c325e2c2441d 1062 Gene3D G3DSA:1.10.10.10 994 1061 3.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_06285 4c7d45994128740e6268c325e2c2441d 1062 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 13 172 5.2E-28 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region C3Y93_06285 4c7d45994128740e6268c325e2c2441d 1062 Pfam PF09397 Ftsk gamma domain 1002 1062 1.4E-25 T 14-10-2018 IPR018541 FtsK gamma domain C3Y93_06285 4c7d45994128740e6268c325e2c2441d 1062 SUPERFAMILY SSF46785 1001 1062 5.65E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_06285 4c7d45994128740e6268c325e2c2441d 1062 Gene3D G3DSA:3.30.980.40 573 678 1.0E-32 T 14-10-2018 C3Y93_10865 6bfb7b776331431e4d7144b4a236d5df 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 347 5.2E-75 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 C3Y93_10865 6bfb7b776331431e4d7144b4a236d5df 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 344 3.1E-95 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 SUPERFAMILY SSF51905 2 370 1.47E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 SUPERFAMILY SSF55424 343 465 6.01E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 326 5.7E-67 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PIRSF PIRSF000350 1 463 1.0E-88 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 8.5E-36 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 466 1.3E-166 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 Gene3D G3DSA:3.30.390.30 347 466 1.1E-41 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 Gene3D G3DSA:3.50.50.60 156 277 7.8E-113 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 Gene3D G3DSA:3.50.50.60 6 333 7.8E-113 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 2.8E-38 T 14-10-2018 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 2.8E-38 T 14-10-2018 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.8E-38 T 14-10-2018 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 2.8E-38 T 14-10-2018 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.8E-38 T 14-10-2018 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.2E-67 T 14-10-2018 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.2E-67 T 14-10-2018 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.2E-67 T 14-10-2018 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 2.2E-67 T 14-10-2018 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 2.2E-67 T 14-10-2018 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.2E-67 T 14-10-2018 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.2E-67 T 14-10-2018 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 2.2E-67 T 14-10-2018 C3Y93_02460 9f9ab28901a1d2e0d225cccbb2a0f628 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 2.2E-67 T 14-10-2018 C3Y93_01510 014f7205221ed4a36cb04150cef7d7bc 388 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3Y93_01510 014f7205221ed4a36cb04150cef7d7bc 388 SUPERFAMILY SSF55973 111 233 6.28E-50 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3Y93_01510 014f7205221ed4a36cb04150cef7d7bc 388 SUPERFAMILY SSF55973 234 386 4.32E-68 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3Y93_01510 014f7205221ed4a36cb04150cef7d7bc 388 Gene3D G3DSA:3.30.300.10 103 378 4.4E-174 T 14-10-2018 C3Y93_01510 014f7205221ed4a36cb04150cef7d7bc 388 PIRSF PIRSF000497 1 387 2.1E-171 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3Y93_01510 014f7205221ed4a36cb04150cef7d7bc 388 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 2.2E-44 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3Y93_01510 014f7205221ed4a36cb04150cef7d7bc 388 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 102 3.7E-42 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3Y93_01510 014f7205221ed4a36cb04150cef7d7bc 388 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 56.871 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3Y93_01510 014f7205221ed4a36cb04150cef7d7bc 388 Gene3D G3DSA:3.30.300.10 12 271 4.4E-174 T 14-10-2018 C3Y93_01510 014f7205221ed4a36cb04150cef7d7bc 388 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 375 6.9E-67 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3Y93_01510 014f7205221ed4a36cb04150cef7d7bc 388 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3Y93_01510 014f7205221ed4a36cb04150cef7d7bc 388 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 384 9.3E-187 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3Y93_01510 014f7205221ed4a36cb04150cef7d7bc 388 Gene3D G3DSA:3.30.300.10 6 234 4.4E-174 T 14-10-2018 C3Y93_01510 014f7205221ed4a36cb04150cef7d7bc 388 SUPERFAMILY SSF55973 6 110 3.41E-46 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C3Y93_10425 905dd0f2f4065d9b58387ca604ad58a8 569 Pfam PF00474 Sodium:solute symporter family 66 487 4.5E-111 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 C3Y93_10425 905dd0f2f4065d9b58387ca604ad58a8 569 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 66 487 1.8E-61 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 C3Y93_10425 905dd0f2f4065d9b58387ca604ad58a8 569 Gene3D G3DSA:1.20.1730.10 53 567 2.1E-60 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily C3Y93_10425 905dd0f2f4065d9b58387ca604ad58a8 569 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 181 206 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site C3Y93_02260 2744cc7021b1765ed6d718555d1c6222 368 Pfam PF02881 SRP54-type protein, helical bundle domain 84 145 4.9E-11 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3Y93_02260 2744cc7021b1765ed6d718555d1c6222 368 SMART SM00962 164 365 1.7E-120 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3Y93_02260 2744cc7021b1765ed6d718555d1c6222 368 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 92 365 60.082 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 C3Y93_02260 2744cc7021b1765ed6d718555d1c6222 368 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 338 351 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3Y93_02260 2744cc7021b1765ed6d718555d1c6222 368 Pfam PF00448 SRP54-type protein, GTPase domain 165 364 1.7E-76 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3Y93_02260 2744cc7021b1765ed6d718555d1c6222 368 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 93 364 5.5E-107 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 C3Y93_02260 2744cc7021b1765ed6d718555d1c6222 368 SUPERFAMILY SSF47364 63 143 1.28E-19 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 C3Y93_02260 2744cc7021b1765ed6d718555d1c6222 368 Gene3D G3DSA:3.40.50.300 161 353 1.2E-114 T 14-10-2018 C3Y93_02260 2744cc7021b1765ed6d718555d1c6222 368 SMART SM00963 68 149 2.6E-24 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3Y93_02260 2744cc7021b1765ed6d718555d1c6222 368 SMART SM00382 163 343 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_02260 2744cc7021b1765ed6d718555d1c6222 368 Gene3D G3DSA:1.20.120.140 65 363 1.2E-114 T 14-10-2018 C3Y93_02260 2744cc7021b1765ed6d718555d1c6222 368 SUPERFAMILY SSF52540 162 365 4.78E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_10075 0082f4f1998dd13cc623cb430b545e1e 553 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 111 323 5.4E-43 T 14-10-2018 IPR000477 Reverse transcriptase domain C3Y93_10075 0082f4f1998dd13cc623cb430b545e1e 553 Pfam PF13655 N-terminal domain of reverse transcriptase 15 96 5.5E-30 T 14-10-2018 IPR025960 Reverse transcriptase, N-terminal domain C3Y93_10075 0082f4f1998dd13cc623cb430b545e1e 553 SUPERFAMILY SSF56672 81 411 7.12E-52 T 14-10-2018 C3Y93_10075 0082f4f1998dd13cc623cb430b545e1e 553 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 60 405 8.3E-111 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase C3Y93_10075 0082f4f1998dd13cc623cb430b545e1e 553 Pfam PF08388 Group II intron, maturase-specific domain 341 418 7.1E-26 T 14-10-2018 IPR013597 Group II intron, maturase-specific C3Y93_07645 4a5a6fe51033c1c75d832b21a50b4fb5 85 SUPERFAMILY SSF109910 7 81 1.14E-19 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily C3Y93_07645 4a5a6fe51033c1c75d832b21a50b4fb5 85 Pfam PF03937 Flavinator of succinate dehydrogenase 10 79 1.5E-19 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase C3Y93_07645 4a5a6fe51033c1c75d832b21a50b4fb5 85 Gene3D G3DSA:1.10.150.250 3 84 8.6E-23 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily C3Y93_10910 af413a429ee3136e07e33e0941696653 434 SUPERFAMILY SSF55347 136 301 1.96E-53 T 14-10-2018 C3Y93_10910 af413a429ee3136e07e33e0941696653 434 Pfam PF01842 ACT domain 353 418 3.4E-12 T 14-10-2018 IPR002912 ACT domain C3Y93_10910 af413a429ee3136e07e33e0941696653 434 Gene3D G3DSA:3.30.360.10 135 347 1.9E-160 T 14-10-2018 C3Y93_10910 af413a429ee3136e07e33e0941696653 434 Gene3D G3DSA:3.30.70.260 348 420 1.9E-160 T 14-10-2018 C3Y93_10910 af413a429ee3136e07e33e0941696653 434 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 182 204 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 C3Y93_10910 af413a429ee3136e07e33e0941696653 434 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 128 4.2E-20 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 C3Y93_10910 af413a429ee3136e07e33e0941696653 434 Gene3D G3DSA:3.40.50.720 4 339 1.9E-160 T 14-10-2018 C3Y93_10910 af413a429ee3136e07e33e0941696653 434 SUPERFAMILY SSF51735 2 157 5.35E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_10910 af413a429ee3136e07e33e0941696653 434 SUPERFAMILY SSF55021 351 421 8.09E-12 T 14-10-2018 C3Y93_10910 af413a429ee3136e07e33e0941696653 434 Pfam PF00742 Homoserine dehydrogenase 136 314 1.5E-64 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 C3Y93_10910 af413a429ee3136e07e33e0941696653 434 PIRSF PIRSF000098 1 432 6.2E-161 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 C3Y93_05685 b3412d85057c301bdd6de6042a0e1e49 377 Gene3D G3DSA:3.30.70.360 181 294 1.3E-133 T 14-10-2018 C3Y93_05685 b3412d85057c301bdd6de6042a0e1e49 377 Pfam PF01546 Peptidase family M20/M25/M40 64 373 4.4E-45 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 C3Y93_05685 b3412d85057c301bdd6de6042a0e1e49 377 SUPERFAMILY SSF53187 5 375 1.39E-65 T 14-10-2018 C3Y93_05685 b3412d85057c301bdd6de6042a0e1e49 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.503 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 C3Y93_05685 b3412d85057c301bdd6de6042a0e1e49 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 8 374 7.4E-170 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 C3Y93_05685 b3412d85057c301bdd6de6042a0e1e49 377 Gene3D G3DSA:3.40.630.10 12 364 1.3E-133 T 14-10-2018 C3Y93_05685 b3412d85057c301bdd6de6042a0e1e49 377 SUPERFAMILY SSF55031 181 290 2.99E-32 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain C3Y93_05685 b3412d85057c301bdd6de6042a0e1e49 377 Pfam PF07687 Peptidase dimerisation domain 177 284 1.6E-24 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain C3Y93_00490 711caafbb735b28a4303a3b53b95b28a 330 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 317 7.5E-91 T 14-10-2018 IPR016833 Putative sodium bile acid cotransporter C3Y93_00490 711caafbb735b28a4303a3b53b95b28a 330 PIRSF PIRSF026166 1 330 7.3E-123 T 14-10-2018 IPR016833 Putative sodium bile acid cotransporter C3Y93_00490 711caafbb735b28a4303a3b53b95b28a 330 Gene3D G3DSA:1.20.1530.20 6 325 7.6E-29 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily C3Y93_12775 5af081273a94b5e85809d27ac2b718cb 1154 PIRSF PIRSF005719 1 1149 4.4E-236 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein C3Y93_12775 5af081273a94b5e85809d27ac2b718cb 1154 Gene3D G3DSA:3.40.50.300 1 263 3.8E-53 T 14-10-2018 C3Y93_12775 5af081273a94b5e85809d27ac2b718cb 1154 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1144 21.288 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 C3Y93_12775 5af081273a94b5e85809d27ac2b718cb 1154 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 137 6.4E-34 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal C3Y93_12775 5af081273a94b5e85809d27ac2b718cb 1154 Gene3D G3DSA:3.40.50.300 916 1150 4.8E-46 T 14-10-2018 C3Y93_12775 5af081273a94b5e85809d27ac2b718cb 1154 SUPERFAMILY SSF52540 1 426 1.27E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_12775 5af081273a94b5e85809d27ac2b718cb 1154 SUPERFAMILY SSF57997 651 829 1.18E-7 T 14-10-2018 C3Y93_12775 5af081273a94b5e85809d27ac2b718cb 1154 SUPERFAMILY SSF52540 1 1145 1.87E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_12775 5af081273a94b5e85809d27ac2b718cb 1154 Pfam PF02463 RecF/RecN/SMC N terminal domain 459 1135 2.2E-20 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal C3Y93_12775 5af081273a94b5e85809d27ac2b718cb 1154 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1142 1.1E-280 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 C3Y93_07715 108c3ab9515aa560be910d3fd46f973d 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07715 108c3ab9515aa560be910d3fd46f973d 177 PIRSF PIRSF002162 1 177 1.6E-43 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07715 108c3ab9515aa560be910d3fd46f973d 177 Gene3D G3DSA:3.90.930.12 1 82 3.1E-27 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07715 108c3ab9515aa560be910d3fd46f973d 177 SUPERFAMILY SSF56053 83 177 1.2E-34 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07715 108c3ab9515aa560be910d3fd46f973d 177 Gene3D G3DSA:3.90.930.12 83 177 1.4E-37 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07715 108c3ab9515aa560be910d3fd46f973d 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.323 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C3Y93_07715 108c3ab9515aa560be910d3fd46f973d 177 SUPERFAMILY SSF56053 1 82 8.15E-23 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07715 108c3ab9515aa560be910d3fd46f973d 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.3E-71 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C3Y93_07715 108c3ab9515aa560be910d3fd46f973d 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 4.8E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C3Y93_07715 108c3ab9515aa560be910d3fd46f973d 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 4.8E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C3Y93_07715 108c3ab9515aa560be910d3fd46f973d 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 4.8E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C3Y93_07715 108c3ab9515aa560be910d3fd46f973d 177 Pfam PF00347 Ribosomal protein L6 90 164 2.0E-17 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07715 108c3ab9515aa560be910d3fd46f973d 177 Pfam PF00347 Ribosomal protein L6 11 82 2.1E-14 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_00335 9e3b6a7555ace9330c13829b50dcc3fb 404 Pfam PF01926 50S ribosome-binding GTPase 161 284 4.1E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_00335 9e3b6a7555ace9330c13829b50dcc3fb 404 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 C3Y93_00335 9e3b6a7555ace9330c13829b50dcc3fb 404 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.9E-141 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 C3Y93_00335 9e3b6a7555ace9330c13829b50dcc3fb 404 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.887 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 C3Y93_00335 9e3b6a7555ace9330c13829b50dcc3fb 404 SUPERFAMILY SSF52540 151 337 2.97E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00335 9e3b6a7555ace9330c13829b50dcc3fb 404 SUPERFAMILY SSF82051 3 158 6.41E-56 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily C3Y93_00335 9e3b6a7555ace9330c13829b50dcc3fb 404 Pfam PF01018 GTP1/OBG 4 158 9.4E-59 T 14-10-2018 IPR006169 GTP1/OBG domain C3Y93_00335 9e3b6a7555ace9330c13829b50dcc3fb 404 PIRSF PIRSF002401 1 380 1.8E-135 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type C3Y93_00335 9e3b6a7555ace9330c13829b50dcc3fb 404 Gene3D G3DSA:3.40.50.300 159 340 2.7E-48 T 14-10-2018 C3Y93_00335 9e3b6a7555ace9330c13829b50dcc3fb 404 Gene3D G3DSA:2.70.210.12 1 158 1.7E-59 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily C3Y93_00335 9e3b6a7555ace9330c13829b50dcc3fb 404 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.3E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_00335 9e3b6a7555ace9330c13829b50dcc3fb 404 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.3E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_00335 9e3b6a7555ace9330c13829b50dcc3fb 404 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.3E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_00335 9e3b6a7555ace9330c13829b50dcc3fb 404 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.3E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_08455 0a9331922c3b72e7d93638f28235e15a 243 Pfam PF00977 Histidine biosynthesis protein 3 229 2.2E-78 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 C3Y93_08455 0a9331922c3b72e7d93638f28235e15a 243 SUPERFAMILY SSF51366 1 235 1.18E-74 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3Y93_08455 0a9331922c3b72e7d93638f28235e15a 243 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 237 35.817 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 C3Y93_08455 0a9331922c3b72e7d93638f28235e15a 243 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 233 2.2E-79 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 C3Y93_08455 0a9331922c3b72e7d93638f28235e15a 243 Gene3D G3DSA:3.20.20.70 2 241 1.9E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_11705 6d956e45fbb18a4fac940e70df4bdaec 367 SMART SM00116 312 359 8.5E-8 T 14-10-2018 IPR000644 CBS domain C3Y93_11705 6d956e45fbb18a4fac940e70df4bdaec 367 SMART SM00116 244 292 0.2 T 14-10-2018 IPR000644 CBS domain C3Y93_11705 6d956e45fbb18a4fac940e70df4bdaec 367 Pfam PF04982 HPP family 54 173 7.4E-37 T 14-10-2018 IPR007065 HPP C3Y93_11705 6d956e45fbb18a4fac940e70df4bdaec 367 Gene3D G3DSA:3.10.580.10 301 367 5.0E-13 T 14-10-2018 C3Y93_11705 6d956e45fbb18a4fac940e70df4bdaec 367 Gene3D G3DSA:3.10.580.10 201 296 7.1E-12 T 14-10-2018 C3Y93_11705 6d956e45fbb18a4fac940e70df4bdaec 367 Pfam PF00571 CBS domain 238 290 1.2E-6 T 14-10-2018 IPR000644 CBS domain C3Y93_11705 6d956e45fbb18a4fac940e70df4bdaec 367 Pfam PF00571 CBS domain 305 358 6.3E-10 T 14-10-2018 IPR000644 CBS domain C3Y93_11705 6d956e45fbb18a4fac940e70df4bdaec 367 SUPERFAMILY SSF54631 232 358 2.24E-26 T 14-10-2018 C3Y93_07445 9097290bbc05aee1d318ed166de188dd 436 SMART SM01086 316 410 5.2E-36 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3Y93_07445 9097290bbc05aee1d318ed166de188dd 436 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 409 3.1E-205 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 C3Y93_07445 9097290bbc05aee1d318ed166de188dd 436 Gene3D G3DSA:1.10.8.60 315 423 3.2E-38 T 14-10-2018 C3Y93_07445 9097290bbc05aee1d318ed166de188dd 436 SUPERFAMILY SSF57716 9 44 1.71E-10 T 14-10-2018 C3Y93_07445 9097290bbc05aee1d318ed166de188dd 436 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 414 52.35 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 C3Y93_07445 9097290bbc05aee1d318ed166de188dd 436 SUPERFAMILY SSF52540 60 402 1.64E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_07445 9097290bbc05aee1d318ed166de188dd 436 SMART SM00382 111 332 1.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_07445 9097290bbc05aee1d318ed166de188dd 436 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 316 391 2.1E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3Y93_07445 9097290bbc05aee1d318ed166de188dd 436 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 4.7E-51 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3Y93_07445 9097290bbc05aee1d318ed166de188dd 436 Gene3D G3DSA:3.40.50.300 54 314 3.7E-111 T 14-10-2018 C3Y93_07445 9097290bbc05aee1d318ed166de188dd 436 SMART SM00994 8 47 1.4E-19 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 C3Y93_07445 9097290bbc05aee1d318ed166de188dd 436 Gene3D G3DSA:3.30.50.30 2 47 9.4E-17 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily C3Y93_07445 9097290bbc05aee1d318ed166de188dd 436 Pfam PF06689 ClpX C4-type zinc finger 9 45 1.8E-17 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 SUPERFAMILY SSF52317 8 234 8.29E-59 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 SUPERFAMILY SSF54810 402 522 3.01E-47 T 14-10-2018 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 Gene3D G3DSA:3.30.300.10 403 522 2.7E-48 T 14-10-2018 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 Pfam PF00958 GMP synthase C terminal domain 430 521 2.2E-39 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 83 99 4.6E-5 T 14-10-2018 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 12 26 4.6E-5 T 14-10-2018 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 53 67 4.6E-5 T 14-10-2018 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 9 522 55.374 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 Gene3D G3DSA:3.40.50.880 11 203 1.5E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 210 522 1.1E-145 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 Gene3D G3DSA:3.40.50.620 206 402 4.9E-77 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 12 201 7.7E-79 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 56 65 3.5E-7 T 14-10-2018 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 83 94 3.5E-7 T 14-10-2018 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 3.5E-7 T 14-10-2018 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 Pfam PF02540 NAD synthase 216 291 1.0E-8 T 14-10-2018 IPR022310 NAD/GMP synthase C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 Pfam PF00117 Glutamine amidotransferase class-I 14 197 5.2E-39 T 14-10-2018 IPR017926 Glutamine amidotransferase C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 SUPERFAMILY SSF52402 194 417 5.95E-60 T 14-10-2018 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 PRINTS PR00097 Anthranilate synthase component II signature 56 65 5.8E-6 T 14-10-2018 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 PRINTS PR00097 Anthranilate synthase component II signature 83 94 5.8E-6 T 14-10-2018 C3Y93_10365 985cdc587004e6318ba50ab4d6c6b7a5 522 PRINTS PR00097 Anthranilate synthase component II signature 174 187 5.8E-6 T 14-10-2018 C3Y93_13130 3c0c8bfabc7db201d4fe78216277c12f 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 5.9E-46 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 C3Y93_13130 3c0c8bfabc7db201d4fe78216277c12f 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 8.0E-62 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 C3Y93_13130 3c0c8bfabc7db201d4fe78216277c12f 126 SUPERFAMILY SSF50692 1 122 5.84E-46 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily C3Y93_13130 3c0c8bfabc7db201d4fe78216277c12f 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.2E-45 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 C3Y93_13130 3c0c8bfabc7db201d4fe78216277c12f 126 PIRSF PIRSF006246 1 124 2.3E-46 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 C3Y93_13130 3c0c8bfabc7db201d4fe78216277c12f 126 Gene3D G3DSA:2.40.40.20 1 126 2.6E-51 T 14-10-2018 C3Y93_13130 3c0c8bfabc7db201d4fe78216277c12f 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 64.435 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 C3Y93_07235 3f3050c07b83b10a7b425b63bc460ec9 463 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 107 456 2.1E-30 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 C3Y93_07235 3f3050c07b83b10a7b425b63bc460ec9 463 SUPERFAMILY SSF50249 7 75 9.71E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_07235 3f3050c07b83b10a7b425b63bc460ec9 463 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 439 449 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site C3Y93_07235 3f3050c07b83b10a7b425b63bc460ec9 463 SUPERFAMILY SSF53335 85 456 2.22E-79 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_07235 3f3050c07b83b10a7b425b63bc460ec9 463 Gene3D G3DSA:2.40.50.140 2 96 2.5E-22 T 14-10-2018 C3Y93_07235 3f3050c07b83b10a7b425b63bc460ec9 463 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 16 457 66.976 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 C3Y93_07235 3f3050c07b83b10a7b425b63bc460ec9 463 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 40 449 1.4E-100 T 14-10-2018 C3Y93_07235 3f3050c07b83b10a7b425b63bc460ec9 463 Gene3D G3DSA:3.40.50.150 97 451 2.4E-108 T 14-10-2018 C3Y93_07235 3f3050c07b83b10a7b425b63bc460ec9 463 Gene3D G3DSA:3.40.1350.30 144 286 2.4E-108 T 14-10-2018 C3Y93_07235 3f3050c07b83b10a7b425b63bc460ec9 463 Pfam PF01938 TRAM domain 18 69 3.4E-7 T 14-10-2018 IPR002792 TRAM domain C3Y93_07235 3f3050c07b83b10a7b425b63bc460ec9 463 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 388 418 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site C3Y93_08015 7500c958a1de1e98eceaf564516657f0 157 Pfam PF10107 Endonuclease related to archaeal Holliday junction resolvase 39 150 4.4E-26 T 14-10-2018 IPR019287 Holliday junction resolvase-related domain C3Y93_08605 2377a6356787e7720abe6aa747da78d2 497 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 28 215 1.4E-10 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 C3Y93_08605 2377a6356787e7720abe6aa747da78d2 497 SUPERFAMILY SSF52402 14 214 7.45E-25 T 14-10-2018 C3Y93_08605 2377a6356787e7720abe6aa747da78d2 497 TIGRFAM TIGR03183 DNA_S_dndC: putative sulfurtransferase DndC 14 447 2.0E-172 T 14-10-2018 IPR017598 Sulphur transferase DndC, putative C3Y93_08605 2377a6356787e7720abe6aa747da78d2 497 Gene3D G3DSA:3.40.50.620 5 266 1.1E-42 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_09540 5c67bfb33880b330593bcb5669daed5a 120 Gene3D G3DSA:3.30.428.10 1 117 6.8E-25 T 14-10-2018 IPR036265 HIT-like superfamily C3Y93_09540 5c67bfb33880b330593bcb5669daed5a 120 SUPERFAMILY SSF54197 2 115 2.78E-24 T 14-10-2018 IPR036265 HIT-like superfamily C3Y93_09540 5c67bfb33880b330593bcb5669daed5a 120 Pfam PF01230 HIT domain 15 104 6.6E-10 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3Y93_01670 4fc72f372e3f2fdf2a11c77fc74e7e91 575 Gene3D G3DSA:3.40.50.300 327 575 2.2E-93 T 14-10-2018 C3Y93_01670 4fc72f372e3f2fdf2a11c77fc74e7e91 575 SMART SM00382 360 547 2.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_01670 4fc72f372e3f2fdf2a11c77fc74e7e91 575 SUPERFAMILY SSF90123 9 321 3.79E-69 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3Y93_01670 4fc72f372e3f2fdf2a11c77fc74e7e91 575 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 8 574 3.8E-205 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 C3Y93_01670 4fc72f372e3f2fdf2a11c77fc74e7e91 575 Pfam PF00664 ABC transporter transmembrane region 23 291 6.7E-48 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 C3Y93_01670 4fc72f372e3f2fdf2a11c77fc74e7e91 575 Gene3D G3DSA:1.20.1560.10 1 324 2.1E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3Y93_01670 4fc72f372e3f2fdf2a11c77fc74e7e91 575 Pfam PF00005 ABC transporter 352 501 5.1E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_01670 4fc72f372e3f2fdf2a11c77fc74e7e91 575 SUPERFAMILY SSF52540 324 570 2.72E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01670 4fc72f372e3f2fdf2a11c77fc74e7e91 575 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_09580 8035a33c405410a14aae68c92cfb6673 513 PIRSF PIRSF002869 1 511 9.9E-154 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3Y93_09580 8035a33c405410a14aae68c92cfb6673 513 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 474 19.609 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3Y93_09580 8035a33c405410a14aae68c92cfb6673 513 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 503 9.0E-132 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3Y93_09580 8035a33c405410a14aae68c92cfb6673 513 PRINTS PR01806 Virulence factor MviN signature 416 433 2.2E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3Y93_09580 8035a33c405410a14aae68c92cfb6673 513 PRINTS PR01806 Virulence factor MviN signature 52 68 2.2E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3Y93_09580 8035a33c405410a14aae68c92cfb6673 513 PRINTS PR01806 Virulence factor MviN signature 133 157 2.2E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3Y93_09580 8035a33c405410a14aae68c92cfb6673 513 PRINTS PR01806 Virulence factor MviN signature 357 376 2.2E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3Y93_09580 8035a33c405410a14aae68c92cfb6673 513 PRINTS PR01806 Virulence factor MviN signature 33 52 2.2E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3Y93_09580 8035a33c405410a14aae68c92cfb6673 513 PRINTS PR01806 Virulence factor MviN signature 157 178 2.2E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3Y93_09580 8035a33c405410a14aae68c92cfb6673 513 PRINTS PR01806 Virulence factor MviN signature 259 285 2.2E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3Y93_09580 8035a33c405410a14aae68c92cfb6673 513 Pfam PF03023 MviN-like protein 30 474 3.4E-131 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C3Y93_12615 28efd1f9c5c67cc83a809f3ccf102ef6 358 PRINTS PR01021 OMPA domain signature 244 266 5.1E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_12615 28efd1f9c5c67cc83a809f3ccf102ef6 358 PRINTS PR01021 OMPA domain signature 289 305 5.1E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_12615 28efd1f9c5c67cc83a809f3ccf102ef6 358 PRINTS PR01021 OMPA domain signature 274 289 5.1E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_12615 28efd1f9c5c67cc83a809f3ccf102ef6 358 Gene3D G3DSA:3.30.1330.60 228 349 3.8E-44 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3Y93_12615 28efd1f9c5c67cc83a809f3ccf102ef6 358 Pfam PF13505 Outer membrane protein beta-barrel domain 7 200 8.9E-12 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel C3Y93_12615 28efd1f9c5c67cc83a809f3ccf102ef6 358 Pfam PF00691 OmpA family 243 339 2.9E-23 T 14-10-2018 IPR006665 OmpA-like domain C3Y93_12615 28efd1f9c5c67cc83a809f3ccf102ef6 358 SUPERFAMILY SSF103088 220 343 6.15E-34 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3Y93_12615 28efd1f9c5c67cc83a809f3ccf102ef6 358 SUPERFAMILY SSF56925 30 207 2.41E-17 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel C3Y93_12615 28efd1f9c5c67cc83a809f3ccf102ef6 358 Gene3D G3DSA:2.40.160.20 16 202 3.0E-16 T 14-10-2018 C3Y93_06785 03d35ab8cf2d403dedeb243e33d002a9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06785 03d35ab8cf2d403dedeb243e33d002a9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06785 03d35ab8cf2d403dedeb243e33d002a9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06785 03d35ab8cf2d403dedeb243e33d002a9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06785 03d35ab8cf2d403dedeb243e33d002a9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.4E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06785 03d35ab8cf2d403dedeb243e33d002a9 257 Gene3D G3DSA:3.40.50.720 2 246 1.1E-57 T 14-10-2018 C3Y93_06785 03d35ab8cf2d403dedeb243e33d002a9 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 5.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06785 03d35ab8cf2d403dedeb243e33d002a9 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 5.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06785 03d35ab8cf2d403dedeb243e33d002a9 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 5.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06785 03d35ab8cf2d403dedeb243e33d002a9 257 Pfam PF00106 short chain dehydrogenase 4 189 5.5E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06785 03d35ab8cf2d403dedeb243e33d002a9 257 SUPERFAMILY SSF51735 4 227 3.49E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_06055 3301e8de538d9b703161f8d118c87aa3 452 Pfam PF00743 Flavin-binding monooxygenase-like 243 378 2.8E-12 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 C3Y93_06055 3301e8de538d9b703161f8d118c87aa3 452 Pfam PF00743 Flavin-binding monooxygenase-like 3 225 2.2E-31 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 C3Y93_06055 3301e8de538d9b703161f8d118c87aa3 452 SUPERFAMILY SSF51905 3 241 3.02E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_06055 3301e8de538d9b703161f8d118c87aa3 452 Gene3D G3DSA:3.50.50.60 3 415 1.8E-166 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_06055 3301e8de538d9b703161f8d118c87aa3 452 SUPERFAMILY SSF51905 253 354 3.63E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_06055 3301e8de538d9b703161f8d118c87aa3 452 PIRSF PIRSF000332 240 403 4.0E-13 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 C3Y93_06055 3301e8de538d9b703161f8d118c87aa3 452 PIRSF PIRSF000332 1 233 1.0E-35 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 C3Y93_06055 3301e8de538d9b703161f8d118c87aa3 452 Gene3D G3DSA:3.50.50.60 172 271 1.8E-166 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_02035 f5c1a762ef8241150d7d6b4339d4fe02 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 2.0E-27 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_02035 f5c1a762ef8241150d7d6b4339d4fe02 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 88 3.0E-29 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_02035 f5c1a762ef8241150d7d6b4339d4fe02 89 SUPERFAMILY SSF46992 3 86 8.11E-31 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_02035 f5c1a762ef8241150d7d6b4339d4fe02 89 Pfam PF01649 Ribosomal protein S20 2 84 2.9E-25 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_02035 f5c1a762ef8241150d7d6b4339d4fe02 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.684 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_02035 f5c1a762ef8241150d7d6b4339d4fe02 89 Gene3D G3DSA:1.20.58.110 1 87 3.9E-27 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_06495 c7d65dd88cbd17aea2e1cb17c39b2c73 362 SUPERFAMILY SSF53383 27 357 1.63E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_06495 c7d65dd88cbd17aea2e1cb17c39b2c73 362 Pfam PF00155 Aminotransferase class I and II 31 355 1.9E-54 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3Y93_06495 c7d65dd88cbd17aea2e1cb17c39b2c73 362 Gene3D G3DSA:3.90.1150.10 26 350 1.5E-110 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_06495 c7d65dd88cbd17aea2e1cb17c39b2c73 362 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 361 57.57 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 C3Y93_06495 c7d65dd88cbd17aea2e1cb17c39b2c73 362 Gene3D G3DSA:3.40.640.10 44 268 1.5E-110 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_06495 c7d65dd88cbd17aea2e1cb17c39b2c73 362 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 13 357 5.4E-95 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 C3Y93_00380 3c086aa5e47fb0577342d23bfeb9d5ed 308 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 61 308 3.4E-122 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 C3Y93_00380 3c086aa5e47fb0577342d23bfeb9d5ed 308 Gene3D G3DSA:3.40.50.300 58 306 6.0E-62 T 14-10-2018 C3Y93_00380 3c086aa5e47fb0577342d23bfeb9d5ed 308 SUPERFAMILY SSF52540 60 296 2.07E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00380 3c086aa5e47fb0577342d23bfeb9d5ed 308 SMART SM00382 85 280 1.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_00380 3c086aa5e47fb0577342d23bfeb9d5ed 308 Pfam PF00005 ABC transporter 77 232 9.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_00380 3c086aa5e47fb0577342d23bfeb9d5ed 308 ProSitePatterns PS00211 ABC transporters family signature. 205 219 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_13770 891bd022bc051ee269008eff8ed3b860 356 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C3Y93_13770 891bd022bc051ee269008eff8ed3b860 356 Gene3D G3DSA:3.20.20.210 1 356 9.3E-162 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 C3Y93_13770 891bd022bc051ee269008eff8ed3b860 356 SUPERFAMILY SSF51726 1 354 3.14E-117 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 C3Y93_13770 891bd022bc051ee269008eff8ed3b860 356 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 351 1.4E-136 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C3Y93_13770 891bd022bc051ee269008eff8ed3b860 356 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 352 48.692 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C3Y93_13770 891bd022bc051ee269008eff8ed3b860 356 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C3Y93_13770 891bd022bc051ee269008eff8ed3b860 356 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 350 3.2E-133 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C3Y93_09740 1121eba47e928986aed8b0ea5c366fdc 646 Pfam PF00005 ABC transporter 18 177 8.4E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_09740 1121eba47e928986aed8b0ea5c366fdc 646 SMART SM00382 26 222 1.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_09740 1121eba47e928986aed8b0ea5c366fdc 646 SMART SM00382 336 503 3.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_09740 1121eba47e928986aed8b0ea5c366fdc 646 Pfam PF12848 ABC transporter 216 294 8.6E-28 T 14-10-2018 IPR032781 ABC-transporter extension domain C3Y93_09740 1121eba47e928986aed8b0ea5c366fdc 646 Pfam PF00005 ABC transporter 329 459 2.4E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_09740 1121eba47e928986aed8b0ea5c366fdc 646 SUPERFAMILY SSF52540 294 513 1.37E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_09740 1121eba47e928986aed8b0ea5c366fdc 646 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_09740 1121eba47e928986aed8b0ea5c366fdc 646 SUPERFAMILY SSF52540 2 254 2.12E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_09740 1121eba47e928986aed8b0ea5c366fdc 646 Gene3D G3DSA:3.40.50.300 1 258 5.8E-55 T 14-10-2018 C3Y93_09740 1121eba47e928986aed8b0ea5c366fdc 646 Gene3D G3DSA:3.40.50.300 274 535 1.5E-52 T 14-10-2018 C3Y93_09740 1121eba47e928986aed8b0ea5c366fdc 646 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_02465 c3bc5700d79463373925dcb2ad7cfed6 261 Pfam PF00106 short chain dehydrogenase 8 199 1.5E-55 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02465 c3bc5700d79463373925dcb2ad7cfed6 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02465 c3bc5700d79463373925dcb2ad7cfed6 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 5.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02465 c3bc5700d79463373925dcb2ad7cfed6 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02465 c3bc5700d79463373925dcb2ad7cfed6 261 SUPERFAMILY SSF51735 6 259 4.5E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_02465 c3bc5700d79463373925dcb2ad7cfed6 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3Y93_02465 c3bc5700d79463373925dcb2ad7cfed6 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.0E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02465 c3bc5700d79463373925dcb2ad7cfed6 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.0E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02465 c3bc5700d79463373925dcb2ad7cfed6 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 3.0E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02465 c3bc5700d79463373925dcb2ad7cfed6 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.0E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02465 c3bc5700d79463373925dcb2ad7cfed6 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.0E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02465 c3bc5700d79463373925dcb2ad7cfed6 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.0E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02465 c3bc5700d79463373925dcb2ad7cfed6 261 Gene3D G3DSA:3.40.50.720 7 261 2.5E-85 T 14-10-2018 C3Y93_02465 c3bc5700d79463373925dcb2ad7cfed6 261 TIGRFAM TIGR02415 23BDH: acetoin reductases 8 261 3.7E-105 T 14-10-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00650+1.1.1.304|MetaCyc: PWY-6389 C3Y93_04905 766a34f61a9d7336e86e6fc5d6fd1a8a 426 Pfam PF13356 Arm DNA-binding domain 8 102 1.3E-14 T 14-10-2018 IPR025166 Integrase, DNA-binding domain C3Y93_04905 766a34f61a9d7336e86e6fc5d6fd1a8a 426 SUPERFAMILY SSF56349 114 399 2.24E-54 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3Y93_04905 766a34f61a9d7336e86e6fc5d6fd1a8a 426 Gene3D G3DSA:1.10.150.130 105 218 2.2E-21 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C3Y93_04905 766a34f61a9d7336e86e6fc5d6fd1a8a 426 Gene3D G3DSA:1.10.443.10 232 400 8.3E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3Y93_04905 766a34f61a9d7336e86e6fc5d6fd1a8a 426 Gene3D G3DSA:3.30.160.390 6 103 4.3E-21 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily C3Y93_04905 766a34f61a9d7336e86e6fc5d6fd1a8a 426 Pfam PF00589 Phage integrase family 231 387 5.2E-15 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 SUPERFAMILY SSF52540 6 221 2.21E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 2.1E-225 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 Gene3D G3DSA:2.40.30.10 208 336 2.7E-53 T 14-10-2018 C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 Gene3D G3DSA:3.40.50.300 1 205 1.1E-68 T 14-10-2018 C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 5.0E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.328 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 Gene3D G3DSA:2.40.30.10 340 394 2.6E-28 T 14-10-2018 C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 SUPERFAMILY SSF50447 207 303 4.32E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.4E-18 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 8.7E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 3.5E-34 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal C3Y93_11095 f84b00ed99a212b2e72cd8bba632e79c 396 SUPERFAMILY SSF50465 300 394 1.24E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 SUPERFAMILY SSF52540 6 221 2.21E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 2.1E-225 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 Gene3D G3DSA:2.40.30.10 208 336 2.7E-53 T 14-10-2018 C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 Gene3D G3DSA:3.40.50.300 1 205 1.1E-68 T 14-10-2018 C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 5.0E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.328 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 Gene3D G3DSA:2.40.30.10 340 394 2.6E-28 T 14-10-2018 C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 SUPERFAMILY SSF50447 207 303 4.32E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.4E-18 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 8.7E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 3.5E-34 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal C3Y93_06315 f84b00ed99a212b2e72cd8bba632e79c 396 SUPERFAMILY SSF50465 300 394 1.24E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal C3Y93_08810 d03f2b83b7be7acf19c3f44893b4ccb4 306 SUPERFAMILY SSF49482 15 291 1.96E-83 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 C3Y93_08810 d03f2b83b7be7acf19c3f44893b4ccb4 306 Gene3D G3DSA:2.60.130.10 1 306 1.1E-119 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 C3Y93_08810 d03f2b83b7be7acf19c3f44893b4ccb4 306 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 2 287 2.8E-145 T 14-10-2018 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1 C3Y93_08810 d03f2b83b7be7acf19c3f44893b4ccb4 306 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 133 161 - T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 C3Y93_08810 d03f2b83b7be7acf19c3f44893b4ccb4 306 Pfam PF04444 Catechol dioxygenase N terminus 23 91 2.1E-22 T 14-10-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 C3Y93_08810 d03f2b83b7be7acf19c3f44893b4ccb4 306 Pfam PF00775 Dioxygenase 101 287 4.3E-59 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 C3Y93_04255 c4ce9261fdb7c6cd668e928bae7aa343 269 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 97 103 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3Y93_04255 c4ce9261fdb7c6cd668e928bae7aa343 269 SUPERFAMILY SSF53474 6 265 1.51E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_04255 c4ce9261fdb7c6cd668e928bae7aa343 269 Gene3D G3DSA:3.40.50.1820 2 268 7.1E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_04255 c4ce9261fdb7c6cd668e928bae7aa343 269 Pfam PF12697 Alpha/beta hydrolase family 55 257 6.7E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_04400 5609b5625ec4b39367cf5c9df558d7d7 797 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 157 694 3.4E-154 T 14-10-2018 C3Y93_04400 5609b5625ec4b39367cf5c9df558d7d7 797 Gene3D G3DSA:3.40.710.10 48 705 3.9E-243 T 14-10-2018 C3Y93_04400 5609b5625ec4b39367cf5c9df558d7d7 797 PIRSF PIRSF002799 1 775 6.7E-302 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_04400 5609b5625ec4b39367cf5c9df558d7d7 797 Pfam PF00912 Transglycosylase 153 323 2.1E-60 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_04400 5609b5625ec4b39367cf5c9df558d7d7 797 Gene3D G3DSA:1.10.3810.10 145 347 3.9E-243 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_04400 5609b5625ec4b39367cf5c9df558d7d7 797 SUPERFAMILY SSF53955 145 346 9.28E-69 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3Y93_04400 5609b5625ec4b39367cf5c9df558d7d7 797 SUPERFAMILY SSF56601 305 745 1.42E-110 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3Y93_04400 5609b5625ec4b39367cf5c9df558d7d7 797 Pfam PF14814 Bifunctional transglycosylase second domain 59 141 7.7E-22 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_04400 5609b5625ec4b39367cf5c9df558d7d7 797 Gene3D G3DSA:3.30.2060.10 56 144 3.9E-243 T 14-10-2018 C3Y93_04400 5609b5625ec4b39367cf5c9df558d7d7 797 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 14 737 5.1E-241 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_04400 5609b5625ec4b39367cf5c9df558d7d7 797 Pfam PF00905 Penicillin binding protein transpeptidase domain 418 684 7.1E-23 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 3.3E-28 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 3.3E-28 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 3.3E-28 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 3.3E-28 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 SUPERFAMILY SSF55957 370 455 2.79E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 Gene3D G3DSA:3.40.120.10 170 252 1.3E-27 T 14-10-2018 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 Gene3D G3DSA:3.40.120.10 2 148 1.4E-50 T 14-10-2018 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 135 1.8E-32 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 SUPERFAMILY SSF53738 261 367 2.51E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 SUPERFAMILY SSF53738 3 174 5.49E-37 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 SUPERFAMILY SSF53738 151 259 8.63E-25 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 Gene3D G3DSA:3.30.310.50 372 456 5.1E-27 T 14-10-2018 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 Gene3D G3DSA:3.40.120.10 253 371 5.3E-32 T 14-10-2018 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 371 1.4E-23 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 438 3.5E-10 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_10285 3da95f04288ae7d511f6e181051eeb5b 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 256 3.2E-20 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 Pfam PF03129 Anticodon binding domain 479 569 6.2E-18 T 14-10-2018 IPR004154 Anticodon-binding C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 SUPERFAMILY SSF55681 10 481 2.03E-104 T 14-10-2018 C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.2E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.2E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.2E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.2E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 Gene3D G3DSA:3.30.930.10 11 468 1.8E-234 T 14-10-2018 C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 Pfam PF04073 Aminoacyl-tRNA editing domain 256 379 1.8E-20 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 1.3E-248 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 SUPERFAMILY SSF55826 218 393 8.76E-24 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 462 4.1E-47 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 SUPERFAMILY SSF52954 466 570 1.11E-28 T 14-10-2018 C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 Gene3D G3DSA:3.40.50.800 4 557 1.8E-234 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 40.981 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 PIRSF PIRSF001535 1 571 3.8E-262 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 C3Y93_05735 d517a6282395adf5fc11eb9d6799fe9b 571 Gene3D G3DSA:3.90.960.10 240 392 1.8E-234 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 C3Y93_10485 01b5e340a61ad236f3575ccd89cc78e0 276 Pfam PF13649 Methyltransferase domain 68 160 7.5E-12 T 14-10-2018 C3Y93_10485 01b5e340a61ad236f3575ccd89cc78e0 276 Gene3D G3DSA:3.40.50.150 2 275 4.5E-29 T 14-10-2018 C3Y93_10485 01b5e340a61ad236f3575ccd89cc78e0 276 SUPERFAMILY SSF53335 33 275 1.18E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_13440 9150434ab6baa5a779d34fb125ce9500 222 Gene3D G3DSA:3.40.50.150 50 202 3.3E-21 T 14-10-2018 C3Y93_13440 9150434ab6baa5a779d34fb125ce9500 222 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 86 155 1.1E-14 T 14-10-2018 C3Y93_13440 9150434ab6baa5a779d34fb125ce9500 222 SUPERFAMILY SSF53335 62 184 1.47E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_13015 b8ca8178c73850160f5273c5a26468cd 325 SUPERFAMILY SSF48576 5 323 9.36E-95 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C3Y93_13015 b8ca8178c73850160f5273c5a26468cd 325 Pfam PF00348 Polyprenyl synthetase 35 269 3.8E-72 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 C3Y93_13015 b8ca8178c73850160f5273c5a26468cd 325 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 206 218 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site C3Y93_13015 b8ca8178c73850160f5273c5a26468cd 325 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 99 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site C3Y93_13015 b8ca8178c73850160f5273c5a26468cd 325 Gene3D G3DSA:1.10.600.10 1 325 2.9E-106 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C3Y93_11440 6054da19ecd2d7393896e35b4320a5b5 260 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 150 243 19.599 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 C3Y93_11440 6054da19ecd2d7393896e35b4320a5b5 260 SUPERFAMILY SSF141734 4 122 1.19E-48 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 C3Y93_11440 6054da19ecd2d7393896e35b4320a5b5 260 Gene3D G3DSA:1.10.287.1080 149 249 8.9E-27 T 14-10-2018 C3Y93_11440 6054da19ecd2d7393896e35b4320a5b5 260 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 55 109 4.0E-26 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 C3Y93_11440 6054da19ecd2d7393896e35b4320a5b5 260 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 154 243 7.7E-25 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 C3Y93_11440 6054da19ecd2d7393896e35b4320a5b5 260 SUPERFAMILY SSF101386 152 247 1.48E-21 T 14-10-2018 C3Y93_11440 6054da19ecd2d7393896e35b4320a5b5 260 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 32 106 7.9E-34 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 C3Y93_11440 6054da19ecd2d7393896e35b4320a5b5 260 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 157 246 4.6E-13 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 C3Y93_11440 6054da19ecd2d7393896e35b4320a5b5 260 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 248 33.779 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 C3Y93_11440 6054da19ecd2d7393896e35b4320a5b5 260 Gene3D G3DSA:3.10.20.400 2 97 2.4E-38 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 C3Y93_11440 6054da19ecd2d7393896e35b4320a5b5 260 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 6 110 32.057 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 C3Y93_07370 b43a524b5dcdd079e0915ccf175fab30 421 Pfam PF00171 Aldehyde dehydrogenase family 11 289 2.7E-17 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3Y93_07370 b43a524b5dcdd079e0915ccf175fab30 421 Pfam PF00171 Aldehyde dehydrogenase family 313 377 1.1E-6 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3Y93_07370 b43a524b5dcdd079e0915ccf175fab30 421 Gene3D G3DSA:3.40.605.10 15 417 1.1E-164 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C3Y93_07370 b43a524b5dcdd079e0915ccf175fab30 421 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 327 349 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C3Y93_07370 b43a524b5dcdd079e0915ccf175fab30 421 SUPERFAMILY SSF53720 8 420 3.14E-120 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3Y93_07370 b43a524b5dcdd079e0915ccf175fab30 421 PIRSF PIRSF000151 1 421 1.4E-180 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 C3Y93_07370 b43a524b5dcdd079e0915ccf175fab30 421 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 410 6.1E-154 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C3Y93_07370 b43a524b5dcdd079e0915ccf175fab30 421 Gene3D G3DSA:3.40.309.10 229 378 1.1E-164 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C3Y93_07370 b43a524b5dcdd079e0915ccf175fab30 421 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 420 41.476 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C3Y93_07320 e5ad6dcc2349aa2f7537b229938b69b0 274 PIRSF PIRSF005902 1 274 1.1E-59 T 14-10-2018 IPR001130 TatD family GO:0016788 C3Y93_07320 e5ad6dcc2349aa2f7537b229938b69b0 274 SUPERFAMILY SSF51556 5 271 2.23E-69 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3Y93_07320 e5ad6dcc2349aa2f7537b229938b69b0 274 Gene3D G3DSA:3.20.20.140 1 270 1.2E-70 T 14-10-2018 C3Y93_07320 e5ad6dcc2349aa2f7537b229938b69b0 274 Pfam PF01026 TatD related DNase 6 268 8.3E-59 T 14-10-2018 IPR001130 TatD family GO:0016788 C3Y93_07320 e5ad6dcc2349aa2f7537b229938b69b0 274 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 C3Y93_09285 aac0932d19300f22ddc5dfae0abadb0d 303 Pfam PF07859 alpha/beta hydrolase fold 75 277 1.5E-60 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 C3Y93_09285 aac0932d19300f22ddc5dfae0abadb0d 303 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 75 91 - T 14-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 C3Y93_09285 aac0932d19300f22ddc5dfae0abadb0d 303 SUPERFAMILY SSF53474 23 298 3.67E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_09285 aac0932d19300f22ddc5dfae0abadb0d 303 Gene3D G3DSA:3.40.50.1820 7 302 2.6E-81 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_09285 aac0932d19300f22ddc5dfae0abadb0d 303 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 143 155 - T 14-10-2018 IPR033140 Lipase, GDXG, putative serine active site C3Y93_12890 7ad377a560294630c0af8be3c50cab80 427 Gene3D G3DSA:1.10.620.20 86 421 1.2E-109 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 C3Y93_12890 7ad377a560294630c0af8be3c50cab80 427 Pfam PF00268 Ribonucleotide reductase, small chain 108 394 6.2E-85 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3Y93_12890 7ad377a560294630c0af8be3c50cab80 427 SUPERFAMILY SSF47240 72 401 1.58E-96 T 14-10-2018 IPR009078 Ferritin-like superfamily C3Y93_12890 7ad377a560294630c0af8be3c50cab80 427 PIRSF PIRSF000355 78 427 1.8E-138 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3Y93_05125 8a9a7ffc8dae1625001b2618c01a57e7 447 Gene3D G3DSA:3.40.50.620 17 194 7.6E-118 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_05125 8a9a7ffc8dae1625001b2618c01a57e7 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 132 143 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3Y93_05125 8a9a7ffc8dae1625001b2618c01a57e7 447 Hamap MF_00581 Argininosuccinate synthase [argG]. 4 446 68.313 T 14-10-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3Y93_05125 8a9a7ffc8dae1625001b2618c01a57e7 447 SUPERFAMILY SSF69864 193 445 1.57E-80 T 14-10-2018 C3Y93_05125 8a9a7ffc8dae1625001b2618c01a57e7 447 Gene3D G3DSA:3.90.1260.10 77 370 7.6E-118 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3Y93_05125 8a9a7ffc8dae1625001b2618c01a57e7 447 Gene3D G3DSA:1.10.287.400 380 443 4.5E-31 T 14-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3Y93_05125 8a9a7ffc8dae1625001b2618c01a57e7 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 20 28 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3Y93_05125 8a9a7ffc8dae1625001b2618c01a57e7 447 Pfam PF00764 Arginosuccinate synthase 19 412 2.1E-60 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3Y93_05125 8a9a7ffc8dae1625001b2618c01a57e7 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 16 422 1.1E-163 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3Y93_05125 8a9a7ffc8dae1625001b2618c01a57e7 447 SUPERFAMILY SSF52402 8 191 1.35E-34 T 14-10-2018 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 47.11 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 SUPERFAMILY SSF52021 4 143 1.83E-55 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 Pfam PF00117 Glutamine amidotransferase class-I 196 372 3.0E-46 T 14-10-2018 IPR017926 Glutamine amidotransferase C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 135 3.0E-51 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 SUPERFAMILY SSF52317 157 376 1.46E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 8.7E-143 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 SMART SM01097 3 136 2.7E-90 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 Gene3D G3DSA:3.40.50.880 155 378 4.3E-71 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 14-10-2018 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 14-10-2018 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 PRINTS PR00097 Anthranilate synthase component II signature 235 244 1.1E-5 T 14-10-2018 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 3.5E-11 T 14-10-2018 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.5E-11 T 14-10-2018 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.5E-11 T 14-10-2018 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 8.0E-39 T 14-10-2018 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 8.0E-39 T 14-10-2018 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 8.0E-39 T 14-10-2018 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 8.0E-39 T 14-10-2018 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 8.0E-39 T 14-10-2018 C3Y93_13360 077fc8d1862cc4037f198e018683202b 379 Gene3D G3DSA:3.50.30.20 3 154 3.7E-58 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_09780 833a98d5abb3671ff912d6c6ed2b4aac 106 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 6.0E-23 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C3Y93_09780 833a98d5abb3671ff912d6c6ed2b4aac 106 SMART SM01234 1 68 7.6E-44 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C3Y93_09780 833a98d5abb3671ff912d6c6ed2b4aac 106 Pfam PF01809 Haemolytic domain 5 68 1.1E-29 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C3Y93_09780 833a98d5abb3671ff912d6c6ed2b4aac 106 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 7 72 2.2E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C3Y93_09780 833a98d5abb3671ff912d6c6ed2b4aac 106 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 23.774 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 SUPERFAMILY SSF55681 2 253 4.72E-106 T 14-10-2018 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 SUPERFAMILY SSF55186 565 726 2.75E-46 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 SUPERFAMILY SSF101353 254 475 1.19E-59 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 665 714 1.2E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 Pfam PF01411 tRNA synthetases class II (A) 5 565 1.7E-219 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 Gene3D G3DSA:3.10.310.40 781 890 1.8E-25 T 14-10-2018 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 Gene3D G3DSA:2.40.30.130 479 564 2.5E-10 T 14-10-2018 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 Pfam PF02272 DHHA1 domain 752 889 6.8E-23 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 Gene3D G3DSA:3.30.54.20 636 695 1.8E-49 T 14-10-2018 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 Gene3D G3DSA:3.30.930.10 1 250 2.7E-120 T 14-10-2018 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 318 331 2.2E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 2.2E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 2.2E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 2.2E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 294 310 2.2E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 871 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 892 191.827 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 Gene3D G3DSA:3.30.980.10 574 715 1.8E-49 T 14-10-2018 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 SMART SM00863 665 714 1.0E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 C3Y93_00595 3c17c943f917d85880cc9519566b9931 892 SUPERFAMILY SSF50447 466 564 2.35E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3Y93_10255 d832983cc4f4636cc2bf930351b4f238 391 Gene3D G3DSA:3.40.640.10 5 256 3.8E-86 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_10255 d832983cc4f4636cc2bf930351b4f238 391 Gene3D G3DSA:3.90.1150.10 257 390 1.6E-17 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_10255 d832983cc4f4636cc2bf930351b4f238 391 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 382 3.3E-98 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase C3Y93_10255 d832983cc4f4636cc2bf930351b4f238 391 SUPERFAMILY SSF53383 9 386 1.05E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_10255 d832983cc4f4636cc2bf930351b4f238 391 PIRSF PIRSF000390 1 390 4.8E-118 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase C3Y93_01595 45f03b309766dc5f757c49fd817070cd 118 Pfam PF04221 RelB antitoxin 6 72 6.0E-13 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ C3Y93_01595 45f03b309766dc5f757c49fd817070cd 118 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 2 73 4.5E-17 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ C3Y93_01595 45f03b309766dc5f757c49fd817070cd 118 Gene3D G3DSA:1.10.1220.10 3 52 3.2E-14 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 C3Y93_02775 83f89bafc3f76f3b77dc373b65d5d778 393 SUPERFAMILY SSF103473 11 384 4.97E-46 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_02775 83f89bafc3f76f3b77dc373b65d5d778 393 Pfam PF12832 MFS_1 like family 9 363 7.0E-82 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain C3Y93_02775 83f89bafc3f76f3b77dc373b65d5d778 393 PIRSF PIRSF004925 1 390 4.3E-109 T 14-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter C3Y93_02775 83f89bafc3f76f3b77dc373b65d5d778 393 Gene3D G3DSA:1.20.1250.20 191 389 9.7E-36 T 14-10-2018 C3Y93_02775 83f89bafc3f76f3b77dc373b65d5d778 393 Gene3D G3DSA:1.20.1250.20 9 189 5.5E-21 T 14-10-2018 C3Y93_11065 0fe86aecd19991013e257eb8dd2d7ff3 223 Gene3D G3DSA:3.40.50.1000 12 216 5.4E-62 T 14-10-2018 IPR023214 HAD superfamily C3Y93_11065 0fe86aecd19991013e257eb8dd2d7ff3 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 195 2.8E-37 T 14-10-2018 C3Y93_11065 0fe86aecd19991013e257eb8dd2d7ff3 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 96 195 9.8E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3Y93_11065 0fe86aecd19991013e257eb8dd2d7ff3 223 Gene3D G3DSA:1.10.150.240 24 94 5.4E-62 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 C3Y93_11065 0fe86aecd19991013e257eb8dd2d7ff3 223 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 12 222 4.4E-59 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 C3Y93_11065 0fe86aecd19991013e257eb8dd2d7ff3 223 SUPERFAMILY SSF56784 9 223 1.33E-58 T 14-10-2018 IPR036412 HAD-like superfamily C3Y93_11065 0fe86aecd19991013e257eb8dd2d7ff3 223 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 189 1.8E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3Y93_07150 929c516fe964735d475c665bd89f5f6e 657 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_07150 929c516fe964735d475c665bd89f5f6e 657 Gene3D G3DSA:3.40.50.300 5 271 5.5E-66 T 14-10-2018 C3Y93_07150 929c516fe964735d475c665bd89f5f6e 657 SUPERFAMILY SSF52540 7 230 3.29E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_07150 929c516fe964735d475c665bd89f5f6e 657 Pfam PF12704 MacB-like periplasmic core domain 279 497 1.0E-39 T 14-10-2018 IPR025857 MacB-like periplasmic core domain C3Y93_07150 929c516fe964735d475c665bd89f5f6e 657 SMART SM00382 36 230 1.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_07150 929c516fe964735d475c665bd89f5f6e 657 Pfam PF00005 ABC transporter 27 175 2.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_07150 929c516fe964735d475c665bd89f5f6e 657 Pfam PF02687 FtsX-like permease family 561 650 5.1E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 C3Y93_02740 fca46a3834f8b9a3c28783bdf7a3f9bd 398 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 1 398 33.075 T 14-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 C3Y93_02740 fca46a3834f8b9a3c28783bdf7a3f9bd 398 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 1.6E-10 T 14-10-2018 C3Y93_02740 fca46a3834f8b9a3c28783bdf7a3f9bd 398 PRINTS PR00173 Glutamate-aspartate symporter signature 284 310 1.6E-10 T 14-10-2018 C3Y93_02740 fca46a3834f8b9a3c28783bdf7a3f9bd 398 PRINTS PR00173 Glutamate-aspartate symporter signature 182 201 1.6E-10 T 14-10-2018 C3Y93_02740 fca46a3834f8b9a3c28783bdf7a3f9bd 398 PRINTS PR00173 Glutamate-aspartate symporter signature 319 338 1.6E-10 T 14-10-2018 C3Y93_02740 fca46a3834f8b9a3c28783bdf7a3f9bd 398 SUPERFAMILY SSF118215 10 395 4.18E-89 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 C3Y93_02740 fca46a3834f8b9a3c28783bdf7a3f9bd 398 Gene3D G3DSA:1.10.3860.10 1 397 3.3E-70 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 C3Y93_02740 fca46a3834f8b9a3c28783bdf7a3f9bd 398 Pfam PF00375 Sodium:dicarboxylate symporter family 10 395 4.2E-64 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 C3Y93_12885 67e23aecbf4dbd42ae8a0e8d2185a33f 163 Gene3D G3DSA:2.30.110.10 11 142 1.1E-11 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 C3Y93_12885 67e23aecbf4dbd42ae8a0e8d2185a33f 163 SUPERFAMILY SSF50475 20 153 1.64E-10 T 14-10-2018 C3Y93_12885 67e23aecbf4dbd42ae8a0e8d2185a33f 163 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 25 81 2.2E-5 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 C3Y93_11770 5d47f5da9f768be02ac0fb0bb6204b36 339 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 271 333 1.0E-24 T 14-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 C3Y93_11770 5d47f5da9f768be02ac0fb0bb6204b36 339 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 339 196.139 T 14-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 C3Y93_11770 5d47f5da9f768be02ac0fb0bb6204b36 339 Pfam PF07836 DmpG-like communication domain 272 333 3.2E-28 T 14-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 C3Y93_11770 5d47f5da9f768be02ac0fb0bb6204b36 339 Gene3D G3DSA:1.10.8.60 273 339 1.5E-28 T 14-10-2018 C3Y93_11770 5d47f5da9f768be02ac0fb0bb6204b36 339 SUPERFAMILY SSF51569 1 263 5.13E-67 T 14-10-2018 C3Y93_11770 5d47f5da9f768be02ac0fb0bb6204b36 339 Pfam PF00682 HMGL-like 3 260 3.4E-58 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 C3Y93_11770 5d47f5da9f768be02ac0fb0bb6204b36 339 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 3 334 1.3E-159 T 14-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 C3Y93_11770 5d47f5da9f768be02ac0fb0bb6204b36 339 SUPERFAMILY SSF89000 286 335 8.63E-16 T 14-10-2018 C3Y93_11770 5d47f5da9f768be02ac0fb0bb6204b36 339 Gene3D G3DSA:3.20.20.70 1 266 7.3E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_07865 d7c1b54957b21a6c9fdfe67bcc6f228c 136 Gene3D G3DSA:3.90.79.10 2 136 1.7E-23 T 14-10-2018 C3Y93_07865 d7c1b54957b21a6c9fdfe67bcc6f228c 136 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C3Y93_07865 d7c1b54957b21a6c9fdfe67bcc6f228c 136 Pfam PF00293 NUDIX domain 11 126 2.2E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3Y93_07865 d7c1b54957b21a6c9fdfe67bcc6f228c 136 SUPERFAMILY SSF55811 4 133 7.31E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3Y93_02755 4618074fff448c3787511d90a6b4fe9e 428 SUPERFAMILY SSF50182 186 252 4.25E-12 T 14-10-2018 IPR010920 LSM domain superfamily C3Y93_02755 4618074fff448c3787511d90a6b4fe9e 428 Pfam PF00924 Mechanosensitive ion channel 142 395 1.2E-50 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 C3Y93_06810 e23dad16874b4ad62b55e1bbb7ccba40 373 Gene3D G3DSA:3.30.413.10 261 360 3.0E-27 T 14-10-2018 C3Y93_06810 e23dad16874b4ad62b55e1bbb7ccba40 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 6 362 33.983 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 C3Y93_06810 e23dad16874b4ad62b55e1bbb7ccba40 373 Gene3D G3DSA:3.20.20.20 1 260 3.8E-103 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_06810 e23dad16874b4ad62b55e1bbb7ccba40 373 PIRSF PIRSF004640 1 362 5.1E-145 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 C3Y93_06810 e23dad16874b4ad62b55e1bbb7ccba40 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 8 351 1.0E-126 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 C3Y93_06810 e23dad16874b4ad62b55e1bbb7ccba40 373 SUPERFAMILY SSF56014 264 352 1.96E-13 T 14-10-2018 C3Y93_06810 e23dad16874b4ad62b55e1bbb7ccba40 373 SUPERFAMILY SSF51604 21 137 9.18E-8 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily C3Y93_06810 e23dad16874b4ad62b55e1bbb7ccba40 373 Pfam PF04551 GcpE protein 11 352 2.0E-132 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 C3Y93_01890 9856db164e456c72c0ae9a49125c4e7e 447 Pfam PF00919 Uncharacterized protein family UPF0004 5 95 5.9E-21 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 C3Y93_01890 9856db164e456c72c0ae9a49125c4e7e 447 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 438 5.1E-183 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 C3Y93_01890 9856db164e456c72c0ae9a49125c4e7e 447 Gene3D G3DSA:3.40.50.12160 5 125 1.6E-28 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily C3Y93_01890 9856db164e456c72c0ae9a49125c4e7e 447 Gene3D G3DSA:2.40.50.140 377 446 2.2E-19 T 14-10-2018 C3Y93_01890 9856db164e456c72c0ae9a49125c4e7e 447 Gene3D G3DSA:3.80.30.20 135 376 4.6E-72 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C3Y93_01890 9856db164e456c72c0ae9a49125c4e7e 447 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 4 441 61.058 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 C3Y93_01890 9856db164e456c72c0ae9a49125c4e7e 447 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 438 2.0E-104 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 C3Y93_01890 9856db164e456c72c0ae9a49125c4e7e 447 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 C3Y93_01890 9856db164e456c72c0ae9a49125c4e7e 447 Pfam PF04055 Radical SAM superfamily 143 320 2.3E-28 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3Y93_01890 9856db164e456c72c0ae9a49125c4e7e 447 SUPERFAMILY SSF102114 121 367 8.11E-53 T 14-10-2018 C3Y93_01890 9856db164e456c72c0ae9a49125c4e7e 447 SMART SM00729 137 359 2.3E-54 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3Y93_10835 acd6a89fa677b4d4939bcde980601eb3 219 Pfam PF00677 Lumazine binding domain 99 183 1.1E-23 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3Y93_10835 acd6a89fa677b4d4939bcde980601eb3 219 Pfam PF00677 Lumazine binding domain 3 86 1.4E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3Y93_10835 acd6a89fa677b4d4939bcde980601eb3 219 PIRSF PIRSF000498 1 212 1.9E-77 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3Y93_10835 acd6a89fa677b4d4939bcde980601eb3 219 Gene3D G3DSA:2.40.30.20 101 205 3.3E-34 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3Y93_10835 acd6a89fa677b4d4939bcde980601eb3 219 SUPERFAMILY SSF63380 92 193 1.79E-31 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3Y93_10835 acd6a89fa677b4d4939bcde980601eb3 219 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 2.1E-64 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3Y93_10835 acd6a89fa677b4d4939bcde980601eb3 219 Gene3D G3DSA:2.40.30.20 1 88 2.6E-27 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3Y93_10835 acd6a89fa677b4d4939bcde980601eb3 219 SUPERFAMILY SSF63380 1 88 9.35E-27 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3Y93_10355 027e0d31d56b37fa70240cffac8b6a26 211 Pfam PF09335 SNARE associated Golgi protein 45 171 2.7E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein C3Y93_09405 81b52372258f1feb47ec9c6fa61d560e 384 SUPERFAMILY SSF53383 4 382 3.13E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_09405 81b52372258f1feb47ec9c6fa61d560e 384 Gene3D G3DSA:3.90.1150.10 17 380 4.0E-127 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_09405 81b52372258f1feb47ec9c6fa61d560e 384 Gene3D G3DSA:3.40.640.10 41 280 4.0E-127 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_09405 81b52372258f1feb47ec9c6fa61d560e 384 Pfam PF00155 Aminotransferase class I and II 29 375 8.6E-60 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3Y93_10175 ea01059cdf1577930bc1fffa64caf3d7 599 SUPERFAMILY SSF90123 6 322 1.44E-24 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3Y93_10175 ea01059cdf1577930bc1fffa64caf3d7 599 Gene3D G3DSA:3.40.50.300 354 599 4.7E-83 T 14-10-2018 C3Y93_10175 ea01059cdf1577930bc1fffa64caf3d7 599 Pfam PF00664 ABC transporter transmembrane region 41 246 1.4E-12 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 C3Y93_10175 ea01059cdf1577930bc1fffa64caf3d7 599 SMART SM00382 387 566 6.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_10175 ea01059cdf1577930bc1fffa64caf3d7 599 Gene3D G3DSA:1.20.1560.10 4 337 1.9E-16 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3Y93_10175 ea01059cdf1577930bc1fffa64caf3d7 599 SUPERFAMILY SSF52540 354 597 2.27E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_10175 ea01059cdf1577930bc1fffa64caf3d7 599 Pfam PF00005 ABC transporter 379 529 1.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_10175 ea01059cdf1577930bc1fffa64caf3d7 599 ProSitePatterns PS00211 ABC transporters family signature. 501 515 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_00475 2311d4482f6fd5a3bcb31e6ab1f29e11 897 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 689 795 2.3E-10 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 C3Y93_00475 2311d4482f6fd5a3bcb31e6ab1f29e11 897 Gene3D G3DSA:1.10.8.60 489 577 5.8E-13 T 14-10-2018 C3Y93_00475 2311d4482f6fd5a3bcb31e6ab1f29e11 897 Pfam PF13654 AAA domain 64 579 2.7E-171 T 14-10-2018 C3Y93_00475 2311d4482f6fd5a3bcb31e6ab1f29e11 897 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 716 735 7.4E-11 T 14-10-2018 C3Y93_00475 2311d4482f6fd5a3bcb31e6ab1f29e11 897 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 686 705 7.4E-11 T 14-10-2018 C3Y93_00475 2311d4482f6fd5a3bcb31e6ab1f29e11 897 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 746 764 7.4E-11 T 14-10-2018 C3Y93_00475 2311d4482f6fd5a3bcb31e6ab1f29e11 897 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 100 119 7.4E-11 T 14-10-2018 C3Y93_00475 2311d4482f6fd5a3bcb31e6ab1f29e11 897 Gene3D G3DSA:3.30.230.10 582 816 3.0E-90 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3Y93_00475 2311d4482f6fd5a3bcb31e6ab1f29e11 897 SUPERFAMILY SSF54211 603 795 4.55E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_00475 2311d4482f6fd5a3bcb31e6ab1f29e11 897 SUPERFAMILY SSF52540 66 591 2.2E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00475 2311d4482f6fd5a3bcb31e6ab1f29e11 897 Gene3D G3DSA:3.40.50.300 45 226 1.3E-28 T 14-10-2018 C3Y93_00475 2311d4482f6fd5a3bcb31e6ab1f29e11 897 Gene3D G3DSA:3.40.50.300 291 488 4.0E-54 T 14-10-2018 C3Y93_13120 5db3fe5a345f195717a216754ef9aef1 310 Hamap MF_00469 UPF0176 protein YceA [yceA]. 17 267 42.971 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 C3Y93_13120 5db3fe5a345f195717a216754ef9aef1 310 Pfam PF00581 Rhodanese-like domain 128 223 1.2E-11 T 14-10-2018 IPR001763 Rhodanese-like domain C3Y93_13120 5db3fe5a345f195717a216754ef9aef1 310 SUPERFAMILY SSF52821 122 250 7.41E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3Y93_13120 5db3fe5a345f195717a216754ef9aef1 310 SMART SM00450 126 227 1.5E-21 T 14-10-2018 IPR001763 Rhodanese-like domain C3Y93_13120 5db3fe5a345f195717a216754ef9aef1 310 Gene3D G3DSA:3.40.250.10 114 261 2.0E-50 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3Y93_13120 5db3fe5a345f195717a216754ef9aef1 310 Gene3D G3DSA:3.30.70.100 10 110 1.7E-28 T 14-10-2018 C3Y93_00095 a1919becd09830d58be7563866516012 200 SUPERFAMILY SSF46929 153 198 6.54E-9 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily C3Y93_00095 a1919becd09830d58be7563866516012 200 Pfam PF14520 Helix-hairpin-helix domain 71 129 1.9E-18 T 14-10-2018 C3Y93_00095 a1919becd09830d58be7563866516012 200 SMART SM00278 72 91 0.52 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3Y93_00095 a1919becd09830d58be7563866516012 200 SMART SM00278 107 126 0.087 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3Y93_00095 a1919becd09830d58be7563866516012 200 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 199 29.745 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 C3Y93_00095 a1919becd09830d58be7563866516012 200 SUPERFAMILY SSF47781 65 135 6.39E-22 T 14-10-2018 IPR010994 RuvA domain 2-like C3Y93_00095 a1919becd09830d58be7563866516012 200 Gene3D G3DSA:2.40.50.140 1 65 3.1E-22 T 14-10-2018 C3Y93_00095 a1919becd09830d58be7563866516012 200 Gene3D G3DSA:1.10.8.10 152 198 2.2E-13 T 14-10-2018 C3Y93_00095 a1919becd09830d58be7563866516012 200 Pfam PF01330 RuvA N terminal domain 1 61 1.1E-18 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 C3Y93_00095 a1919becd09830d58be7563866516012 200 Gene3D G3DSA:1.10.150.20 66 141 4.3E-26 T 14-10-2018 C3Y93_00095 a1919becd09830d58be7563866516012 200 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 197 7.5E-56 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 C3Y93_00095 a1919becd09830d58be7563866516012 200 Pfam PF07499 RuvA, C-terminal domain 155 198 1.2E-12 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 C3Y93_00095 a1919becd09830d58be7563866516012 200 SUPERFAMILY SSF50249 1 62 8.0E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_10470 be5463b3b8dd6197f7e531e7686fe28d 187 Pfam PF00578 AhpC/TSA family 4 132 1.2E-34 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3Y93_10470 be5463b3b8dd6197f7e531e7686fe28d 187 PIRSF PIRSF000239 1 187 1.3E-55 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3Y93_10470 be5463b3b8dd6197f7e531e7686fe28d 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 1.4E-5 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3Y93_10470 be5463b3b8dd6197f7e531e7686fe28d 187 SUPERFAMILY SSF52833 2 186 2.07E-58 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_10470 be5463b3b8dd6197f7e531e7686fe28d 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.3E-103 T 14-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 C3Y93_10470 be5463b3b8dd6197f7e531e7686fe28d 187 Gene3D G3DSA:3.40.30.10 1 186 1.0E-64 T 14-10-2018 C3Y93_08565 f02ab6bc1273b1346de8865efb89f43a 454 SUPERFAMILY SSF51161 252 436 2.11E-49 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3Y93_08565 f02ab6bc1273b1346de8865efb89f43a 454 Gene3D G3DSA:2.160.10.10 225 453 1.3E-68 T 14-10-2018 C3Y93_08565 f02ab6bc1273b1346de8865efb89f43a 454 Gene3D G3DSA:3.90.550.10 1 224 2.2E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_08565 f02ab6bc1273b1346de8865efb89f43a 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 41.974 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 C3Y93_08565 f02ab6bc1273b1346de8865efb89f43a 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 296 4.6E-6 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_08565 f02ab6bc1273b1346de8865efb89f43a 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.3E-7 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_08565 f02ab6bc1273b1346de8865efb89f43a 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 315 348 3.3E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_08565 f02ab6bc1273b1346de8865efb89f43a 454 Pfam PF12804 MobA-like NTP transferase domain 5 131 6.7E-21 T 14-10-2018 IPR025877 MobA-like NTP transferase C3Y93_08565 f02ab6bc1273b1346de8865efb89f43a 454 SUPERFAMILY SSF53448 1 249 5.83E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_08565 f02ab6bc1273b1346de8865efb89f43a 454 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 C3Y93_08565 f02ab6bc1273b1346de8865efb89f43a 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 6.9E-193 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 C3Y93_02045 15aa55ec2a4cc0693655f38fd0d76689 170 Pfam PF03737 Aldolase/RraA 8 162 9.2E-46 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein C3Y93_02045 15aa55ec2a4cc0693655f38fd0d76689 170 SUPERFAMILY SSF89562 26 168 4.32E-45 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily C3Y93_02045 15aa55ec2a4cc0693655f38fd0d76689 170 Gene3D G3DSA:3.50.30.40 4 169 5.6E-62 T 14-10-2018 C3Y93_02045 15aa55ec2a4cc0693655f38fd0d76689 170 TIGRFAM TIGR01935 NOT-MenG: RraA family 9 163 1.7E-60 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 C3Y93_00405 1e7399afc7adec263dfd3d2a35d88621 462 Gene3D G3DSA:1.10.40.30 379 445 4.3E-147 T 14-10-2018 C3Y93_00405 1e7399afc7adec263dfd3d2a35d88621 462 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 10 454 3.3E-132 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3Y93_00405 1e7399afc7adec263dfd3d2a35d88621 462 SUPERFAMILY SSF48557 8 455 9.11E-107 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 C3Y93_00405 1e7399afc7adec263dfd3d2a35d88621 462 Pfam PF00206 Lyase 12 309 4.9E-68 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal C3Y93_00405 1e7399afc7adec263dfd3d2a35d88621 462 Gene3D G3DSA:1.20.200.10 116 446 4.3E-147 T 14-10-2018 C3Y93_00405 1e7399afc7adec263dfd3d2a35d88621 462 Gene3D G3DSA:1.10.275.10 1 115 4.6E-48 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal C3Y93_00405 1e7399afc7adec263dfd3d2a35d88621 462 PRINTS PR00149 Fumarate lyase superfamily signature 160 178 1.1E-17 T 14-10-2018 IPR000362 Fumarate lyase family C3Y93_00405 1e7399afc7adec263dfd3d2a35d88621 462 PRINTS PR00149 Fumarate lyase superfamily signature 115 133 1.1E-17 T 14-10-2018 IPR000362 Fumarate lyase family C3Y93_00405 1e7399afc7adec263dfd3d2a35d88621 462 PRINTS PR00149 Fumarate lyase superfamily signature 248 275 1.1E-17 T 14-10-2018 IPR000362 Fumarate lyase family C3Y93_00405 1e7399afc7adec263dfd3d2a35d88621 462 PRINTS PR00149 Fumarate lyase superfamily signature 291 307 1.1E-17 T 14-10-2018 IPR000362 Fumarate lyase family C3Y93_00405 1e7399afc7adec263dfd3d2a35d88621 462 ProSitePatterns PS00163 Fumarate lyases signature. 291 300 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 C3Y93_00405 1e7399afc7adec263dfd3d2a35d88621 462 Pfam PF08328 Adenylosuccinate lyase C-terminal 328 445 4.6E-45 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 C3Y93_12010 13048628259e6bfd6316ccf2d0db3855 84 Gene3D G3DSA:3.30.70.330 1 84 1.1E-25 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily C3Y93_12010 13048628259e6bfd6316ccf2d0db3855 84 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 2.0E-20 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 C3Y93_12010 13048628259e6bfd6316ccf2d0db3855 84 SMART SM00360 2 75 3.6E-24 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 C3Y93_12010 13048628259e6bfd6316ccf2d0db3855 84 SUPERFAMILY SSF54928 2 81 2.01E-25 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 C3Y93_13265 2d0913a6e931cbac33cd7d59366b35a4 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 122 2.4E-24 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_13265 2d0913a6e931cbac33cd7d59366b35a4 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 126 8.1E-32 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_13265 2d0913a6e931cbac33cd7d59366b35a4 129 PIRSF PIRSF000178 1 128 9.6E-21 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_13265 2d0913a6e931cbac33cd7d59366b35a4 129 SUPERFAMILY SSF81343 22 127 9.37E-26 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_13265 2d0913a6e931cbac33cd7d59366b35a4 129 Gene3D G3DSA:1.20.1300.10 1 128 3.2E-34 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_13390 8be1a1e426086f7e73113c0b80fa116c 284 SUPERFAMILY SSF51717 11 280 1.57E-98 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13390 8be1a1e426086f7e73113c0b80fa116c 284 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 25 40 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13390 8be1a1e426086f7e73113c0b80fa116c 284 Pfam PF00809 Pterin binding enzyme 26 265 1.9E-82 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13390 8be1a1e426086f7e73113c0b80fa116c 284 Gene3D G3DSA:3.20.20.20 3 283 5.0E-111 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13390 8be1a1e426086f7e73113c0b80fa116c 284 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 25 280 2.3E-96 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 C3Y93_13390 8be1a1e426086f7e73113c0b80fa116c 284 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 59 72 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_09860 cf616ba04ca592ba566f41f3808ed69e 456 Gene3D G3DSA:3.90.190.20 318 454 3.0E-32 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3Y93_09860 cf616ba04ca592ba566f41f3808ed69e 456 Pfam PF08245 Mur ligase middle domain 108 295 1.9E-21 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C3Y93_09860 cf616ba04ca592ba566f41f3808ed69e 456 SUPERFAMILY SSF53244 314 452 1.1E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3Y93_09860 cf616ba04ca592ba566f41f3808ed69e 456 Gene3D G3DSA:3.40.50.720 1 90 7.7E-34 T 14-10-2018 C3Y93_09860 cf616ba04ca592ba566f41f3808ed69e 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 363 1.7E-10 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C3Y93_09860 cf616ba04ca592ba566f41f3808ed69e 456 SUPERFAMILY SSF53623 97 312 5.36E-51 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3Y93_09860 cf616ba04ca592ba566f41f3808ed69e 456 Pfam PF01225 Mur ligase family, catalytic domain 2 99 1.2E-16 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 C3Y93_09860 cf616ba04ca592ba566f41f3808ed69e 456 Gene3D G3DSA:3.40.1190.10 91 317 2.0E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3Y93_09860 cf616ba04ca592ba566f41f3808ed69e 456 SUPERFAMILY SSF51984 1 90 2.09E-21 T 14-10-2018 C3Y93_09860 cf616ba04ca592ba566f41f3808ed69e 456 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 453 57.429 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 C3Y93_09860 cf616ba04ca592ba566f41f3808ed69e 456 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 453 1.5E-204 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 C3Y93_00915 53e2a7aa55a7470c70aeac70f9f69811 509 Gene3D G3DSA:3.40.1090.20 256 387 1.3E-6 T 14-10-2018 C3Y93_00915 53e2a7aa55a7470c70aeac70f9f69811 509 Pfam PF11815 Domain of unknown function (DUF3336) 16 150 3.2E-37 T 14-10-2018 IPR021771 Triacylglycerol lipase GO:0004806|GO:0006629 C3Y93_00915 53e2a7aa55a7470c70aeac70f9f69811 509 SUPERFAMILY SSF52151 157 489 2.28E-45 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase C3Y93_00915 53e2a7aa55a7470c70aeac70f9f69811 509 Pfam PF01734 Patatin-like phospholipase 158 340 8.0E-24 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 C3Y93_00915 53e2a7aa55a7470c70aeac70f9f69811 509 Gene3D G3DSA:3.40.1090.10 146 255 3.0E-12 T 14-10-2018 C3Y93_07350 fdf0dff6bfc7030e0e0a585d30aaa0fd 734 Gene3D G3DSA:2.30.42.10 268 353 9.5E-11 T 14-10-2018 C3Y93_07350 fdf0dff6bfc7030e0e0a585d30aaa0fd 734 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 574 722 1.2E-30 T 14-10-2018 IPR020992 Tail specific protease, C-terminal C3Y93_07350 fdf0dff6bfc7030e0e0a585d30aaa0fd 734 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 274 351 7.2E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3Y93_07350 fdf0dff6bfc7030e0e0a585d30aaa0fd 734 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 236 589 3.5E-74 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 C3Y93_07350 fdf0dff6bfc7030e0e0a585d30aaa0fd 734 Gene3D G3DSA:3.90.226.10 359 589 1.0E-52 T 14-10-2018 C3Y93_07350 fdf0dff6bfc7030e0e0a585d30aaa0fd 734 Pfam PF03572 Peptidase family S41 395 568 6.9E-41 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 C3Y93_07350 fdf0dff6bfc7030e0e0a585d30aaa0fd 734 SMART SM00245 360 570 6.1E-35 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 C3Y93_07350 fdf0dff6bfc7030e0e0a585d30aaa0fd 734 SMART SM00228 276 356 4.7E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3Y93_07350 fdf0dff6bfc7030e0e0a585d30aaa0fd 734 SUPERFAMILY SSF52096 225 574 7.12E-52 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_07350 fdf0dff6bfc7030e0e0a585d30aaa0fd 734 SUPERFAMILY SSF50156 272 357 4.02E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3Y93_10730 21b25c697efbdd4591ac30017faafd54 628 SUPERFAMILY SSF50974 61 281 1.44E-19 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 C3Y93_10730 21b25c697efbdd4591ac30017faafd54 628 Gene3D G3DSA:2.130.10.10 54 348 1.1E-16 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C3Y93_00840 51fccd73a959c8333ad68ab5a65b4721 333 Pfam PF01180 Dihydroorotate dehydrogenase 44 329 1.5E-85 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 C3Y93_00840 51fccd73a959c8333ad68ab5a65b4721 333 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 77 96 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 C3Y93_00840 51fccd73a959c8333ad68ab5a65b4721 333 PIRSF PIRSF000164 14 333 1.1E-93 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 C3Y93_00840 51fccd73a959c8333ad68ab5a65b4721 333 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 331 6.9E-126 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 C3Y93_00840 51fccd73a959c8333ad68ab5a65b4721 333 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 289 309 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 C3Y93_00840 51fccd73a959c8333ad68ab5a65b4721 333 SUPERFAMILY SSF51395 1 332 9.53E-105 T 14-10-2018 C3Y93_00840 51fccd73a959c8333ad68ab5a65b4721 333 Gene3D G3DSA:3.20.20.70 2 332 2.1E-130 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_00840 51fccd73a959c8333ad68ab5a65b4721 333 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 333 50.215 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 C3Y93_01705 a878f5c599b8553cf0e2f8fad5e5b164 183 Gene3D G3DSA:3.30.700.10 11 140 1.9E-8 T 14-10-2018 C3Y93_01705 a878f5c599b8553cf0e2f8fad5e5b164 183 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 7.0E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_01705 a878f5c599b8553cf0e2f8fad5e5b164 183 PRINTS PR00885 Bacterial general secretion pathway protein H signature 144 159 4.6E-10 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 C3Y93_01705 a878f5c599b8553cf0e2f8fad5e5b164 183 PRINTS PR00885 Bacterial general secretion pathway protein H signature 6 20 4.6E-10 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 C3Y93_01705 a878f5c599b8553cf0e2f8fad5e5b164 183 PRINTS PR00885 Bacterial general secretion pathway protein H signature 21 35 4.6E-10 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 C3Y93_01705 a878f5c599b8553cf0e2f8fad5e5b164 183 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_01705 a878f5c599b8553cf0e2f8fad5e5b164 183 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 1.6E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_01705 a878f5c599b8553cf0e2f8fad5e5b164 183 SUPERFAMILY SSF54523 11 103 1.8E-11 T 14-10-2018 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 Gene3D G3DSA:2.40.40.20 799 889 2.7E-5 T 14-10-2018 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 SUPERFAMILY SSF50692 790 878 3.39E-9 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 SMART SM00929 88 128 1.8E-17 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 Pfam PF00384 Molybdopterin oxidoreductase 296 628 4.4E-8 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 645 2.4E-199 T 14-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 SMART SM00926 221 275 3.2E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 SUPERFAMILY SSF54292 1 77 2.88E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 2.6E-11 T 14-10-2018 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 SUPERFAMILY SSF53706 219 679 3.14E-81 T 14-10-2018 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 1.0E-10 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 126 6.6E-14 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 Gene3D G3DSA:2.20.25.90 221 275 2.9E-13 T 14-10-2018 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 Gene3D G3DSA:3.40.50.740 492 679 4.1E-12 T 14-10-2018 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 Gene3D G3DSA:3.10.20.740 1 128 6.0E-29 T 14-10-2018 C3Y93_05900 2be070eeb6817a3bd6b1e13c07fee9f6 894 SUPERFAMILY SSF54862 82 211 2.76E-31 T 14-10-2018 C3Y93_07905 63e9fa913766ec47e0f5a673842001a9 616 SMART SM00490 268 349 5.6E-32 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_07905 63e9fa913766ec47e0f5a673842001a9 616 Pfam PF00270 DEAD/DEAH box helicase 27 201 6.1E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C3Y93_07905 63e9fa913766ec47e0f5a673842001a9 616 SUPERFAMILY SSF52540 84 369 9.0E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_07905 63e9fa913766ec47e0f5a673842001a9 616 Gene3D G3DSA:3.40.50.300 228 389 2.0E-46 T 14-10-2018 C3Y93_07905 63e9fa913766ec47e0f5a673842001a9 616 Pfam PF00271 Helicase conserved C-terminal domain 250 349 2.5E-25 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_07905 63e9fa913766ec47e0f5a673842001a9 616 SMART SM00487 22 231 7.6E-53 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3Y93_07905 63e9fa913766ec47e0f5a673842001a9 616 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 162 170 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site C3Y93_07905 63e9fa913766ec47e0f5a673842001a9 616 Gene3D G3DSA:3.40.50.300 1 227 1.2E-71 T 14-10-2018 C3Y93_09485 ed43c722906abc600d3a4311b3932089 208 Pfam PF00857 Isochorismatase family 7 199 3.2E-33 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 C3Y93_09485 ed43c722906abc600d3a4311b3932089 208 SUPERFAMILY SSF52499 5 207 2.09E-49 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 C3Y93_09485 ed43c722906abc600d3a4311b3932089 208 Gene3D G3DSA:3.40.50.850 4 207 4.6E-76 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 C3Y93_07735 c2a19af5fcafa1f07653671c626df598 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 100 4.2E-21 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07735 c2a19af5fcafa1f07653671c626df598 105 Pfam PF00467 KOW motif 6 34 1.1E-6 T 14-10-2018 IPR005824 KOW C3Y93_07735 c2a19af5fcafa1f07653671c626df598 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07735 c2a19af5fcafa1f07653671c626df598 105 SUPERFAMILY SSF50104 3 99 9.03E-30 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C3Y93_07735 c2a19af5fcafa1f07653671c626df598 105 SMART SM00739 3 30 3.1E-6 T 14-10-2018 IPR005824 KOW C3Y93_07735 c2a19af5fcafa1f07653671c626df598 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 95 19.436 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07735 c2a19af5fcafa1f07653671c626df598 105 Gene3D G3DSA:2.30.30.30 1 102 8.1E-35 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 C3Y93_07735 c2a19af5fcafa1f07653671c626df598 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 2.9E-34 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03550 3e0e29027b7ff96ef9e4d52950143ba3 375 Pfam PF02698 DUF218 domain 211 358 1.9E-20 T 14-10-2018 IPR003848 Domain of unknown function DUF218 C3Y93_03550 3e0e29027b7ff96ef9e4d52950143ba3 375 Gene3D G3DSA:3.40.50.620 235 330 2.4E-5 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_07195 67061674537cfa7f6caea4bfe3e890cb 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 153 314 3.4E-50 T 14-10-2018 IPR000160 GGDEF domain C3Y93_07195 67061674537cfa7f6caea4bfe3e890cb 323 SMART SM00267 142 318 2.3E-58 T 14-10-2018 IPR000160 GGDEF domain C3Y93_07195 67061674537cfa7f6caea4bfe3e890cb 323 Pfam PF08447 PAS fold 44 127 9.3E-15 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 C3Y93_07195 67061674537cfa7f6caea4bfe3e890cb 323 Gene3D G3DSA:3.30.70.270 140 319 4.7E-57 T 14-10-2018 C3Y93_07195 67061674537cfa7f6caea4bfe3e890cb 323 Gene3D G3DSA:3.30.450.20 27 139 1.1E-25 T 14-10-2018 C3Y93_07195 67061674537cfa7f6caea4bfe3e890cb 323 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 141 2.5E-11 T 14-10-2018 IPR000014 PAS domain C3Y93_07195 67061674537cfa7f6caea4bfe3e890cb 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 151 317 3.9E-55 T 14-10-2018 IPR000160 GGDEF domain C3Y93_07195 67061674537cfa7f6caea4bfe3e890cb 323 SMART SM00086 93 134 0.001 T 14-10-2018 IPR001610 PAC motif C3Y93_07195 67061674537cfa7f6caea4bfe3e890cb 323 SUPERFAMILY SSF55785 24 137 1.1E-17 T 14-10-2018 IPR035965 PAS domain superfamily C3Y93_07195 67061674537cfa7f6caea4bfe3e890cb 323 SUPERFAMILY SSF55073 157 319 5.89E-49 T 14-10-2018 IPR029787 Nucleotide cyclase C3Y93_11120 92f7b9bac79d03762eebd6bc6f11efdc 231 Pfam PF00687 Ribosomal protein L1p/L10e family 35 220 3.0E-49 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein C3Y93_11120 92f7b9bac79d03762eebd6bc6f11efdc 231 PIRSF PIRSF002155 1 227 3.5E-73 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_11120 92f7b9bac79d03762eebd6bc6f11efdc 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.0E-98 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 C3Y93_11120 92f7b9bac79d03762eebd6bc6f11efdc 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_11120 92f7b9bac79d03762eebd6bc6f11efdc 231 SUPERFAMILY SSF56808 6 226 5.49E-78 T 14-10-2018 IPR023674 Ribosomal protein L1-like C3Y93_11120 92f7b9bac79d03762eebd6bc6f11efdc 231 Gene3D G3DSA:3.30.190.20 25 221 1.1E-75 T 14-10-2018 C3Y93_11120 92f7b9bac79d03762eebd6bc6f11efdc 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 41.748 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 C3Y93_11120 92f7b9bac79d03762eebd6bc6f11efdc 231 Gene3D G3DSA:3.40.50.790 68 159 1.1E-75 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich C3Y93_08615 b94e2e67307c8c34e59eeb3a8ee1e4be 119 Gene3D G3DSA:1.10.1220.160 3 110 4.9E-17 T 14-10-2018 IPR038472 DndE superfamily C3Y93_08615 b94e2e67307c8c34e59eeb3a8ee1e4be 119 Pfam PF08870 DNA sulphur modification protein DndE 5 111 1.2E-26 T 14-10-2018 IPR014969 DNA sulphur modification protein DndE C3Y93_08615 b94e2e67307c8c34e59eeb3a8ee1e4be 119 TIGRFAM TIGR03184 DNA_S_dndE: DNA sulfur modification protein DndE 6 107 4.1E-29 T 14-10-2018 IPR014969 DNA sulphur modification protein DndE C3Y93_11005 8a10ffcb928296c0eb116092db717b5f 384 SUPERFAMILY SSF55874 248 377 1.27E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_11005 8a10ffcb928296c0eb116092db717b5f 384 Pfam PF06580 Histidine kinase 196 272 2.5E-25 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 C3Y93_11005 8a10ffcb928296c0eb116092db717b5f 384 Gene3D G3DSA:3.30.565.10 248 380 8.8E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_01080 34db60cde8c5683d45f7a653bf2f3708 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 315 331 1.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 C3Y93_01080 34db60cde8c5683d45f7a653bf2f3708 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 315 1.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 C3Y93_01080 34db60cde8c5683d45f7a653bf2f3708 339 SUPERFAMILY SSF46689 284 334 2.46E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_01080 34db60cde8c5683d45f7a653bf2f3708 339 Gene3D G3DSA:1.10.10.60 230 338 5.4E-21 T 14-10-2018 C3Y93_01080 34db60cde8c5683d45f7a653bf2f3708 339 SMART SM00342 249 331 7.7E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_01080 34db60cde8c5683d45f7a653bf2f3708 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 203 8.8E-32 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal C3Y93_01080 34db60cde8c5683d45f7a653bf2f3708 339 Pfam PF12833 Helix-turn-helix domain 258 332 8.8E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_01440 40bd8ec641b2fd039bd65e9afb4e70ef 352 Gene3D G3DSA:1.10.1610.10 22 345 1.0E-121 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 C3Y93_01440 40bd8ec641b2fd039bd65e9afb4e70ef 352 SUPERFAMILY SSF52733 2 345 8.5E-110 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 C3Y93_01440 40bd8ec641b2fd039bd65e9afb4e70ef 352 Pfam PF02277 Phosphoribosyltransferase 9 345 8.6E-125 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 C3Y93_01440 40bd8ec641b2fd039bd65e9afb4e70ef 352 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 12 345 3.4E-126 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 C3Y93_01440 40bd8ec641b2fd039bd65e9afb4e70ef 352 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 10 347 33.527 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 C3Y93_01440 40bd8ec641b2fd039bd65e9afb4e70ef 352 Gene3D G3DSA:3.40.50.10210 54 328 1.0E-121 T 14-10-2018 C3Y93_03755 f28e04494fc1c285d09624cd7a753c66 276 Pfam PF05175 Methyltransferase small domain 92 195 2.3E-15 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 C3Y93_03755 f28e04494fc1c285d09624cd7a753c66 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 17 273 1.4E-69 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 C3Y93_03755 f28e04494fc1c285d09624cd7a753c66 276 Gene3D G3DSA:3.40.50.150 84 274 2.4E-55 T 14-10-2018 C3Y93_03755 f28e04494fc1c285d09624cd7a753c66 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 273 40.926 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 C3Y93_03755 f28e04494fc1c285d09624cd7a753c66 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 269 9.8E-84 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 C3Y93_03755 f28e04494fc1c285d09624cd7a753c66 276 SUPERFAMILY SSF53335 15 271 1.4E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_03755 f28e04494fc1c285d09624cd7a753c66 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3Y93_03755 f28e04494fc1c285d09624cd7a753c66 276 Gene3D G3DSA:1.10.8.10 3 81 1.8E-15 T 14-10-2018 C3Y93_13170 8fc0d828927839e3478b90be847312b6 276 Pfam PF00288 GHMP kinases N terminal domain 84 140 8.2E-9 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 C3Y93_13170 8fc0d828927839e3478b90be847312b6 276 PIRSF PIRSF010376 1 269 7.7E-77 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 C3Y93_13170 8fc0d828927839e3478b90be847312b6 276 Gene3D G3DSA:3.30.230.10 1 155 1.6E-56 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3Y93_13170 8fc0d828927839e3478b90be847312b6 276 SUPERFAMILY SSF55060 156 270 3.12E-22 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily C3Y93_13170 8fc0d828927839e3478b90be847312b6 276 Gene3D G3DSA:3.30.70.890 158 274 3.7E-19 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily C3Y93_13170 8fc0d828927839e3478b90be847312b6 276 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 256 1.1E-77 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 C3Y93_13170 8fc0d828927839e3478b90be847312b6 276 SUPERFAMILY SSF54211 1 155 1.37E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_13170 8fc0d828927839e3478b90be847312b6 276 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 2 262 30.306 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 C3Y93_00890 c349c11dd68e8fcbfad6a09541def5d4 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.2E-24 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_00890 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 6.2E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_00890 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 6.2E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_00890 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 6.2E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_00890 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 6.2E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_00890 c349c11dd68e8fcbfad6a09541def5d4 71 Gene3D G3DSA:1.20.5.1150 16 54 1.2E-20 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_00890 c349c11dd68e8fcbfad6a09541def5d4 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_00890 c349c11dd68e8fcbfad6a09541def5d4 71 Pfam PF01165 Ribosomal protein S21 3 55 4.1E-22 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_00890 c349c11dd68e8fcbfad6a09541def5d4 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 5.0E-10 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_00890 c349c11dd68e8fcbfad6a09541def5d4 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.252 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_11165 eae2148868b0ac9e2f3705ed4fe42389 296 Gene3D G3DSA:3.40.50.1820 2 292 3.6E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_11165 eae2148868b0ac9e2f3705ed4fe42389 296 PRINTS PR00412 Epoxide hydrolase signature 262 284 8.9E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 C3Y93_11165 eae2148868b0ac9e2f3705ed4fe42389 296 PRINTS PR00412 Epoxide hydrolase signature 33 51 8.9E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 C3Y93_11165 eae2148868b0ac9e2f3705ed4fe42389 296 PRINTS PR00412 Epoxide hydrolase signature 99 112 8.9E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 C3Y93_11165 eae2148868b0ac9e2f3705ed4fe42389 296 SUPERFAMILY SSF53474 7 284 1.18E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_11165 eae2148868b0ac9e2f3705ed4fe42389 296 Pfam PF00561 alpha/beta hydrolase fold 27 138 3.2E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_05850 2b1f8688f26db79699ad549e39cb4453 191 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 2.0E-11 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3Y93_05850 2b1f8688f26db79699ad549e39cb4453 191 SUPERFAMILY SSF50249 2 67 2.45E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_05850 2b1f8688f26db79699ad549e39cb4453 191 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 35 - T 14-10-2018 IPR019844 Cold-shock conserved site C3Y93_05850 2b1f8688f26db79699ad549e39cb4453 191 SMART SM00357 4 67 2.1E-8 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 C3Y93_05850 2b1f8688f26db79699ad549e39cb4453 191 SMART SM00894 153 188 0.0068 T 14-10-2018 IPR008613 Excalibur calcium-binding domain C3Y93_05850 2b1f8688f26db79699ad549e39cb4453 191 Pfam PF05901 Excalibur calcium-binding domain 155 188 1.4E-9 T 14-10-2018 IPR008613 Excalibur calcium-binding domain C3Y93_05850 2b1f8688f26db79699ad549e39cb4453 191 Gene3D G3DSA:2.40.50.140 2 86 2.1E-14 T 14-10-2018 C3Y93_00775 54b22bc6b0317a8bdae09717549f80d8 65 Gene3D G3DSA:3.10.20.30 1 65 7.0E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3Y93_00775 54b22bc6b0317a8bdae09717549f80d8 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 5.0E-18 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis C3Y93_00775 54b22bc6b0317a8bdae09717549f80d8 65 Pfam PF02597 ThiS family 7 65 9.4E-12 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 C3Y93_00775 54b22bc6b0317a8bdae09717549f80d8 65 SUPERFAMILY SSF54285 2 64 6.54E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp C3Y93_05785 0e3816afc94161e1da73e5119b2f4f4a 166 Pfam PF13358 DDE superfamily endonuclease 4 139 2.2E-27 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain C3Y93_05785 0e3816afc94161e1da73e5119b2f4f4a 166 Gene3D G3DSA:3.30.420.470 3 165 6.7E-14 T 14-10-2018 C3Y93_01060 0e3816afc94161e1da73e5119b2f4f4a 166 Pfam PF13358 DDE superfamily endonuclease 4 139 2.2E-27 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain C3Y93_01060 0e3816afc94161e1da73e5119b2f4f4a 166 Gene3D G3DSA:3.30.420.470 3 165 6.7E-14 T 14-10-2018 C3Y93_06025 5f1e04bb71c642c5fd5690a988dd6332 491 Gene3D G3DSA:1.10.10.410 431 491 1.3E-25 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal C3Y93_06025 5f1e04bb71c642c5fd5690a988dd6332 491 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 16 490 2.8E-162 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 C3Y93_06025 5f1e04bb71c642c5fd5690a988dd6332 491 SUPERFAMILY SSF55931 17 308 1.24E-114 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 C3Y93_06025 5f1e04bb71c642c5fd5690a988dd6332 491 Pfam PF02934 GatB/GatE catalytic domain 18 300 2.0E-107 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 C3Y93_06025 5f1e04bb71c642c5fd5690a988dd6332 491 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 15 491 37.083 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 C3Y93_06025 5f1e04bb71c642c5fd5690a988dd6332 491 Pfam PF02637 GatB domain 341 490 2.6E-52 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 C3Y93_06025 5f1e04bb71c642c5fd5690a988dd6332 491 SUPERFAMILY SSF89095 309 416 2.35E-31 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 C3Y93_06025 5f1e04bb71c642c5fd5690a988dd6332 491 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 157 171 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 C3Y93_06025 5f1e04bb71c642c5fd5690a988dd6332 491 SMART SM00845 340 490 8.9E-80 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 C3Y93_06025 5f1e04bb71c642c5fd5690a988dd6332 491 Gene3D G3DSA:1.10.150.380 309 429 1.0E-32 T 14-10-2018 C3Y93_01730 6c12517a50758e58a9e23e96bd12e7ed 237 Gene3D G3DSA:3.40.470.10 1 237 4.3E-98 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3Y93_01730 6c12517a50758e58a9e23e96bd12e7ed 237 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 18 227 2.0E-82 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3Y93_01730 6c12517a50758e58a9e23e96bd12e7ed 237 SUPERFAMILY SSF52141 14 235 9.16E-90 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3Y93_01730 6c12517a50758e58a9e23e96bd12e7ed 237 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 17 234 40.339 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3Y93_01730 6c12517a50758e58a9e23e96bd12e7ed 237 Pfam PF03167 Uracil DNA glycosylase superfamily 67 222 3.6E-25 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3Y93_01730 6c12517a50758e58a9e23e96bd12e7ed 237 SMART SM00987 62 223 3.8E-35 T 14-10-2018 C3Y93_01730 6c12517a50758e58a9e23e96bd12e7ed 237 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 70 79 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3Y93_01730 6c12517a50758e58a9e23e96bd12e7ed 237 SMART SM00986 62 223 3.8E-35 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 150 1.6E-10 T 14-10-2018 C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 SMART SM00853 472 616 1.1E-46 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 SUPERFAMILY SSF55874 10 210 1.7E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 Gene3D G3DSA:3.30.565.10 10 224 2.6E-63 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 SUPERFAMILY SSF118116 467 658 8.89E-57 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 10 319 9.3E-95 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 Gene3D G3DSA:3.30.1370.100 516 611 2.4E-53 T 14-10-2018 C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 222 338 3.5E-36 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 9 656 26.726 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 Pfam PF08676 MutL C terminal dimerisation domain 468 616 8.4E-46 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 Gene3D G3DSA:3.30.230.10 226 338 1.3E-35 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 SMART SM01340 221 339 1.0E-51 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 SUPERFAMILY SSF54211 201 339 1.48E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 Gene3D G3DSA:2.30.42.20 474 653 2.4E-53 T 14-10-2018 C3Y93_01610 168b3a8f3cda1d5a54e3f99e0c656510 660 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 101 107 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site C3Y93_07815 228ca81f13d37dc63f685ec79443ebcc 403 Gene3D G3DSA:2.40.30.10 150 261 1.3E-34 T 14-10-2018 C3Y93_07815 228ca81f13d37dc63f685ec79443ebcc 403 SUPERFAMILY SSF63380 150 261 1.5E-27 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3Y93_07815 228ca81f13d37dc63f685ec79443ebcc 403 SUPERFAMILY SSF52343 260 399 6.02E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_07815 228ca81f13d37dc63f685ec79443ebcc 403 Pfam PF00175 Oxidoreductase NAD-binding domain 270 377 6.0E-13 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C3Y93_07815 228ca81f13d37dc63f685ec79443ebcc 403 Gene3D G3DSA:3.40.50.80 262 400 8.6E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_07815 228ca81f13d37dc63f685ec79443ebcc 403 SUPERFAMILY SSF46458 1 142 2.33E-34 T 14-10-2018 IPR009050 Globin-like superfamily C3Y93_07815 228ca81f13d37dc63f685ec79443ebcc 403 Pfam PF00970 Oxidoreductase FAD-binding domain 157 259 7.4E-7 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 C3Y93_07815 228ca81f13d37dc63f685ec79443ebcc 403 Gene3D G3DSA:1.10.490.10 1 143 5.1E-48 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 C3Y93_07815 228ca81f13d37dc63f685ec79443ebcc 403 PRINTS PR00410 Phenol hydroxylase reductase family signature 364 372 1.0E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_07815 228ca81f13d37dc63f685ec79443ebcc 403 PRINTS PR00410 Phenol hydroxylase reductase family signature 184 196 1.0E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_07815 228ca81f13d37dc63f685ec79443ebcc 403 PRINTS PR00410 Phenol hydroxylase reductase family signature 269 288 1.0E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_07815 228ca81f13d37dc63f685ec79443ebcc 403 Pfam PF00042 Globin 5 101 3.2E-7 T 14-10-2018 IPR000971 Globin GO:0020037 C3Y93_11350 6806afb2fc48525631ce0db6243fc4a0 263 ProSitePatterns PS00171 Triosephosphate isomerase active site. 176 186 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_11350 6806afb2fc48525631ce0db6243fc4a0 263 Pfam PF00121 Triosephosphate isomerase 9 255 7.0E-82 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_11350 6806afb2fc48525631ce0db6243fc4a0 263 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 6 258 55.323 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_11350 6806afb2fc48525631ce0db6243fc4a0 263 SUPERFAMILY SSF51351 7 259 8.51E-81 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_11350 6806afb2fc48525631ce0db6243fc4a0 263 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 10 249 2.9E-51 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_11350 6806afb2fc48525631ce0db6243fc4a0 263 Gene3D G3DSA:3.20.20.70 5 263 4.7E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_12760 c3b5f83dcb25a50939f4007a5c900bd9 255 Pfam PF03099 Biotin/lipoate A/B protein ligase family 30 141 8.5E-10 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 C3Y93_12760 c3b5f83dcb25a50939f4007a5c900bd9 255 Gene3D G3DSA:3.30.930.10 1 201 4.7E-38 T 14-10-2018 C3Y93_12760 c3b5f83dcb25a50939f4007a5c900bd9 255 SUPERFAMILY SSF55681 14 189 1.62E-35 T 14-10-2018 C3Y93_12760 c3b5f83dcb25a50939f4007a5c900bd9 255 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 23 244 1.8E-39 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3Y93_14015 6a33ff0235fe88c20069b4d22587aff2 811 Pfam PF00753 Metallo-beta-lactamase superfamily 557 629 1.3E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_14015 6a33ff0235fe88c20069b4d22587aff2 811 Pfam PF13567 Domain of unknown function (DUF4131) 33 189 4.1E-9 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 C3Y93_14015 6a33ff0235fe88c20069b4d22587aff2 811 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 118 785 9.3E-86 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 C3Y93_14015 6a33ff0235fe88c20069b4d22587aff2 811 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 265 456 9.6E-23 T 14-10-2018 IPR004477 ComEC/Rec2-related protein C3Y93_14015 6a33ff0235fe88c20069b4d22587aff2 811 Gene3D G3DSA:3.60.15.10 548 801 3.4E-52 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_14015 6a33ff0235fe88c20069b4d22587aff2 811 SUPERFAMILY SSF56281 549 802 3.17E-40 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_14015 6a33ff0235fe88c20069b4d22587aff2 811 Pfam PF03772 Competence protein 244 525 2.7E-57 T 14-10-2018 IPR004477 ComEC/Rec2-related protein C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 Pfam PF00476 DNA polymerase family A 547 917 5.0E-153 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 Gene3D G3DSA:1.20.1060.10 538 651 4.6E-39 T 14-10-2018 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 SMART SM00279 168 203 1.7E-13 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 Gene3D G3DSA:3.30.420.10 322 536 5.4E-72 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 5.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 PRINTS PR00868 DNA-polymerase family A (pol I) signature 671 686 5.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 PRINTS PR00868 DNA-polymerase family A (pol I) signature 747 772 5.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 PRINTS PR00868 DNA-polymerase family A (pol I) signature 648 670 5.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 PRINTS PR00868 DNA-polymerase family A (pol I) signature 784 795 5.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 PRINTS PR00868 DNA-polymerase family A (pol I) signature 838 854 5.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 PRINTS PR00868 DNA-polymerase family A (pol I) signature 866 879 5.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 716 5.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 PRINTS PR00868 DNA-polymerase family A (pol I) signature 723 736 5.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 SUPERFAMILY SSF47807 166 280 1.5E-32 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 Gene3D G3DSA:1.10.150.20 702 845 4.3E-110 T 14-10-2018 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 Gene3D G3DSA:3.30.70.370 657 915 4.3E-110 T 14-10-2018 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 165 1.9E-51 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 SUPERFAMILY SSF53098 328 513 4.34E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 TIGRFAM TIGR00593 pola: DNA polymerase I 5 919 1.4E-298 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 Pfam PF01612 3'-5' exonuclease 325 511 2.3E-36 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 Gene3D G3DSA:3.40.50.1010 5 272 1.2E-92 T 14-10-2018 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 259 1.7E-28 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 ProSitePatterns PS00447 DNA polymerase family A signature. 747 766 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 Gene3D G3DSA:1.10.150.20 169 241 1.2E-92 T 14-10-2018 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 SUPERFAMILY SSF88723 1 165 2.47E-52 T 14-10-2018 IPR029060 PIN-like domain superfamily C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 SMART SM00474 325 512 4.2E-39 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 SMART SM00475 1 256 1.0E-117 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 SMART SM00482 679 883 3.8E-104 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_06610 01fca817ca18b5bd67dd3f3c0799290b 919 SUPERFAMILY SSF56672 517 919 5.45E-153 T 14-10-2018 C3Y93_09670 547b4551fc90c829e6482e70efb90fc1 179 TIGRFAM TIGR00077 lspA: signal peptidase II 17 170 1.4E-40 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3Y93_09670 547b4551fc90c829e6482e70efb90fc1 179 ProSitePatterns PS00855 Signal peptidases II signature. 112 124 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3Y93_09670 547b4551fc90c829e6482e70efb90fc1 179 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 109 124 3.6E-19 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3Y93_09670 547b4551fc90c829e6482e70efb90fc1 179 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 145 161 3.6E-19 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3Y93_09670 547b4551fc90c829e6482e70efb90fc1 179 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 61 69 3.6E-19 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3Y93_09670 547b4551fc90c829e6482e70efb90fc1 179 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 15 170 17.284 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3Y93_09670 547b4551fc90c829e6482e70efb90fc1 179 Pfam PF01252 Signal peptidase (SPase) II 24 165 2.3E-37 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C3Y93_08530 46f3f6b9f787fd96f014c851e2a0510f 216 SUPERFAMILY SSF52172 1 181 7.09E-29 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_08530 46f3f6b9f787fd96f014c851e2a0510f 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_08530 46f3f6b9f787fd96f014c851e2a0510f 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_08530 46f3f6b9f787fd96f014c851e2a0510f 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_08530 46f3f6b9f787fd96f014c851e2a0510f 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_08530 46f3f6b9f787fd96f014c851e2a0510f 216 Pfam PF00072 Response regulator receiver domain 3 115 4.6E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_08530 46f3f6b9f787fd96f014c851e2a0510f 216 SMART SM00448 1 115 1.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_08530 46f3f6b9f787fd96f014c851e2a0510f 216 SMART SM00421 149 206 4.1E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_08530 46f3f6b9f787fd96f014c851e2a0510f 216 Gene3D G3DSA:3.40.50.12740 1 210 2.0E-54 T 14-10-2018 C3Y93_08530 46f3f6b9f787fd96f014c851e2a0510f 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.2E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1278 20.348 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 Gene3D G3DSA:3.40.50.880 965 1278 2.1E-133 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1023 1276 4.1E-105 T 14-10-2018 C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 SUPERFAMILY SSF109736 149 214 7.98E-21 T 14-10-2018 C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 Gene3D G3DSA:3.30.1330.10 208 415 6.0E-42 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 SUPERFAMILY SSF52317 1020 1277 3.74E-96 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 Pfam PF02769 AIR synthase related protein, C-terminal domain 425 583 1.6E-29 T 14-10-2018 IPR010918 PurM-like, C-terminal domain C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 954 8.3E-7 T 14-10-2018 IPR010918 PurM-like, C-terminal domain C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 SUPERFAMILY SSF56042 423 650 4.34E-52 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 SUPERFAMILY SSF82697 1 145 6.28E-31 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 SUPERFAMILY SSF55326 624 811 1.99E-64 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 Gene3D G3DSA:3.30.1330.10 611 799 1.2E-25 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 5 1276 0.0 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 SUPERFAMILY SSF56042 812 1018 7.03E-42 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 Gene3D G3DSA:1.10.8.750 147 207 1.2E-27 T 14-10-2018 C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 Gene3D G3DSA:3.90.650.10 416 600 2.5E-59 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 Gene3D G3DSA:3.90.650.10 801 964 8.0E-21 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 SUPERFAMILY SSF55326 215 423 5.93E-60 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3Y93_05070 18c6e7c365f5ce09288d49ebebda0fcf 1278 SMART SM01211 1023 1277 1.2E-153 T 14-10-2018 C3Y93_07775 3cd580c52056f6da12d9315c0443d3a1 274 SMART SM01382 124 251 4.6E-85 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 C3Y93_07775 3cd580c52056f6da12d9315c0443d3a1 274 Gene3D G3DSA:2.30.30.30 115 195 1.5E-30 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 C3Y93_07775 3cd580c52056f6da12d9315c0443d3a1 274 SUPERFAMILY SSF50104 126 269 6.62E-57 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C3Y93_07775 3cd580c52056f6da12d9315c0443d3a1 274 SUPERFAMILY SSF50249 3 124 2.64E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_07775 3cd580c52056f6da12d9315c0443d3a1 274 SMART SM01383 42 118 4.0E-46 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07775 3cd580c52056f6da12d9315c0443d3a1 274 PIRSF PIRSF002158 10 274 3.5E-103 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07775 3cd580c52056f6da12d9315c0443d3a1 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.5E-33 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07775 3cd580c52056f6da12d9315c0443d3a1 274 Gene3D G3DSA:4.10.950.10 196 273 3.6E-34 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07775 3cd580c52056f6da12d9315c0443d3a1 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 45.561 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 C3Y93_07775 3cd580c52056f6da12d9315c0443d3a1 274 Gene3D G3DSA:2.40.50.140 1 114 4.7E-49 T 14-10-2018 C3Y93_07775 3cd580c52056f6da12d9315c0443d3a1 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 8.0E-126 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 C3Y93_07775 3cd580c52056f6da12d9315c0443d3a1 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 249 7.7E-54 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 C3Y93_02750 353a09d1e46ee525b6c9b283ff1edfb8 177 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 177 1.4E-52 T 14-10-2018 IPR018636 Protein of unknown function DUF2058 C3Y93_02340 e164801b73e7c9ff7deea7e53814140c 455 Gene3D G3DSA:3.30.470.20 87 431 1.7E-147 T 14-10-2018 C3Y93_02340 e164801b73e7c9ff7deea7e53814140c 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.2E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3Y93_02340 e164801b73e7c9ff7deea7e53814140c 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 443 7.1E-209 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 C3Y93_02340 e164801b73e7c9ff7deea7e53814140c 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3Y93_02340 e164801b73e7c9ff7deea7e53814140c 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 320 4.2E-75 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3Y93_02340 e164801b73e7c9ff7deea7e53814140c 455 SUPERFAMILY SSF51246 329 442 2.51E-42 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C3Y93_02340 e164801b73e7c9ff7deea7e53814140c 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3Y93_02340 e164801b73e7c9ff7deea7e53814140c 455 SMART SM00878 334 440 3.9E-63 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3Y93_02340 e164801b73e7c9ff7deea7e53814140c 455 Gene3D G3DSA:3.40.50.20 1 85 6.7E-35 T 14-10-2018 C3Y93_02340 e164801b73e7c9ff7deea7e53814140c 455 SUPERFAMILY SSF56059 83 345 1.15E-68 T 14-10-2018 C3Y93_02340 e164801b73e7c9ff7deea7e53814140c 455 Gene3D G3DSA:3.30.1490.20 131 201 1.7E-147 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3Y93_02340 e164801b73e7c9ff7deea7e53814140c 455 Pfam PF02785 Biotin carboxylase C-terminal domain 334 440 3.3E-39 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3Y93_02340 e164801b73e7c9ff7deea7e53814140c 455 SUPERFAMILY SSF52440 1 113 2.23E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3Y93_05145 64c2d554e268037703a57b8d2f1dcd54 344 SUPERFAMILY SSF51556 2 342 5.11E-141 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3Y93_05145 64c2d554e268037703a57b8d2f1dcd54 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 245 256 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_05145 64c2d554e268037703a57b8d2f1dcd54 344 Hamap MF_00219 Dihydroorotase [pyrC]. 2 344 45.156 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_05145 64c2d554e268037703a57b8d2f1dcd54 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_05145 64c2d554e268037703a57b8d2f1dcd54 344 PIRSF PIRSF001237 1 344 3.9E-141 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_05145 64c2d554e268037703a57b8d2f1dcd54 344 Gene3D G3DSA:3.20.20.140 2 343 3.1E-107 T 14-10-2018 C3Y93_05145 64c2d554e268037703a57b8d2f1dcd54 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 8.5E-137 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_05145 64c2d554e268037703a57b8d2f1dcd54 344 Pfam PF01979 Amidohydrolase family 11 310 3.3E-18 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C3Y93_00235 093911abce057c3f45ed6d857b90d48d 275 ProSitePatterns PS00760 Signal peptidases I lysine active site. 127 139 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 C3Y93_00235 093911abce057c3f45ed6d857b90d48d 275 Gene3D G3DSA:2.170.230.10 136 218 3.3E-67 T 14-10-2018 C3Y93_00235 093911abce057c3f45ed6d857b90d48d 275 SUPERFAMILY SSF51306 59 261 1.57E-63 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily C3Y93_00235 093911abce057c3f45ed6d857b90d48d 275 Pfam PF00717 Peptidase S24-like 68 149 1.3E-19 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C C3Y93_00235 093911abce057c3f45ed6d857b90d48d 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 61 77 1.6E-24 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 C3Y93_00235 093911abce057c3f45ed6d857b90d48d 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 219 238 1.6E-24 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 C3Y93_00235 093911abce057c3f45ed6d857b90d48d 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 125 137 1.6E-24 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 C3Y93_00235 093911abce057c3f45ed6d857b90d48d 275 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 49 257 4.5E-47 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 C3Y93_00235 093911abce057c3f45ed6d857b90d48d 275 ProSitePatterns PS00501 Signal peptidases I serine active site. 70 77 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 C3Y93_00235 093911abce057c3f45ed6d857b90d48d 275 Pfam PF10502 Signal peptidase, peptidase S26 218 256 1.7E-5 T 14-10-2018 IPR019533 Peptidase S26 C3Y93_00235 093911abce057c3f45ed6d857b90d48d 275 Gene3D G3DSA:2.10.109.10 59 258 3.3E-67 T 14-10-2018 C3Y93_01330 80e2b4c14fa779849522a631d6660706 230 Pfam PF00072 Response regulator receiver domain 6 116 1.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_01330 80e2b4c14fa779849522a631d6660706 230 Gene3D G3DSA:1.10.10.10 125 228 1.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_01330 80e2b4c14fa779849522a631d6660706 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 9.1E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_01330 80e2b4c14fa779849522a631d6660706 230 SMART SM00448 4 116 5.0E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_01330 80e2b4c14fa779849522a631d6660706 230 SUPERFAMILY SSF52172 1 174 3.98E-37 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_01330 80e2b4c14fa779849522a631d6660706 230 Gene3D G3DSA:3.40.50.2300 1 124 7.4E-35 T 14-10-2018 C3Y93_01330 80e2b4c14fa779849522a631d6660706 230 SMART SM00862 150 224 1.7E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_02640 c11be6269560c7843738cdf03f36e168 457 Pfam PF07690 Major Facilitator Superfamily 29 338 2.1E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_02640 c11be6269560c7843738cdf03f36e168 457 SUPERFAMILY SSF103473 11 430 1.96E-84 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_02640 c11be6269560c7843738cdf03f36e168 457 Gene3D G3DSA:1.20.1250.20 20 431 6.6E-75 T 14-10-2018 C3Y93_02640 c11be6269560c7843738cdf03f36e168 457 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 8 403 2.5E-129 T 14-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 C3Y93_02640 c11be6269560c7843738cdf03f36e168 457 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C3Y93_13610 3f8cde249169ce88fdab4b17db0ce289 693 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 19 689 2.5E-289 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 C3Y93_13610 3f8cde249169ce88fdab4b17db0ce289 693 SUPERFAMILY SSF56024 327 504 1.73E-56 T 14-10-2018 C3Y93_13610 3f8cde249169ce88fdab4b17db0ce289 693 SUPERFAMILY SSF140356 17 121 3.92E-36 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 C3Y93_13610 3f8cde249169ce88fdab4b17db0ce289 693 SUPERFAMILY SSF143724 123 324 6.47E-65 T 14-10-2018 C3Y93_13610 3f8cde249169ce88fdab4b17db0ce289 693 PIRSF PIRSF015589 1 693 1.6E-280 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 C3Y93_13610 3f8cde249169ce88fdab4b17db0ce289 693 Pfam PF02503 Polyphosphate kinase middle domain 135 332 1.1E-61 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 C3Y93_13610 3f8cde249169ce88fdab4b17db0ce289 693 Gene3D G3DSA:3.30.870.10 327 510 3.7E-71 T 14-10-2018 C3Y93_13610 3f8cde249169ce88fdab4b17db0ce289 693 SUPERFAMILY SSF56024 511 691 9.42E-73 T 14-10-2018 C3Y93_13610 3f8cde249169ce88fdab4b17db0ce289 693 Gene3D G3DSA:3.30.1840.10 13 324 8.2E-104 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 C3Y93_13610 3f8cde249169ce88fdab4b17db0ce289 693 Pfam PF13089 Polyphosphate kinase N-terminal domain 20 125 1.0E-34 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 C3Y93_13610 3f8cde249169ce88fdab4b17db0ce289 693 Gene3D G3DSA:3.30.870.10 511 693 3.1E-69 T 14-10-2018 C3Y93_13610 3f8cde249169ce88fdab4b17db0ce289 693 Hamap MF_00347 Polyphosphate kinase [ppk]. 17 693 27.962 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 C3Y93_13610 3f8cde249169ce88fdab4b17db0ce289 693 Pfam PF13090 Polyphosphate kinase C-terminal domain 341 688 2.9E-155 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 C3Y93_03290 fa03fd45b4c011aaf0fdb24626368dd4 336 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 18 319 1.7E-111 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 C3Y93_03290 fa03fd45b4c011aaf0fdb24626368dd4 336 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 11 325 49.504 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 C3Y93_03290 fa03fd45b4c011aaf0fdb24626368dd4 336 Pfam PF05175 Methyltransferase small domain 156 240 3.8E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 C3Y93_03290 fa03fd45b4c011aaf0fdb24626368dd4 336 Gene3D G3DSA:3.40.50.150 109 307 5.6E-50 T 14-10-2018 C3Y93_03290 fa03fd45b4c011aaf0fdb24626368dd4 336 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 229 235 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3Y93_03290 fa03fd45b4c011aaf0fdb24626368dd4 336 PIRSF PIRSF037167 5 332 4.0E-135 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 C3Y93_03290 fa03fd45b4c011aaf0fdb24626368dd4 336 SUPERFAMILY SSF53335 21 317 1.98E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_03290 fa03fd45b4c011aaf0fdb24626368dd4 336 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 20 319 9.8E-75 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 C3Y93_10580 25d72f41c66b9db0be08fb6b0b33141a 514 SUPERFAMILY SSF50615 11 95 2.15E-27 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3Y93_10580 25d72f41c66b9db0be08fb6b0b33141a 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 3.6E-44 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10580 25d72f41c66b9db0be08fb6b0b33141a 514 SUPERFAMILY SSF52540 97 382 1.33E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_10580 25d72f41c66b9db0be08fb6b0b33141a 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 2.8E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3Y93_10580 25d72f41c66b9db0be08fb6b0b33141a 514 Gene3D G3DSA:1.20.150.20 384 514 4.4E-46 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10580 25d72f41c66b9db0be08fb6b0b33141a 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 7.0E-14 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3Y93_10580 25d72f41c66b9db0be08fb6b0b33141a 514 SUPERFAMILY SSF47917 384 512 1.18E-45 T 14-10-2018 C3Y93_10580 25d72f41c66b9db0be08fb6b0b33141a 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 49.561 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10580 25d72f41c66b9db0be08fb6b0b33141a 514 Gene3D G3DSA:3.40.50.300 95 383 2.5E-128 T 14-10-2018 C3Y93_10580 25d72f41c66b9db0be08fb6b0b33141a 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 512 1.8E-248 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10580 25d72f41c66b9db0be08fb6b0b33141a 514 Gene3D G3DSA:2.40.30.20 2 94 3.0E-31 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3Y93_10580 25d72f41c66b9db0be08fb6b0b33141a 514 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3Y93_02115 fb52a39668f1c64f6be9c89f4ab7b2d4 157 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 2.9E-46 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type C3Y93_02115 fb52a39668f1c64f6be9c89f4ab7b2d4 157 Pfam PF02082 Transcriptional regulator 1 83 1.4E-30 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type C3Y93_02115 fb52a39668f1c64f6be9c89f4ab7b2d4 157 SUPERFAMILY SSF46785 2 132 5.97E-38 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_02115 fb52a39668f1c64f6be9c89f4ab7b2d4 157 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site C3Y93_02115 fb52a39668f1c64f6be9c89f4ab7b2d4 157 Gene3D G3DSA:1.10.10.10 1 144 7.3E-53 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_04680 0590ea97643a61352aef6b9e7edcf5a4 317 Pfam PF11726 Inovirus Gp2 134 306 2.8E-16 T 14-10-2018 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 Pfam PF09334 tRNA synthetases class I (M) 40 176 3.4E-19 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 431 587 3.3E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 634 674 5.0E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 Gene3D G3DSA:1.10.730.10 13 803 0.0 T 14-10-2018 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 Gene3D G3DSA:3.10.20.590 814 873 1.4E-19 T 14-10-2018 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 131 148 1.6E-48 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 500 518 1.6E-48 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 157 173 1.6E-48 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 220 239 1.6E-48 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 189 202 1.6E-48 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 539 561 1.6E-48 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 572 582 1.6E-48 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 Gene3D G3DSA:3.10.330.110 582 644 0.0 T 14-10-2018 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 Pfam PF08264 Anticodon-binding domain of tRNA 717 835 3.1E-11 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 9 873 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 Gene3D G3DSA:3.90.740.10 232 427 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 Gene3D G3DSA:3.40.50.620 37 581 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 SUPERFAMILY SSF52374 9 684 7.04E-144 T 14-10-2018 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 SUPERFAMILY SSF47323 678 873 7.29E-25 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 SUPERFAMILY SSF50677 231 426 2.75E-51 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 226 416 1.5E-70 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 C3Y93_07125 e2b559fb31a86632bb9ef287fe4a9cc5 873 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 8 873 22.797 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C3Y93_13055 fe3ba6a076ea991a90ece32e6b765835 159 Pfam PF00588 SpoU rRNA Methylase family 2 147 5.2E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 C3Y93_13055 fe3ba6a076ea991a90ece32e6b765835 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 30.858 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 C3Y93_13055 fe3ba6a076ea991a90ece32e6b765835 159 SUPERFAMILY SSF75217 2 156 9.16E-42 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3Y93_13055 fe3ba6a076ea991a90ece32e6b765835 159 PIRSF PIRSF029256 1 159 2.2E-59 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 C3Y93_13055 fe3ba6a076ea991a90ece32e6b765835 159 Gene3D G3DSA:3.40.1280.10 1 159 5.2E-58 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3Y93_09650 0414ae373379193f3f8a188601b78745 225 SUPERFAMILY SSF48498 77 203 1.78E-33 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C3Y93_09650 0414ae373379193f3f8a188601b78745 225 Gene3D G3DSA:1.10.10.60 1 59 2.2E-18 T 14-10-2018 C3Y93_09650 0414ae373379193f3f8a188601b78745 225 SUPERFAMILY SSF46689 4 79 4.36E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_09650 0414ae373379193f3f8a188601b78745 225 Pfam PF08362 YcdC-like protein, C-terminal region 60 202 1.6E-51 T 14-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 C3Y93_09650 0414ae373379193f3f8a188601b78745 225 Gene3D G3DSA:1.10.357.10 60 203 1.1E-44 T 14-10-2018 C3Y93_09650 0414ae373379193f3f8a188601b78745 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_09650 0414ae373379193f3f8a188601b78745 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 3.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_09650 0414ae373379193f3f8a188601b78745 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 1.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_07545 9ef405010e8ae074a82f695d44c9b585 280 PRINTS PR00108 Thymidylate synthase family signature 131 150 3.4E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3Y93_07545 9ef405010e8ae074a82f695d44c9b585 280 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.4E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3Y93_07545 9ef405010e8ae074a82f695d44c9b585 280 PRINTS PR00108 Thymidylate synthase family signature 175 201 3.4E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3Y93_07545 9ef405010e8ae074a82f695d44c9b585 280 PRINTS PR00108 Thymidylate synthase family signature 157 172 3.4E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3Y93_07545 9ef405010e8ae074a82f695d44c9b585 280 PRINTS PR00108 Thymidylate synthase family signature 213 230 3.4E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3Y93_07545 9ef405010e8ae074a82f695d44c9b585 280 ProSitePatterns PS00091 Thymidylate synthase active site. 142 170 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3Y93_07545 9ef405010e8ae074a82f695d44c9b585 280 Pfam PF00303 Thymidylate synthase 3 280 6.1E-119 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3Y93_07545 9ef405010e8ae074a82f695d44c9b585 280 SUPERFAMILY SSF55831 1 280 6.28E-129 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3Y93_07545 9ef405010e8ae074a82f695d44c9b585 280 Gene3D G3DSA:3.30.572.10 1 280 2.1E-132 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3Y93_07545 9ef405010e8ae074a82f695d44c9b585 280 Hamap MF_00008 Thymidylate synthase [thyA]. 1 280 39.966 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3Y93_07545 9ef405010e8ae074a82f695d44c9b585 280 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 280 5.4E-140 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C3Y93_01430 70bd522d501d8f3750768d4f90a18034 208 Gene3D G3DSA:3.90.1140.10 32 205 5.1E-11 T 14-10-2018 C3Y93_01430 70bd522d501d8f3750768d4f90a18034 208 SUPERFAMILY SSF55144 35 180 1.5E-11 T 14-10-2018 IPR009097 Cyclic phosphodiesterase C3Y93_01430 70bd522d501d8f3750768d4f90a18034 208 Pfam PF13563 2'-5' RNA ligase superfamily 43 179 9.9E-12 T 14-10-2018 C3Y93_06265 ab43777dbd082d3ffb3c3dadde406162 241 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 4 238 2.2E-44 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 C3Y93_06265 ab43777dbd082d3ffb3c3dadde406162 241 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 3 240 20.611 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 C3Y93_06265 ab43777dbd082d3ffb3c3dadde406162 241 Gene3D G3DSA:2.160.20.70 130 241 9.2E-28 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 C3Y93_06265 ab43777dbd082d3ffb3c3dadde406162 241 SUPERFAMILY SSF63848 135 233 1.02E-27 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 C3Y93_06265 ab43777dbd082d3ffb3c3dadde406162 241 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 137 232 7.2E-27 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 C3Y93_11760 b21a30febda555e759f5cccb0299de0c 265 Gene3D G3DSA:3.90.850.10 3 264 1.3E-79 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 C3Y93_11760 b21a30febda555e759f5cccb0299de0c 265 SUPERFAMILY SSF56529 6 262 9.16E-71 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 C3Y93_11760 b21a30febda555e759f5cccb0299de0c 265 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 84 260 4.5E-11 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 C3Y93_04350 4ff99c408fa7cdbb2ed2be2a01838a1b 259 Pfam PF03883 Peroxide stress protein YaaA 1 243 9.0E-89 T 14-10-2018 IPR005583 Peroxide stress protein YaaA C3Y93_04350 4ff99c408fa7cdbb2ed2be2a01838a1b 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 36.768 T 14-10-2018 IPR005583 Peroxide stress protein YaaA C3Y93_09360 f9515e833b713869ca7ea3a81ad44890 525 Gene3D G3DSA:3.30.590.20 19 525 5.0E-175 T 14-10-2018 C3Y93_09360 f9515e833b713869ca7ea3a81ad44890 525 SUPERFAMILY SSF55931 10 522 1.11E-176 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 C3Y93_09360 f9515e833b713869ca7ea3a81ad44890 525 Pfam PF04262 Glutamate-cysteine ligase 18 388 1.8E-146 T 14-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 C3Y93_09360 f9515e833b713869ca7ea3a81ad44890 525 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 18 524 4.3E-164 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 C3Y93_09360 f9515e833b713869ca7ea3a81ad44890 525 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 525 183.91 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 C3Y93_00720 0628a6e35c079d3308da1a7001989c62 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 385 1.2E-37 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3Y93_00720 0628a6e35c079d3308da1a7001989c62 390 SUPERFAMILY SSF47203 233 388 3.38E-42 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3Y93_00720 0628a6e35c079d3308da1a7001989c62 390 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 C3Y93_00720 0628a6e35c079d3308da1a7001989c62 390 SUPERFAMILY SSF56645 5 247 2.23E-86 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3Y93_00720 0628a6e35c079d3308da1a7001989c62 390 Gene3D G3DSA:1.10.540.10 2 125 2.4E-46 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3Y93_00720 0628a6e35c079d3308da1a7001989c62 390 Gene3D G3DSA:2.40.110.10 126 238 2.0E-44 T 14-10-2018 C3Y93_00720 0628a6e35c079d3308da1a7001989c62 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 123 3.9E-37 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3Y93_00720 0628a6e35c079d3308da1a7001989c62 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 C3Y93_00720 0628a6e35c079d3308da1a7001989c62 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 1.7E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3Y93_00720 0628a6e35c079d3308da1a7001989c62 390 Gene3D G3DSA:1.20.140.10 239 387 6.2E-42 T 14-10-2018 C3Y93_00720 0628a6e35c079d3308da1a7001989c62 390 PIRSF PIRSF016578 13 390 1.9E-15 T 14-10-2018 C3Y93_02190 929b2fc2f81f774c8a8214b1028cd0eb 198 SUPERFAMILY SSF111304 2 197 4.05E-75 T 14-10-2018 IPR023627 Recombination protein RecR C3Y93_02190 929b2fc2f81f774c8a8214b1028cd0eb 198 Pfam PF02132 RecR protein 41 77 8.2E-13 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger C3Y93_02190 929b2fc2f81f774c8a8214b1028cd0eb 198 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 C3Y93_02190 929b2fc2f81f774c8a8214b1028cd0eb 198 Gene3D G3DSA:3.40.1360.10 76 197 2.7E-44 T 14-10-2018 C3Y93_02190 929b2fc2f81f774c8a8214b1028cd0eb 198 Pfam PF13662 Toprim domain 81 170 2.8E-24 T 14-10-2018 IPR006171 TOPRIM domain C3Y93_02190 929b2fc2f81f774c8a8214b1028cd0eb 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 96.029 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 C3Y93_02190 929b2fc2f81f774c8a8214b1028cd0eb 198 SMART SM00493 79 164 6.7E-18 T 14-10-2018 IPR006171 TOPRIM domain C3Y93_02190 929b2fc2f81f774c8a8214b1028cd0eb 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 194 3.3E-74 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 C3Y93_02190 929b2fc2f81f774c8a8214b1028cd0eb 198 Gene3D G3DSA:1.10.8.420 2 51 1.1E-13 T 14-10-2018 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 6 646 8.9E-286 T 14-10-2018 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 Gene3D G3DSA:2.120.10.90 533 661 4.4E-39 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 Gene3D G3DSA:2.120.10.90 687 951 7.9E-68 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 952 23.291 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 30 509 2.6E-152 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 Gene3D G3DSA:1.10.268.10 368 496 1.7E-220 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 Gene3D G3DSA:3.90.199.10 31 524 1.7E-220 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 SUPERFAMILY SSF56719 28 525 4.84E-174 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 SUPERFAMILY SSF101904 713 962 1.96E-58 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 SMART SM00434 9 502 1.6E-266 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 905 950 1.3E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 543 588 5.5E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 779 812 5.5E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 640 3.1E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 731 774 1.6E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 854 900 6.3E-16 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 Gene3D G3DSA:3.30.1360.40 234 331 1.7E-220 T 14-10-2018 C3Y93_13935 be9052ae3793e6d4b2b06f5d24d7d900 991 SUPERFAMILY SSF101904 536 642 1.2E-33 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 626 44.09 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 417 430 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 Pfam PF04545 Sigma-70, region 4 561 614 5.4E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 Gene3D G3DSA:1.10.10.10 466 541 1.1E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 389 625 2.9E-122 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 Gene3D G3DSA:1.10.601.10 115 462 2.1E-127 T 14-10-2018 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 SUPERFAMILY SSF88659 466 539 1.4E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 SUPERFAMILY SSF88659 523 625 4.3E-27 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 586 612 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 Gene3D G3DSA:1.10.10.10 542 627 2.9E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 389 614 4.5E-38 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 PRINTS PR00046 Major sigma-70 factor signature 601 612 5.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 PRINTS PR00046 Major sigma-70 factor signature 565 577 5.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 PRINTS PR00046 Major sigma-70 factor signature 441 449 5.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 PRINTS PR00046 Major sigma-70 factor signature 586 601 5.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 PRINTS PR00046 Major sigma-70 factor signature 417 430 5.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 Gene3D G3DSA:1.10.220.120 4 66 7.1E-26 T 14-10-2018 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 Pfam PF00140 Sigma-70 factor, region 1.2 100 130 2.2E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 Pfam PF04542 Sigma-70 region 2 393 462 1.8E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 Pfam PF04539 Sigma-70 region 3 472 548 4.4E-31 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 Pfam PF04546 Sigma-70, non-essential region 141 362 7.0E-52 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 SUPERFAMILY SSF88946 117 460 1.57E-92 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C3Y93_13085 ce01ddcfba1becf2f70c43a5621a1c9c 628 Pfam PF03979 Sigma-70 factor, region 1.1 8 83 2.7E-27 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 C3Y93_01580 b3202c69698c3b3234889c0a7ce8d068 151 Pfam PF04284 Protein of unknown function (DUF441) 10 148 6.4E-47 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame C3Y93_01580 b3202c69698c3b3234889c0a7ce8d068 151 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 6 151 18.752 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame C3Y93_01580 b3202c69698c3b3234889c0a7ce8d068 151 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 17 133 4.0E-36 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame C3Y93_10915 77cb818a78f0821e37859d148f7f1c00 271 Pfam PF13098 Thioredoxin-like domain 148 269 4.7E-24 T 14-10-2018 IPR012336 Thioredoxin-like fold C3Y93_10915 77cb818a78f0821e37859d148f7f1c00 271 Gene3D G3DSA:3.40.30.10 120 271 1.1E-39 T 14-10-2018 C3Y93_10915 77cb818a78f0821e37859d148f7f1c00 271 Pfam PF10411 Disulfide bond isomerase protein N-terminus 63 117 7.2E-12 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal C3Y93_10915 77cb818a78f0821e37859d148f7f1c00 271 SUPERFAMILY SSF54423 63 118 2.55E-8 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 C3Y93_10915 77cb818a78f0821e37859d148f7f1c00 271 SUPERFAMILY SSF52833 131 271 3.78E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_10915 77cb818a78f0821e37859d148f7f1c00 271 Gene3D G3DSA:3.10.450.70 56 119 8.6E-7 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 C3Y93_08280 a80f4b166140aee99ff98b8cee22dc8a 236 PIRSF PIRSF016482 20 236 1.5E-58 T 14-10-2018 IPR007445 Pilus assembly protein, PilO C3Y93_08280 a80f4b166140aee99ff98b8cee22dc8a 236 Gene3D G3DSA:3.30.70.60 118 229 1.7E-33 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 C3Y93_08280 a80f4b166140aee99ff98b8cee22dc8a 236 Pfam PF04350 Pilus assembly protein, PilO 74 220 1.2E-49 T 14-10-2018 IPR007445 Pilus assembly protein, PilO C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 Pfam PF01627 Hpt domain 833 924 5.2E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 Gene3D G3DSA:3.40.50.2300 646 793 1.4E-39 T 14-10-2018 C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 Pfam PF00512 His Kinase A (phospho-acceptor) domain 288 354 3.1E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 SMART SM00387 401 522 7.2E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 SUPERFAMILY SSF55874 343 517 6.02E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 Gene3D G3DSA:1.20.120.160 810 936 9.8E-22 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 Gene3D G3DSA:3.30.565.10 353 526 4.6E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 SMART SM00388 288 354 3.9E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 SUPERFAMILY SSF47226 770 891 2.22E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 Gene3D G3DSA:1.10.287.130 250 352 9.6E-27 T 14-10-2018 C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 SUPERFAMILY SSF47384 274 355 1.41E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 SUPERFAMILY SSF52172 662 795 8.4E-34 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 1.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 1.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 495 1.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 SMART SM00073 823 920 0.0028 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 SMART SM00448 664 787 2.6E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 Pfam PF00072 Response regulator receiver domain 666 787 9.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_07250 635e9e1869134d5c70b0661a2b9c8fc9 939 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 519 1.5E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_07490 c96b378ee49fc3a50f84347098d1634c 197 Pfam PF07021 Methionine biosynthesis protein MetW 2 194 5.4E-76 T 14-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 C3Y93_07490 c96b378ee49fc3a50f84347098d1634c 197 SUPERFAMILY SSF53335 9 173 1.15E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_07490 c96b378ee49fc3a50f84347098d1634c 197 Gene3D G3DSA:3.40.50.150 3 186 2.1E-27 T 14-10-2018 C3Y93_07490 c96b378ee49fc3a50f84347098d1634c 197 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 2 195 1.0E-79 T 14-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 C3Y93_12660 65895446e097b8802128176e80b9fa3c 310 Pfam PF03547 Membrane transport protein 156 302 4.5E-18 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 C3Y93_12660 65895446e097b8802128176e80b9fa3c 310 Pfam PF03547 Membrane transport protein 6 146 6.9E-11 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 C3Y93_10960 7089494321c6e2e1e28340b10b1171fa 175 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 56 164 7.2E-51 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 C3Y93_10960 7089494321c6e2e1e28340b10b1171fa 175 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 52 174 29.021 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 C3Y93_10960 7089494321c6e2e1e28340b10b1171fa 175 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 134 167 1.1E-11 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 C3Y93_10960 7089494321c6e2e1e28340b10b1171fa 175 PRINTS PR00618 DksA/TraR zinc finger signature 150 162 8.5E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria C3Y93_10960 7089494321c6e2e1e28340b10b1171fa 175 PRINTS PR00618 DksA/TraR zinc finger signature 138 149 8.5E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria C3Y93_10960 7089494321c6e2e1e28340b10b1171fa 175 Gene3D G3DSA:1.20.120.910 45 174 3.6E-36 T 14-10-2018 C3Y93_10960 7089494321c6e2e1e28340b10b1171fa 175 SUPERFAMILY SSF109635 40 134 2.75E-34 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily C3Y93_10960 7089494321c6e2e1e28340b10b1171fa 175 SUPERFAMILY SSF57716 135 172 3.28E-10 T 14-10-2018 C3Y93_10960 7089494321c6e2e1e28340b10b1171fa 175 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 138 162 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site C3Y93_05135 efdbd8cf099a2f757385478e718e2fe8 132 SUPERFAMILY SSF143422 1 131 1.96E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C3Y93_05135 efdbd8cf099a2f757385478e718e2fe8 132 SMART SM01321 11 130 2.6E-40 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C3Y93_05135 efdbd8cf099a2f757385478e718e2fe8 132 Pfam PF01797 Transposase IS200 like 12 130 1.4E-39 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C3Y93_05135 efdbd8cf099a2f757385478e718e2fe8 132 Gene3D G3DSA:3.30.70.1290 1 132 1.4E-42 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 Gene3D G3DSA:3.30.470.20 119 403 1.1E-129 T 14-10-2018 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 SMART SM01096 424 547 1.8E-72 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 SUPERFAMILY SSF52440 1 127 2.16E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 SMART SM00851 961 1047 1.8E-34 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 SUPERFAMILY SSF56059 128 401 1.77E-109 T 14-10-2018 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 SUPERFAMILY SSF48108 397 554 9.02E-53 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.2E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.2E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.2E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.2E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.2E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.2E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.2E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 Gene3D G3DSA:3.40.50.20 554 662 2.0E-48 T 14-10-2018 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.159 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 SUPERFAMILY SSF56059 673 933 1.43E-104 T 14-10-2018 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.6E-73 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 3.9E-37 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.6E-39 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 Gene3D G3DSA:3.40.50.1380 945 1075 2.4E-37 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1073 13.443 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 Pfam PF02142 MGS-like domain 963 1047 8.8E-21 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 Gene3D G3DSA:1.10.1030.10 404 553 3.2E-48 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 Gene3D G3DSA:3.30.470.20 665 935 5.6E-121 T 14-10-2018 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1059 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 SUPERFAMILY SSF52440 558 675 7.48E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 SUPERFAMILY SSF52335 947 1073 3.14E-41 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily C3Y93_13355 4e6cc3c706aaf29d925cfc7c34eea757 1076 Gene3D G3DSA:3.40.50.20 1 116 2.5E-50 T 14-10-2018 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 SUPERFAMILY SSF75615 115 210 8.76E-25 T 14-10-2018 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 PIRSF PIRSF036426 1 456 4.6E-201 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 Gene3D G3DSA:3.30.160.110 114 149 1.1E-14 T 14-10-2018 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 SUPERFAMILY SSF53790 212 456 5.37E-82 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 3.5E-53 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 Pfam PF13241 Putative NAD(P)-binding 7 116 8.7E-26 T 14-10-2018 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 Gene3D G3DSA:1.10.8.210 150 211 9.7E-10 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 Gene3D G3DSA:3.30.950.10 332 456 4.4E-48 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 SUPERFAMILY SSF51735 2 113 7.88E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_13050 8722640b15a056ae91707f11a3901583 456 Gene3D G3DSA:3.40.50.720 1 113 2.4E-28 T 14-10-2018 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 451 1.1E-96 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 208 1.7E-61 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 Pfam PF10414 Sirohaem synthase dimerisation region 152 208 5.4E-18 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 Gene3D G3DSA:3.40.1010.10 215 331 1.3E-46 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 Hamap MF_01646 Siroheme synthase [cysG]. 1 456 50.172 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3Y93_13050 8722640b15a056ae91707f11a3901583 456 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C3Y93_07360 c57ab42a1f442f39c7452dc29e576420 296 Gene3D G3DSA:3.40.50.150 39 281 3.8E-20 T 14-10-2018 C3Y93_07360 c57ab42a1f442f39c7452dc29e576420 296 Pfam PF04072 Leucine carboxyl methyltransferase 64 191 1.3E-11 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 C3Y93_07360 c57ab42a1f442f39c7452dc29e576420 296 SUPERFAMILY SSF53335 63 265 1.52E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_05050 963c0eb2a7294b2ce98a9ed67e342b64 759 Gene3D G3DSA:3.40.50.10950 442 748 2.8E-93 T 14-10-2018 C3Y93_05050 963c0eb2a7294b2ce98a9ed67e342b64 759 SMART SM00919 164 397 7.9E-125 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 C3Y93_05050 963c0eb2a7294b2ce98a9ed67e342b64 759 Gene3D G3DSA:3.40.50.10380 1 161 1.0E-69 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 C3Y93_05050 963c0eb2a7294b2ce98a9ed67e342b64 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 426 748 4.8E-94 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 C3Y93_05050 963c0eb2a7294b2ce98a9ed67e342b64 759 Pfam PF03949 Malic enzyme, NAD binding domain 166 357 1.5E-21 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 C3Y93_05050 963c0eb2a7294b2ce98a9ed67e342b64 759 SUPERFAMILY SSF51735 164 448 9.64E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_05050 963c0eb2a7294b2ce98a9ed67e342b64 759 Gene3D G3DSA:3.40.50.720 162 441 7.7E-81 T 14-10-2018 C3Y93_05050 963c0eb2a7294b2ce98a9ed67e342b64 759 SUPERFAMILY SSF53659 426 751 2.38E-87 T 14-10-2018 C3Y93_05050 963c0eb2a7294b2ce98a9ed67e342b64 759 SMART SM01274 19 152 7.4E-81 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 C3Y93_05050 963c0eb2a7294b2ce98a9ed67e342b64 759 PIRSF PIRSF036684 1 756 0.0 T 14-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 C3Y93_05050 963c0eb2a7294b2ce98a9ed67e342b64 759 Pfam PF00390 Malic enzyme, N-terminal domain 115 152 2.2E-6 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 C3Y93_05050 963c0eb2a7294b2ce98a9ed67e342b64 759 Pfam PF00390 Malic enzyme, N-terminal domain 21 113 2.6E-20 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 C3Y93_05050 963c0eb2a7294b2ce98a9ed67e342b64 759 Gene3D G3DSA:3.40.50.10750 569 724 2.8E-93 T 14-10-2018 C3Y93_05050 963c0eb2a7294b2ce98a9ed67e342b64 759 SUPERFAMILY SSF53223 10 162 1.29E-52 T 14-10-2018 C3Y93_01400 19b440885b427d1de7938e83ebc4afd9 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 56.61 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 C3Y93_01400 19b440885b427d1de7938e83ebc4afd9 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 2.5E-222 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 C3Y93_01400 19b440885b427d1de7938e83ebc4afd9 490 SUPERFAMILY SSF53720 6 483 1.19E-169 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3Y93_01400 19b440885b427d1de7938e83ebc4afd9 490 Gene3D G3DSA:3.40.605.10 4 254 1.5E-104 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C3Y93_01400 19b440885b427d1de7938e83ebc4afd9 490 Pfam PF00171 Aldehyde dehydrogenase family 16 479 7.7E-175 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3Y93_01400 19b440885b427d1de7938e83ebc4afd9 490 Gene3D G3DSA:3.40.309.10 255 486 1.3E-77 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C3Y93_01400 19b440885b427d1de7938e83ebc4afd9 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 C3Y93_01400 19b440885b427d1de7938e83ebc4afd9 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 PRINTS PR00142 RecA protein signature 210 238 1.1E-82 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 PRINTS PR00142 RecA protein signature 165 194 1.1E-82 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 PRINTS PR00142 RecA protein signature 127 156 1.1E-82 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 PRINTS PR00142 RecA protein signature 243 272 1.1E-82 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 PRINTS PR00142 RecA protein signature 93 122 1.1E-82 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 PRINTS PR00142 RecA protein signature 297 314 1.1E-82 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 Pfam PF00154 recA bacterial DNA recombination protein 7 268 1.2E-148 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.7E-171 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 SUPERFAMILY SSF54752 269 324 2.35E-19 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 Gene3D G3DSA:3.30.250.10 269 327 2.8E-24 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 Gene3D G3DSA:3.40.50.300 26 267 1.5E-85 T 14-10-2018 C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 ProSitePatterns PS00321 recA signature. 213 221 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 SUPERFAMILY SSF52540 4 267 2.41E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 SMART SM00382 57 228 1.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_01980 adb26f50232e4e6111808626c2667e65 348 Hamap MF_00268 Protein RecA [recA]. 5 329 51.661 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 Gene3D G3DSA:3.30.230.10 491 695 1.4E-86 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 Gene3D G3DSA:3.30.70.240 613 684 1.4E-86 T 14-10-2018 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 Pfam PF03144 Elongation factor Tu domain 2 331 398 6.6E-15 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 SMART SM00838 609 697 1.4E-56 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 Pfam PF03764 Elongation factor G, domain IV 486 606 4.5E-41 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 SUPERFAMILY SSF54211 489 608 1.64E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 Gene3D G3DSA:3.40.50.300 1 299 1.2E-111 T 14-10-2018 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 SUPERFAMILY SSF54980 612 700 1.82E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 SUPERFAMILY SSF52540 6 287 3.3E-105 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 Gene3D G3DSA:2.40.30.10 300 412 2.2E-43 T 14-10-2018 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 Gene3D G3DSA:3.30.70.870 413 487 1.3E-32 T 14-10-2018 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 Pfam PF14492 Elongation Factor G, domain II 411 485 3.5E-34 T 14-10-2018 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 Pfam PF00679 Elongation factor G C-terminus 609 695 7.6E-31 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 SUPERFAMILY SSF54980 411 488 3.56E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 PRINTS PR00315 GTP-binding elongation factor signature 85 95 5.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 PRINTS PR00315 GTP-binding elongation factor signature 137 146 5.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 PRINTS PR00315 GTP-binding elongation factor signature 101 112 5.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 6.1E-27 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 Hamap MF_00054_B Elongation factor G [fusA]. 6 701 111.017 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 SUPERFAMILY SSF50447 271 411 5.3E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 SMART SM00889 487 607 7.7E-64 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 702 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3Y93_06320 a6dd1b38a419153db1e4fe16ef84b8fb 711 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 1.9E-64 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_04250 258924e6529e98b5677402149f1f1c04 231 SUPERFAMILY SSF46689 27 101 1.47E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_04250 258924e6529e98b5677402149f1f1c04 231 Gene3D G3DSA:1.10.357.10 78 230 6.3E-30 T 14-10-2018 C3Y93_04250 258924e6529e98b5677402149f1f1c04 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 42 87 6.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_04250 258924e6529e98b5677402149f1f1c04 231 Gene3D G3DSA:1.10.10.60 24 77 5.4E-17 T 14-10-2018 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 Pfam PF13533 Biotin-lipoyl like 61 97 9.9E-10 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 Gene3D G3DSA:2.40.50.100 59 92 6.1E-9 T 14-10-2018 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 Gene3D G3DSA:2.40.30.170 274 370 1.6E-15 T 14-10-2018 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 SUPERFAMILY SSF111369 62 153 3.4E-6 T 14-10-2018 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 ProSitePatterns PS00543 HlyD family secretion proteins signature. 358 380 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 184 393 6.8E-64 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 Pfam PF13437 HlyD family secretion protein 243 355 1.9E-17 T 14-10-2018 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 Gene3D G3DSA:1.10.287.470 93 122 6.1E-9 T 14-10-2018 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 Gene3D G3DSA:1.10.287.470 153 231 1.6E-15 T 14-10-2018 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 255 276 5.0E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 312 335 5.0E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 29 52 5.0E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 358 373 5.0E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 288 312 5.0E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 373 393 5.0E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 71 91 5.0E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 C3Y93_01245 0977b81f89ad470220232d90d92072e9 393 Gene3D G3DSA:2.40.50.100 232 273 1.6E-15 T 14-10-2018 C3Y93_03775 0b51706366e5370a556134b61ca12844 334 Pfam PF00296 Luciferase-like monooxygenase 22 298 1.0E-40 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 C3Y93_03775 0b51706366e5370a556134b61ca12844 334 Gene3D G3DSA:3.20.20.30 4 332 5.3E-96 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 C3Y93_03775 0b51706366e5370a556134b61ca12844 334 SUPERFAMILY SSF51679 8 329 1.06E-86 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 C3Y93_03775 0b51706366e5370a556134b61ca12844 334 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 10 329 2.4E-128 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 C3Y93_02700 46a9457ed2ea7feb1e79e51587aef856 401 Pfam PF02803 Thiolase, C-terminal domain 276 400 5.3E-48 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 C3Y93_02700 46a9457ed2ea7feb1e79e51587aef856 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 1.2E-142 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3Y93_02700 46a9457ed2ea7feb1e79e51587aef856 401 Gene3D G3DSA:3.40.47.10 6 282 3.0E-160 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_02700 46a9457ed2ea7feb1e79e51587aef856 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 C3Y93_02700 46a9457ed2ea7feb1e79e51587aef856 401 SUPERFAMILY SSF53901 3 276 7.77E-84 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_02700 46a9457ed2ea7feb1e79e51587aef856 401 Gene3D G3DSA:3.40.47.10 141 398 3.0E-160 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_02700 46a9457ed2ea7feb1e79e51587aef856 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 401 2.7E-226 T 14-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 C3Y93_02700 46a9457ed2ea7feb1e79e51587aef856 401 PIRSF PIRSF000429 1 401 4.8E-136 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3Y93_02700 46a9457ed2ea7feb1e79e51587aef856 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 C3Y93_02700 46a9457ed2ea7feb1e79e51587aef856 401 Pfam PF00108 Thiolase, N-terminal domain 5 269 5.2E-80 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 C3Y93_02700 46a9457ed2ea7feb1e79e51587aef856 401 SUPERFAMILY SSF53901 277 400 1.12E-45 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_02700 46a9457ed2ea7feb1e79e51587aef856 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 C3Y93_12490 7adf33baafe99522ae9e7e151a8ab92c 270 SMART SM00650 30 202 6.5E-82 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 C3Y93_12490 7adf33baafe99522ae9e7e151a8ab92c 270 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 14 269 57.975 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 C3Y93_12490 7adf33baafe99522ae9e7e151a8ab92c 270 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 46 73 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 C3Y93_12490 7adf33baafe99522ae9e7e151a8ab92c 270 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 15 267 7.6E-86 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 C3Y93_12490 7adf33baafe99522ae9e7e151a8ab92c 270 Gene3D G3DSA:3.40.50.150 8 203 1.1E-67 T 14-10-2018 C3Y93_12490 7adf33baafe99522ae9e7e151a8ab92c 270 Pfam PF00398 Ribosomal RNA adenine dimethylase 14 265 5.5E-65 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm C3Y93_12490 7adf33baafe99522ae9e7e151a8ab92c 270 Gene3D G3DSA:1.10.8.100 208 270 1.1E-21 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 C3Y93_12490 7adf33baafe99522ae9e7e151a8ab92c 270 SUPERFAMILY SSF53335 10 268 1.74E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 Gene3D G3DSA:3.30.70.1430 54 834 4.9E-291 T 14-10-2018 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 Pfam PF00873 AcrB/AcrD/AcrF family 17 1039 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 Gene3D G3DSA:3.30.2090.10 201 292 4.9E-291 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 Gene3D G3DSA:3.30.70.1440 685 884 4.9E-291 T 14-10-2018 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 Gene3D G3DSA:3.30.70.1430 582 684 4.9E-291 T 14-10-2018 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 SUPERFAMILY SSF82866 311 519 6.02E-37 T 14-10-2018 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 SUPERFAMILY SSF82693 54 140 2.09E-23 T 14-10-2018 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 SUPERFAMILY SSF82693 582 678 2.62E-5 T 14-10-2018 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 Gene3D G3DSA:1.20.1640.10 25 527 4.9E-291 T 14-10-2018 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 351 374 1.4E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 378 399 1.4E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 492 515 1.4E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 565 582 1.4E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 1.4E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 1.4E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 SUPERFAMILY SSF82866 821 1043 3.01E-52 T 14-10-2018 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 13 1045 0.0 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 Gene3D G3DSA:3.30.2090.10 739 826 4.9E-291 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 Gene3D G3DSA:3.30.70.1320 148 345 4.9E-291 T 14-10-2018 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 SUPERFAMILY SSF82714 205 286 8.37E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 SUPERFAMILY SSF82714 738 820 3.53E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 SUPERFAMILY SSF82693 166 345 9.77E-22 T 14-10-2018 C3Y93_01390 7cb46d63396890c942190c7c09908ed0 1048 Gene3D G3DSA:1.20.1640.10 528 1037 4.9E-291 T 14-10-2018 C3Y93_01905 044ae7ddd6ef36a1d0f482c74c6592ba 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 10 238 36.193 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 C3Y93_01905 044ae7ddd6ef36a1d0f482c74c6592ba 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 10 237 4.3E-84 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 C3Y93_01905 044ae7ddd6ef36a1d0f482c74c6592ba 250 Gene3D G3DSA:3.40.1180.10 1 238 7.2E-88 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 C3Y93_01905 044ae7ddd6ef36a1d0f482c74c6592ba 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 17 237 8.9E-74 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 C3Y93_01905 044ae7ddd6ef36a1d0f482c74c6592ba 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 183 200 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 C3Y93_01905 044ae7ddd6ef36a1d0f482c74c6592ba 250 SUPERFAMILY SSF64005 9 233 1.83E-80 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 C3Y93_12665 4f79b4d2248fcf0552c6e13792826520 268 Gene3D G3DSA:1.25.40.10 25 268 8.4E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_12665 4f79b4d2248fcf0552c6e13792826520 268 SMART SM00671 57 92 3.6E-8 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_12665 4f79b4d2248fcf0552c6e13792826520 268 SMART SM00671 93 129 0.0075 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_12665 4f79b4d2248fcf0552c6e13792826520 268 SMART SM00671 204 239 11.0 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_12665 4f79b4d2248fcf0552c6e13792826520 268 SUPERFAMILY SSF81901 150 259 2.35E-7 T 14-10-2018 C3Y93_12665 4f79b4d2248fcf0552c6e13792826520 268 SUPERFAMILY SSF81901 35 185 1.44E-20 T 14-10-2018 C3Y93_12665 4f79b4d2248fcf0552c6e13792826520 268 Pfam PF08238 Sel1 repeat 57 92 4.1E-8 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_12665 4f79b4d2248fcf0552c6e13792826520 268 Pfam PF08238 Sel1 repeat 94 128 0.0012 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_12665 4f79b4d2248fcf0552c6e13792826520 268 Pfam PF08238 Sel1 repeat 206 230 160.0 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_00120 f9138777d6f21da38ab87d4e7af1f180 190 Gene3D G3DSA:3.40.50.620 1 187 1.2E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_00120 f9138777d6f21da38ab87d4e7af1f180 190 Pfam PF01467 Cytidylyltransferase-like 9 61 2.9E-6 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C3Y93_00120 f9138777d6f21da38ab87d4e7af1f180 190 SUPERFAMILY SSF52374 9 174 9.92E-23 T 14-10-2018 C3Y93_00120 f9138777d6f21da38ab87d4e7af1f180 190 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 66 4.4E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 Gene3D G3DSA:1.10.274.10 201 325 4.4E-59 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 SUPERFAMILY SSF55781 4 162 1.98E-32 T 14-10-2018 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 625 643 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 Pfam PF05524 PEP-utilising enzyme, N-terminal 183 305 2.7E-24 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 Pfam PF13185 GAF domain 20 158 9.3E-16 T 14-10-2018 IPR003018 GAF domain GO:0005515 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 SUPERFAMILY SSF47831 209 320 4.84E-26 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 SUPERFAMILY SSF52009 304 424 2.22E-26 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 431 718 4.5E-96 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 184 743 5.1E-129 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 Gene3D G3DSA:3.20.20.60 412 752 4.7E-107 T 14-10-2018 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 Gene3D G3DSA:3.50.30.10 184 411 4.4E-59 T 14-10-2018 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 SMART SM00065 21 168 2.0E-22 T 14-10-2018 IPR003018 GAF domain GO:0005515 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 SUPERFAMILY SSF51621 432 726 1.96E-98 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 490 3.0E-23 T 14-10-2018 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 625 640 3.0E-23 T 14-10-2018 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 642 657 3.0E-23 T 14-10-2018 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 678 690 3.0E-23 T 14-10-2018 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 Pfam PF00391 PEP-utilising enzyme, mobile domain 331 403 5.2E-17 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 C3Y93_11865 f20336f7a26a929be8470a0c4716c676 765 Gene3D G3DSA:3.30.450.40 2 168 2.0E-47 T 14-10-2018 IPR029016 GAF-like domain superfamily C3Y93_07345 c4593d8c3a9768df21fdbb91e10a4b5a 688 SMART SM00267 251 422 3.1E-52 T 14-10-2018 IPR000160 GGDEF domain C3Y93_07345 c4593d8c3a9768df21fdbb91e10a4b5a 688 Pfam PF00563 EAL domain 439 674 9.0E-67 T 14-10-2018 IPR001633 EAL domain C3Y93_07345 c4593d8c3a9768df21fdbb91e10a4b5a 688 Pfam PF03707 Bacterial signalling protein N terminal repeat 185 240 3.9E-6 T 14-10-2018 IPR005330 MHYT domain C3Y93_07345 c4593d8c3a9768df21fdbb91e10a4b5a 688 Pfam PF03707 Bacterial signalling protein N terminal repeat 53 109 4.3E-16 T 14-10-2018 IPR005330 MHYT domain C3Y93_07345 c4593d8c3a9768df21fdbb91e10a4b5a 688 Pfam PF03707 Bacterial signalling protein N terminal repeat 116 166 5.8E-16 T 14-10-2018 IPR005330 MHYT domain C3Y93_07345 c4593d8c3a9768df21fdbb91e10a4b5a 688 SUPERFAMILY SSF141868 439 685 2.48E-83 T 14-10-2018 IPR035919 EAL domain superfamily C3Y93_07345 c4593d8c3a9768df21fdbb91e10a4b5a 688 Gene3D G3DSA:3.20.20.450 436 687 1.5E-91 T 14-10-2018 IPR035919 EAL domain superfamily C3Y93_07345 c4593d8c3a9768df21fdbb91e10a4b5a 688 Gene3D G3DSA:3.30.70.270 256 435 2.1E-50 T 14-10-2018 C3Y93_07345 c4593d8c3a9768df21fdbb91e10a4b5a 688 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 418 2.6E-40 T 14-10-2018 IPR000160 GGDEF domain C3Y93_07345 c4593d8c3a9768df21fdbb91e10a4b5a 688 SMART SM00052 433 679 1.8E-103 T 14-10-2018 IPR001633 EAL domain C3Y93_07345 c4593d8c3a9768df21fdbb91e10a4b5a 688 SUPERFAMILY SSF55073 267 423 4.39E-45 T 14-10-2018 IPR029787 Nucleotide cyclase C3Y93_07345 c4593d8c3a9768df21fdbb91e10a4b5a 688 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 421 1.0E-37 T 14-10-2018 IPR000160 GGDEF domain C3Y93_08840 0ad18f319bdcf2e4d36e04e2042245d4 234 SUPERFAMILY SSF53098 72 191 3.19E-7 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_08840 0ad18f319bdcf2e4d36e04e2042245d4 234 Pfam PF13610 DDE domain 74 212 9.7E-49 T 14-10-2018 IPR032874 DDE domain C3Y93_04265 dfc8b63c4b5646dc6176fc6a042bbb16 214 Gene3D G3DSA:3.30.2350.10 5 213 4.8E-66 T 14-10-2018 C3Y93_04265 dfc8b63c4b5646dc6176fc6a042bbb16 214 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 53 67 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_04265 dfc8b63c4b5646dc6176fc6a042bbb16 214 Pfam PF00849 RNA pseudouridylate synthase 16 164 4.1E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_04265 dfc8b63c4b5646dc6176fc6a042bbb16 214 SUPERFAMILY SSF55120 6 213 4.48E-60 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_08150 f368a3c1ce36ed32cc59b8599e168098 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 5.3E-72 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 C3Y93_08150 f368a3c1ce36ed32cc59b8599e168098 207 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 34.911 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 C3Y93_08150 f368a3c1ce36ed32cc59b8599e168098 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 C3Y93_08150 f368a3c1ce36ed32cc59b8599e168098 207 Gene3D G3DSA:3.30.63.10 34 93 4.6E-64 T 14-10-2018 C3Y93_08150 f368a3c1ce36ed32cc59b8599e168098 207 SUPERFAMILY SSF52540 2 184 1.53E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_08150 f368a3c1ce36ed32cc59b8599e168098 207 Pfam PF00625 Guanylate kinase 6 182 1.7E-48 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit C3Y93_08150 f368a3c1ce36ed32cc59b8599e168098 207 SMART SM00072 2 184 2.1E-60 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit C3Y93_08150 f368a3c1ce36ed32cc59b8599e168098 207 Gene3D G3DSA:3.40.50.300 7 180 4.6E-64 T 14-10-2018 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 Gene3D G3DSA:3.90.740.10 204 421 2.4E-233 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 SUPERFAMILY SSF50677 213 416 7.33E-51 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 11 938 21.067 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 24 853 1.5E-278 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 SUPERFAMILY SSF47323 665 934 2.06E-72 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 36 650 2.3E-205 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 Gene3D G3DSA:1.10.730.20 653 937 5.4E-89 T 14-10-2018 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 67 78 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 SUPERFAMILY SSF52374 11 660 7.17E-137 T 14-10-2018 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 Pfam PF08264 Anticodon-binding domain of tRNA 698 853 9.5E-28 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 Pfam PF06827 Zinc finger found in FPG and IleRS 907 934 3.2E-7 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 574 583 3.9E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 60 71 3.9E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 540 553 3.9E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 414 429 3.9E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 246 269 3.9E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C3Y93_09665 7f8ae31640b1d76fc54ad8b47cd78f4e 948 Gene3D G3DSA:3.40.50.620 34 642 2.4E-233 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_12570 e8524fededc4ac29bc8b8fdd15211854 711 SUPERFAMILY SSF48179 619 707 6.29E-18 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3Y93_12570 e8524fededc4ac29bc8b8fdd15211854 711 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 200 6.9E-34 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3Y93_12570 e8524fededc4ac29bc8b8fdd15211854 711 SUPERFAMILY SSF51735 314 494 2.48E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_12570 e8524fededc4ac29bc8b8fdd15211854 711 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 1.1E-58 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3Y93_12570 e8524fededc4ac29bc8b8fdd15211854 711 SUPERFAMILY SSF48179 496 632 4.68E-19 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3Y93_12570 e8524fededc4ac29bc8b8fdd15211854 711 Gene3D G3DSA:3.40.50.720 314 497 2.6E-64 T 14-10-2018 C3Y93_12570 e8524fededc4ac29bc8b8fdd15211854 711 Gene3D G3DSA:3.90.226.10 1 312 1.1E-96 T 14-10-2018 C3Y93_12570 e8524fededc4ac29bc8b8fdd15211854 711 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 597 4.7E-17 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3Y93_12570 e8524fededc4ac29bc8b8fdd15211854 711 SUPERFAMILY SSF52096 2 295 1.77E-62 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_12570 e8524fededc4ac29bc8b8fdd15211854 711 Gene3D G3DSA:1.10.1040.50 498 701 1.2E-57 T 14-10-2018 C3Y93_03920 18dce89679aee6e0a0a36d16bf469082 524 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 524 45.461 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3Y93_03920 18dce89679aee6e0a0a36d16bf469082 524 PIRSF PIRSF000414 1 524 3.8E-221 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3Y93_03920 18dce89679aee6e0a0a36d16bf469082 524 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4 524 2.4E-237 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3Y93_03920 18dce89679aee6e0a0a36d16bf469082 524 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 455 1.2E-117 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3Y93_03920 18dce89679aee6e0a0a36d16bf469082 524 Pfam PF02142 MGS-like domain 15 128 2.1E-30 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain C3Y93_03920 18dce89679aee6e0a0a36d16bf469082 524 SUPERFAMILY SSF53927 212 524 5.52E-129 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 C3Y93_03920 18dce89679aee6e0a0a36d16bf469082 524 SMART SM00851 15 128 2.0E-61 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain C3Y93_03920 18dce89679aee6e0a0a36d16bf469082 524 Gene3D G3DSA:3.40.140.20 209 365 3.4E-55 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3Y93_03920 18dce89679aee6e0a0a36d16bf469082 524 SUPERFAMILY SSF52335 3 192 1.57E-71 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily C3Y93_03920 18dce89679aee6e0a0a36d16bf469082 524 Gene3D G3DSA:3.40.50.1380 1 196 1.7E-85 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily C3Y93_03920 18dce89679aee6e0a0a36d16bf469082 524 Gene3D G3DSA:3.40.140.20 387 524 3.7E-61 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3Y93_03920 18dce89679aee6e0a0a36d16bf469082 524 SMART SM00798 133 456 5.0E-211 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3Y93_01565 f13fcab3ed3a13717e0246b2959d2e2f 327 Pfam PF00520 Ion transport protein 28 247 1.2E-28 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 C3Y93_01565 f13fcab3ed3a13717e0246b2959d2e2f 327 SUPERFAMILY SSF81324 25 246 8.9E-48 T 14-10-2018 C3Y93_01565 f13fcab3ed3a13717e0246b2959d2e2f 327 Gene3D G3DSA:1.10.287.70 27 249 2.0E-56 T 14-10-2018 C3Y93_01565 f13fcab3ed3a13717e0246b2959d2e2f 327 PRINTS PR00169 Potassium channel signature 219 245 2.1E-30 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 C3Y93_01565 f13fcab3ed3a13717e0246b2959d2e2f 327 PRINTS PR00169 Potassium channel signature 190 212 2.1E-30 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 C3Y93_01565 f13fcab3ed3a13717e0246b2959d2e2f 327 PRINTS PR00169 Potassium channel signature 63 86 2.1E-30 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 C3Y93_01565 f13fcab3ed3a13717e0246b2959d2e2f 327 PRINTS PR00169 Potassium channel signature 159 182 2.1E-30 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 C3Y93_01565 f13fcab3ed3a13717e0246b2959d2e2f 327 PRINTS PR00169 Potassium channel signature 130 156 2.1E-30 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 C3Y93_07955 22cbc46c7747cc329dee899d1939ce90 384 Pfam PF06969 HemN C-terminal domain 312 372 1.3E-8 T 14-10-2018 IPR010723 HemN, C-terminal C3Y93_07955 22cbc46c7747cc329dee899d1939ce90 384 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 11 361 1.9E-109 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 C3Y93_07955 22cbc46c7747cc329dee899d1939ce90 384 Pfam PF04055 Radical SAM superfamily 15 185 2.2E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3Y93_07955 22cbc46c7747cc329dee899d1939ce90 384 Gene3D G3DSA:3.80.30.20 4 310 1.6E-91 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C3Y93_07955 22cbc46c7747cc329dee899d1939ce90 384 SMART SM00729 10 230 1.8E-51 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3Y93_07955 22cbc46c7747cc329dee899d1939ce90 384 SUPERFAMILY SSF102114 10 384 9.29E-98 T 14-10-2018 C3Y93_05235 c1a001a5b582f46e1b63e60fb3c52113 142 SUPERFAMILY SSF52980 9 108 1.43E-17 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C3Y93_05235 c1a001a5b582f46e1b63e60fb3c52113 142 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 8 133 3.2E-26 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 C3Y93_05235 c1a001a5b582f46e1b63e60fb3c52113 142 Pfam PF02021 Uncharacterised protein family UPF0102 14 104 9.4E-24 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 C3Y93_05235 c1a001a5b582f46e1b63e60fb3c52113 142 Gene3D G3DSA:3.40.1350.10 13 135 5.2E-28 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 C3Y93_05235 c1a001a5b582f46e1b63e60fb3c52113 142 Hamap MF_00048 UPF0102 protein YraN [yraN]. 7 118 19.373 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 C3Y93_08315 e2cf229cfc60cd2929680bd02c2d207a 497 Pfam PF08245 Mur ligase middle domain 108 312 1.2E-51 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C3Y93_08315 e2cf229cfc60cd2929680bd02c2d207a 497 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 484 4.4E-141 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 C3Y93_08315 e2cf229cfc60cd2929680bd02c2d207a 497 Gene3D G3DSA:3.40.1390.10 6 95 1.5E-8 T 14-10-2018 C3Y93_08315 e2cf229cfc60cd2929680bd02c2d207a 497 SUPERFAMILY SSF63418 17 94 4.97E-9 T 14-10-2018 IPR035911 MurE/MurF, N-terminal C3Y93_08315 e2cf229cfc60cd2929680bd02c2d207a 497 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 414 1.1E-18 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C3Y93_08315 e2cf229cfc60cd2929680bd02c2d207a 497 Gene3D G3DSA:3.40.1190.10 101 336 5.4E-72 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3Y93_08315 e2cf229cfc60cd2929680bd02c2d207a 497 SUPERFAMILY SSF53623 103 331 9.81E-69 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3Y93_08315 e2cf229cfc60cd2929680bd02c2d207a 497 Gene3D G3DSA:3.90.190.20 340 492 1.5E-55 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3Y93_08315 e2cf229cfc60cd2929680bd02c2d207a 497 SUPERFAMILY SSF53244 333 484 1.31E-46 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3Y93_08315 e2cf229cfc60cd2929680bd02c2d207a 497 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 484 30.765 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 C3Y93_14205 f19849acfe63e7b0016522ddd5337493 395 SUPERFAMILY SSF116734 216 394 8.83E-35 T 14-10-2018 C3Y93_14205 f19849acfe63e7b0016522ddd5337493 395 SUPERFAMILY SSF116734 4 208 2.29E-39 T 14-10-2018 C3Y93_14205 f19849acfe63e7b0016522ddd5337493 395 Gene3D G3DSA:3.90.220.20 11 157 5.0E-75 T 14-10-2018 C3Y93_14205 f19849acfe63e7b0016522ddd5337493 395 Gene3D G3DSA:3.90.220.20 218 352 5.0E-75 T 14-10-2018 C3Y93_14205 f19849acfe63e7b0016522ddd5337493 395 Gene3D G3DSA:1.10.287.1120 158 393 5.0E-75 T 14-10-2018 C3Y93_14205 f19849acfe63e7b0016522ddd5337493 395 Pfam PF01420 Type I restriction modification DNA specificity domain 216 381 9.1E-17 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 C3Y93_14205 f19849acfe63e7b0016522ddd5337493 395 Pfam PF01420 Type I restriction modification DNA specificity domain 13 181 3.5E-18 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 C3Y93_11050 61beb5d1b5c7a4ef1496c9100539382f 279 Pfam PF11356 Type II secretion system protein C 26 140 1.2E-17 T 14-10-2018 IPR024961 Type II secretion system protein C, N-terminal C3Y93_11050 61beb5d1b5c7a4ef1496c9100539382f 279 Pfam PF13180 PDZ domain 213 275 3.5E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3Y93_11050 61beb5d1b5c7a4ef1496c9100539382f 279 Gene3D G3DSA:2.30.42.10 181 277 2.6E-13 T 14-10-2018 C3Y93_11050 61beb5d1b5c7a4ef1496c9100539382f 279 Gene3D G3DSA:2.30.30.830 83 148 9.7E-11 T 14-10-2018 C3Y93_11050 61beb5d1b5c7a4ef1496c9100539382f 279 SUPERFAMILY SSF50156 186 276 1.97E-13 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 SUPERFAMILY SSF47781 461 548 4.56E-26 T 14-10-2018 IPR010994 RuvA domain 2-like C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 Gene3D G3DSA:1.10.150.310 490 621 2.0E-48 T 14-10-2018 C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 Gene3D G3DSA:1.10.3500.10 112 489 1.4E-133 T 14-10-2018 IPR023323 Tex-like domain superfamily C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 SUPERFAMILY SSF47781 552 623 4.22E-19 T 14-10-2018 IPR010994 RuvA domain 2-like C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 SUPERFAMILY SSF50249 628 713 7.08E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 Pfam PF16921 Tex protein YqgF-like domain 317 442 2.8E-49 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 Pfam PF00575 S1 RNA binding domain 640 711 1.5E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 Gene3D G3DSA:3.30.420.140 315 442 1.4E-133 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 SMART SM00316 640 711 1.5E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 Pfam PF12836 Helix-hairpin-helix motif 482 546 1.9E-25 T 14-10-2018 C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 Gene3D G3DSA:2.40.50.140 622 714 2.6E-29 T 14-10-2018 C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 SUPERFAMILY SSF53098 312 460 1.52E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 Gene3D G3DSA:1.10.10.650 1 108 2.4E-36 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 SUPERFAMILY SSF158832 1 311 4.58E-88 T 14-10-2018 C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 SMART SM00732 316 415 7.3E-31 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 C3Y93_08390 c1cda51830cce7fbe0578962fe4e3a29 783 Pfam PF09371 Tex-like protein N-terminal domain 8 187 1.1E-54 T 14-10-2018 IPR018974 Tex-like protein, N-terminal C3Y93_04425 4dc00a90802dc7dae592e5f458a902e9 220 SUPERFAMILY SSF52172 1 179 5.86E-39 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_04425 4dc00a90802dc7dae592e5f458a902e9 220 Gene3D G3DSA:3.40.50.2300 1 121 1.8E-35 T 14-10-2018 C3Y93_04425 4dc00a90802dc7dae592e5f458a902e9 220 Gene3D G3DSA:1.10.10.10 122 220 4.7E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_04425 4dc00a90802dc7dae592e5f458a902e9 220 Pfam PF00072 Response regulator receiver domain 4 112 3.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_04425 4dc00a90802dc7dae592e5f458a902e9 220 SMART SM00862 145 216 1.2E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_04425 4dc00a90802dc7dae592e5f458a902e9 220 SMART SM00448 1 112 1.7E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_04425 4dc00a90802dc7dae592e5f458a902e9 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 2.0E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 Pfam PF00873 AcrB/AcrD/AcrF family 7 1032 3.2E-168 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 Gene3D G3DSA:3.30.2090.10 731 819 1.1E-256 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 SUPERFAMILY SSF82866 302 486 2.75E-37 T 14-10-2018 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 SUPERFAMILY SSF82693 581 666 3.92E-5 T 14-10-2018 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 Gene3D G3DSA:3.30.70.1430 42 827 1.1E-256 T 14-10-2018 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 SUPERFAMILY SSF82714 733 818 5.49E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 SUPERFAMILY SSF82866 815 1040 2.35E-46 T 14-10-2018 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 SUPERFAMILY SSF82693 139 325 2.51E-17 T 14-10-2018 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 SUPERFAMILY SSF82693 42 138 4.01E-19 T 14-10-2018 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 Gene3D G3DSA:3.30.70.1440 680 879 1.1E-256 T 14-10-2018 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 Gene3D G3DSA:1.20.1640.10 527 1031 1.1E-256 T 14-10-2018 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 SUPERFAMILY SSF82714 187 266 3.01E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 Gene3D G3DSA:3.30.70.1320 138 328 1.1E-256 T 14-10-2018 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 Gene3D G3DSA:3.30.2090.10 181 270 1.1E-256 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 Gene3D G3DSA:1.20.1640.10 13 506 1.1E-256 T 14-10-2018 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 8.8E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 8.8E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 8.8E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 8.8E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 8.8E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_10040 93f6a6743623ee7bad7ec383241e62df 1044 Gene3D G3DSA:3.30.70.1430 581 679 1.1E-256 T 14-10-2018 C3Y93_06330 0d15f5dd20f577926cd1a507a3336ced 124 SUPERFAMILY SSF50249 3 123 9.42E-51 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_06330 0d15f5dd20f577926cd1a507a3336ced 124 PIRSF PIRSF002133 1 124 6.9E-53 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_06330 0d15f5dd20f577926cd1a507a3336ced 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.302 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_06330 0d15f5dd20f577926cd1a507a3336ced 124 Gene3D G3DSA:2.40.50.140 1 124 3.5E-62 T 14-10-2018 C3Y93_06330 0d15f5dd20f577926cd1a507a3336ced 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.0E-68 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_06330 0d15f5dd20f577926cd1a507a3336ced 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_06330 0d15f5dd20f577926cd1a507a3336ced 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 3.3E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_06330 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.8E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_06330 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.8E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_06330 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.8E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_06330 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.8E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_06330 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.8E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_06330 0d15f5dd20f577926cd1a507a3336ced 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.8E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_09685 1cce50116bf15fb4e04f5a611738286e 452 SUPERFAMILY SSF103473 12 430 1.03E-82 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_09685 1cce50116bf15fb4e04f5a611738286e 452 Pfam PF07690 Major Facilitator Superfamily 29 336 1.1E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_09685 1cce50116bf15fb4e04f5a611738286e 452 Gene3D G3DSA:1.20.1250.20 21 430 3.4E-78 T 14-10-2018 C3Y93_09685 1cce50116bf15fb4e04f5a611738286e 452 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C3Y93_12030 7a563d03bebfe9e78e1a288fb79df246 51 Pfam PF00471 Ribosomal protein L33 4 49 3.8E-18 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_12030 7a563d03bebfe9e78e1a288fb79df246 51 Gene3D G3DSA:2.20.28.120 1 51 2.4E-28 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_12030 7a563d03bebfe9e78e1a288fb79df246 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.385 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_12030 7a563d03bebfe9e78e1a288fb79df246 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_12030 7a563d03bebfe9e78e1a288fb79df246 51 SUPERFAMILY SSF57829 1 49 7.94E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 C3Y93_12030 7a563d03bebfe9e78e1a288fb79df246 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 1.1E-24 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07450 8ff4c2cbed6b3d68af8d623ca44a7dc7 201 SUPERFAMILY SSF52096 18 199 9.49E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_07450 8ff4c2cbed6b3d68af8d623ca44a7dc7 201 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 199 2.0E-106 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C3Y93_07450 8ff4c2cbed6b3d68af8d623ca44a7dc7 201 Gene3D G3DSA:3.90.226.10 3 201 7.7E-84 T 14-10-2018 C3Y93_07450 8ff4c2cbed6b3d68af8d623ca44a7dc7 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 44.167 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C3Y93_07450 8ff4c2cbed6b3d68af8d623ca44a7dc7 201 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 14-10-2018 IPR033135 ClpP, histidine active site C3Y93_07450 8ff4c2cbed6b3d68af8d623ca44a7dc7 201 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 6.6E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C3Y93_07450 8ff4c2cbed6b3d68af8d623ca44a7dc7 201 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 6.6E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C3Y93_07450 8ff4c2cbed6b3d68af8d623ca44a7dc7 201 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 6.6E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C3Y93_07450 8ff4c2cbed6b3d68af8d623ca44a7dc7 201 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 6.6E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C3Y93_07450 8ff4c2cbed6b3d68af8d623ca44a7dc7 201 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 6.6E-52 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C3Y93_07450 8ff4c2cbed6b3d68af8d623ca44a7dc7 201 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 14-10-2018 IPR018215 ClpP, Ser active site C3Y93_07450 8ff4c2cbed6b3d68af8d623ca44a7dc7 201 Pfam PF00574 Clp protease 20 199 1.1E-88 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA C3Y93_11925 cd158d07f47412db7381549674ec1a9b 335 SMART SM00342 248 330 3.3E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_11925 cd158d07f47412db7381549674ec1a9b 335 Gene3D G3DSA:1.10.10.60 228 335 9.6E-26 T 14-10-2018 C3Y93_11925 cd158d07f47412db7381549674ec1a9b 335 SUPERFAMILY SSF46689 283 332 5.82E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_11925 cd158d07f47412db7381549674ec1a9b 335 Pfam PF12833 Helix-turn-helix domain 254 332 5.2E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_11925 cd158d07f47412db7381549674ec1a9b 335 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 205 1.9E-35 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal C3Y93_09425 6b0ca1fe9a39f2e9e8cc4a46798a778e 236 Gene3D G3DSA:3.40.50.2300 2 131 2.6E-37 T 14-10-2018 C3Y93_09425 6b0ca1fe9a39f2e9e8cc4a46798a778e 236 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 228 2.7E-101 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 C3Y93_09425 6b0ca1fe9a39f2e9e8cc4a46798a778e 236 SMART SM00448 4 118 4.0E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_09425 6b0ca1fe9a39f2e9e8cc4a46798a778e 236 Gene3D G3DSA:1.10.10.10 132 231 3.6E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_09425 6b0ca1fe9a39f2e9e8cc4a46798a778e 236 SMART SM00862 152 227 2.9E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_09425 6b0ca1fe9a39f2e9e8cc4a46798a778e 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 1.3E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_09425 6b0ca1fe9a39f2e9e8cc4a46798a778e 236 SUPERFAMILY SSF46894 130 228 2.81E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3Y93_09425 6b0ca1fe9a39f2e9e8cc4a46798a778e 236 Pfam PF00072 Response regulator receiver domain 6 119 6.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_09425 6b0ca1fe9a39f2e9e8cc4a46798a778e 236 SUPERFAMILY SSF52172 5 130 7.12E-41 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_06625 72264906db5e87eb27effbad6f0c413f 448 Pfam PF01171 PP-loop family 32 204 4.9E-50 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 C3Y93_06625 72264906db5e87eb27effbad6f0c413f 448 SMART SM00977 372 442 9.9E-7 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C3Y93_06625 72264906db5e87eb27effbad6f0c413f 448 Gene3D G3DSA:3.40.50.620 19 238 4.2E-64 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_06625 72264906db5e87eb27effbad6f0c413f 448 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 372 415 3.6E-14 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C3Y93_06625 72264906db5e87eb27effbad6f0c413f 448 Pfam PF09179 TilS substrate binding domain 252 318 5.2E-8 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C3Y93_06625 72264906db5e87eb27effbad6f0c413f 448 SUPERFAMILY SSF56037 336 442 4.45E-15 T 14-10-2018 C3Y93_06625 72264906db5e87eb27effbad6f0c413f 448 Gene3D G3DSA:1.20.59.20 239 322 4.2E-15 T 14-10-2018 C3Y93_06625 72264906db5e87eb27effbad6f0c413f 448 SUPERFAMILY SSF52402 25 236 1.92E-50 T 14-10-2018 C3Y93_06625 72264906db5e87eb27effbad6f0c413f 448 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 32 208 6.0E-51 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C3Y93_06625 72264906db5e87eb27effbad6f0c413f 448 Pfam PF11734 TilS substrate C-terminal domain 372 421 4.4E-7 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C3Y93_06625 72264906db5e87eb27effbad6f0c413f 448 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 24 311 22.372 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C3Y93_06625 72264906db5e87eb27effbad6f0c413f 448 SUPERFAMILY SSF82829 241 323 1.96E-18 T 14-10-2018 C3Y93_05375 37f5c5e929316955e039949e50baadaa 524 SUPERFAMILY SSF55073 373 519 3.61E-42 T 14-10-2018 IPR029787 Nucleotide cyclase C3Y93_05375 37f5c5e929316955e039949e50baadaa 524 Pfam PF00990 Diguanylate cyclase, GGDEF domain 369 517 2.5E-42 T 14-10-2018 IPR000160 GGDEF domain C3Y93_05375 37f5c5e929316955e039949e50baadaa 524 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 365 520 1.4E-45 T 14-10-2018 IPR000160 GGDEF domain C3Y93_05375 37f5c5e929316955e039949e50baadaa 524 Gene3D G3DSA:3.30.70.270 362 523 4.4E-49 T 14-10-2018 C3Y93_05375 37f5c5e929316955e039949e50baadaa 524 SUPERFAMILY SSF103190 188 264 1.57E-6 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily C3Y93_05375 37f5c5e929316955e039949e50baadaa 524 Pfam PF02743 Cache domain 52 270 3.9E-19 T 14-10-2018 IPR033479 Double Cache domain 1 C3Y93_05375 37f5c5e929316955e039949e50baadaa 524 Gene3D G3DSA:3.30.450.20 155 284 3.3E-14 T 14-10-2018 C3Y93_05375 37f5c5e929316955e039949e50baadaa 524 SMART SM00267 357 522 1.6E-54 T 14-10-2018 IPR000160 GGDEF domain C3Y93_06190 26a75ba43eecca721255818d689839ad 372 Gene3D G3DSA:3.40.50.300 102 356 4.0E-87 T 14-10-2018 C3Y93_06190 26a75ba43eecca721255818d689839ad 372 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 345 4.4E-131 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 C3Y93_06190 26a75ba43eecca721255818d689839ad 372 SMART SM00382 123 248 2.5E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_06190 26a75ba43eecca721255818d689839ad 372 Pfam PF00437 Type II/IV secretion system protein 10 270 2.5E-37 T 14-10-2018 IPR001482 Type II/IV secretion system protein C3Y93_06190 26a75ba43eecca721255818d689839ad 372 Gene3D G3DSA:3.30.450.90 1 100 5.7E-27 T 14-10-2018 C3Y93_06190 26a75ba43eecca721255818d689839ad 372 SUPERFAMILY SSF52540 4 338 3.11E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_12415 0438b86c6b15e774309a6bbdce4c983e 411 SUPERFAMILY SSF55073 249 398 8.24E-36 T 14-10-2018 IPR029787 Nucleotide cyclase C3Y93_12415 0438b86c6b15e774309a6bbdce4c983e 411 SMART SM00267 233 400 6.7E-38 T 14-10-2018 IPR000160 GGDEF domain C3Y93_12415 0438b86c6b15e774309a6bbdce4c983e 411 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 240 394 1.4E-30 T 14-10-2018 IPR000160 GGDEF domain C3Y93_12415 0438b86c6b15e774309a6bbdce4c983e 411 Pfam PF00990 Diguanylate cyclase, GGDEF domain 245 394 4.5E-37 T 14-10-2018 IPR000160 GGDEF domain C3Y93_12415 0438b86c6b15e774309a6bbdce4c983e 411 Pfam PF17152 Periplasmic sensor domain 44 140 1.5E-11 T 14-10-2018 IPR033417 Periplasmic sensor domain CHASE8 C3Y93_12415 0438b86c6b15e774309a6bbdce4c983e 411 Gene3D G3DSA:3.30.70.270 238 404 1.1E-40 T 14-10-2018 C3Y93_06665 fea0e9a316e456d3b3dc4548061931f7 326 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 7 325 47.788 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 C3Y93_06665 fea0e9a316e456d3b3dc4548061931f7 326 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 325 2.3E-109 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 C3Y93_06665 fea0e9a316e456d3b3dc4548061931f7 326 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 18 86 8.0E-21 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 C3Y93_06665 fea0e9a316e456d3b3dc4548061931f7 326 SUPERFAMILY SSF46589 11 98 7.32E-20 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 C3Y93_06665 fea0e9a316e456d3b3dc4548061931f7 326 SUPERFAMILY SSF55681 91 325 1.83E-81 T 14-10-2018 C3Y93_06665 fea0e9a316e456d3b3dc4548061931f7 326 Pfam PF01409 tRNA synthetases class II core domain (F) 91 325 9.8E-105 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 C3Y93_06665 fea0e9a316e456d3b3dc4548061931f7 326 Gene3D G3DSA:3.30.930.10 6 326 1.4E-122 T 14-10-2018 C3Y93_00795 6a41fc5719169d0cbafffba088315fdb 70 PRINTS PR00050 Cold shock protein signature 7 22 6.9E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3Y93_00795 6a41fc5719169d0cbafffba088315fdb 70 PRINTS PR00050 Cold shock protein signature 27 36 6.9E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3Y93_00795 6a41fc5719169d0cbafffba088315fdb 70 PRINTS PR00050 Cold shock protein signature 42 60 6.9E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3Y93_00795 6a41fc5719169d0cbafffba088315fdb 70 SUPERFAMILY SSF50249 2 69 2.36E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_00795 6a41fc5719169d0cbafffba088315fdb 70 PIRSF PIRSF002599 1 70 1.9E-22 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 C3Y93_00795 6a41fc5719169d0cbafffba088315fdb 70 Gene3D G3DSA:2.40.50.140 1 70 1.9E-27 T 14-10-2018 C3Y93_00795 6a41fc5719169d0cbafffba088315fdb 70 SMART SM00357 6 69 3.0E-28 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 C3Y93_00795 6a41fc5719169d0cbafffba088315fdb 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 5.8E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3Y93_00795 6a41fc5719169d0cbafffba088315fdb 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 14-10-2018 IPR019844 Cold-shock conserved site C3Y93_00330 daff8c30ae36fa10b29ca6942aebb0ae 398 Gene3D G3DSA:1.20.1250.20 14 387 3.8E-37 T 14-10-2018 C3Y93_00330 daff8c30ae36fa10b29ca6942aebb0ae 398 Pfam PF07690 Major Facilitator Superfamily 25 357 2.8E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_00330 daff8c30ae36fa10b29ca6942aebb0ae 398 SUPERFAMILY SSF103473 11 387 2.88E-39 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_00365 b9a413d6082216b314bd9ca60e7380e0 340 Pfam PF12849 PBP superfamily domain 17 304 8.4E-42 T 14-10-2018 IPR024370 PBP domain C3Y93_00365 b9a413d6082216b314bd9ca60e7380e0 340 Gene3D G3DSA:3.40.190.10 26 305 4.0E-51 T 14-10-2018 C3Y93_00365 b9a413d6082216b314bd9ca60e7380e0 340 SUPERFAMILY SSF53850 25 334 2.39E-62 T 14-10-2018 C3Y93_00365 b9a413d6082216b314bd9ca60e7380e0 340 Gene3D G3DSA:3.40.190.10 112 278 4.0E-51 T 14-10-2018 C3Y93_02690 e9e9ddcc637840076bcb4f4b3d0bb268 228 SMART SM00882 6 219 9.0E-78 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 C3Y93_02690 e9e9ddcc637840076bcb4f4b3d0bb268 228 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 14-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 C3Y93_02690 e9e9ddcc637840076bcb4f4b3d0bb268 228 Gene3D G3DSA:3.40.1080.10 1 226 7.8E-76 T 14-10-2018 C3Y93_02690 e9e9ddcc637840076bcb4f4b3d0bb268 228 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 3.8E-118 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 C3Y93_02690 e9e9ddcc637840076bcb4f4b3d0bb268 228 Pfam PF01144 Coenzyme A transferase 8 218 4.7E-71 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 C3Y93_02690 e9e9ddcc637840076bcb4f4b3d0bb268 228 SUPERFAMILY SSF100950 2 220 2.23E-76 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C3Y93_00955 1084adcf900b6e6bdda23306ac0ea962 411 Gene3D G3DSA:3.40.640.10 61 302 2.0E-141 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_00955 1084adcf900b6e6bdda23306ac0ea962 411 Pfam PF00155 Aminotransferase class I and II 42 403 9.7E-48 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3Y93_00955 1084adcf900b6e6bdda23306ac0ea962 411 Gene3D G3DSA:3.90.1150.10 29 406 2.0E-141 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_00955 1084adcf900b6e6bdda23306ac0ea962 411 SUPERFAMILY SSF53383 11 409 1.33E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_12145 cc9a32f16f1eedc56eec530c439d89cc 328 PIRSF PIRSF000102 1 326 3.7E-64 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 C3Y93_12145 cc9a32f16f1eedc56eec530c439d89cc 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 57.0 T 14-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 C3Y93_12145 cc9a32f16f1eedc56eec530c439d89cc 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 2 321 3.7E-146 T 14-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 C3Y93_12145 cc9a32f16f1eedc56eec530c439d89cc 328 Gene3D G3DSA:3.40.50.720 1 156 1.0E-57 T 14-10-2018 C3Y93_12145 cc9a32f16f1eedc56eec530c439d89cc 328 Gene3D G3DSA:3.90.110.10 157 328 5.3E-63 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 C3Y93_12145 cc9a32f16f1eedc56eec530c439d89cc 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 154 1.1E-35 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 C3Y93_12145 cc9a32f16f1eedc56eec530c439d89cc 328 SUPERFAMILY SSF56327 159 327 1.17E-60 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 C3Y93_12145 cc9a32f16f1eedc56eec530c439d89cc 328 SUPERFAMILY SSF51735 3 157 8.62E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_12145 cc9a32f16f1eedc56eec530c439d89cc 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 321 3.2E-33 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 C3Y93_09065 9915491aeeba4ca9f527c41fc20b93ab 81 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 72 2.0E-14 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ C3Y93_09065 9915491aeeba4ca9f527c41fc20b93ab 81 Pfam PF04221 RelB antitoxin 1 69 1.1E-14 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ C3Y93_09065 9915491aeeba4ca9f527c41fc20b93ab 81 Gene3D G3DSA:1.10.1220.10 1 81 4.9E-30 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 Gene3D G3DSA:3.90.800.10 125 233 3.4E-102 T 14-10-2018 C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 Gene3D G3DSA:2.40.240.10 364 567 3.5E-77 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 364 549 6.7E-56 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 Gene3D G3DSA:2.40.240.10 372 486 3.5E-77 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 SUPERFAMILY SSF50715 364 569 4.29E-68 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 PRINTS PR00987 Glutamyl-tRNA synthetase signature 234 244 2.7E-7 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 PRINTS PR00987 Glutamyl-tRNA synthetase signature 84 97 2.7E-7 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 PRINTS PR00987 Glutamyl-tRNA synthetase signature 55 67 2.7E-7 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 51 361 4.2E-108 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 SUPERFAMILY SSF52374 51 370 2.34E-95 T 14-10-2018 C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 52 570 1.4E-227 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 Gene3D G3DSA:1.10.1160.10 285 363 3.6E-33 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 Gene3D G3DSA:3.40.50.620 52 271 3.4E-102 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_03470 90fc7e70e9879a6018226a34b0fea9d0 574 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 17 570 50.062 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 C3Y93_14060 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF12848 ABC transporter 167 283 5.1E-9 T 14-10-2018 IPR032781 ABC-transporter extension domain C3Y93_14060 5418973fc0e6b837c762acaac063f2e8 491 SUPERFAMILY SSF52540 288 485 2.59E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_14060 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF00005 ABC transporter 313 436 5.3E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_14060 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 289 490 2.2E-41 T 14-10-2018 C3Y93_14060 5418973fc0e6b837c762acaac063f2e8 491 SUPERFAMILY SSF52540 3 189 1.88E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_14060 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 63 234 1.9E-28 T 14-10-2018 C3Y93_14060 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 4 62 3.7E-8 T 14-10-2018 C3Y93_14060 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF00005 ABC transporter 24 56 9.4E-6 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_14060 5418973fc0e6b837c762acaac063f2e8 491 SMART SM00382 321 488 4.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_14060 5418973fc0e6b837c762acaac063f2e8 491 SMART SM00382 29 173 4.8E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_14105 285ed34de1e34401121b61c709f5992d 270 SUPERFAMILY SSF56281 51 261 7.58E-31 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_14105 285ed34de1e34401121b61c709f5992d 270 SMART SM00849 74 250 2.4E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_14105 285ed34de1e34401121b61c709f5992d 270 Pfam PF00753 Metallo-beta-lactamase superfamily 72 232 5.4E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_14105 285ed34de1e34401121b61c709f5992d 270 Gene3D G3DSA:3.60.15.10 29 270 2.6E-97 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_09415 0354051089922ebf8a56e456bee3516b 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 9.9E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09415 0354051089922ebf8a56e456bee3516b 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.9E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09415 0354051089922ebf8a56e456bee3516b 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 9.9E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09415 0354051089922ebf8a56e456bee3516b 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 9.9E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09415 0354051089922ebf8a56e456bee3516b 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.9E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09415 0354051089922ebf8a56e456bee3516b 279 Pfam PF00106 short chain dehydrogenase 7 199 1.3E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09415 0354051089922ebf8a56e456bee3516b 279 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3Y93_09415 0354051089922ebf8a56e456bee3516b 279 Gene3D G3DSA:3.40.50.720 1 277 8.5E-69 T 14-10-2018 C3Y93_09415 0354051089922ebf8a56e456bee3516b 279 SUPERFAMILY SSF51735 1 269 2.55E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_09415 0354051089922ebf8a56e456bee3516b 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09415 0354051089922ebf8a56e456bee3516b 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09415 0354051089922ebf8a56e456bee3516b 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09415 0354051089922ebf8a56e456bee3516b 279 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 193 0.0095 T 14-10-2018 C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 Gene3D G3DSA:3.30.750.80 420 511 2.2E-32 T 14-10-2018 C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 Gene3D G3DSA:3.30.2130.30 12 269 6.4E-113 T 14-10-2018 C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 208 222 3.5E-5 T 14-10-2018 C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 320 332 3.5E-5 T 14-10-2018 C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 SUPERFAMILY SSF53335 423 731 2.5E-60 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 SMART SM00981 70 167 2.4E-8 T 14-10-2018 IPR004114 THUMP domain GO:0003723 C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 PIRSF PIRSF037618 6 733 9.1E-286 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 Gene3D G3DSA:3.40.50.150 512 731 1.1E-67 T 14-10-2018 C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 323 329 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 210 221 - T 14-10-2018 IPR000241 Putative RNA methylase domain C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 Pfam PF01170 Putative RNA methylase family UPF0020 175 370 5.9E-37 T 14-10-2018 IPR000241 Putative RNA methylase domain C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 Pfam PF02926 THUMP domain 43 154 1.1E-8 T 14-10-2018 IPR004114 THUMP domain GO:0003723 C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 507 702 1.3E-20 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 SUPERFAMILY SSF53335 162 366 1.64E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 Gene3D G3DSA:3.40.50.150 182 387 6.4E-113 T 14-10-2018 C3Y93_00655 b0be7f595a61b8639914d0f76e088852 734 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 10 732 29.432 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 C3Y93_12275 655269a690ef880c1ca9754cf7c32634 100 SUPERFAMILY SSF54909 1 96 2.09E-27 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel C3Y93_12275 655269a690ef880c1ca9754cf7c32634 100 Pfam PF03795 YCII-related domain 3 94 8.3E-21 T 14-10-2018 IPR005545 YCII-related C3Y93_12275 655269a690ef880c1ca9754cf7c32634 100 Gene3D G3DSA:3.30.70.1060 1 97 3.7E-31 T 14-10-2018 C3Y93_03110 261799b8c375c0a5ead7aab29175ee92 100 Gene3D G3DSA:3.30.10.10 33 99 3.3E-17 T 14-10-2018 C3Y93_03110 261799b8c375c0a5ead7aab29175ee92 100 Pfam PF11720 Peptidase inhibitor I78 family 40 100 2.6E-8 T 14-10-2018 IPR021719 Proteinase inhibitor I78 C3Y93_03110 261799b8c375c0a5ead7aab29175ee92 100 SUPERFAMILY SSF54654 45 96 8.5E-5 T 14-10-2018 IPR036354 Proteinase inhibitor I13, potato inhibitor I superfamily C3Y93_08805 4b0243fe911f61a88421914353855e9a 450 SUPERFAMILY SSF103473 8 443 2.75E-82 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_08805 4b0243fe911f61a88421914353855e9a 450 Gene3D G3DSA:1.20.1250.20 14 228 1.1E-45 T 14-10-2018 C3Y93_08805 4b0243fe911f61a88421914353855e9a 450 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 6 407 3.2E-133 T 14-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 C3Y93_08805 4b0243fe911f61a88421914353855e9a 450 Pfam PF07690 Major Facilitator Superfamily 28 341 5.7E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_08805 4b0243fe911f61a88421914353855e9a 450 Gene3D G3DSA:1.20.1250.20 245 445 4.2E-25 T 14-10-2018 C3Y93_08805 4b0243fe911f61a88421914353855e9a 450 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C3Y93_06795 10381f9fa00fc40899385c7acacecbe1 382 Gene3D G3DSA:2.130.10.10 43 381 3.0E-83 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C3Y93_06795 10381f9fa00fc40899385c7acacecbe1 382 Pfam PF13360 PQQ-like domain 70 309 1.4E-38 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C3Y93_06795 10381f9fa00fc40899385c7acacecbe1 382 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 9 380 2.5E-109 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB C3Y93_06795 10381f9fa00fc40899385c7acacecbe1 382 SMART SM00564 145 176 6.2E-4 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3Y93_06795 10381f9fa00fc40899385c7acacecbe1 382 SMART SM00564 190 222 77.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3Y93_06795 10381f9fa00fc40899385c7acacecbe1 382 SMART SM00564 280 311 8.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3Y93_06795 10381f9fa00fc40899385c7acacecbe1 382 SMART SM00564 321 352 1.7 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3Y93_06795 10381f9fa00fc40899385c7acacecbe1 382 SMART SM00564 104 136 0.0013 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3Y93_06795 10381f9fa00fc40899385c7acacecbe1 382 SMART SM00564 242 273 4.9 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C3Y93_06795 10381f9fa00fc40899385c7acacecbe1 382 SUPERFAMILY SSF50998 43 369 6.8E-60 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily C3Y93_06795 10381f9fa00fc40899385c7acacecbe1 382 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 381 28.358 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 Gene3D G3DSA:3.30.420.40 22 374 5.1E-112 T 14-10-2018 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 Gene3D G3DSA:3.90.640.10 239 311 5.1E-112 T 14-10-2018 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 SUPERFAMILY SSF53067 201 376 5.99E-48 T 14-10-2018 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 615 42.674 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 Gene3D G3DSA:1.20.1270.10 519 614 2.5E-22 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 PRINTS PR00301 70kDa heat shock protein signature 212 222 5.4E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 PRINTS PR00301 70kDa heat shock protein signature 48 60 5.4E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 PRINTS PR00301 70kDa heat shock protein signature 329 345 5.4E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 PRINTS PR00301 70kDa heat shock protein signature 149 169 5.4E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 PRINTS PR00301 70kDa heat shock protein signature 465 481 5.4E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 PRINTS PR00301 70kDa heat shock protein signature 360 380 5.4E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 PRINTS PR00301 70kDa heat shock protein signature 20 33 5.4E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 PRINTS PR00301 70kDa heat shock protein signature 384 403 5.4E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 SUPERFAMILY SSF53067 19 194 9.39E-53 T 14-10-2018 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 SUPERFAMILY SSF100934 503 614 9.42E-29 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 Gene3D G3DSA:3.30.420.40 191 361 5.1E-112 T 14-10-2018 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 Pfam PF00012 Hsp70 protein 21 594 1.2E-173 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 SUPERFAMILY SSF100920 384 535 8.37E-49 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 Gene3D G3DSA:2.60.34.10 380 515 1.1E-47 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 206 219 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C3Y93_02090 3b61a5be06c5698a56912773f4ad1cf1 619 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 614 3.0E-264 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 C3Y93_01925 cdd7e4f69bd39af3a6c9f8c6e7bd786e 844 Pfam PF01103 Surface antigen 452 844 7.6E-78 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 C3Y93_01925 cdd7e4f69bd39af3a6c9f8c6e7bd786e 844 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 3 844 23.36 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 C3Y93_01925 cdd7e4f69bd39af3a6c9f8c6e7bd786e 844 Gene3D G3DSA:3.10.20.310 179 268 1.0E-19 T 14-10-2018 C3Y93_01925 cdd7e4f69bd39af3a6c9f8c6e7bd786e 844 Gene3D G3DSA:3.10.20.310 269 349 5.6E-14 T 14-10-2018 C3Y93_01925 cdd7e4f69bd39af3a6c9f8c6e7bd786e 844 PIRSF PIRSF006076 1 844 9.3E-240 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 C3Y93_01925 cdd7e4f69bd39af3a6c9f8c6e7bd786e 844 Pfam PF07244 Surface antigen variable number repeat 351 425 9.4E-14 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C3Y93_01925 cdd7e4f69bd39af3a6c9f8c6e7bd786e 844 Pfam PF07244 Surface antigen variable number repeat 96 176 7.2E-13 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C3Y93_01925 cdd7e4f69bd39af3a6c9f8c6e7bd786e 844 Pfam PF07244 Surface antigen variable number repeat 271 348 2.3E-10 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C3Y93_01925 cdd7e4f69bd39af3a6c9f8c6e7bd786e 844 Pfam PF07244 Surface antigen variable number repeat 180 267 4.1E-13 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C3Y93_01925 cdd7e4f69bd39af3a6c9f8c6e7bd786e 844 Gene3D G3DSA:3.10.20.310 96 177 3.6E-15 T 14-10-2018 C3Y93_01925 cdd7e4f69bd39af3a6c9f8c6e7bd786e 844 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 28 844 1.0E-235 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 C3Y93_01925 cdd7e4f69bd39af3a6c9f8c6e7bd786e 844 Gene3D G3DSA:3.10.20.310 22 95 3.0E-17 T 14-10-2018 C3Y93_01925 cdd7e4f69bd39af3a6c9f8c6e7bd786e 844 Gene3D G3DSA:3.10.20.310 350 425 5.7E-22 T 14-10-2018 C3Y93_05360 1ced19adb3e09243e940a1658014e26b 237 SUPERFAMILY SSF48317 12 223 1.9E-11 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily C3Y93_05360 1ced19adb3e09243e940a1658014e26b 237 Gene3D G3DSA:1.20.144.10 121 235 4.5E-6 T 14-10-2018 C3Y93_06775 9f308b7101b908800444f34929e33e43 155 Pfam PF12836 Helix-hairpin-helix motif 92 153 1.2E-23 T 14-10-2018 C3Y93_06775 9f308b7101b908800444f34929e33e43 155 SMART SM00278 133 152 87.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3Y93_06775 9f308b7101b908800444f34929e33e43 155 SMART SM00278 103 122 0.021 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3Y93_06775 9f308b7101b908800444f34929e33e43 155 SUPERFAMILY SSF47781 85 153 3.89E-27 T 14-10-2018 IPR010994 RuvA domain 2-like C3Y93_06775 9f308b7101b908800444f34929e33e43 155 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 93 154 3.2E-23 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain C3Y93_06775 9f308b7101b908800444f34929e33e43 155 Gene3D G3DSA:1.10.150.280 84 155 7.8E-23 T 14-10-2018 C3Y93_01960 8095c9383f540b3f640834998af2bcae 127 Pfam PF01527 Transposase 14 69 2.9E-10 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 C3Y93_01960 8095c9383f540b3f640834998af2bcae 127 SUPERFAMILY SSF46689 15 67 3.4E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_04070 8095c9383f540b3f640834998af2bcae 127 Pfam PF01527 Transposase 14 69 2.9E-10 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 C3Y93_04070 8095c9383f540b3f640834998af2bcae 127 SUPERFAMILY SSF46689 15 67 3.4E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_01260 8095c9383f540b3f640834998af2bcae 127 Pfam PF01527 Transposase 14 69 2.9E-10 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 C3Y93_01260 8095c9383f540b3f640834998af2bcae 127 SUPERFAMILY SSF46689 15 67 3.4E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_12700 fd0f44fa397d77f717b0792ca05959de 237 Gene3D G3DSA:3.30.70.2970 51 167 9.8E-14 T 14-10-2018 C3Y93_12700 fd0f44fa397d77f717b0792ca05959de 237 Gene3D G3DSA:3.30.110.170 41 208 9.8E-14 T 14-10-2018 C3Y93_12700 fd0f44fa397d77f717b0792ca05959de 237 PIRSF PIRSF029033 1 237 3.9E-92 T 14-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein C3Y93_12700 fd0f44fa397d77f717b0792ca05959de 237 Pfam PF04402 Protein of unknown function (DUF541) 39 210 2.3E-17 T 14-10-2018 IPR007497 Protein of unknown function DUF541 C3Y93_01100 2a2405ae6a0170d699956a5bddc3eefa 1019 Pfam PF00589 Phage integrase family 535 666 3.5E-10 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3Y93_01100 2a2405ae6a0170d699956a5bddc3eefa 1019 SUPERFAMILY SSF56349 533 667 4.71E-15 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3Y93_09450 776ef8edcb013d02db1bce19fc5fef12 401 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 399 47.086 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 C3Y93_09450 776ef8edcb013d02db1bce19fc5fef12 401 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 4 397 1.1E-168 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 C3Y93_09450 776ef8edcb013d02db1bce19fc5fef12 401 Gene3D G3DSA:3.20.140.10 1 400 2.4E-150 T 14-10-2018 C3Y93_09450 776ef8edcb013d02db1bce19fc5fef12 401 SUPERFAMILY SSF51690 121 396 2.16E-89 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 C3Y93_09450 776ef8edcb013d02db1bce19fc5fef12 401 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 397 6.2E-82 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 C3Y93_09450 776ef8edcb013d02db1bce19fc5fef12 401 SUPERFAMILY SSF54675 2 139 2.75E-42 T 14-10-2018 C3Y93_09450 776ef8edcb013d02db1bce19fc5fef12 401 PIRSF PIRSF000484 1 384 1.8E-80 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 C3Y93_01470 2a208adeb2c072f57d5896499e8c845e 506 SUPERFAMILY SSF53613 226 505 4.36E-52 T 14-10-2018 IPR029056 Ribokinase-like C3Y93_01470 2a208adeb2c072f57d5896499e8c845e 506 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 220 505 18.291 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 C3Y93_01470 2a208adeb2c072f57d5896499e8c845e 506 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 446 456 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site C3Y93_01470 2a208adeb2c072f57d5896499e8c845e 506 Pfam PF03853 YjeF-related protein N-terminus 33 192 1.2E-33 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 C3Y93_01470 2a208adeb2c072f57d5896499e8c845e 506 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 229 506 5.5E-52 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 C3Y93_01470 2a208adeb2c072f57d5896499e8c845e 506 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 29 210 9.5E-31 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 C3Y93_01470 2a208adeb2c072f57d5896499e8c845e 506 SUPERFAMILY SSF64153 9 244 2.75E-48 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 C3Y93_01470 2a208adeb2c072f57d5896499e8c845e 506 Gene3D G3DSA:3.40.1190.20 226 506 4.7E-63 T 14-10-2018 IPR029056 Ribokinase-like C3Y93_01470 2a208adeb2c072f57d5896499e8c845e 506 PIRSF PIRSF017184 8 506 4.3E-98 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 C3Y93_01470 2a208adeb2c072f57d5896499e8c845e 506 Gene3D G3DSA:3.40.50.10260 7 216 1.1E-46 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 C3Y93_01470 2a208adeb2c072f57d5896499e8c845e 506 Pfam PF01256 Carbohydrate kinase 245 500 4.2E-42 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 C3Y93_02630 6e555312d02ecfb79336fb54a616fb2e 474 SMART SM00345 7 66 1.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3Y93_02630 6e555312d02ecfb79336fb54a616fb2e 474 Gene3D G3DSA:3.40.640.10 140 359 2.2E-80 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_02630 6e555312d02ecfb79336fb54a616fb2e 474 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.6E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3Y93_02630 6e555312d02ecfb79336fb54a616fb2e 474 Gene3D G3DSA:1.10.10.10 2 67 2.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_02630 6e555312d02ecfb79336fb54a616fb2e 474 SUPERFAMILY SSF53383 61 467 2.39E-81 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_02630 6e555312d02ecfb79336fb54a616fb2e 474 Gene3D G3DSA:3.90.1150.10 98 464 2.2E-80 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_02630 6e555312d02ecfb79336fb54a616fb2e 474 Pfam PF00155 Aminotransferase class I and II 146 446 3.4E-30 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3Y93_02630 6e555312d02ecfb79336fb54a616fb2e 474 SUPERFAMILY SSF46785 3 69 9.8E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_11535 6f039df1e6756dc7f883bc40c5793675 613 Gene3D G3DSA:3.40.50.720 399 559 1.3E-36 T 14-10-2018 C3Y93_11535 6f039df1e6756dc7f883bc40c5793675 613 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 279 1.7E-79 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 C3Y93_11535 6f039df1e6756dc7f883bc40c5793675 613 Pfam PF00999 Sodium/hydrogen exchanger family 9 370 7.1E-70 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 C3Y93_11535 6f039df1e6756dc7f883bc40c5793675 613 Gene3D G3DSA:1.20.1530.20 1 379 1.9E-84 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily C3Y93_11535 6f039df1e6756dc7f883bc40c5793675 613 SUPERFAMILY SSF51735 400 527 4.18E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_11535 6f039df1e6756dc7f883bc40c5793675 613 Pfam PF02254 TrkA-N domain 401 512 7.5E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 C3Y93_09080 03fe2411647b1b8a34b8d59f32db052f 603 ProSitePatterns PS00079 Multicopper oxidases signature 1. 546 566 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site C3Y93_09080 03fe2411647b1b8a34b8d59f32db052f 603 SUPERFAMILY SSF49503 18 174 2.41E-34 T 14-10-2018 IPR008972 Cupredoxin C3Y93_09080 03fe2411647b1b8a34b8d59f32db052f 603 SUPERFAMILY SSF49503 156 361 3.42E-40 T 14-10-2018 IPR008972 Cupredoxin C3Y93_09080 03fe2411647b1b8a34b8d59f32db052f 603 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 24 568 6.0E-193 T 14-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 C3Y93_09080 03fe2411647b1b8a34b8d59f32db052f 603 Gene3D G3DSA:2.60.40.420 17 144 6.6E-37 T 14-10-2018 IPR008972 Cupredoxin C3Y93_09080 03fe2411647b1b8a34b8d59f32db052f 603 ProSitePatterns PS00080 Multicopper oxidases signature 2. 551 562 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 C3Y93_09080 03fe2411647b1b8a34b8d59f32db052f 603 Pfam PF07731 Multicopper oxidase 460 569 6.1E-26 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 C3Y93_09080 03fe2411647b1b8a34b8d59f32db052f 603 Pfam PF00394 Multicopper oxidase 159 332 8.0E-27 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 C3Y93_09080 03fe2411647b1b8a34b8d59f32db052f 603 Pfam PF07732 Multicopper oxidase 35 145 3.2E-34 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 C3Y93_09080 03fe2411647b1b8a34b8d59f32db052f 603 Gene3D G3DSA:2.60.40.420 157 355 8.5E-36 T 14-10-2018 IPR008972 Cupredoxin C3Y93_09080 03fe2411647b1b8a34b8d59f32db052f 603 SUPERFAMILY SSF49503 420 568 1.94E-33 T 14-10-2018 IPR008972 Cupredoxin C3Y93_12115 de16324da03071b223b17fd43fbbeaa6 292 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 205 282 7.0E-13 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 C3Y93_12115 de16324da03071b223b17fd43fbbeaa6 292 SUPERFAMILY SSF74653 187 285 6.28E-17 T 14-10-2018 C3Y93_12115 de16324da03071b223b17fd43fbbeaa6 292 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 207 284 2.9E-15 T 14-10-2018 IPR006260 TonB/TolA, C-terminal C3Y93_13135 8f0168a0ef30ed3bfb8832fa40485b06 193 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 C3Y93_13135 8f0168a0ef30ed3bfb8832fa40485b06 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 181 34.296 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 C3Y93_13135 8f0168a0ef30ed3bfb8832fa40485b06 193 Gene3D G3DSA:3.40.50.1470 1 193 3.5E-74 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 C3Y93_13135 8f0168a0ef30ed3bfb8832fa40485b06 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 188 1.4E-63 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 C3Y93_13135 8f0168a0ef30ed3bfb8832fa40485b06 193 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 C3Y93_13135 8f0168a0ef30ed3bfb8832fa40485b06 193 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 1.9E-53 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 C3Y93_13135 8f0168a0ef30ed3bfb8832fa40485b06 193 SUPERFAMILY SSF53178 5 192 3.27E-68 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 C3Y93_04465 ba79d06386401962999226f28f7cc0a0 206 Gene3D G3DSA:1.20.1510.10 18 199 1.4E-7 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3Y93_04465 ba79d06386401962999226f28f7cc0a0 206 SUPERFAMILY SSF161111 16 198 1.96E-32 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3Y93_04465 ba79d06386401962999226f28f7cc0a0 206 Pfam PF01545 Cation efflux family 22 197 5.3E-11 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C3Y93_08180 c96c2c501314e5faa1a557e5ca0ae15b 97 Gene3D G3DSA:3.30.2310.20 1 94 7.7E-23 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C3Y93_08180 c96c2c501314e5faa1a557e5ca0ae15b 97 PIRSF PIRSF029218 1 96 4.8E-33 T 14-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 C3Y93_08180 c96c2c501314e5faa1a557e5ca0ae15b 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 1.7E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 Gene3D G3DSA:3.30.310.50 385 474 2.2E-16 T 14-10-2018 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 462 1.7E-5 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 12 133 1.4E-28 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 SUPERFAMILY SSF53738 270 371 1.37E-22 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 SUPERFAMILY SSF53738 4 176 5.1E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 Gene3D G3DSA:3.40.120.10 183 260 7.2E-27 T 14-10-2018 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 SUPERFAMILY SSF53738 166 266 2.12E-26 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 Gene3D G3DSA:3.40.120.10 2 143 2.9E-34 T 14-10-2018 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 99 108 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 215 228 6.8E-18 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 181 200 6.8E-18 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 244 259 6.8E-18 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 98 112 6.8E-18 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 SUPERFAMILY SSF55957 391 471 2.35E-13 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 Gene3D G3DSA:3.40.120.10 264 383 7.2E-31 T 14-10-2018 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 270 382 2.1E-18 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_06235 7f6774f4b92d6cdd0b13eb12b8c77c1b 480 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 167 262 3.4E-25 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_06275 33dd9d54035b1bb287c93c75426c1a3e 90 SUPERFAMILY SSF55229 38 89 2.48E-11 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 C3Y93_06275 33dd9d54035b1bb287c93c75426c1a3e 90 Hamap MF_00262 Cell division topological specificity factor [minE]. 4 90 15.315 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 C3Y93_06275 33dd9d54035b1bb287c93c75426c1a3e 90 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 13 88 5.2E-20 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 C3Y93_06275 33dd9d54035b1bb287c93c75426c1a3e 90 Pfam PF03776 Septum formation topological specificity factor MinE 17 87 4.8E-19 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 C3Y93_06275 33dd9d54035b1bb287c93c75426c1a3e 90 Gene3D G3DSA:3.30.1070.10 21 88 7.9E-20 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 C3Y93_07230 bca954a56ec765caea533353cc51c017 768 Pfam PF04607 Region found in RelA / SpoT proteins 274 383 4.1E-34 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 C3Y93_07230 bca954a56ec765caea533353cc51c017 768 SUPERFAMILY SSF55021 689 765 8.33E-13 T 14-10-2018 C3Y93_07230 bca954a56ec765caea533353cc51c017 768 Pfam PF13328 HD domain 68 214 5.8E-37 T 14-10-2018 IPR003607 HD/PDEase domain C3Y93_07230 bca954a56ec765caea533353cc51c017 768 SUPERFAMILY SSF81301 231 402 7.68E-59 T 14-10-2018 C3Y93_07230 bca954a56ec765caea533353cc51c017 768 Gene3D G3DSA:3.10.20.30 431 502 1.3E-28 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3Y93_07230 bca954a56ec765caea533353cc51c017 768 Gene3D G3DSA:1.10.3210.10 30 230 1.5E-41 T 14-10-2018 C3Y93_07230 bca954a56ec765caea533353cc51c017 768 Gene3D G3DSA:3.30.460.10 232 362 2.2E-50 T 14-10-2018 C3Y93_07230 bca954a56ec765caea533353cc51c017 768 SMART SM00954 274 383 1.5E-60 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 C3Y93_07230 bca954a56ec765caea533353cc51c017 768 Pfam PF13291 ACT domain 689 763 2.0E-18 T 14-10-2018 IPR002912 ACT domain C3Y93_07230 bca954a56ec765caea533353cc51c017 768 SUPERFAMILY SSF81271 433 493 3.92E-18 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 C3Y93_07230 bca954a56ec765caea533353cc51c017 768 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 77 762 2.3E-172 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 C3Y93_07230 bca954a56ec765caea533353cc51c017 768 Pfam PF02824 TGS domain 434 493 2.7E-18 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 C3Y93_07230 bca954a56ec765caea533353cc51c017 768 Gene3D G3DSA:3.30.70.260 690 766 2.3E-17 T 14-10-2018 C3Y93_07230 bca954a56ec765caea533353cc51c017 768 SUPERFAMILY SSF109604 31 229 8.16E-43 T 14-10-2018 C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 Pfam PF04851 Type III restriction enzyme, res subunit 17 89 1.5E-10 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 SMART SM00490 461 547 2.4E-20 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 Pfam PF00271 Helicase conserved C-terminal domain 442 545 5.2E-18 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 Hamap MF_00204 UvrABC system protein B [uvrB]. 5 670 43.257 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 SMART SM00487 11 427 6.6E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 Gene3D G3DSA:3.40.50.300 271 415 1.1E-52 T 14-10-2018 C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 Gene3D G3DSA:3.40.50.300 416 591 1.0E-48 T 14-10-2018 C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 Gene3D G3DSA:4.10.860.10 616 674 8.6E-9 T 14-10-2018 C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 Pfam PF12344 Ultra-violet resistance protein B 553 594 2.0E-21 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 7 668 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 SUPERFAMILY SSF46600 632 672 3.53E-11 T 14-10-2018 IPR036876 UVR domain superfamily C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 SUPERFAMILY SSF52540 5 416 1.09E-143 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 Pfam PF02151 UvrB/uvrC motif 638 670 5.3E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 SUPERFAMILY SSF52540 35 586 2.88E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00305 7b50f1175ab86cc445a2bbe77a869997 675 Gene3D G3DSA:3.40.50.300 1 236 9.3E-76 T 14-10-2018 C3Y93_01940 346b4bfb4fa094238cec993f571c5654 161 Pfam PF07977 FabA-like domain 25 149 4.1E-32 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C3Y93_01940 346b4bfb4fa094238cec993f571c5654 161 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 16 157 31.009 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C3Y93_01940 346b4bfb4fa094238cec993f571c5654 161 SUPERFAMILY SSF54637 18 159 1.53E-45 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_01940 346b4bfb4fa094238cec993f571c5654 161 Gene3D G3DSA:3.10.129.10 9 158 5.9E-55 T 14-10-2018 C3Y93_01940 346b4bfb4fa094238cec993f571c5654 161 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 16 153 2.6E-56 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C3Y93_13825 c330938da3cac19fa473b8b4f262d11a 162 SUPERFAMILY SSF64288 9 158 1.57E-38 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily C3Y93_13825 c330938da3cac19fa473b8b4f262d11a 162 Gene3D G3DSA:3.40.1410.10 1 158 4.4E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily C3Y93_13825 c330938da3cac19fa473b8b4f262d11a 162 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 1 158 20.894 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 C3Y93_13825 c330938da3cac19fa473b8b4f262d11a 162 Pfam PF04345 Chorismate lyase 13 154 5.5E-21 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 C3Y93_03205 4bba5bee0e2c54b449f77511fd2dc46c 226 Gene3D G3DSA:3.30.2010.10 118 218 2.2E-16 T 14-10-2018 C3Y93_03205 4bba5bee0e2c54b449f77511fd2dc46c 226 Pfam PF01863 Protein of unknown function DUF45 19 217 8.9E-43 T 14-10-2018 IPR002725 Protein of unknown function DUF45 C3Y93_08345 3e5147dbabbdcace1d2979bec5ade62d 502 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 319 4.7E-112 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 C3Y93_08345 3e5147dbabbdcace1d2979bec5ade62d 502 Gene3D G3DSA:1.10.10.350 370 493 2.3E-28 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C3Y93_08345 3e5147dbabbdcace1d2979bec5ade62d 502 SUPERFAMILY SSF52374 3 307 2.68E-114 T 14-10-2018 C3Y93_08345 3e5147dbabbdcace1d2979bec5ade62d 502 SUPERFAMILY SSF48163 313 471 3.92E-34 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C3Y93_08345 3e5147dbabbdcace1d2979bec5ade62d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 2.1E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3Y93_08345 3e5147dbabbdcace1d2979bec5ade62d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 202 2.1E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3Y93_08345 3e5147dbabbdcace1d2979bec5ade62d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.1E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3Y93_08345 3e5147dbabbdcace1d2979bec5ade62d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 216 2.1E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3Y93_08345 3e5147dbabbdcace1d2979bec5ade62d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 2.1E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3Y93_08345 3e5147dbabbdcace1d2979bec5ade62d 502 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 468 4.1E-146 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C3Y93_08345 3e5147dbabbdcace1d2979bec5ade62d 502 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_08345 3e5147dbabbdcace1d2979bec5ade62d 502 Gene3D G3DSA:3.40.50.620 1 327 4.4E-152 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_08345 3e5147dbabbdcace1d2979bec5ade62d 502 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 470 30.282 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C3Y93_00325 42b147774841ab155947169d4a4681a7 120 Pfam PF01638 HxlR-like helix-turn-helix 26 113 3.2E-28 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type C3Y93_00325 42b147774841ab155947169d4a4681a7 120 Gene3D G3DSA:1.10.10.10 3 120 2.7E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_00325 42b147774841ab155947169d4a4681a7 120 SUPERFAMILY SSF46785 12 113 1.3E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_01985 a72dc450d9a98f9db6237ee6b8ccd4fa 146 Pfam PF01479 S4 domain 14 58 3.8E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_01985 a72dc450d9a98f9db6237ee6b8ccd4fa 146 PIRSF PIRSF016821 10 135 3.6E-40 T 14-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 C3Y93_01985 a72dc450d9a98f9db6237ee6b8ccd4fa 146 Gene3D G3DSA:3.10.290.10 6 112 5.0E-36 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3Y93_01985 a72dc450d9a98f9db6237ee6b8ccd4fa 146 SMART SM00363 13 76 3.4E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_01985 a72dc450d9a98f9db6237ee6b8ccd4fa 146 SUPERFAMILY SSF55174 12 107 3.14E-26 T 14-10-2018 C3Y93_06325 d5b0e22ce10170b0c32a17aa96882948 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.5E-64 T 14-10-2018 IPR023798 Ribosomal protein S7 domain C3Y93_06325 d5b0e22ce10170b0c32a17aa96882948 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 1.2E-67 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 C3Y93_06325 d5b0e22ce10170b0c32a17aa96882948 156 PIRSF PIRSF002122 3 156 6.9E-59 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 C3Y93_06325 d5b0e22ce10170b0c32a17aa96882948 156 Gene3D G3DSA:1.10.455.10 2 155 3.7E-59 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily C3Y93_06325 d5b0e22ce10170b0c32a17aa96882948 156 SUPERFAMILY SSF47973 6 149 4.06E-59 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily C3Y93_06325 d5b0e22ce10170b0c32a17aa96882948 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.064 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 C3Y93_06325 d5b0e22ce10170b0c32a17aa96882948 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 667 1.8E-241 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 Gene3D G3DSA:1.10.287.610 6 71 8.1E-25 T 14-10-2018 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 411 438 2.5E-8 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 SMART SM00278 450 469 1200.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 SMART SM00278 550 569 240.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 SMART SM00278 486 505 18.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 SMART SM00278 518 537 13.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 117 146 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 Gene3D G3DSA:1.10.150.20 512 590 1.7E-27 T 14-10-2018 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 670 3.2E-10 T 14-10-2018 IPR001357 BRCT domain C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 SMART SM00532 6 452 3.6E-235 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 321 5.7E-122 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 Pfam PF12826 Helix-hairpin-helix motif 517 578 4.7E-21 T 14-10-2018 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 326 399 7.5E-32 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 SUPERFAMILY SSF47781 408 589 4.08E-61 T 14-10-2018 IPR010994 RuvA domain 2-like C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 Gene3D G3DSA:2.20.70.80 397 434 8.4E-14 T 14-10-2018 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 SUPERFAMILY SSF56091 8 320 1.69E-112 T 14-10-2018 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 PIRSF PIRSF001604 2 676 2.8E-240 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 Gene3D G3DSA:3.30.470.90 72 321 1.5E-95 T 14-10-2018 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 Gene3D G3DSA:3.40.50.10190 591 673 5.6E-26 T 14-10-2018 IPR036420 BRCT domain superfamily C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 Gene3D G3DSA:1.10.150.20 436 511 3.8E-27 T 14-10-2018 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 Hamap MF_01588 DNA ligase [ligA]. 8 671 50.272 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 SUPERFAMILY SSF50249 323 403 2.4E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 335 350 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 SMART SM00292 597 674 7.7E-10 T 14-10-2018 IPR001357 BRCT domain C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 SUPERFAMILY SSF52113 597 672 3.18E-17 T 14-10-2018 IPR036420 BRCT domain superfamily C3Y93_12785 cf208e8e45718470dd6cd02e0222c522 678 Gene3D G3DSA:2.40.50.140 322 394 3.2E-32 T 14-10-2018 C3Y93_11020 60681e78a15636f54d6a78b37e3c1683 259 SUPERFAMILY SSF69618 5 244 7.06E-38 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_11020 60681e78a15636f54d6a78b37e3c1683 259 Gene3D G3DSA:3.40.50.10090 4 231 9.6E-42 T 14-10-2018 C3Y93_11020 60681e78a15636f54d6a78b37e3c1683 259 Gene3D G3DSA:3.40.50.10090 32 166 9.6E-42 T 14-10-2018 C3Y93_11020 60681e78a15636f54d6a78b37e3c1683 259 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 230 8.4E-25 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_04230 594c470698b754fde28070f2c772b03c 401 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 20 395 1.0E-151 T 14-10-2018 IPR011673 Protein of unknown function DUF1615 C3Y93_04230 594c470698b754fde28070f2c772b03c 401 Pfam PF07759 Protein of unknown function (DUF1615) 52 395 8.9E-119 T 14-10-2018 IPR011673 Protein of unknown function DUF1615 C3Y93_05240 26fc62be7dc47f6f3b18369162037c98 280 PIRSF PIRSF005917 1 278 9.6E-99 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 C3Y93_05240 26fc62be7dc47f6f3b18369162037c98 280 Gene3D G3DSA:3.30.950.10 112 231 2.6E-39 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C3Y93_05240 26fc62be7dc47f6f3b18369162037c98 280 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 82 93 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 C3Y93_05240 26fc62be7dc47f6f3b18369162037c98 280 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 4 225 36.297 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 C3Y93_05240 26fc62be7dc47f6f3b18369162037c98 280 Gene3D G3DSA:3.40.1010.10 1 111 1.3E-43 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C3Y93_05240 26fc62be7dc47f6f3b18369162037c98 280 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 5 273 1.1E-83 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 C3Y93_05240 26fc62be7dc47f6f3b18369162037c98 280 SUPERFAMILY SSF53790 4 223 2.88E-80 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C3Y93_05240 26fc62be7dc47f6f3b18369162037c98 280 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 204 5.8E-29 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 C3Y93_10590 8d62950d5cce11b06927cf2cd29db608 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 4.6E-63 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3Y93_10590 8d62950d5cce11b06927cf2cd29db608 464 SUPERFAMILY SSF47917 349 463 6.8E-54 T 14-10-2018 C3Y93_10590 8d62950d5cce11b06927cf2cd29db608 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 4.5E-20 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3Y93_10590 8d62950d5cce11b06927cf2cd29db608 464 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 4 464 5.4E-254 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 C3Y93_10590 8d62950d5cce11b06927cf2cd29db608 464 Gene3D G3DSA:3.40.50.300 74 348 6.1E-113 T 14-10-2018 C3Y93_10590 8d62950d5cce11b06927cf2cd29db608 464 SMART SM00382 140 331 2.9E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_10590 8d62950d5cce11b06927cf2cd29db608 464 SUPERFAMILY SSF50615 2 73 2.62E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3Y93_10590 8d62950d5cce11b06927cf2cd29db608 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3Y93_10590 8d62950d5cce11b06927cf2cd29db608 464 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.95 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 C3Y93_10590 8d62950d5cce11b06927cf2cd29db608 464 Gene3D G3DSA:1.10.1140.10 349 464 1.1E-58 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3Y93_10590 8d62950d5cce11b06927cf2cd29db608 464 SUPERFAMILY SSF52540 75 352 3.1E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_10590 8d62950d5cce11b06927cf2cd29db608 464 Gene3D G3DSA:2.40.10.170 1 73 3.8E-30 T 14-10-2018 C3Y93_11885 9a3a48b87204c9e4bb351d7447613c1b 286 Pfam PF03466 LysR substrate binding domain 87 285 6.9E-43 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_11885 9a3a48b87204c9e4bb351d7447613c1b 286 Gene3D G3DSA:1.10.10.10 1 91 7.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_11885 9a3a48b87204c9e4bb351d7447613c1b 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_11885 9a3a48b87204c9e4bb351d7447613c1b 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_11885 9a3a48b87204c9e4bb351d7447613c1b 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_11885 9a3a48b87204c9e4bb351d7447613c1b 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 6.4E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_11885 9a3a48b87204c9e4bb351d7447613c1b 286 Gene3D G3DSA:3.40.190.290 92 286 4.6E-41 T 14-10-2018 C3Y93_11885 9a3a48b87204c9e4bb351d7447613c1b 286 SUPERFAMILY SSF46785 1 111 5.01E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_11885 9a3a48b87204c9e4bb351d7447613c1b 286 SUPERFAMILY SSF53850 88 285 1.25E-42 T 14-10-2018 C3Y93_09830 ebb6edd65d598c767445305614d8dfc3 446 Gene3D G3DSA:2.30.40.10 10 429 5.0E-197 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C3Y93_09830 ebb6edd65d598c767445305614d8dfc3 446 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 32 431 6.4E-190 T 14-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 C3Y93_09830 ebb6edd65d598c767445305614d8dfc3 446 Pfam PF01979 Amidohydrolase family 73 432 3.9E-70 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C3Y93_09830 ebb6edd65d598c767445305614d8dfc3 446 SUPERFAMILY SSF51338 33 437 5.52E-8 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C3Y93_09830 ebb6edd65d598c767445305614d8dfc3 446 Gene3D G3DSA:3.20.20.140 76 393 5.0E-197 T 14-10-2018 C3Y93_09830 ebb6edd65d598c767445305614d8dfc3 446 SUPERFAMILY SSF51556 75 378 1.2E-101 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3Y93_06825 ed78ca6c45c39e2bea4601bda24027b4 410 SUPERFAMILY SSF102114 135 355 9.94E-16 T 14-10-2018 C3Y93_06825 ed78ca6c45c39e2bea4601bda24027b4 410 Pfam PF04055 Radical SAM superfamily 139 316 9.5E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3Y93_06825 ed78ca6c45c39e2bea4601bda24027b4 410 Gene3D G3DSA:3.20.20.70 91 372 2.2E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_06825 ed78ca6c45c39e2bea4601bda24027b4 410 Gene3D G3DSA:1.10.150.530 29 90 3.7E-26 T 14-10-2018 C3Y93_06825 ed78ca6c45c39e2bea4601bda24027b4 410 PIRSF PIRSF006004 22 401 1.5E-149 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 C3Y93_06825 ed78ca6c45c39e2bea4601bda24027b4 410 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 26 392 2.7E-145 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 C3Y93_06825 ed78ca6c45c39e2bea4601bda24027b4 410 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 29 387 76.094 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 C3Y93_13250 91a969a264da6e2d6a8c29a40649f870 541 SUPERFAMILY SSF56317 1 248 3.53E-62 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C3Y93_13250 91a969a264da6e2d6a8c29a40649f870 541 TIGRFAM TIGR00552 nadE: NAD+ synthetase 270 513 1.5E-60 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 C3Y93_13250 91a969a264da6e2d6a8c29a40649f870 541 Pfam PF02540 NAD synthase 265 513 7.6E-74 T 14-10-2018 IPR022310 NAD/GMP synthase C3Y93_13250 91a969a264da6e2d6a8c29a40649f870 541 Pfam PF00795 Carbon-nitrogen hydrolase 5 244 7.0E-30 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 C3Y93_13250 91a969a264da6e2d6a8c29a40649f870 541 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 4 539 28.343 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 C3Y93_13250 91a969a264da6e2d6a8c29a40649f870 541 PIRSF PIRSF006630 1 540 8.0E-204 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 C3Y93_13250 91a969a264da6e2d6a8c29a40649f870 541 SUPERFAMILY SSF52402 259 522 2.26E-77 T 14-10-2018 C3Y93_13250 91a969a264da6e2d6a8c29a40649f870 541 Gene3D G3DSA:3.60.110.10 1 260 1.3E-104 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C3Y93_13250 91a969a264da6e2d6a8c29a40649f870 541 Gene3D G3DSA:3.40.50.620 261 541 1.6E-112 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_01820 6f5cfc427c73d061ff2e202e7b4dcb97 225 Gene3D G3DSA:3.90.1680.10 2 215 4.4E-42 T 14-10-2018 IPR036590 SOS response associated peptidase-like C3Y93_01820 6f5cfc427c73d061ff2e202e7b4dcb97 225 SUPERFAMILY SSF143081 22 208 2.49E-40 T 14-10-2018 IPR036590 SOS response associated peptidase-like C3Y93_01820 6f5cfc427c73d061ff2e202e7b4dcb97 225 Pfam PF02586 SOS response associated peptidase (SRAP) 31 210 7.1E-26 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) C3Y93_07385 2eab89532463b52d029336f88e85f1e2 713 Gene3D G3DSA:3.40.50.10950 398 707 2.1E-130 T 14-10-2018 C3Y93_07385 2eab89532463b52d029336f88e85f1e2 713 PIRSF PIRSF006107 1 712 0.0 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 C3Y93_07385 2eab89532463b52d029336f88e85f1e2 713 Pfam PF01515 Phosphate acetyl/butaryl transferase 390 704 8.1E-118 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 C3Y93_07385 2eab89532463b52d029336f88e85f1e2 713 Gene3D G3DSA:3.40.50.300 1 185 3.7E-13 T 14-10-2018 C3Y93_07385 2eab89532463b52d029336f88e85f1e2 713 Gene3D G3DSA:3.40.50.10750 527 680 2.1E-130 T 14-10-2018 C3Y93_07385 2eab89532463b52d029336f88e85f1e2 713 Pfam PF07085 DRTGG domain 233 342 4.4E-21 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 C3Y93_07385 2eab89532463b52d029336f88e85f1e2 713 Pfam PF13500 AAA domain 2 227 1.4E-25 T 14-10-2018 C3Y93_07385 2eab89532463b52d029336f88e85f1e2 713 SUPERFAMILY SSF53659 392 708 2.14E-89 T 14-10-2018 C3Y93_07385 2eab89532463b52d029336f88e85f1e2 713 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 405 704 5.7E-128 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 C3Y93_07385 2eab89532463b52d029336f88e85f1e2 713 SUPERFAMILY SSF75138 229 353 3.34E-18 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily C3Y93_07385 2eab89532463b52d029336f88e85f1e2 713 SUPERFAMILY SSF52540 1 239 3.32E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_07385 2eab89532463b52d029336f88e85f1e2 713 Gene3D G3DSA:3.40.1390.20 223 366 4.1E-14 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily C3Y93_09755 863ea0cff667f6ddcd909e20a38775db 360 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 340 5.9E-24 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal C3Y93_09755 863ea0cff667f6ddcd909e20a38775db 360 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 360 77.02 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 C3Y93_09755 863ea0cff667f6ddcd909e20a38775db 360 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 1.1E-81 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 C3Y93_09755 863ea0cff667f6ddcd909e20a38775db 360 Gene3D G3DSA:1.20.1050.90 116 294 3.2E-74 T 14-10-2018 C3Y93_09755 863ea0cff667f6ddcd909e20a38775db 360 SUPERFAMILY SSF52540 1 336 8.26E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_09755 863ea0cff667f6ddcd909e20a38775db 360 Gene3D G3DSA:3.40.50.300 6 329 3.2E-74 T 14-10-2018 C3Y93_11170 16f531487f66f2c253d626504fa6f30c 458 Pfam PF03553 Na+/H+ antiporter family 151 452 1.5E-64 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 C3Y93_11170 16f531487f66f2c253d626504fa6f30c 458 Pfam PF13726 Na+-H+ antiporter family 3 88 5.2E-27 T 14-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 Gene3D G3DSA:3.40.50.300 73 380 5.9E-111 T 14-10-2018 C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 7 530 1.9E-260 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 Pfam PF16658 Class II release factor RF3, C-terminal domain 388 515 3.6E-47 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 Gene3D G3DSA:3.30.70.3280 391 530 9.7E-53 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 59 74 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 Pfam PF00009 Elongation factor Tu GTP binding domain 14 278 3.8E-48 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 SUPERFAMILY SSF54980 394 469 5.04E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 170 4.4E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 Gene3D G3DSA:3.40.50.300 111 276 5.9E-111 T 14-10-2018 C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 SUPERFAMILY SSF50447 263 394 2.52E-27 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 SUPERFAMILY SSF52540 11 278 1.23E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 PRINTS PR00315 GTP-binding elongation factor signature 138 147 2.0E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 PRINTS PR00315 GTP-binding elongation factor signature 16 29 2.0E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 PRINTS PR00315 GTP-binding elongation factor signature 102 113 2.0E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 PRINTS PR00315 GTP-binding elongation factor signature 66 74 2.0E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 PRINTS PR00315 GTP-binding elongation factor signature 86 96 2.0E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_07335 8121d1a0a41395a741bfd08c91fea300 530 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 5 528 51.14 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 C3Y93_03930 71c807930ff7610bbece1019507a185d 290 Gene3D G3DSA:3.40.190.10 42 270 1.7E-76 T 14-10-2018 C3Y93_03930 71c807930ff7610bbece1019507a185d 290 Pfam PF03180 NLPA lipoprotein 43 277 1.7E-67 T 14-10-2018 IPR004872 Lipoprotein NlpA family C3Y93_03930 71c807930ff7610bbece1019507a185d 290 Gene3D G3DSA:3.40.190.10 118 229 1.7E-76 T 14-10-2018 C3Y93_03930 71c807930ff7610bbece1019507a185d 290 SUPERFAMILY SSF53850 38 279 1.96E-68 T 14-10-2018 C3Y93_11605 6c7a684a919db727654b4cb307848eea 291 Pfam PF01177 Asp/Glu/Hydantoin racemase 23 235 7.3E-28 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C3Y93_11605 6c7a684a919db727654b4cb307848eea 291 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C3Y93_11605 6c7a684a919db727654b4cb307848eea 291 SUPERFAMILY SSF53681 127 266 8.83E-29 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C3Y93_11605 6c7a684a919db727654b4cb307848eea 291 SUPERFAMILY SSF53681 22 124 1.14E-33 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C3Y93_11605 6c7a684a919db727654b4cb307848eea 291 Gene3D G3DSA:3.40.50.1860 22 263 1.5E-74 T 14-10-2018 C3Y93_11605 6c7a684a919db727654b4cb307848eea 291 TIGRFAM TIGR00067 glut_race: glutamate racemase 23 264 2.8E-65 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C3Y93_11605 6c7a684a919db727654b4cb307848eea 291 Gene3D G3DSA:3.40.50.1860 114 227 1.5E-74 T 14-10-2018 C3Y93_11605 6c7a684a919db727654b4cb307848eea 291 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 87 95 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C3Y93_11605 6c7a684a919db727654b4cb307848eea 291 Hamap MF_00258 Glutamate racemase [murI]. 21 279 34.11 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C3Y93_06770 bb18711f898205ac430f0fb56a02bafa 487 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 187 247 1.1E-11 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 C3Y93_06770 bb18711f898205ac430f0fb56a02bafa 487 Gene3D G3DSA:3.30.460.10 2 155 1.5E-47 T 14-10-2018 C3Y93_06770 bb18711f898205ac430f0fb56a02bafa 487 Pfam PF01743 Poly A polymerase head domain 34 159 2.5E-30 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 C3Y93_06770 bb18711f898205ac430f0fb56a02bafa 487 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 3 444 33.64 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 C3Y93_06770 bb18711f898205ac430f0fb56a02bafa 487 Gene3D G3DSA:1.10.3090.10 158 399 9.2E-66 T 14-10-2018 C3Y93_06770 bb18711f898205ac430f0fb56a02bafa 487 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 6 408 8.6E-118 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 C3Y93_06770 bb18711f898205ac430f0fb56a02bafa 487 Pfam PF12626 Polymerase A arginine-rich C-terminus 296 408 2.3E-26 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain C3Y93_06770 bb18711f898205ac430f0fb56a02bafa 487 SUPERFAMILY SSF81891 158 374 4.58E-36 T 14-10-2018 C3Y93_06770 bb18711f898205ac430f0fb56a02bafa 487 SUPERFAMILY SSF81301 10 156 1.2E-35 T 14-10-2018 C3Y93_06370 b6892f3980ef067cd8932d3079ca231a 163 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 158 41.131 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 C3Y93_06370 b6892f3980ef067cd8932d3079ca231a 163 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 6 75 2.7E-11 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 C3Y93_06370 b6892f3980ef067cd8932d3079ca231a 163 SUPERFAMILY SSF46767 77 158 5.36E-30 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 C3Y93_06370 b6892f3980ef067cd8932d3079ca231a 163 Gene3D G3DSA:1.10.10.10 77 162 9.5E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_06370 b6892f3980ef067cd8932d3079ca231a 163 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 157 6.3E-33 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 C3Y93_06370 b6892f3980ef067cd8932d3079ca231a 163 Gene3D G3DSA:3.30.160.70 3 74 2.3E-19 T 14-10-2018 C3Y93_06370 b6892f3980ef067cd8932d3079ca231a 163 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 158 6.2E-31 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 C3Y93_06370 b6892f3980ef067cd8932d3079ca231a 163 SUPERFAMILY SSF53155 3 83 6.08E-19 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 C3Y93_07930 e72e87fda6c783dbdd0531732a99b309 314 Gene3D G3DSA:3.40.1500.10 1 314 4.1E-137 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3Y93_07930 e72e87fda6c783dbdd0531732a99b309 314 SUPERFAMILY SSF102886 7 309 2.75E-126 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3Y93_07930 e72e87fda6c783dbdd0531732a99b309 314 PRINTS PR00073 Coprogen oxidase signature 55 76 1.9E-75 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3Y93_07930 e72e87fda6c783dbdd0531732a99b309 314 PRINTS PR00073 Coprogen oxidase signature 38 54 1.9E-75 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3Y93_07930 e72e87fda6c783dbdd0531732a99b309 314 PRINTS PR00073 Coprogen oxidase signature 269 295 1.9E-75 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3Y93_07930 e72e87fda6c783dbdd0531732a99b309 314 PRINTS PR00073 Coprogen oxidase signature 169 198 1.9E-75 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3Y93_07930 e72e87fda6c783dbdd0531732a99b309 314 PRINTS PR00073 Coprogen oxidase signature 241 268 1.9E-75 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3Y93_07930 e72e87fda6c783dbdd0531732a99b309 314 PRINTS PR00073 Coprogen oxidase signature 97 121 1.9E-75 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3Y93_07930 e72e87fda6c783dbdd0531732a99b309 314 PRINTS PR00073 Coprogen oxidase signature 132 154 1.9E-75 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3Y93_07930 e72e87fda6c783dbdd0531732a99b309 314 PIRSF PIRSF000166 2 310 1.0E-120 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3Y93_07930 e72e87fda6c783dbdd0531732a99b309 314 Pfam PF01218 Coproporphyrinogen III oxidase 11 309 1.3E-120 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3Y93_07930 e72e87fda6c783dbdd0531732a99b309 314 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 173 197 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C3Y93_10275 7b10ed89a038f6741c4de68058a8e249 573 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 519 536 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_10275 7b10ed89a038f6741c4de68058a8e249 573 Gene3D G3DSA:3.40.50.10490 22 528 4.3E-202 T 14-10-2018 C3Y93_10275 7b10ed89a038f6741c4de68058a8e249 573 SUPERFAMILY SSF53697 19 569 6.95E-175 T 14-10-2018 C3Y93_10275 7b10ed89a038f6741c4de68058a8e249 573 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 287 300 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_10275 7b10ed89a038f6741c4de68058a8e249 573 Gene3D G3DSA:3.40.50.10490 109 313 4.3E-202 T 14-10-2018 C3Y93_10275 7b10ed89a038f6741c4de68058a8e249 573 Gene3D G3DSA:1.10.1390.10 529 570 2.2E-15 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_10275 7b10ed89a038f6741c4de68058a8e249 573 Pfam PF00342 Phosphoglucose isomerase 59 564 2.2E-168 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_10275 7b10ed89a038f6741c4de68058a8e249 573 PRINTS PR00662 Glucose-6-phosphate isomerase signature 505 519 2.7E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_10275 7b10ed89a038f6741c4de68058a8e249 573 PRINTS PR00662 Glucose-6-phosphate isomerase signature 487 505 2.7E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_10275 7b10ed89a038f6741c4de68058a8e249 573 PRINTS PR00662 Glucose-6-phosphate isomerase signature 360 381 2.7E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_10275 7b10ed89a038f6741c4de68058a8e249 573 PRINTS PR00662 Glucose-6-phosphate isomerase signature 519 532 2.7E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_10275 7b10ed89a038f6741c4de68058a8e249 573 PRINTS PR00662 Glucose-6-phosphate isomerase signature 167 186 2.7E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_10275 7b10ed89a038f6741c4de68058a8e249 573 PRINTS PR00662 Glucose-6-phosphate isomerase signature 283 301 2.7E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_10275 7b10ed89a038f6741c4de68058a8e249 573 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 53 546 39.169 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_01285 7383c65fb4b5e5eb1a05d29935393c6b 255 SUPERFAMILY SSF55811 71 236 2.1E-45 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3Y93_01285 7383c65fb4b5e5eb1a05d29935393c6b 255 Pfam PF00293 NUDIX domain 122 227 2.7E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3Y93_01285 7383c65fb4b5e5eb1a05d29935393c6b 255 PRINTS PR00502 NUDIX hydrolase family signature 161 176 4.2E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C3Y93_01285 7383c65fb4b5e5eb1a05d29935393c6b 255 PRINTS PR00502 NUDIX hydrolase family signature 147 161 4.2E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C3Y93_01285 7383c65fb4b5e5eb1a05d29935393c6b 255 ProSitePatterns PS00893 Nudix box signature. 152 173 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C3Y93_01285 7383c65fb4b5e5eb1a05d29935393c6b 255 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 85 116 1.7E-11 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 C3Y93_01285 7383c65fb4b5e5eb1a05d29935393c6b 255 Gene3D G3DSA:3.90.79.20 1 117 1.3E-20 T 14-10-2018 C3Y93_01285 7383c65fb4b5e5eb1a05d29935393c6b 255 Gene3D G3DSA:3.90.79.10 118 246 1.1E-39 T 14-10-2018 C3Y93_04780 3e7599ce31e0bb342a381771b3f6fb20 187 Pfam PF17212 Tail tubular protein 7 86 6.1E-6 T 14-10-2018 IPR033767 Tail tubular protein Gp11 C3Y93_03140 4048349afb66da1639693736403cfa34 164 Gene3D G3DSA:3.90.950.20 1 157 7.8E-30 T 14-10-2018 IPR036653 CinA-like, C-terminal C3Y93_03140 4048349afb66da1639693736403cfa34 164 SUPERFAMILY SSF142433 3 155 3.27E-28 T 14-10-2018 IPR036653 CinA-like, C-terminal C3Y93_03140 4048349afb66da1639693736403cfa34 164 Pfam PF02464 Competence-damaged protein 3 142 1.0E-24 T 14-10-2018 IPR008136 CinA, C-terminal C3Y93_10830 b01d7050f9f4b3ba51b2d87e45ea3241 430 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 262 268 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3Y93_10830 b01d7050f9f4b3ba51b2d87e45ea3241 430 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 29 288 1.9E-26 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 C3Y93_10830 b01d7050f9f4b3ba51b2d87e45ea3241 430 SUPERFAMILY SSF53335 23 357 6.16E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_02470 a8eb0cb277c169f1366609d817c6a046 352 SUPERFAMILY SSF51735 147 316 3.63E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_02470 a8eb0cb277c169f1366609d817c6a046 352 SMART SM00829 10 350 0.0064 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C3Y93_02470 a8eb0cb277c169f1366609d817c6a046 352 Gene3D G3DSA:3.40.50.720 161 297 6.9E-91 T 14-10-2018 C3Y93_02470 a8eb0cb277c169f1366609d817c6a046 352 SUPERFAMILY SSF50129 1 181 5.63E-41 T 14-10-2018 IPR011032 GroES-like superfamily C3Y93_02470 a8eb0cb277c169f1366609d817c6a046 352 Pfam PF00107 Zinc-binding dehydrogenase 184 310 2.3E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C3Y93_02470 a8eb0cb277c169f1366609d817c6a046 352 Gene3D G3DSA:3.90.180.10 10 336 6.9E-91 T 14-10-2018 C3Y93_02470 a8eb0cb277c169f1366609d817c6a046 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 143 2.8E-22 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C3Y93_02470 a8eb0cb277c169f1366609d817c6a046 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 70 84 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 C3Y93_06720 461fbfe0157eeed27b2068151f4ca93c 427 Pfam PF01565 FAD binding domain 19 146 8.2E-20 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C3Y93_06720 461fbfe0157eeed27b2068151f4ca93c 427 Pfam PF04030 D-arabinono-1,4-lactone oxidase 170 417 2.9E-57 T 14-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 C3Y93_06720 461fbfe0157eeed27b2068151f4ca93c 427 Gene3D G3DSA:1.10.45.10 383 420 7.8E-10 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 C3Y93_06720 461fbfe0157eeed27b2068151f4ca93c 427 Gene3D G3DSA:3.30.70.2520 290 382 7.5E-27 T 14-10-2018 C3Y93_06720 461fbfe0157eeed27b2068151f4ca93c 427 Gene3D G3DSA:3.30.465.10 65 188 6.3E-30 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C3Y93_06720 461fbfe0157eeed27b2068151f4ca93c 427 SUPERFAMILY SSF56176 2 173 2.24E-36 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3Y93_06720 461fbfe0157eeed27b2068151f4ca93c 427 TIGRFAM TIGR01679 bact_FAD_ox: FAD-linked oxidoreductase 5 419 6.7E-131 T 14-10-2018 C3Y93_06720 461fbfe0157eeed27b2068151f4ca93c 427 PIRSF PIRSF000136 1 423 1.1E-99 T 14-10-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 C3Y93_06720 461fbfe0157eeed27b2068151f4ca93c 427 Gene3D G3DSA:3.30.43.10 1 63 3.9E-21 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 C3Y93_13275 82f3f9e5e797676866d8f663554162c6 632 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 19 631 1.8E-224 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_13275 82f3f9e5e797676866d8f663554162c6 632 SUPERFAMILY SSF56425 246 364 2.24E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_13275 82f3f9e5e797676866d8f663554162c6 632 Gene3D G3DSA:1.20.58.100 467 580 1.4E-30 T 14-10-2018 C3Y93_13275 82f3f9e5e797676866d8f663554162c6 632 Pfam PF00890 FAD binding domain 19 437 1.3E-112 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_13275 82f3f9e5e797676866d8f663554162c6 632 Pfam PF02910 Fumarate reductase flavoprotein C-term 496 631 1.0E-33 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_13275 82f3f9e5e797676866d8f663554162c6 632 SUPERFAMILY SSF46977 486 632 6.8E-39 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_13275 82f3f9e5e797676866d8f663554162c6 632 SUPERFAMILY SSF51905 18 470 4.76E-79 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_13275 82f3f9e5e797676866d8f663554162c6 632 PIRSF PIRSF000171 9 611 8.1E-33 T 14-10-2018 C3Y93_13275 82f3f9e5e797676866d8f663554162c6 632 Gene3D G3DSA:4.10.80.40 592 632 2.3E-5 T 14-10-2018 C3Y93_13275 82f3f9e5e797676866d8f663554162c6 632 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 53 62 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_03840 c51f78990c134c3ebeb51faf227e8dc9 481 Pfam PF00772 DnaB-like helicase N terminal domain 31 133 4.5E-27 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 C3Y93_03840 c51f78990c134c3ebeb51faf227e8dc9 481 Pfam PF03796 DnaB-like helicase C terminal domain 212 468 6.7E-108 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 C3Y93_03840 c51f78990c134c3ebeb51faf227e8dc9 481 SUPERFAMILY SSF52540 210 461 7.27E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_03840 c51f78990c134c3ebeb51faf227e8dc9 481 Gene3D G3DSA:1.10.860.10 24 188 9.9E-42 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal C3Y93_03840 c51f78990c134c3ebeb51faf227e8dc9 481 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 31 470 4.1E-164 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 C3Y93_03840 c51f78990c134c3ebeb51faf227e8dc9 481 Gene3D G3DSA:3.40.50.300 189 475 2.5E-102 T 14-10-2018 C3Y93_03840 c51f78990c134c3ebeb51faf227e8dc9 481 SUPERFAMILY SSF48024 29 141 5.75E-28 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 C3Y93_10890 5aba92de6fa3665e437819246c7ddcd9 520 SUPERFAMILY SSF55785 191 287 4.57E-5 T 14-10-2018 IPR035965 PAS domain superfamily C3Y93_10890 5aba92de6fa3665e437819246c7ddcd9 520 SMART SM00387 414 519 3.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_10890 5aba92de6fa3665e437819246c7ddcd9 520 SUPERFAMILY SSF47384 307 372 1.16E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3Y93_10890 5aba92de6fa3665e437819246c7ddcd9 520 Pfam PF00512 His Kinase A (phospho-acceptor) domain 312 373 7.6E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_10890 5aba92de6fa3665e437819246c7ddcd9 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 465 4.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_10890 5aba92de6fa3665e437819246c7ddcd9 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 4.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_10890 5aba92de6fa3665e437819246c7ddcd9 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 479 4.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_10890 5aba92de6fa3665e437819246c7ddcd9 520 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 415 514 7.5E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_10890 5aba92de6fa3665e437819246c7ddcd9 520 SMART SM00388 312 376 7.1E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_10890 5aba92de6fa3665e437819246c7ddcd9 520 SUPERFAMILY SSF55874 382 513 2.49E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_10890 5aba92de6fa3665e437819246c7ddcd9 520 Gene3D G3DSA:3.30.450.20 181 296 2.9E-5 T 14-10-2018 C3Y93_10890 5aba92de6fa3665e437819246c7ddcd9 520 Gene3D G3DSA:3.30.565.10 378 518 9.9E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_10890 5aba92de6fa3665e437819246c7ddcd9 520 Gene3D G3DSA:1.10.287.130 300 376 5.1E-13 T 14-10-2018 C3Y93_04270 a45977770ef70e6921a28558bd1bdfab 433 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 431 103.722 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 C3Y93_04270 a45977770ef70e6921a28558bd1bdfab 433 Gene3D G3DSA:3.90.1150.10 10 424 1.6E-174 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_04270 a45977770ef70e6921a28558bd1bdfab 433 Gene3D G3DSA:3.40.640.10 72 322 1.6E-174 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_04270 a45977770ef70e6921a28558bd1bdfab 433 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 275 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3Y93_04270 a45977770ef70e6921a28558bd1bdfab 433 Pfam PF00202 Aminotransferase class-III 35 400 8.5E-78 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3Y93_04270 a45977770ef70e6921a28558bd1bdfab 433 SUPERFAMILY SSF53383 5 430 1.37E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_04270 a45977770ef70e6921a28558bd1bdfab 433 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 430 5.5E-187 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 C3Y93_09150 6fd63c7c7d185996d9fdee0c21421ac0 567 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 22 563 1.0E-153 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 C3Y93_09150 6fd63c7c7d185996d9fdee0c21421ac0 567 Gene3D G3DSA:3.10.310.30 320 451 1.5E-31 T 14-10-2018 C3Y93_09150 6fd63c7c7d185996d9fdee0c21421ac0 567 Gene3D G3DSA:3.90.1640.30 46 318 1.4E-89 T 14-10-2018 C3Y93_09150 6fd63c7c7d185996d9fdee0c21421ac0 567 Pfam PF02272 DHHA1 domain 314 446 2.6E-25 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 C3Y93_09150 6fd63c7c7d185996d9fdee0c21421ac0 567 SUPERFAMILY SSF64182 52 449 8.89E-112 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily C3Y93_09150 6fd63c7c7d185996d9fdee0c21421ac0 567 Pfam PF01368 DHH family 71 203 2.4E-10 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Gene3D G3DSA:1.10.40.90 379 421 2.5E-20 T 14-10-2018 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Pfam PF04998 RNA polymerase Rpb1, domain 5 771 1312 4.5E-77 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Pfam PF04983 RNA polymerase Rpb1, domain 3 494 649 4.1E-29 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Gene3D G3DSA:2.40.50.100 1028 1122 3.9E-19 T 14-10-2018 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Gene3D G3DSA:1.10.132.30 646 795 3.1E-67 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Gene3D G3DSA:2.40.50.100 953 1027 2.0E-26 T 14-10-2018 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 18 1373 19.097 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 25 1362 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Gene3D G3DSA:1.10.274.100 495 645 4.5E-41 T 14-10-2018 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 SMART SM00663 240 519 1.2E-177 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 349 389 4.7E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 490 8.4E-27 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 SUPERFAMILY SSF64484 21 1361 0.0 T 14-10-2018 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Gene3D G3DSA:1.10.1790.20 1131 1310 5.7E-65 T 14-10-2018 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Pfam PF05000 RNA polymerase Rpb1, domain 4 679 768 1.6E-19 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Gene3D G3DSA:2.40.50.100 1147 1211 5.7E-65 T 14-10-2018 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Pfam PF04997 RNA polymerase Rpb1, domain 1 21 347 3.5E-88 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11140 bf5740046563f408ab4b508fe85efa10 1399 Gene3D G3DSA:1.10.150.390 1312 1373 3.2E-27 T 14-10-2018 C3Y93_06120 3430cb7f6faa803a2f435d4f2bec0320 271 Pfam PF00106 short chain dehydrogenase 5 194 6.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06120 3430cb7f6faa803a2f435d4f2bec0320 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.2E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06120 3430cb7f6faa803a2f435d4f2bec0320 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.2E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06120 3430cb7f6faa803a2f435d4f2bec0320 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.2E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06120 3430cb7f6faa803a2f435d4f2bec0320 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06120 3430cb7f6faa803a2f435d4f2bec0320 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06120 3430cb7f6faa803a2f435d4f2bec0320 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06120 3430cb7f6faa803a2f435d4f2bec0320 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06120 3430cb7f6faa803a2f435d4f2bec0320 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06120 3430cb7f6faa803a2f435d4f2bec0320 271 SUPERFAMILY SSF51735 2 261 3.01E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_06120 3430cb7f6faa803a2f435d4f2bec0320 271 Gene3D G3DSA:3.40.50.720 1 262 4.6E-53 T 14-10-2018 C3Y93_06120 3430cb7f6faa803a2f435d4f2bec0320 271 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 199 0.0057 T 14-10-2018 C3Y93_11775 042c8a80e87af402fa1aeae9b16a1744 421 Pfam PF03573 outer membrane porin, OprD family 24 421 1.3E-96 T 14-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 C3Y93_11775 042c8a80e87af402fa1aeae9b16a1744 421 Gene3D G3DSA:2.40.160.10 24 421 3.8E-115 T 14-10-2018 IPR023614 Porin domain superfamily C3Y93_10565 94b12579d392b38dd17e2e4359e55ecc 81 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10565 94b12579d392b38dd17e2e4359e55ecc 81 Pfam PF00137 ATP synthase subunit C 10 72 8.8E-9 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 C3Y93_10565 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.2E-7 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10565 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.2E-7 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10565 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.2E-7 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10565 94b12579d392b38dd17e2e4359e55ecc 81 Gene3D G3DSA:1.20.20.10 1 77 3.0E-27 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10565 94b12579d392b38dd17e2e4359e55ecc 81 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.2E-28 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 C3Y93_10565 94b12579d392b38dd17e2e4359e55ecc 81 SUPERFAMILY SSF81333 2 78 4.05E-18 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily C3Y93_10565 94b12579d392b38dd17e2e4359e55ecc 81 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.695 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_14050 b33f339f723b3c06041c6d58b3030f38 203 Gene3D G3DSA:3.40.50.1390 7 157 5.1E-29 T 14-10-2018 C3Y93_14050 b33f339f723b3c06041c6d58b3030f38 203 ProSitePatterns PS00398 Site-specific recombinases signature 2. 65 77 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 C3Y93_14050 b33f339f723b3c06041c6d58b3030f38 203 Pfam PF02796 Helix-turn-helix domain of resolvase 161 199 7.0E-9 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 C3Y93_14050 b33f339f723b3c06041c6d58b3030f38 203 ProSitePatterns PS00397 Site-specific recombinases active site. 9 17 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 C3Y93_14050 b33f339f723b3c06041c6d58b3030f38 203 SUPERFAMILY SSF53041 4 153 1.57E-28 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 C3Y93_14050 b33f339f723b3c06041c6d58b3030f38 203 SMART SM00857 6 157 4.6E-36 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C3Y93_14050 b33f339f723b3c06041c6d58b3030f38 203 Pfam PF00239 Resolvase, N terminal domain 8 153 2.9E-26 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 Gene3D G3DSA:3.90.600.10 329 427 4.9E-33 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 SMART SM01210 329 422 4.4E-48 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 SUPERFAMILY SSF52440 1 103 1.73E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.4E-84 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 8.8E-177 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 Gene3D G3DSA:3.30.1490.20 122 190 3.6E-28 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 SUPERFAMILY SSF51246 328 423 3.19E-30 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 Gene3D G3DSA:3.30.470.20 191 328 1.5E-56 T 14-10-2018 C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 43.296 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 Gene3D G3DSA:3.40.50.20 2 95 1.5E-36 T 14-10-2018 C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 SUPERFAMILY SSF56059 104 319 2.12E-63 T 14-10-2018 C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 SMART SM01209 103 296 7.6E-137 T 14-10-2018 C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 330 420 3.6E-27 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3Y93_03925 7e4f5a711581a27edc7c206f4226c8f0 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.2E-34 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3Y93_08270 c519cfb567685523a7aea3afd2396db2 727 SMART SM00965 301 349 8.9E-11 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 C3Y93_08270 c519cfb567685523a7aea3afd2396db2 727 Gene3D G3DSA:3.55.50.30 275 346 1.2E-9 T 14-10-2018 C3Y93_08270 c519cfb567685523a7aea3afd2396db2 727 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 665 698 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 C3Y93_08270 c519cfb567685523a7aea3afd2396db2 727 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 276 720 3.0E-165 T 14-10-2018 IPR013355 Type IV pilus secretin PilQ C3Y93_08270 c519cfb567685523a7aea3afd2396db2 727 Pfam PF11741 AMIN domain 55 132 4.1E-6 T 14-10-2018 IPR021731 AMIN domain C3Y93_08270 c519cfb567685523a7aea3afd2396db2 727 Gene3D G3DSA:2.60.40.3470 137 261 1.0E-29 T 14-10-2018 C3Y93_08270 c519cfb567685523a7aea3afd2396db2 727 Pfam PF07660 Secretin and TonB N terminus short domain 306 348 2.0E-9 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 C3Y93_08270 c519cfb567685523a7aea3afd2396db2 727 Gene3D G3DSA:3.30.1370.120 348 461 9.6E-27 T 14-10-2018 IPR038591 NolW-like superfamily C3Y93_08270 c519cfb567685523a7aea3afd2396db2 727 PRINTS PR00811 Bacterial general secretion pathway protein D signature 684 702 1.9E-20 T 14-10-2018 IPR001775 GspD/PilQ family C3Y93_08270 c519cfb567685523a7aea3afd2396db2 727 PRINTS PR00811 Bacterial general secretion pathway protein D signature 557 581 1.9E-20 T 14-10-2018 IPR001775 GspD/PilQ family C3Y93_08270 c519cfb567685523a7aea3afd2396db2 727 PRINTS PR00811 Bacterial general secretion pathway protein D signature 460 470 1.9E-20 T 14-10-2018 IPR001775 GspD/PilQ family C3Y93_08270 c519cfb567685523a7aea3afd2396db2 727 PRINTS PR00811 Bacterial general secretion pathway protein D signature 707 721 1.9E-20 T 14-10-2018 IPR001775 GspD/PilQ family C3Y93_08270 c519cfb567685523a7aea3afd2396db2 727 Pfam PF03958 Bacterial type II/III secretion system short domain 375 460 5.9E-15 T 14-10-2018 IPR005644 NolW-like C3Y93_08270 c519cfb567685523a7aea3afd2396db2 727 Pfam PF00263 Bacterial type II and III secretion system protein 561 719 1.1E-49 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 C3Y93_08145 1aa42382dc1d32f55a63ca55e132dec1 316 Gene3D G3DSA:3.40.1010.20 6 283 3.0E-114 T 14-10-2018 C3Y93_08145 1aa42382dc1d32f55a63ca55e132dec1 316 Gene3D G3DSA:3.40.50.11270 12 96 3.0E-114 T 14-10-2018 C3Y93_08145 1aa42382dc1d32f55a63ca55e132dec1 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 38.872 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 C3Y93_08145 1aa42382dc1d32f55a63ca55e132dec1 316 Pfam PF02401 LytB protein 3 283 1.9E-96 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 C3Y93_08145 1aa42382dc1d32f55a63ca55e132dec1 316 Gene3D G3DSA:3.40.1010.20 97 197 3.0E-114 T 14-10-2018 C3Y93_08145 1aa42382dc1d32f55a63ca55e132dec1 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 5.6E-103 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 300 5.8E-48 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.9E-38 T 14-10-2018 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 1.9E-38 T 14-10-2018 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.9E-38 T 14-10-2018 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 1.9E-38 T 14-10-2018 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.9E-38 T 14-10-2018 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 Gene3D G3DSA:3.50.50.60 117 243 1.0E-120 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 SUPERFAMILY SSF51905 2 312 1.73E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 312 6.8E-120 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 Gene3D G3DSA:3.50.50.60 9 311 1.0E-120 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 5.2E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 5.2E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 5.2E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 293 312 5.2E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 5.2E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 5.2E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 5.2E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 5.2E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_06290 c4f3aea1abee1d5dfcb2cbdfbdc0d27c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 5.2E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_00070 1926b8ffd01828212d0e6309f233bc09 149 Gene3D G3DSA:3.30.420.270 63 138 1.4E-9 T 14-10-2018 C3Y93_00070 1926b8ffd01828212d0e6309f233bc09 149 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 10 146 27.181 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 C3Y93_00070 1926b8ffd01828212d0e6309f233bc09 149 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 147 1.7E-25 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 C3Y93_00070 1926b8ffd01828212d0e6309f233bc09 149 TIGRFAM TIGR02801 tolR: protein TolR 17 146 1.6E-41 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 Gene3D G3DSA:3.40.50.300 4 206 8.2E-62 T 14-10-2018 C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 Gene3D G3DSA:2.40.30.10 207 307 9.6E-36 T 14-10-2018 C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 607 1.2E-283 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 SUPERFAMILY SSF52540 4 227 2.26E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 Pfam PF00679 Elongation factor G C-terminus 404 485 5.4E-24 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 Gene3D G3DSA:3.30.70.870 314 598 4.7E-133 T 14-10-2018 C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 SUPERFAMILY SSF54980 406 521 7.67E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 Pfam PF03144 Elongation factor Tu domain 2 227 297 1.2E-7 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 SUPERFAMILY SSF50447 159 307 2.65E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 SMART SM00838 406 491 0.0041 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 Pfam PF00009 Elongation factor Tu GTP binding domain 6 202 1.1E-50 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 Gene3D G3DSA:3.30.70.240 397 490 4.7E-133 T 14-10-2018 C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 147 1.1E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 PRINTS PR00315 GTP-binding elongation factor signature 53 61 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 SUPERFAMILY SSF54980 310 395 2.09E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like C3Y93_12635 f6aeaf083ce2bc667bc1c9ebabad5bf4 612 Gene3D G3DSA:2.40.50.250 491 607 4.7E-133 T 14-10-2018 C3Y93_11250 af08c380e9db66cae2188225e5a78579 599 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 389 531 8.0E-50 T 14-10-2018 IPR001162 UvrC family homology region C3Y93_11250 af08c380e9db66cae2188225e5a78579 599 Hamap MF_00203 UvrABC system protein C [uvrC]. 6 596 26.598 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 C3Y93_11250 af08c380e9db66cae2188225e5a78579 599 Gene3D G3DSA:1.10.150.20 544 599 4.6E-18 T 14-10-2018 C3Y93_11250 af08c380e9db66cae2188225e5a78579 599 SUPERFAMILY SSF46600 193 246 7.19E-12 T 14-10-2018 IPR036876 UVR domain superfamily C3Y93_11250 af08c380e9db66cae2188225e5a78579 599 Pfam PF02151 UvrB/uvrC motif 208 240 7.4E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 C3Y93_11250 af08c380e9db66cae2188225e5a78579 599 Pfam PF01541 GIY-YIG catalytic domain 21 95 2.1E-8 T 14-10-2018 IPR000305 GIY-YIG endonuclease C3Y93_11250 af08c380e9db66cae2188225e5a78579 599 Gene3D G3DSA:3.40.1440.10 6 104 2.4E-31 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 C3Y93_11250 af08c380e9db66cae2188225e5a78579 599 SUPERFAMILY SSF47781 510 598 7.94E-23 T 14-10-2018 IPR010994 RuvA domain 2-like C3Y93_11250 af08c380e9db66cae2188225e5a78579 599 SMART SM00465 19 100 1.5E-22 T 14-10-2018 IPR000305 GIY-YIG endonuclease C3Y93_11250 af08c380e9db66cae2188225e5a78579 599 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 11 578 3.2E-176 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 C3Y93_11250 af08c380e9db66cae2188225e5a78579 599 SUPERFAMILY SSF82771 19 102 2.75E-22 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 C3Y93_11250 af08c380e9db66cae2188225e5a78579 599 Gene3D G3DSA:3.30.420.340 377 541 6.7E-54 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily C3Y93_06705 d79acc1d38341e2b36852c1398d0a871 182 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 94 179 4.7E-36 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 C3Y93_06705 d79acc1d38341e2b36852c1398d0a871 182 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 18 181 4.3E-65 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C3Y93_06705 d79acc1d38341e2b36852c1398d0a871 182 Gene3D G3DSA:3.30.110.10 87 182 3.1E-36 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 C3Y93_06705 d79acc1d38341e2b36852c1398d0a871 182 SUPERFAMILY SSF55200 94 182 6.02E-32 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 C3Y93_06705 d79acc1d38341e2b36852c1398d0a871 182 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 18 87 3.5E-28 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C3Y93_06705 d79acc1d38341e2b36852c1398d0a871 182 Gene3D G3DSA:3.10.20.80 13 86 1.7E-28 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C3Y93_06705 d79acc1d38341e2b36852c1398d0a871 182 SUPERFAMILY SSF54364 16 89 3.01E-27 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C3Y93_06705 d79acc1d38341e2b36852c1398d0a871 182 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 12 181 28.551 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PIRSF PIRSF000350 3 468 5.1E-68 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 3.2E-52 T 14-10-2018 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 186 211 3.2E-52 T 14-10-2018 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 3.2E-52 T 14-10-2018 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 16 38 3.2E-52 T 14-10-2018 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 159 3.2E-52 T 14-10-2018 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 3.2E-52 T 14-10-2018 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 49 64 3.2E-52 T 14-10-2018 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 3.2E-52 T 14-10-2018 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 3.2E-52 T 14-10-2018 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 334 2.9E-57 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 SUPERFAMILY SSF51905 14 327 1.12E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 Gene3D G3DSA:3.50.50.60 159 277 1.9E-87 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 461 1.3E-27 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 Gene3D G3DSA:3.50.50.60 15 337 1.9E-87 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 SUPERFAMILY SSF55424 352 468 3.61E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 Gene3D G3DSA:3.30.390.30 352 470 9.7E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 3.3E-29 T 14-10-2018 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 3.3E-29 T 14-10-2018 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 3.3E-29 T 14-10-2018 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 204 3.3E-29 T 14-10-2018 C3Y93_04985 f758b1f28e1818de8aa8c36dc8d5c3e4 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 3.3E-29 T 14-10-2018 C3Y93_12590 4a34831090f6f461b3fe563eec0e9e2d 547 SUPERFAMILY SSF56014 120 277 2.49E-42 T 14-10-2018 C3Y93_12590 4a34831090f6f461b3fe563eec0e9e2d 547 Gene3D G3DSA:3.90.480.10 53 387 2.9E-74 T 14-10-2018 C3Y93_12590 4a34831090f6f461b3fe563eec0e9e2d 547 Gene3D G3DSA:3.30.413.10 406 547 4.3E-30 T 14-10-2018 C3Y93_12590 4a34831090f6f461b3fe563eec0e9e2d 547 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 408 543 3.2E-9 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3Y93_12590 4a34831090f6f461b3fe563eec0e9e2d 547 SUPERFAMILY SSF56014 406 545 6.02E-38 T 14-10-2018 C3Y93_12590 4a34831090f6f461b3fe563eec0e9e2d 547 SUPERFAMILY SSF55124 1 125 3.76E-28 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3Y93_12590 4a34831090f6f461b3fe563eec0e9e2d 547 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 331 394 6.5E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3Y93_12590 4a34831090f6f461b3fe563eec0e9e2d 547 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 109 6.1E-16 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3Y93_12590 4a34831090f6f461b3fe563eec0e9e2d 547 Gene3D G3DSA:3.30.413.10 119 315 2.9E-74 T 14-10-2018 C3Y93_12590 4a34831090f6f461b3fe563eec0e9e2d 547 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 8.9E-40 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3Y93_12590 4a34831090f6f461b3fe563eec0e9e2d 547 SUPERFAMILY SSF55124 253 419 4.42E-22 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C3Y93_12260 bb2413b04affaf91d39fda61c674cef7 104 SMART SM00450 2 99 1.4E-9 T 14-10-2018 IPR001763 Rhodanese-like domain C3Y93_12260 bb2413b04affaf91d39fda61c674cef7 104 Gene3D G3DSA:3.40.250.10 11 104 5.4E-18 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3Y93_12260 bb2413b04affaf91d39fda61c674cef7 104 SUPERFAMILY SSF52821 14 103 3.93E-18 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3Y93_12260 bb2413b04affaf91d39fda61c674cef7 104 Pfam PF00581 Rhodanese-like domain 17 91 1.4E-8 T 14-10-2018 IPR001763 Rhodanese-like domain C3Y93_12265 cd8a3e219f3c239de8798d24afe6e99b 635 Gene3D G3DSA:3.30.9.10 349 556 3.6E-74 T 14-10-2018 C3Y93_12265 cd8a3e219f3c239de8798d24afe6e99b 635 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 6 620 21.372 T 14-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 C3Y93_12265 cd8a3e219f3c239de8798d24afe6e99b 635 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 271 572 3.7E-64 T 14-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 C3Y93_12265 cd8a3e219f3c239de8798d24afe6e99b 635 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 240 9.0E-37 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 C3Y93_12265 cd8a3e219f3c239de8798d24afe6e99b 635 SUPERFAMILY SSF54373 465 548 4.05E-5 T 14-10-2018 C3Y93_12265 cd8a3e219f3c239de8798d24afe6e99b 635 SUPERFAMILY SSF51971 267 599 2.0E-21 T 14-10-2018 C3Y93_12265 cd8a3e219f3c239de8798d24afe6e99b 635 Gene3D G3DSA:3.40.50.150 9 251 4.4E-88 T 14-10-2018 C3Y93_12265 cd8a3e219f3c239de8798d24afe6e99b 635 Pfam PF01266 FAD dependent oxidoreductase 271 595 5.2E-27 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 C3Y93_12265 cd8a3e219f3c239de8798d24afe6e99b 635 Gene3D G3DSA:3.50.50.60 272 618 3.6E-74 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_13375 e62d4fed9ef7a9e070a539db6dfc8d73 107 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 87 4.0E-21 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 C3Y93_13375 e62d4fed9ef7a9e070a539db6dfc8d73 107 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 12 86 2.0E-27 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 C3Y93_13375 e62d4fed9ef7a9e070a539db6dfc8d73 107 Gene3D G3DSA:3.30.110.60 2 105 2.3E-31 T 14-10-2018 IPR035920 YhbY-like superfamily C3Y93_13375 e62d4fed9ef7a9e070a539db6dfc8d73 107 SUPERFAMILY SSF75471 4 96 3.53E-27 T 14-10-2018 IPR035920 YhbY-like superfamily C3Y93_13375 e62d4fed9ef7a9e070a539db6dfc8d73 107 SMART SM01103 4 87 3.5E-39 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 C3Y93_13375 e62d4fed9ef7a9e070a539db6dfc8d73 107 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 5 95 7.0E-24 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 PRINTS PR00943 Copper-transporting ATPase signature 428 442 4.7E-12 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 PRINTS PR00943 Copper-transporting ATPase signature 95 109 4.7E-12 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 PRINTS PR00943 Copper-transporting ATPase signature 223 242 4.7E-12 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 PRINTS PR00943 Copper-transporting ATPase signature 779 793 4.7E-12 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 PRINTS PR00943 Copper-transporting ATPase signature 683 700 4.7E-12 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 PRINTS PR00943 Copper-transporting ATPase signature 123 143 4.7E-12 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 PRINTS PR00943 Copper-transporting ATPase signature 275 294 4.7E-12 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 Pfam PF00403 Heavy-metal-associated domain 83 142 3.6E-15 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 Pfam PF00403 Heavy-metal-associated domain 14 74 1.5E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 ProSitePatterns PS01047 Heavy-metal-associated domain. 85 114 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 Pfam PF00122 E1-E2 ATPase 306 486 6.3E-56 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 ProSitePatterns PS01047 Heavy-metal-associated domain. 17 46 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 81 143 2.7E-12 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 12 76 4.3E-11 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 Gene3D G3DSA:3.30.70.100 80 144 1.5E-22 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 Gene3D G3DSA:3.40.50.1000 488 758 2.5E-92 T 14-10-2018 IPR023214 HAD superfamily C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 Pfam PF00702 haloacid dehalogenase-like hydrolase 503 720 1.9E-43 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 238 815 8.5E-188 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 9.5E-29 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 642 9.5E-29 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 729 741 9.5E-29 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 663 9.5E-29 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 706 725 9.5E-29 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 355 369 9.5E-29 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 SUPERFAMILY SSF81665 267 784 3.27E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 220 816 5.7E-180 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 Gene3D G3DSA:3.30.70.100 13 78 6.1E-21 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 SUPERFAMILY SSF55008 9 77 1.7E-19 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 Gene3D G3DSA:2.70.150.20 298 410 1.5E-39 T 14-10-2018 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 SUPERFAMILY SSF56784 505 813 8.25E-62 T 14-10-2018 IPR036412 HAD-like superfamily C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 277 783 2.7E-93 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 SUPERFAMILY SSF81653 309 405 9.68E-28 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 SUPERFAMILY SSF55008 79 149 2.88E-21 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C3Y93_05325 7562feb8478c6c66504f2736d41dd994 823 Gene3D G3DSA:3.40.1110.10 518 638 2.5E-92 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 220 234 1.4E-48 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 254 281 1.4E-48 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 416 435 1.4E-48 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 188 202 1.4E-48 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 156 176 1.4E-48 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 SMART SM00382 155 285 9.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 SUPERFAMILY SSF52540 122 335 2.19E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 Gene3D G3DSA:1.10.8.60 289 359 1.6E-21 T 14-10-2018 C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 SUPERFAMILY SSF48295 355 457 4.19E-33 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 Gene3D G3DSA:3.30.300.180 1 116 1.2E-19 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 SMART SM00760 366 435 3.4E-38 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 368 435 8.1E-28 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 Gene3D G3DSA:1.10.1750.10 365 458 9.0E-32 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 Pfam PF00308 Bacterial dnaA protein 122 340 1.6E-83 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 Pfam PF11638 DnaA N-terminal domain 2 60 5.5E-13 T 14-10-2018 IPR024633 DnaA N-terminal domain C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 457 29.534 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 3 455 2.2E-155 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 ProSitePatterns PS01008 DnaA protein signature. 416 435 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 C3Y93_09765 27c585577a779c2a7533b93bb96338e8 458 Gene3D G3DSA:3.40.50.300 120 288 3.9E-45 T 14-10-2018 C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 Gene3D G3DSA:3.30.390.30 319 408 7.8E-19 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 5.6E-14 T 14-10-2018 C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 5.6E-14 T 14-10-2018 C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.6E-14 T 14-10-2018 C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 5.6E-14 T 14-10-2018 C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 Pfam PF14759 Reductase C-terminal 319 407 1.9E-16 T 14-10-2018 IPR028202 Reductase, C-terminal C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 299 4.9E-56 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 Gene3D G3DSA:3.50.50.60 114 238 1.0E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 SUPERFAMILY SSF55424 313 407 6.59E-18 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 Gene3D G3DSA:3.50.50.60 7 300 1.0E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 SUPERFAMILY SSF51905 6 334 1.71E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 6.4E-25 T 14-10-2018 C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 6.4E-25 T 14-10-2018 C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 6.4E-25 T 14-10-2018 C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 6.4E-25 T 14-10-2018 C3Y93_11820 51c76279497a6ca89d43c4f98ef31823 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.4E-25 T 14-10-2018 C3Y93_03225 ef7693c3da022655c6ecd82dae868d34 446 Pfam PF02386 Cation transport protein 31 432 1.7E-54 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 C3Y93_03225 ef7693c3da022655c6ecd82dae868d34 446 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 34 418 5.7E-101 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 620 6.7E-287 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 Gene3D G3DSA:3.40.50.670 389 619 7.9E-89 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 Pfam PF01751 Toprim domain 413 512 2.8E-12 T 14-10-2018 IPR006171 TOPRIM domain C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 Pfam PF00204 DNA gyrase B 218 385 1.4E-40 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.5E-93 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.5E-93 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR01098 Topoisomerase IV subunit B signature 134 148 1.5E-93 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR01098 Topoisomerase IV subunit B signature 580 594 1.5E-93 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.5E-93 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.5E-93 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.5E-93 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.5E-93 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.5E-93 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.5E-93 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.5E-93 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.5E-93 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.5E-93 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR01098 Topoisomerase IV subunit B signature 25 38 1.5E-93 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 154 2.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 Gene3D G3DSA:3.30.565.10 1 215 8.3E-71 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 SUPERFAMILY SSF55874 3 215 2.49E-60 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 554 616 2.8E-22 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 SUPERFAMILY SSF56719 388 617 2.88E-74 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 SMART SM00387 26 173 3.2E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 SUPERFAMILY SSF54211 217 382 2.47E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 1 624 46.057 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 9.2E-60 T 14-10-2018 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR00418 DNA topoisomerase II family signature 558 574 9.2E-60 T 14-10-2018 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 9.2E-60 T 14-10-2018 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 9.2E-60 T 14-10-2018 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR00418 DNA topoisomerase II family signature 30 45 9.2E-60 T 14-10-2018 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR00418 DNA topoisomerase II family signature 108 122 9.2E-60 T 14-10-2018 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR00418 DNA topoisomerase II family signature 65 78 9.2E-60 T 14-10-2018 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 9.2E-60 T 14-10-2018 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 9.2E-60 T 14-10-2018 C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 Gene3D G3DSA:3.30.230.10 216 388 1.6E-52 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3Y93_09340 8dbb8b2192e336c8e5d3a0757d83b31a 626 SMART SM00433 33 620 4.3E-197 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3Y93_13075 e3a5805d106ce2c5537c6dafaa7ed695 218 Gene3D G3DSA:3.30.930.10 6 207 8.5E-57 T 14-10-2018 C3Y93_13075 e3a5805d106ce2c5537c6dafaa7ed695 218 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 75 90 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 C3Y93_13075 e3a5805d106ce2c5537c6dafaa7ed695 218 Pfam PF03099 Biotin/lipoate A/B protein ligase family 65 163 6.4E-10 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 C3Y93_13075 e3a5805d106ce2c5537c6dafaa7ed695 218 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 79 132 3.0E-21 T 14-10-2018 C3Y93_13075 e3a5805d106ce2c5537c6dafaa7ed695 218 Hamap MF_00013 Octanoyltransferase [lipB]. 8 211 33.856 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3Y93_13075 e3a5805d106ce2c5537c6dafaa7ed695 218 PIRSF PIRSF016262 5 215 1.1E-58 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3Y93_13075 e3a5805d106ce2c5537c6dafaa7ed695 218 SUPERFAMILY SSF55681 12 205 2.32E-62 T 14-10-2018 C3Y93_13075 e3a5805d106ce2c5537c6dafaa7ed695 218 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 31 203 1.1E-57 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3Y93_10180 26fd929ad0920272dca7e2adb9e15d5b 332 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 321 4.7E-166 T 14-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 C3Y93_10180 26fd929ad0920272dca7e2adb9e15d5b 332 Pfam PF02719 Polysaccharide biosynthesis protein 7 278 1.1E-97 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain C3Y93_10180 26fd929ad0920272dca7e2adb9e15d5b 332 Gene3D G3DSA:3.40.50.720 4 305 8.3E-128 T 14-10-2018 C3Y93_10180 26fd929ad0920272dca7e2adb9e15d5b 332 Gene3D G3DSA:3.90.25.30 168 309 8.3E-128 T 14-10-2018 C3Y93_10180 26fd929ad0920272dca7e2adb9e15d5b 332 SUPERFAMILY SSF51735 1 265 1.1E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_05535 54cf8668ee4e7d7f6b2b4f22d1f6256a 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 91 1.8E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C3Y93_05535 54cf8668ee4e7d7f6b2b4f22d1f6256a 330 SUPERFAMILY SSF51735 116 292 9.55E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_05535 54cf8668ee4e7d7f6b2b4f22d1f6256a 330 Pfam PF00107 Zinc-binding dehydrogenase 156 277 4.7E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C3Y93_05535 54cf8668ee4e7d7f6b2b4f22d1f6256a 330 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 6 328 3.3E-142 T 14-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 C3Y93_05535 54cf8668ee4e7d7f6b2b4f22d1f6256a 330 Gene3D G3DSA:3.90.180.10 18 327 9.0E-105 T 14-10-2018 C3Y93_05535 54cf8668ee4e7d7f6b2b4f22d1f6256a 330 SUPERFAMILY SSF50129 6 145 1.32E-41 T 14-10-2018 IPR011032 GroES-like superfamily C3Y93_05535 54cf8668ee4e7d7f6b2b4f22d1f6256a 330 SMART SM00829 15 327 9.8E-53 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C3Y93_05535 54cf8668ee4e7d7f6b2b4f22d1f6256a 330 Gene3D G3DSA:3.40.50.720 125 266 9.0E-105 T 14-10-2018 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 SUPERFAMILY SSF64484 11 1361 0.0 T 14-10-2018 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Pfam PF04565 RNA polymerase Rpb2, domain 3 522 589 3.5E-30 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Gene3D G3DSA:3.90.1110.10 320 450 1.7E-32 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Gene3D G3DSA:2.40.270.10 800 841 5.3E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 351 463 1.2E-14 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 153 224 1.1E-6 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Pfam PF04563 RNA polymerase beta subunit 26 508 1.8E-40 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1361 12.272 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1358 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1084 1096 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Gene3D G3DSA:2.40.50.150 842 964 3.5E-44 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Pfam PF04560 RNA polymerase Rpb2, domain 7 1285 1359 4.8E-26 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Gene3D G3DSA:2.40.50.100 723 797 2.8E-31 T 14-10-2018 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Gene3D G3DSA:3.90.1100.10 451 633 3.5E-69 T 14-10-2018 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Gene3D G3DSA:3.90.1100.10 18 159 9.0E-52 T 14-10-2018 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Pfam PF10385 RNA polymerase beta subunit external 1 domain 600 665 2.0E-22 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Pfam PF00562 RNA polymerase Rpb2, domain 6 726 1283 1.3E-158 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Gene3D G3DSA:2.40.270.10 1054 1261 8.2E-89 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Gene3D G3DSA:3.90.1800.10 1271 1324 7.8E-11 T 14-10-2018 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Gene3D G3DSA:3.90.1110.10 160 257 4.4E-29 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_11135 f89638fe3b9b0f81d3fa6f61a97e183a 1362 Gene3D G3DSA:3.90.1100.10 657 722 2.4E-20 T 14-10-2018 C3Y93_06870 a1b454b098e0affc8291468247902a3f 308 Gene3D G3DSA:3.20.10.10 134 308 3.3E-53 T 14-10-2018 C3Y93_06870 a1b454b098e0affc8291468247902a3f 308 SUPERFAMILY SSF56752 2 304 8.37E-103 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 C3Y93_06870 a1b454b098e0affc8291468247902a3f 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 307 2.4E-128 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 C3Y93_06870 a1b454b098e0affc8291468247902a3f 308 Gene3D G3DSA:3.30.470.10 7 133 1.2E-38 T 14-10-2018 C3Y93_06870 a1b454b098e0affc8291468247902a3f 308 Pfam PF01063 Amino-transferase class IV 36 268 6.4E-54 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 C3Y93_04020 1caf71bc010777c448da5efa910c162a 958 Pfam PF04851 Type III restriction enzyme, res subunit 239 403 4.4E-38 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 C3Y93_04020 1caf71bc010777c448da5efa910c162a 958 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 6 694 8.2E-150 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 C3Y93_04020 1caf71bc010777c448da5efa910c162a 958 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 189 2.6E-32 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 C3Y93_04020 1caf71bc010777c448da5efa910c162a 958 Gene3D G3DSA:3.90.640.50 29 96 3.7E-77 T 14-10-2018 C3Y93_04020 1caf71bc010777c448da5efa910c162a 958 SUPERFAMILY SSF52540 240 408 1.82E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_04020 1caf71bc010777c448da5efa910c162a 958 Gene3D G3DSA:3.90.1570.50 4 231 3.7E-77 T 14-10-2018 C3Y93_04020 1caf71bc010777c448da5efa910c162a 958 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 698 954 1.4E-49 T 14-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal C3Y93_04020 1caf71bc010777c448da5efa910c162a 958 Gene3D G3DSA:3.40.50.300 240 429 9.2E-67 T 14-10-2018 C3Y93_04020 1caf71bc010777c448da5efa910c162a 958 Gene3D G3DSA:3.40.50.300 430 701 1.1E-94 T 14-10-2018 C3Y93_04020 1caf71bc010777c448da5efa910c162a 958 Gene3D G3DSA:1.20.58.2040 702 809 1.5E-8 T 14-10-2018 C3Y93_04020 1caf71bc010777c448da5efa910c162a 958 SMART SM00487 237 432 1.9E-19 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3Y93_04020 1caf71bc010777c448da5efa910c162a 958 SUPERFAMILY SSF52540 260 673 1.26E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_04955 d73bad8a8bbe43f8410619f899695ce0 291 SUPERFAMILY SSF54713 57 269 2.21E-43 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 C3Y93_04955 d73bad8a8bbe43f8410619f899695ce0 291 Gene3D G3DSA:3.30.479.20 57 148 2.1E-25 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 C3Y93_04955 d73bad8a8bbe43f8410619f899695ce0 291 Hamap MF_00050 Elongation factor Ts [tsf]. 1 288 73.011 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3Y93_04955 d73bad8a8bbe43f8410619f899695ce0 291 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3Y93_04955 d73bad8a8bbe43f8410619f899695ce0 291 Gene3D G3DSA:3.30.479.20 153 268 1.4E-36 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 C3Y93_04955 d73bad8a8bbe43f8410619f899695ce0 291 Gene3D G3DSA:1.10.8.10 1 56 1.8E-24 T 14-10-2018 C3Y93_04955 d73bad8a8bbe43f8410619f899695ce0 291 Gene3D G3DSA:1.10.286.20 188 234 1.4E-36 T 14-10-2018 C3Y93_04955 d73bad8a8bbe43f8410619f899695ce0 291 SUPERFAMILY SSF46934 4 54 1.15E-17 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 C3Y93_04955 d73bad8a8bbe43f8410619f899695ce0 291 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3Y93_04955 d73bad8a8bbe43f8410619f899695ce0 291 Pfam PF00889 Elongation factor TS 71 269 2.6E-61 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 C3Y93_04955 d73bad8a8bbe43f8410619f899695ce0 291 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 286 6.2E-94 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C3Y93_12575 3506d8a7a56247606e7d7077e74fff96 401 Pfam PF02803 Thiolase, C-terminal domain 278 400 1.0E-46 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 C3Y93_12575 3506d8a7a56247606e7d7077e74fff96 401 Gene3D G3DSA:3.40.47.10 125 396 3.6E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_12575 3506d8a7a56247606e7d7077e74fff96 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 C3Y93_12575 3506d8a7a56247606e7d7077e74fff96 401 SUPERFAMILY SSF53901 279 400 8.52E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_12575 3506d8a7a56247606e7d7077e74fff96 401 Gene3D G3DSA:3.40.47.10 6 298 3.6E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_12575 3506d8a7a56247606e7d7077e74fff96 401 PIRSF PIRSF000429 1 401 6.6E-112 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3Y93_12575 3506d8a7a56247606e7d7077e74fff96 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 3.8E-133 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3Y93_12575 3506d8a7a56247606e7d7077e74fff96 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 C3Y93_12575 3506d8a7a56247606e7d7077e74fff96 401 SUPERFAMILY SSF53901 3 278 2.88E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_12575 3506d8a7a56247606e7d7077e74fff96 401 Pfam PF00108 Thiolase, N-terminal domain 5 271 1.6E-50 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 C3Y93_12575 3506d8a7a56247606e7d7077e74fff96 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 C3Y93_01445 7a372a4a19f23b0c1b999c427dbc94f2 201 SMART SM00855 3 162 1.6E-11 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 C3Y93_01445 7a372a4a19f23b0c1b999c427dbc94f2 201 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 193 2.8E-37 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 C3Y93_01445 7a372a4a19f23b0c1b999c427dbc94f2 201 PIRSF PIRSF000709 4 198 1.7E-9 T 14-10-2018 C3Y93_01445 7a372a4a19f23b0c1b999c427dbc94f2 201 Gene3D G3DSA:3.40.50.1240 3 198 3.3E-40 T 14-10-2018 IPR029033 Histidine phosphatase superfamily C3Y93_01445 7a372a4a19f23b0c1b999c427dbc94f2 201 SUPERFAMILY SSF53254 1 194 1.05E-42 T 14-10-2018 IPR029033 Histidine phosphatase superfamily C3Y93_01325 b1ec7131db47afa73cd92ff5c96b60f6 440 SMART SM00388 220 282 5.1E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_01325 b1ec7131db47afa73cd92ff5c96b60f6 440 Gene3D G3DSA:3.30.565.10 279 421 6.3E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_01325 b1ec7131db47afa73cd92ff5c96b60f6 440 SUPERFAMILY SSF55874 286 415 7.73E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_01325 b1ec7131db47afa73cd92ff5c96b60f6 440 SUPERFAMILY SSF47384 203 280 6.67E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3Y93_01325 b1ec7131db47afa73cd92ff5c96b60f6 440 Gene3D G3DSA:1.10.287.130 165 278 1.0E-18 T 14-10-2018 C3Y93_01325 b1ec7131db47afa73cd92ff5c96b60f6 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 412 2.0E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_01325 b1ec7131db47afa73cd92ff5c96b60f6 440 SMART SM00387 326 431 6.0E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_01325 b1ec7131db47afa73cd92ff5c96b60f6 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 280 5.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_09045 48276834cc35dd677f47db50b8cf7497 118 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 105 5.5E-24 T 14-10-2018 IPR009241 Toxin HigB-like C3Y93_10700 2ce892fabb7578c780c4a7fa24d603db 123 SUPERFAMILY SSF55298 11 119 4.08E-28 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 C3Y93_10700 2ce892fabb7578c780c4a7fa24d603db 123 Gene3D G3DSA:3.30.1330.40 1 121 2.5E-36 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 C3Y93_10700 2ce892fabb7578c780c4a7fa24d603db 123 Pfam PF01042 Endoribonuclease L-PSP 7 115 3.9E-24 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 C3Y93_12620 6c154fdede375f1f8f44358f67891cc4 487 Gene3D G3DSA:1.20.1740.10 8 481 2.6E-62 T 14-10-2018 C3Y93_12620 6c154fdede375f1f8f44358f67891cc4 487 Pfam PF00324 Amino acid permease 18 470 1.3E-130 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 C3Y93_12620 6c154fdede375f1f8f44358f67891cc4 487 ProSitePatterns PS00218 Amino acid permeases signature. 43 74 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 C3Y93_12620 6c154fdede375f1f8f44358f67891cc4 487 PIRSF PIRSF006060 1 485 2.0E-84 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 C3Y93_01635 f223f00b9b217deb76a7853cd0b4621f 337 SUPERFAMILY SSF56112 7 307 4.16E-43 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3Y93_01635 f223f00b9b217deb76a7853cd0b4621f 337 Gene3D G3DSA:3.90.1200.10 93 332 1.5E-65 T 14-10-2018 C3Y93_01635 f223f00b9b217deb76a7853cd0b4621f 337 Gene3D G3DSA:3.30.200.20 1 92 2.8E-24 T 14-10-2018 C3Y93_01635 f223f00b9b217deb76a7853cd0b4621f 337 Pfam PF01636 Phosphotransferase enzyme family 24 238 5.3E-24 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase C3Y93_13020 975d6129012cd0abd5f3f9c13d78095e 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_13020 975d6129012cd0abd5f3f9c13d78095e 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.6E-40 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_13020 975d6129012cd0abd5f3f9c13d78095e 103 SUPERFAMILY SSF141091 1 101 2.62E-39 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_13020 975d6129012cd0abd5f3f9c13d78095e 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.15 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_13020 975d6129012cd0abd5f3f9c13d78095e 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 4.2E-42 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 ProSitePatterns PS00163 Fumarate lyases signature. 273 282 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 PRINTS PR00145 Argininosuccinate lyase family signature 140 160 6.8E-68 T 14-10-2018 C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 PRINTS PR00145 Argininosuccinate lyase family signature 191 207 6.8E-68 T 14-10-2018 C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 PRINTS PR00145 Argininosuccinate lyase family signature 308 327 6.8E-68 T 14-10-2018 C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 PRINTS PR00145 Argininosuccinate lyase family signature 229 253 6.8E-68 T 14-10-2018 C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 PRINTS PR00145 Argininosuccinate lyase family signature 273 289 6.8E-68 T 14-10-2018 C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 PRINTS PR00145 Argininosuccinate lyase family signature 99 121 6.8E-68 T 14-10-2018 C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 TIGRFAM TIGR00838 argH: argininosuccinate lyase 1 454 4.5E-195 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 Hamap MF_00006 Argininosuccinate lyase [argH]. 1 452 43.409 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 Gene3D G3DSA:1.20.200.10 117 447 4.8E-193 T 14-10-2018 C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 SUPERFAMILY SSF48557 1 454 1.88E-154 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 Pfam PF00206 Lyase 4 298 4.7E-79 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 Gene3D G3DSA:1.10.275.10 23 227 4.8E-193 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 Pfam PF14698 Argininosuccinate lyase C-terminal 361 430 2.0E-25 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 Gene3D G3DSA:1.10.40.30 358 431 4.8E-193 T 14-10-2018 C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 PRINTS PR00149 Fumarate lyase superfamily signature 229 256 1.1E-30 T 14-10-2018 IPR000362 Fumarate lyase family C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 PRINTS PR00149 Fumarate lyase superfamily signature 145 163 1.1E-30 T 14-10-2018 IPR000362 Fumarate lyase family C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 PRINTS PR00149 Fumarate lyase superfamily signature 100 118 1.1E-30 T 14-10-2018 IPR000362 Fumarate lyase family C3Y93_11000 5c3e6a158866d0098d673888971456b4 459 PRINTS PR00149 Fumarate lyase superfamily signature 273 289 1.1E-30 T 14-10-2018 IPR000362 Fumarate lyase family C3Y93_11460 a988ca359a05f70ddd2f2ee3134a2052 314 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 88 313 6.2E-83 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 C3Y93_11460 a988ca359a05f70ddd2f2ee3134a2052 314 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 79 313 38.662 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 C3Y93_11460 a988ca359a05f70ddd2f2ee3134a2052 314 SUPERFAMILY SSF53335 83 311 4.96E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_11460 a988ca359a05f70ddd2f2ee3134a2052 314 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 99 114 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 C3Y93_11460 a988ca359a05f70ddd2f2ee3134a2052 314 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 221 235 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 C3Y93_11460 a988ca359a05f70ddd2f2ee3134a2052 314 Gene3D G3DSA:3.40.50.150 94 314 5.4E-75 T 14-10-2018 C3Y93_11460 a988ca359a05f70ddd2f2ee3134a2052 314 Pfam PF01209 ubiE/COQ5 methyltransferase family 84 313 7.4E-99 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 C3Y93_13040 f712eb45e3b8a27028f693d5f8a34359 265 Gene3D G3DSA:3.30.565.40 51 169 1.8E-11 T 14-10-2018 C3Y93_13040 f712eb45e3b8a27028f693d5f8a34359 265 Pfam PF11738 Protein of unknown function (DUF3298) 181 244 1.2E-10 T 14-10-2018 IPR021729 Domain of unknown function DUF3298 C3Y93_13040 f712eb45e3b8a27028f693d5f8a34359 265 Gene3D G3DSA:3.90.640.20 170 259 3.8E-18 T 14-10-2018 IPR037126 PdaC/RsiV-like superfamily C3Y93_11615 fa7f4b74e390061235b6d1a43d1cef95 337 Gene3D G3DSA:3.40.50.1400 171 309 2.7E-91 T 14-10-2018 C3Y93_11615 fa7f4b74e390061235b6d1a43d1cef95 337 Hamap MF_00323 Ferrochelatase [hemH]. 7 328 34.994 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 C3Y93_11615 fa7f4b74e390061235b6d1a43d1cef95 337 SUPERFAMILY SSF53800 6 331 4.25E-93 T 14-10-2018 C3Y93_11615 fa7f4b74e390061235b6d1a43d1cef95 337 Pfam PF00762 Ferrochelatase 8 327 6.3E-100 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 C3Y93_11615 fa7f4b74e390061235b6d1a43d1cef95 337 ProSitePatterns PS00534 Ferrochelatase signature. 197 216 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 C3Y93_11615 fa7f4b74e390061235b6d1a43d1cef95 337 Gene3D G3DSA:3.40.50.1400 8 328 2.7E-91 T 14-10-2018 C3Y93_11615 fa7f4b74e390061235b6d1a43d1cef95 337 TIGRFAM TIGR00109 hemH: ferrochelatase 6 327 2.0E-87 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 C3Y93_00145 e339ab2104268d22610b34925beba2f4 273 Gene3D G3DSA:1.10.166.10 1 70 1.2E-28 T 14-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 C3Y93_00145 e339ab2104268d22610b34925beba2f4 273 Gene3D G3DSA:2.160.10.10 87 257 2.8E-55 T 14-10-2018 C3Y93_00145 e339ab2104268d22610b34925beba2f4 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 3.1E-24 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 C3Y93_00145 e339ab2104268d22610b34925beba2f4 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 271 4.1E-147 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 C3Y93_00145 e339ab2104268d22610b34925beba2f4 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 C3Y93_00145 e339ab2104268d22610b34925beba2f4 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 3.5E-13 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_00145 e339ab2104268d22610b34925beba2f4 273 SUPERFAMILY SSF51161 2 256 7.9E-72 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3Y93_00145 e339ab2104268d22610b34925beba2f4 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 57.023 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 C3Y93_00145 e339ab2104268d22610b34925beba2f4 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0014 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_03505 14f0ae71f479d3555955e3aa6505ef9c 345 Gene3D G3DSA:3.20.20.70 1 345 3.4E-152 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_03505 14f0ae71f479d3555955e3aa6505ef9c 345 PIRSF PIRSF001359 1 329 5.1E-80 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C3Y93_03505 14f0ae71f479d3555955e3aa6505ef9c 345 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 1.3E-89 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C3Y93_03505 14f0ae71f479d3555955e3aa6505ef9c 345 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 1.6E-92 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C3Y93_03505 14f0ae71f479d3555955e3aa6505ef9c 345 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 344 2.7E-194 T 14-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 C3Y93_03505 14f0ae71f479d3555955e3aa6505ef9c 345 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C3Y93_03505 14f0ae71f479d3555955e3aa6505ef9c 345 SUPERFAMILY SSF51569 3 328 2.2E-103 T 14-10-2018 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 Gene3D G3DSA:3.30.54.20 130 186 5.8E-60 T 14-10-2018 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 SUPERFAMILY SSF52954 528 632 2.87E-30 T 14-10-2018 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 SUPERFAMILY SSF55186 63 240 1.31E-64 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 SUPERFAMILY SSF55681 242 525 1.23E-99 T 14-10-2018 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 33.505 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 SMART SM00863 169 218 3.0E-20 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 SUPERFAMILY SSF81271 3 61 4.25E-15 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 629 7.8E-222 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 Gene3D G3DSA:3.30.930.10 222 530 5.7E-129 T 14-10-2018 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 Pfam PF02824 TGS domain 4 61 3.4E-11 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 218 1.5E-13 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 317 528 3.7E-46 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 Gene3D G3DSA:3.30.980.10 69 221 5.8E-60 T 14-10-2018 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 5.1E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 5.1E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 5.1E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 5.1E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 5.1E-52 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 Gene3D G3DSA:3.10.20.30 3 63 2.7E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 Pfam PF03129 Anticodon binding domain 540 628 6.3E-19 T 14-10-2018 IPR004154 Anticodon-binding C3Y93_06710 b013ea5c0953ab7e0cf78ef07f9ad922 640 Gene3D G3DSA:3.40.50.800 531 637 2.1E-28 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily C3Y93_12525 c6aa0e27f1f78d803c329567ad92cd25 446 Pfam PF16360 GTP-binding GTPase Middle Region 115 193 2.0E-24 T 14-10-2018 IPR032305 GTP-binding protein, middle domain C3Y93_12525 c6aa0e27f1f78d803c329567ad92cd25 446 Pfam PF13167 GTP-binding GTPase N-terminal 28 113 1.9E-32 T 14-10-2018 IPR025121 GTPase HflX, N-terminal C3Y93_12525 c6aa0e27f1f78d803c329567ad92cd25 446 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 13 359 7.1E-143 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 C3Y93_12525 c6aa0e27f1f78d803c329567ad92cd25 446 Hamap MF_00900 GTPase HflX [hflX]. 27 389 46.252 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 C3Y93_12525 c6aa0e27f1f78d803c329567ad92cd25 446 SUPERFAMILY SSF52540 199 371 1.0E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_12525 c6aa0e27f1f78d803c329567ad92cd25 446 Pfam PF01926 50S ribosome-binding GTPase 201 318 1.5E-19 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_12525 c6aa0e27f1f78d803c329567ad92cd25 446 SUPERFAMILY SSF54980 367 416 4.89E-5 T 14-10-2018 IPR035647 EF-G domain III/V-like C3Y93_12525 c6aa0e27f1f78d803c329567ad92cd25 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 1.6E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_12525 c6aa0e27f1f78d803c329567ad92cd25 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 1.6E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_12525 c6aa0e27f1f78d803c329567ad92cd25 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 1.6E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_12525 c6aa0e27f1f78d803c329567ad92cd25 446 Gene3D G3DSA:3.40.50.300 198 366 3.5E-37 T 14-10-2018 C3Y93_12525 c6aa0e27f1f78d803c329567ad92cd25 446 PIRSF PIRSF006809 6 420 3.1E-138 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 C3Y93_12525 c6aa0e27f1f78d803c329567ad92cd25 446 Gene3D G3DSA:3.40.50.11060 17 139 3.3E-38 T 14-10-2018 C3Y93_05320 5cd62de8408f06a1e7a215ac665f8184 64 ProSitePatterns PS01047 Heavy-metal-associated domain. 5 34 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 C3Y93_05320 5cd62de8408f06a1e7a215ac665f8184 64 Pfam PF00403 Heavy-metal-associated domain 4 53 9.0E-11 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 C3Y93_05320 5cd62de8408f06a1e7a215ac665f8184 64 Gene3D G3DSA:3.30.70.100 1 61 2.3E-16 T 14-10-2018 C3Y93_05320 5cd62de8408f06a1e7a215ac665f8184 64 SUPERFAMILY SSF55008 2 62 5.5E-15 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C3Y93_11485 8c30ec0baf87c570220cd1d0726f7eac 1239 Gene3D G3DSA:1.10.486.10 608 752 3.7E-66 T 14-10-2018 C3Y93_11485 8c30ec0baf87c570220cd1d0726f7eac 1239 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 2 1233 15.274 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 C3Y93_11485 8c30ec0baf87c570220cd1d0726f7eac 1239 Pfam PF12705 PD-(D/E)XK nuclease superfamily 988 1204 3.0E-6 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type C3Y93_11485 8c30ec0baf87c570220cd1d0726f7eac 1239 SUPERFAMILY SSF52980 923 1232 1.18E-54 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C3Y93_11485 8c30ec0baf87c570220cd1d0726f7eac 1239 Gene3D G3DSA:3.40.50.300 2 468 1.2E-72 T 14-10-2018 C3Y93_11485 8c30ec0baf87c570220cd1d0726f7eac 1239 Pfam PF13361 UvrD-like helicase C-terminal domain 752 846 2.9E-12 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C3Y93_11485 8c30ec0baf87c570220cd1d0726f7eac 1239 Gene3D G3DSA:1.10.3170.10 150 378 1.2E-72 T 14-10-2018 C3Y93_11485 8c30ec0baf87c570220cd1d0726f7eac 1239 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 468 5.4E-47 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 C3Y93_11485 8c30ec0baf87c570220cd1d0726f7eac 1239 Pfam PF13361 UvrD-like helicase C-terminal domain 477 656 2.2E-11 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C3Y93_11485 8c30ec0baf87c570220cd1d0726f7eac 1239 Gene3D G3DSA:3.40.50.300 482 861 3.7E-66 T 14-10-2018 C3Y93_11485 8c30ec0baf87c570220cd1d0726f7eac 1239 Gene3D G3DSA:3.90.320.10 918 1236 2.3E-70 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal C3Y93_11485 8c30ec0baf87c570220cd1d0726f7eac 1239 SUPERFAMILY SSF52540 4 850 5.52E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11245 7fa3a3e7848389fdb7e1840014fedb78 354 Pfam PF07724 AAA domain (Cdc48 subfamily) 78 257 1.7E-32 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3Y93_11245 7fa3a3e7848389fdb7e1840014fedb78 354 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 267 335 3.7E-10 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3Y93_11245 7fa3a3e7848389fdb7e1840014fedb78 354 SUPERFAMILY SSF52540 45 322 1.51E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11245 7fa3a3e7848389fdb7e1840014fedb78 354 Gene3D G3DSA:3.40.50.300 28 263 2.5E-54 T 14-10-2018 C3Y93_11245 7fa3a3e7848389fdb7e1840014fedb78 354 Gene3D G3DSA:1.10.8.60 265 354 2.6E-11 T 14-10-2018 C3Y93_11245 7fa3a3e7848389fdb7e1840014fedb78 354 SMART SM01086 265 351 1.3E-5 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3Y93_11245 7fa3a3e7848389fdb7e1840014fedb78 354 SMART SM00382 79 245 6.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_11245 7fa3a3e7848389fdb7e1840014fedb78 354 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 128 146 6.2E-26 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3Y93_11245 7fa3a3e7848389fdb7e1840014fedb78 354 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 195 209 6.2E-26 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3Y93_11245 7fa3a3e7848389fdb7e1840014fedb78 354 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 83 101 6.2E-26 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3Y93_11245 7fa3a3e7848389fdb7e1840014fedb78 354 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 161 179 6.2E-26 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3Y93_03400 b486dfd8607691bad39cdcea36b87b3c 546 Pfam PF00117 Glutamine amidotransferase class-I 302 535 2.9E-58 T 14-10-2018 IPR017926 Glutamine amidotransferase C3Y93_03400 b486dfd8607691bad39cdcea36b87b3c 546 Gene3D G3DSA:3.40.50.880 286 546 6.2E-101 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_03400 b486dfd8607691bad39cdcea36b87b3c 546 SUPERFAMILY SSF52540 1 267 1.93E-114 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_03400 b486dfd8607691bad39cdcea36b87b3c 546 Hamap MF_01227 CTP synthase [pyrG]. 2 542 49.679 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 C3Y93_03400 b486dfd8607691bad39cdcea36b87b3c 546 Gene3D G3DSA:3.40.50.300 1 285 9.3E-123 T 14-10-2018 C3Y93_03400 b486dfd8607691bad39cdcea36b87b3c 546 SUPERFAMILY SSF52317 290 544 1.83E-84 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_03400 b486dfd8607691bad39cdcea36b87b3c 546 Pfam PF06418 CTP synthase N-terminus 4 264 8.4E-119 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 C3Y93_03400 b486dfd8607691bad39cdcea36b87b3c 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 537 8.8E-242 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 C3Y93_07950 5bf92edcd3b75048ccd0aa8ca08fe451 607 SUPERFAMILY SSF47203 287 478 4.67E-45 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3Y93_07950 5bf92edcd3b75048ccd0aa8ca08fe451 607 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 457 6.8E-21 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3Y93_07950 5bf92edcd3b75048ccd0aa8ca08fe451 607 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 157 3.5E-17 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3Y93_07950 5bf92edcd3b75048ccd0aa8ca08fe451 607 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 2.6E-18 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3Y93_07950 5bf92edcd3b75048ccd0aa8ca08fe451 607 Gene3D G3DSA:1.20.140.10 288 464 6.9E-41 T 14-10-2018 C3Y93_07950 5bf92edcd3b75048ccd0aa8ca08fe451 607 Gene3D G3DSA:2.40.110.10 161 287 6.7E-30 T 14-10-2018 C3Y93_07950 5bf92edcd3b75048ccd0aa8ca08fe451 607 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 472 598 7.1E-30 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain C3Y93_07950 5bf92edcd3b75048ccd0aa8ca08fe451 607 Gene3D G3DSA:1.10.540.10 31 159 1.0E-20 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3Y93_07950 5bf92edcd3b75048ccd0aa8ca08fe451 607 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 27 1.0E-6 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria C3Y93_07950 5bf92edcd3b75048ccd0aa8ca08fe451 607 SUPERFAMILY SSF56645 37 280 6.68E-62 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3Y93_07565 d6eeb9ad7703ac1c0489a55cd2ac6ebd 173 Pfam PF01625 Peptide methionine sulfoxide reductase 3 153 5.8E-63 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C3Y93_07565 d6eeb9ad7703ac1c0489a55cd2ac6ebd 173 Gene3D G3DSA:3.30.1060.10 1 160 8.7E-70 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C3Y93_07565 d6eeb9ad7703ac1c0489a55cd2ac6ebd 173 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 157 37.379 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C3Y93_07565 d6eeb9ad7703ac1c0489a55cd2ac6ebd 173 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 152 2.4E-59 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C3Y93_07565 d6eeb9ad7703ac1c0489a55cd2ac6ebd 173 SUPERFAMILY SSF55068 1 163 4.32E-71 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C3Y93_08330 e55d3c5d4c1d6c10e21476eefd91e6d4 303 SUPERFAMILY SSF81799 111 207 9.94E-34 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 C3Y93_08330 e55d3c5d4c1d6c10e21476eefd91e6d4 303 Gene3D G3DSA:1.10.150.170 110 209 6.1E-103 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 C3Y93_08330 e55d3c5d4c1d6c10e21476eefd91e6d4 303 Gene3D G3DSA:3.40.50.150 6 301 6.1E-103 T 14-10-2018 C3Y93_08330 e55d3c5d4c1d6c10e21476eefd91e6d4 303 Pfam PF01795 MraW methylase family 2 301 4.9E-108 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 C3Y93_08330 e55d3c5d4c1d6c10e21476eefd91e6d4 303 SUPERFAMILY SSF53335 3 302 6.21E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_08330 e55d3c5d4c1d6c10e21476eefd91e6d4 303 PIRSF PIRSF004486 1 303 1.2E-103 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 C3Y93_08330 e55d3c5d4c1d6c10e21476eefd91e6d4 303 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 301 9.2E-109 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 C3Y93_08330 e55d3c5d4c1d6c10e21476eefd91e6d4 303 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 3 302 36.912 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 C3Y93_01785 53744ca6766173abb57accd61f0041bb 327 Gene3D G3DSA:1.10.10.60 225 327 3.0E-21 T 14-10-2018 C3Y93_01785 53744ca6766173abb57accd61f0041bb 327 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 11 197 4.6E-17 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal C3Y93_01785 53744ca6766173abb57accd61f0041bb 327 SUPERFAMILY SSF46689 283 326 8.96E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_01785 53744ca6766173abb57accd61f0041bb 327 SMART SM00342 244 326 6.7E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_01785 53744ca6766173abb57accd61f0041bb 327 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 310 326 9.4E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 C3Y93_01785 53744ca6766173abb57accd61f0041bb 327 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 310 9.4E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 C3Y93_01785 53744ca6766173abb57accd61f0041bb 327 Pfam PF12833 Helix-turn-helix domain 251 326 3.1E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_02355 0099e27bb5b2990c96093a0fd4eb038d 468 SMART SM00388 237 309 7.0E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_02355 0099e27bb5b2990c96093a0fd4eb038d 468 Gene3D G3DSA:1.10.287.130 188 306 4.8E-13 T 14-10-2018 C3Y93_02355 0099e27bb5b2990c96093a0fd4eb038d 468 SMART SM00387 355 459 4.4E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_02355 0099e27bb5b2990c96093a0fd4eb038d 468 SUPERFAMILY SSF47384 222 309 5.1E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3Y93_02355 0099e27bb5b2990c96093a0fd4eb038d 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 456 1.7E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_02355 0099e27bb5b2990c96093a0fd4eb038d 468 Pfam PF08521 Two-component sensor kinase N-terminal 19 154 1.7E-8 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal C3Y93_02355 0099e27bb5b2990c96093a0fd4eb038d 468 SUPERFAMILY SSF55874 316 455 2.36E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_02355 0099e27bb5b2990c96093a0fd4eb038d 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 309 2.6E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_02355 0099e27bb5b2990c96093a0fd4eb038d 468 Gene3D G3DSA:3.30.565.10 307 457 7.1E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_12540 a04f464d6b243f67ca842ee4d3ef1a0b 336 Gene3D G3DSA:3.60.21.10 114 307 1.9E-18 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C3Y93_12540 a04f464d6b243f67ca842ee4d3ef1a0b 336 Pfam PF00149 Calcineurin-like phosphoesterase 116 288 1.2E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C3Y93_12540 a04f464d6b243f67ca842ee4d3ef1a0b 336 SUPERFAMILY SSF56300 116 335 7.06E-30 T 14-10-2018 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 Gene3D G3DSA:3.30.70.1440 657 858 0.0 T 14-10-2018 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 SUPERFAMILY SSF82714 707 799 8.11E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 Pfam PF00873 AcrB/AcrD/AcrF family 4 1018 1.2E-265 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 SUPERFAMILY SSF82693 40 132 1.15E-21 T 14-10-2018 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 Gene3D G3DSA:3.30.2090.10 178 268 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 SUPERFAMILY SSF82693 138 323 6.28E-21 T 14-10-2018 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 Gene3D G3DSA:3.30.2090.10 706 801 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 Gene3D G3DSA:1.20.1640.10 10 506 0.0 T 14-10-2018 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 Gene3D G3DSA:3.30.70.1430 561 656 0.0 T 14-10-2018 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 Gene3D G3DSA:3.30.70.1430 40 809 0.0 T 14-10-2018 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 SUPERFAMILY SSF82693 560 651 1.78E-9 T 14-10-2018 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.4E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 5.4E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 5.4E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 5.4E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.4E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 5.4E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 5.4E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 5.4E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 Gene3D G3DSA:3.30.70.1320 134 325 0.0 T 14-10-2018 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 SUPERFAMILY SSF82714 182 264 2.62E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 Gene3D G3DSA:1.20.1640.10 507 1015 0.0 T 14-10-2018 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 SUPERFAMILY SSF82866 798 1021 1.12E-48 T 14-10-2018 C3Y93_05730 018c3012e5a2b148053d4fa0a26088be 1034 SUPERFAMILY SSF82866 290 488 3.01E-45 T 14-10-2018 C3Y93_11710 dde32b2c108d6c57372f47fcb19718d1 88 Pfam PF04024 PspC domain 6 62 2.4E-20 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal C3Y93_09230 f5700e8dc40554abc1d1e9b71ccf8d64 482 SUPERFAMILY SSF53623 108 325 3.66E-73 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3Y93_09230 f5700e8dc40554abc1d1e9b71ccf8d64 482 SUPERFAMILY SSF53244 326 474 1.79E-45 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3Y93_09230 f5700e8dc40554abc1d1e9b71ccf8d64 482 SUPERFAMILY SSF51984 22 109 9.03E-29 T 14-10-2018 C3Y93_09230 f5700e8dc40554abc1d1e9b71ccf8d64 482 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 416 4.6E-22 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C3Y93_09230 f5700e8dc40554abc1d1e9b71ccf8d64 482 Pfam PF01225 Mur ligase family, catalytic domain 24 122 4.4E-29 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 C3Y93_09230 f5700e8dc40554abc1d1e9b71ccf8d64 482 Gene3D G3DSA:3.40.50.720 23 110 2.2E-32 T 14-10-2018 C3Y93_09230 f5700e8dc40554abc1d1e9b71ccf8d64 482 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 480 42.581 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_09230 f5700e8dc40554abc1d1e9b71ccf8d64 482 Gene3D G3DSA:3.90.190.20 324 480 1.2E-45 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3Y93_09230 f5700e8dc40554abc1d1e9b71ccf8d64 482 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 24 472 5.0E-167 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_09230 f5700e8dc40554abc1d1e9b71ccf8d64 482 Gene3D G3DSA:3.40.1190.10 111 323 5.9E-80 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3Y93_09230 f5700e8dc40554abc1d1e9b71ccf8d64 482 Pfam PF08245 Mur ligase middle domain 127 307 1.3E-29 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C3Y93_01680 f3a255d5197a55eabd94b7f517594c12 253 SUPERFAMILY SSF53448 3 246 3.43E-55 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_01680 f3a255d5197a55eabd94b7f517594c12 253 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 242 3.3E-77 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 C3Y93_01680 f3a255d5197a55eabd94b7f517594c12 253 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 249 36.875 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 C3Y93_01680 f3a255d5197a55eabd94b7f517594c12 253 Pfam PF02348 Cytidylyltransferase 4 222 2.7E-49 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 C3Y93_01680 f3a255d5197a55eabd94b7f517594c12 253 Gene3D G3DSA:3.90.550.10 1 252 4.6E-91 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_00420 b4885148b69d007dda16b15e4feacc0c 161 Pfam PF00293 NUDIX domain 7 126 1.7E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3Y93_00420 b4885148b69d007dda16b15e4feacc0c 161 SUPERFAMILY SSF55811 3 145 4.06E-29 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3Y93_00420 b4885148b69d007dda16b15e4feacc0c 161 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C3Y93_00420 b4885148b69d007dda16b15e4feacc0c 161 Gene3D G3DSA:3.90.79.10 1 153 5.4E-38 T 14-10-2018 C3Y93_09875 be0ecd38dfce71879c49cf11a295709c 373 SUPERFAMILY SSF56059 97 295 2.3E-64 T 14-10-2018 C3Y93_09875 be0ecd38dfce71879c49cf11a295709c 373 Gene3D G3DSA:3.30.470.20 173 371 2.6E-75 T 14-10-2018 C3Y93_09875 be0ecd38dfce71879c49cf11a295709c 373 Pfam PF02222 ATP-grasp domain 106 275 7.5E-57 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type C3Y93_09875 be0ecd38dfce71879c49cf11a295709c 373 SUPERFAMILY SSF52440 3 96 2.3E-17 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3Y93_09875 be0ecd38dfce71879c49cf11a295709c 373 SUPERFAMILY SSF51246 299 364 2.67E-17 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C3Y93_09875 be0ecd38dfce71879c49cf11a295709c 373 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 351 3.8E-113 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 C3Y93_09875 be0ecd38dfce71879c49cf11a295709c 373 Gene3D G3DSA:3.40.50.20 1 101 1.4E-26 T 14-10-2018 C3Y93_09875 be0ecd38dfce71879c49cf11a295709c 373 Gene3D G3DSA:3.30.1490.20 102 172 3.1E-26 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3Y93_09875 be0ecd38dfce71879c49cf11a295709c 373 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 4 347 39.672 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 PIRSF PIRSF000350 1 458 6.6E-63 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 343 448 2.3E-18 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 Gene3D G3DSA:3.50.50.60 2 325 8.2E-81 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 317 1.2E-38 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 SUPERFAMILY SSF55424 342 455 4.64E-26 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 Gene3D G3DSA:3.30.390.30 339 458 2.4E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 1.3E-38 T 14-10-2018 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 131 140 1.3E-38 T 14-10-2018 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.3E-38 T 14-10-2018 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.3E-38 T 14-10-2018 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 1.3E-38 T 14-10-2018 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.3E-38 T 14-10-2018 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 1.3E-38 T 14-10-2018 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 1.3E-38 T 14-10-2018 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 1.3E-38 T 14-10-2018 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.0E-13 T 14-10-2018 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.0E-13 T 14-10-2018 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 2.0E-13 T 14-10-2018 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 128 146 2.0E-13 T 14-10-2018 C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 SUPERFAMILY SSF51905 1 326 2.04E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_12215 bfd7b25e2ba802e40b14831cb3e5ce53 459 Gene3D G3DSA:3.50.50.60 140 261 8.2E-81 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_06010 f056cddb7b60004d7ee728d0eabf181b 348 SUPERFAMILY SSF53067 153 339 5.49E-49 T 14-10-2018 C3Y93_06010 f056cddb7b60004d7ee728d0eabf181b 348 Pfam PF06723 MreB/Mbl protein 13 339 3.5E-141 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C3Y93_06010 f056cddb7b60004d7ee728d0eabf181b 348 SUPERFAMILY SSF53067 10 151 2.83E-36 T 14-10-2018 C3Y93_06010 f056cddb7b60004d7ee728d0eabf181b 348 Gene3D G3DSA:3.30.420.40 157 322 1.2E-127 T 14-10-2018 C3Y93_06010 f056cddb7b60004d7ee728d0eabf181b 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 3.6E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C3Y93_06010 f056cddb7b60004d7ee728d0eabf181b 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 71 94 3.6E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C3Y93_06010 f056cddb7b60004d7ee728d0eabf181b 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 3.6E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C3Y93_06010 f056cddb7b60004d7ee728d0eabf181b 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 3.6E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C3Y93_06010 f056cddb7b60004d7ee728d0eabf181b 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 51 69 3.6E-60 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C3Y93_06010 f056cddb7b60004d7ee728d0eabf181b 348 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 339 5.1E-149 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C3Y93_06010 f056cddb7b60004d7ee728d0eabf181b 348 Gene3D G3DSA:3.30.420.40 14 332 1.2E-127 T 14-10-2018 C3Y93_06010 f056cddb7b60004d7ee728d0eabf181b 348 Gene3D G3DSA:3.90.640.10 189 264 1.2E-127 T 14-10-2018 C3Y93_01695 9765984b34777c00250e62ef6a63844a 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 255 4.5E-81 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 C3Y93_01695 9765984b34777c00250e62ef6a63844a 257 SUPERFAMILY SSF51556 2 255 2.07E-78 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3Y93_01695 9765984b34777c00250e62ef6a63844a 257 Pfam PF01026 TatD related DNase 3 254 5.3E-70 T 14-10-2018 IPR001130 TatD family GO:0016788 C3Y93_01695 9765984b34777c00250e62ef6a63844a 257 PIRSF PIRSF005902 1 257 8.1E-72 T 14-10-2018 IPR001130 TatD family GO:0016788 C3Y93_01695 9765984b34777c00250e62ef6a63844a 257 Gene3D G3DSA:3.20.20.140 1 256 1.3E-84 T 14-10-2018 C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 Pfam PF00009 Elongation factor Tu GTP binding domain 412 566 1.2E-34 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 97 3.0E-14 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 SUPERFAMILY SSF52156 685 814 1.44E-34 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 332 380 5.0E-11 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 409 566 3.3E-32 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 905 16.715 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 Gene3D G3DSA:2.40.30.10 579 696 1.3E-40 T 14-10-2018 C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 SUPERFAMILY SSF50447 809 905 4.99E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 SUPERFAMILY SSF50447 580 663 2.43E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 Gene3D G3DSA:3.30.56.50 2 51 2.6E-8 T 14-10-2018 C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 Gene3D G3DSA:3.40.50.300 405 578 1.6E-70 T 14-10-2018 C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 Gene3D G3DSA:2.40.30.10 809 906 1.7E-28 T 14-10-2018 C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 ProSitePatterns PS01176 Initiation factor 2 signature. 858 880 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 SUPERFAMILY SSF52540 403 576 8.77E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 Gene3D G3DSA:3.40.50.10050 702 808 7.6E-35 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 SUPERFAMILY SSF46955 3 51 2.56E-8 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 Pfam PF11987 Translation-initiation factor 2 692 797 1.8E-34 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 C3Y93_11390 b308d724b0cfd110b25f5c944d375d03 907 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 326 907 1.5E-245 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 C3Y93_00410 94e3dd61ed5157d29f5689c94d119669 243 SUPERFAMILY SSF101322 13 236 1.57E-51 T 14-10-2018 IPR035932 HflD-like superfamily C3Y93_00410 94e3dd61ed5157d29f5689c94d119669 243 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 20 229 4.0E-105 T 14-10-2018 C3Y93_00410 94e3dd61ed5157d29f5689c94d119669 243 Pfam PF04356 Protein of unknown function (DUF489) 17 229 6.6E-54 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD C3Y93_00410 94e3dd61ed5157d29f5689c94d119669 243 Gene3D G3DSA:1.10.3890.10 13 241 2.2E-60 T 14-10-2018 IPR035932 HflD-like superfamily C3Y93_00410 94e3dd61ed5157d29f5689c94d119669 243 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 11 237 26.47 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD C3Y93_08920 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 7 22 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_08920 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 41 54 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_08920 11a14165b9f48e49cb97408b9e6b17f1 271 Pfam PF00809 Pterin binding enzyme 8 249 3.6E-71 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_08920 11a14165b9f48e49cb97408b9e6b17f1 271 SUPERFAMILY SSF51717 3 266 2.22E-72 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_08920 11a14165b9f48e49cb97408b9e6b17f1 271 Gene3D G3DSA:3.20.20.20 1 270 1.5E-75 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_08920 11a14165b9f48e49cb97408b9e6b17f1 271 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 7 263 7.8E-75 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 C3Y93_02370 1cb63a88df343edfc6ef7307909cf9bc 276 SUPERFAMILY SSF52833 111 272 5.84E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_02370 1cb63a88df343edfc6ef7307909cf9bc 276 Pfam PF00578 AhpC/TSA family 141 253 4.5E-14 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3Y93_02370 1cb63a88df343edfc6ef7307909cf9bc 276 Gene3D G3DSA:3.40.30.10 135 274 8.1E-31 T 14-10-2018 C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 Pfam PF03461 TRCF domain 1011 1102 1.7E-27 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 Pfam PF00270 DEAD/DEAH box helicase 609 764 6.8E-20 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 SUPERFAMILY SSF52540 784 992 2.26E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 SUPERFAMILY SSF52540 353 467 1.55E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 Gene3D G3DSA:3.40.50.11180 27 338 8.7E-101 T 14-10-2018 C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 Pfam PF02559 CarD-like/TRCF domain 482 575 8.4E-22 T 14-10-2018 IPR003711 CarD-like/TRCF domain C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 22 1108 27.146 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 Gene3D G3DSA:3.90.1150.50 1006 1151 1.4E-43 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 Gene3D G3DSA:3.30.2060.10 128 213 8.7E-101 T 14-10-2018 C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 SUPERFAMILY SSF143517 997 1149 4.45E-43 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 SUPERFAMILY SSF52540 525 785 2.32E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 SMART SM00487 602 797 3.3E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 SUPERFAMILY SSF52540 9 345 1.1E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 SMART SM01058 481 578 1.4E-45 T 14-10-2018 IPR003711 CarD-like/TRCF domain C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 Gene3D G3DSA:2.30.30.840 485 543 1.7E-229 T 14-10-2018 C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 Gene3D G3DSA:3.40.50.300 544 783 1.7E-229 T 14-10-2018 C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 911 6.5E-17 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1084 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 Gene3D G3DSA:3.40.50.11140 360 455 3.6E-10 T 14-10-2018 C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 Gene3D G3DSA:3.40.50.300 480 991 1.7E-229 T 14-10-2018 C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 SMART SM00982 1010 1110 6.8E-46 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 SMART SM00490 828 912 5.1E-18 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_02060 85a28ce1f286c0caafdacd39ed4144b6 1153 SUPERFAMILY SSF141259 473 550 1.44E-21 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 Hamap MF_00952 DNA topoisomerase 1 [topA]. 22 749 55.099 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 SMART SM00493 22 153 9.0E-31 T 14-10-2018 IPR006171 TOPRIM domain C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 SUPERFAMILY SSF57783 824 878 2.04E-17 T 14-10-2018 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 SUPERFAMILY SSF57783 599 639 6.29E-9 T 14-10-2018 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 Gene3D G3DSA:2.20.25.10 823 879 3.8E-22 T 14-10-2018 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 Gene3D G3DSA:3.40.50.140 20 184 2.4E-67 T 14-10-2018 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 614 639 8.0E-5 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 728 759 9.0E-6 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 SUPERFAMILY SSF57783 759 822 4.76E-15 T 14-10-2018 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 SUPERFAMILY SSF56712 23 626 9.55E-202 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 Gene3D G3DSA:1.10.290.10 300 424 6.9E-157 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 24 649 3.6E-244 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 Pfam PF08272 Topoisomerase I zinc-ribbon-like 773 808 2.3E-11 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 Pfam PF08272 Topoisomerase I zinc-ribbon-like 839 878 1.5E-17 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 Gene3D G3DSA:1.10.460.10 186 590 6.9E-157 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 Gene3D G3DSA:3.30.65.10 760 822 3.7E-21 T 14-10-2018 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 Gene3D G3DSA:3.30.65.10 714 759 5.7E-7 T 14-10-2018 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 SUPERFAMILY SSF57783 717 755 1.87E-6 T 14-10-2018 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 212 230 3.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 127 140 3.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 509 523 3.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 410 426 3.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 334 343 3.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 329 343 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 Pfam PF01131 DNA topoisomerase 178 583 1.0E-128 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 Gene3D G3DSA:2.70.20.10 234 492 6.9E-157 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 Pfam PF01751 Toprim domain 24 163 1.0E-32 T 14-10-2018 IPR006171 TOPRIM domain C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 SMART SM00436 154 242 8.0E-51 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 C3Y93_11995 c882727c60fb86c9cc1c71b8a37066c9 879 SMART SM00437 292 546 1.1E-123 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 C3Y93_08570 2383e9b458956da07d5558f4a8f581de 613 Pfam PF01380 SIS domain 287 420 1.9E-27 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 C3Y93_08570 2383e9b458956da07d5558f4a8f581de 613 Pfam PF01380 SIS domain 465 595 3.7E-26 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 C3Y93_08570 2383e9b458956da07d5558f4a8f581de 613 Gene3D G3DSA:3.60.20.10 2 238 1.2E-76 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3Y93_08570 2383e9b458956da07d5558f4a8f581de 613 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 613 3.3E-251 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 C3Y93_08570 2383e9b458956da07d5558f4a8f581de 613 Gene3D G3DSA:3.40.50.10490 450 598 2.6E-139 T 14-10-2018 C3Y93_08570 2383e9b458956da07d5558f4a8f581de 613 Pfam PF13522 Glutamine amidotransferase domain 59 180 1.3E-21 T 14-10-2018 C3Y93_08570 2383e9b458956da07d5558f4a8f581de 613 SUPERFAMILY SSF56235 2 222 5.06E-71 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3Y93_08570 2383e9b458956da07d5558f4a8f581de 613 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 613 40.352 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 C3Y93_08570 2383e9b458956da07d5558f4a8f581de 613 Gene3D G3DSA:3.40.50.10490 247 612 2.6E-139 T 14-10-2018 C3Y93_08570 2383e9b458956da07d5558f4a8f581de 613 SUPERFAMILY SSF53697 244 613 5.66E-106 T 14-10-2018 C3Y93_05505 593c33b7c79e83d6bc343518c527666a 276 Pfam PF04170 NlpE N-terminal domain 61 114 5.9E-6 T 14-10-2018 IPR007298 Copper resistance lipoprotein NlpE C3Y93_05505 593c33b7c79e83d6bc343518c527666a 276 Gene3D G3DSA:2.40.128.640 46 151 3.7E-7 T 14-10-2018 C3Y93_00020 efbaef476fc62fcb75e3bf3b384d666f 820 SUPERFAMILY SSF51126 13 341 4.46E-9 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor C3Y93_00020 efbaef476fc62fcb75e3bf3b384d666f 820 TIGRFAM TIGR04214 CSLREA_Nterm: CSLREA domain 27 52 1.9E-8 T 14-10-2018 IPR026457 CSLREA domain C3Y93_00020 efbaef476fc62fcb75e3bf3b384d666f 820 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 795 816 0.003 T 14-10-2018 IPR020008 GlyGly-CTERM domain C3Y93_00465 7446d4ba6380243384772173b86491e2 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 398 2.0E-131 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 C3Y93_00465 7446d4ba6380243384772173b86491e2 403 PIRSF PIRSF000521 173 401 2.9E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3Y93_00465 7446d4ba6380243384772173b86491e2 403 PIRSF PIRSF000521 23 163 1.2E-11 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3Y93_00465 7446d4ba6380243384772173b86491e2 403 Pfam PF00202 Aminotransferase class-III 26 397 4.9E-105 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3Y93_00465 7446d4ba6380243384772173b86491e2 403 Gene3D G3DSA:3.40.640.10 60 308 2.1E-127 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_00465 7446d4ba6380243384772173b86491e2 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 16 401 69.378 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 C3Y93_00465 7446d4ba6380243384772173b86491e2 403 Gene3D G3DSA:3.90.1150.10 25 388 2.1E-127 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_00465 7446d4ba6380243384772173b86491e2 403 SUPERFAMILY SSF53383 14 399 9.74E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_00465 7446d4ba6380243384772173b86491e2 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 226 263 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3Y93_09110 5fadf7768ca560e08b383fdc5b2e4698 647 Pfam PF00501 AMP-binding enzyme 81 520 6.7E-94 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3Y93_09110 5fadf7768ca560e08b383fdc5b2e4698 647 SUPERFAMILY SSF56801 13 644 2.49E-186 T 14-10-2018 C3Y93_09110 5fadf7768ca560e08b383fdc5b2e4698 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 641 8.1E-301 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 C3Y93_09110 5fadf7768ca560e08b383fdc5b2e4698 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 23 79 2.2E-20 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 C3Y93_09110 5fadf7768ca560e08b383fdc5b2e4698 647 Gene3D G3DSA:3.40.50.12780 48 513 2.5E-108 T 14-10-2018 C3Y93_09110 5fadf7768ca560e08b383fdc5b2e4698 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 14-10-2018 IPR020845 AMP-binding, conserved site C3Y93_09110 5fadf7768ca560e08b383fdc5b2e4698 647 Gene3D G3DSA:3.30.300.30 516 645 3.2E-30 T 14-10-2018 C3Y93_09110 5fadf7768ca560e08b383fdc5b2e4698 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 643 51.357 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 C3Y93_09110 5fadf7768ca560e08b383fdc5b2e4698 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 529 607 1.9E-25 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 SUPERFAMILY SSF82866 297 498 6.93E-48 T 14-10-2018 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 SUPERFAMILY SSF82693 669 844 1.39E-14 T 14-10-2018 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 Gene3D G3DSA:1.20.1640.10 9 509 0.0 T 14-10-2018 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1028 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 14-10-2018 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 SUPERFAMILY SSF82693 137 331 2.75E-21 T 14-10-2018 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 SUPERFAMILY SSF82693 562 668 1.46E-22 T 14-10-2018 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 Gene3D G3DSA:3.30.70.1430 39 814 0.0 T 14-10-2018 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 SUPERFAMILY SSF82714 720 804 1.7E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 Gene3D G3DSA:3.30.70.1430 564 665 0.0 T 14-10-2018 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 SUPERFAMILY SSF82714 183 273 2.49E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 SUPERFAMILY SSF82693 39 132 1.06E-26 T 14-10-2018 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 SUPERFAMILY SSF82866 828 1021 3.53E-39 T 14-10-2018 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 Pfam PF00873 AcrB/AcrD/AcrF family 3 1022 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 Gene3D G3DSA:3.30.2090.10 718 806 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 1.2E-101 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.2E-101 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.2E-101 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.2E-101 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.2E-101 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.2E-101 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.2E-101 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.2E-101 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 1.2E-101 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 Gene3D G3DSA:3.30.70.1440 666 861 0.0 T 14-10-2018 C3Y93_13485 fa7472837d819c6d0ae7441521e4c422 1034 Gene3D G3DSA:1.20.1640.10 510 1018 0.0 T 14-10-2018 C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 PIRSF PIRSF001553 1 293 3.9E-129 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 PRINTS PR01798 Succinyl-CoA synthase signature 179 197 6.5E-36 T 14-10-2018 C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 PRINTS PR01798 Succinyl-CoA synthase signature 210 223 6.5E-36 T 14-10-2018 C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 6.5E-36 T 14-10-2018 C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 PRINTS PR01798 Succinyl-CoA synthase signature 242 259 6.5E-36 T 14-10-2018 C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 SMART SM00881 4 100 4.5E-37 T 14-10-2018 IPR003781 CoA-binding GO:0048037 C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 SUPERFAMILY SSF52210 125 290 4.45E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 290 6.3E-137 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 238 251 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 Gene3D G3DSA:3.40.50.261 126 291 2.8E-72 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 Gene3D G3DSA:3.40.50.720 1 125 8.0E-50 T 14-10-2018 C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 Pfam PF02629 CoA binding domain 6 99 2.7E-30 T 14-10-2018 IPR003781 CoA-binding GO:0048037 C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 154 183 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 Pfam PF00549 CoA-ligase 153 271 1.6E-17 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 SUPERFAMILY SSF51735 1 124 4.49E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_13310 e6eb848153b8680bfc0de0a3b6e26c6c 297 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 290 42.798 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3Y93_06510 7ca9160aad103188fe09c2cf5073c078 418 Gene3D G3DSA:3.65.10.10 21 229 9.0E-175 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 C3Y93_06510 7ca9160aad103188fe09c2cf5073c078 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 44.421 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_06510 7ca9160aad103188fe09c2cf5073c078 418 Gene3D G3DSA:3.65.10.10 6 414 9.0E-175 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 C3Y93_06510 7ca9160aad103188fe09c2cf5073c078 418 SUPERFAMILY SSF55205 1 417 8.63E-144 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 C3Y93_06510 7ca9160aad103188fe09c2cf5073c078 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.0E-176 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_06510 7ca9160aad103188fe09c2cf5073c078 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 5.3E-110 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 C3Y93_02335 4d20f72e316aa04c89936757edd0a9d3 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 1.3E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_02335 4d20f72e316aa04c89936757edd0a9d3 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 197 211 1.3E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_02335 4d20f72e316aa04c89936757edd0a9d3 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 1.3E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_02335 4d20f72e316aa04c89936757edd0a9d3 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 1.3E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_02335 4d20f72e316aa04c89936757edd0a9d3 253 SUPERFAMILY SSF53474 3 253 1.13E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_02335 4d20f72e316aa04c89936757edd0a9d3 253 Gene3D G3DSA:3.40.50.1820 3 253 1.5E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_02335 4d20f72e316aa04c89936757edd0a9d3 253 Pfam PF00561 alpha/beta hydrolase fold 17 240 3.2E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_11070 157acdd42b0d3b33ec09440aaa5d69a6 497 SUPERFAMILY SSF56322 15 490 1.44E-152 T 14-10-2018 IPR005801 ADC synthase GO:0009058 C3Y93_11070 157acdd42b0d3b33ec09440aaa5d69a6 497 PRINTS PR00095 Anthranilate synthase component I signature 422 436 2.8E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3Y93_11070 157acdd42b0d3b33ec09440aaa5d69a6 497 PRINTS PR00095 Anthranilate synthase component I signature 342 355 2.8E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3Y93_11070 157acdd42b0d3b33ec09440aaa5d69a6 497 PRINTS PR00095 Anthranilate synthase component I signature 328 341 2.8E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3Y93_11070 157acdd42b0d3b33ec09440aaa5d69a6 497 PRINTS PR00095 Anthranilate synthase component I signature 437 451 2.8E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3Y93_11070 157acdd42b0d3b33ec09440aaa5d69a6 497 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 488 2.9E-162 T 14-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3Y93_11070 157acdd42b0d3b33ec09440aaa5d69a6 497 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 173 2.5E-37 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3Y93_11070 157acdd42b0d3b33ec09440aaa5d69a6 497 Gene3D G3DSA:3.60.120.10 1 494 1.2E-177 T 14-10-2018 IPR005801 ADC synthase GO:0009058 C3Y93_11070 157acdd42b0d3b33ec09440aaa5d69a6 497 Pfam PF00425 chorismate binding enzyme 221 480 2.2E-92 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal C3Y93_09855 8bd129e05b54eadb3e52eef159bcdec0 361 SMART SM00829 12 358 0.0016 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C3Y93_09855 8bd129e05b54eadb3e52eef159bcdec0 361 Gene3D G3DSA:3.40.50.720 169 304 3.5E-97 T 14-10-2018 C3Y93_09855 8bd129e05b54eadb3e52eef159bcdec0 361 Gene3D G3DSA:3.90.180.10 18 345 3.5E-97 T 14-10-2018 C3Y93_09855 8bd129e05b54eadb3e52eef159bcdec0 361 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 73 87 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 C3Y93_09855 8bd129e05b54eadb3e52eef159bcdec0 361 SUPERFAMILY SSF51735 154 323 2.1E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_09855 8bd129e05b54eadb3e52eef159bcdec0 361 SUPERFAMILY SSF50129 4 170 1.49E-50 T 14-10-2018 IPR011032 GroES-like superfamily C3Y93_09855 8bd129e05b54eadb3e52eef159bcdec0 361 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 141 2.5E-27 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C3Y93_09855 8bd129e05b54eadb3e52eef159bcdec0 361 Pfam PF00107 Zinc-binding dehydrogenase 192 303 2.6E-25 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 460 480 4.6E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 460 4.6E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 Gene3D G3DSA:3.40.50.300 128 314 1.4E-67 T 14-10-2018 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 Gene3D G3DSA:1.10.10.60 391 480 1.2E-23 T 14-10-2018 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 SMART SM00382 163 306 4.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 SMART SM00448 4 115 1.2E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 SUPERFAMILY SSF46689 397 480 3.09E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 Gene3D G3DSA:3.40.50.2300 1 124 8.5E-39 T 14-10-2018 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 Gene3D G3DSA:1.10.8.60 316 390 2.6E-18 T 14-10-2018 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 477 6.6E-225 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 Pfam PF02954 Bacterial regulatory protein, Fis family 437 477 2.1E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 SUPERFAMILY SSF52172 1 188 1.85E-43 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 Pfam PF00158 Sigma-54 interaction domain 143 310 1.1E-71 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 Pfam PF00072 Response regulator receiver domain 6 115 4.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_01875 2ed8e15382d757f12d2481138c721d66 492 SUPERFAMILY SSF52540 142 386 2.43E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_02420 c682fbf1fcffc3fbf441ecb98fed0f2c 395 Pfam PF01636 Phosphotransferase enzyme family 70 318 1.1E-20 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase C3Y93_02420 c682fbf1fcffc3fbf441ecb98fed0f2c 395 Gene3D G3DSA:3.90.1200.10 146 364 4.6E-16 T 14-10-2018 C3Y93_02420 c682fbf1fcffc3fbf441ecb98fed0f2c 395 SUPERFAMILY SSF56112 72 346 2.61E-35 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3Y93_06645 02cbed20e7cb4b72430adf4cfceb7cc1 422 Gene3D G3DSA:3.40.50.300 130 417 4.3E-128 T 14-10-2018 C3Y93_06645 02cbed20e7cb4b72430adf4cfceb7cc1 422 SMART SM00357 52 118 5.8E-19 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 C3Y93_06645 02cbed20e7cb4b72430adf4cfceb7cc1 422 SMART SM00959 5 47 8.6E-17 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 C3Y93_06645 02cbed20e7cb4b72430adf4cfceb7cc1 422 SUPERFAMILY SSF50249 48 125 1.33E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_06645 02cbed20e7cb4b72430adf4cfceb7cc1 422 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.1E-32 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 C3Y93_06645 02cbed20e7cb4b72430adf4cfceb7cc1 422 SMART SM00382 170 355 3.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_06645 02cbed20e7cb4b72430adf4cfceb7cc1 422 Gene3D G3DSA:2.40.50.140 47 123 4.6E-34 T 14-10-2018 C3Y93_06645 02cbed20e7cb4b72430adf4cfceb7cc1 422 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 6.6E-23 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C3Y93_06645 02cbed20e7cb4b72430adf4cfceb7cc1 422 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 241.583 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 C3Y93_06645 02cbed20e7cb4b72430adf4cfceb7cc1 422 SUPERFAMILY SSF52540 90 370 4.81E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_06645 02cbed20e7cb4b72430adf4cfceb7cc1 422 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.1E-15 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 C3Y93_06645 02cbed20e7cb4b72430adf4cfceb7cc1 422 Gene3D G3DSA:1.10.720.10 1 46 4.1E-20 T 14-10-2018 C3Y93_06645 02cbed20e7cb4b72430adf4cfceb7cc1 422 SUPERFAMILY SSF68912 1 46 2.2E-11 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily C3Y93_06645 02cbed20e7cb4b72430adf4cfceb7cc1 422 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 4.5E-210 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 C3Y93_09300 fb92989188833ec1bd102532cb5b770f 626 ProSitePatterns PS00194 Thioredoxin family active site. 527 545 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3Y93_09300 fb92989188833ec1bd102532cb5b770f 626 Pfam PF00085 Thioredoxin 509 616 4.2E-8 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C3Y93_09300 fb92989188833ec1bd102532cb5b770f 626 Gene3D G3DSA:3.40.30.10 494 624 4.0E-25 T 14-10-2018 C3Y93_09300 fb92989188833ec1bd102532cb5b770f 626 SUPERFAMILY SSF52833 502 617 2.49E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_09300 fb92989188833ec1bd102532cb5b770f 626 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 229 430 1.0E-16 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 C3Y93_09300 fb92989188833ec1bd102532cb5b770f 626 SUPERFAMILY SSF74863 46 154 4.45E-27 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily C3Y93_09300 fb92989188833ec1bd102532cb5b770f 626 Pfam PF11412 Disulphide bond corrector protein DsbC 47 154 4.1E-26 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain C3Y93_09300 fb92989188833ec1bd102532cb5b770f 626 Gene3D G3DSA:2.60.40.1250 40 169 9.1E-32 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily C3Y93_05255 edf23510ee7ddf8d334b948759ed4e2d 402 Pfam PF01494 FAD binding domain 4 357 1.6E-38 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 C3Y93_05255 edf23510ee7ddf8d334b948759ed4e2d 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 4 399 5.9E-110 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 C3Y93_05255 edf23510ee7ddf8d334b948759ed4e2d 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 4.0E-20 T 14-10-2018 C3Y93_05255 edf23510ee7ddf8d334b948759ed4e2d 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 4.0E-20 T 14-10-2018 C3Y93_05255 edf23510ee7ddf8d334b948759ed4e2d 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 163 178 4.0E-20 T 14-10-2018 C3Y93_05255 edf23510ee7ddf8d334b948759ed4e2d 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 4.0E-20 T 14-10-2018 C3Y93_05255 edf23510ee7ddf8d334b948759ed4e2d 402 SUPERFAMILY SSF51905 4 392 4.61E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_05255 edf23510ee7ddf8d334b948759ed4e2d 402 Gene3D G3DSA:3.50.50.60 5 347 3.3E-97 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_05255 edf23510ee7ddf8d334b948759ed4e2d 402 Gene3D G3DSA:3.30.9.50 84 278 3.3E-97 T 14-10-2018 C3Y93_04575 ffde490b54e354195e4149b3e6d1a914 140 Pfam PF05717 IS66 Orf2 like protein 35 131 1.1E-29 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C3Y93_10185 6b3198f2233ff4e935f308f63a0d9175 386 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 10 381 4.3E-108 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase C3Y93_10185 6b3198f2233ff4e935f308f63a0d9175 386 Gene3D G3DSA:3.40.640.10 1 260 1.0E-89 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_10185 6b3198f2233ff4e935f308f63a0d9175 386 PIRSF PIRSF000390 1 386 9.8E-109 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase C3Y93_10185 6b3198f2233ff4e935f308f63a0d9175 386 SUPERFAMILY SSF53383 2 385 3.94E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_10185 6b3198f2233ff4e935f308f63a0d9175 386 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 2 385 8.7E-175 T 14-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase C3Y93_10185 6b3198f2233ff4e935f308f63a0d9175 386 Gene3D G3DSA:3.90.1150.10 261 386 1.7E-38 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_03270 6d995a573472c75c40c7e325107db76e 381 PIRSF PIRSF000267 2 380 6.4E-119 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 C3Y93_03270 6d995a573472c75c40c7e325107db76e 381 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 364 7.8E-105 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 C3Y93_03270 6d995a573472c75c40c7e325107db76e 381 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 381 1.5E-152 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 C3Y93_09645 b9e6592311491f6d982f3c6121398b85 448 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 14 448 6.6E-181 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 C3Y93_09645 b9e6592311491f6d982f3c6121398b85 448 SUPERFAMILY SSF55729 299 425 1.95E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3Y93_09645 b9e6592311491f6d982f3c6121398b85 448 SUPERFAMILY SSF53633 10 294 5.59E-67 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3Y93_09645 b9e6592311491f6d982f3c6121398b85 448 PIRSF PIRSF000423 4 448 3.2E-189 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 C3Y93_09645 b9e6592311491f6d982f3c6121398b85 448 Gene3D G3DSA:3.40.630.30 296 448 1.6E-36 T 14-10-2018 C3Y93_09645 b9e6592311491f6d982f3c6121398b85 448 Gene3D G3DSA:3.40.1160.10 12 295 5.0E-87 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3Y93_09645 b9e6592311491f6d982f3c6121398b85 448 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 448 201.282 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 C3Y93_09645 b9e6592311491f6d982f3c6121398b85 448 Pfam PF00583 Acetyltransferase (GNAT) family 320 408 2.3E-9 T 14-10-2018 IPR000182 GNAT domain C3Y93_09645 b9e6592311491f6d982f3c6121398b85 448 Pfam PF00696 Amino acid kinase family 31 226 1.4E-20 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 C3Y93_07780 dfe3f6956e59d64f3ac4cf9a6d3fadbc 106 Gene3D G3DSA:3.30.70.330 1 97 6.0E-33 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily C3Y93_07780 dfe3f6956e59d64f3ac4cf9a6d3fadbc 106 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 20.808 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 C3Y93_07780 dfe3f6956e59d64f3ac4cf9a6d3fadbc 106 Pfam PF00276 Ribosomal protein L23 9 93 2.2E-29 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 C3Y93_07780 dfe3f6956e59d64f3ac4cf9a6d3fadbc 106 SUPERFAMILY SSF54189 2 91 8.99E-31 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07535 2c61df9c91e275674345e9303cf3b293 269 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 259 19.8 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 C3Y93_07535 2c61df9c91e275674345e9303cf3b293 269 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 254 2.7E-78 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 C3Y93_07535 2c61df9c91e275674345e9303cf3b293 269 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 136 148 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 C3Y93_07535 2c61df9c91e275674345e9303cf3b293 269 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 259 1.9E-78 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 C3Y93_08265 eaf1b059033e323d571a7bfc7c56c0bc 176 ProSitePatterns PS01128 Shikimate kinase signature. 65 90 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 C3Y93_08265 eaf1b059033e323d571a7bfc7c56c0bc 176 Hamap MF_00109 Shikimate kinase [aroK]. 9 175 30.116 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 C3Y93_08265 eaf1b059033e323d571a7bfc7c56c0bc 176 Pfam PF01202 Shikimate kinase 18 174 2.6E-55 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 C3Y93_08265 eaf1b059033e323d571a7bfc7c56c0bc 176 PRINTS PR01100 Shikimate kinase family signature 82 91 3.2E-26 T 14-10-2018 C3Y93_08265 eaf1b059033e323d571a7bfc7c56c0bc 176 PRINTS PR01100 Shikimate kinase family signature 103 120 3.2E-26 T 14-10-2018 C3Y93_08265 eaf1b059033e323d571a7bfc7c56c0bc 176 PRINTS PR01100 Shikimate kinase family signature 64 72 3.2E-26 T 14-10-2018 C3Y93_08265 eaf1b059033e323d571a7bfc7c56c0bc 176 PRINTS PR01100 Shikimate kinase family signature 36 49 3.2E-26 T 14-10-2018 C3Y93_08265 eaf1b059033e323d571a7bfc7c56c0bc 176 PRINTS PR01100 Shikimate kinase family signature 12 27 3.2E-26 T 14-10-2018 C3Y93_08265 eaf1b059033e323d571a7bfc7c56c0bc 176 SUPERFAMILY SSF52540 11 173 9.71E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_08265 eaf1b059033e323d571a7bfc7c56c0bc 176 Gene3D G3DSA:3.40.50.300 3 175 2.4E-60 T 14-10-2018 C3Y93_08245 37a14d93e4c545be701cd6f115be0fe8 1493 Pfam PF00310 Glutamine amidotransferases class-II 25 439 2.5E-161 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain C3Y93_08245 37a14d93e4c545be701cd6f115be0fe8 1493 SUPERFAMILY SSF51395 461 1201 1.28E-245 T 14-10-2018 C3Y93_08245 37a14d93e4c545be701cd6f115be0fe8 1493 SUPERFAMILY SSF56235 25 443 1.62E-140 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3Y93_08245 37a14d93e4c545be701cd6f115be0fe8 1493 Gene3D G3DSA:3.60.20.10 25 558 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3Y93_08245 37a14d93e4c545be701cd6f115be0fe8 1493 Pfam PF04898 Glutamate synthase central domain 470 749 1.5E-105 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 C3Y93_08245 37a14d93e4c545be701cd6f115be0fe8 1493 Pfam PF01645 Conserved region in glutamate synthase 806 1167 1.1E-147 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 C3Y93_08245 37a14d93e4c545be701cd6f115be0fe8 1493 Gene3D G3DSA:2.160.20.60 1221 1491 6.8E-97 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 C3Y93_08245 37a14d93e4c545be701cd6f115be0fe8 1493 Gene3D G3DSA:3.20.20.70 496 1181 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_08245 37a14d93e4c545be701cd6f115be0fe8 1493 Gene3D G3DSA:3.20.20.70 444 804 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_08245 37a14d93e4c545be701cd6f115be0fe8 1493 Pfam PF01493 GXGXG motif 1248 1435 8.5E-77 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 C3Y93_08245 37a14d93e4c545be701cd6f115be0fe8 1493 SUPERFAMILY SSF69336 1223 1478 5.23E-88 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 C3Y93_08800 542ee98f9e69d49141e431395d6865c6 297 Gene3D G3DSA:3.40.190.10 86 285 2.6E-52 T 14-10-2018 C3Y93_08800 542ee98f9e69d49141e431395d6865c6 297 Gene3D G3DSA:1.10.10.10 1 84 8.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_08800 542ee98f9e69d49141e431395d6865c6 297 SUPERFAMILY SSF53850 86 293 1.52E-36 T 14-10-2018 C3Y93_08800 542ee98f9e69d49141e431395d6865c6 297 Gene3D G3DSA:3.40.190.10 168 265 2.6E-52 T 14-10-2018 C3Y93_08800 542ee98f9e69d49141e431395d6865c6 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.9E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_08800 542ee98f9e69d49141e431395d6865c6 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_08800 542ee98f9e69d49141e431395d6865c6 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_08800 542ee98f9e69d49141e431395d6865c6 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_08800 542ee98f9e69d49141e431395d6865c6 297 SUPERFAMILY SSF46785 2 80 1.1E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_08800 542ee98f9e69d49141e431395d6865c6 297 Pfam PF03466 LysR substrate binding domain 93 292 5.5E-22 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_09715 333f08d338a2faf028adad25636d5fa4 404 SUPERFAMILY SSF55174 327 402 3.53E-10 T 14-10-2018 C3Y93_09715 333f08d338a2faf028adad25636d5fa4 404 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 8 401 1.9E-114 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C3Y93_09715 333f08d338a2faf028adad25636d5fa4 404 SUPERFAMILY SSF52374 8 312 2.68E-96 T 14-10-2018 C3Y93_09715 333f08d338a2faf028adad25636d5fa4 404 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 5 402 45.427 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 C3Y93_09715 333f08d338a2faf028adad25636d5fa4 404 Pfam PF00579 tRNA synthetases class I (W and Y) 33 313 4.6E-79 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_09715 333f08d338a2faf028adad25636d5fa4 404 Gene3D G3DSA:1.10.240.10 222 328 6.7E-31 T 14-10-2018 C3Y93_09715 333f08d338a2faf028adad25636d5fa4 404 Gene3D G3DSA:3.40.50.620 6 221 2.0E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_09715 333f08d338a2faf028adad25636d5fa4 404 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 55 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_09715 333f08d338a2faf028adad25636d5fa4 404 Gene3D G3DSA:3.10.290.10 329 402 4.9E-8 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3Y93_09715 333f08d338a2faf028adad25636d5fa4 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 3.0E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C3Y93_09715 333f08d338a2faf028adad25636d5fa4 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 49 71 3.0E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C3Y93_09715 333f08d338a2faf028adad25636d5fa4 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 3.0E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C3Y93_09715 333f08d338a2faf028adad25636d5fa4 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 3.0E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C3Y93_11040 2a2051b0d3a57f82d935a556737c8dd1 108 Pfam PF00816 H-NS histone family 12 101 9.2E-21 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 C3Y93_11040 2a2051b0d3a57f82d935a556737c8dd1 108 SUPERFAMILY SSF81273 66 108 3.41E-11 T 14-10-2018 C3Y93_11040 2a2051b0d3a57f82d935a556737c8dd1 108 Gene3D G3DSA:4.10.430.10 58 108 6.3E-17 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 C3Y93_11040 2a2051b0d3a57f82d935a556737c8dd1 108 SMART SM00528 63 108 4.5E-15 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 C3Y93_10020 a3cfb00f3a26c155435a8e25e06f3cb3 281 Pfam PF00990 Diguanylate cyclase, GGDEF domain 116 274 5.5E-41 T 14-10-2018 IPR000160 GGDEF domain C3Y93_10020 a3cfb00f3a26c155435a8e25e06f3cb3 281 SMART SM00267 103 278 8.0E-42 T 14-10-2018 IPR000160 GGDEF domain C3Y93_10020 a3cfb00f3a26c155435a8e25e06f3cb3 281 SUPERFAMILY SSF55073 119 276 5.26E-42 T 14-10-2018 IPR029787 Nucleotide cyclase C3Y93_10020 a3cfb00f3a26c155435a8e25e06f3cb3 281 Gene3D G3DSA:3.30.70.270 104 278 4.9E-51 T 14-10-2018 C3Y93_10020 a3cfb00f3a26c155435a8e25e06f3cb3 281 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 114 276 2.1E-46 T 14-10-2018 IPR000160 GGDEF domain C3Y93_00460 13c44d2832c93a4d281ae42a7dcc8c32 309 Pfam PF03466 LysR substrate binding domain 90 296 1.8E-31 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_00460 13c44d2832c93a4d281ae42a7dcc8c32 309 Gene3D G3DSA:1.10.10.10 3 90 2.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_00460 13c44d2832c93a4d281ae42a7dcc8c32 309 SUPERFAMILY SSF46785 5 89 1.76E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_00460 13c44d2832c93a4d281ae42a7dcc8c32 309 SUPERFAMILY SSF53850 90 300 1.07E-33 T 14-10-2018 C3Y93_00460 13c44d2832c93a4d281ae42a7dcc8c32 309 Gene3D G3DSA:3.40.190.290 92 296 2.2E-44 T 14-10-2018 C3Y93_00460 13c44d2832c93a4d281ae42a7dcc8c32 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.0E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_12360 67227bf6a4ab6c5234e868e7b29b2ded 274 SMART SM00849 31 261 2.3E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_12360 67227bf6a4ab6c5234e868e7b29b2ded 274 SUPERFAMILY SSF56281 32 264 2.75E-29 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_12360 67227bf6a4ab6c5234e868e7b29b2ded 274 Pfam PF00753 Metallo-beta-lactamase superfamily 31 215 3.5E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_12360 67227bf6a4ab6c5234e868e7b29b2ded 274 Gene3D G3DSA:3.60.15.10 3 273 7.8E-53 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_06815 3c1ce7f188307e064f9d0ab3909efa7d 269 Pfam PF13413 Helix-turn-helix domain 30 90 7.0E-19 T 14-10-2018 C3Y93_06815 3c1ce7f188307e064f9d0ab3909efa7d 269 Pfam PF13464 Domain of unknown function (DUF4115) 196 267 9.8E-10 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 C3Y93_06815 3c1ce7f188307e064f9d0ab3909efa7d 269 Gene3D G3DSA:1.10.260.40 19 106 2.3E-22 T 14-10-2018 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 Pfam PF00330 Aconitase family (aconitate hydratase) 18 474 9.3E-160 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 12 482 59.116 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 13 482 2.6E-235 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 Gene3D G3DSA:3.30.499.20 15 302 1.3E-95 T 14-10-2018 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 SUPERFAMILY SSF53732 11 481 4.45E-164 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 ProSitePatterns PS01244 Aconitase family signature 2. 416 429 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 ProSitePatterns PS00450 Aconitase family signature 1. 355 371 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 PRINTS PR00415 Aconitase family signature 135 148 2.7E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 PRINTS PR00415 Aconitase family signature 416 429 2.7E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 PRINTS PR00415 Aconitase family signature 149 164 2.7E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 PRINTS PR00415 Aconitase family signature 225 238 2.7E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 PRINTS PR00415 Aconitase family signature 98 111 2.7E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 PRINTS PR00415 Aconitase family signature 124 132 2.7E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 PRINTS PR00415 Aconitase family signature 211 224 2.7E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 PRINTS PR00415 Aconitase family signature 302 316 2.7E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 PRINTS PR00415 Aconitase family signature 359 370 2.7E-45 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_11895 9d45eb552b9c26e33b9874f1cd25275a 482 Gene3D G3DSA:3.30.499.10 344 482 9.4E-50 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 C3Y93_13520 84e5b126b3a7244889daeff9c6764bd2 371 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 231 259 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 C3Y93_13520 84e5b126b3a7244889daeff9c6764bd2 371 Gene3D G3DSA:3.40.190.10 40 186 7.5E-16 T 14-10-2018 C3Y93_13520 84e5b126b3a7244889daeff9c6764bd2 371 Gene3D G3DSA:1.10.530.10 208 368 2.5E-34 T 14-10-2018 C3Y93_13520 84e5b126b3a7244889daeff9c6764bd2 371 SUPERFAMILY SSF53955 210 363 3.02E-32 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3Y93_13520 84e5b126b3a7244889daeff9c6764bd2 371 Pfam PF01464 Transglycosylase SLT domain 213 324 2.6E-22 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C3Y93_13520 84e5b126b3a7244889daeff9c6764bd2 371 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 58 134 3.9E-8 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF C3Y93_13520 84e5b126b3a7244889daeff9c6764bd2 371 SUPERFAMILY SSF53850 53 121 7.97E-8 T 14-10-2018 C3Y93_04705 1c97c8c29a0e21c3ede256b63ec0d65c 408 Pfam PF13356 Arm DNA-binding domain 8 99 8.1E-14 T 14-10-2018 IPR025166 Integrase, DNA-binding domain C3Y93_04705 1c97c8c29a0e21c3ede256b63ec0d65c 408 Gene3D G3DSA:1.10.150.130 99 210 4.6E-19 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C3Y93_04705 1c97c8c29a0e21c3ede256b63ec0d65c 408 Pfam PF00589 Phage integrase family 215 381 2.7E-15 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3Y93_04705 1c97c8c29a0e21c3ede256b63ec0d65c 408 Gene3D G3DSA:3.30.160.390 6 98 1.3E-22 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily C3Y93_04705 1c97c8c29a0e21c3ede256b63ec0d65c 408 SUPERFAMILY SSF56349 108 393 1.21E-51 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3Y93_04705 1c97c8c29a0e21c3ede256b63ec0d65c 408 Gene3D G3DSA:1.10.443.10 211 394 2.2E-14 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3Y93_14095 23c7d20723687b12cd24b1238d9701d2 259 SUPERFAMILY SSF56112 2 248 1.88E-35 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3Y93_14095 23c7d20723687b12cd24b1238d9701d2 259 Pfam PF01636 Phosphotransferase enzyme family 27 242 1.0E-14 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase C3Y93_14095 23c7d20723687b12cd24b1238d9701d2 259 Gene3D G3DSA:3.30.200.20 1 88 2.1E-24 T 14-10-2018 C3Y93_14095 23c7d20723687b12cd24b1238d9701d2 259 PIRSF PIRSF000706 1 259 1.3E-76 T 14-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 C3Y93_14095 23c7d20723687b12cd24b1238d9701d2 259 Gene3D G3DSA:3.90.1200.10 95 259 5.8E-32 T 14-10-2018 C3Y93_01835 a3ecf1bec04571f07ba2e81c3439f5e2 286 SUPERFAMILY SSF53474 4 269 7.14E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_01835 a3ecf1bec04571f07ba2e81c3439f5e2 286 Gene3D G3DSA:3.40.50.1820 5 282 1.5E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_01835 a3ecf1bec04571f07ba2e81c3439f5e2 286 Pfam PF12146 Serine aminopeptidase, S33 34 245 1.6E-11 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 C3Y93_01835 a3ecf1bec04571f07ba2e81c3439f5e2 286 PIRSF PIRSF037442 2 285 9.4E-71 T 14-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 C3Y93_11950 ea83482e6d714c7e087386e625ed60bc 372 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 32.918 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3Y93_11950 ea83482e6d714c7e087386e625ed60bc 372 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 1.9E-54 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3Y93_11950 ea83482e6d714c7e087386e625ed60bc 372 Gene3D G3DSA:3.30.360.10 135 350 1.8E-138 T 14-10-2018 C3Y93_11950 ea83482e6d714c7e087386e625ed60bc 372 Gene3D G3DSA:3.40.50.720 3 356 1.8E-138 T 14-10-2018 C3Y93_11950 ea83482e6d714c7e087386e625ed60bc 372 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 121 1.3E-23 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 C3Y93_11950 ea83482e6d714c7e087386e625ed60bc 372 SUPERFAMILY SSF55347 134 354 6.24E-75 T 14-10-2018 C3Y93_11950 ea83482e6d714c7e087386e625ed60bc 372 PIRSF PIRSF000148 1 371 1.4E-66 T 14-10-2018 C3Y93_11950 ea83482e6d714c7e087386e625ed60bc 372 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 367 1.8E-189 T 14-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3Y93_11950 ea83482e6d714c7e087386e625ed60bc 372 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3Y93_11950 ea83482e6d714c7e087386e625ed60bc 372 SUPERFAMILY SSF51735 1 147 1.36E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_11950 ea83482e6d714c7e087386e625ed60bc 372 SMART SM00859 2 122 1.7E-27 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 C3Y93_11565 9dcba168782bd5fcec56404253479da5 85 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 14-10-2018 IPR001455 TusA-like domain C3Y93_11565 9dcba168782bd5fcec56404253479da5 85 SUPERFAMILY SSF64307 6 85 7.72E-21 T 14-10-2018 IPR036868 TusA-like domain superfamily C3Y93_11565 9dcba168782bd5fcec56404253479da5 85 Gene3D G3DSA:3.30.110.40 2 85 1.9E-25 T 14-10-2018 IPR036868 TusA-like domain superfamily C3Y93_11565 9dcba168782bd5fcec56404253479da5 85 Pfam PF01206 Sulfurtransferase TusA 10 84 6.4E-22 T 14-10-2018 IPR001455 TusA-like domain C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 SMART SM00388 804 869 2.0E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 PRINTS PR00344 Bacterial sensor protein C-terminal signature 987 1005 3.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 PRINTS PR00344 Bacterial sensor protein C-terminal signature 952 966 3.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1011 1024 3.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 Gene3D G3DSA:3.40.50.2300 1040 1158 3.2E-17 T 14-10-2018 C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 SUPERFAMILY SSF55785 644 764 3.95E-9 T 14-10-2018 IPR035965 PAS domain superfamily C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 Pfam PF12860 PAS fold 657 770 9.3E-44 T 14-10-2018 C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 Gene3D G3DSA:3.30.450.20 639 769 3.1E-12 T 14-10-2018 C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 914 1024 3.9E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 Pfam PF00512 His Kinase A (phospho-acceptor) domain 804 869 2.9E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 Gene3D G3DSA:3.30.565.10 868 1028 7.4E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 Pfam PF00072 Response regulator receiver domain 1048 1153 7.2E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 SUPERFAMILY SSF52172 1046 1156 1.57E-15 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 SMART SM00448 1046 1155 5.7E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 SMART SM00387 913 1027 7.5E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 SUPERFAMILY SSF55874 860 1027 2.1E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 SUPERFAMILY SSF47384 792 869 1.16E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3Y93_10415 b4082d7c7f630534e6713788e1278050 1163 Gene3D G3DSA:1.10.287.130 770 867 1.7E-11 T 14-10-2018 C3Y93_10965 8df00a3ed791e214cb3bdf14e46f73f0 268 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 12 254 36.038 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 C3Y93_10965 8df00a3ed791e214cb3bdf14e46f73f0 268 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 204 254 6.0E-11 T 14-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 C3Y93_10965 8df00a3ed791e214cb3bdf14e46f73f0 268 Pfam PF00149 Calcineurin-like phosphoesterase 13 200 1.3E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C3Y93_10965 8df00a3ed791e214cb3bdf14e46f73f0 268 SUPERFAMILY SSF56300 13 265 5.93E-57 T 14-10-2018 C3Y93_10965 8df00a3ed791e214cb3bdf14e46f73f0 268 Gene3D G3DSA:3.60.21.10 2 266 1.5E-64 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C3Y93_03605 cf726f8f3333d5e1deb6d661b32eb9bf 296 SUPERFAMILY SSF53850 90 292 4.52E-24 T 14-10-2018 C3Y93_03605 cf726f8f3333d5e1deb6d661b32eb9bf 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_03605 cf726f8f3333d5e1deb6d661b32eb9bf 296 SUPERFAMILY SSF46785 2 81 1.14E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_03605 cf726f8f3333d5e1deb6d661b32eb9bf 296 Pfam PF03466 LysR substrate binding domain 89 290 9.6E-20 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_03605 cf726f8f3333d5e1deb6d661b32eb9bf 296 Gene3D G3DSA:3.40.190.290 95 292 9.5E-26 T 14-10-2018 C3Y93_03605 cf726f8f3333d5e1deb6d661b32eb9bf 296 Gene3D G3DSA:1.10.10.10 1 87 3.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_00590 4f7f7f662160c518ac98af5d679aaabe 426 SUPERFAMILY SSF53633 4 255 2.62E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3Y93_00590 4f7f7f662160c518ac98af5d679aaabe 426 Pfam PF13840 ACT domain 351 410 2.5E-17 T 14-10-2018 IPR027795 CASTOR, ACT domain C3Y93_00590 4f7f7f662160c518ac98af5d679aaabe 426 Gene3D G3DSA:3.30.2130.10 256 423 2.7E-59 T 14-10-2018 C3Y93_00590 4f7f7f662160c518ac98af5d679aaabe 426 Pfam PF01842 ACT domain 279 336 6.0E-10 T 14-10-2018 IPR002912 ACT domain C3Y93_00590 4f7f7f662160c518ac98af5d679aaabe 426 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3Y93_00590 4f7f7f662160c518ac98af5d679aaabe 426 Gene3D G3DSA:3.40.1160.10 1 255 5.3E-88 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3Y93_00590 4f7f7f662160c518ac98af5d679aaabe 426 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 414 5.1E-131 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3Y93_00590 4f7f7f662160c518ac98af5d679aaabe 426 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 59 414 2.5E-111 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3Y93_00590 4f7f7f662160c518ac98af5d679aaabe 426 PIRSF PIRSF000726 1 62 1.0E-20 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3Y93_00590 4f7f7f662160c518ac98af5d679aaabe 426 PIRSF PIRSF000726 53 422 1.4E-135 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C3Y93_00590 4f7f7f662160c518ac98af5d679aaabe 426 SUPERFAMILY SSF55021 340 416 5.07E-25 T 14-10-2018 C3Y93_00590 4f7f7f662160c518ac98af5d679aaabe 426 SUPERFAMILY SSF55021 260 338 3.14E-17 T 14-10-2018 C3Y93_00590 4f7f7f662160c518ac98af5d679aaabe 426 Pfam PF00696 Amino acid kinase family 3 229 1.1E-52 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 C3Y93_03395 dcfa69fb15b87d3904716d27c21d4532 285 SUPERFAMILY SSF51569 8 281 2.01E-99 T 14-10-2018 C3Y93_03395 dcfa69fb15b87d3904716d27c21d4532 285 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 22 277 1.1E-113 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C3Y93_03395 dcfa69fb15b87d3904716d27c21d4532 285 Gene3D G3DSA:3.20.20.70 3 285 2.4E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_03395 dcfa69fb15b87d3904716d27c21d4532 285 Pfam PF00793 DAHP synthetase I family 14 276 2.8E-71 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C3Y93_03395 dcfa69fb15b87d3904716d27c21d4532 285 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 17 279 48.177 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C3Y93_05195 5371014fbfb191d270db2ff1bed8000d 356 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 141 349 1.9E-31 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3Y93_05195 5371014fbfb191d270db2ff1bed8000d 356 SUPERFAMILY SSF161098 117 335 4.97E-15 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_05195 5371014fbfb191d270db2ff1bed8000d 356 Gene3D G3DSA:1.10.3720.10 111 345 1.3E-19 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_09585 b698bc3cf2c5d146b95d45113894ef08 199 Gene3D G3DSA:3.40.80.10 8 190 1.9E-58 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 C3Y93_09585 b698bc3cf2c5d146b95d45113894ef08 199 SUPERFAMILY SSF55846 10 185 2.49E-64 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 C3Y93_09585 b698bc3cf2c5d146b95d45113894ef08 199 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 32 173 2.0E-27 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 C3Y93_09585 b698bc3cf2c5d146b95d45113894ef08 199 SMART SM00644 22 172 5.9E-43 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 C3Y93_07855 40fb32803cecb4a82ac41a337d0e89ff 681 Pfam PF17191 RecG wedge domain 6 163 1.6E-19 T 14-10-2018 IPR033454 RecG, wedge domain C3Y93_07855 40fb32803cecb4a82ac41a337d0e89ff 681 SMART SM00490 493 577 1.1E-19 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_07855 40fb32803cecb4a82ac41a337d0e89ff 681 Gene3D G3DSA:3.40.50.300 198 439 7.5E-83 T 14-10-2018 C3Y93_07855 40fb32803cecb4a82ac41a337d0e89ff 681 SUPERFAMILY SSF52540 198 442 2.57E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_07855 40fb32803cecb4a82ac41a337d0e89ff 681 Gene3D G3DSA:3.40.50.300 446 618 5.3E-54 T 14-10-2018 C3Y93_07855 40fb32803cecb4a82ac41a337d0e89ff 681 Pfam PF00271 Helicase conserved C-terminal domain 466 576 2.9E-17 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_07855 40fb32803cecb4a82ac41a337d0e89ff 681 SUPERFAMILY SSF52540 282 639 3.55E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_07855 40fb32803cecb4a82ac41a337d0e89ff 681 Gene3D G3DSA:2.40.50.140 40 134 1.8E-7 T 14-10-2018 C3Y93_07855 40fb32803cecb4a82ac41a337d0e89ff 681 Pfam PF00270 DEAD/DEAH box helicase 266 422 1.8E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C3Y93_07855 40fb32803cecb4a82ac41a337d0e89ff 681 SUPERFAMILY SSF50249 4 166 3.6E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_07855 40fb32803cecb4a82ac41a337d0e89ff 681 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 22 652 5.3E-228 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 C3Y93_07855 40fb32803cecb4a82ac41a337d0e89ff 681 SMART SM00487 255 448 8.4E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3Y93_08475 bbaa61e963946981202c79207b9e2354 316 Pfam PF01636 Phosphotransferase enzyme family 28 239 1.1E-22 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase C3Y93_08475 bbaa61e963946981202c79207b9e2354 316 SUPERFAMILY SSF56112 5 313 4.52E-57 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3Y93_08475 bbaa61e963946981202c79207b9e2354 316 Gene3D G3DSA:3.30.200.20 1 101 3.7E-21 T 14-10-2018 C3Y93_08475 bbaa61e963946981202c79207b9e2354 316 Hamap MF_00301 Homoserine kinase [thrB]. 1 316 93.313 T 14-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 C3Y93_08475 bbaa61e963946981202c79207b9e2354 316 Gene3D G3DSA:3.90.1200.10 105 314 1.4E-53 T 14-10-2018 C3Y93_07665 174dec7e6aa665ce3bb09b4a9912e41d 335 Gene3D G3DSA:2.170.120.12 53 175 3.5E-79 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_07665 174dec7e6aa665ce3bb09b4a9912e41d 335 Gene3D G3DSA:1.10.150.20 243 327 2.4E-37 T 14-10-2018 C3Y93_07665 174dec7e6aa665ce3bb09b4a9912e41d 335 SUPERFAMILY SSF56553 53 176 4.84E-36 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_07665 174dec7e6aa665ce3bb09b4a9912e41d 335 SUPERFAMILY SSF47789 249 322 6.54E-26 T 14-10-2018 C3Y93_07665 174dec7e6aa665ce3bb09b4a9912e41d 335 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 315 34.538 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_07665 174dec7e6aa665ce3bb09b4a9912e41d 335 Gene3D G3DSA:3.30.1360.10 17 225 3.5E-79 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_07665 174dec7e6aa665ce3bb09b4a9912e41d 335 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 225 9.1E-24 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_07665 174dec7e6aa665ce3bb09b4a9912e41d 335 SMART SM00662 23 232 9.2E-87 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_07665 174dec7e6aa665ce3bb09b4a9912e41d 335 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 314 5.8E-105 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_07665 174dec7e6aa665ce3bb09b4a9912e41d 335 SUPERFAMILY SSF55257 6 231 3.63E-31 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_07665 174dec7e6aa665ce3bb09b4a9912e41d 335 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 154 9.6E-21 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_07665 174dec7e6aa665ce3bb09b4a9912e41d 335 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 7.0E-35 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_07665 174dec7e6aa665ce3bb09b4a9912e41d 335 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 306 4.8E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_03275 2a0e172f71a31847f97d26c4cec1d210 33 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 27 1.2E-13 T 14-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 C3Y93_03275 2a0e172f71a31847f97d26c4cec1d210 33 Pfam PF08173 Membrane bound YbgT-like protein 1 26 4.9E-12 T 14-10-2018 IPR012994 Membrane bound YbgT-like C3Y93_12625 0a9dd0aa60b89c241a2332bcefc3aa07 345 Gene3D G3DSA:3.40.50.150 150 343 7.8E-40 T 14-10-2018 C3Y93_12625 0a9dd0aa60b89c241a2332bcefc3aa07 345 Pfam PF05175 Methyltransferase small domain 165 333 2.2E-52 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 C3Y93_12625 0a9dd0aa60b89c241a2332bcefc3aa07 345 Pfam PF08468 Methyltransferase small domain N-terminal 5 156 7.1E-44 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 C3Y93_12625 0a9dd0aa60b89c241a2332bcefc3aa07 345 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 266 272 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3Y93_12625 0a9dd0aa60b89c241a2332bcefc3aa07 345 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 1 337 38.711 T 14-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 C3Y93_12625 0a9dd0aa60b89c241a2332bcefc3aa07 345 Gene3D G3DSA:3.40.50.150 1 149 2.9E-40 T 14-10-2018 C3Y93_12625 0a9dd0aa60b89c241a2332bcefc3aa07 345 SUPERFAMILY SSF53335 149 315 4.67E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_01920 1de008b21fef478b61dff97de54c16b5 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 451 8.0E-113 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 C3Y93_01920 1de008b21fef478b61dff97de54c16b5 451 SMART SM00228 116 187 0.045 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3Y93_01920 1de008b21fef478b61dff97de54c16b5 451 SMART SM00228 209 278 1.1E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3Y93_01920 1de008b21fef478b61dff97de54c16b5 451 Pfam PF02163 Peptidase family M50 10 436 1.4E-77 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 C3Y93_01920 1de008b21fef478b61dff97de54c16b5 451 SUPERFAMILY SSF50156 89 195 5.65E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3Y93_01920 1de008b21fef478b61dff97de54c16b5 451 Gene3D G3DSA:2.30.42.10 219 307 1.8E-15 T 14-10-2018 C3Y93_01920 1de008b21fef478b61dff97de54c16b5 451 Gene3D G3DSA:2.30.42.10 127 218 1.4E-19 T 14-10-2018 C3Y93_01920 1de008b21fef478b61dff97de54c16b5 451 Pfam PF13180 PDZ domain 127 194 4.9E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3Y93_01920 1de008b21fef478b61dff97de54c16b5 451 Pfam PF13180 PDZ domain 221 285 1.1E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3Y93_01920 1de008b21fef478b61dff97de54c16b5 451 SUPERFAMILY SSF50156 201 288 8.41E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3Y93_05945 128b0afe8cdd60ee2d5d2e49c964bd4c 469 Pfam PF00324 Amino acid permease 34 459 4.1E-110 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 C3Y93_05945 128b0afe8cdd60ee2d5d2e49c964bd4c 469 PIRSF PIRSF006060 18 468 3.2E-79 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 C3Y93_05945 128b0afe8cdd60ee2d5d2e49c964bd4c 469 Gene3D G3DSA:1.20.1740.10 26 468 3.3E-64 T 14-10-2018 C3Y93_05945 128b0afe8cdd60ee2d5d2e49c964bd4c 469 ProSitePatterns PS00218 Amino acid permeases signature. 59 89 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 C3Y93_05955 d9933daeda96af137adb53143dc23002 338 Gene3D G3DSA:3.40.190.10 29 298 2.8E-113 T 14-10-2018 C3Y93_05955 d9933daeda96af137adb53143dc23002 338 Gene3D G3DSA:3.40.190.10 122 330 2.8E-113 T 14-10-2018 C3Y93_05955 d9933daeda96af137adb53143dc23002 338 Pfam PF13343 Bacterial extracellular solute-binding protein 74 297 8.6E-23 T 14-10-2018 C3Y93_05955 d9933daeda96af137adb53143dc23002 338 PIRSF PIRSF002825 6 338 4.4E-75 T 14-10-2018 IPR026045 Ferric binding protein C3Y93_05955 d9933daeda96af137adb53143dc23002 338 SUPERFAMILY SSF53850 26 334 7.41E-71 T 14-10-2018 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 SMART SM00387 45 189 2.5E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 19 818 6.4E-301 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 SMART SM00433 49 816 5.5E-268 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 46 188 7.2E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 752 812 2.5E-30 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 Gene3D G3DSA:3.30.230.10 233 411 1.0E-71 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 SUPERFAMILY SSF54211 234 405 1.82E-59 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 Pfam PF01751 Toprim domain 432 544 3.9E-17 T 14-10-2018 IPR006171 TOPRIM domain C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 Gene3D G3DSA:3.40.50.670 716 821 9.7E-27 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 Pfam PF00204 DNA gyrase B 234 403 2.5E-61 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 Gene3D G3DSA:3.10.20.690 605 702 2.2E-6 T 14-10-2018 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 SUPERFAMILY SSF55874 19 231 6.94E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 SUPERFAMILY SSF56719 407 817 1.65E-86 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR00418 DNA topoisomerase II family signature 518 535 1.8E-71 T 14-10-2018 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR00418 DNA topoisomerase II family signature 433 447 1.8E-71 T 14-10-2018 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR00418 DNA topoisomerase II family signature 500 516 1.8E-71 T 14-10-2018 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR00418 DNA topoisomerase II family signature 755 771 1.8E-71 T 14-10-2018 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR00418 DNA topoisomerase II family signature 49 64 1.8E-71 T 14-10-2018 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR00418 DNA topoisomerase II family signature 84 97 1.8E-71 T 14-10-2018 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR00418 DNA topoisomerase II family signature 281 294 1.8E-71 T 14-10-2018 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR00418 DNA topoisomerase II family signature 538 550 1.8E-71 T 14-10-2018 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR00418 DNA topoisomerase II family signature 127 141 1.8E-71 T 14-10-2018 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 Gene3D G3DSA:3.30.565.10 15 232 2.1E-92 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR01159 DNA gyrase subunit B signature 776 788 3.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR01159 DNA gyrase subunit B signature 19 29 3.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR01159 DNA gyrase subunit B signature 483 492 3.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR01159 DNA gyrase subunit B signature 325 341 3.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR01159 DNA gyrase subunit B signature 792 808 3.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR01159 DNA gyrase subunit B signature 194 209 3.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR01159 DNA gyrase subunit B signature 209 222 3.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR01159 DNA gyrase subunit B signature 255 273 3.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR01159 DNA gyrase subunit B signature 387 407 3.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 PRINTS PR01159 DNA gyrase subunit B signature 373 387 3.5E-72 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 ProSitePatterns PS00177 DNA topoisomerase II signature. 435 443 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 Gene3D G3DSA:3.40.50.670 412 600 5.6E-72 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3Y93_09750 f95efd121998362d18d2fa56764397b8 822 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 16 822 100.704 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_10610 f4d10deb914527f6c12170fde5e2c863 302 Pfam PF00892 EamA-like transporter family 10 144 4.9E-26 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_10610 f4d10deb914527f6c12170fde5e2c863 302 Pfam PF00892 EamA-like transporter family 159 289 1.0E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_10610 f4d10deb914527f6c12170fde5e2c863 302 SUPERFAMILY SSF103481 195 293 5.49E-12 T 14-10-2018 C3Y93_10610 f4d10deb914527f6c12170fde5e2c863 302 SUPERFAMILY SSF103481 44 147 3.79E-15 T 14-10-2018 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 Pfam PF01138 3' exoribonuclease family, domain 1 18 145 7.5E-19 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 Pfam PF01138 3' exoribonuclease family, domain 1 326 458 1.2E-19 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 SUPERFAMILY SSF46915 240 323 4.97E-17 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 2.0E-13 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 Pfam PF03725 3' exoribonuclease family, domain 2 461 530 6.9E-6 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 SMART SM00322 554 619 2.8E-13 T 14-10-2018 IPR004087 K Homology domain GO:0003676 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 Gene3D G3DSA:3.30.1370.10 552 622 1.2E-19 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 SMART SM00316 622 692 1.4E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 Pfam PF00575 S1 RNA binding domain 621 692 5.0E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 SUPERFAMILY SSF54791 558 642 1.67E-22 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 Gene3D G3DSA:3.30.230.70 1 230 1.4E-74 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 Gene3D G3DSA:2.40.50.140 623 696 9.4E-29 T 14-10-2018 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 SUPERFAMILY SSF55666 146 235 3.93E-29 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 Gene3D G3DSA:3.30.230.70 233 551 3.9E-111 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 SUPERFAMILY SSF54211 296 490 1.21E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 322 8.7E-21 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 Pfam PF00013 KH domain 559 615 1.7E-12 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 SUPERFAMILY SSF54211 3 145 6.07E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 695 29.703 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 SUPERFAMILY SSF55666 452 550 1.12E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 SUPERFAMILY SSF50249 622 695 1.4E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_11500 c8fd68879028b6e70b8f49dd17639873 697 PIRSF PIRSF005499 3 697 2.8E-284 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 C3Y93_03235 087a8b733d4c4b368c200b7f4ab796f2 979 SUPERFAMILY SSF63411 522 770 7.65E-51 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3Y93_03235 087a8b733d4c4b368c200b7f4ab796f2 979 Gene3D G3DSA:3.30.830.10 499 950 2.3E-108 T 14-10-2018 C3Y93_03235 087a8b733d4c4b368c200b7f4ab796f2 979 SUPERFAMILY SSF63411 792 978 4.78E-40 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3Y93_03235 087a8b733d4c4b368c200b7f4ab796f2 979 SMART SM01264 466 715 3.6E-76 T 14-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 C3Y93_03235 087a8b733d4c4b368c200b7f4ab796f2 979 Gene3D G3DSA:3.30.830.10 260 488 1.7E-51 T 14-10-2018 C3Y93_03235 087a8b733d4c4b368c200b7f4ab796f2 979 Gene3D G3DSA:3.30.830.10 3 255 9.4E-82 T 14-10-2018 C3Y93_03235 087a8b733d4c4b368c200b7f4ab796f2 979 Pfam PF05193 Peptidase M16 inactive domain 208 391 2.1E-9 T 14-10-2018 IPR007863 Peptidase M16, C-terminal C3Y93_03235 087a8b733d4c4b368c200b7f4ab796f2 979 Pfam PF08367 Peptidase M16C associated 466 715 4.2E-56 T 14-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 C3Y93_03235 087a8b733d4c4b368c200b7f4ab796f2 979 Pfam PF00675 Insulinase (Peptidase family M16) 63 153 1.7E-7 T 14-10-2018 IPR011765 Peptidase M16, N-terminal C3Y93_03235 087a8b733d4c4b368c200b7f4ab796f2 979 SUPERFAMILY SSF63411 20 246 1.38E-42 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3Y93_03235 087a8b733d4c4b368c200b7f4ab796f2 979 SUPERFAMILY SSF63411 262 523 3.67E-50 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3Y93_03235 087a8b733d4c4b368c200b7f4ab796f2 979 Gene3D G3DSA:3.30.830.10 530 787 2.3E-108 T 14-10-2018 C3Y93_00600 9474e65407a5553cf1fa93fb5abefae7 344 SMART SM00846 2 162 2.7E-73 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00600 9474e65407a5553cf1fa93fb5abefae7 344 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 160 167 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00600 9474e65407a5553cf1fa93fb5abefae7 344 Gene3D G3DSA:3.40.50.720 3 336 1.3E-126 T 14-10-2018 C3Y93_00600 9474e65407a5553cf1fa93fb5abefae7 344 Gene3D G3DSA:3.30.360.10 161 324 1.3E-126 T 14-10-2018 C3Y93_00600 9474e65407a5553cf1fa93fb5abefae7 344 PIRSF PIRSF000149 1 344 7.6E-116 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00600 9474e65407a5553cf1fa93fb5abefae7 344 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 167 322 1.6E-48 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00600 9474e65407a5553cf1fa93fb5abefae7 344 SUPERFAMILY SSF55347 162 323 1.9E-54 T 14-10-2018 C3Y93_00600 9474e65407a5553cf1fa93fb5abefae7 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 183 199 3.7E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00600 9474e65407a5553cf1fa93fb5abefae7 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 239 256 3.7E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00600 9474e65407a5553cf1fa93fb5abefae7 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 279 294 3.7E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00600 9474e65407a5553cf1fa93fb5abefae7 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 119 132 3.7E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00600 9474e65407a5553cf1fa93fb5abefae7 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 156 174 3.7E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00600 9474e65407a5553cf1fa93fb5abefae7 344 SUPERFAMILY SSF51735 2 190 4.12E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_00600 9474e65407a5553cf1fa93fb5abefae7 344 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 112 6.2E-35 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03740 452db6652fc55f02b6f796586c30d678 356 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 44 223 7.8E-34 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal C3Y93_03740 452db6652fc55f02b6f796586c30d678 356 Gene3D G3DSA:1.10.10.60 244 355 3.0E-24 T 14-10-2018 C3Y93_03740 452db6652fc55f02b6f796586c30d678 356 Pfam PF12833 Helix-turn-helix domain 275 351 5.0E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_03740 452db6652fc55f02b6f796586c30d678 356 SMART SM00342 267 350 1.8E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_03740 452db6652fc55f02b6f796586c30d678 356 SUPERFAMILY SSF46689 303 351 1.61E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 SUPERFAMILY SSF53732 22 589 4.58E-185 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 PRINTS PR00415 Aconitase family signature 162 170 6.0E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 PRINTS PR00415 Aconitase family signature 281 294 6.0E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 PRINTS PR00415 Aconitase family signature 205 220 6.0E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 PRINTS PR00415 Aconitase family signature 403 414 6.0E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 PRINTS PR00415 Aconitase family signature 267 280 6.0E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 PRINTS PR00415 Aconitase family signature 191 204 6.0E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 PRINTS PR00415 Aconitase family signature 360 374 6.0E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 PRINTS PR00415 Aconitase family signature 138 151 6.0E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 PRINTS PR00415 Aconitase family signature 465 478 6.0E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 864 0.0 T 14-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 Gene3D G3DSA:3.30.499.10 361 562 2.0E-76 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 Pfam PF00330 Aconitase family (aconitate hydratase) 67 534 5.4E-144 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 Gene3D G3DSA:3.20.19.10 619 863 4.8E-82 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 Gene3D G3DSA:3.30.499.20 4 360 3.1E-129 T 14-10-2018 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 SUPERFAMILY SSF52016 599 862 8.83E-67 T 14-10-2018 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 Pfam PF00694 Aconitase C-terminal domain 657 789 3.4E-30 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 C3Y93_12675 24c04974d7a55a8d12a1bff115fa3f7c 868 Gene3D G3DSA:1.10.1440.20 563 618 3.7E-9 T 14-10-2018 C3Y93_09190 ab2a089686ef75ad742708360dd098b5 900 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 880 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 C3Y93_09190 ab2a089686ef75ad742708360dd098b5 900 PIRSF PIRSF000156 2 884 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 C3Y93_09190 ab2a089686ef75ad742708360dd098b5 900 Gene3D G3DSA:3.40.50.970 53 467 1.8E-134 T 14-10-2018 C3Y93_09190 ab2a089686ef75ad742708360dd098b5 900 SUPERFAMILY SSF52922 697 879 2.62E-49 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3Y93_09190 ab2a089686ef75ad742708360dd098b5 900 SUPERFAMILY SSF52518 469 695 1.3E-95 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3Y93_09190 ab2a089686ef75ad742708360dd098b5 900 SUPERFAMILY SSF52518 54 464 8.76E-138 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3Y93_09190 ab2a089686ef75ad742708360dd098b5 900 Gene3D G3DSA:3.40.50.970 468 701 1.7E-107 T 14-10-2018 C3Y93_09190 ab2a089686ef75ad742708360dd098b5 900 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 132 293 1.1E-8 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3Y93_09190 ab2a089686ef75ad742708360dd098b5 900 Gene3D G3DSA:3.40.50.920 702 883 4.4E-65 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3Y93_06480 2c9c22ce62ef9e2df54357e05555c5f7 277 Pfam PF03412 Peptidase C39 family 63 197 2.2E-15 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 C3Y93_06480 2c9c22ce62ef9e2df54357e05555c5f7 277 Gene3D G3DSA:3.90.70.10 51 207 3.2E-29 T 14-10-2018 C3Y93_07505 dcd5ec13a63f69db1d13e2759fa4cdf4 211 Hamap MF_01405 dITP/XTP pyrophosphatase. 10 208 48.047 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 C3Y93_07505 dcd5ec13a63f69db1d13e2759fa4cdf4 211 Gene3D G3DSA:3.90.950.10 7 210 1.2E-70 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C3Y93_07505 dcd5ec13a63f69db1d13e2759fa4cdf4 211 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 12 206 7.0E-56 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 C3Y93_07505 dcd5ec13a63f69db1d13e2759fa4cdf4 211 SUPERFAMILY SSF52972 8 206 1.28E-67 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C3Y93_07505 dcd5ec13a63f69db1d13e2759fa4cdf4 211 Pfam PF01725 Ham1 family 12 203 2.2E-54 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 720 5.7E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 5.7E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 5.7E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 617 5.7E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 291 303 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 Gene3D G3DSA:1.10.8.60 764 858 1.4E-27 T 14-10-2018 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 66 0.0015 T 14-10-2018 IPR004176 Clp, N-terminal C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 92 142 4.9E-8 T 14-10-2018 IPR004176 Clp, N-terminal C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 SUPERFAMILY SSF52540 157 543 3.64E-97 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 SMART SM00382 195 340 1.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 SMART SM00382 595 737 1.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 Gene3D G3DSA:3.40.50.300 345 542 1.3E-65 T 14-10-2018 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 Gene3D G3DSA:3.40.50.300 548 762 3.4E-88 T 14-10-2018 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 200 331 9.1E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 SUPERFAMILY SSF81923 4 153 2.75E-34 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 SMART SM01086 764 853 1.0E-35 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 629 647 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 Gene3D G3DSA:3.40.50.300 155 344 1.4E-74 T 14-10-2018 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 764 843 1.6E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 SUPERFAMILY SSF52540 544 849 2.39E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 Gene3D G3DSA:1.10.1780.10 1 145 2.6E-27 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 C3Y93_00645 65835d8cbe963af5f75233c6b8d24731 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 594 757 2.7E-56 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3Y93_02135 b38393be0b36ce2cbe1dad2c7f4781b4 623 Pfam PF13616 PPIC-type PPIASE domain 254 361 2.5E-26 T 14-10-2018 C3Y93_02135 b38393be0b36ce2cbe1dad2c7f4781b4 623 Pfam PF13624 SurA N-terminal domain 1 158 1.4E-37 T 14-10-2018 C3Y93_02135 b38393be0b36ce2cbe1dad2c7f4781b4 623 SUPERFAMILY SSF54534 268 361 7.85E-23 T 14-10-2018 C3Y93_02135 b38393be0b36ce2cbe1dad2c7f4781b4 623 Gene3D G3DSA:1.10.4030.30 39 195 7.9E-13 T 14-10-2018 C3Y93_02135 b38393be0b36ce2cbe1dad2c7f4781b4 623 Gene3D G3DSA:3.10.50.40 261 364 4.5E-26 T 14-10-2018 C3Y93_02135 b38393be0b36ce2cbe1dad2c7f4781b4 623 SUPERFAMILY SSF109998 40 237 9.61E-23 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily C3Y93_01895 209ece5999bdf65c97716796f8cf5507 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.6E-93 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 C3Y93_01895 209ece5999bdf65c97716796f8cf5507 242 Gene3D G3DSA:3.40.1160.10 2 242 1.8E-66 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3Y93_01895 209ece5999bdf65c97716796f8cf5507 242 SUPERFAMILY SSF53633 7 241 1.96E-63 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3Y93_01895 209ece5999bdf65c97716796f8cf5507 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 241 41.266 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 C3Y93_01895 209ece5999bdf65c97716796f8cf5507 242 Pfam PF00696 Amino acid kinase family 11 220 3.9E-24 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 C3Y93_01895 209ece5999bdf65c97716796f8cf5507 242 PIRSF PIRSF005650 4 242 3.4E-84 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 C3Y93_00585 61e046b2645f591f5aa75b6d4daabf46 84 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-20 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 C3Y93_00585 61e046b2645f591f5aa75b6d4daabf46 84 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 2.3E-29 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 C3Y93_00585 61e046b2645f591f5aa75b6d4daabf46 84 Gene3D G3DSA:3.30.70.1680 1 59 1.2E-28 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 C3Y93_00585 61e046b2645f591f5aa75b6d4daabf46 84 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 64 17.498 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 C3Y93_00585 61e046b2645f591f5aa75b6d4daabf46 84 SUPERFAMILY SSF117130 1 54 3.4E-20 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 C3Y93_00585 61e046b2645f591f5aa75b6d4daabf46 84 Pfam PF02599 Global regulator protein family 1 52 1.0E-26 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 C3Y93_12180 0404536502366e5cc210a8d3fda2f588 274 Gene3D G3DSA:1.20.120.1760 31 184 8.1E-14 T 14-10-2018 C3Y93_12180 0404536502366e5cc210a8d3fda2f588 274 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 52 216 7.9E-40 T 14-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 C3Y93_12180 0404536502366e5cc210a8d3fda2f588 274 Pfam PF01066 CDP-alcohol phosphatidyltransferase 45 108 8.4E-14 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 C3Y93_12180 0404536502366e5cc210a8d3fda2f588 274 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 86 108 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 C3Y93_13655 a77dd9b8d6afe39eb6abdc0ded5b6f0b 93 SUPERFAMILY SSF47413 9 89 7.72E-25 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_13655 a77dd9b8d6afe39eb6abdc0ded5b6f0b 93 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 4 80 8.8E-28 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 C3Y93_13655 a77dd9b8d6afe39eb6abdc0ded5b6f0b 93 SMART SM00530 13 66 2.0E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_13655 a77dd9b8d6afe39eb6abdc0ded5b6f0b 93 Pfam PF01381 Helix-turn-helix 22 65 4.9E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_13655 a77dd9b8d6afe39eb6abdc0ded5b6f0b 93 Gene3D G3DSA:1.10.260.40 1 93 3.5E-31 T 14-10-2018 C3Y93_02095 245c30ae4f3ac2c0dcad8c43a5c2bf3e 171 Gene3D G3DSA:1.10.287.110 1 74 3.3E-16 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C3Y93_02095 245c30ae4f3ac2c0dcad8c43a5c2bf3e 171 Pfam PF00226 DnaJ domain 11 65 2.6E-8 T 14-10-2018 IPR001623 DnaJ domain C3Y93_02095 245c30ae4f3ac2c0dcad8c43a5c2bf3e 171 Gene3D G3DSA:1.20.1280.20 75 161 2.4E-17 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3Y93_02095 245c30ae4f3ac2c0dcad8c43a5c2bf3e 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 82 152 2.1E-12 T 14-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3Y93_02095 245c30ae4f3ac2c0dcad8c43a5c2bf3e 171 SMART SM00271 1 61 7.4E-8 T 14-10-2018 IPR001623 DnaJ domain C3Y93_02095 245c30ae4f3ac2c0dcad8c43a5c2bf3e 171 SUPERFAMILY SSF46565 1 68 8.11E-14 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C3Y93_02095 245c30ae4f3ac2c0dcad8c43a5c2bf3e 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 160 16.781 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3Y93_02095 245c30ae4f3ac2c0dcad8c43a5c2bf3e 171 SUPERFAMILY SSF47144 74 161 1.44E-18 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3Y93_02095 245c30ae4f3ac2c0dcad8c43a5c2bf3e 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 15 158 1.5E-26 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C3Y93_01560 d19726d180c82a6138c606f0f5eec48d 570 SMART SM00382 12 168 3.3E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_01560 d19726d180c82a6138c606f0f5eec48d 570 Gene3D G3DSA:3.40.50.300 1 172 6.9E-33 T 14-10-2018 C3Y93_01560 d19726d180c82a6138c606f0f5eec48d 570 SUPERFAMILY SSF52540 3 178 9.27E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01560 d19726d180c82a6138c606f0f5eec48d 570 Gene3D G3DSA:3.40.50.300 188 395 6.9E-6 T 14-10-2018 C3Y93_01560 d19726d180c82a6138c606f0f5eec48d 570 Pfam PF05970 PIF1-like helicase 11 182 2.1E-37 T 14-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 C3Y93_01560 d19726d180c82a6138c606f0f5eec48d 570 Pfam PF05970 PIF1-like helicase 195 297 3.7E-7 T 14-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 C3Y93_01560 d19726d180c82a6138c606f0f5eec48d 570 SUPERFAMILY SSF52540 127 410 8.76E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01560 d19726d180c82a6138c606f0f5eec48d 570 Pfam PF14493 Helix-turn-helix domain 466 566 5.4E-17 T 14-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 C3Y93_01320 ee477bb131db3c028ca83ed8c4197190 349 SUPERFAMILY SSF53335 70 339 2.92E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_01320 ee477bb131db3c028ca83ed8c4197190 349 Gene3D G3DSA:3.40.50.150 56 341 8.3E-72 T 14-10-2018 C3Y93_01320 ee477bb131db3c028ca83ed8c4197190 349 Pfam PF02353 Mycolic acid cyclopropane synthetase 67 330 6.2E-41 T 14-10-2018 C3Y93_06945 d1a7aafca49eb2ce6320b9d265b15857 228 SUPERFAMILY SSF46894 131 225 3.68E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3Y93_06945 d1a7aafca49eb2ce6320b9d265b15857 228 SMART SM00862 144 223 1.3E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_06945 d1a7aafca49eb2ce6320b9d265b15857 228 Pfam PF00072 Response regulator receiver domain 4 113 2.1E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_06945 d1a7aafca49eb2ce6320b9d265b15857 228 Gene3D G3DSA:1.10.10.10 129 225 5.8E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_06945 d1a7aafca49eb2ce6320b9d265b15857 228 SUPERFAMILY SSF52172 1 125 3.98E-42 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_06945 d1a7aafca49eb2ce6320b9d265b15857 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 223 5.2E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_06945 d1a7aafca49eb2ce6320b9d265b15857 228 Gene3D G3DSA:3.40.50.2300 1 128 2.3E-38 T 14-10-2018 C3Y93_06945 d1a7aafca49eb2ce6320b9d265b15857 228 SMART SM00448 2 112 9.0E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_01050 dbcd06c7bb57242d01779ae48a6d2302 108 SMART SM00530 13 68 9.5E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_01050 dbcd06c7bb57242d01779ae48a6d2302 108 SUPERFAMILY SSF47413 9 74 1.39E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_01050 dbcd06c7bb57242d01779ae48a6d2302 108 Pfam PF01381 Helix-turn-helix 14 68 8.7E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_01050 dbcd06c7bb57242d01779ae48a6d2302 108 Gene3D G3DSA:1.10.260.40 10 105 5.0E-22 T 14-10-2018 C3Y93_02050 942a93ef6d13437d7bae064923283988 259 Pfam PF13417 Glutathione S-transferase, N-terminal domain 162 258 3.2E-10 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C3Y93_02050 942a93ef6d13437d7bae064923283988 259 Pfam PF13417 Glutathione S-transferase, N-terminal domain 38 114 5.2E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C3Y93_02050 942a93ef6d13437d7bae064923283988 259 SUPERFAMILY SSF52833 36 130 1.14E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_02050 942a93ef6d13437d7bae064923283988 259 SUPERFAMILY SSF52833 160 258 6.2E-9 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_02050 942a93ef6d13437d7bae064923283988 259 Gene3D G3DSA:3.40.30.10 157 259 1.8E-14 T 14-10-2018 C3Y93_02050 942a93ef6d13437d7bae064923283988 259 Gene3D G3DSA:3.40.30.10 31 132 3.6E-17 T 14-10-2018 C3Y93_07540 ecd4ab1bada79217197d53d955475021 127 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 40 110 6.9E-5 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD C3Y93_01795 4b9627ad33df3f3574034fba58debe9b 721 Gene3D G3DSA:1.20.1220.12 579 721 6.0E-70 T 14-10-2018 C3Y93_01795 4b9627ad33df3f3574034fba58debe9b 721 Gene3D G3DSA:2.170.170.11 132 261 3.9E-264 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 C3Y93_01795 4b9627ad33df3f3574034fba58debe9b 721 Hamap MF_00641 Malate synthase G [glcB]. 1 721 376.83 T 14-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 C3Y93_01795 4b9627ad33df3f3574034fba58debe9b 721 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 716 0.0 T 14-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 C3Y93_01795 4b9627ad33df3f3574034fba58debe9b 721 Pfam PF01274 Malate synthase 17 693 9.3E-163 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 C3Y93_01795 4b9627ad33df3f3574034fba58debe9b 721 SUPERFAMILY SSF51645 3 717 1.96E-293 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 C3Y93_01795 4b9627ad33df3f3574034fba58debe9b 721 Gene3D G3DSA:3.20.20.360 10 578 3.9E-264 T 14-10-2018 C3Y93_02765 246d86cd26a3c7306b3f36bbfac0a570 452 SMART SM00267 279 451 5.2E-59 T 14-10-2018 IPR000160 GGDEF domain C3Y93_02765 246d86cd26a3c7306b3f36bbfac0a570 452 Pfam PF00990 Diguanylate cyclase, GGDEF domain 290 447 1.3E-46 T 14-10-2018 IPR000160 GGDEF domain C3Y93_02765 246d86cd26a3c7306b3f36bbfac0a570 452 Gene3D G3DSA:3.30.70.270 276 451 3.0E-50 T 14-10-2018 C3Y93_02765 246d86cd26a3c7306b3f36bbfac0a570 452 SUPERFAMILY SSF55073 295 450 1.49E-42 T 14-10-2018 IPR029787 Nucleotide cyclase C3Y93_02765 246d86cd26a3c7306b3f36bbfac0a570 452 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 289 450 2.0E-49 T 14-10-2018 IPR000160 GGDEF domain C3Y93_02765 246d86cd26a3c7306b3f36bbfac0a570 452 Pfam PF05231 MASE1 11 279 5.2E-8 T 14-10-2018 IPR007895 MASE1 C3Y93_10995 8150dcf9bf37c881ade5f6c14a6e1fd9 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 24.549 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 C3Y93_10995 8150dcf9bf37c881ade5f6c14a6e1fd9 90 SUPERFAMILY SSF111148 1 84 1.44E-32 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 C3Y93_10995 8150dcf9bf37c881ade5f6c14a6e1fd9 90 Gene3D G3DSA:1.10.3880.10 1 90 5.6E-31 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 C3Y93_10995 8150dcf9bf37c881ade5f6c14a6e1fd9 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 84 1.1E-34 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 C3Y93_10995 8150dcf9bf37c881ade5f6c14a6e1fd9 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 73 2.0E-30 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 C3Y93_10995 8150dcf9bf37c881ade5f6c14a6e1fd9 90 PIRSF PIRSF029827 1 90 3.0E-35 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 C3Y93_10450 083ec67035e387089372283fc792ba43 224 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 19 214 4.4E-44 T 14-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 C3Y93_10450 083ec67035e387089372283fc792ba43 224 Pfam PF03070 TENA/THI-4/PQQC family 22 214 5.5E-37 T 14-10-2018 IPR004305 Thiaminase-2/PQQC C3Y93_10450 083ec67035e387089372283fc792ba43 224 Gene3D G3DSA:1.20.910.10 1 222 1.5E-65 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 C3Y93_10450 083ec67035e387089372283fc792ba43 224 SUPERFAMILY SSF48613 1 213 2.37E-64 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 C3Y93_12320 2944cbff04a73e6daaad756d3556672a 352 Gene3D G3DSA:1.10.40.50 285 352 4.4E-22 T 14-10-2018 C3Y93_12320 2944cbff04a73e6daaad756d3556672a 352 SUPERFAMILY SSF52540 128 347 1.26E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_12320 2944cbff04a73e6daaad756d3556672a 352 Pfam PF03193 RsgA GTPase 114 285 2.4E-49 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 C3Y93_12320 2944cbff04a73e6daaad756d3556672a 352 Gene3D G3DSA:3.40.50.300 117 284 9.7E-45 T 14-10-2018 C3Y93_12320 2944cbff04a73e6daaad756d3556672a 352 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 34 349 32.662 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 C3Y93_12320 2944cbff04a73e6daaad756d3556672a 352 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 92 342 7.9E-70 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 C3Y93_12320 2944cbff04a73e6daaad756d3556672a 352 Gene3D G3DSA:2.40.50.140 32 116 7.3E-18 T 14-10-2018 C3Y93_09815 1944fb4544f1e67edb7cbbc71e39663c 233 SUPERFAMILY SSF54423 30 81 4.32E-11 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 C3Y93_09815 1944fb4544f1e67edb7cbbc71e39663c 233 Pfam PF13098 Thioredoxin-like domain 108 227 2.4E-27 T 14-10-2018 IPR012336 Thioredoxin-like fold C3Y93_09815 1944fb4544f1e67edb7cbbc71e39663c 233 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 78 3.4E-14 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal C3Y93_09815 1944fb4544f1e67edb7cbbc71e39663c 233 Gene3D G3DSA:3.40.30.10 99 231 8.9E-34 T 14-10-2018 C3Y93_09815 1944fb4544f1e67edb7cbbc71e39663c 233 ProSitePatterns PS00194 Thioredoxin family active site. 115 133 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3Y93_09815 1944fb4544f1e67edb7cbbc71e39663c 233 SUPERFAMILY SSF52833 89 229 2.08E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_09815 1944fb4544f1e67edb7cbbc71e39663c 233 Gene3D G3DSA:3.10.450.70 18 82 7.8E-8 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 C3Y93_10855 ad4571982ade1fc00f46ce3ac3ecf07f 135 Gene3D G3DSA:3.40.50.10110 1 134 1.1E-32 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily C3Y93_10855 ad4571982ade1fc00f46ce3ac3ecf07f 135 SUPERFAMILY SSF102400 1 134 1.96E-33 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily C3Y93_10855 ad4571982ade1fc00f46ce3ac3ecf07f 135 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 130 2.8E-31 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 C3Y93_03575 ff693d607cb3f319537a82bdda98a052 751 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 625 746 6.0E-6 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_03575 ff693d607cb3f319537a82bdda98a052 751 SUPERFAMILY SSF52540 33 222 2.02E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_03575 ff693d607cb3f319537a82bdda98a052 751 Gene3D G3DSA:1.20.272.10 241 361 1.2E-31 T 14-10-2018 C3Y93_03575 ff693d607cb3f319537a82bdda98a052 751 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 366 7.1E-27 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 C3Y93_03575 ff693d607cb3f319537a82bdda98a052 751 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 355 5.4E-133 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 C3Y93_03575 ff693d607cb3f319537a82bdda98a052 751 Gene3D G3DSA:3.40.50.300 12 176 3.9E-102 T 14-10-2018 C3Y93_03575 ff693d607cb3f319537a82bdda98a052 751 Pfam PF13177 DNA polymerase III, delta subunit 19 177 2.2E-39 T 14-10-2018 C3Y93_03575 ff693d607cb3f319537a82bdda98a052 751 Gene3D G3DSA:1.10.8.60 7 239 3.9E-102 T 14-10-2018 C3Y93_03575 ff693d607cb3f319537a82bdda98a052 751 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 40 58 2.3E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3Y93_03575 ff693d607cb3f319537a82bdda98a052 751 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 123 141 2.3E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3Y93_03575 ff693d607cb3f319537a82bdda98a052 751 SMART SM00382 36 177 6.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_03575 ff693d607cb3f319537a82bdda98a052 751 SUPERFAMILY SSF48019 242 364 5.87E-26 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 SUPERFAMILY SSF52540 4 167 1.04E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 Gene3D G3DSA:3.40.50.300 171 350 1.2E-48 T 14-10-2018 C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 Hamap MF_00195 GTPase Der [der]. 2 435 37.626 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 Gene3D G3DSA:3.30.300.20 352 434 1.6E-19 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 Gene3D G3DSA:3.40.50.300 1 160 4.2E-43 T 14-10-2018 C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 352 432 9.1E-26 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 SUPERFAMILY SSF52540 137 438 7.09E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 PIRSF PIRSF006485 1 440 1.1E-171 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 131 2.5E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 337 2.5E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.4E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 1.4E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 Pfam PF01926 50S ribosome-binding GTPase 179 296 1.3E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 Pfam PF01926 50S ribosome-binding GTPase 5 119 8.5E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_06790 8cb884731ee9d6917f255a174801d772 470 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 432 9.1E-177 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 Gene3D G3DSA:3.40.50.620 4 377 1.6E-148 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 4 533 9.0E-171 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 7.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 248 259 7.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 7.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 38 52 7.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 86 97 7.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 7.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 555 684 2.2E-41 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 Gene3D G3DSA:2.20.28.20 138 172 1.6E-148 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 Pfam PF08264 Anticodon-binding domain of tRNA 425 501 6.1E-7 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 Pfam PF09334 tRNA synthetases class I (M) 4 394 1.1E-150 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 544 39.113 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 SUPERFAMILY SSF47323 384 597 1.59E-41 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 Pfam PF01588 Putative tRNA binding domain 590 683 2.9E-24 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 SUPERFAMILY SSF50249 583 684 8.08E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 SUPERFAMILY SSF57770 138 172 1.83E-12 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 Gene3D G3DSA:1.10.730.10 378 534 1.4E-34 T 14-10-2018 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 SUPERFAMILY SSF52374 3 385 1.95E-97 T 14-10-2018 C3Y93_05775 1cb53ba3e3397a16e31a145ebf348dd7 685 Gene3D G3DSA:2.40.50.140 577 685 6.0E-33 T 14-10-2018 C3Y93_12860 469dfdd146154a5f9e4f8677094c3fe1 328 SUPERFAMILY SSF52151 15 318 4.45E-71 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase C3Y93_12860 469dfdd146154a5f9e4f8677094c3fe1 328 Pfam PF00698 Acyl transferase domain 17 287 8.9E-37 T 14-10-2018 IPR014043 Acyl transferase C3Y93_12860 469dfdd146154a5f9e4f8677094c3fe1 328 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 18 313 2.2E-44 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain C3Y93_12860 469dfdd146154a5f9e4f8677094c3fe1 328 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 14 298 1.5E-97 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 C3Y93_12860 469dfdd146154a5f9e4f8677094c3fe1 328 Gene3D G3DSA:3.40.366.10 17 296 7.0E-94 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 C3Y93_12860 469dfdd146154a5f9e4f8677094c3fe1 328 SUPERFAMILY SSF55048 138 203 2.09E-14 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding C3Y93_12860 469dfdd146154a5f9e4f8677094c3fe1 328 PIRSF PIRSF000446 12 321 4.5E-104 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 C3Y93_12860 469dfdd146154a5f9e4f8677094c3fe1 328 Gene3D G3DSA:3.30.70.250 134 207 7.0E-94 T 14-10-2018 C3Y93_07985 b08cfcaf097f9071957b47894d228a59 82 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07985 b08cfcaf097f9071957b47894d228a59 82 Gene3D G3DSA:2.30.170.50 1 82 7.1E-23 T 14-10-2018 C3Y93_07985 b08cfcaf097f9071957b47894d228a59 82 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.2E-15 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07985 b08cfcaf097f9071957b47894d228a59 82 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.2E-15 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07985 b08cfcaf097f9071957b47894d228a59 82 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.2E-15 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07985 b08cfcaf097f9071957b47894d228a59 82 Pfam PF01197 Ribosomal protein L31 1 78 3.3E-25 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07985 b08cfcaf097f9071957b47894d228a59 82 SUPERFAMILY SSF143800 1 80 5.1E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07985 b08cfcaf097f9071957b47894d228a59 82 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 25.905 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07985 b08cfcaf097f9071957b47894d228a59 82 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.3E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_06345 c3f12880bd65502bd0e1df1a600d22b5 150 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 7 148 1.9E-41 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 C3Y93_06345 c3f12880bd65502bd0e1df1a600d22b5 150 PIRSF PIRSF004638 1 150 2.5E-50 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 C3Y93_06345 c3f12880bd65502bd0e1df1a600d22b5 150 Pfam PF03653 Uncharacterised protein family (UPF0093) 6 148 1.0E-48 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 C3Y93_13295 76627b1d7d773676e3627f026e2f0edc 404 SUPERFAMILY SSF52777 176 403 1.33E-87 T 14-10-2018 C3Y93_13295 76627b1d7d773676e3627f026e2f0edc 404 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 174 401 7.5E-81 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 C3Y93_13295 76627b1d7d773676e3627f026e2f0edc 404 Gene3D G3DSA:3.30.559.10 172 404 5.2E-94 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 C3Y93_13295 76627b1d7d773676e3627f026e2f0edc 404 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 C3Y93_13295 76627b1d7d773676e3627f026e2f0edc 404 Pfam PF00364 Biotin-requiring enzyme 4 75 5.0E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C3Y93_13295 76627b1d7d773676e3627f026e2f0edc 404 SUPERFAMILY SSF47005 118 157 3.92E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 C3Y93_13295 76627b1d7d773676e3627f026e2f0edc 404 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 403 1.9E-179 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 C3Y93_13295 76627b1d7d773676e3627f026e2f0edc 404 SUPERFAMILY SSF51230 1 90 9.55E-24 T 14-10-2018 IPR011053 Single hybrid motif C3Y93_13295 76627b1d7d773676e3627f026e2f0edc 404 Gene3D G3DSA:4.10.320.10 109 158 5.1E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 C3Y93_13295 76627b1d7d773676e3627f026e2f0edc 404 Gene3D G3DSA:2.40.50.100 2 79 1.6E-20 T 14-10-2018 C3Y93_13295 76627b1d7d773676e3627f026e2f0edc 404 Pfam PF02817 e3 binding domain 122 152 5.9E-11 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 C3Y93_07110 2dbb5ee34fccbf8d9f7e6fd677f1cca1 575 SUPERFAMILY SSF52518 373 569 4.76E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3Y93_07110 2dbb5ee34fccbf8d9f7e6fd677f1cca1 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.5E-45 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 C3Y93_07110 2dbb5ee34fccbf8d9f7e6fd677f1cca1 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 9.5E-47 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 C3Y93_07110 2dbb5ee34fccbf8d9f7e6fd677f1cca1 575 Gene3D G3DSA:3.40.50.970 1 182 1.3E-72 T 14-10-2018 C3Y93_07110 2dbb5ee34fccbf8d9f7e6fd677f1cca1 575 SUPERFAMILY SSF52518 4 179 2.69E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3Y93_07110 2dbb5ee34fccbf8d9f7e6fd677f1cca1 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 166 5.1E-59 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 C3Y93_07110 2dbb5ee34fccbf8d9f7e6fd677f1cca1 575 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 568 8.3E-253 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 C3Y93_07110 2dbb5ee34fccbf8d9f7e6fd677f1cca1 575 Gene3D G3DSA:3.40.50.970 366 574 3.1E-64 T 14-10-2018 C3Y93_07110 2dbb5ee34fccbf8d9f7e6fd677f1cca1 575 Gene3D G3DSA:3.40.50.1220 191 362 1.0E-61 T 14-10-2018 C3Y93_07110 2dbb5ee34fccbf8d9f7e6fd677f1cca1 575 SUPERFAMILY SSF52467 190 362 4.62E-65 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C3Y93_12045 adcc77448b8df9795fd6230dc20e4890 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 3.5E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_12045 adcc77448b8df9795fd6230dc20e4890 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.1E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_12045 adcc77448b8df9795fd6230dc20e4890 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.1E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_12045 adcc77448b8df9795fd6230dc20e4890 233 Pfam PF13972 Bacterial transcriptional repressor 62 208 6.7E-37 T 14-10-2018 IPR025722 Bacterial transcriptional repressor TetR C3Y93_12045 adcc77448b8df9795fd6230dc20e4890 233 Gene3D G3DSA:1.10.357.10 4 224 3.9E-63 T 14-10-2018 C3Y93_12045 adcc77448b8df9795fd6230dc20e4890 233 SUPERFAMILY SSF46689 5 78 4.47E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_05330 cec55413c1d7437c2eaa98d60d4dff35 130 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 4.2E-48 T 14-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 C3Y93_05330 cec55413c1d7437c2eaa98d60d4dff35 130 SMART SM00422 1 70 1.2E-30 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_05330 cec55413c1d7437c2eaa98d60d4dff35 130 Pfam PF00376 MerR family regulatory protein 2 39 1.8E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_05330 cec55413c1d7437c2eaa98d60d4dff35 130 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_05330 cec55413c1d7437c2eaa98d60d4dff35 130 SUPERFAMILY SSF46955 1 126 3.26E-37 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3Y93_05330 cec55413c1d7437c2eaa98d60d4dff35 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.4E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_05330 cec55413c1d7437c2eaa98d60d4dff35 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.4E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_05330 cec55413c1d7437c2eaa98d60d4dff35 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.4E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_05330 cec55413c1d7437c2eaa98d60d4dff35 130 Pfam PF09278 MerR, DNA binding 45 106 4.2E-16 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding C3Y93_05330 cec55413c1d7437c2eaa98d60d4dff35 130 Gene3D G3DSA:1.10.1660.10 1 125 7.0E-35 T 14-10-2018 C3Y93_01525 ab4f5d896ec1d4257121ea30b76a515b 194 SUPERFAMILY SSF101874 24 188 7.59E-54 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily C3Y93_01525 ab4f5d896ec1d4257121ea30b76a515b 194 SMART SM00867 25 189 3.0E-69 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like C3Y93_01525 ab4f5d896ec1d4257121ea30b76a515b 194 Gene3D G3DSA:2.40.128.110 24 190 6.7E-54 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily C3Y93_01525 ab4f5d896ec1d4257121ea30b76a515b 194 Pfam PF04264 YceI-like domain 26 188 6.9E-45 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like C3Y93_03420 ae4135e828ca4d07a9c6db825f4daa7b 674 Gene3D G3DSA:3.20.20.70 3 369 1.1E-122 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_03420 ae4135e828ca4d07a9c6db825f4daa7b 674 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 4.0E-87 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 C3Y93_03420 ae4135e828ca4d07a9c6db825f4daa7b 674 Gene3D G3DSA:3.50.50.60 473 627 1.9E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_03420 ae4135e828ca4d07a9c6db825f4daa7b 674 SUPERFAMILY SSF51395 3 363 5.76E-109 T 14-10-2018 C3Y93_03420 ae4135e828ca4d07a9c6db825f4daa7b 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 2.5E-17 T 14-10-2018 C3Y93_03420 ae4135e828ca4d07a9c6db825f4daa7b 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 461 479 2.5E-17 T 14-10-2018 C3Y93_03420 ae4135e828ca4d07a9c6db825f4daa7b 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 620 636 2.5E-17 T 14-10-2018 C3Y93_03420 ae4135e828ca4d07a9c6db825f4daa7b 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 501 519 2.5E-17 T 14-10-2018 C3Y93_03420 ae4135e828ca4d07a9c6db825f4daa7b 674 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 642 1.5E-24 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3Y93_03420 ae4135e828ca4d07a9c6db825f4daa7b 674 SUPERFAMILY SSF51971 334 522 1.04E-40 T 14-10-2018 C3Y93_03420 ae4135e828ca4d07a9c6db825f4daa7b 674 Gene3D G3DSA:3.40.50.720 376 667 1.9E-116 T 14-10-2018 C3Y93_03420 ae4135e828ca4d07a9c6db825f4daa7b 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 377 399 5.6E-7 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_03420 ae4135e828ca4d07a9c6db825f4daa7b 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 497 521 5.6E-7 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_03420 ae4135e828ca4d07a9c6db825f4daa7b 674 SUPERFAMILY SSF51905 464 652 2.19E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_11870 5d007885e0095c2d25adc36144603c36 160 SUPERFAMILY SSF55811 7 155 5.42E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3Y93_11870 5d007885e0095c2d25adc36144603c36 160 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.5E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C3Y93_11870 5d007885e0095c2d25adc36144603c36 160 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.5E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C3Y93_11870 5d007885e0095c2d25adc36144603c36 160 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C3Y93_11870 5d007885e0095c2d25adc36144603c36 160 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.097 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH C3Y93_11870 5d007885e0095c2d25adc36144603c36 160 Pfam PF00293 NUDIX domain 7 145 2.4E-26 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3Y93_11870 5d007885e0095c2d25adc36144603c36 160 Gene3D G3DSA:3.90.79.10 1 155 7.9E-45 T 14-10-2018 C3Y93_02345 a3d2340c08dfd15fcada5d9487149da7 140 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 137 1.1E-38 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 C3Y93_02345 a3d2340c08dfd15fcada5d9487149da7 140 SUPERFAMILY SSF51230 67 137 1.83E-21 T 14-10-2018 IPR011053 Single hybrid motif C3Y93_02345 a3d2340c08dfd15fcada5d9487149da7 140 Pfam PF00364 Biotin-requiring enzyme 67 137 1.7E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C3Y93_02345 a3d2340c08dfd15fcada5d9487149da7 140 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 99 1.3E-14 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 C3Y93_02345 a3d2340c08dfd15fcada5d9487149da7 140 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 68 81 1.3E-14 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 C3Y93_02345 a3d2340c08dfd15fcada5d9487149da7 140 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 113 1.3E-14 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 C3Y93_02345 a3d2340c08dfd15fcada5d9487149da7 140 Gene3D G3DSA:2.40.50.100 63 137 1.7E-27 T 14-10-2018 C3Y93_07465 18c4253b5d0082e7e0d17a33a7dd61a5 744 SUPERFAMILY SSF56935 31 744 2.85E-118 T 14-10-2018 C3Y93_07465 18c4253b5d0082e7e0d17a33a7dd61a5 744 Gene3D G3DSA:2.40.170.20 179 744 1.8E-113 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C3Y93_07465 18c4253b5d0082e7e0d17a33a7dd61a5 744 Gene3D G3DSA:2.170.130.10 47 177 2.3E-39 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3Y93_07465 18c4253b5d0082e7e0d17a33a7dd61a5 744 Pfam PF00593 TonB dependent receptor 274 743 5.5E-46 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3Y93_07465 18c4253b5d0082e7e0d17a33a7dd61a5 744 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 67 744 1.7E-78 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 C3Y93_07465 18c4253b5d0082e7e0d17a33a7dd61a5 744 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 164 1.0E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 Gene3D G3DSA:1.10.10.60 406 475 1.2E-14 T 14-10-2018 C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 SUPERFAMILY SSF52540 141 383 2.66E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 Gene3D G3DSA:3.40.50.2300 7 124 7.8E-31 T 14-10-2018 C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 SMART SM00448 6 117 2.1E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 Pfam PF02954 Bacterial regulatory protein, Fis family 430 470 5.3E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 453 5.5E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 453 473 5.5E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 Pfam PF00158 Sigma-54 interaction domain 141 307 2.2E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 SMART SM00382 161 304 2.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 Pfam PF00072 Response regulator receiver domain 8 117 7.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 Gene3D G3DSA:1.10.8.60 314 385 2.5E-22 T 14-10-2018 C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 Gene3D G3DSA:3.40.50.300 126 312 1.3E-61 T 14-10-2018 C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 SUPERFAMILY SSF46689 355 473 8.51E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_10885 5317ae13a2afe3649b7cdfbb0eaee17e 477 SUPERFAMILY SSF52172 8 186 4.27E-40 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_05425 35412507812327b1ce539acad07487ed 808 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 739 757 8.5E-51 T 14-10-2018 C3Y93_05425 35412507812327b1ce539acad07487ed 808 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 368 387 8.5E-51 T 14-10-2018 C3Y93_05425 35412507812327b1ce539acad07487ed 808 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 686 705 8.5E-51 T 14-10-2018 C3Y93_05425 35412507812327b1ce539acad07487ed 808 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 716 735 8.5E-51 T 14-10-2018 C3Y93_05425 35412507812327b1ce539acad07487ed 808 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 608 624 8.5E-51 T 14-10-2018 C3Y93_05425 35412507812327b1ce539acad07487ed 808 Gene3D G3DSA:3.30.230.10 598 785 9.6E-76 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3Y93_05425 35412507812327b1ce539acad07487ed 808 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 18 211 5.1E-28 T 14-10-2018 IPR003111 Lon, substrate-binding domain C3Y93_05425 35412507812327b1ce539acad07487ed 808 Gene3D G3DSA:3.40.50.300 325 502 5.5E-63 T 14-10-2018 C3Y93_05425 35412507812327b1ce539acad07487ed 808 PIRSF PIRSF001174 6 788 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 C3Y93_05425 35412507812327b1ce539acad07487ed 808 Gene3D G3DSA:2.30.130.40 12 126 3.9E-28 T 14-10-2018 C3Y93_05425 35412507812327b1ce539acad07487ed 808 Hamap MF_01973 Lon protease [lon]. 19 785 66.778 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 C3Y93_05425 35412507812327b1ce539acad07487ed 808 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 583 785 1.2E-86 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 C3Y93_05425 35412507812327b1ce539acad07487ed 808 SMART SM00382 360 504 2.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_05425 35412507812327b1ce539acad07487ed 808 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 364 500 5.1E-20 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3Y93_05425 35412507812327b1ce539acad07487ed 808 SUPERFAMILY SSF52540 326 598 1.49E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_05425 35412507812327b1ce539acad07487ed 808 SMART SM00464 18 213 1.1E-60 T 14-10-2018 IPR003111 Lon, substrate-binding domain C3Y93_05425 35412507812327b1ce539acad07487ed 808 Gene3D G3DSA:1.10.8.60 503 597 1.6E-31 T 14-10-2018 C3Y93_05425 35412507812327b1ce539acad07487ed 808 SUPERFAMILY SSF54211 608 783 3.6E-55 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_05425 35412507812327b1ce539acad07487ed 808 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 689 697 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 C3Y93_05425 35412507812327b1ce539acad07487ed 808 Gene3D G3DSA:1.20.58.1480 131 255 2.6E-23 T 14-10-2018 C3Y93_05425 35412507812327b1ce539acad07487ed 808 SUPERFAMILY SSF88697 18 211 3.73E-28 T 14-10-2018 IPR015947 PUA-like superfamily C3Y93_05425 35412507812327b1ce539acad07487ed 808 TIGRFAM TIGR00763 lon: endopeptidase La 20 783 3.3E-282 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 C3Y93_12025 48481c6b900bb7a4707ed89f36efb154 571 SUPERFAMILY SSF51735 428 559 3.94E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_12025 48481c6b900bb7a4707ed89f36efb154 571 Gene3D G3DSA:3.40.50.720 423 566 3.9E-23 T 14-10-2018 C3Y93_12025 48481c6b900bb7a4707ed89f36efb154 571 Pfam PF00999 Sodium/hydrogen exchanger family 13 388 4.1E-72 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 C3Y93_12025 48481c6b900bb7a4707ed89f36efb154 571 Pfam PF02254 TrkA-N domain 430 540 2.8E-16 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 C3Y93_12025 48481c6b900bb7a4707ed89f36efb154 571 Gene3D G3DSA:1.20.1530.20 4 399 3.0E-75 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily C3Y93_07690 d1f065707964fd408f1e733d498702db 450 PIRSF PIRSF004557 10 445 4.8E-122 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3Y93_07690 d1f065707964fd408f1e733d498702db 450 ProSitePatterns PS00755 Protein secY signature 1. 81 100 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3Y93_07690 d1f065707964fd408f1e733d498702db 450 Hamap MF_01465 Protein translocase subunit SecY [secY]. 15 439 28.516 T 14-10-2018 IPR026593 Protein translocase subunit SecY C3Y93_07690 d1f065707964fd408f1e733d498702db 450 Pfam PF00344 SecY translocase 81 423 6.0E-112 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3Y93_07690 d1f065707964fd408f1e733d498702db 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 28 46 4.0E-92 T 14-10-2018 C3Y93_07690 d1f065707964fd408f1e733d498702db 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 273 292 4.0E-92 T 14-10-2018 C3Y93_07690 d1f065707964fd408f1e733d498702db 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 376 394 4.0E-92 T 14-10-2018 C3Y93_07690 d1f065707964fd408f1e733d498702db 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 181 204 4.0E-92 T 14-10-2018 C3Y93_07690 d1f065707964fd408f1e733d498702db 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 121 144 4.0E-92 T 14-10-2018 C3Y93_07690 d1f065707964fd408f1e733d498702db 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 80 100 4.0E-92 T 14-10-2018 C3Y93_07690 d1f065707964fd408f1e733d498702db 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 155 180 4.0E-92 T 14-10-2018 C3Y93_07690 d1f065707964fd408f1e733d498702db 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 321 343 4.0E-92 T 14-10-2018 C3Y93_07690 d1f065707964fd408f1e733d498702db 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 408 426 4.0E-92 T 14-10-2018 C3Y93_07690 d1f065707964fd408f1e733d498702db 450 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 26 435 6.2E-125 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3Y93_07690 d1f065707964fd408f1e733d498702db 450 SUPERFAMILY SSF103491 9 430 9.68E-127 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3Y93_07690 d1f065707964fd408f1e733d498702db 450 Gene3D G3DSA:1.10.3370.10 12 435 2.7E-157 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3Y93_13565 a00c751a27eaa1581a34b866090c8ee1 212 Pfam PF01521 Iron-sulphur cluster biosynthesis 17 112 4.8E-8 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 C3Y93_13565 a00c751a27eaa1581a34b866090c8ee1 212 Gene3D G3DSA:2.60.300.12 16 113 1.7E-9 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C3Y93_13565 a00c751a27eaa1581a34b866090c8ee1 212 SUPERFAMILY SSF117916 111 204 2.83E-21 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily C3Y93_13565 a00c751a27eaa1581a34b866090c8ee1 212 Pfam PF01106 NifU-like domain 127 198 1.3E-19 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 C3Y93_13565 a00c751a27eaa1581a34b866090c8ee1 212 Gene3D G3DSA:3.30.300.130 121 210 1.5E-19 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily C3Y93_13565 a00c751a27eaa1581a34b866090c8ee1 212 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 18 211 4.5E-87 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 C3Y93_13565 a00c751a27eaa1581a34b866090c8ee1 212 SUPERFAMILY SSF89360 14 110 9.61E-21 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C3Y93_13565 a00c751a27eaa1581a34b866090c8ee1 212 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 16 211 40.517 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 C3Y93_13565 a00c751a27eaa1581a34b866090c8ee1 212 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 134 198 1.0E-26 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 C3Y93_06600 07dfd2c8d2556f44851753f83d0ed2ed 307 SUPERFAMILY SSF82689 183 275 1.05E-20 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 C3Y93_06600 07dfd2c8d2556f44851753f83d0ed2ed 307 Pfam PF00924 Mechanosensitive ion channel 70 270 3.7E-41 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 C3Y93_06600 07dfd2c8d2556f44851753f83d0ed2ed 307 Gene3D G3DSA:3.30.70.100 182 275 1.0E-19 T 14-10-2018 C3Y93_06600 07dfd2c8d2556f44851753f83d0ed2ed 307 SUPERFAMILY SSF50182 112 181 4.36E-12 T 14-10-2018 IPR010920 LSM domain superfamily C3Y93_06600 07dfd2c8d2556f44851753f83d0ed2ed 307 Gene3D G3DSA:2.30.30.60 127 180 3.3E-8 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily C3Y93_06600 07dfd2c8d2556f44851753f83d0ed2ed 307 SUPERFAMILY SSF82861 26 109 3.27E-8 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 C3Y93_07020 6603ef3640c1abad3d3a894325e5bb33 310 Pfam PF13737 Transposase DDE domain 22 130 1.3E-43 T 14-10-2018 IPR025668 Transposase DDE domain C3Y93_05085 6603ef3640c1abad3d3a894325e5bb33 310 Pfam PF13737 Transposase DDE domain 22 130 1.3E-43 T 14-10-2018 IPR025668 Transposase DDE domain C3Y93_08695 6603ef3640c1abad3d3a894325e5bb33 310 Pfam PF13737 Transposase DDE domain 22 130 1.3E-43 T 14-10-2018 IPR025668 Transposase DDE domain C3Y93_07035 6603ef3640c1abad3d3a894325e5bb33 310 Pfam PF13737 Transposase DDE domain 22 130 1.3E-43 T 14-10-2018 IPR025668 Transposase DDE domain C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 SUPERFAMILY SSF55021 8 90 1.02E-13 T 14-10-2018 C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 Pfam PF01842 ACT domain 10 68 9.2E-8 T 14-10-2018 IPR002912 ACT domain C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 SUPERFAMILY SSF53328 94 288 3.01E-56 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 Gene3D G3DSA:3.30.70.260 7 90 3.2E-22 T 14-10-2018 C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 287 43.734 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 PIRSF PIRSF036480 6 288 1.6E-109 T 14-10-2018 C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 Gene3D G3DSA:3.40.50.170 94 288 4.1E-67 T 14-10-2018 C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 Pfam PF00551 Formyl transferase 94 269 1.5E-35 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 287 2.4E-116 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 4.5E-58 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 117 144 4.5E-58 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 95 117 4.5E-58 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 4.5E-58 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 4.5E-58 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3Y93_12050 8e9f6aa3b6b4db69a60f8be1af9618de 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 44 56 4.5E-58 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C3Y93_08985 f303c8a979444cb2c7f32a1bd18626c1 162 Pfam PF13508 Acetyltransferase (GNAT) domain 40 142 3.2E-10 T 14-10-2018 IPR000182 GNAT domain C3Y93_08985 f303c8a979444cb2c7f32a1bd18626c1 162 SUPERFAMILY SSF55729 14 143 3.01E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3Y93_08985 f303c8a979444cb2c7f32a1bd18626c1 162 Gene3D G3DSA:3.40.630.30 1 157 1.4E-46 T 14-10-2018 C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 SUPERFAMILY SSF52540 71 289 2.18E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 Pfam PF06745 KaiC 76 150 1.2E-10 T 14-10-2018 IPR014774 KaiC-like domain C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 Gene3D G3DSA:3.40.50.300 68 286 1.2E-39 T 14-10-2018 C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 SMART SM00382 92 247 1.5E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 SUPERFAMILY SSF54211 257 457 3.11E-39 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 PRINTS PR01874 DNA repair protein radA signature 176 200 4.3E-92 T 14-10-2018 C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 PRINTS PR01874 DNA repair protein radA signature 10 34 4.3E-92 T 14-10-2018 C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 PRINTS PR01874 DNA repair protein radA signature 84 112 4.3E-92 T 14-10-2018 C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 PRINTS PR01874 DNA repair protein radA signature 126 143 4.3E-92 T 14-10-2018 C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 PRINTS PR01874 DNA repair protein radA signature 250 276 4.3E-92 T 14-10-2018 C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 PRINTS PR01874 DNA repair protein radA signature 323 346 4.3E-92 T 14-10-2018 C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 PRINTS PR01874 DNA repair protein radA signature 215 243 4.3E-92 T 14-10-2018 C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 431 4.5E-7 T 14-10-2018 C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 Gene3D G3DSA:3.30.230.10 313 459 6.4E-18 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 Hamap MF_01498 DNA repair protein RadA [radA]. 21 456 42.855 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 C3Y93_13885 2d5b650323a6f0193661bcc1674043b8 463 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 1.6E-192 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 C3Y93_05940 8517f08ca3d35d80b0c97763ed761fed 396 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 5 394 1.1E-229 T 14-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 C3Y93_05940 8517f08ca3d35d80b0c97763ed761fed 396 Gene3D G3DSA:3.10.310.10 11 388 1.7E-152 T 14-10-2018 C3Y93_05940 8517f08ca3d35d80b0c97763ed761fed 396 Pfam PF04303 PrpF protein 6 391 9.7E-177 T 14-10-2018 IPR007400 PrpF protein C3Y93_05940 8517f08ca3d35d80b0c97763ed761fed 396 SUPERFAMILY SSF54506 2 182 1.26E-71 T 14-10-2018 C3Y93_05940 8517f08ca3d35d80b0c97763ed761fed 396 SUPERFAMILY SSF54506 189 393 1.13E-76 T 14-10-2018 C3Y93_05940 8517f08ca3d35d80b0c97763ed761fed 396 Gene3D G3DSA:3.10.310.10 181 374 1.7E-152 T 14-10-2018 C3Y93_01355 7bb93ab7d3a657c8a209fd61e30d3ac5 262 Pfam PF00290 Tryptophan synthase alpha chain 9 252 3.5E-71 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_01355 7bb93ab7d3a657c8a209fd61e30d3ac5 262 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 9 255 1.3E-62 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_01355 7bb93ab7d3a657c8a209fd61e30d3ac5 262 SUPERFAMILY SSF51366 1 240 2.26E-68 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3Y93_01355 7bb93ab7d3a657c8a209fd61e30d3ac5 262 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 260 29.409 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_01355 7bb93ab7d3a657c8a209fd61e30d3ac5 262 Gene3D G3DSA:3.20.20.70 1 262 4.3E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_01355 7bb93ab7d3a657c8a209fd61e30d3ac5 262 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_00045 4c051596876803ad02bd6fbc639cbe0d 324 PIRSF PIRSF500210 1 324 2.6E-121 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3Y93_00045 4c051596876803ad02bd6fbc639cbe0d 324 Gene3D G3DSA:3.40.190.80 188 324 1.1E-50 T 14-10-2018 C3Y93_00045 4c051596876803ad02bd6fbc639cbe0d 324 Gene3D G3DSA:3.30.540.10 1 186 1.2E-65 T 14-10-2018 C3Y93_00045 4c051596876803ad02bd6fbc639cbe0d 324 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 324 44.12 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3Y93_00045 4c051596876803ad02bd6fbc639cbe0d 324 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 11 184 1.6E-58 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3Y93_00045 4c051596876803ad02bd6fbc639cbe0d 324 PIRSF PIRSF000904 1 324 5.2E-119 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3Y93_00045 4c051596876803ad02bd6fbc639cbe0d 324 SUPERFAMILY SSF56655 4 323 2.69E-108 T 14-10-2018 C3Y93_00045 4c051596876803ad02bd6fbc639cbe0d 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 140 163 1.0E-62 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3Y93_00045 4c051596876803ad02bd6fbc639cbe0d 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 197 224 1.0E-62 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3Y93_00045 4c051596876803ad02bd6fbc639cbe0d 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 299 324 1.0E-62 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3Y93_00045 4c051596876803ad02bd6fbc639cbe0d 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 26 53 1.0E-62 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3Y93_00045 4c051596876803ad02bd6fbc639cbe0d 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 171 194 1.0E-62 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3Y93_00045 4c051596876803ad02bd6fbc639cbe0d 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 63 89 1.0E-62 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C3Y93_11815 49246bf7cf08d0fdd41b8796b9b84077 321 SUPERFAMILY SSF53213 4 317 1.2E-62 T 14-10-2018 C3Y93_11815 49246bf7cf08d0fdd41b8796b9b84077 321 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 5 313 2.4E-49 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 C3Y93_06145 9070528d4bc95dfef068fc4cd6851084 337 Gene3D G3DSA:3.20.20.70 2 336 2.0E-142 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_06145 9070528d4bc95dfef068fc4cd6851084 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 2.8E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3Y93_06145 9070528d4bc95dfef068fc4cd6851084 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 2.8E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3Y93_06145 9070528d4bc95dfef068fc4cd6851084 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 2.8E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3Y93_06145 9070528d4bc95dfef068fc4cd6851084 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 2.8E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3Y93_06145 9070528d4bc95dfef068fc4cd6851084 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 2.8E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3Y93_06145 9070528d4bc95dfef068fc4cd6851084 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 2.8E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3Y93_06145 9070528d4bc95dfef068fc4cd6851084 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 330 7.4E-134 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3Y93_06145 9070528d4bc95dfef068fc4cd6851084 337 PIRSF PIRSF001415 2 336 4.5E-141 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3Y93_06145 9070528d4bc95dfef068fc4cd6851084 337 SUPERFAMILY SSF51569 6 334 2.32E-135 T 14-10-2018 C3Y93_06145 9070528d4bc95dfef068fc4cd6851084 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3Y93_06145 9070528d4bc95dfef068fc4cd6851084 337 SMART SM01004 10 333 6.7E-227 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C3Y93_01020 90fbb04d5e73c36571a0d6582a11209c 249 SUPERFAMILY SSF75625 3 246 8.24E-92 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_01020 90fbb04d5e73c36571a0d6582a11209c 249 Pfam PF01709 Transcriptional regulator 5 237 3.7E-92 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_01020 90fbb04d5e73c36571a0d6582a11209c 249 Gene3D G3DSA:3.30.70.980 85 236 4.8E-53 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_01020 90fbb04d5e73c36571a0d6582a11209c 249 Gene3D G3DSA:1.10.10.200 1 81 1.9E-33 T 14-10-2018 IPR017856 Integrase-like, N-terminal C3Y93_01020 90fbb04d5e73c36571a0d6582a11209c 249 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 34.497 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_01020 90fbb04d5e73c36571a0d6582a11209c 249 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 4.1E-95 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_01020 90fbb04d5e73c36571a0d6582a11209c 249 Gene3D G3DSA:3.30.70.980 130 204 4.8E-53 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_04135 1d4948c40c800c3efe9b57858fc9de7d 208 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 162 190 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 C3Y93_04135 1d4948c40c800c3efe9b57858fc9de7d 208 SUPERFAMILY SSF51161 48 207 2.24E-37 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3Y93_04135 1d4948c40c800c3efe9b57858fc9de7d 208 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 78 110 2.9E-4 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_04135 1d4948c40c800c3efe9b57858fc9de7d 208 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 154 188 4.6E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_04135 1d4948c40c800c3efe9b57858fc9de7d 208 Gene3D G3DSA:2.160.10.10 43 207 1.1E-43 T 14-10-2018 C3Y93_08880 da81481e9e9010a583019d7e5b20aefd 267 Pfam PF01636 Phosphotransferase enzyme family 17 258 1.2E-29 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase C3Y93_08880 da81481e9e9010a583019d7e5b20aefd 267 Gene3D G3DSA:3.30.200.20 8 83 2.0E-16 T 14-10-2018 C3Y93_08880 da81481e9e9010a583019d7e5b20aefd 267 Gene3D G3DSA:3.90.1200.10 84 264 4.5E-53 T 14-10-2018 C3Y93_08880 da81481e9e9010a583019d7e5b20aefd 267 SUPERFAMILY SSF56112 6 263 1.9E-42 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3Y93_08880 da81481e9e9010a583019d7e5b20aefd 267 PIRSF PIRSF000706 2 265 7.0E-81 T 14-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 C3Y93_00770 0769e2c8d4b4cf941601c155e3dbf7fb 260 Pfam PF05690 Thiazole biosynthesis protein ThiG 6 253 1.7E-108 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 C3Y93_00770 0769e2c8d4b4cf941601c155e3dbf7fb 260 Gene3D G3DSA:3.20.20.70 1 258 7.9E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_00770 0769e2c8d4b4cf941601c155e3dbf7fb 260 SUPERFAMILY SSF110399 3 245 1.15E-88 T 14-10-2018 C3Y93_00770 0769e2c8d4b4cf941601c155e3dbf7fb 260 Hamap MF_00443 Thiazole synthase [thiG]. 4 259 41.764 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 C3Y93_12175 e83d61b5f2c3dd252acfe651080115d8 285 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 270 39.209 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 C3Y93_12175 e83d61b5f2c3dd252acfe651080115d8 285 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 283 2.5E-68 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 C3Y93_12175 e83d61b5f2c3dd252acfe651080115d8 285 Gene3D G3DSA:3.40.50.150 1 285 2.8E-97 T 14-10-2018 C3Y93_12175 e83d61b5f2c3dd252acfe651080115d8 285 SUPERFAMILY SSF53335 8 276 1.52E-81 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_01395 272df79f700fb8cb13c5fcff8f4f8035 552 Pfam PF00732 GMC oxidoreductase 6 304 3.8E-97 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 C3Y93_01395 272df79f700fb8cb13c5fcff8f4f8035 552 Gene3D G3DSA:1.10.1220.110 100 154 4.4E-175 T 14-10-2018 C3Y93_01395 272df79f700fb8cb13c5fcff8f4f8035 552 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 263 277 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 C3Y93_01395 272df79f700fb8cb13c5fcff8f4f8035 552 Pfam PF05199 GMC oxidoreductase 397 531 5.8E-41 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 C3Y93_01395 272df79f700fb8cb13c5fcff8f4f8035 552 Gene3D G3DSA:3.30.410.40 155 478 4.4E-175 T 14-10-2018 C3Y93_01395 272df79f700fb8cb13c5fcff8f4f8035 552 Gene3D G3DSA:3.50.50.60 6 535 4.4E-175 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_01395 272df79f700fb8cb13c5fcff8f4f8035 552 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 4 552 59.437 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 C3Y93_01395 272df79f700fb8cb13c5fcff8f4f8035 552 PIRSF PIRSF000137 1 545 1.8E-138 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 C3Y93_01395 272df79f700fb8cb13c5fcff8f4f8035 552 SUPERFAMILY SSF51905 2 538 9.07E-86 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_01395 272df79f700fb8cb13c5fcff8f4f8035 552 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 85 108 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 C3Y93_01395 272df79f700fb8cb13c5fcff8f4f8035 552 TIGRFAM TIGR01810 betA: choline dehydrogenase 7 540 8.3E-283 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 C3Y93_01395 272df79f700fb8cb13c5fcff8f4f8035 552 SUPERFAMILY SSF54373 299 481 9.42E-64 T 14-10-2018 C3Y93_01395 272df79f700fb8cb13c5fcff8f4f8035 552 Gene3D G3DSA:4.10.450.10 39 202 4.4E-175 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 SUPERFAMILY SSF55874 279 445 2.1E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 SMART SM00091 117 182 0.0022 T 14-10-2018 IPR000014 PAS domain C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 289 2.2E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 Pfam PF13188 PAS domain 119 153 1.1E-4 T 14-10-2018 IPR000014 PAS domain C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 446 1.9E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 Gene3D G3DSA:1.10.287.130 223 290 2.3E-23 T 14-10-2018 C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 SUPERFAMILY SSF55785 110 168 4.19E-5 T 14-10-2018 IPR035965 PAS domain superfamily C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 1.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 1.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 1.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 SMART SM00387 335 447 8.3E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 Gene3D G3DSA:3.30.450.20 107 222 8.7E-8 T 14-10-2018 C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 Pfam PF11808 Domain of unknown function (DUF3329) 28 106 9.0E-14 T 14-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 116 443 1.2E-123 T 14-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 Gene3D G3DSA:3.30.565.10 293 448 2.0E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 SUPERFAMILY SSF47384 211 291 3.73E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3Y93_09430 4ef67351fe7adbc056697bf3a2e70c80 452 SMART SM00388 224 290 7.4E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_12670 0915ad8fb401192ce49a86145653811c 240 SUPERFAMILY SSF103025 6 167 2.98E-37 T 14-10-2018 C3Y93_12670 0915ad8fb401192ce49a86145653811c 240 Gene3D G3DSA:3.30.70.1400 6 91 8.5E-21 T 14-10-2018 C3Y93_12670 0915ad8fb401192ce49a86145653811c 240 PIRSF PIRSF006487 84 227 0.51 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 C3Y93_12670 0915ad8fb401192ce49a86145653811c 240 PIRSF PIRSF006487 1 104 2.5E-6 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 C3Y93_12670 0915ad8fb401192ce49a86145653811c 240 Gene3D G3DSA:2.40.30.160 124 232 5.9E-19 T 14-10-2018 C3Y93_12670 0915ad8fb401192ce49a86145653811c 240 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 114 179 1.9E-22 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site C3Y93_12670 0915ad8fb401192ce49a86145653811c 240 Pfam PF01571 Aminomethyltransferase folate-binding domain 6 92 9.3E-6 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain C3Y93_08435 06c9eb4a85f6462ec24cbe7bdfb74ff5 197 SUPERFAMILY SSF54211 90 180 6.7E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_08435 06c9eb4a85f6462ec24cbe7bdfb74ff5 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 C3Y93_08435 06c9eb4a85f6462ec24cbe7bdfb74ff5 197 SUPERFAMILY SSF54211 4 88 2.66E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_08435 06c9eb4a85f6462ec24cbe7bdfb74ff5 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 C3Y93_08435 06c9eb4a85f6462ec24cbe7bdfb74ff5 197 Gene3D G3DSA:3.30.230.40 92 197 1.3E-38 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 C3Y93_08435 06c9eb4a85f6462ec24cbe7bdfb74ff5 197 Gene3D G3DSA:3.30.230.40 1 91 1.1E-37 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 C3Y93_08435 06c9eb4a85f6462ec24cbe7bdfb74ff5 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 2.7E-63 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 C3Y93_08435 06c9eb4a85f6462ec24cbe7bdfb74ff5 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 41.267 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 149 156 6.8E-33 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 209 228 6.8E-33 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 193 202 6.8E-33 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 302 310 6.8E-33 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 6.8E-33 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 234 243 6.8E-33 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 Gene3D G3DSA:3.10.20.30 1 94 1.1E-26 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 Pfam PF00175 Oxidoreductase NAD-binding domain 210 315 3.5E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 SUPERFAMILY SSF54292 2 89 6.69E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 82 1.0E-17 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 Pfam PF00970 Oxidoreductase FAD-binding domain 108 198 8.3E-17 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 Gene3D G3DSA:2.40.30.10 105 199 4.0E-27 T 14-10-2018 C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 Gene3D G3DSA:3.40.50.80 200 339 2.2E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 SUPERFAMILY SSF63380 107 199 5.96E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3Y93_13740 c0915dcdb4870692c72d971c487809b3 353 SUPERFAMILY SSF52343 202 335 1.14E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_03190 9b0748d1c2e154981f0569fc10b05784 138 Gene3D G3DSA:3.30.1390.10 34 138 8.4E-41 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like C3Y93_03190 9b0748d1c2e154981f0569fc10b05784 138 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 49 132 28.319 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS C3Y93_03190 9b0748d1c2e154981f0569fc10b05784 138 SUPERFAMILY SSF54736 52 136 5.23E-32 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like C3Y93_03190 9b0748d1c2e154981f0569fc10b05784 138 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 54 132 9.7E-34 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 C3Y93_13925 dc7f5b3bb18eb805284b2732d6aea01a 249 SMART SM00893 23 211 2.4E-67 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 C3Y93_13925 dc7f5b3bb18eb805284b2732d6aea01a 249 SUPERFAMILY SSF52402 1 242 1.26E-83 T 14-10-2018 C3Y93_13925 dc7f5b3bb18eb805284b2732d6aea01a 249 Gene3D G3DSA:3.40.50.620 1 247 1.0E-84 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_13925 dc7f5b3bb18eb805284b2732d6aea01a 249 PIRSF PIRSF000090 1 249 4.0E-82 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 C3Y93_13925 dc7f5b3bb18eb805284b2732d6aea01a 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 C3Y93_13925 dc7f5b3bb18eb805284b2732d6aea01a 249 Pfam PF01012 Electron transfer flavoprotein domain 30 206 3.1E-46 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 C3Y93_00270 83938cf066e105266bd22983a2949357 217 Gene3D G3DSA:1.20.1260.10 6 217 1.2E-72 T 14-10-2018 IPR012347 Ferritin-like C3Y93_00270 83938cf066e105266bd22983a2949357 217 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 9 59 2.2E-16 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 C3Y93_00270 83938cf066e105266bd22983a2949357 217 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 62 210 1.2E-47 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 C3Y93_00270 83938cf066e105266bd22983a2949357 217 PIRSF PIRSF020736 1 215 7.9E-88 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 C3Y93_00270 83938cf066e105266bd22983a2949357 217 SUPERFAMILY SSF47240 10 214 2.96E-72 T 14-10-2018 IPR009078 Ferritin-like superfamily C3Y93_11480 6ae3ea89636e228c66e714e552705e33 1246 PIRSF PIRSF000980 2 1241 8.0E-150 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 C3Y93_11480 6ae3ea89636e228c66e714e552705e33 1246 Gene3D G3DSA:3.40.50.10930 217 399 3.6E-32 T 14-10-2018 C3Y93_11480 6ae3ea89636e228c66e714e552705e33 1246 Gene3D G3DSA:1.10.486.10 546 766 6.6E-104 T 14-10-2018 C3Y93_11480 6ae3ea89636e228c66e714e552705e33 1246 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 2 1236 14.091 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 C3Y93_11480 6ae3ea89636e228c66e714e552705e33 1246 SUPERFAMILY SSF52540 432 921 1.17E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11480 6ae3ea89636e228c66e714e552705e33 1246 Gene3D G3DSA:3.40.50.300 410 914 6.6E-104 T 14-10-2018 C3Y93_11480 6ae3ea89636e228c66e714e552705e33 1246 SUPERFAMILY SSF52980 934 1233 3.0E-35 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C3Y93_11480 6ae3ea89636e228c66e714e552705e33 1246 SUPERFAMILY SSF52540 3 421 9.03E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11480 6ae3ea89636e228c66e714e552705e33 1246 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 3 913 1.8E-172 T 14-10-2018 C3Y93_11480 6ae3ea89636e228c66e714e552705e33 1246 Gene3D G3DSA:3.40.50.10930 2 100 1.8E-11 T 14-10-2018 C3Y93_06400 614146df1f8f16119257bf93bed4fd25 228 SUPERFAMILY SSF51366 4 219 6.28E-76 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3Y93_06400 614146df1f8f16119257bf93bed4fd25 228 Gene3D G3DSA:3.20.20.70 6 223 1.1E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_06400 614146df1f8f16119257bf93bed4fd25 228 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C3Y93_06400 614146df1f8f16119257bf93bed4fd25 228 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 217 1.5E-97 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C3Y93_06400 614146df1f8f16119257bf93bed4fd25 228 PIRSF PIRSF001461 1 227 5.3E-103 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C3Y93_06400 614146df1f8f16119257bf93bed4fd25 228 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 204 7.8E-89 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C3Y93_06400 614146df1f8f16119257bf93bed4fd25 228 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 137 159 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C3Y93_01650 0b4059b40856a77fc21b30a1f6e617da 260 PIRSF PIRSF009320 2 113 6.1E-16 T 14-10-2018 C3Y93_01650 0b4059b40856a77fc21b30a1f6e617da 260 PIRSF PIRSF009320 85 260 1.4E-8 T 14-10-2018 C3Y93_01650 0b4059b40856a77fc21b30a1f6e617da 260 Pfam PF13614 AAA domain 3 177 6.8E-60 T 14-10-2018 IPR025669 AAA domain C3Y93_01650 0b4059b40856a77fc21b30a1f6e617da 260 Gene3D G3DSA:3.40.50.300 1 259 3.8E-79 T 14-10-2018 C3Y93_01650 0b4059b40856a77fc21b30a1f6e617da 260 SUPERFAMILY SSF52540 1 252 1.06E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 SUPERFAMILY SSF51735 222 457 5.52E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 Gene3D G3DSA:3.40.50.720 221 462 1.4E-59 T 14-10-2018 C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 232 456 4.6E-45 T 14-10-2018 C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 Gene3D G3DSA:3.40.50.720 24 219 6.4E-54 T 14-10-2018 C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 297 308 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 423 443 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 244 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 390 407 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 370 389 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 344 360 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 226 400 2.5E-5 T 14-10-2018 C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 370 389 1.3E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 350 358 1.3E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 297 308 1.3E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03590 0f7f874fdabc58e67520d1c41149ab1d 463 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 357 385 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3Y93_02655 bff45d4b9a9da9523e4f848f2601c327 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 7.0E-27 T 14-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 C3Y93_02655 bff45d4b9a9da9523e4f848f2601c327 96 PIRSF PIRSF001486 1 94 5.8E-50 T 14-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 C3Y93_02655 bff45d4b9a9da9523e4f848f2601c327 96 SUPERFAMILY SSF54909 1 95 4.29E-40 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel C3Y93_02655 bff45d4b9a9da9523e4f848f2601c327 96 Gene3D G3DSA:3.30.70.1060 1 94 3.0E-37 T 14-10-2018 C3Y93_02655 bff45d4b9a9da9523e4f848f2601c327 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 4.4E-49 T 14-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 C3Y93_02655 bff45d4b9a9da9523e4f848f2601c327 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 3.2E-42 T 14-10-2018 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 C3Y93_09565 f03b23203e53801848576a005322639a 340 Pfam PF00107 Zinc-binding dehydrogenase 179 301 3.8E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C3Y93_09565 f03b23203e53801848576a005322639a 340 SMART SM00829 14 335 9.8E-9 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C3Y93_09565 f03b23203e53801848576a005322639a 340 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 172 199 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 C3Y93_09565 f03b23203e53801848576a005322639a 340 SUPERFAMILY SSF50129 3 335 1.89E-42 T 14-10-2018 IPR011032 GroES-like superfamily C3Y93_09565 f03b23203e53801848576a005322639a 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 C3Y93_09565 f03b23203e53801848576a005322639a 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 137 6.0E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C3Y93_09565 f03b23203e53801848576a005322639a 340 Gene3D G3DSA:3.40.50.720 153 307 1.2E-114 T 14-10-2018 C3Y93_09565 f03b23203e53801848576a005322639a 340 SUPERFAMILY SSF51735 142 305 1.21E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_09565 f03b23203e53801848576a005322639a 340 Gene3D G3DSA:3.90.180.10 15 335 1.2E-114 T 14-10-2018 C3Y93_00355 3b1e36522f8feee5f353f87d00f8ca49 457 Gene3D G3DSA:3.40.640.10 71 338 2.8E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_00355 3b1e36522f8feee5f353f87d00f8ca49 457 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 15 455 8.0E-253 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 C3Y93_00355 3b1e36522f8feee5f353f87d00f8ca49 457 Gene3D G3DSA:3.90.1150.10 23 441 2.8E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_00355 3b1e36522f8feee5f353f87d00f8ca49 457 Pfam PF00202 Aminotransferase class-III 34 447 3.7E-95 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3Y93_00355 3b1e36522f8feee5f353f87d00f8ca49 457 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3Y93_00355 3b1e36522f8feee5f353f87d00f8ca49 457 SUPERFAMILY SSF53383 24 448 3.94E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_00355 3b1e36522f8feee5f353f87d00f8ca49 457 PIRSF PIRSF000521 18 143 2.4E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3Y93_00355 3b1e36522f8feee5f353f87d00f8ca49 457 PIRSF PIRSF000521 130 450 2.5E-34 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3Y93_12380 d571898a922d3cf9ae248034ba4ba4db 406 Gene3D G3DSA:3.60.70.12 7 276 5.8E-90 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C3Y93_12380 d571898a922d3cf9ae248034ba4ba4db 406 SUPERFAMILY SSF56266 14 403 6.28E-139 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C3Y93_12380 d571898a922d3cf9ae248034ba4ba4db 406 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 13 406 1.5E-121 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C3Y93_12380 d571898a922d3cf9ae248034ba4ba4db 406 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 31 404 9.0E-177 T 14-10-2018 C3Y93_12380 d571898a922d3cf9ae248034ba4ba4db 406 Pfam PF01960 ArgJ family 20 406 5.8E-141 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C3Y93_12380 d571898a922d3cf9ae248034ba4ba4db 406 Gene3D G3DSA:3.10.20.340 277 406 1.9E-43 T 14-10-2018 C3Y93_12380 d571898a922d3cf9ae248034ba4ba4db 406 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 406 152.758 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C3Y93_13260 f01ee78f78372e464e98bc60f3b85172 424 Gene3D G3DSA:1.10.230.10 271 377 2.5E-146 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain C3Y93_13260 f01ee78f78372e464e98bc60f3b85172 424 Gene3D G3DSA:2.20.28.60 2 52 1.7E-23 T 14-10-2018 C3Y93_13260 f01ee78f78372e464e98bc60f3b85172 424 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 1.1E-237 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 C3Y93_13260 f01ee78f78372e464e98bc60f3b85172 424 PRINTS PR00143 Citrate synthase signature 167 180 3.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3Y93_13260 f01ee78f78372e464e98bc60f3b85172 424 PRINTS PR00143 Citrate synthase signature 360 376 3.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3Y93_13260 f01ee78f78372e464e98bc60f3b85172 424 PRINTS PR00143 Citrate synthase signature 244 272 3.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3Y93_13260 f01ee78f78372e464e98bc60f3b85172 424 PRINTS PR00143 Citrate synthase signature 380 394 3.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3Y93_13260 f01ee78f78372e464e98bc60f3b85172 424 PRINTS PR00143 Citrate synthase signature 222 237 3.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3Y93_13260 f01ee78f78372e464e98bc60f3b85172 424 PRINTS PR00143 Citrate synthase signature 297 317 3.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3Y93_13260 f01ee78f78372e464e98bc60f3b85172 424 Pfam PF00285 Citrate synthase, C-terminal domain 48 411 1.9E-135 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3Y93_13260 f01ee78f78372e464e98bc60f3b85172 424 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 C3Y93_13260 f01ee78f78372e464e98bc60f3b85172 424 PIRSF PIRSF001369 40 424 2.2E-169 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type C3Y93_13260 f01ee78f78372e464e98bc60f3b85172 424 Gene3D G3DSA:1.10.580.10 59 411 2.5E-146 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 C3Y93_13260 f01ee78f78372e464e98bc60f3b85172 424 SUPERFAMILY SSF48256 6 422 4.71E-166 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 C3Y93_00315 0c32c6173d1d2ec1b97887e427f01323 306 SUPERFAMILY SSF103481 36 140 2.35E-8 T 14-10-2018 C3Y93_00315 0c32c6173d1d2ec1b97887e427f01323 306 Pfam PF00892 EamA-like transporter family 3 139 5.6E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_00315 0c32c6173d1d2ec1b97887e427f01323 306 TIGRFAM TIGR00688 rarD: protein RarD 3 254 3.1E-47 T 14-10-2018 IPR004626 RarD protein GO:0005887 C3Y93_08260 f9138d9664cb66ec1072f82639b236eb 359 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 15 352 2.1E-114 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 C3Y93_08260 f9138d9664cb66ec1072f82639b236eb 359 Gene3D G3DSA:3.40.50.1970 1 171 4.5E-66 T 14-10-2018 C3Y93_08260 f9138d9664cb66ec1072f82639b236eb 359 Pfam PF01761 3-dehydroquinate synthase 66 323 2.0E-107 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 C3Y93_08260 f9138d9664cb66ec1072f82639b236eb 359 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 69.685 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 C3Y93_08260 f9138d9664cb66ec1072f82639b236eb 359 SUPERFAMILY SSF56796 3 354 2.22E-113 T 14-10-2018 C3Y93_08260 f9138d9664cb66ec1072f82639b236eb 359 Gene3D G3DSA:1.20.1090.10 172 359 5.1E-72 T 14-10-2018 C3Y93_08260 f9138d9664cb66ec1072f82639b236eb 359 PIRSF PIRSF001455 5 359 2.3E-105 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 C3Y93_00540 df9ced73936728e9019a100bb6adbe68 674 Gene3D G3DSA:3.10.620.30 337 509 2.5E-22 T 14-10-2018 C3Y93_00540 df9ced73936728e9019a100bb6adbe68 674 Pfam PF01841 Transglutaminase-like superfamily 371 479 1.5E-23 T 14-10-2018 IPR002931 Transglutaminase-like C3Y93_00540 df9ced73936728e9019a100bb6adbe68 674 SMART SM00460 411 481 1.6E-18 T 14-10-2018 IPR002931 Transglutaminase-like C3Y93_00540 df9ced73936728e9019a100bb6adbe68 674 Pfam PF11992 Domain of unknown function (DUF3488) 9 313 3.2E-73 T 14-10-2018 IPR021878 Protein of unknown function DUF3488 C3Y93_00540 df9ced73936728e9019a100bb6adbe68 674 SUPERFAMILY SSF54001 347 593 1.4E-49 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily C3Y93_01860 3ec869a4328c85c9c0d9e68369ccf7c4 299 SUPERFAMILY SSF46785 4 86 3.4E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_01860 3ec869a4328c85c9c0d9e68369ccf7c4 299 Gene3D G3DSA:3.40.190.10 166 267 7.5E-59 T 14-10-2018 C3Y93_01860 3ec869a4328c85c9c0d9e68369ccf7c4 299 Gene3D G3DSA:1.10.10.10 3 90 4.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_01860 3ec869a4328c85c9c0d9e68369ccf7c4 299 SUPERFAMILY SSF53850 90 296 1.36E-41 T 14-10-2018 C3Y93_01860 3ec869a4328c85c9c0d9e68369ccf7c4 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.1E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_01860 3ec869a4328c85c9c0d9e68369ccf7c4 299 Pfam PF03466 LysR substrate binding domain 90 296 1.2E-40 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_01860 3ec869a4328c85c9c0d9e68369ccf7c4 299 Gene3D G3DSA:3.40.190.10 92 294 7.5E-59 T 14-10-2018 C3Y93_09570 e06a904c7d073f24970a3a2863c90b13 234 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 33 136 4.0E-24 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 C3Y93_09570 e06a904c7d073f24970a3a2863c90b13 234 Gene3D G3DSA:1.10.287.460 39 95 7.0E-12 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 C3Y93_09570 e06a904c7d073f24970a3a2863c90b13 234 Gene3D G3DSA:3.10.50.40 96 234 6.0E-58 T 14-10-2018 C3Y93_09570 e06a904c7d073f24970a3a2863c90b13 234 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 143 231 3.4E-31 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain C3Y93_09570 e06a904c7d073f24970a3a2863c90b13 234 SUPERFAMILY SSF54534 41 234 8.45E-60 T 14-10-2018 C3Y93_10430 a54289e62c976b90bb6772dbefd9d7f8 232 Pfam PF07885 Ion channel 132 214 8.2E-6 T 14-10-2018 IPR013099 Potassium channel domain C3Y93_10430 a54289e62c976b90bb6772dbefd9d7f8 232 SUPERFAMILY SSF81324 125 215 1.18E-9 T 14-10-2018 C3Y93_10430 a54289e62c976b90bb6772dbefd9d7f8 232 Gene3D G3DSA:1.10.287.70 112 217 6.2E-11 T 14-10-2018 C3Y93_01605 dc4ad6a49ece78d218e46d3a0bd5c1a3 158 SUPERFAMILY SSF52540 27 126 1.83E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01605 dc4ad6a49ece78d218e46d3a0bd5c1a3 158 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 9 140 2.4E-40 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 C3Y93_01605 dc4ad6a49ece78d218e46d3a0bd5c1a3 158 Gene3D G3DSA:3.40.50.300 3 155 1.3E-39 T 14-10-2018 C3Y93_01605 dc4ad6a49ece78d218e46d3a0bd5c1a3 158 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 131 9.5E-37 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 C3Y93_13145 068af48c4585d11d4c92704d763d987a 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.8E-49 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 C3Y93_13145 068af48c4585d11d4c92704d763d987a 317 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 48.494 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 C3Y93_13145 068af48c4585d11d4c92704d763d987a 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 197 313 3.7E-28 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 C3Y93_13145 068af48c4585d11d4c92704d763d987a 317 SMART SM01400 4 121 2.0E-77 T 14-10-2018 C3Y93_13145 068af48c4585d11d4c92704d763d987a 317 SUPERFAMILY SSF53271 69 306 5.95E-65 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3Y93_13145 068af48c4585d11d4c92704d763d987a 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 314 7.3E-121 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 C3Y93_13145 068af48c4585d11d4c92704d763d987a 317 SUPERFAMILY SSF53271 4 103 4.18E-5 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3Y93_13145 068af48c4585d11d4c92704d763d987a 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 C3Y93_13145 068af48c4585d11d4c92704d763d987a 317 Gene3D G3DSA:3.40.50.2020 148 290 1.1E-130 T 14-10-2018 C3Y93_13145 068af48c4585d11d4c92704d763d987a 317 Gene3D G3DSA:3.40.50.2020 7 302 1.1E-130 T 14-10-2018 C3Y93_09620 042ff6dad4efa33ba30c7ad6ef3c017b 233 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 82 178 2.7E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3Y93_09620 042ff6dad4efa33ba30c7ad6ef3c017b 233 SUPERFAMILY SSF56784 1 218 2.4E-56 T 14-10-2018 IPR036412 HAD-like superfamily C3Y93_09620 042ff6dad4efa33ba30c7ad6ef3c017b 233 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 184 8.0E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3Y93_09620 042ff6dad4efa33ba30c7ad6ef3c017b 233 Gene3D G3DSA:3.40.50.1000 4 192 9.3E-52 T 14-10-2018 IPR023214 HAD superfamily C3Y93_09620 042ff6dad4efa33ba30c7ad6ef3c017b 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 184 1.3E-35 T 14-10-2018 C3Y93_09620 042ff6dad4efa33ba30c7ad6ef3c017b 233 Gene3D G3DSA:1.10.150.240 16 84 9.3E-52 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 C3Y93_05210 598b6bec04384e554527c7cf3dbdf425 501 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 277 482 7.8E-54 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_05210 598b6bec04384e554527c7cf3dbdf425 501 SMART SM00479 274 444 2.0E-36 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3Y93_05210 598b6bec04384e554527c7cf3dbdf425 501 Gene3D G3DSA:3.30.420.10 1 153 2.5E-52 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_05210 598b6bec04384e554527c7cf3dbdf425 501 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 274 492 1.7E-76 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_05210 598b6bec04384e554527c7cf3dbdf425 501 SUPERFAMILY SSF53098 267 443 7.59E-46 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_05210 598b6bec04384e554527c7cf3dbdf425 501 Pfam PF00075 RNase H 4 136 8.6E-42 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 C3Y93_05210 598b6bec04384e554527c7cf3dbdf425 501 Gene3D G3DSA:3.30.420.10 268 448 1.5E-46 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_05210 598b6bec04384e554527c7cf3dbdf425 501 Hamap MF_00042 Ribonuclease H [rnhA]. 2 145 27.408 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 C3Y93_05210 598b6bec04384e554527c7cf3dbdf425 501 Pfam PF00929 Exonuclease 276 435 3.1E-30 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3Y93_05210 598b6bec04384e554527c7cf3dbdf425 501 SUPERFAMILY SSF53098 4 138 1.9E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_13510 2a55def02ee806d65dda7b812bc738da 306 Pfam PF01171 PP-loop family 49 213 1.2E-14 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 C3Y93_13510 2a55def02ee806d65dda7b812bc738da 306 Gene3D G3DSA:3.40.50.620 21 294 3.9E-45 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_13510 2a55def02ee806d65dda7b812bc738da 306 PIRSF PIRSF004976 9 298 1.8E-69 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 C3Y93_13510 2a55def02ee806d65dda7b812bc738da 306 SUPERFAMILY SSF52402 26 243 2.56E-53 T 14-10-2018 C3Y93_13510 2a55def02ee806d65dda7b812bc738da 306 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 17 279 54.942 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 C3Y93_10315 500c5bb63b0ca639c03da82bf94113d0 1115 Gene3D G3DSA:3.40.50.300 869 1072 1.1E-81 T 14-10-2018 C3Y93_10315 500c5bb63b0ca639c03da82bf94113d0 1115 SUPERFAMILY SSF52540 637 862 3.8E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_10315 500c5bb63b0ca639c03da82bf94113d0 1115 Gene3D G3DSA:1.20.120.850 884 1107 1.1E-81 T 14-10-2018 C3Y93_10315 500c5bb63b0ca639c03da82bf94113d0 1115 Pfam PF00271 Helicase conserved C-terminal domain 949 1058 4.6E-19 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_10315 500c5bb63b0ca639c03da82bf94113d0 1115 SUPERFAMILY SSF52540 864 1113 5.5E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_10315 500c5bb63b0ca639c03da82bf94113d0 1115 Gene3D G3DSA:3.40.50.10810 651 863 1.2E-66 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily C3Y93_10315 500c5bb63b0ca639c03da82bf94113d0 1115 Pfam PF04434 SWIM zinc finger 60 85 1.3E-4 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 C3Y93_10315 500c5bb63b0ca639c03da82bf94113d0 1115 Pfam PF00176 SNF2 family N-terminal domain 664 934 6.7E-67 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 C3Y93_10315 500c5bb63b0ca639c03da82bf94113d0 1115 SMART SM00487 646 831 1.8E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3Y93_10315 500c5bb63b0ca639c03da82bf94113d0 1115 SMART SM00490 978 1058 9.6E-23 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_00750 ecc9587dda7837b9db411626792063ec 258 SUPERFAMILY SSF51735 2 156 4.31E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_00750 ecc9587dda7837b9db411626792063ec 258 Gene3D G3DSA:1.10.1040.20 156 256 8.3E-34 T 14-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily C3Y93_00750 ecc9587dda7837b9db411626792063ec 258 SUPERFAMILY SSF48179 159 256 5.78E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3Y93_00750 ecc9587dda7837b9db411626792063ec 258 Gene3D G3DSA:3.40.50.720 1 154 5.8E-43 T 14-10-2018 C3Y93_00750 ecc9587dda7837b9db411626792063ec 258 Pfam PF10728 Domain of unknown function (DUF2520) 126 251 6.2E-29 T 14-10-2018 IPR018931 Domain of unknown function DUF2520 C3Y93_00750 ecc9587dda7837b9db411626792063ec 258 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 89 4.3E-11 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 Gene3D G3DSA:3.10.450.50 841 904 6.6E-7 T 14-10-2018 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 SMART SM00958 228 355 1.1E-70 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 SUPERFAMILY SSF52540 6 412 2.02E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 SMART SM00957 6 399 3.3E-291 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 Gene3D G3DSA:3.90.1440.10 229 365 6.3E-171 T 14-10-2018 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 PRINTS PR00906 SecA protein signature 117 127 9.2E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 PRINTS PR00906 SecA protein signature 101 115 9.2E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 PRINTS PR00906 SecA protein signature 410 423 9.2E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 PRINTS PR00906 SecA protein signature 336 358 9.2E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 PRINTS PR00906 SecA protein signature 373 390 9.2E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 PRINTS PR00906 SecA protein signature 63 87 9.2E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 PRINTS PR00906 SecA protein signature 170 190 9.2E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 Pfam PF01043 SecA preprotein cross-linking domain 232 355 1.7E-36 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 Pfam PF07516 SecA Wing and Scaffold domain 615 827 1.4E-66 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 Gene3D G3DSA:3.40.50.300 414 618 5.6E-84 T 14-10-2018 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 Gene3D G3DSA:1.10.3060.10 619 830 1.2E-72 T 14-10-2018 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 SUPERFAMILY SSF81767 227 365 2.88E-40 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 SUPERFAMILY SSF52540 413 616 3.23E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 814 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 Pfam PF02810 SEC-C motif 885 903 2.0E-9 T 14-10-2018 IPR004027 SEC-C motif C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 SUPERFAMILY SSF81886 618 893 8.76E-80 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 Gene3D G3DSA:3.40.50.300 22 412 6.3E-171 T 14-10-2018 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 ProSitePatterns PS01312 SecA family signature. 498 513 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 Pfam PF07517 SecA DEAD-like domain 8 399 6.2E-129 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 C3Y93_12370 d77b05930746e96d278017f28f1d00d5 904 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 830 19.715 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C3Y93_07460 4a901d2507b8a47633acf115a5f8fe6d 729 SUPERFAMILY SSF56935 37 729 7.33E-120 T 14-10-2018 C3Y93_07460 4a901d2507b8a47633acf115a5f8fe6d 729 Gene3D G3DSA:2.40.170.20 173 729 3.8E-128 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C3Y93_07460 4a901d2507b8a47633acf115a5f8fe6d 729 Gene3D G3DSA:2.170.130.10 36 167 1.2E-39 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3Y93_07460 4a901d2507b8a47633acf115a5f8fe6d 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 162 7.5E-29 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3Y93_07460 4a901d2507b8a47633acf115a5f8fe6d 729 Pfam PF00593 TonB dependent receptor 208 728 1.8E-49 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3Y93_05400 73bfd25250c89a64af7498df23c5e2d9 249 Gene3D G3DSA:1.10.10.10 1 66 8.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_05400 73bfd25250c89a64af7498df23c5e2d9 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 65 1.5E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3Y93_05400 73bfd25250c89a64af7498df23c5e2d9 249 SMART SM00895 95 223 1.2E-20 T 14-10-2018 IPR011711 GntR, C-terminal C3Y93_05400 73bfd25250c89a64af7498df23c5e2d9 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 7.5E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3Y93_05400 73bfd25250c89a64af7498df23c5e2d9 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 7.5E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3Y93_05400 73bfd25250c89a64af7498df23c5e2d9 249 Gene3D G3DSA:1.20.120.530 94 229 2.4E-30 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal C3Y93_05400 73bfd25250c89a64af7498df23c5e2d9 249 SUPERFAMILY SSF46785 3 70 5.54E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_05400 73bfd25250c89a64af7498df23c5e2d9 249 Pfam PF07729 FCD domain 96 222 1.9E-23 T 14-10-2018 IPR011711 GntR, C-terminal C3Y93_05400 73bfd25250c89a64af7498df23c5e2d9 249 SUPERFAMILY SSF48008 94 228 5.75E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal C3Y93_05400 73bfd25250c89a64af7498df23c5e2d9 249 SMART SM00345 7 66 9.3E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3Y93_04175 d0785f2ae931f481ee8b81fd0bb5d8fd 473 SMART SM00840 349 411 9.9E-22 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 C3Y93_04175 d0785f2ae931f481ee8b81fd0bb5d8fd 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 5.6E-31 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 C3Y93_04175 d0785f2ae931f481ee8b81fd0bb5d8fd 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 5.6E-31 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 C3Y93_04175 d0785f2ae931f481ee8b81fd0bb5d8fd 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 226 247 5.6E-31 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 C3Y93_04175 d0785f2ae931f481ee8b81fd0bb5d8fd 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 195 213 5.6E-31 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 C3Y93_04175 d0785f2ae931f481ee8b81fd0bb5d8fd 473 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 317 3.4E-133 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 C3Y93_04175 d0785f2ae931f481ee8b81fd0bb5d8fd 473 Pfam PF09190 DALR domain 349 411 1.1E-20 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 C3Y93_04175 d0785f2ae931f481ee8b81fd0bb5d8fd 473 SUPERFAMILY SSF52374 6 316 5.38E-97 T 14-10-2018 C3Y93_04175 d0785f2ae931f481ee8b81fd0bb5d8fd 473 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 472 38.596 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 C3Y93_04175 d0785f2ae931f481ee8b81fd0bb5d8fd 473 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 5 471 6.3E-178 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 C3Y93_04175 d0785f2ae931f481ee8b81fd0bb5d8fd 473 Gene3D G3DSA:3.40.50.620 1 309 6.8E-136 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_04175 d0785f2ae931f481ee8b81fd0bb5d8fd 473 SUPERFAMILY SSF47323 335 471 1.7E-35 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_04175 d0785f2ae931f481ee8b81fd0bb5d8fd 473 Gene3D G3DSA:1.20.120.640 311 472 6.2E-42 T 14-10-2018 C3Y93_03350 3f25e5aa4f493b0d07df96b8094a1bc3 370 Pfam PF00793 DAHP synthetase I family 60 355 2.0E-95 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C3Y93_03350 3f25e5aa4f493b0d07df96b8094a1bc3 370 Gene3D G3DSA:3.20.20.70 18 366 4.3E-154 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_03350 3f25e5aa4f493b0d07df96b8094a1bc3 370 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 22 365 1.1E-153 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 C3Y93_03350 3f25e5aa4f493b0d07df96b8094a1bc3 370 SUPERFAMILY SSF51569 23 364 1.88E-133 T 14-10-2018 C3Y93_03350 3f25e5aa4f493b0d07df96b8094a1bc3 370 PIRSF PIRSF001361 9 369 1.8E-159 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 C3Y93_07995 4f59e36fb42ea56c925df1de5048945b 110 Pfam PF08888 HopJ type III effector protein 4 107 2.4E-42 T 14-10-2018 IPR014984 HopJ type III effector protein C3Y93_07995 4f59e36fb42ea56c925df1de5048945b 110 Gene3D G3DSA:3.20.160.10 1 110 1.9E-44 T 14-10-2018 IPR038604 Type III effector HopJ superfamily C3Y93_05760 f30115def03ff918c72b13a2b222b0df 189 Gene3D G3DSA:2.70.40.10 1 161 1.4E-55 T 14-10-2018 IPR036157 dUTPase-like superfamily C3Y93_05760 f30115def03ff918c72b13a2b222b0df 189 SUPERFAMILY SSF51283 3 188 5.76E-55 T 14-10-2018 IPR036157 dUTPase-like superfamily C3Y93_05760 f30115def03ff918c72b13a2b222b0df 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 188 1.4E-51 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 C3Y93_05760 f30115def03ff918c72b13a2b222b0df 189 Pfam PF00692 dUTPase 72 184 7.5E-9 T 14-10-2018 IPR029054 dUTPase-like C3Y93_05760 f30115def03ff918c72b13a2b222b0df 189 Hamap MF_00146 dCTP deaminase [dcd]. 1 189 28.993 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 C3Y93_11970 186640f9e6d5003212f4837b6f213809 635 Gene3D G3DSA:1.10.287.380 551 635 2.2E-21 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 C3Y93_11970 186640f9e6d5003212f4837b6f213809 635 SMART SM00382 344 514 5.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_11970 186640f9e6d5003212f4837b6f213809 635 SMART SM00382 28 229 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_11970 186640f9e6d5003212f4837b6f213809 635 Gene3D G3DSA:3.40.50.300 281 550 2.1E-57 T 14-10-2018 C3Y93_11970 186640f9e6d5003212f4837b6f213809 635 Pfam PF00005 ABC transporter 19 183 7.7E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_11970 186640f9e6d5003212f4837b6f213809 635 Pfam PF00005 ABC transporter 336 468 1.2E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_11970 186640f9e6d5003212f4837b6f213809 635 SUPERFAMILY SSF52540 3 242 7.14E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11970 186640f9e6d5003212f4837b6f213809 635 Pfam PF12848 ABC transporter 223 296 5.2E-12 T 14-10-2018 IPR032781 ABC-transporter extension domain C3Y93_11970 186640f9e6d5003212f4837b6f213809 635 Pfam PF16326 ABC transporter C-terminal domain 561 629 3.7E-19 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 C3Y93_11970 186640f9e6d5003212f4837b6f213809 635 Gene3D G3DSA:3.40.50.300 4 278 4.8E-65 T 14-10-2018 C3Y93_11970 186640f9e6d5003212f4837b6f213809 635 SUPERFAMILY SSF52540 299 502 1.04E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11970 186640f9e6d5003212f4837b6f213809 635 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_08780 72a9b3e0db5e6f1f8abdb4d914a870de 96 Gene3D G3DSA:1.10.260.40 32 93 7.8E-6 T 14-10-2018 C3Y93_08780 72a9b3e0db5e6f1f8abdb4d914a870de 96 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 7 93 1.8E-38 T 14-10-2018 IPR014057 Uncharacterized protein HI1420 C3Y93_08780 72a9b3e0db5e6f1f8abdb4d914a870de 96 SUPERFAMILY SSF47413 25 91 5.18E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_08780 72a9b3e0db5e6f1f8abdb4d914a870de 96 Pfam PF01381 Helix-turn-helix 47 92 6.0E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_11105 3ea1eb046812919983aa1c29ab527d81 146 Gene3D G3DSA:1.20.5.1030 88 144 7.8E-15 T 14-10-2018 IPR038379 SecE superfamily C3Y93_11105 3ea1eb046812919983aa1c29ab527d81 146 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 93 121 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3Y93_11105 3ea1eb046812919983aa1c29ab527d81 146 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 91 145 8.1E-17 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 C3Y93_11105 3ea1eb046812919983aa1c29ab527d81 146 PRINTS PR01650 Bacterial translocase SecE signature 131 146 4.0E-15 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 C3Y93_11105 3ea1eb046812919983aa1c29ab527d81 146 PRINTS PR01650 Bacterial translocase SecE signature 87 107 4.0E-15 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 C3Y93_11105 3ea1eb046812919983aa1c29ab527d81 146 PRINTS PR01650 Bacterial translocase SecE signature 66 87 4.0E-15 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 C3Y93_11105 3ea1eb046812919983aa1c29ab527d81 146 PRINTS PR01650 Bacterial translocase SecE signature 111 131 4.0E-15 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 C3Y93_11105 3ea1eb046812919983aa1c29ab527d81 146 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 94 144 3.2E-16 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3Y93_11105 3ea1eb046812919983aa1c29ab527d81 146 Hamap MF_00422 Protein translocase subunit SecE [secE]. 88 143 11.894 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C3Y93_02445 e56687c3d6eb7a700fb96a0082c27ec7 320 SUPERFAMILY SSF52518 2 319 2.21E-90 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3Y93_02445 e56687c3d6eb7a700fb96a0082c27ec7 320 Gene3D G3DSA:3.40.50.970 1 320 7.9E-112 T 14-10-2018 C3Y93_02445 e56687c3d6eb7a700fb96a0082c27ec7 320 Pfam PF00676 Dehydrogenase E1 component 14 309 1.7E-83 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 C3Y93_08175 cc3f29885c20b6904980a77b4741321f 154 Pfam PF00210 Ferritin-like domain 8 142 2.9E-31 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 C3Y93_08175 cc3f29885c20b6904980a77b4741321f 154 PIRSF PIRSF002560 1 154 2.0E-60 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_08175 cc3f29885c20b6904980a77b4741321f 154 PRINTS PR00601 Bacterioferritin signature 23 43 2.4E-54 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_08175 cc3f29885c20b6904980a77b4741321f 154 PRINTS PR00601 Bacterioferritin signature 3 22 2.4E-54 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_08175 cc3f29885c20b6904980a77b4741321f 154 PRINTS PR00601 Bacterioferritin signature 44 64 2.4E-54 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_08175 cc3f29885c20b6904980a77b4741321f 154 PRINTS PR00601 Bacterioferritin signature 107 127 2.4E-54 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_08175 cc3f29885c20b6904980a77b4741321f 154 PRINTS PR00601 Bacterioferritin signature 128 149 2.4E-54 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_08175 cc3f29885c20b6904980a77b4741321f 154 PRINTS PR00601 Bacterioferritin signature 65 85 2.4E-54 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_08175 cc3f29885c20b6904980a77b4741321f 154 PRINTS PR00601 Bacterioferritin signature 86 106 2.4E-54 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_08175 cc3f29885c20b6904980a77b4741321f 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_08175 cc3f29885c20b6904980a77b4741321f 154 Gene3D G3DSA:1.20.1260.10 1 154 1.1E-56 T 14-10-2018 IPR012347 Ferritin-like C3Y93_08175 cc3f29885c20b6904980a77b4741321f 154 SUPERFAMILY SSF47240 1 154 5.64E-42 T 14-10-2018 IPR009078 Ferritin-like superfamily C3Y93_08175 cc3f29885c20b6904980a77b4741321f 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 2.5E-61 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_14005 fdfe82d5e3740e591103b5b06f0317d6 411 Pfam PF12704 MacB-like periplasmic core domain 28 240 3.9E-13 T 14-10-2018 IPR025857 MacB-like periplasmic core domain C3Y93_14005 fdfe82d5e3740e591103b5b06f0317d6 411 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 411 6.2E-153 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 C3Y93_14005 fdfe82d5e3740e591103b5b06f0317d6 411 Pfam PF02687 FtsX-like permease family 298 404 1.0E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 SMART SM01192 142 427 2.2E-211 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 SUPERFAMILY SSF54826 4 137 1.86E-55 T 14-10-2018 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 425 1.8E-132 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 PIRSF PIRSF001400 1 427 1.3E-190 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 2.3E-202 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 PRINTS PR00148 Enolase signature 367 384 2.7E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 PRINTS PR00148 Enolase signature 164 177 2.7E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 PRINTS PR00148 Enolase signature 37 51 2.7E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 PRINTS PR00148 Enolase signature 338 352 2.7E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 PRINTS PR00148 Enolase signature 107 123 2.7E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 PRINTS PR00148 Enolase signature 315 326 2.7E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 Gene3D G3DSA:3.20.20.120 128 429 3.0E-131 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 Pfam PF03952 Enolase, N-terminal domain 4 134 1.2E-58 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 Hamap MF_00318 Enolase [eno]. 2 415 44.268 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 SMART SM01193 4 134 1.6E-91 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 SUPERFAMILY SSF51604 143 416 1.15E-125 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily C3Y93_03390 3436321ffc8e6af409d9fc7fe0eca775 429 Gene3D G3DSA:3.30.390.10 1 127 3.4E-55 T 14-10-2018 IPR029017 Enolase-like, N-terminal C3Y93_06115 612cd7cc39ff15b2e2a5038a1dc22632 445 SMART SM00382 155 298 6.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_06115 612cd7cc39ff15b2e2a5038a1dc22632 445 SUPERFAMILY SSF46689 346 444 2.11E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_06115 612cd7cc39ff15b2e2a5038a1dc22632 445 Pfam PF02954 Bacterial regulatory protein, Fis family 406 443 4.0E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3Y93_06115 612cd7cc39ff15b2e2a5038a1dc22632 445 Pfam PF00158 Sigma-54 interaction domain 138 301 1.7E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C3Y93_06115 612cd7cc39ff15b2e2a5038a1dc22632 445 SUPERFAMILY SSF52540 139 377 4.97E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_06115 612cd7cc39ff15b2e2a5038a1dc22632 445 Gene3D G3DSA:1.10.10.60 401 445 1.4E-8 T 14-10-2018 C3Y93_06115 612cd7cc39ff15b2e2a5038a1dc22632 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 221 236 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C3Y93_06115 612cd7cc39ff15b2e2a5038a1dc22632 445 Gene3D G3DSA:3.40.50.300 124 305 8.4E-60 T 14-10-2018 C3Y93_06115 612cd7cc39ff15b2e2a5038a1dc22632 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 159 172 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C3Y93_06115 612cd7cc39ff15b2e2a5038a1dc22632 445 Gene3D G3DSA:1.10.8.60 306 385 4.9E-20 T 14-10-2018 C3Y93_06115 612cd7cc39ff15b2e2a5038a1dc22632 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 346 355 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C3Y93_13830 5038841356c5dde4ac78fdb00a0b7068 292 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 13 291 8.3E-96 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 C3Y93_13830 5038841356c5dde4ac78fdb00a0b7068 292 Pfam PF01040 UbiA prenyltransferase family 31 273 3.1E-57 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 C3Y93_13830 5038841356c5dde4ac78fdb00a0b7068 292 Gene3D G3DSA:1.10.357.140 26 188 3.1E-39 T 14-10-2018 C3Y93_13830 5038841356c5dde4ac78fdb00a0b7068 292 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 8 292 28.3 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 C3Y93_09480 4351abc1b0e1e8db9b8ff1ff62bd164d 687 SUPERFAMILY SSF140356 8 110 2.49E-32 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 C3Y93_09480 4351abc1b0e1e8db9b8ff1ff62bd164d 687 Hamap MF_00347 Polyphosphate kinase [ppk]. 8 685 27.521 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 C3Y93_09480 4351abc1b0e1e8db9b8ff1ff62bd164d 687 SUPERFAMILY SSF143724 114 315 1.28E-61 T 14-10-2018 C3Y93_09480 4351abc1b0e1e8db9b8ff1ff62bd164d 687 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 11 681 2.8E-276 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 C3Y93_09480 4351abc1b0e1e8db9b8ff1ff62bd164d 687 Pfam PF02503 Polyphosphate kinase middle domain 126 323 5.6E-61 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 C3Y93_09480 4351abc1b0e1e8db9b8ff1ff62bd164d 687 Gene3D G3DSA:3.30.870.10 502 686 1.3E-64 T 14-10-2018 C3Y93_09480 4351abc1b0e1e8db9b8ff1ff62bd164d 687 PIRSF PIRSF015589 1 687 2.4E-267 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 C3Y93_09480 4351abc1b0e1e8db9b8ff1ff62bd164d 687 SUPERFAMILY SSF56024 502 682 4.93E-67 T 14-10-2018 C3Y93_09480 4351abc1b0e1e8db9b8ff1ff62bd164d 687 SUPERFAMILY SSF56024 316 499 3.92E-56 T 14-10-2018 C3Y93_09480 4351abc1b0e1e8db9b8ff1ff62bd164d 687 Gene3D G3DSA:3.30.1840.10 3 314 8.0E-100 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 C3Y93_09480 4351abc1b0e1e8db9b8ff1ff62bd164d 687 Gene3D G3DSA:3.30.870.10 319 501 4.9E-70 T 14-10-2018 C3Y93_09480 4351abc1b0e1e8db9b8ff1ff62bd164d 687 Pfam PF13089 Polyphosphate kinase N-terminal domain 11 117 5.9E-32 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 C3Y93_09480 4351abc1b0e1e8db9b8ff1ff62bd164d 687 Pfam PF13090 Polyphosphate kinase C-terminal domain 332 679 2.7E-150 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 SUPERFAMILY SSF48557 3 461 2.36E-161 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 Gene3D G3DSA:1.20.200.10 138 405 1.8E-118 T 14-10-2018 C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 Gene3D G3DSA:1.10.275.10 4 137 4.8E-59 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 Gene3D G3DSA:1.10.40.30 406 464 1.6E-27 T 14-10-2018 C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 1.1E-34 T 14-10-2018 IPR000362 Fumarate lyase family C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 1.1E-34 T 14-10-2018 IPR000362 Fumarate lyase family C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.1E-34 T 14-10-2018 IPR000362 Fumarate lyase family C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 1.1E-34 T 14-10-2018 IPR000362 Fumarate lyase family C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 90.937 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 Pfam PF00206 Lyase 11 341 1.7E-115 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 5.2E-5 T 14-10-2018 C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 PRINTS PR00145 Argininosuccinate lyase family signature 316 332 5.2E-5 T 14-10-2018 C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 460 1.6E-231 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3Y93_02580 2a40aeafb07f19a841cfd95348753437 464 Pfam PF10415 Fumarase C C-terminus 407 459 1.0E-25 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3Y93_02100 da0b85173bc9899720cca675d16de939 106 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 106 4.3E-37 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 C3Y93_02100 da0b85173bc9899720cca675d16de939 106 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 2 106 1.8E-52 T 14-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 C3Y93_02100 da0b85173bc9899720cca675d16de939 106 Gene3D G3DSA:2.60.300.12 1 106 1.4E-37 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C3Y93_02100 da0b85173bc9899720cca675d16de939 106 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 102 5.8E-23 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 C3Y93_02100 da0b85173bc9899720cca675d16de939 106 SUPERFAMILY SSF89360 1 95 8.11E-33 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C3Y93_02100 da0b85173bc9899720cca675d16de939 106 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 87 104 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 C3Y93_08450 33d7c302d0135fc70b2392b592c1ec1c 225 SMART SM00474 29 200 6.3E-9 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 C3Y93_08450 33d7c302d0135fc70b2392b592c1ec1c 225 SUPERFAMILY SSF53098 10 195 5.69E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_08450 33d7c302d0135fc70b2392b592c1ec1c 225 Pfam PF01612 3'-5' exonuclease 32 196 1.5E-19 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 C3Y93_08450 33d7c302d0135fc70b2392b592c1ec1c 225 Gene3D G3DSA:3.30.420.10 16 199 2.4E-36 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_10635 578c751981719b6aecd6b0fe1b7004ce 385 Gene3D G3DSA:3.10.350.10 57 102 3.1E-13 T 14-10-2018 IPR036779 LysM domain superfamily C3Y93_10635 578c751981719b6aecd6b0fe1b7004ce 385 SUPERFAMILY SSF54106 57 104 5.1E-7 T 14-10-2018 C3Y93_10635 578c751981719b6aecd6b0fe1b7004ce 385 Pfam PF01476 LysM domain 58 102 3.0E-14 T 14-10-2018 IPR018392 LysM domain C3Y93_04450 e447c99c746bfa1f6d06eaabe2c04e46 259 Pfam PF00970 Oxidoreductase FAD-binding domain 15 98 3.3E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 C3Y93_04450 e447c99c746bfa1f6d06eaabe2c04e46 259 Pfam PF00175 Oxidoreductase NAD-binding domain 112 230 3.9E-6 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C3Y93_04450 e447c99c746bfa1f6d06eaabe2c04e46 259 Gene3D G3DSA:3.40.50.80 100 255 4.9E-38 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_04450 e447c99c746bfa1f6d06eaabe2c04e46 259 Gene3D G3DSA:2.40.30.10 1 96 4.4E-29 T 14-10-2018 C3Y93_04450 e447c99c746bfa1f6d06eaabe2c04e46 259 SUPERFAMILY SSF63380 7 99 1.18E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3Y93_04450 e447c99c746bfa1f6d06eaabe2c04e46 259 SUPERFAMILY SSF52343 102 257 3.14E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_06240 fc9f397cab431b803ede72b5c93c3500 150 Pfam PF00692 dUTPase 15 148 3.2E-39 T 14-10-2018 IPR029054 dUTPase-like C3Y93_06240 fc9f397cab431b803ede72b5c93c3500 150 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 149 33.336 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 C3Y93_06240 fc9f397cab431b803ede72b5c93c3500 150 SUPERFAMILY SSF51283 3 149 1.23E-53 T 14-10-2018 IPR036157 dUTPase-like superfamily C3Y93_06240 fc9f397cab431b803ede72b5c93c3500 150 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 149 7.7E-49 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 C3Y93_06240 fc9f397cab431b803ede72b5c93c3500 150 Gene3D G3DSA:2.70.40.10 1 150 8.0E-55 T 14-10-2018 IPR036157 dUTPase-like superfamily C3Y93_06985 03b27a134881bc3156d082400bff0ec4 487 Pfam PF13091 PLD-like domain 317 450 6.1E-25 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C3Y93_06985 03b27a134881bc3156d082400bff0ec4 487 Pfam PF13091 PLD-like domain 82 258 2.9E-6 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C3Y93_06985 03b27a134881bc3156d082400bff0ec4 487 SUPERFAMILY SSF56024 304 460 1.5E-19 T 14-10-2018 C3Y93_06985 03b27a134881bc3156d082400bff0ec4 487 SUPERFAMILY SSF56024 74 266 6.59E-18 T 14-10-2018 C3Y93_06985 03b27a134881bc3156d082400bff0ec4 487 Gene3D G3DSA:3.30.870.10 305 459 3.6E-28 T 14-10-2018 C3Y93_00180 e018ce240a900fed6d70060278152702 201 Pfam PF06821 Serine hydrolase 4 178 9.6E-54 T 14-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 C3Y93_00180 e018ce240a900fed6d70060278152702 201 SUPERFAMILY SSF53474 4 179 1.91E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_00180 e018ce240a900fed6d70060278152702 201 Gene3D G3DSA:3.40.50.1820 2 184 3.3E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_06635 1692a375c22d7a5dd8e199f750161627 506 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 11 306 2.0E-98 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 C3Y93_06635 1692a375c22d7a5dd8e199f750161627 506 Gene3D G3DSA:3.30.420.150 115 295 2.0E-89 T 14-10-2018 C3Y93_06635 1692a375c22d7a5dd8e199f750161627 506 SUPERFAMILY SSF53067 11 131 2.04E-34 T 14-10-2018 C3Y93_06635 1692a375c22d7a5dd8e199f750161627 506 SUPERFAMILY SSF53067 135 311 2.1E-47 T 14-10-2018 C3Y93_06635 1692a375c22d7a5dd8e199f750161627 506 Gene3D G3DSA:3.30.420.40 12 303 2.0E-89 T 14-10-2018 C3Y93_06635 1692a375c22d7a5dd8e199f750161627 506 Pfam PF01966 HD domain 335 419 4.0E-5 T 14-10-2018 IPR006674 HD domain C3Y93_06635 1692a375c22d7a5dd8e199f750161627 506 SUPERFAMILY SSF109604 313 500 9.03E-46 T 14-10-2018 C3Y93_06635 1692a375c22d7a5dd8e199f750161627 506 Gene3D G3DSA:1.10.3210.10 310 505 1.3E-55 T 14-10-2018 C3Y93_06635 1692a375c22d7a5dd8e199f750161627 506 PIRSF PIRSF001267 1 502 4.4E-196 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 C3Y93_06635 1692a375c22d7a5dd8e199f750161627 506 Pfam PF02541 Ppx/GppA phosphatase family 25 308 1.0E-82 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 C3Y93_01300 964904fb24d0d934e36a8c7ade909ef8 427 Pfam PF01593 Flavin containing amine oxidoreductase 10 270 3.0E-17 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 C3Y93_01300 964904fb24d0d934e36a8c7ade909ef8 427 Gene3D G3DSA:3.50.50.60 3 406 8.3E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_01300 964904fb24d0d934e36a8c7ade909ef8 427 Gene3D G3DSA:3.30.70.1990 281 369 8.3E-31 T 14-10-2018 C3Y93_01300 964904fb24d0d934e36a8c7ade909ef8 427 SUPERFAMILY SSF51905 1 419 4.21E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_01300 964904fb24d0d934e36a8c7ade909ef8 427 Gene3D G3DSA:1.10.405.20 75 199 8.3E-31 T 14-10-2018 C3Y93_04050 23bf178d659cea55729b75cd4cb83cda 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 60 2.3E-17 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA C3Y93_00615 98147fb973581be715553e607866f405 439 SUPERFAMILY SSF52540 3 438 5.52E-169 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00615 98147fb973581be715553e607866f405 439 Gene3D G3DSA:1.10.300.10 102 202 6.8E-98 T 14-10-2018 C3Y93_00615 98147fb973581be715553e607866f405 439 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 439 204.897 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C3Y93_00615 98147fb973581be715553e607866f405 439 SMART SM00788 4 432 1.9E-281 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C3Y93_00615 98147fb973581be715553e607866f405 439 Pfam PF00709 Adenylosuccinate synthetase 5 431 6.6E-170 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C3Y93_00615 98147fb973581be715553e607866f405 439 Gene3D G3DSA:3.40.440.10 6 250 6.8E-98 T 14-10-2018 C3Y93_00615 98147fb973581be715553e607866f405 439 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 437 4.2E-171 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C3Y93_00615 98147fb973581be715553e607866f405 439 Gene3D G3DSA:3.90.170.10 268 439 4.9E-63 T 14-10-2018 C3Y93_00615 98147fb973581be715553e607866f405 439 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C3Y93_00615 98147fb973581be715553e607866f405 439 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C3Y93_12855 98ba8649ef93f2dd0e970e36fffcaf69 61 SUPERFAMILY SSF57829 2 54 1.22E-17 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 C3Y93_12855 98ba8649ef93f2dd0e970e36fffcaf69 61 Pfam PF01783 Ribosomal L32p protein family 2 55 2.7E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_12855 98ba8649ef93f2dd0e970e36fffcaf69 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.561 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_12855 98ba8649ef93f2dd0e970e36fffcaf69 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 53 5.0E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_08830 00ddda19ae5c1ea740cfddf383dbf57f 363 Gene3D G3DSA:3.40.50.720 171 305 8.1E-134 T 14-10-2018 C3Y93_08830 00ddda19ae5c1ea740cfddf383dbf57f 363 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 152 1.1E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C3Y93_08830 00ddda19ae5c1ea740cfddf383dbf57f 363 Pfam PF00107 Zinc-binding dehydrogenase 194 313 9.4E-29 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C3Y93_08830 00ddda19ae5c1ea740cfddf383dbf57f 363 SUPERFAMILY SSF51735 157 327 6.88E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_08830 00ddda19ae5c1ea740cfddf383dbf57f 363 Gene3D G3DSA:3.90.180.10 8 356 8.1E-134 T 14-10-2018 C3Y93_08830 00ddda19ae5c1ea740cfddf383dbf57f 363 SMART SM00829 11 360 3.2E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C3Y93_08830 00ddda19ae5c1ea740cfddf383dbf57f 363 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 C3Y93_08830 00ddda19ae5c1ea740cfddf383dbf57f 363 SUPERFAMILY SSF50129 1 190 3.69E-57 T 14-10-2018 IPR011032 GroES-like superfamily C3Y93_00725 86abb7a7bd42ae2135911633df561bf0 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.5E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_00725 86abb7a7bd42ae2135911633df561bf0 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.5E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_00725 86abb7a7bd42ae2135911633df561bf0 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 1.5E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_00725 86abb7a7bd42ae2135911633df561bf0 208 SUPERFAMILY SSF48498 87 178 2.0E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C3Y93_00725 86abb7a7bd42ae2135911633df561bf0 208 SUPERFAMILY SSF46689 8 90 5.49E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_00725 86abb7a7bd42ae2135911633df561bf0 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 63 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site C3Y93_00725 86abb7a7bd42ae2135911633df561bf0 208 Gene3D G3DSA:1.10.357.10 10 198 4.9E-36 T 14-10-2018 C3Y93_06335 6312c4d225d899c8a9720c874727d851 502 Pfam PF12787 EcsC protein family 61 319 1.7E-19 T 14-10-2018 IPR024787 EcsC protein C3Y93_06335 6312c4d225d899c8a9720c874727d851 502 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 95 240 2.0E-4 T 14-10-2018 C3Y93_02105 f5027419b2320202e11cba5e2d134a7e 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.2E-68 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 C3Y93_02105 f5027419b2320202e11cba5e2d134a7e 128 Gene3D G3DSA:3.90.1010.10 1 128 2.3E-57 T 14-10-2018 C3Y93_02105 f5027419b2320202e11cba5e2d134a7e 128 SUPERFAMILY SSF82649 1 125 8.63E-48 T 14-10-2018 C3Y93_02105 f5027419b2320202e11cba5e2d134a7e 128 Pfam PF01592 NifU-like N terminal domain 2 127 1.2E-56 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 C3Y93_09575 d25f640b6d62131345ddff2120fa9522 229 Gene3D G3DSA:1.10.287.460 27 86 2.2E-11 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 C3Y93_09575 d25f640b6d62131345ddff2120fa9522 229 SUPERFAMILY SSF54534 29 228 2.75E-58 T 14-10-2018 C3Y93_09575 d25f640b6d62131345ddff2120fa9522 229 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 137 225 2.5E-27 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain C3Y93_09575 d25f640b6d62131345ddff2120fa9522 229 Gene3D G3DSA:3.10.50.40 89 229 4.1E-52 T 14-10-2018 C3Y93_09575 d25f640b6d62131345ddff2120fa9522 229 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 25 130 5.6E-26 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 C3Y93_02430 dae62a02712d1a7b150f69734ac16e2d 391 Pfam PF13776 Domain of unknown function (DUF4172) 4 83 2.0E-20 T 14-10-2018 IPR025230 Domain of unknown function DUF4172 C3Y93_02430 dae62a02712d1a7b150f69734ac16e2d 391 Gene3D G3DSA:1.10.3290.10 30 298 1.0E-43 T 14-10-2018 IPR036597 Fido-like domain superfamily C3Y93_02430 dae62a02712d1a7b150f69734ac16e2d 391 SUPERFAMILY SSF140931 98 301 3.66E-37 T 14-10-2018 IPR036597 Fido-like domain superfamily C3Y93_02430 dae62a02712d1a7b150f69734ac16e2d 391 Pfam PF02661 Fic/DOC family 112 231 2.8E-18 T 14-10-2018 IPR003812 Fido domain C3Y93_07990 00c4538ca337f892f08798dbddfebd9a 125 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 120 18.724 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 C3Y93_07990 00c4538ca337f892f08798dbddfebd9a 125 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 115 5.8E-25 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 C3Y93_07990 00c4538ca337f892f08798dbddfebd9a 125 TIGRFAM TIGR00494 crcB: protein CrcB 4 116 7.9E-28 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 C3Y93_02570 a9a57a4cdabfcbddcbc72605d61622a6 127 SUPERFAMILY SSF47598 90 120 4.89E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C3Y93_02570 a9a57a4cdabfcbddcbc72605d61622a6 127 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 122 2.2E-41 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system C3Y93_02570 a9a57a4cdabfcbddcbc72605d61622a6 127 SUPERFAMILY SSF143100 1 63 1.7E-14 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like C3Y93_02570 a9a57a4cdabfcbddcbc72605d61622a6 127 Gene3D G3DSA:3.30.160.250 1 81 7.7E-20 T 14-10-2018 C3Y93_00210 7eb46e8806405ad68c774218e76e123c 709 Gene3D G3DSA:3.40.50.720 247 457 4.9E-13 T 14-10-2018 C3Y93_00210 7eb46e8806405ad68c774218e76e123c 709 Gene3D G3DSA:1.10.150.240 23 89 5.8E-47 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 C3Y93_00210 7eb46e8806405ad68c774218e76e123c 709 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 52 192 3.7E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3Y93_00210 7eb46e8806405ad68c774218e76e123c 709 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 509 622 5.2E-10 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 C3Y93_00210 7eb46e8806405ad68c774218e76e123c 709 Gene3D G3DSA:3.40.50.1000 13 193 5.8E-47 T 14-10-2018 IPR023214 HAD superfamily C3Y93_00210 7eb46e8806405ad68c774218e76e123c 709 SUPERFAMILY SSF48179 515 689 8.5E-14 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3Y93_00210 7eb46e8806405ad68c774218e76e123c 709 SUPERFAMILY SSF51735 250 423 2.7E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_00210 7eb46e8806405ad68c774218e76e123c 709 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 8.1E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3Y93_00210 7eb46e8806405ad68c774218e76e123c 709 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 8.1E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3Y93_00210 7eb46e8806405ad68c774218e76e123c 709 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 8.1E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3Y93_00210 7eb46e8806405ad68c774218e76e123c 709 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 8.1E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3Y93_00210 7eb46e8806405ad68c774218e76e123c 709 Gene3D G3DSA:1.10.1040.10 522 694 9.5E-25 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 C3Y93_00210 7eb46e8806405ad68c774218e76e123c 709 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 4.2E-32 T 14-10-2018 C3Y93_00210 7eb46e8806405ad68c774218e76e123c 709 SUPERFAMILY SSF56784 11 228 2.34E-43 T 14-10-2018 IPR036412 HAD-like superfamily C3Y93_07480 5150a7308905fbb520f496ce6634b5d4 565 SUPERFAMILY SSF89000 388 437 9.81E-16 T 14-10-2018 C3Y93_07480 5150a7308905fbb520f496ce6634b5d4 565 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 6 550 3.1E-231 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3Y93_07480 5150a7308905fbb520f496ce6634b5d4 565 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 549 4.1E-23 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3Y93_07480 5150a7308905fbb520f496ce6634b5d4 565 Pfam PF00682 HMGL-like 33 313 2.4E-77 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 C3Y93_07480 5150a7308905fbb520f496ce6634b5d4 565 SMART SM00917 422 550 5.5E-26 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3Y93_07480 5150a7308905fbb520f496ce6634b5d4 565 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 40 56 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3Y93_07480 5150a7308905fbb520f496ce6634b5d4 565 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 243 256 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3Y93_07480 5150a7308905fbb520f496ce6634b5d4 565 SUPERFAMILY SSF110921 449 549 7.72E-29 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3Y93_07480 5150a7308905fbb520f496ce6634b5d4 565 Gene3D G3DSA:3.20.20.70 10 376 3.7E-153 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_07480 5150a7308905fbb520f496ce6634b5d4 565 SUPERFAMILY SSF51569 22 330 1.28E-98 T 14-10-2018 C3Y93_07480 5150a7308905fbb520f496ce6634b5d4 565 Gene3D G3DSA:3.30.160.270 377 549 1.5E-53 T 14-10-2018 C3Y93_07480 5150a7308905fbb520f496ce6634b5d4 565 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 7 551 52.373 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C3Y93_01715 3ef0fbbc5eca7687f5d3104b7467f64f 207 SUPERFAMILY SSF54523 40 197 1.52E-23 T 14-10-2018 C3Y93_01715 3ef0fbbc5eca7687f5d3104b7467f64f 207 Gene3D G3DSA:3.10.610.10 36 141 8.2E-9 T 14-10-2018 C3Y93_01715 3ef0fbbc5eca7687f5d3104b7467f64f 207 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 1.6E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_01715 3ef0fbbc5eca7687f5d3104b7467f64f 207 SUPERFAMILY SSF54523 7 48 2.82E-5 T 14-10-2018 C3Y93_01715 3ef0fbbc5eca7687f5d3104b7467f64f 207 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_01715 3ef0fbbc5eca7687f5d3104b7467f64f 207 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 8.0E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_01715 3ef0fbbc5eca7687f5d3104b7467f64f 207 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 5 187 4.6E-22 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 C3Y93_01715 3ef0fbbc5eca7687f5d3104b7467f64f 207 Pfam PF11612 Type II secretion system (T2SS), protein J 59 193 1.2E-17 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 C3Y93_02485 89e7cf99bda0d1fa34d684be37f3d330 152 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 29 151 1.4E-12 T 14-10-2018 IPR019223 Domain of unknown function DUF2147 C3Y93_02485 89e7cf99bda0d1fa34d684be37f3d330 152 Gene3D G3DSA:2.40.128.520 27 152 2.0E-8 T 14-10-2018 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 Gene3D G3DSA:1.10.8.60 356 437 2.1E-31 T 14-10-2018 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 Gene3D G3DSA:3.40.50.300 438 650 1.3E-79 T 14-10-2018 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 SUPERFAMILY SSF52540 436 727 4.36E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 Gene3D G3DSA:1.10.8.60 652 755 8.2E-29 T 14-10-2018 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 644 5.0E-47 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.0E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.0E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.0E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.0E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 SUPERFAMILY SSF52540 169 421 2.75E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 734 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 SMART SM01086 652 744 1.1E-27 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 4.3E-14 T 14-10-2018 IPR004176 Clp, N-terminal C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 SMART SM00382 486 653 1.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 SMART SM00382 206 352 3.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 Gene3D G3DSA:1.10.1780.10 1 143 3.3E-37 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 Gene3D G3DSA:3.40.50.300 168 355 4.8E-64 T 14-10-2018 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 306 9.8E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 732 6.3E-24 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C3Y93_03185 8cdff094f0135c0a4ca1f8f4797e65df 758 SUPERFAMILY SSF81923 1 141 2.35E-48 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 C3Y93_06905 3bdb9f0d822750d366d5afaf35103528 611 SUPERFAMILY SSF56935 38 610 1.57E-104 T 14-10-2018 C3Y93_06905 3bdb9f0d822750d366d5afaf35103528 611 Gene3D G3DSA:2.170.130.10 37 162 2.0E-32 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3Y93_06905 3bdb9f0d822750d366d5afaf35103528 611 Pfam PF00593 TonB dependent receptor 229 610 2.0E-40 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3Y93_06905 3bdb9f0d822750d366d5afaf35103528 611 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 157 2.5E-23 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3Y93_06905 3bdb9f0d822750d366d5afaf35103528 611 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 45 - T 14-10-2018 IPR010916 TonB box, conserved site C3Y93_06905 3bdb9f0d822750d366d5afaf35103528 611 Gene3D G3DSA:2.40.170.20 165 609 4.0E-73 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C3Y93_01350 0af7fa94ce701f50c00777cda735413a 403 SUPERFAMILY SSF53686 10 397 1.15E-146 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3Y93_01350 0af7fa94ce701f50c00777cda735413a 403 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_01350 0af7fa94ce701f50c00777cda735413a 403 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 398 51.773 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_01350 0af7fa94ce701f50c00777cda735413a 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 385 5.3E-47 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3Y93_01350 0af7fa94ce701f50c00777cda735413a 403 PIRSF PIRSF001413 3 403 8.5E-167 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_01350 0af7fa94ce701f50c00777cda735413a 403 Gene3D G3DSA:3.40.50.1100 17 213 6.2E-186 T 14-10-2018 C3Y93_01350 0af7fa94ce701f50c00777cda735413a 403 Gene3D G3DSA:3.40.50.1100 61 391 6.2E-186 T 14-10-2018 C3Y93_01350 0af7fa94ce701f50c00777cda735413a 403 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 397 4.2E-189 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_01945 374c9c3ab65a913f7e9f15f2e84c4b21 262 Gene3D G3DSA:2.160.10.10 1 194 1.7E-62 T 14-10-2018 C3Y93_01945 374c9c3ab65a913f7e9f15f2e84c4b21 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 7 261 1.4E-97 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 C3Y93_01945 374c9c3ab65a913f7e9f15f2e84c4b21 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 51 2.8E-10 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_01945 374c9c3ab65a913f7e9f15f2e84c4b21 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 142 1.4E-6 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_01945 374c9c3ab65a913f7e9f15f2e84c4b21 262 SUPERFAMILY SSF51161 2 262 4.0E-80 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3Y93_01945 374c9c3ab65a913f7e9f15f2e84c4b21 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 152 180 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 C3Y93_01945 374c9c3ab65a913f7e9f15f2e84c4b21 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 4 262 43.008 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 C3Y93_01945 374c9c3ab65a913f7e9f15f2e84c4b21 262 Gene3D G3DSA:1.20.1180.10 196 262 6.3E-24 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 C3Y93_01945 374c9c3ab65a913f7e9f15f2e84c4b21 262 PIRSF PIRSF000456 4 262 9.2E-104 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 C3Y93_01945 374c9c3ab65a913f7e9f15f2e84c4b21 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 179 261 1.8E-24 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 C3Y93_01945 374c9c3ab65a913f7e9f15f2e84c4b21 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 19 47 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 2.1E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 151 168 2.1E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 2.1E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 304 318 2.1E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 280 285 2.1E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 239 248 2.1E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 164 3.0E-41 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 152 163 1.0E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 1.0E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 276 285 1.0E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 288 311 1.0E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 21 323 4.4E-93 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 Gene3D G3DSA:3.40.50.1370 152 310 2.0E-91 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 Gene3D G3DSA:3.40.50.1370 21 321 2.0E-91 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 173 321 6.3E-29 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 66 73 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 20 325 40.454 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_00665 000fe925e3b979ec2c8192ab6ddcc6a1 338 SUPERFAMILY SSF53671 19 324 7.33E-94 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C3Y93_01805 6d5f5ba3f721aeedc8c804b708404069 257 Pfam PF01695 IstB-like ATP binding protein 56 234 5.0E-61 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 C3Y93_01805 6d5f5ba3f721aeedc8c804b708404069 257 SMART SM00382 100 237 9.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_01805 6d5f5ba3f721aeedc8c804b708404069 257 Gene3D G3DSA:3.40.50.300 64 250 6.4E-47 T 14-10-2018 C3Y93_01805 6d5f5ba3f721aeedc8c804b708404069 257 SUPERFAMILY SSF52540 68 241 9.71E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01805 6d5f5ba3f721aeedc8c804b708404069 257 PIRSF PIRSF003073 1 254 2.7E-77 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein C3Y93_01205 6d5f5ba3f721aeedc8c804b708404069 257 Pfam PF01695 IstB-like ATP binding protein 56 234 5.0E-61 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 C3Y93_01205 6d5f5ba3f721aeedc8c804b708404069 257 SMART SM00382 100 237 9.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_01205 6d5f5ba3f721aeedc8c804b708404069 257 Gene3D G3DSA:3.40.50.300 64 250 6.4E-47 T 14-10-2018 C3Y93_01205 6d5f5ba3f721aeedc8c804b708404069 257 SUPERFAMILY SSF52540 68 241 9.71E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01205 6d5f5ba3f721aeedc8c804b708404069 257 PIRSF PIRSF003073 1 254 2.7E-77 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein C3Y93_11435 c4061c28069859f2a63bbed0fb933845 500 SUPERFAMILY SSF52540 9 482 4.1E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11435 c4061c28069859f2a63bbed0fb933845 500 Pfam PF13245 AAA domain 13 252 7.5E-13 T 14-10-2018 C3Y93_11435 c4061c28069859f2a63bbed0fb933845 500 Pfam PF13361 UvrD-like helicase C-terminal domain 425 477 1.1E-10 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C3Y93_11435 c4061c28069859f2a63bbed0fb933845 500 Gene3D G3DSA:3.40.50.300 272 488 9.8E-13 T 14-10-2018 C3Y93_09560 ed91b662def673241747cb8000c4cc6e 187 Gene3D G3DSA:1.10.340.30 3 187 3.1E-73 T 14-10-2018 C3Y93_09560 ed91b662def673241747cb8000c4cc6e 187 Pfam PF03352 Methyladenine glycosylase 8 183 4.2E-68 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 C3Y93_09560 ed91b662def673241747cb8000c4cc6e 187 SUPERFAMILY SSF48150 4 184 7.53E-71 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 C3Y93_09560 ed91b662def673241747cb8000c4cc6e 187 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 4 182 1.6E-73 T 14-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 C3Y93_10595 be926827e196a3c9fba41ff84eddb5ca 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 19.417 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10595 be926827e196a3c9fba41ff84eddb5ca 139 SUPERFAMILY SSF51344 3 85 2.88E-25 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10595 be926827e196a3c9fba41ff84eddb5ca 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 2.8E-29 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10595 be926827e196a3c9fba41ff84eddb5ca 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 1.3E-39 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10595 be926827e196a3c9fba41ff84eddb5ca 139 SUPERFAMILY SSF46604 87 135 1.86E-10 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10595 be926827e196a3c9fba41ff84eddb5ca 139 Gene3D G3DSA:1.20.5.440 90 132 1.7E-7 T 14-10-2018 C3Y93_10595 be926827e196a3c9fba41ff84eddb5ca 139 Gene3D G3DSA:2.60.15.10 2 89 2.6E-29 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10595 be926827e196a3c9fba41ff84eddb5ca 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 17 89 4.0E-31 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_08120 d6d9b54be6f45bdec4c52fd7c47b24f2 1414 SUPERFAMILY SSF50998 1066 1332 2.83E-6 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily C3Y93_08120 d6d9b54be6f45bdec4c52fd7c47b24f2 1414 Pfam PF05567 Neisseria PilC beta-propeller domain 884 1163 2.1E-14 T 14-10-2018 IPR008707 PilC beta-propeller domain C3Y93_05725 0140bd5133db2cea4f1ebead96d118b1 377 SUPERFAMILY SSF111369 67 248 1.83E-19 T 14-10-2018 C3Y93_05725 0140bd5133db2cea4f1ebead96d118b1 377 Gene3D G3DSA:2.40.30.170 62 298 1.9E-50 T 14-10-2018 C3Y93_05725 0140bd5133db2cea4f1ebead96d118b1 377 Gene3D G3DSA:2.40.420.20 56 356 1.9E-50 T 14-10-2018 C3Y93_05725 0140bd5133db2cea4f1ebead96d118b1 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 55 355 3.8E-52 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3Y93_05725 0140bd5133db2cea4f1ebead96d118b1 377 Gene3D G3DSA:2.40.50.100 77 223 1.9E-50 T 14-10-2018 C3Y93_05725 0140bd5133db2cea4f1ebead96d118b1 377 Gene3D G3DSA:1.10.287.470 111 184 1.9E-50 T 14-10-2018 C3Y93_05725 0140bd5133db2cea4f1ebead96d118b1 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 77 272 5.3E-19 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3Y93_12580 76e904e5c5edb86f3cfe7b6534c7366f 336 SMART SM00342 248 330 3.7E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_12580 76e904e5c5edb86f3cfe7b6534c7366f 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 1.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 C3Y93_12580 76e904e5c5edb86f3cfe7b6534c7366f 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 1.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 C3Y93_12580 76e904e5c5edb86f3cfe7b6534c7366f 336 SUPERFAMILY SSF46689 283 331 2.96E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_12580 76e904e5c5edb86f3cfe7b6534c7366f 336 Gene3D G3DSA:1.10.10.60 227 334 1.4E-25 T 14-10-2018 C3Y93_12580 76e904e5c5edb86f3cfe7b6534c7366f 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 204 8.2E-49 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal C3Y93_12580 76e904e5c5edb86f3cfe7b6534c7366f 336 Pfam PF12833 Helix-turn-helix domain 255 331 2.2E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_09335 21c81f424056775a57982d21e29f3d06 233 Pfam PF13091 PLD-like domain 15 130 2.2E-7 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C3Y93_09335 21c81f424056775a57982d21e29f3d06 233 SUPERFAMILY SSF56024 13 138 2.79E-9 T 14-10-2018 C3Y93_09335 21c81f424056775a57982d21e29f3d06 233 Gene3D G3DSA:3.30.870.10 4 147 9.0E-9 T 14-10-2018 C3Y93_07800 79bde6c8e55b060ce936b568ef205b97 245 Pfam PF00117 Glutamine amidotransferase class-I 49 192 5.3E-16 T 14-10-2018 IPR017926 Glutamine amidotransferase C3Y93_07800 79bde6c8e55b060ce936b568ef205b97 245 Gene3D G3DSA:3.40.50.880 5 242 2.6E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_07800 79bde6c8e55b060ce936b568ef205b97 245 SUPERFAMILY SSF52317 49 211 1.58E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_06185 5ba2441dc2fe79d3b1f22433123ff045 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 5.2E-155 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 C3Y93_06185 5ba2441dc2fe79d3b1f22433123ff045 345 Gene3D G3DSA:3.30.450.90 1 100 3.6E-36 T 14-10-2018 C3Y93_06185 5ba2441dc2fe79d3b1f22433123ff045 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C3Y93_06185 5ba2441dc2fe79d3b1f22433123ff045 345 SUPERFAMILY SSF52540 5 335 2.23E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_06185 5ba2441dc2fe79d3b1f22433123ff045 345 SMART SM00382 122 247 0.0018 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_06185 5ba2441dc2fe79d3b1f22433123ff045 345 Pfam PF00437 Type II/IV secretion system protein 11 270 3.4E-47 T 14-10-2018 IPR001482 Type II/IV secretion system protein C3Y93_06185 5ba2441dc2fe79d3b1f22433123ff045 345 Gene3D G3DSA:3.40.50.300 101 345 1.5E-106 T 14-10-2018 C3Y93_00320 2027f80fea30410e09b9ef98d32ad7c7 485 SUPERFAMILY SSF55347 292 455 2.41E-55 T 14-10-2018 C3Y93_00320 2027f80fea30410e09b9ef98d32ad7c7 485 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 297 454 4.0E-48 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00320 2027f80fea30410e09b9ef98d32ad7c7 485 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 133 466 3.0E-113 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00320 2027f80fea30410e09b9ef98d32ad7c7 485 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 132 242 5.0E-22 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00320 2027f80fea30410e09b9ef98d32ad7c7 485 Gene3D G3DSA:3.30.360.10 291 456 3.2E-116 T 14-10-2018 C3Y93_00320 2027f80fea30410e09b9ef98d32ad7c7 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 313 329 8.8E-20 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00320 2027f80fea30410e09b9ef98d32ad7c7 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 286 304 8.8E-20 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00320 2027f80fea30410e09b9ef98d32ad7c7 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 369 386 8.8E-20 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00320 2027f80fea30410e09b9ef98d32ad7c7 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 250 263 8.8E-20 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00320 2027f80fea30410e09b9ef98d32ad7c7 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 410 425 8.8E-20 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00320 2027f80fea30410e09b9ef98d32ad7c7 485 SMART SM00846 131 292 2.3E-54 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00320 2027f80fea30410e09b9ef98d32ad7c7 485 SUPERFAMILY SSF51735 132 308 1.89E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_00320 2027f80fea30410e09b9ef98d32ad7c7 485 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 290 297 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_00320 2027f80fea30410e09b9ef98d32ad7c7 485 Gene3D G3DSA:3.40.50.720 133 467 3.2E-116 T 14-10-2018 C3Y93_12355 7fb27619da4ffa8b4e1f3862697a8143 346 Pfam PF05036 Sporulation related domain 264 337 2.9E-15 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 C3Y93_12355 7fb27619da4ffa8b4e1f3862697a8143 346 Gene3D G3DSA:3.30.70.1070 266 330 4.9E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C3Y93_12355 7fb27619da4ffa8b4e1f3862697a8143 346 SUPERFAMILY SSF110997 263 336 1.28E-13 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C3Y93_03790 495f201e25debd775921638f97a471f9 792 Gene3D G3DSA:3.50.30.10 357 476 2.8E-42 T 14-10-2018 C3Y93_03790 495f201e25debd775921638f97a471f9 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 C3Y93_03790 495f201e25debd775921638f97a471f9 792 Gene3D G3DSA:3.30.1490.20 2 192 1.4E-70 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3Y93_03790 495f201e25debd775921638f97a471f9 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 343 1.1E-117 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 C3Y93_03790 495f201e25debd775921638f97a471f9 792 Gene3D G3DSA:3.20.20.60 477 787 1.1E-103 T 14-10-2018 C3Y93_03790 495f201e25debd775921638f97a471f9 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 C3Y93_03790 495f201e25debd775921638f97a471f9 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 382 454 3.8E-26 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 C3Y93_03790 495f201e25debd775921638f97a471f9 792 Gene3D G3DSA:3.30.470.20 193 356 8.5E-58 T 14-10-2018 C3Y93_03790 495f201e25debd775921638f97a471f9 792 SUPERFAMILY SSF51621 460 787 1.26E-100 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C3Y93_03790 495f201e25debd775921638f97a471f9 792 PIRSF PIRSF000854 2 792 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 C3Y93_03790 495f201e25debd775921638f97a471f9 792 SUPERFAMILY SSF56059 4 383 1.15E-104 T 14-10-2018 C3Y93_03790 495f201e25debd775921638f97a471f9 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 1.9E-5 T 14-10-2018 C3Y93_03790 495f201e25debd775921638f97a471f9 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 1.9E-5 T 14-10-2018 C3Y93_03790 495f201e25debd775921638f97a471f9 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 1.9E-5 T 14-10-2018 C3Y93_03790 495f201e25debd775921638f97a471f9 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 480 780 1.8E-63 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 C3Y93_03790 495f201e25debd775921638f97a471f9 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 785 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 C3Y93_03790 495f201e25debd775921638f97a471f9 792 SUPERFAMILY SSF52009 347 466 1.96E-35 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 C3Y93_05995 6f661bd6eae4a8ca4b6866541699bf81 188 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 182 8.0E-52 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3Y93_05995 6f661bd6eae4a8ca4b6866541699bf81 188 Hamap MF_00528 Septum formation protein Maf [maf]. 3 188 30.817 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3Y93_05995 6f661bd6eae4a8ca4b6866541699bf81 188 PIRSF PIRSF006305 1 188 5.0E-53 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3Y93_05995 6f661bd6eae4a8ca4b6866541699bf81 188 Gene3D G3DSA:3.90.950.10 1 186 1.3E-69 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C3Y93_05995 6f661bd6eae4a8ca4b6866541699bf81 188 SUPERFAMILY SSF52972 2 182 3.47E-61 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C3Y93_05995 6f661bd6eae4a8ca4b6866541699bf81 188 Pfam PF02545 Maf-like protein 3 183 7.7E-57 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3Y93_02665 87c983d73c1c456d8e474aecb670e305 462 SUPERFAMILY SSF55961 171 452 6.28E-69 T 14-10-2018 C3Y93_02665 87c983d73c1c456d8e474aecb670e305 462 Gene3D G3DSA:2.102.10.10 52 179 5.1E-114 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3Y93_02665 87c983d73c1c456d8e474aecb670e305 462 SUPERFAMILY SSF50022 14 171 7.59E-45 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3Y93_02665 87c983d73c1c456d8e474aecb670e305 462 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 202 442 4.6E-19 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 C3Y93_02665 87c983d73c1c456d8e474aecb670e305 462 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 95 118 - T 14-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 C3Y93_02665 87c983d73c1c456d8e474aecb670e305 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 88 108 3.5E-49 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_02665 87c983d73c1c456d8e474aecb670e305 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 109 129 3.5E-49 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_02665 87c983d73c1c456d8e474aecb670e305 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 155 181 3.5E-49 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_02665 87c983d73c1c456d8e474aecb670e305 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 37 62 3.5E-49 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_02665 87c983d73c1c456d8e474aecb670e305 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 67 82 3.5E-49 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_02665 87c983d73c1c456d8e474aecb670e305 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 196 218 3.5E-49 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_02665 87c983d73c1c456d8e474aecb670e305 462 TIGRFAM TIGR03229 benzo_1_2_benA: benzoate 1,2-dioxygenase, large subunit 15 446 1.8E-270 T 14-10-2018 IPR017639 Benzoate 1,2-dioxygenase, large subunit C3Y93_02665 87c983d73c1c456d8e474aecb670e305 462 Pfam PF00355 Rieske [2Fe-2S] domain 52 136 2.7E-22 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 C3Y93_02665 87c983d73c1c456d8e474aecb670e305 462 Gene3D G3DSA:3.90.380.10 30 443 5.1E-114 T 14-10-2018 C3Y93_10000 d4ab1895b9d5e7da4021b0921dcdd156 95 Gene3D G3DSA:1.20.59.10 1 95 5.9E-28 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C3Y93_10000 d4ab1895b9d5e7da4021b0921dcdd156 95 Pfam PF01817 Chorismate mutase type II 13 89 1.2E-15 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C3Y93_10000 d4ab1895b9d5e7da4021b0921dcdd156 95 SUPERFAMILY SSF48600 2 91 7.48E-20 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C3Y93_10000 d4ab1895b9d5e7da4021b0921dcdd156 95 SMART SM00830 13 92 4.7E-14 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 435 660 1.7E-68 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 Pfam PF00364 Biotin-requiring enzyme 233 303 7.4E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 Pfam PF00364 Biotin-requiring enzyme 2 72 4.3E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 Pfam PF00364 Biotin-requiring enzyme 119 188 8.7E-15 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 Gene3D G3DSA:2.40.50.100 118 194 1.4E-15 T 14-10-2018 C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 SUPERFAMILY SSF52777 424 661 2.09E-72 T 14-10-2018 C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 SUPERFAMILY SSF51230 2 88 6.67E-21 T 14-10-2018 IPR011053 Single hybrid motif C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 254 283 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 Gene3D G3DSA:3.30.559.10 418 661 2.0E-78 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 SUPERFAMILY SSF47005 356 401 7.46E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 23 52 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 140 169 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 SUPERFAMILY SSF51230 118 205 2.62E-18 T 14-10-2018 IPR011053 Single hybrid motif C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 Gene3D G3DSA:4.10.320.10 362 405 5.6E-15 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 SUPERFAMILY SSF51230 231 317 1.96E-20 T 14-10-2018 IPR011053 Single hybrid motif C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 Pfam PF02817 e3 binding domain 362 396 3.1E-11 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 Gene3D G3DSA:2.40.50.100 1 77 5.2E-19 T 14-10-2018 C3Y93_09185 bbe8d21baa9d87ff5a10f77087830681 661 Gene3D G3DSA:2.40.50.100 231 308 2.1E-18 T 14-10-2018 C3Y93_00865 98166e02aecd1923dee1ee91db7f8424 324 SUPERFAMILY SSF52283 1 133 3.97E-27 T 14-10-2018 C3Y93_00865 98166e02aecd1923dee1ee91db7f8424 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 286 9.6E-58 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 C3Y93_00865 98166e02aecd1923dee1ee91db7f8424 324 Gene3D G3DSA:3.40.50.720 4 313 3.5E-105 T 14-10-2018 C3Y93_00865 98166e02aecd1923dee1ee91db7f8424 324 Gene3D G3DSA:3.40.50.720 97 286 3.5E-105 T 14-10-2018 C3Y93_00865 98166e02aecd1923dee1ee91db7f8424 324 SUPERFAMILY SSF51735 100 287 7.13E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_00865 98166e02aecd1923dee1ee91db7f8424 324 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 176 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 C3Y93_00865 98166e02aecd1923dee1ee91db7f8424 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 318 2.5E-26 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 C3Y93_08310 b33ce9c9131019e0437904cc71a4891c 469 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 42 465 3.5E-122 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_08310 b33ce9c9131019e0437904cc71a4891c 469 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 14 466 30.441 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_08310 b33ce9c9131019e0437904cc71a4891c 469 SUPERFAMILY SSF53244 325 465 1.88E-25 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3Y93_08310 b33ce9c9131019e0437904cc71a4891c 469 Pfam PF01225 Mur ligase family, catalytic domain 36 84 4.9E-7 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 C3Y93_08310 b33ce9c9131019e0437904cc71a4891c 469 SUPERFAMILY SSF63418 14 109 6.67E-22 T 14-10-2018 IPR035911 MurE/MurF, N-terminal C3Y93_08310 b33ce9c9131019e0437904cc71a4891c 469 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 395 6.7E-12 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C3Y93_08310 b33ce9c9131019e0437904cc71a4891c 469 SUPERFAMILY SSF53623 114 323 3.27E-53 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3Y93_08310 b33ce9c9131019e0437904cc71a4891c 469 Gene3D G3DSA:3.40.1390.10 1 93 6.4E-35 T 14-10-2018 C3Y93_08310 b33ce9c9131019e0437904cc71a4891c 469 Gene3D G3DSA:3.90.190.20 323 469 1.5E-40 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3Y93_08310 b33ce9c9131019e0437904cc71a4891c 469 Pfam PF08245 Mur ligase middle domain 120 302 4.8E-42 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C3Y93_08310 b33ce9c9131019e0437904cc71a4891c 469 Gene3D G3DSA:3.40.1190.10 94 322 2.7E-84 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3Y93_06820 9f67f0e319f165a6a2c95a6549fd0db3 269 Pfam PF13432 Tetratricopeptide repeat 45 87 2.0E-4 T 14-10-2018 C3Y93_06820 9f67f0e319f165a6a2c95a6549fd0db3 269 Gene3D G3DSA:1.25.40.10 36 260 3.6E-42 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_06820 9f67f0e319f165a6a2c95a6549fd0db3 269 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 14 249 4.5E-68 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW C3Y93_06820 9f67f0e319f165a6a2c95a6549fd0db3 269 SUPERFAMILY SSF81901 45 208 1.8E-19 T 14-10-2018 C3Y93_06820 9f67f0e319f165a6a2c95a6549fd0db3 269 Pfam PF13181 Tetratricopeptide repeat 148 179 7.1E-7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3Y93_06820 9f67f0e319f165a6a2c95a6549fd0db3 269 Pfam PF13431 Tetratricopeptide repeat 99 132 1.8E-5 T 14-10-2018 C3Y93_06820 9f67f0e319f165a6a2c95a6549fd0db3 269 SMART SM00028 40 73 0.087 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3Y93_06820 9f67f0e319f165a6a2c95a6549fd0db3 269 SMART SM00028 147 180 1.4E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3Y93_06820 9f67f0e319f165a6a2c95a6549fd0db3 269 SMART SM00028 74 110 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3Y93_11425 1ee899bb9ea90218188718c586815da1 945 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 81 101 1.5E-5 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C3Y93_11425 1ee899bb9ea90218188718c586815da1 945 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 260 282 1.5E-5 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C3Y93_11425 1ee899bb9ea90218188718c586815da1 945 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 111 3.0E-8 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_11425 1ee899bb9ea90218188718c586815da1 945 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 3.5E-37 T 14-10-2018 C3Y93_11425 1ee899bb9ea90218188718c586815da1 945 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 3.5E-37 T 14-10-2018 C3Y93_11425 1ee899bb9ea90218188718c586815da1 945 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 268 3.5E-37 T 14-10-2018 C3Y93_11425 1ee899bb9ea90218188718c586815da1 945 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 310 322 3.5E-37 T 14-10-2018 C3Y93_11425 1ee899bb9ea90218188718c586815da1 945 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 3.5E-37 T 14-10-2018 C3Y93_11425 1ee899bb9ea90218188718c586815da1 945 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 3.5E-37 T 14-10-2018 C3Y93_11425 1ee899bb9ea90218188718c586815da1 945 Pfam PF00361 Proton-conducting membrane transporter 130 416 2.8E-66 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_11425 1ee899bb9ea90218188718c586815da1 945 Pfam PF13244 Domain of unknown function (DUF4040) 622 685 1.1E-16 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 C3Y93_11425 1ee899bb9ea90218188718c586815da1 945 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 798 924 6.5E-36 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein C3Y93_00205 8a2676ea0f21fcd2e270683f30e66253 136 Gene3D G3DSA:3.10.129.10 2 135 5.7E-49 T 14-10-2018 C3Y93_00205 8a2676ea0f21fcd2e270683f30e66253 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 131 3.3E-10 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 C3Y93_00205 8a2676ea0f21fcd2e270683f30e66253 136 Pfam PF03061 Thioesterase superfamily 45 118 3.8E-11 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 C3Y93_00205 8a2676ea0f21fcd2e270683f30e66253 136 SUPERFAMILY SSF54637 18 134 5.69E-23 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_04035 9437203f65adeeb96a9fb36e7c1ef744 522 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 298 304 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3Y93_04035 9437203f65adeeb96a9fb36e7c1ef744 522 Pfam PF02384 N-6 DNA Methylase 177 479 9.3E-111 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 C3Y93_04035 9437203f65adeeb96a9fb36e7c1ef744 522 Gene3D G3DSA:1.20.1260.30 1 194 7.2E-57 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily C3Y93_04035 9437203f65adeeb96a9fb36e7c1ef744 522 Gene3D G3DSA:3.40.50.150 198 474 1.6E-88 T 14-10-2018 C3Y93_04035 9437203f65adeeb96a9fb36e7c1ef744 522 Pfam PF12161 HsdM N-terminal domain 9 164 1.5E-18 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain C3Y93_04035 9437203f65adeeb96a9fb36e7c1ef744 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 295 307 2.0E-23 T 14-10-2018 C3Y93_04035 9437203f65adeeb96a9fb36e7c1ef744 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 331 355 2.0E-23 T 14-10-2018 C3Y93_04035 9437203f65adeeb96a9fb36e7c1ef744 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 200 216 2.0E-23 T 14-10-2018 C3Y93_04035 9437203f65adeeb96a9fb36e7c1ef744 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 226 240 2.0E-23 T 14-10-2018 C3Y93_04035 9437203f65adeeb96a9fb36e7c1ef744 522 SUPERFAMILY SSF53335 7 514 3.26E-132 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_04035 9437203f65adeeb96a9fb36e7c1ef744 522 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 7 493 1.0E-136 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 C3Y93_02585 a988b09844bd7cbbc9c0af0c9ee6b018 334 SUPERFAMILY SSF51735 2 330 6.18E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_02585 a988b09844bd7cbbc9c0af0c9ee6b018 334 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 260 4.2E-40 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 C3Y93_02585 a988b09844bd7cbbc9c0af0c9ee6b018 334 Gene3D G3DSA:3.90.25.10 193 328 6.7E-89 T 14-10-2018 C3Y93_02585 a988b09844bd7cbbc9c0af0c9ee6b018 334 Gene3D G3DSA:3.40.50.720 2 272 6.7E-89 T 14-10-2018 C3Y93_11765 dd5ecce3e33719252a73707c823fa939 298 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 298 147.039 T 14-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 C3Y93_11765 dd5ecce3e33719252a73707c823fa939 298 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 292 8.7E-144 T 14-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 C3Y93_11765 dd5ecce3e33719252a73707c823fa939 298 SUPERFAMILY SSF55347 131 269 8.5E-61 T 14-10-2018 C3Y93_11765 dd5ecce3e33719252a73707c823fa939 298 Gene3D G3DSA:3.30.360.10 131 274 1.3E-124 T 14-10-2018 C3Y93_11765 dd5ecce3e33719252a73707c823fa939 298 Gene3D G3DSA:3.40.50.720 7 286 1.3E-124 T 14-10-2018 C3Y93_11765 dd5ecce3e33719252a73707c823fa939 298 SUPERFAMILY SSF51735 1 155 4.51E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_11765 dd5ecce3e33719252a73707c823fa939 298 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 131 268 2.1E-65 T 14-10-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 C3Y93_11765 dd5ecce3e33719252a73707c823fa939 298 PIRSF PIRSF015689 1 298 1.3E-133 T 14-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 C3Y93_11765 dd5ecce3e33719252a73707c823fa939 298 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 8.8E-10 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 C3Y93_11765 dd5ecce3e33719252a73707c823fa939 298 SMART SM00859 5 120 7.8E-5 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 C3Y93_00730 a4463c6802e8b0e3ca96c42f148ace01 562 Gene3D G3DSA:3.30.300.30 452 558 4.1E-29 T 14-10-2018 C3Y93_00730 a4463c6802e8b0e3ca96c42f148ace01 562 SUPERFAMILY SSF56801 16 554 4.45E-156 T 14-10-2018 C3Y93_00730 a4463c6802e8b0e3ca96c42f148ace01 562 Gene3D G3DSA:3.40.50.12780 9 448 7.3E-124 T 14-10-2018 C3Y93_00730 a4463c6802e8b0e3ca96c42f148ace01 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 208 219 - T 14-10-2018 IPR020845 AMP-binding, conserved site C3Y93_00730 a4463c6802e8b0e3ca96c42f148ace01 562 Pfam PF00501 AMP-binding enzyme 26 458 9.6E-111 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3Y93_00730 a4463c6802e8b0e3ca96c42f148ace01 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 467 542 3.1E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C3Y93_08070 12561375646a103fd3d28ae5f8aaa1f6 301 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 14 220 5.9E-73 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_08070 12561375646a103fd3d28ae5f8aaa1f6 301 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 247 299 7.9E-8 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_08070 12561375646a103fd3d28ae5f8aaa1f6 301 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 184 235 3.2E-7 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 C3Y93_08070 12561375646a103fd3d28ae5f8aaa1f6 301 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 13 299 18.288 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_08070 12561375646a103fd3d28ae5f8aaa1f6 301 SUPERFAMILY SSF55120 13 244 5.76E-76 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_08070 12561375646a103fd3d28ae5f8aaa1f6 301 Gene3D G3DSA:3.30.2350.10 4 249 1.4E-86 T 14-10-2018 C3Y93_08070 12561375646a103fd3d28ae5f8aaa1f6 301 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 35 183 6.3E-59 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 C3Y93_00040 646761902b36096a81462d19c33cc444 258 Pfam PF00588 SpoU rRNA Methylase family 117 250 8.6E-31 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 C3Y93_00040 646761902b36096a81462d19c33cc444 258 SUPERFAMILY SSF55315 5 104 8.24E-17 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like C3Y93_00040 646761902b36096a81462d19c33cc444 258 Gene3D G3DSA:3.30.1330.30 5 105 1.6E-10 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like C3Y93_00040 646761902b36096a81462d19c33cc444 258 Gene3D G3DSA:3.40.1280.10 112 258 1.5E-45 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3Y93_00040 646761902b36096a81462d19c33cc444 258 SUPERFAMILY SSF75217 113 258 2.49E-36 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3Y93_05060 7d3cf9f64782f7ae3c1dcc3dc75649f2 326 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 321 9.6E-117 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 C3Y93_05060 7d3cf9f64782f7ae3c1dcc3dc75649f2 326 Gene3D G3DSA:3.30.930.10 1 326 6.7E-92 T 14-10-2018 C3Y93_05060 7d3cf9f64782f7ae3c1dcc3dc75649f2 326 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 323 1.2E-38 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_05060 7d3cf9f64782f7ae3c1dcc3dc75649f2 326 SUPERFAMILY SSF55681 14 323 2.99E-64 T 14-10-2018 C3Y93_05060 7d3cf9f64782f7ae3c1dcc3dc75649f2 326 PRINTS PR00982 Lysyl-tRNA synthetase signature 208 224 5.7E-12 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3Y93_05060 7d3cf9f64782f7ae3c1dcc3dc75649f2 326 PRINTS PR00982 Lysyl-tRNA synthetase signature 79 92 5.7E-12 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3Y93_05060 7d3cf9f64782f7ae3c1dcc3dc75649f2 326 PRINTS PR00982 Lysyl-tRNA synthetase signature 97 114 5.7E-12 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3Y93_05060 7d3cf9f64782f7ae3c1dcc3dc75649f2 326 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 5.7E-12 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3Y93_03760 adb1db1830dc6e4ee55039eeae705665 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 C3Y93_03760 adb1db1830dc6e4ee55039eeae705665 362 Pfam PF03462 PCRF domain 13 203 9.4E-73 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 C3Y93_03760 adb1db1830dc6e4ee55039eeae705665 362 Gene3D G3DSA:3.30.70.1660 112 342 6.6E-96 T 14-10-2018 C3Y93_03760 adb1db1830dc6e4ee55039eeae705665 362 Gene3D G3DSA:3.30.160.20 210 297 6.6E-96 T 14-10-2018 C3Y93_03760 adb1db1830dc6e4ee55039eeae705665 362 SUPERFAMILY SSF75620 12 353 2.35E-135 T 14-10-2018 C3Y93_03760 adb1db1830dc6e4ee55039eeae705665 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 1.0E-163 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 C3Y93_03760 adb1db1830dc6e4ee55039eeae705665 362 Pfam PF00472 RF-1 domain 213 321 7.0E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 C3Y93_03760 adb1db1830dc6e4ee55039eeae705665 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.431 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 C3Y93_03760 adb1db1830dc6e4ee55039eeae705665 362 SMART SM00937 63 178 1.5E-66 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 C3Y93_11800 18aee151d612a0b10584234a93698c00 172 Pfam PF00866 Ring hydroxylating beta subunit 18 163 3.9E-47 T 14-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 C3Y93_11800 18aee151d612a0b10584234a93698c00 172 Gene3D G3DSA:3.10.450.50 1 172 2.4E-59 T 14-10-2018 C3Y93_11800 18aee151d612a0b10584234a93698c00 172 SUPERFAMILY SSF54427 5 172 1.51E-44 T 14-10-2018 IPR032710 NTF2-like domain superfamily C3Y93_10215 21ea06ef9bd65bda21b27307a59aade4 317 SUPERFAMILY SSF53448 1 213 2.87E-55 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_10215 21ea06ef9bd65bda21b27307a59aade4 317 Gene3D G3DSA:3.90.550.10 1 256 7.6E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_10215 21ea06ef9bd65bda21b27307a59aade4 317 Pfam PF00535 Glycosyl transferase family 2 3 129 4.1E-33 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C3Y93_01550 434d1c8d52a41120858658ea3ae41196 390 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 267 287 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 C3Y93_01550 434d1c8d52a41120858658ea3ae41196 390 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 180 208 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 C3Y93_01550 434d1c8d52a41120858658ea3ae41196 390 SUPERFAMILY SSF56796 13 389 2.62E-137 T 14-10-2018 C3Y93_01550 434d1c8d52a41120858658ea3ae41196 390 Gene3D G3DSA:1.20.1090.10 193 390 1.3E-79 T 14-10-2018 C3Y93_01550 434d1c8d52a41120858658ea3ae41196 390 Pfam PF00465 Iron-containing alcohol dehydrogenase 20 382 3.9E-129 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 C3Y93_01550 434d1c8d52a41120858658ea3ae41196 390 Gene3D G3DSA:3.40.50.1970 8 191 1.0E-54 T 14-10-2018 C3Y93_07300 274bb58dd7be00f54911ed0a09701fd1 396 Gene3D G3DSA:1.20.1250.20 7 384 9.8E-34 T 14-10-2018 C3Y93_07300 274bb58dd7be00f54911ed0a09701fd1 396 SUPERFAMILY SSF103473 7 390 9.16E-45 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_07300 274bb58dd7be00f54911ed0a09701fd1 396 Pfam PF07690 Major Facilitator Superfamily 20 330 1.0E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_01690 ca147e424470ff80fd0c807a8afc89b0 113 Gene3D G3DSA:2.40.10.220 2 113 1.8E-32 T 14-10-2018 C3Y93_01690 ca147e424470ff80fd0c807a8afc89b0 113 Pfam PF07238 PilZ domain 17 83 7.6E-7 T 14-10-2018 IPR009875 PilZ domain GO:0035438 C3Y93_05435 41d649d7a09e0f044fee70debf89519c 160 SUPERFAMILY SSF75217 1 156 7.33E-51 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3Y93_05435 41d649d7a09e0f044fee70debf89519c 160 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 158 28.029 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 C3Y93_05435 41d649d7a09e0f044fee70debf89519c 160 PIRSF PIRSF004505 1 158 9.4E-51 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 C3Y93_05435 41d649d7a09e0f044fee70debf89519c 160 Gene3D G3DSA:3.40.1280.10 1 158 1.7E-52 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3Y93_05435 41d649d7a09e0f044fee70debf89519c 160 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 158 1.4E-52 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 C3Y93_05435 41d649d7a09e0f044fee70debf89519c 160 Pfam PF02590 Predicted SPOUT methyltransferase 1 157 5.7E-51 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 Gene3D G3DSA:2.40.50.140 1 107 3.2E-33 T 14-10-2018 C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 8.5E-27 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 8.5E-27 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 8.5E-27 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 8.5E-27 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 SUPERFAMILY SSF50249 2 106 1.85E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 SUPERFAMILY SSF55681 113 586 2.95E-104 T 14-10-2018 C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 585 33.299 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 Gene3D G3DSA:3.30.930.10 120 582 1.5E-196 T 14-10-2018 C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 Gene3D G3DSA:3.30.1360.30 275 423 1.5E-196 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 6.5E-241 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 7.2E-109 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 SUPERFAMILY SSF55261 293 422 4.09E-43 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 Pfam PF01336 OB-fold nucleic acid binding domain 19 103 5.3E-17 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 C3Y93_07000 e2d72246a956f073e1d81ed0219a5682 594 Pfam PF02938 GAD domain 311 409 2.3E-28 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 C3Y93_00635 e408d715d447575bed922a1b14131177 234 Pfam PF00027 Cyclic nucleotide-binding domain 33 120 2.6E-21 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3Y93_00635 e408d715d447575bed922a1b14131177 234 SUPERFAMILY SSF51206 20 147 4.58E-30 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like C3Y93_00635 e408d715d447575bed922a1b14131177 234 SMART SM00419 170 218 1.4E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3Y93_00635 e408d715d447575bed922a1b14131177 234 Gene3D G3DSA:1.10.10.10 149 217 4.4E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_00635 e408d715d447575bed922a1b14131177 234 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 7.1E-9 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3Y93_00635 e408d715d447575bed922a1b14131177 234 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 7.1E-9 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3Y93_00635 e408d715d447575bed922a1b14131177 234 Pfam PF00325 Bacterial regulatory proteins, crp family 176 207 1.3E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C3Y93_00635 e408d715d447575bed922a1b14131177 234 SMART SM00100 9 132 1.3E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C3Y93_00635 e408d715d447575bed922a1b14131177 234 SUPERFAMILY SSF46785 149 218 6.75E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_00635 e408d715d447575bed922a1b14131177 234 ProSitePatterns PS00042 Crp-type HTH domain signature. 178 201 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 C3Y93_00635 e408d715d447575bed922a1b14131177 234 Gene3D G3DSA:2.60.120.10 21 148 8.4E-41 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3Y93_00635 e408d715d447575bed922a1b14131177 234 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 81 99 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site C3Y93_06760 758715d5e3c9997ff3708195988ac893 269 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 265 39.453 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 C3Y93_06760 758715d5e3c9997ff3708195988ac893 269 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 7 266 1.7E-95 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 C3Y93_06760 758715d5e3c9997ff3708195988ac893 269 Gene3D G3DSA:3.20.20.60 1 269 1.9E-97 T 14-10-2018 C3Y93_06760 758715d5e3c9997ff3708195988ac893 269 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 260 1.5E-99 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 C3Y93_06760 758715d5e3c9997ff3708195988ac893 269 PIRSF PIRSF000388 1 268 1.7E-91 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 C3Y93_06760 758715d5e3c9997ff3708195988ac893 269 SUPERFAMILY SSF51621 2 265 1.12E-93 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C3Y93_05120 4a43a00c2cd8515d9ec72443bded1a46 677 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 331 9.0E-78 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 C3Y93_05120 4a43a00c2cd8515d9ec72443bded1a46 677 SUPERFAMILY SSF51971 335 519 4.36E-41 T 14-10-2018 C3Y93_05120 4a43a00c2cd8515d9ec72443bded1a46 677 Gene3D G3DSA:3.20.20.70 4 370 8.3E-123 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_05120 4a43a00c2cd8515d9ec72443bded1a46 677 SUPERFAMILY SSF51905 472 631 9.72E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_05120 4a43a00c2cd8515d9ec72443bded1a46 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 398 1.5E-13 T 14-10-2018 C3Y93_05120 4a43a00c2cd8515d9ec72443bded1a46 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 461 479 1.5E-13 T 14-10-2018 C3Y93_05120 4a43a00c2cd8515d9ec72443bded1a46 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 500 518 1.5E-13 T 14-10-2018 C3Y93_05120 4a43a00c2cd8515d9ec72443bded1a46 677 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 622 638 1.5E-13 T 14-10-2018 C3Y93_05120 4a43a00c2cd8515d9ec72443bded1a46 677 Gene3D G3DSA:3.40.50.720 377 670 1.8E-107 T 14-10-2018 C3Y93_05120 4a43a00c2cd8515d9ec72443bded1a46 677 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 639 4.3E-24 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3Y93_05120 4a43a00c2cd8515d9ec72443bded1a46 677 SUPERFAMILY SSF51395 3 364 2.15E-109 T 14-10-2018 C3Y93_05120 4a43a00c2cd8515d9ec72443bded1a46 677 Gene3D G3DSA:3.50.50.60 473 629 1.8E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_13615 43d1418a0e432c92ce278a8036147f98 211 Gene3D G3DSA:3.40.50.12740 10 209 4.4E-18 T 14-10-2018 C3Y93_13615 43d1418a0e432c92ce278a8036147f98 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 200 6.0E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_13615 43d1418a0e432c92ce278a8036147f98 211 SUPERFAMILY SSF46894 150 200 3.74E-7 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3Y93_13615 43d1418a0e432c92ce278a8036147f98 211 SUPERFAMILY SSF52172 10 130 5.27E-8 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_05845 0efe7846c73d614bd50868b478698f38 293 SUPERFAMILY SSF53850 93 290 1.19E-43 T 14-10-2018 C3Y93_05845 0efe7846c73d614bd50868b478698f38 293 Gene3D G3DSA:3.40.190.290 92 293 1.1E-40 T 14-10-2018 C3Y93_05845 0efe7846c73d614bd50868b478698f38 293 Pfam PF03466 LysR substrate binding domain 92 291 2.3E-48 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_05845 0efe7846c73d614bd50868b478698f38 293 SUPERFAMILY SSF46785 1 111 1.63E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_05845 0efe7846c73d614bd50868b478698f38 293 Gene3D G3DSA:1.10.10.10 1 86 5.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_05845 0efe7846c73d614bd50868b478698f38 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 9.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_05845 0efe7846c73d614bd50868b478698f38 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_05845 0efe7846c73d614bd50868b478698f38 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_05845 0efe7846c73d614bd50868b478698f38 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_04150 3262ae55e5de0f145dc1d4b2b1a3ef7d 188 Gene3D G3DSA:2.60.450.10 34 181 9.6E-44 T 14-10-2018 C3Y93_04150 3262ae55e5de0f145dc1d4b2b1a3ef7d 188 Pfam PF03968 OstA-like protein 44 153 1.1E-25 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal C3Y93_04150 3262ae55e5de0f145dc1d4b2b1a3ef7d 188 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 34 177 2.8E-40 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 C3Y93_04150 3262ae55e5de0f145dc1d4b2b1a3ef7d 188 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 13 178 24.254 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 C3Y93_09910 b34f49111b82c9032cc16e83abe4fc4e 357 SUPERFAMILY SSF53474 72 337 1.09E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_09910 b34f49111b82c9032cc16e83abe4fc4e 357 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 195 207 - T 14-10-2018 IPR033140 Lipase, GDXG, putative serine active site C3Y93_09910 b34f49111b82c9032cc16e83abe4fc4e 357 Gene3D G3DSA:3.40.50.1820 44 351 2.8E-72 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_09910 b34f49111b82c9032cc16e83abe4fc4e 357 Pfam PF07859 alpha/beta hydrolase fold 123 328 7.8E-62 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 C3Y93_09955 016292ce390362854e7f62fa7c767990 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 C3Y93_09955 016292ce390362854e7f62fa7c767990 480 SUPERFAMILY SSF53720 6 479 1.24E-122 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3Y93_09955 016292ce390362854e7f62fa7c767990 480 Gene3D G3DSA:3.40.605.10 32 466 7.9E-140 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C3Y93_09955 016292ce390362854e7f62fa7c767990 480 Pfam PF00171 Aldehyde dehydrogenase family 25 472 6.7E-131 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3Y93_09955 016292ce390362854e7f62fa7c767990 480 Gene3D G3DSA:3.40.309.10 257 446 7.9E-140 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C3Y93_08105 104fd56853aaad2b4848c55204a6304d 85 SUPERFAMILY SSF54565 1 75 6.15E-28 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_08105 104fd56853aaad2b4848c55204a6304d 85 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.5E-28 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_08105 104fd56853aaad2b4848c55204a6304d 85 Pfam PF00886 Ribosomal protein S16 8 68 1.1E-24 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_08105 104fd56853aaad2b4848c55204a6304d 85 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.151 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_08105 104fd56853aaad2b4848c55204a6304d 85 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_08105 104fd56853aaad2b4848c55204a6304d 85 Gene3D G3DSA:3.30.1320.10 1 82 9.1E-31 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_00185 7011d962b7f0b2eba89291b8f9ea2c99 335 Pfam PF13531 Bacterial extracellular solute-binding protein 48 282 1.3E-44 T 14-10-2018 C3Y93_00185 7011d962b7f0b2eba89291b8f9ea2c99 335 Gene3D G3DSA:3.40.190.10 117 327 1.5E-132 T 14-10-2018 C3Y93_00185 7011d962b7f0b2eba89291b8f9ea2c99 335 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 148 156 - T 14-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 C3Y93_00185 7011d962b7f0b2eba89291b8f9ea2c99 335 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 16 328 9.3E-144 T 14-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 C3Y93_00185 7011d962b7f0b2eba89291b8f9ea2c99 335 SUPERFAMILY SSF53850 24 328 2.21E-86 T 14-10-2018 C3Y93_00185 7011d962b7f0b2eba89291b8f9ea2c99 335 Gene3D G3DSA:3.40.190.10 30 297 1.5E-132 T 14-10-2018 C3Y93_13000 828c36fc667ebabc3ee05c85c9f4d6c5 420 Gene3D G3DSA:2.40.50.100 70 214 2.3E-102 T 14-10-2018 C3Y93_13000 828c36fc667ebabc3ee05c85c9f4d6c5 420 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 380 4.0E-78 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3Y93_13000 828c36fc667ebabc3ee05c85c9f4d6c5 420 SUPERFAMILY SSF111369 59 305 2.22E-78 T 14-10-2018 C3Y93_13000 828c36fc667ebabc3ee05c85c9f4d6c5 420 Gene3D G3DSA:2.40.420.20 309 378 2.3E-102 T 14-10-2018 C3Y93_13000 828c36fc667ebabc3ee05c85c9f4d6c5 420 Gene3D G3DSA:2.40.30.170 57 308 2.3E-102 T 14-10-2018 C3Y93_13000 828c36fc667ebabc3ee05c85c9f4d6c5 420 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 298 3.5E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3Y93_13000 828c36fc667ebabc3ee05c85c9f4d6c5 420 Pfam PF00529 HlyD membrane-fusion protein of T1SS 299 365 5.4E-10 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3Y93_13000 828c36fc667ebabc3ee05c85c9f4d6c5 420 Gene3D G3DSA:1.10.287.470 105 178 2.3E-102 T 14-10-2018 C3Y93_10440 1aca7a86d3645d1b4b7499bbc97de7bd 566 Gene3D G3DSA:3.30.70.270 395 565 2.3E-43 T 14-10-2018 C3Y93_10440 1aca7a86d3645d1b4b7499bbc97de7bd 566 Pfam PF00990 Diguanylate cyclase, GGDEF domain 408 562 1.3E-36 T 14-10-2018 IPR000160 GGDEF domain C3Y93_10440 1aca7a86d3645d1b4b7499bbc97de7bd 566 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 405 565 3.3E-42 T 14-10-2018 IPR000160 GGDEF domain C3Y93_10440 1aca7a86d3645d1b4b7499bbc97de7bd 566 SUPERFAMILY SSF55073 413 564 3.84E-37 T 14-10-2018 IPR029787 Nucleotide cyclase C3Y93_10440 1aca7a86d3645d1b4b7499bbc97de7bd 566 SMART SM00267 397 565 4.2E-39 T 14-10-2018 IPR000160 GGDEF domain C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 SUPERFAMILY SSF53720 27 428 3.53E-88 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 PIRSF PIRSF000099 2 430 5.7E-160 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 428 41.341 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 Gene3D G3DSA:3.40.50.1980 234 350 7.8E-127 T 14-10-2018 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 1.1E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 1.1E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 1.1E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.1E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.1E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.1E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 1.1E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 1.1E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 4.0E-163 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 Pfam PF00815 Histidinol dehydrogenase 25 427 6.6E-171 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 C3Y93_06500 03a6451da22bbc663ec9af299ad0a64f 430 Gene3D G3DSA:3.40.50.1980 31 232 7.8E-127 T 14-10-2018 C3Y93_14120 49ccd1b89edc502494dacefad4103381 215 SUPERFAMILY SSF53041 20 153 6.28E-34 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 C3Y93_14120 49ccd1b89edc502494dacefad4103381 215 SUPERFAMILY SSF46689 159 203 7.17E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_14120 49ccd1b89edc502494dacefad4103381 215 Gene3D G3DSA:3.40.50.1390 19 144 3.1E-33 T 14-10-2018 C3Y93_14120 49ccd1b89edc502494dacefad4103381 215 SMART SM00857 19 157 1.8E-41 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C3Y93_14120 49ccd1b89edc502494dacefad4103381 215 Pfam PF00239 Resolvase, N terminal domain 20 154 1.3E-33 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C3Y93_14120 49ccd1b89edc502494dacefad4103381 215 ProSitePatterns PS00397 Site-specific recombinases active site. 22 30 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 C3Y93_05710 a4d9d775af711bc844f5c454b29ef777 122 Gene3D G3DSA:3.40.50.12740 1 122 1.4E-42 T 14-10-2018 C3Y93_05710 a4d9d775af711bc844f5c454b29ef777 122 SUPERFAMILY SSF52172 1 120 1.38E-38 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_05710 a4d9d775af711bc844f5c454b29ef777 122 Pfam PF00072 Response regulator receiver domain 4 115 3.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_05710 a4d9d775af711bc844f5c454b29ef777 122 SMART SM00448 2 115 1.4E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_04205 ac5eb583b83d13d6d1bb3ea9bcd44fce 72 Gene3D G3DSA:2.30.30.320 1 72 9.6E-28 T 14-10-2018 IPR037135 DUF1653-like domain superfamily C3Y93_04205 ac5eb583b83d13d6d1bb3ea9bcd44fce 72 Pfam PF07866 Protein of unknown function (DUF1653) 5 66 2.1E-28 T 14-10-2018 IPR023387 DUF1653-like domain C3Y93_07730 962787ba9c78c23964e9e420029851de 178 Pfam PF00281 Ribosomal protein L5 24 80 1.6E-27 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07730 962787ba9c78c23964e9e420029851de 178 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07730 962787ba9c78c23964e9e420029851de 178 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 178 42.373 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07730 962787ba9c78c23964e9e420029851de 178 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.7E-43 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07730 962787ba9c78c23964e9e420029851de 178 PIRSF PIRSF002161 1 178 5.5E-68 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07730 962787ba9c78c23964e9e420029851de 178 SUPERFAMILY SSF55282 3 178 2.07E-77 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07730 962787ba9c78c23964e9e420029851de 178 Gene3D G3DSA:3.30.1440.10 1 178 5.7E-79 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_09870 c8be33cdfc3419decb39d027b55c769f 170 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 12 165 3.0E-64 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 C3Y93_09870 c8be33cdfc3419decb39d027b55c769f 170 SUPERFAMILY SSF52255 11 166 7.06E-66 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 C3Y93_09870 c8be33cdfc3419decb39d027b55c769f 170 SMART SM01001 10 161 1.4E-102 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 C3Y93_09870 c8be33cdfc3419decb39d027b55c769f 170 Pfam PF00731 AIR carboxylase 12 159 6.0E-63 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 C3Y93_09870 c8be33cdfc3419decb39d027b55c769f 170 PIRSF PIRSF001338 7 167 5.9E-66 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 C3Y93_09870 c8be33cdfc3419decb39d027b55c769f 170 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 12 165 32.032 T 14-10-2018 IPR033747 Class I PurE C3Y93_09870 c8be33cdfc3419decb39d027b55c769f 170 Gene3D G3DSA:3.40.50.7700 1 169 1.9E-72 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 C3Y93_07675 d62d98601d5b7b74164ddb0d4040b590 128 SUPERFAMILY SSF53137 15 128 5.89E-47 T 14-10-2018 C3Y93_07675 d62d98601d5b7b74164ddb0d4040b590 128 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 9 125 3.1E-54 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07675 d62d98601d5b7b74164ddb0d4040b590 128 Pfam PF00411 Ribosomal protein S11 18 127 3.5E-50 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 C3Y93_07675 d62d98601d5b7b74164ddb0d4040b590 128 Gene3D G3DSA:3.30.420.80 1 128 5.2E-54 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 C3Y93_07675 d62d98601d5b7b74164ddb0d4040b590 128 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 128 32.395 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 C3Y93_07675 d62d98601d5b7b74164ddb0d4040b590 128 ProSitePatterns PS00054 Ribosomal protein S11 signature. 96 118 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site C3Y93_07675 d62d98601d5b7b74164ddb0d4040b590 128 PIRSF PIRSF002131 1 128 1.0E-51 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 C3Y93_12830 14d72f23cf4592fcb54ef0422ab989d3 197 SUPERFAMILY SSF46785 96 171 2.82E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_12830 14d72f23cf4592fcb54ef0422ab989d3 197 SUPERFAMILY SSF46785 17 93 5.3E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_12830 14d72f23cf4592fcb54ef0422ab989d3 197 Gene3D G3DSA:1.10.10.10 13 93 4.0E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_12830 14d72f23cf4592fcb54ef0422ab989d3 197 PIRSF PIRSF019345 4 195 1.1E-53 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 C3Y93_12830 14d72f23cf4592fcb54ef0422ab989d3 197 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 22 185 4.2E-33 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 C3Y93_12830 14d72f23cf4592fcb54ef0422ab989d3 197 Gene3D G3DSA:1.10.10.10 94 189 1.1E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_12830 14d72f23cf4592fcb54ef0422ab989d3 197 Pfam PF04079 Segregation and condensation complex subunit ScpB 22 180 3.8E-48 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 C3Y93_04165 da7c65e971607bdfa7ff4d25e4130647 325 SMART SM00116 210 258 0.12 T 14-10-2018 IPR000644 CBS domain C3Y93_04165 da7c65e971607bdfa7ff4d25e4130647 325 SMART SM00116 276 324 5.3E-6 T 14-10-2018 IPR000644 CBS domain C3Y93_04165 da7c65e971607bdfa7ff4d25e4130647 325 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 314 3.4E-105 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 C3Y93_04165 da7c65e971607bdfa7ff4d25e4130647 325 Gene3D G3DSA:3.10.580.10 196 322 3.5E-43 T 14-10-2018 C3Y93_04165 da7c65e971607bdfa7ff4d25e4130647 325 Pfam PF01380 SIS domain 40 172 4.3E-25 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 C3Y93_04165 da7c65e971607bdfa7ff4d25e4130647 325 Gene3D G3DSA:3.40.50.10490 6 195 1.1E-57 T 14-10-2018 C3Y93_04165 da7c65e971607bdfa7ff4d25e4130647 325 Pfam PF00571 CBS domain 201 258 4.7E-6 T 14-10-2018 IPR000644 CBS domain C3Y93_04165 da7c65e971607bdfa7ff4d25e4130647 325 Pfam PF00571 CBS domain 269 322 9.9E-12 T 14-10-2018 IPR000644 CBS domain C3Y93_04165 da7c65e971607bdfa7ff4d25e4130647 325 SUPERFAMILY SSF53697 10 322 1.8E-64 T 14-10-2018 C3Y93_04165 da7c65e971607bdfa7ff4d25e4130647 325 PIRSF PIRSF004692 1 325 2.3E-132 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 C3Y93_07805 abe87f86b7355511d09ce3ecc797d302 397 Gene3D G3DSA:3.90.1150.10 259 394 7.9E-27 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_07805 abe87f86b7355511d09ce3ecc797d302 397 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 392 3.4E-72 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3Y93_07805 abe87f86b7355511d09ce3ecc797d302 397 SUPERFAMILY SSF53383 24 392 2.36E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_07805 abe87f86b7355511d09ce3ecc797d302 397 Gene3D G3DSA:3.40.640.10 1 256 2.4E-51 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_07805 abe87f86b7355511d09ce3ecc797d302 397 PIRSF PIRSF001434 1 395 2.1E-98 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3Y93_12985 a459cc39fcb9c6ca9a392713ab83b7fc 118 Gene3D G3DSA:3.30.110.70 3 106 1.4E-31 T 14-10-2018 C3Y93_12985 a459cc39fcb9c6ca9a392713ab83b7fc 118 SUPERFAMILY SSF117782 1 104 2.49E-36 T 14-10-2018 IPR035439 UPF0145 domain superfamily C3Y93_12985 a459cc39fcb9c6ca9a392713ab83b7fc 118 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.211 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 C3Y93_12985 a459cc39fcb9c6ca9a392713ab83b7fc 118 Pfam PF01906 Putative heavy-metal-binding 1 103 4.5E-38 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 C3Y93_07205 26d6169e28eff7fb7e8a9fd048a5f823 376 Gene3D G3DSA:3.20.20.105 1 368 1.1E-171 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C3Y93_07205 26d6169e28eff7fb7e8a9fd048a5f823 376 SUPERFAMILY SSF51713 1 365 3.53E-163 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C3Y93_07205 26d6169e28eff7fb7e8a9fd048a5f823 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 365 57.096 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C3Y93_07205 26d6169e28eff7fb7e8a9fd048a5f823 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 368 2.5E-164 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C3Y93_07205 26d6169e28eff7fb7e8a9fd048a5f823 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 362 4.6E-93 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C3Y93_07205 26d6169e28eff7fb7e8a9fd048a5f823 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 369 1.1E-172 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C3Y93_03020 dc6a51c6067bf5910a87b20d2ce34ff1 66 Pfam PF01381 Helix-turn-helix 11 38 1.6E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_03020 dc6a51c6067bf5910a87b20d2ce34ff1 66 Gene3D G3DSA:1.10.260.40 12 58 3.2E-7 T 14-10-2018 C3Y93_03020 dc6a51c6067bf5910a87b20d2ce34ff1 66 SUPERFAMILY SSF47413 9 39 2.82E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_06085 3b3d5a40b4086f5c85c2a32ceeacf028 235 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_06085 3b3d5a40b4086f5c85c2a32ceeacf028 235 Pfam PF00005 ABC transporter 24 175 4.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_06085 3b3d5a40b4086f5c85c2a32ceeacf028 235 Gene3D G3DSA:3.40.50.300 5 233 4.2E-58 T 14-10-2018 C3Y93_06085 3b3d5a40b4086f5c85c2a32ceeacf028 235 SMART SM00382 33 230 4.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_06085 3b3d5a40b4086f5c85c2a32ceeacf028 235 SUPERFAMILY SSF52540 6 228 1.96E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_08600 ca8e8b0a9f9c397b0fc981c47651809f 373 TIGRFAM TIGR03233 DNA_S_dndB: DNA sulfur modification protein DndB 7 355 9.6E-138 T 14-10-2018 IPR017642 DNA sulphur modification protein DndB C3Y93_08600 ca8e8b0a9f9c397b0fc981c47651809f 373 TIGRFAM TIGR03187 DGQHR: DGQHR domain 10 284 2.3E-79 T 14-10-2018 IPR017601 DGQHR-containing domain C3Y93_08600 ca8e8b0a9f9c397b0fc981c47651809f 373 Pfam PF14072 DNA-sulfur modification-associated 9 342 8.4E-110 T 14-10-2018 IPR017642 DNA sulphur modification protein DndB C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 Gene3D G3DSA:3.50.40.10 198 393 1.1E-72 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 SMART SM00896 698 791 5.2E-39 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 2.7E-258 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 Gene3D G3DSA:3.30.56.10 7 179 2.7E-72 T 14-10-2018 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 SUPERFAMILY SSF55681 467 687 7.45E-47 T 14-10-2018 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 Gene3D G3DSA:3.30.930.10 487 688 1.1E-50 T 14-10-2018 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 SUPERFAMILY SSF56037 208 393 3.92E-69 T 14-10-2018 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 Gene3D G3DSA:3.30.56.10 402 476 2.2E-22 T 14-10-2018 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 SUPERFAMILY SSF46955 404 475 1.1E-17 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 Gene3D G3DSA:2.40.50.140 39 154 2.7E-72 T 14-10-2018 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 Pfam PF03483 B3/4 domain 211 384 1.8E-66 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 Gene3D G3DSA:3.30.70.380 699 792 5.0E-28 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 Pfam PF01588 Putative tRNA binding domain 45 145 3.0E-28 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 SUPERFAMILY SSF54991 694 791 1.15E-28 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 SUPERFAMILY SSF50249 39 196 1.86E-51 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 SMART SM00873 211 384 6.7E-90 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 Pfam PF03484 tRNA synthetase B5 domain 406 471 9.3E-17 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 SMART SM00874 402 471 5.5E-26 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 43.937 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 C3Y93_06660 1cf1adcd7eaa905818efb4a93688002d 793 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 6.6E-27 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 C3Y93_05365 6504f134208314f201279ff1e8744f84 125 Gene3D G3DSA:1.10.3830.10 8 125 1.7E-36 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 C3Y93_05365 6504f134208314f201279ff1e8744f84 125 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 75 86 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 C3Y93_05365 6504f134208314f201279ff1e8744f84 125 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 120 2.5E-32 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 C3Y93_12255 0f387a70a45ea4e5a605011d2355165f 162 SUPERFAMILY SSF89963 2 88 8.63E-28 T 14-10-2018 IPR036183 YajQ-like superfamily C3Y93_12255 0f387a70a45ea4e5a605011d2355165f 162 SUPERFAMILY SSF89963 90 162 8.37E-28 T 14-10-2018 IPR036183 YajQ-like superfamily C3Y93_12255 0f387a70a45ea4e5a605011d2355165f 162 Pfam PF04461 Protein of unknown function (DUF520) 2 161 4.4E-62 T 14-10-2018 IPR007551 Protein of unknown function DUF520 C3Y93_12255 0f387a70a45ea4e5a605011d2355165f 162 Gene3D G3DSA:3.30.70.860 96 162 9.6E-30 T 14-10-2018 IPR035571 UPF0234-like, C-terminal C3Y93_12255 0f387a70a45ea4e5a605011d2355165f 162 Gene3D G3DSA:3.30.70.990 9 95 6.0E-28 T 14-10-2018 IPR035570 UPF0234, N-terminal C3Y93_12255 0f387a70a45ea4e5a605011d2355165f 162 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 162 25.54 T 14-10-2018 IPR007551 Protein of unknown function DUF520 C3Y93_07310 45faffb37fdab0f33f1130065d6b8131 340 Gene3D G3DSA:1.20.120.1460 251 325 7.0E-19 T 14-10-2018 C3Y93_07310 45faffb37fdab0f33f1130065d6b8131 340 SUPERFAMILY SSF51395 10 308 2.56E-69 T 14-10-2018 C3Y93_07310 45faffb37fdab0f33f1130065d6b8131 340 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 93 111 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3Y93_07310 45faffb37fdab0f33f1130065d6b8131 340 Gene3D G3DSA:3.20.20.70 7 248 8.2E-72 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_07310 45faffb37fdab0f33f1130065d6b8131 340 PIRSF PIRSF006621 1 327 1.5E-75 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3Y93_07310 45faffb37fdab0f33f1130065d6b8131 340 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 11 314 8.5E-140 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 C3Y93_07310 45faffb37fdab0f33f1130065d6b8131 340 Pfam PF01207 Dihydrouridine synthase (Dus) 14 310 6.3E-87 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3Y93_07310 45faffb37fdab0f33f1130065d6b8131 340 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 6 328 49.498 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 C3Y93_03730 28eb0fd26c8abb967f428a2062967a61 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 2.6E-27 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3Y93_03730 28eb0fd26c8abb967f428a2062967a61 378 Gene3D G3DSA:2.40.110.10 119 231 6.5E-45 T 14-10-2018 C3Y93_03730 28eb0fd26c8abb967f428a2062967a61 378 Gene3D G3DSA:1.10.540.10 1 118 3.5E-41 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3Y93_03730 28eb0fd26c8abb967f428a2062967a61 378 Gene3D G3DSA:1.20.140.10 232 378 1.9E-57 T 14-10-2018 C3Y93_03730 28eb0fd26c8abb967f428a2062967a61 378 SUPERFAMILY SSF56645 2 239 5.1E-81 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3Y93_03730 28eb0fd26c8abb967f428a2062967a61 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 116 4.6E-33 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3Y93_03730 28eb0fd26c8abb967f428a2062967a61 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 6.2E-51 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3Y93_03730 28eb0fd26c8abb967f428a2062967a61 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 C3Y93_03730 28eb0fd26c8abb967f428a2062967a61 378 SUPERFAMILY SSF47203 225 377 4.35E-59 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3Y93_03730 28eb0fd26c8abb967f428a2062967a61 378 PIRSF PIRSF016578 3 105 5.9E-5 T 14-10-2018 C3Y93_03730 28eb0fd26c8abb967f428a2062967a61 378 PIRSF PIRSF016578 128 376 3.8E-15 T 14-10-2018 C3Y93_06305 2d381cc469f2bd1da3baac55978b4ed1 154 Gene3D G3DSA:3.40.630.30 1 148 2.4E-40 T 14-10-2018 C3Y93_06305 2d381cc469f2bd1da3baac55978b4ed1 154 Pfam PF00583 Acetyltransferase (GNAT) family 23 116 5.4E-15 T 14-10-2018 IPR000182 GNAT domain C3Y93_06305 2d381cc469f2bd1da3baac55978b4ed1 154 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 10 139 1.6E-35 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 C3Y93_06305 2d381cc469f2bd1da3baac55978b4ed1 154 SUPERFAMILY SSF55729 1 142 2.53E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3Y93_07970 4a2c49cc30b4b27376de5dded125250c 432 SUPERFAMILY SSF56112 93 334 2.72E-21 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3Y93_07970 4a2c49cc30b4b27376de5dded125250c 432 Pfam PF03109 ABC1 family 110 227 4.2E-32 T 14-10-2018 IPR004147 UbiB domain C3Y93_02590 1fd84d622ed93b368b0d8c6f35ab748f 122 Gene3D G3DSA:3.40.1260.10 1 122 5.3E-36 T 14-10-2018 IPR027396 DsrEFH-like C3Y93_02590 1fd84d622ed93b368b0d8c6f35ab748f 122 SUPERFAMILY SSF75169 1 122 2.65E-28 T 14-10-2018 IPR027396 DsrEFH-like C3Y93_02590 1fd84d622ed93b368b0d8c6f35ab748f 122 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 122 4.6E-36 T 14-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 C3Y93_02590 1fd84d622ed93b368b0d8c6f35ab748f 122 Pfam PF02635 DsrE/DsrF-like family 1 122 6.2E-20 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein C3Y93_10520 e51d2b9f0d5010195ca6bafc17c03b94 306 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 4 297 1.6E-65 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 C3Y93_10520 e51d2b9f0d5010195ca6bafc17c03b94 306 SUPERFAMILY SSF54909 3 302 1.43E-86 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel C3Y93_10520 e51d2b9f0d5010195ca6bafc17c03b94 306 Pfam PF04261 Dyp-type peroxidase family 39 298 5.9E-69 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 C3Y93_12470 1b0177770e9fd2debd8b26d729dc5131 128 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 128 30.661 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid C3Y93_12470 1b0177770e9fd2debd8b26d729dc5131 128 SUPERFAMILY SSF54211 4 128 3.79E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_12470 1b0177770e9fd2debd8b26d729dc5131 128 Pfam PF00380 Ribosomal protein S9/S16 8 128 1.3E-43 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 C3Y93_12470 1b0177770e9fd2debd8b26d729dc5131 128 ProSitePatterns PS00360 Ribosomal protein S9 signature. 67 85 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 C3Y93_12470 1b0177770e9fd2debd8b26d729dc5131 128 Gene3D G3DSA:3.30.230.10 2 128 1.6E-49 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3Y93_04260 9f15d0d4e8be60ff21e519dbb0a2131a 945 Pfam PF12137 RNA polymerase recycling family C-terminal 585 942 3.5E-118 T 14-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 C3Y93_04260 9f15d0d4e8be60ff21e519dbb0a2131a 945 SMART SM00490 496 580 5.5E-15 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_04260 9f15d0d4e8be60ff21e519dbb0a2131a 945 Gene3D G3DSA:3.40.50.10810 156 427 1.8E-85 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily C3Y93_04260 9f15d0d4e8be60ff21e519dbb0a2131a 945 SUPERFAMILY SSF52540 282 620 5.09E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_04260 9f15d0d4e8be60ff21e519dbb0a2131a 945 Pfam PF00271 Helicase conserved C-terminal domain 476 580 5.6E-11 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_04260 9f15d0d4e8be60ff21e519dbb0a2131a 945 SUPERFAMILY SSF52540 149 385 2.84E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_04260 9f15d0d4e8be60ff21e519dbb0a2131a 945 SMART SM00487 156 355 9.8E-20 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3Y93_04260 9f15d0d4e8be60ff21e519dbb0a2131a 945 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 5 943 26.47 T 14-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 C3Y93_04260 9f15d0d4e8be60ff21e519dbb0a2131a 945 Gene3D G3DSA:3.40.50.300 436 612 9.6E-38 T 14-10-2018 C3Y93_04260 9f15d0d4e8be60ff21e519dbb0a2131a 945 Gene3D G3DSA:3.30.360.80 691 762 7.8E-21 T 14-10-2018 C3Y93_04260 9f15d0d4e8be60ff21e519dbb0a2131a 945 Gene3D G3DSA:2.30.30.930 59 120 2.4E-6 T 14-10-2018 C3Y93_04260 9f15d0d4e8be60ff21e519dbb0a2131a 945 Pfam PF00176 SNF2 family N-terminal domain 180 352 1.6E-11 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 C3Y93_04260 9f15d0d4e8be60ff21e519dbb0a2131a 945 Gene3D G3DSA:2.30.30.140 5 57 1.9E-24 T 14-10-2018 C3Y93_11210 b171cae19acf74b9ed031a6dbc385455 248 Pfam PF01323 DSBA-like thioredoxin domain 2 204 6.4E-44 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 C3Y93_11210 b171cae19acf74b9ed031a6dbc385455 248 SUPERFAMILY SSF52833 1 208 6.08E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_11210 b171cae19acf74b9ed031a6dbc385455 248 Gene3D G3DSA:3.40.30.10 1 207 2.4E-72 T 14-10-2018 C3Y93_09220 e6158ce98d38154e6efee0eada88e19d 284 Pfam PF08478 POTRA domain, FtsQ-type 61 127 1.0E-10 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type C3Y93_09220 e6158ce98d38154e6efee0eada88e19d 284 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 32 253 22.214 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 C3Y93_09220 e6158ce98d38154e6efee0eada88e19d 284 Gene3D G3DSA:3.10.20.310 59 127 9.9E-12 T 14-10-2018 C3Y93_09220 e6158ce98d38154e6efee0eada88e19d 284 Pfam PF03799 Cell division protein FtsQ 132 245 7.7E-17 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB C3Y93_09220 e6158ce98d38154e6efee0eada88e19d 284 Gene3D G3DSA:3.40.50.11690 129 258 3.0E-31 T 14-10-2018 C3Y93_07435 eb17906fd0d7037e542c4734f161de6f 508 SUPERFAMILY SSF117457 317 486 1.57E-64 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 C3Y93_07435 eb17906fd0d7037e542c4734f161de6f 508 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 326 486 1.3E-49 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 C3Y93_07435 eb17906fd0d7037e542c4734f161de6f 508 Pfam PF05681 Fumarate hydratase (Fumerase) 13 285 1.1E-102 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 C3Y93_07435 eb17906fd0d7037e542c4734f161de6f 508 Pfam PF05683 Fumarase C-terminus 289 487 3.1E-79 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 C3Y93_07435 eb17906fd0d7037e542c4734f161de6f 508 PIRSF PIRSF001394 1 505 1.9E-213 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 C3Y93_07435 eb17906fd0d7037e542c4734f161de6f 508 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 14 285 1.2E-68 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 C3Y93_07435 eb17906fd0d7037e542c4734f161de6f 508 Gene3D G3DSA:3.20.130.10 306 487 6.9E-62 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 C3Y93_04445 400297d2431caabe3e5414c9fd9fa89b 251 Gene3D G3DSA:2.40.30.70 1 152 1.0E-43 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily C3Y93_04445 400297d2431caabe3e5414c9fd9fa89b 251 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 5 162 1.0E-36 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain C3Y93_04445 400297d2431caabe3e5414c9fd9fa89b 251 Pfam PF01980 Uncharacterised protein family UPF0066 21 156 1.4E-39 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain C3Y93_04445 400297d2431caabe3e5414c9fd9fa89b 251 SUPERFAMILY SSF118196 5 242 1.44E-66 T 14-10-2018 IPR036413 YaeB-like superfamily C3Y93_04445 400297d2431caabe3e5414c9fd9fa89b 251 Gene3D G3DSA:3.30.2310.10 153 244 1.7E-14 T 14-10-2018 C3Y93_10870 845365b18856f33d19c71f489ca20410 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 7 354 9.3E-102 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 C3Y93_10870 845365b18856f33d19c71f489ca20410 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 354 1.5E-64 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 C3Y93_11805 837e37192780ea53b3dbf62abce2b541 108 Pfam PF00355 Rieske [2Fe-2S] domain 4 93 4.3E-19 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 C3Y93_11805 837e37192780ea53b3dbf62abce2b541 108 Gene3D G3DSA:2.102.10.10 1 107 1.3E-34 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3Y93_11805 837e37192780ea53b3dbf62abce2b541 108 SUPERFAMILY SSF50022 1 105 8.38E-29 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3Y93_12250 47da861e6445835928cddf18973098a3 169 SUPERFAMILY SSF54637 24 162 6.79E-21 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_12250 47da861e6445835928cddf18973098a3 169 Pfam PF14539 Domain of unknown function (DUF4442) 23 158 3.3E-34 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 C3Y93_12250 47da861e6445835928cddf18973098a3 169 Gene3D G3DSA:3.10.129.10 10 162 3.7E-37 T 14-10-2018 C3Y93_13980 dd32eecee31fbbb3eacaa94d53b4805d 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site C3Y93_13980 dd32eecee31fbbb3eacaa94d53b4805d 359 PIRSF PIRSF000525 1 359 4.0E-150 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 C3Y93_13980 dd32eecee31fbbb3eacaa94d53b4805d 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 358 50.175 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 C3Y93_13980 dd32eecee31fbbb3eacaa94d53b4805d 359 Gene3D G3DSA:3.40.640.10 16 249 2.2E-93 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_13980 dd32eecee31fbbb3eacaa94d53b4805d 359 SUPERFAMILY SSF53383 2 357 7.63E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_13980 dd32eecee31fbbb3eacaa94d53b4805d 359 Gene3D G3DSA:3.90.1150.10 250 359 2.2E-44 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_13980 dd32eecee31fbbb3eacaa94d53b4805d 359 Pfam PF00266 Aminotransferase class-V 4 347 7.9E-55 T 14-10-2018 IPR000192 Aminotransferase class V domain C3Y93_13980 dd32eecee31fbbb3eacaa94d53b4805d 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 1.1E-157 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 C3Y93_00170 32002cbf696996d1bac5c2f3e5eb96cc 297 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 26 285 1.7E-126 T 14-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 C3Y93_00170 32002cbf696996d1bac5c2f3e5eb96cc 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 282 2.6E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3Y93_00170 32002cbf696996d1bac5c2f3e5eb96cc 297 Gene3D G3DSA:1.10.3720.10 26 288 1.1E-61 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_00170 32002cbf696996d1bac5c2f3e5eb96cc 297 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 24 283 1.7E-97 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 C3Y93_00170 32002cbf696996d1bac5c2f3e5eb96cc 297 SUPERFAMILY SSF161098 25 279 6.67E-54 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_04655 b2805c5e85248d362d9b5c10ef792f6d 194 SUPERFAMILY SSF53335 5 176 3.44E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_04655 b2805c5e85248d362d9b5c10ef792f6d 194 Pfam PF13649 Methyltransferase domain 40 128 5.2E-12 T 14-10-2018 C3Y93_04655 b2805c5e85248d362d9b5c10ef792f6d 194 Gene3D G3DSA:3.40.50.150 1 194 1.1E-50 T 14-10-2018 C3Y93_04180 1f0de9c9235b8e5cd3247c3e6b8bc042 370 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 149 226 2.8E-17 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 C3Y93_04180 1f0de9c9235b8e5cd3247c3e6b8bc042 370 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 275 365 1.0E-20 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 C3Y93_04180 1f0de9c9235b8e5cd3247c3e6b8bc042 370 Gene3D G3DSA:3.40.47.10 2 212 3.0E-52 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_04180 1f0de9c9235b8e5cd3247c3e6b8bc042 370 Gene3D G3DSA:3.40.47.10 213 367 1.4E-38 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_04180 1f0de9c9235b8e5cd3247c3e6b8bc042 370 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 146 162 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site C3Y93_04180 1f0de9c9235b8e5cd3247c3e6b8bc042 370 SUPERFAMILY SSF53901 2 366 1.61E-49 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 PIRSF PIRSF000185 21 447 4.1E-114 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 Gene3D G3DSA:3.40.50.720 208 372 1.5E-167 T 14-10-2018 C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 SUPERFAMILY SSF51735 201 446 1.28E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 SUPERFAMILY SSF53223 6 195 1.79E-73 T 14-10-2018 C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 445 5.2E-86 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 Gene3D G3DSA:1.10.285.10 7 383 1.5E-167 T 14-10-2018 C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 121 134 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 Gene3D G3DSA:3.40.50.10860 54 189 1.5E-167 T 14-10-2018 C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 56 183 2.3E-48 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 SMART SM00839 203 445 3.0E-88 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 113 127 1.7E-31 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 1.7E-31 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 371 382 1.7E-31 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 1.7E-31 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 C3Y93_05450 e5798003e38b0196b21d82b20181bf8b 447 Gene3D G3DSA:1.10.285.10 384 447 6.0E-11 T 14-10-2018 C3Y93_09240 e67ba66bd83f386fdce6ab1d40feabd1 314 Gene3D G3DSA:3.30.470.20 114 294 1.9E-110 T 14-10-2018 C3Y93_09240 e67ba66bd83f386fdce6ab1d40feabd1 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 296 1.6E-76 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 C3Y93_09240 e67ba66bd83f386fdce6ab1d40feabd1 314 Gene3D G3DSA:3.30.1490.20 136 200 1.9E-110 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3Y93_09240 e67ba66bd83f386fdce6ab1d40feabd1 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 6.0E-41 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 C3Y93_09240 e67ba66bd83f386fdce6ab1d40feabd1 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 310 7.1E-130 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 C3Y93_09240 e67ba66bd83f386fdce6ab1d40feabd1 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 159.938 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 C3Y93_09240 e67ba66bd83f386fdce6ab1d40feabd1 314 SUPERFAMILY SSF56059 122 308 3.74E-56 T 14-10-2018 C3Y93_09240 e67ba66bd83f386fdce6ab1d40feabd1 314 SUPERFAMILY SSF52440 1 121 1.27E-41 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3Y93_09240 e67ba66bd83f386fdce6ab1d40feabd1 314 Gene3D G3DSA:3.40.50.20 6 113 1.9E-110 T 14-10-2018 C3Y93_01290 f7cfaaa24a96701273542c29c0cc602d 182 Gene3D G3DSA:2.40.128.20 12 182 1.8E-46 T 14-10-2018 IPR012674 Calycin C3Y93_01290 f7cfaaa24a96701273542c29c0cc602d 182 Pfam PF08212 Lipocalin-like domain 36 181 2.8E-48 T 14-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain C3Y93_01290 f7cfaaa24a96701273542c29c0cc602d 182 ProSitePatterns PS00213 Lipocalin signature. 37 48 - T 14-10-2018 IPR022272 Lipocalin family conserved site C3Y93_01290 f7cfaaa24a96701273542c29c0cc602d 182 PIRSF PIRSF036893 3 182 1.0E-56 T 14-10-2018 IPR022271 Lipocalin, ApoD type C3Y93_01290 f7cfaaa24a96701273542c29c0cc602d 182 SUPERFAMILY SSF50814 27 182 6.86E-41 T 14-10-2018 IPR012674 Calycin C3Y93_01290 f7cfaaa24a96701273542c29c0cc602d 182 PRINTS PR01171 Bacterial lipocalin signature 129 137 6.0E-9 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 C3Y93_01290 f7cfaaa24a96701273542c29c0cc602d 182 PRINTS PR01171 Bacterial lipocalin signature 171 181 6.0E-9 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 C3Y93_01290 f7cfaaa24a96701273542c29c0cc602d 182 PRINTS PR01171 Bacterial lipocalin signature 144 155 6.0E-9 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 C3Y93_01290 f7cfaaa24a96701273542c29c0cc602d 182 PRINTS PR01171 Bacterial lipocalin signature 36 50 6.0E-9 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 C3Y93_02450 d4189dd2334f776f20b1b82deee0771b 339 SMART SM00861 4 193 6.9E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C3Y93_02450 d4189dd2334f776f20b1b82deee0771b 339 SUPERFAMILY SSF52922 202 337 3.27E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3Y93_02450 d4189dd2334f776f20b1b82deee0771b 339 Pfam PF02780 Transketolase, C-terminal domain 207 329 1.4E-38 T 14-10-2018 IPR033248 Transketolase, C-terminal domain C3Y93_02450 d4189dd2334f776f20b1b82deee0771b 339 SUPERFAMILY SSF52518 4 205 2.94E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3Y93_02450 d4189dd2334f776f20b1b82deee0771b 339 Gene3D G3DSA:3.40.50.920 206 339 1.7E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3Y93_02450 d4189dd2334f776f20b1b82deee0771b 339 Gene3D G3DSA:3.40.50.970 1 205 4.1E-82 T 14-10-2018 C3Y93_02450 d4189dd2334f776f20b1b82deee0771b 339 Pfam PF02779 Transketolase, pyrimidine binding domain 5 192 6.3E-54 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C3Y93_12345 909ffd6c9d7bd4e266d2bc9a029ae4b0 298 Gene3D G3DSA:3.90.226.10 42 297 9.8E-76 T 14-10-2018 C3Y93_12345 909ffd6c9d7bd4e266d2bc9a029ae4b0 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 178 196 5.2E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_12345 909ffd6c9d7bd4e266d2bc9a029ae4b0 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 215 232 5.2E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_12345 909ffd6c9d7bd4e266d2bc9a029ae4b0 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 266 275 5.2E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_12345 909ffd6c9d7bd4e266d2bc9a029ae4b0 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 244 255 5.2E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_12345 909ffd6c9d7bd4e266d2bc9a029ae4b0 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 144 158 5.2E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_12345 909ffd6c9d7bd4e266d2bc9a029ae4b0 298 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 2 296 35.442 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_12345 909ffd6c9d7bd4e266d2bc9a029ae4b0 298 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 42 297 9.6E-112 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_12345 909ffd6c9d7bd4e266d2bc9a029ae4b0 298 Pfam PF01039 Carboxyl transferase domain 108 257 4.4E-16 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 C3Y93_12345 909ffd6c9d7bd4e266d2bc9a029ae4b0 298 SUPERFAMILY SSF52096 43 296 6.57E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_12495 70f6ba7e3658429a5781d17cef1a1037 282 Pfam PF00149 Calcineurin-like phosphoesterase 9 237 1.2E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C3Y93_12495 70f6ba7e3658429a5781d17cef1a1037 282 Gene3D G3DSA:3.60.21.10 7 279 1.0E-63 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C3Y93_12495 70f6ba7e3658429a5781d17cef1a1037 282 SUPERFAMILY SSF56300 8 268 1.33E-45 T 14-10-2018 C3Y93_12495 70f6ba7e3658429a5781d17cef1a1037 282 PIRSF PIRSF000903 5 281 5.5E-92 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 C3Y93_12495 70f6ba7e3658429a5781d17cef1a1037 282 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 7 274 5.0E-83 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 C3Y93_00140 5ab7b77cdaaea260208eadf9e3386703 236 PIRSF PIRSF000370 16 236 5.2E-66 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 C3Y93_00140 5ab7b77cdaaea260208eadf9e3386703 236 Pfam PF13394 4Fe-4S single cluster domain 39 121 1.9E-11 T 14-10-2018 C3Y93_00140 5ab7b77cdaaea260208eadf9e3386703 236 SUPERFAMILY SSF102114 40 119 9.42E-14 T 14-10-2018 C3Y93_00140 5ab7b77cdaaea260208eadf9e3386703 236 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 18 236 1.4E-99 T 14-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE C3Y93_00140 5ab7b77cdaaea260208eadf9e3386703 236 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 18 233 36.904 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 C3Y93_00140 5ab7b77cdaaea260208eadf9e3386703 236 Pfam PF04055 Radical SAM superfamily 42 118 3.2E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3Y93_00140 5ab7b77cdaaea260208eadf9e3386703 236 Gene3D G3DSA:3.20.20.70 18 230 1.2E-35 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_11495 0ca9e353132bb74c1fc8fba5b65b8563 89 SMART SM01387 8 88 5.3E-53 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_11495 0ca9e353132bb74c1fc8fba5b65b8563 89 Gene3D G3DSA:1.10.287.10 2 89 6.4E-36 T 14-10-2018 C3Y93_11495 0ca9e353132bb74c1fc8fba5b65b8563 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.442 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_11495 0ca9e353132bb74c1fc8fba5b65b8563 89 Pfam PF00312 Ribosomal protein S15 9 88 1.3E-37 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_11495 0ca9e353132bb74c1fc8fba5b65b8563 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-35 T 14-10-2018 C3Y93_11495 0ca9e353132bb74c1fc8fba5b65b8563 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_11495 0ca9e353132bb74c1fc8fba5b65b8563 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.2E-38 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_11495 0ca9e353132bb74c1fc8fba5b65b8563 89 SUPERFAMILY SSF47060 3 89 2.68E-35 T 14-10-2018 IPR009068 S15/NS1, RNA-binding C3Y93_11560 d4117b3f0cfd286baf6c4d87bb38bb97 279 SMART SM00116 131 179 12.0 T 14-10-2018 IPR000644 CBS domain C3Y93_11560 d4117b3f0cfd286baf6c4d87bb38bb97 279 SMART SM00116 67 117 0.064 T 14-10-2018 IPR000644 CBS domain C3Y93_11560 d4117b3f0cfd286baf6c4d87bb38bb97 279 Pfam PF03471 Transporter associated domain 206 278 3.3E-16 T 14-10-2018 IPR005170 Transporter-associated domain C3Y93_11560 d4117b3f0cfd286baf6c4d87bb38bb97 279 SUPERFAMILY SSF54631 55 191 2.44E-32 T 14-10-2018 C3Y93_11560 d4117b3f0cfd286baf6c4d87bb38bb97 279 Gene3D G3DSA:3.10.580.10 38 190 3.1E-51 T 14-10-2018 C3Y93_11560 d4117b3f0cfd286baf6c4d87bb38bb97 279 Pfam PF00571 CBS domain 59 113 1.2E-5 T 14-10-2018 IPR000644 CBS domain C3Y93_11560 d4117b3f0cfd286baf6c4d87bb38bb97 279 Pfam PF00571 CBS domain 126 179 1.9E-6 T 14-10-2018 IPR000644 CBS domain C3Y93_11560 d4117b3f0cfd286baf6c4d87bb38bb97 279 SMART SM01091 201 279 7.7E-15 T 14-10-2018 IPR005170 Transporter-associated domain C3Y93_11560 d4117b3f0cfd286baf6c4d87bb38bb97 279 Gene3D G3DSA:3.30.465.10 201 278 6.7E-20 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C3Y93_11560 d4117b3f0cfd286baf6c4d87bb38bb97 279 SUPERFAMILY SSF56176 205 278 2.67E-15 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3Y93_00980 f1c05a0168b409ed01509e44f0119ca0 405 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 9 399 50.06 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 C3Y93_00980 f1c05a0168b409ed01509e44f0119ca0 405 Gene3D G3DSA:3.30.470.20 199 405 2.6E-61 T 14-10-2018 C3Y93_00980 f1c05a0168b409ed01509e44f0119ca0 405 Gene3D G3DSA:3.40.50.20 3 124 7.4E-49 T 14-10-2018 C3Y93_00980 f1c05a0168b409ed01509e44f0119ca0 405 Gene3D G3DSA:3.30.1490.20 125 198 1.1E-30 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3Y93_00980 f1c05a0168b409ed01509e44f0119ca0 405 Pfam PF02222 ATP-grasp domain 125 303 8.3E-50 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type C3Y93_00980 f1c05a0168b409ed01509e44f0119ca0 405 SUPERFAMILY SSF52440 4 114 3.45E-28 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3Y93_00980 f1c05a0168b409ed01509e44f0119ca0 405 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 15 399 6.6E-168 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 C3Y93_00980 f1c05a0168b409ed01509e44f0119ca0 405 SUPERFAMILY SSF56059 115 322 9.37E-55 T 14-10-2018 C3Y93_00980 f1c05a0168b409ed01509e44f0119ca0 405 SUPERFAMILY SSF51246 328 398 5.65E-17 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 PIRSF PIRSF000729 10 377 2.6E-129 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 SUPERFAMILY SSF88697 286 375 5.47E-20 T 14-10-2018 IPR015947 PUA-like superfamily C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 15 268 35.606 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 Gene3D G3DSA:2.30.130.10 275 377 1.8E-30 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 PRINTS PR00474 Glutamate 5-kinase family signature 126 147 4.0E-48 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 PRINTS PR00474 Glutamate 5-kinase family signature 158 185 4.0E-48 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 PRINTS PR00474 Glutamate 5-kinase family signature 86 114 4.0E-48 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 PRINTS PR00474 Glutamate 5-kinase family signature 52 66 4.0E-48 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 4.0E-48 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 Gene3D G3DSA:3.40.1160.10 5 274 1.1E-93 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 15 375 5.3E-128 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 SUPERFAMILY SSF53633 15 265 9.16E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 Pfam PF01472 PUA domain 286 360 5.7E-22 T 14-10-2018 IPR002478 PUA domain GO:0003723 C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 Pfam PF00696 Amino acid kinase family 15 244 4.0E-47 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 C3Y93_00340 52acd43c58485e89ba8d5b1e3c05551e 377 SMART SM00359 286 360 1.9E-16 T 14-10-2018 IPR002478 PUA domain GO:0003723 C3Y93_05295 a8865b3493c5ee287c62da6767935170 133 SMART SM00530 79 132 1.2E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_05295 a8865b3493c5ee287c62da6767935170 133 Gene3D G3DSA:1.10.260.40 77 133 4.1E-7 T 14-10-2018 C3Y93_05295 a8865b3493c5ee287c62da6767935170 133 Pfam PF01381 Helix-turn-helix 84 131 1.7E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_05295 a8865b3493c5ee287c62da6767935170 133 SUPERFAMILY SSF47413 79 133 1.3E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 Pfam PF13180 PDZ domain 370 453 2.3E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 Pfam PF13180 PDZ domain 260 349 1.1E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 Gene3D G3DSA:2.30.42.10 369 460 4.5E-17 T 14-10-2018 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 Gene3D G3DSA:2.40.10.120 28 252 1.8E-74 T 14-10-2018 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 Gene3D G3DSA:2.30.42.10 254 357 4.1E-29 T 14-10-2018 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 SMART SM00228 370 450 2.2E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 SMART SM00228 259 341 3.6E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 PRINTS PR00834 HtrA/DegQ protease family signature 117 137 4.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 PRINTS PR00834 HtrA/DegQ protease family signature 96 108 4.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 PRINTS PR00834 HtrA/DegQ protease family signature 157 181 4.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 PRINTS PR00834 HtrA/DegQ protease family signature 213 230 4.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 PRINTS PR00834 HtrA/DegQ protease family signature 299 311 4.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 PRINTS PR00834 HtrA/DegQ protease family signature 191 208 4.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 SUPERFAMILY SSF50156 370 457 3.68E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 29 455 1.1E-136 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 SUPERFAMILY SSF50494 10 268 2.02E-61 T 14-10-2018 IPR009003 Peptidase S1, PA clan C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 SUPERFAMILY SSF50156 230 354 2.56E-23 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3Y93_00220 63fcf7c8e5ba06097f7312c293885bc5 460 Pfam PF13365 Trypsin-like peptidase domain 87 220 4.4E-33 T 14-10-2018 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 SUPERFAMILY SSF52374 8 652 3.55E-138 T 14-10-2018 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 SUPERFAMILY SSF50677 196 367 1.7E-52 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 Gene3D G3DSA:1.10.730.10 589 830 9.0E-72 T 14-10-2018 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 20 642 1.1E-206 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 58 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 Gene3D G3DSA:3.90.740.10 210 361 2.6E-34 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 SUPERFAMILY SSF46589 897 961 1.67E-15 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 Gene3D G3DSA:3.40.50.620 9 209 1.4E-68 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 Pfam PF08264 Anticodon-binding domain of tRNA 685 833 3.1E-40 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 TIGRFAM TIGR00422 valS: valine--tRNA ligase 9 944 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 Gene3D G3DSA:1.10.287.380 890 962 3.3E-21 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 897 961 1.3E-20 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 PRINTS PR00986 Valyl-tRNA synthetase signature 374 387 1.0E-31 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 PRINTS PR00986 Valyl-tRNA synthetase signature 474 495 1.0E-31 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 PRINTS PR00986 Valyl-tRNA synthetase signature 511 529 1.0E-31 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 PRINTS PR00986 Valyl-tRNA synthetase signature 40 51 1.0E-31 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 PRINTS PR00986 Valyl-tRNA synthetase signature 242 259 1.0E-31 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 962 15.731 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 SUPERFAMILY SSF47323 654 912 6.35E-69 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_12960 ef5bbe799e72393c9c1ec2b19bcec6f4 964 Gene3D G3DSA:3.40.50.620 372 564 1.8E-44 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_13030 e57ab78f0d8f6ef73770ca6c54aaf40b 232 SUPERFAMILY SSF89392 39 232 6.67E-46 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX C3Y93_13030 e57ab78f0d8f6ef73770ca6c54aaf40b 232 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 36 232 6.6E-24 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 C3Y93_13030 e57ab78f0d8f6ef73770ca6c54aaf40b 232 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 48 222 1.4E-38 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like C3Y93_13030 e57ab78f0d8f6ef73770ca6c54aaf40b 232 Gene3D G3DSA:2.50.20.10 35 232 2.4E-52 T 14-10-2018 C3Y93_13030 e57ab78f0d8f6ef73770ca6c54aaf40b 232 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 20 232 28.931 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 C3Y93_00245 d268efb6bfa2c9591e31624d8ea90444 233 Pfam PF14622 Ribonuclease-III-like 24 141 1.7E-33 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 C3Y93_00245 d268efb6bfa2c9591e31624d8ea90444 233 Gene3D G3DSA:3.30.160.20 160 231 6.4E-17 T 14-10-2018 C3Y93_00245 d268efb6bfa2c9591e31624d8ea90444 233 ProSitePatterns PS00517 Ribonuclease III family signature. 43 51 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 C3Y93_00245 d268efb6bfa2c9591e31624d8ea90444 233 SUPERFAMILY SSF54768 114 228 2.04E-25 T 14-10-2018 C3Y93_00245 d268efb6bfa2c9591e31624d8ea90444 233 SUPERFAMILY SSF69065 9 164 6.98E-47 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 C3Y93_00245 d268efb6bfa2c9591e31624d8ea90444 233 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 14 226 7.1E-70 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 C3Y93_00245 d268efb6bfa2c9591e31624d8ea90444 233 Hamap MF_00104 Ribonuclease 3 [rnc]. 13 225 29.06 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 C3Y93_00245 d268efb6bfa2c9591e31624d8ea90444 233 SMART SM00358 162 229 8.9E-17 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain C3Y93_00245 d268efb6bfa2c9591e31624d8ea90444 233 SMART SM00535 25 155 1.4E-45 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 C3Y93_00245 d268efb6bfa2c9591e31624d8ea90444 233 Pfam PF00035 Double-stranded RNA binding motif 162 226 4.0E-11 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain C3Y93_00245 d268efb6bfa2c9591e31624d8ea90444 233 Gene3D G3DSA:1.10.1520.10 6 154 1.6E-44 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 Gene3D G3DSA:1.10.150.20 434 492 9.8E-21 T 14-10-2018 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 Gene3D G3DSA:2.40.50.140 140 203 2.3E-14 T 14-10-2018 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 415 27.716 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 SUPERFAMILY SSF54814 206 283 1.24E-28 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 SUPERFAMILY SSF69705 1 130 9.68E-33 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 Gene3D G3DSA:3.30.300.20 283 352 1.0E-20 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 SUPERFAMILY SSF54814 284 345 7.85E-11 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 Pfam PF08529 NusA N-terminal domain 4 128 1.1E-34 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 SMART SM00316 138 203 4.4E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 SUPERFAMILY SSF47794 360 419 9.1E-10 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 Pfam PF13184 NusA-like KH domain 235 302 9.3E-28 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 Gene3D G3DSA:3.30.300.20 204 282 3.0E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 Gene3D G3DSA:1.10.150.20 358 426 7.9E-16 T 14-10-2018 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 SUPERFAMILY SSF50249 138 204 1.14E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 1.9E-107 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 Gene3D G3DSA:3.30.1480.10 1 133 1.4E-34 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 Pfam PF14520 Helix-hairpin-helix domain 435 490 1.3E-8 T 14-10-2018 C3Y93_11385 1fc64731038048b505f7c981d589c3dc 494 SUPERFAMILY SSF47794 431 493 1.88E-14 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 C3Y93_02360 df745c8e5812528a23b9ef28e9ac6b5c 222 SMART SM00862 145 216 5.8E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_02360 df745c8e5812528a23b9ef28e9ac6b5c 222 Pfam PF00072 Response regulator receiver domain 3 112 2.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_02360 df745c8e5812528a23b9ef28e9ac6b5c 222 Gene3D G3DSA:3.40.50.2300 1 121 3.1E-33 T 14-10-2018 C3Y93_02360 df745c8e5812528a23b9ef28e9ac6b5c 222 SUPERFAMILY SSF52172 3 173 1.01E-36 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_02360 df745c8e5812528a23b9ef28e9ac6b5c 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 1.6E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_02360 df745c8e5812528a23b9ef28e9ac6b5c 222 SMART SM00448 1 112 1.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_02360 df745c8e5812528a23b9ef28e9ac6b5c 222 Gene3D G3DSA:1.10.10.10 122 220 1.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_11795 0abd1cc7f52812a8f3c3924dd79bb43b 455 Gene3D G3DSA:2.102.10.10 43 172 9.0E-155 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3Y93_11795 0abd1cc7f52812a8f3c3924dd79bb43b 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 1.7E-59 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_11795 0abd1cc7f52812a8f3c3924dd79bb43b 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 185 207 1.7E-59 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_11795 0abd1cc7f52812a8f3c3924dd79bb43b 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 1.7E-59 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_11795 0abd1cc7f52812a8f3c3924dd79bb43b 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 144 170 1.7E-59 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_11795 0abd1cc7f52812a8f3c3924dd79bb43b 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 1.7E-59 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_11795 0abd1cc7f52812a8f3c3924dd79bb43b 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 28 53 1.7E-59 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_11795 0abd1cc7f52812a8f3c3924dd79bb43b 455 SUPERFAMILY SSF50022 13 159 3.01E-50 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3Y93_11795 0abd1cc7f52812a8f3c3924dd79bb43b 455 Gene3D G3DSA:3.90.380.10 18 434 9.0E-155 T 14-10-2018 C3Y93_11795 0abd1cc7f52812a8f3c3924dd79bb43b 455 Pfam PF00355 Rieske [2Fe-2S] domain 43 126 1.1E-21 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 C3Y93_11795 0abd1cc7f52812a8f3c3924dd79bb43b 455 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 165 434 7.4E-44 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 C3Y93_11795 0abd1cc7f52812a8f3c3924dd79bb43b 455 SUPERFAMILY SSF55961 162 445 3.3E-63 T 14-10-2018 C3Y93_09535 c12821770ab04868dbb8d8d8284f7b59 246 Pfam PF01738 Dienelactone hydrolase family 22 242 1.5E-45 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 C3Y93_09535 c12821770ab04868dbb8d8d8284f7b59 246 SUPERFAMILY SSF53474 6 242 1.05E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_09535 c12821770ab04868dbb8d8d8284f7b59 246 Gene3D G3DSA:3.40.50.1820 1 244 2.5E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_02255 c69688d846c67237a4351b8f72511dcc 449 SUPERFAMILY SSF63411 256 445 1.59E-28 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3Y93_02255 c69688d846c67237a4351b8f72511dcc 449 SUPERFAMILY SSF63411 30 246 1.83E-59 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3Y93_02255 c69688d846c67237a4351b8f72511dcc 449 Gene3D G3DSA:3.30.830.10 27 248 1.2E-77 T 14-10-2018 C3Y93_02255 c69688d846c67237a4351b8f72511dcc 449 Pfam PF00675 Insulinase (Peptidase family M16) 41 187 1.5E-24 T 14-10-2018 IPR011765 Peptidase M16, N-terminal C3Y93_02255 c69688d846c67237a4351b8f72511dcc 449 Pfam PF05193 Peptidase M16 inactive domain 195 377 1.7E-29 T 14-10-2018 IPR007863 Peptidase M16, C-terminal C3Y93_02255 c69688d846c67237a4351b8f72511dcc 449 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 62 85 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 C3Y93_02255 c69688d846c67237a4351b8f72511dcc 449 Gene3D G3DSA:3.30.830.10 250 444 1.3E-42 T 14-10-2018 C3Y93_09975 9351f8789e72dc5fa890d3840537ae65 320 Pfam PF02911 Formyl transferase, C-terminal domain 211 309 1.3E-23 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3Y93_09975 9351f8789e72dc5fa890d3840537ae65 320 SUPERFAMILY SSF53328 2 187 1.57E-60 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3Y93_09975 9351f8789e72dc5fa890d3840537ae65 320 Pfam PF00551 Formyl transferase 2 185 4.6E-47 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3Y93_09975 9351f8789e72dc5fa890d3840537ae65 320 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 317 1.1E-92 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 C3Y93_09975 9351f8789e72dc5fa890d3840537ae65 320 SUPERFAMILY SSF50486 212 319 1.88E-25 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 C3Y93_09975 9351f8789e72dc5fa890d3840537ae65 320 Gene3D G3DSA:3.40.50.170 1 213 2.1E-77 T 14-10-2018 C3Y93_09975 9351f8789e72dc5fa890d3840537ae65 320 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 314 35.089 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 C3Y93_09975 9351f8789e72dc5fa890d3840537ae65 320 Gene3D G3DSA:3.10.25.10 214 320 4.9E-26 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3Y93_02625 4d9e95c1bf2f1e5c1cb4484713d11ff8 295 SUPERFAMILY SSF103481 202 294 2.75E-8 T 14-10-2018 C3Y93_02625 4d9e95c1bf2f1e5c1cb4484713d11ff8 295 Pfam PF00892 EamA-like transporter family 4 142 1.2E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_02625 4d9e95c1bf2f1e5c1cb4484713d11ff8 295 SUPERFAMILY SSF103481 39 147 1.03E-9 T 14-10-2018 C3Y93_00240 cd5a6cfda2b3b0058c22532c4650866a 123 Pfam PF16137 Domain of unknown function (DUF4845) 33 111 1.7E-12 T 14-10-2018 IPR032314 Protein of unknown function DUF4845 C3Y93_07740 7565f0bba13127ad8763ed80e9ed9605 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.5E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 C3Y93_07740 7565f0bba13127ad8763ed80e9ed9605 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.999 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 C3Y93_07740 7565f0bba13127ad8763ed80e9ed9605 122 SMART SM01374 1 122 9.2E-85 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 C3Y93_07740 7565f0bba13127ad8763ed80e9ed9605 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07740 7565f0bba13127ad8763ed80e9ed9605 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 5.3E-57 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 C3Y93_07740 7565f0bba13127ad8763ed80e9ed9605 122 SUPERFAMILY SSF50193 1 122 6.28E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 C3Y93_07740 7565f0bba13127ad8763ed80e9ed9605 122 Gene3D G3DSA:2.40.150.20 1 122 6.2E-54 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 C3Y93_07060 c99b2073f707939b25294df40de18338 352 Gene3D G3DSA:3.40.50.720 2 323 1.6E-135 T 14-10-2018 C3Y93_07060 c99b2073f707939b25294df40de18338 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 1.2E-98 T 14-10-2018 IPR016040 NAD(P)-binding domain C3Y93_07060 c99b2073f707939b25294df40de18338 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 337 3.6E-156 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 C3Y93_07060 c99b2073f707939b25294df40de18338 352 SUPERFAMILY SSF51735 1 344 7.83E-94 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_07060 c99b2073f707939b25294df40de18338 352 Gene3D G3DSA:3.90.25.10 201 331 1.6E-135 T 14-10-2018 C3Y93_07820 1a478895ddfcc4b6fbf5c17569662183 147 SUPERFAMILY SSF46785 2 131 9.98E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_07820 1a478895ddfcc4b6fbf5c17569662183 147 Pfam PF02082 Transcriptional regulator 1 81 2.8E-18 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type C3Y93_07820 1a478895ddfcc4b6fbf5c17569662183 147 Gene3D G3DSA:1.10.10.10 1 139 9.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_07820 1a478895ddfcc4b6fbf5c17569662183 147 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 5.7E-25 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type C3Y93_00510 bfa810bcb4097721a1a00b9ae6639ba4 338 PIRSF PIRSF004911 4 337 2.5E-109 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase C3Y93_00510 bfa810bcb4097721a1a00b9ae6639ba4 338 Pfam PF13353 4Fe-4S single cluster domain 112 172 1.6E-5 T 14-10-2018 C3Y93_00510 bfa810bcb4097721a1a00b9ae6639ba4 338 Gene3D G3DSA:3.20.20.70 46 331 5.8E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_00510 bfa810bcb4097721a1a00b9ae6639ba4 338 TIGRFAM TIGR00238 TIGR00238: KamA family protein 8 325 2.1E-102 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase C3Y93_00510 bfa810bcb4097721a1a00b9ae6639ba4 338 SUPERFAMILY SSF102114 100 322 1.83E-22 T 14-10-2018 C3Y93_00510 bfa810bcb4097721a1a00b9ae6639ba4 338 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 11 332 7.4E-137 T 14-10-2018 IPR022462 Lysine-2,3-aminomutase-like C3Y93_07225 dc62077f0d906fb09a23270eab3ddb21 217 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 97 171 8.9E-14 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 C3Y93_07225 dc62077f0d906fb09a23270eab3ddb21 217 SUPERFAMILY SSF56214 96 200 3.14E-21 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 C3Y93_07225 dc62077f0d906fb09a23270eab3ddb21 217 Gene3D G3DSA:3.90.470.20 97 197 2.1E-16 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 C3Y93_07225 dc62077f0d906fb09a23270eab3ddb21 217 SUPERFAMILY SSF56214 36 87 5.76E-11 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 C3Y93_04940 78de005cad09f6a1196c359c15ef6f27 202 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 107 198 9.1E-43 T 14-10-2018 IPR012997 Rare lipoprotein A C3Y93_04940 78de005cad09f6a1196c359c15ef6f27 202 SUPERFAMILY SSF50685 105 197 4.53E-15 T 14-10-2018 IPR036908 RlpA-like domain superfamily C3Y93_04940 78de005cad09f6a1196c359c15ef6f27 202 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 12 197 24.828 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 C3Y93_04940 78de005cad09f6a1196c359c15ef6f27 202 Pfam PF03330 Lytic transglycolase 105 193 5.0E-28 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain C3Y93_04940 78de005cad09f6a1196c359c15ef6f27 202 Gene3D G3DSA:2.40.40.10 104 198 4.4E-41 T 14-10-2018 IPR036908 RlpA-like domain superfamily C3Y93_03200 99e9c116be54f49a7259e4ea76d438f0 349 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 349 2.8E-127 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3Y93_03200 99e9c116be54f49a7259e4ea76d438f0 349 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 343 42.323 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3Y93_03200 99e9c116be54f49a7259e4ea76d438f0 349 SUPERFAMILY SSF55347 149 317 2.9E-46 T 14-10-2018 C3Y93_03200 99e9c116be54f49a7259e4ea76d438f0 349 Gene3D G3DSA:3.30.360.10 147 317 2.6E-127 T 14-10-2018 C3Y93_03200 99e9c116be54f49a7259e4ea76d438f0 349 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 141 2.0E-38 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 C3Y93_03200 99e9c116be54f49a7259e4ea76d438f0 349 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3Y93_03200 99e9c116be54f49a7259e4ea76d438f0 349 Gene3D G3DSA:3.40.50.720 4 335 2.6E-127 T 14-10-2018 C3Y93_03200 99e9c116be54f49a7259e4ea76d438f0 349 SUPERFAMILY SSF51735 2 164 1.14E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_03200 99e9c116be54f49a7259e4ea76d438f0 349 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 158 320 2.7E-19 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3Y93_03200 99e9c116be54f49a7259e4ea76d438f0 349 SMART SM00859 3 141 4.2E-60 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 C3Y93_12730 f8aad0edb82536aedd58e0a2cc459052 113 SUPERFAMILY SSF160113 60 109 6.67E-17 T 14-10-2018 IPR036913 YegP-like superfamily C3Y93_12730 f8aad0edb82536aedd58e0a2cc459052 113 SUPERFAMILY SSF160113 1 57 6.67E-20 T 14-10-2018 IPR036913 YegP-like superfamily C3Y93_12730 f8aad0edb82536aedd58e0a2cc459052 113 Gene3D G3DSA:2.30.29.80 1 113 1.3E-50 T 14-10-2018 C3Y93_12730 f8aad0edb82536aedd58e0a2cc459052 113 Pfam PF07411 Domain of unknown function (DUF1508) 10 57 1.5E-22 T 14-10-2018 IPR010879 Domain of unknown function DUF1508 C3Y93_12730 f8aad0edb82536aedd58e0a2cc459052 113 Pfam PF07411 Domain of unknown function (DUF1508) 62 108 3.0E-21 T 14-10-2018 IPR010879 Domain of unknown function DUF1508 C3Y93_06140 4f76cf6dc498db173980de0daaf839ff 165 Gene3D G3DSA:3.10.129.10 8 165 1.5E-40 T 14-10-2018 C3Y93_06140 4f76cf6dc498db173980de0daaf839ff 165 Pfam PF03061 Thioesterase superfamily 68 154 1.6E-12 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 C3Y93_06140 4f76cf6dc498db173980de0daaf839ff 165 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 42 159 7.3E-12 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 C3Y93_06140 4f76cf6dc498db173980de0daaf839ff 165 SUPERFAMILY SSF54637 24 163 7.47E-22 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_13210 c1c6bbeb5e22b258266938bfaaa090a2 189 Pfam PF03358 NADPH-dependent FMN reductase 14 128 6.8E-13 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 C3Y93_13210 c1c6bbeb5e22b258266938bfaaa090a2 189 SUPERFAMILY SSF52218 14 185 4.59E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3Y93_13210 c1c6bbeb5e22b258266938bfaaa090a2 189 Gene3D G3DSA:3.40.50.360 9 188 7.8E-52 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3Y93_13210 c1c6bbeb5e22b258266938bfaaa090a2 189 ProSitePatterns PS00201 Flavodoxin signature. 17 33 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 C3Y93_04220 580fef2b553880dcc0519e667dfc2a28 348 Pfam PF03060 Nitronate monooxygenase 3 342 1.7E-75 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 C3Y93_04220 580fef2b553880dcc0519e667dfc2a28 348 Gene3D G3DSA:3.20.20.70 1 345 1.9E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_04220 580fef2b553880dcc0519e667dfc2a28 348 SUPERFAMILY SSF51412 3 341 1.47E-56 T 14-10-2018 C3Y93_07455 2ea145ac5b14c00d3e4c5521bf0ec563 443 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 418 2.0E-37 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 C3Y93_07455 2ea145ac5b14c00d3e4c5521bf0ec563 443 SUPERFAMILY SSF102735 1 126 8.89E-36 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 C3Y93_07455 2ea145ac5b14c00d3e4c5521bf0ec563 443 SUPERFAMILY SSF109998 246 435 4.05E-44 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily C3Y93_07455 2ea145ac5b14c00d3e4c5521bf0ec563 443 Gene3D G3DSA:3.30.70.1050 1 114 3.6E-35 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 C3Y93_07455 2ea145ac5b14c00d3e4c5521bf0ec563 443 PIRSF PIRSF003095 1 440 6.9E-125 T 14-10-2018 IPR005215 Trigger factor GO:0015031 C3Y93_07455 2ea145ac5b14c00d3e4c5521bf0ec563 443 TIGRFAM TIGR00115 tig: trigger factor 12 418 1.7E-137 T 14-10-2018 IPR005215 Trigger factor GO:0015031 C3Y93_07455 2ea145ac5b14c00d3e4c5521bf0ec563 443 SUPERFAMILY SSF54534 130 245 2.16E-32 T 14-10-2018 C3Y93_07455 2ea145ac5b14c00d3e4c5521bf0ec563 443 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 2.3E-40 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 C3Y93_07455 2ea145ac5b14c00d3e4c5521bf0ec563 443 Gene3D G3DSA:3.10.50.40 148 244 1.8E-93 T 14-10-2018 C3Y93_07455 2ea145ac5b14c00d3e4c5521bf0ec563 443 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 235 5.8E-16 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain C3Y93_07455 2ea145ac5b14c00d3e4c5521bf0ec563 443 Hamap MF_00303 Trigger factor [tig]. 1 424 21.4 T 14-10-2018 IPR005215 Trigger factor GO:0015031 C3Y93_07455 2ea145ac5b14c00d3e4c5521bf0ec563 443 Gene3D G3DSA:1.10.3120.10 115 423 1.8E-93 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 C3Y93_02455 afeac827d9b1192d8471cda9dad7c03c 511 SUPERFAMILY SSF47005 154 198 7.06E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 C3Y93_02455 afeac827d9b1192d8471cda9dad7c03c 511 Gene3D G3DSA:3.30.559.10 270 509 1.2E-87 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 C3Y93_02455 afeac827d9b1192d8471cda9dad7c03c 511 SUPERFAMILY SSF51230 4 92 4.45E-20 T 14-10-2018 IPR011053 Single hybrid motif C3Y93_02455 afeac827d9b1192d8471cda9dad7c03c 511 Gene3D G3DSA:2.40.50.100 1 100 2.0E-22 T 14-10-2018 C3Y93_02455 afeac827d9b1192d8471cda9dad7c03c 511 Pfam PF00364 Biotin-requiring enzyme 6 77 6.9E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C3Y93_02455 afeac827d9b1192d8471cda9dad7c03c 511 SUPERFAMILY SSF52777 276 510 2.71E-78 T 14-10-2018 C3Y93_02455 afeac827d9b1192d8471cda9dad7c03c 511 SUPERFAMILY SSF47005 220 264 1.7E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 C3Y93_02455 afeac827d9b1192d8471cda9dad7c03c 511 Gene3D G3DSA:4.10.320.10 154 201 1.1E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 C3Y93_02455 afeac827d9b1192d8471cda9dad7c03c 511 Gene3D G3DSA:4.10.320.10 225 267 1.5E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 C3Y93_02455 afeac827d9b1192d8471cda9dad7c03c 511 Pfam PF02817 e3 binding domain 225 260 1.1E-11 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 C3Y93_02455 afeac827d9b1192d8471cda9dad7c03c 511 Pfam PF02817 e3 binding domain 159 194 1.7E-10 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 C3Y93_02455 afeac827d9b1192d8471cda9dad7c03c 511 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 284 510 2.0E-81 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 C3Y93_02455 afeac827d9b1192d8471cda9dad7c03c 511 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 C3Y93_10920 225b3db619a6a706d57d684ceb035c1c 305 Gene3D G3DSA:1.10.443.10 119 299 2.8E-68 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3Y93_10920 225b3db619a6a706d57d684ceb035c1c 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 21 97 3.0E-14 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 C3Y93_10920 225b3db619a6a706d57d684ceb035c1c 305 SUPERFAMILY SSF56349 20 296 4.12E-58 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3Y93_10920 225b3db619a6a706d57d684ceb035c1c 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 30 305 3.2E-108 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 C3Y93_10920 225b3db619a6a706d57d684ceb035c1c 305 Pfam PF00589 Phage integrase family 122 290 9.2E-51 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3Y93_10920 225b3db619a6a706d57d684ceb035c1c 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 17 305 54.983 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 C3Y93_10920 225b3db619a6a706d57d684ceb035c1c 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 19 305 55.442 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD C3Y93_10920 225b3db619a6a706d57d684ceb035c1c 305 Gene3D G3DSA:1.10.150.130 18 108 2.0E-15 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C3Y93_06525 54276a2dd50e67f04eab63da589e660c 484 Gene3D G3DSA:1.10.10.60 424 482 5.2E-25 T 14-10-2018 C3Y93_06525 54276a2dd50e67f04eab63da589e660c 484 Gene3D G3DSA:1.10.10.1330 118 257 1.4E-20 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily C3Y93_06525 54276a2dd50e67f04eab63da589e660c 484 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 462 469 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3Y93_06525 54276a2dd50e67f04eab63da589e660c 484 PIRSF PIRSF000774 1 483 1.5E-141 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3Y93_06525 54276a2dd50e67f04eab63da589e660c 484 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 48 1.2E-13 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3Y93_06525 54276a2dd50e67f04eab63da589e660c 484 Pfam PF04963 Sigma-54 factor, core binding domain 114 310 4.5E-52 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 C3Y93_06525 54276a2dd50e67f04eab63da589e660c 484 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 481 1.4E-151 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3Y93_06525 54276a2dd50e67f04eab63da589e660c 484 PRINTS PR00045 Sigma-54 factor signature 457 475 3.4E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3Y93_06525 54276a2dd50e67f04eab63da589e660c 484 PRINTS PR00045 Sigma-54 factor signature 383 395 3.4E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3Y93_06525 54276a2dd50e67f04eab63da589e660c 484 PRINTS PR00045 Sigma-54 factor signature 194 211 3.4E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3Y93_06525 54276a2dd50e67f04eab63da589e660c 484 PRINTS PR00045 Sigma-54 factor signature 399 410 3.4E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3Y93_06525 54276a2dd50e67f04eab63da589e660c 484 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 371 390 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C3Y93_06525 54276a2dd50e67f04eab63da589e660c 484 Pfam PF04552 Sigma-54, DNA binding domain 324 481 4.1E-68 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding C3Y93_03540 2b99a3d003e6e0db63994a44e1317ea3 234 Pfam PF00196 Bacterial regulatory proteins, luxR family 173 227 5.7E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_03540 2b99a3d003e6e0db63994a44e1317ea3 234 ProSitePatterns PS00622 LuxR-type HTH domain signature. 188 215 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_03540 2b99a3d003e6e0db63994a44e1317ea3 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 204 9.9E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_03540 2b99a3d003e6e0db63994a44e1317ea3 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 216 9.9E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_03540 2b99a3d003e6e0db63994a44e1317ea3 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 188 9.9E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_03540 2b99a3d003e6e0db63994a44e1317ea3 234 SUPERFAMILY SSF52172 11 204 3.07E-24 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_03540 2b99a3d003e6e0db63994a44e1317ea3 234 SMART SM00448 10 124 7.0E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_03540 2b99a3d003e6e0db63994a44e1317ea3 234 Gene3D G3DSA:1.10.10.10 113 234 8.2E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_03540 2b99a3d003e6e0db63994a44e1317ea3 234 Pfam PF00072 Response regulator receiver domain 12 124 3.4E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_03540 2b99a3d003e6e0db63994a44e1317ea3 234 Gene3D G3DSA:3.40.50.2300 10 112 9.9E-16 T 14-10-2018 C3Y93_03540 2b99a3d003e6e0db63994a44e1317ea3 234 SMART SM00421 171 228 3.6E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_05495 4ada7bfaf0a79f7fbb5a7b69d0fb61c7 40 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 40 17.239 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_05495 4ada7bfaf0a79f7fbb5a7b69d0fb61c7 40 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 40 5.7E-11 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_05495 4ada7bfaf0a79f7fbb5a7b69d0fb61c7 40 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 16 40 0.002 T 14-10-2018 C3Y93_05495 4ada7bfaf0a79f7fbb5a7b69d0fb61c7 40 Pfam PF00444 Ribosomal protein L36 1 40 6.6E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_05495 4ada7bfaf0a79f7fbb5a7b69d0fb61c7 40 SUPERFAMILY SSF57840 1 40 2.09E-14 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_13195 93b95bf879c1338d7b7a570dccef2e19 326 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 253 1.6E-75 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD C3Y93_13195 93b95bf879c1338d7b7a570dccef2e19 326 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 7 251 34.591 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD C3Y93_13195 93b95bf879c1338d7b7a570dccef2e19 326 SUPERFAMILY SSF48452 43 128 1.08E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_13195 93b95bf879c1338d7b7a570dccef2e19 326 Gene3D G3DSA:1.25.40.10 39 260 1.6E-51 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_13195 93b95bf879c1338d7b7a570dccef2e19 326 Pfam PF13525 Outer membrane lipoprotein 39 242 1.7E-57 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like C3Y93_05790 6d17121ac0906d56d021d0808ae9b537 151 Pfam PF13565 Homeodomain-like domain 58 129 5.2E-8 T 14-10-2018 C3Y93_05790 6d17121ac0906d56d021d0808ae9b537 151 SUPERFAMILY SSF46689 20 133 2.15E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_02005 6d17121ac0906d56d021d0808ae9b537 151 Pfam PF13565 Homeodomain-like domain 58 129 5.2E-8 T 14-10-2018 C3Y93_02005 6d17121ac0906d56d021d0808ae9b537 151 SUPERFAMILY SSF46689 20 133 2.15E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_00735 c4eeafa393f74d36aa71cfb8aa8d9de9 330 SMART SM00729 43 252 2.3E-40 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3Y93_00735 c4eeafa393f74d36aa71cfb8aa8d9de9 330 SMART SM00876 220 312 2.4E-42 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3Y93_00735 c4eeafa393f74d36aa71cfb8aa8d9de9 330 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 7.0E-19 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3Y93_00735 c4eeafa393f74d36aa71cfb8aa8d9de9 330 SUPERFAMILY SSF102114 5 312 2.22E-90 T 14-10-2018 C3Y93_00735 c4eeafa393f74d36aa71cfb8aa8d9de9 330 Hamap MF_01694 Biotin synthase [bioB]. 5 313 42.661 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3Y93_00735 c4eeafa393f74d36aa71cfb8aa8d9de9 330 PIRSF PIRSF001619 1 318 1.8E-138 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3Y93_00735 c4eeafa393f74d36aa71cfb8aa8d9de9 330 Pfam PF04055 Radical SAM superfamily 50 201 1.6E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3Y93_00735 c4eeafa393f74d36aa71cfb8aa8d9de9 330 Gene3D G3DSA:3.20.20.70 4 315 3.3E-130 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_00735 c4eeafa393f74d36aa71cfb8aa8d9de9 330 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 4.5E-123 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3Y93_14040 78e04f831fc4a785e080700f3e2803ee 356 SUPERFAMILY SSF56042 176 342 4.93E-62 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3Y93_14040 78e04f831fc4a785e080700f3e2803ee 356 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 354 46.745 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3Y93_14040 78e04f831fc4a785e080700f3e2803ee 356 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 339 3.4E-144 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C3Y93_14040 78e04f831fc4a785e080700f3e2803ee 356 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 169 2.2E-15 T 14-10-2018 IPR016188 PurM-like, N-terminal domain C3Y93_14040 78e04f831fc4a785e080700f3e2803ee 356 SUPERFAMILY SSF55326 12 175 3.89E-52 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3Y93_14040 78e04f831fc4a785e080700f3e2803ee 356 Gene3D G3DSA:3.90.650.10 176 347 3.8E-69 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3Y93_14040 78e04f831fc4a785e080700f3e2803ee 356 Gene3D G3DSA:3.30.1330.10 11 175 4.0E-67 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3Y93_14040 78e04f831fc4a785e080700f3e2803ee 356 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 342 4.3E-37 T 14-10-2018 IPR010918 PurM-like, C-terminal domain C3Y93_13190 85d8495ab80318ceebdf5b209de033e3 659 Gene3D G3DSA:3.90.580.10 1 101 1.0E-37 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 C3Y93_13190 85d8495ab80318ceebdf5b209de033e3 659 Pfam PF01807 CHC2 zinc finger 4 99 1.1E-39 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 C3Y93_13190 85d8495ab80318ceebdf5b209de033e3 659 Hamap MF_00974 DNA primase [dnaG]. 2 658 26.478 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 C3Y93_13190 85d8495ab80318ceebdf5b209de033e3 659 PIRSF PIRSF002811 182 654 1.8E-84 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 C3Y93_13190 85d8495ab80318ceebdf5b209de033e3 659 PIRSF PIRSF002811 1 133 1.4E-43 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 C3Y93_13190 85d8495ab80318ceebdf5b209de033e3 659 Gene3D G3DSA:3.40.1360.10 320 443 8.2E-38 T 14-10-2018 C3Y93_13190 85d8495ab80318ceebdf5b209de033e3 659 SUPERFAMILY SSF57783 1 98 1.16E-34 T 14-10-2018 C3Y93_13190 85d8495ab80318ceebdf5b209de033e3 659 SMART SM00400 34 88 5.9E-32 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 C3Y93_13190 85d8495ab80318ceebdf5b209de033e3 659 Pfam PF08275 DNA primase catalytic core, N-terminal domain 209 329 1.6E-35 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal C3Y93_13190 85d8495ab80318ceebdf5b209de033e3 659 SUPERFAMILY SSF56731 199 498 1.7E-92 T 14-10-2018 C3Y93_13190 85d8495ab80318ceebdf5b209de033e3 659 Pfam PF13662 Toprim domain 341 404 7.7E-16 T 14-10-2018 IPR006171 TOPRIM domain C3Y93_13190 85d8495ab80318ceebdf5b209de033e3 659 SMART SM00493 337 407 7.2E-13 T 14-10-2018 IPR006171 TOPRIM domain C3Y93_13190 85d8495ab80318ceebdf5b209de033e3 659 Gene3D G3DSA:3.90.980.10 198 319 2.4E-35 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily C3Y93_13190 85d8495ab80318ceebdf5b209de033e3 659 Pfam PF10410 DnaB-helicase binding domain of primase 446 500 1.3E-5 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 C3Y93_08140 c077f3472f33c0a5c054bb437eb79aa8 162 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.8E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_08140 c077f3472f33c0a5c054bb437eb79aa8 162 Gene3D G3DSA:3.30.700.10 7 157 1.4E-14 T 14-10-2018 C3Y93_08140 c077f3472f33c0a5c054bb437eb79aa8 162 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 4.7E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_08140 c077f3472f33c0a5c054bb437eb79aa8 162 SUPERFAMILY SSF54523 7 143 2.9E-14 T 14-10-2018 C3Y93_07140 90d236ba382824bcc7b5c3a802e01568 149 ProSitePatterns PS00550 Hemerythrin family signature. 54 77 - T 14-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 C3Y93_07140 90d236ba382824bcc7b5c3a802e01568 149 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 2 122 1.3E-35 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 C3Y93_07140 90d236ba382824bcc7b5c3a802e01568 149 Pfam PF01814 Hemerythrin HHE cation binding domain 10 123 1.8E-12 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 C3Y93_07140 90d236ba382824bcc7b5c3a802e01568 149 SUPERFAMILY SSF47188 2 122 5.76E-31 T 14-10-2018 IPR035938 Hemerythrin-like superfamily C3Y93_07140 90d236ba382824bcc7b5c3a802e01568 149 Gene3D G3DSA:1.20.120.50 1 125 2.4E-35 T 14-10-2018 IPR035938 Hemerythrin-like superfamily C3Y93_05225 dfd240bfe06e40a16e0f50add8d7eb88 295 SUPERFAMILY SSF53474 34 268 1.36E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_05225 dfd240bfe06e40a16e0f50add8d7eb88 295 Gene3D G3DSA:3.40.50.1820 2 276 1.4E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_05225 dfd240bfe06e40a16e0f50add8d7eb88 295 Pfam PF07859 alpha/beta hydrolase fold 76 156 6.3E-16 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 C3Y93_02520 5289c775903a3bb040e6c21661046f95 507 Gene3D G3DSA:3.30.870.10 49 224 4.9E-39 T 14-10-2018 C3Y93_02520 5289c775903a3bb040e6c21661046f95 507 Pfam PF13091 PLD-like domain 300 451 7.3E-17 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C3Y93_02520 5289c775903a3bb040e6c21661046f95 507 Pfam PF13091 PLD-like domain 65 190 1.6E-17 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C3Y93_02520 5289c775903a3bb040e6c21661046f95 507 SUPERFAMILY SSF56024 51 222 2.04E-39 T 14-10-2018 C3Y93_02520 5289c775903a3bb040e6c21661046f95 507 Gene3D G3DSA:3.30.870.10 247 463 3.7E-35 T 14-10-2018 C3Y93_02520 5289c775903a3bb040e6c21661046f95 507 SMART SM00155 153 180 0.0015 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 C3Y93_02520 5289c775903a3bb040e6c21661046f95 507 SMART SM00155 398 424 0.0037 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 C3Y93_02520 5289c775903a3bb040e6c21661046f95 507 SUPERFAMILY SSF56024 266 469 9.2E-30 T 14-10-2018 C3Y93_09840 d72f5f20de7e786c0a1939f841f5235c 93 SUPERFAMILY SSF55729 3 92 7.8E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3Y93_09840 d72f5f20de7e786c0a1939f841f5235c 93 Gene3D G3DSA:3.40.630.30 1 93 1.4E-24 T 14-10-2018 C3Y93_09840 d72f5f20de7e786c0a1939f841f5235c 93 Pfam PF14542 GCN5-related N-acetyl-transferase 14 91 8.9E-22 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase C3Y93_00740 8ce35ff89556b20052baf849e3795063 228 Gene3D G3DSA:3.40.50.150 5 228 1.3E-39 T 14-10-2018 C3Y93_00740 8ce35ff89556b20052baf849e3795063 228 Pfam PF13649 Methyltransferase domain 46 146 5.0E-16 T 14-10-2018 C3Y93_00740 8ce35ff89556b20052baf849e3795063 228 SUPERFAMILY SSF53335 11 227 9.21E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_07100 ac2733fe77bab87f509bcb95c4d42112 338 PIRSF PIRSF000116 2 204 2.0E-52 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C3Y93_07100 ac2733fe77bab87f509bcb95c4d42112 338 PIRSF PIRSF000116 201 333 1.6E-13 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C3Y93_07100 ac2733fe77bab87f509bcb95c4d42112 338 Gene3D G3DSA:3.40.50.720 1 181 2.3E-78 T 14-10-2018 C3Y93_07100 ac2733fe77bab87f509bcb95c4d42112 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 44.633 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C3Y93_07100 ac2733fe77bab87f509bcb95c4d42112 338 SUPERFAMILY SSF48179 183 332 1.14E-65 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3Y93_07100 ac2733fe77bab87f509bcb95c4d42112 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 2.1E-59 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C3Y93_07100 ac2733fe77bab87f509bcb95c4d42112 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 6.8E-131 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C3Y93_07100 ac2733fe77bab87f509bcb95c4d42112 338 Gene3D G3DSA:1.10.3730.40 182 338 3.1E-71 T 14-10-2018 C3Y93_07100 ac2733fe77bab87f509bcb95c4d42112 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 7.5E-75 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C3Y93_07100 ac2733fe77bab87f509bcb95c4d42112 338 SUPERFAMILY SSF51735 1 182 4.59E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_10465 ab2d2e06923dbf07a33c15125f1a5021 183 Gene3D G3DSA:2.40.50.140 1 125 2.4E-44 T 14-10-2018 C3Y93_10465 ab2d2e06923dbf07a33c15125f1a5021 183 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 183 1.3E-53 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 C3Y93_10465 ab2d2e06923dbf07a33c15125f1a5021 183 Pfam PF00436 Single-strand binding protein family 4 108 3.0E-39 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 C3Y93_10465 ab2d2e06923dbf07a33c15125f1a5021 183 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 35.331 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 C3Y93_10465 ab2d2e06923dbf07a33c15125f1a5021 183 SUPERFAMILY SSF50249 2 183 1.75E-55 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_07760 ca7fe5d3d9db2dd14f1b1512453c7652 250 SUPERFAMILY SSF54814 2 106 1.49E-35 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 C3Y93_07760 ca7fe5d3d9db2dd14f1b1512453c7652 250 Gene3D G3DSA:3.30.1140.32 108 208 1.3E-44 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07760 ca7fe5d3d9db2dd14f1b1512453c7652 250 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.0E-94 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 C3Y93_07760 ca7fe5d3d9db2dd14f1b1512453c7652 250 Gene3D G3DSA:3.30.300.20 18 107 4.6E-26 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3Y93_07760 ca7fe5d3d9db2dd14f1b1512453c7652 250 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.1E-40 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07760 ca7fe5d3d9db2dd14f1b1512453c7652 250 SUPERFAMILY SSF54821 108 206 7.72E-40 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07760 ca7fe5d3d9db2dd14f1b1512453c7652 250 SMART SM00322 60 125 5.9E-6 T 14-10-2018 IPR004087 K Homology domain GO:0003676 C3Y93_07760 ca7fe5d3d9db2dd14f1b1512453c7652 250 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07760 ca7fe5d3d9db2dd14f1b1512453c7652 250 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.175 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 C3Y93_07760 ca7fe5d3d9db2dd14f1b1512453c7652 250 Pfam PF07650 KH domain 39 110 7.2E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_02710 b1d44ed3c62980a79deb66222d81abfb 389 SUPERFAMILY SSF53901 3 266 4.65E-82 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_02710 b1d44ed3c62980a79deb66222d81abfb 389 Gene3D G3DSA:3.40.47.10 4 272 1.3E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_02710 b1d44ed3c62980a79deb66222d81abfb 389 Pfam PF02803 Thiolase, C-terminal domain 266 387 9.9E-45 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 C3Y93_02710 b1d44ed3c62980a79deb66222d81abfb 389 Gene3D G3DSA:3.40.47.10 124 385 1.3E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_02710 b1d44ed3c62980a79deb66222d81abfb 389 ProSitePatterns PS00099 Thiolases active site. 370 383 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 C3Y93_02710 b1d44ed3c62980a79deb66222d81abfb 389 SUPERFAMILY SSF53901 267 388 9.05E-40 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_02710 b1d44ed3c62980a79deb66222d81abfb 389 Pfam PF00108 Thiolase, N-terminal domain 2 257 8.8E-90 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 C3Y93_02710 b1d44ed3c62980a79deb66222d81abfb 389 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 82 100 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 C3Y93_02710 b1d44ed3c62980a79deb66222d81abfb 389 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 4 387 7.2E-135 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3Y93_02710 b1d44ed3c62980a79deb66222d81abfb 389 PIRSF PIRSF000429 1 389 8.0E-118 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3Y93_01620 43e8af3ff3e34e75b62895cc6bf85c5b 173 Gene3D G3DSA:2.30.30.100 1 69 1.4E-31 T 14-10-2018 C3Y93_01620 43e8af3ff3e34e75b62895cc6bf85c5b 173 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.6 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 C3Y93_01620 43e8af3ff3e34e75b62895cc6bf85c5b 173 Pfam PF17209 Hfq protein 7 68 9.5E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 C3Y93_01620 43e8af3ff3e34e75b62895cc6bf85c5b 173 SUPERFAMILY SSF50182 7 67 3.27E-23 T 14-10-2018 IPR010920 LSM domain superfamily C3Y93_01620 43e8af3ff3e34e75b62895cc6bf85c5b 173 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.1E-29 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 SMART SM00838 407 492 0.0021 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 SUPERFAMILY SSF52540 5 230 1.92E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 TIGRFAM TIGR01393 lepA: elongation factor 4 11 604 1.4E-289 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 SUPERFAMILY SSF54980 301 379 1.22E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 SUPERFAMILY SSF54980 408 502 1.34E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 Hamap MF_00071 Elongation factor 4 [lepA]. 1 605 291.707 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 183 3.5E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 Gene3D G3DSA:3.30.70.3380 377 487 3.0E-39 T 14-10-2018 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 Pfam PF00009 Elongation factor Tu GTP binding domain 11 190 3.9E-52 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 Gene3D G3DSA:3.40.50.300 8 194 6.5E-70 T 14-10-2018 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 Pfam PF06421 GTP-binding protein LepA C-terminus 496 602 1.0E-49 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 Pfam PF03144 Elongation factor Tu domain 2 214 284 1.4E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 Pfam PF00679 Elongation factor G C-terminus 408 493 7.0E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 PRINTS PR00315 GTP-binding elongation factor signature 15 28 5.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 PRINTS PR00315 GTP-binding elongation factor signature 99 110 5.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 PRINTS PR00315 GTP-binding elongation factor signature 135 144 5.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 PRINTS PR00315 GTP-binding elongation factor signature 83 93 5.3E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 Gene3D G3DSA:2.40.30.10 195 294 4.1E-31 T 14-10-2018 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 Gene3D G3DSA:3.30.70.870 295 376 6.7E-34 T 14-10-2018 C3Y93_00230 c9a7f2837e14036e0e25c2275bebd858 605 Gene3D G3DSA:3.30.70.2570 488 562 1.4E-32 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily C3Y93_00265 ea3221438f23e4aa7d92d0e47fe8d295 241 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 241 127.469 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 C3Y93_00265 ea3221438f23e4aa7d92d0e47fe8d295 241 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 5 237 1.2E-101 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 C3Y93_00265 ea3221438f23e4aa7d92d0e47fe8d295 241 SUPERFAMILY SSF63892 2 239 5.23E-98 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 C3Y93_00265 ea3221438f23e4aa7d92d0e47fe8d295 241 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 5 237 9.8E-96 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 C3Y93_00265 ea3221438f23e4aa7d92d0e47fe8d295 241 Gene3D G3DSA:3.20.20.70 1 241 1.7E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_08290 9dd8349a98e3998e20adec5f59fec2e7 352 Gene3D G3DSA:3.30.420.40 188 315 5.5E-85 T 14-10-2018 C3Y93_08290 9dd8349a98e3998e20adec5f59fec2e7 352 SUPERFAMILY SSF53067 193 350 6.29E-26 T 14-10-2018 C3Y93_08290 9dd8349a98e3998e20adec5f59fec2e7 352 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 12 351 2.2E-113 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM C3Y93_08290 9dd8349a98e3998e20adec5f59fec2e7 352 SUPERFAMILY SSF53067 12 174 3.37E-11 T 14-10-2018 C3Y93_08290 9dd8349a98e3998e20adec5f59fec2e7 352 Gene3D G3DSA:3.30.420.40 13 349 5.5E-85 T 14-10-2018 C3Y93_08290 9dd8349a98e3998e20adec5f59fec2e7 352 Gene3D G3DSA:3.30.1490.300 88 147 5.5E-85 T 14-10-2018 C3Y93_08290 9dd8349a98e3998e20adec5f59fec2e7 352 Pfam PF11104 Type IV pilus assembly protein PilM; 14 351 1.7E-134 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM C3Y93_08290 9dd8349a98e3998e20adec5f59fec2e7 352 PIRSF PIRSF019169 2 352 2.4E-121 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM C3Y93_12005 3d7f65641cda17807ca3ac8b42197105 662 Gene3D G3DSA:3.40.50.300 284 608 1.2E-66 T 14-10-2018 C3Y93_12005 3d7f65641cda17807ca3ac8b42197105 662 Gene3D G3DSA:3.40.50.300 10 273 8.2E-71 T 14-10-2018 C3Y93_12005 3d7f65641cda17807ca3ac8b42197105 662 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 273 2.3E-54 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 C3Y93_12005 3d7f65641cda17807ca3ac8b42197105 662 Gene3D G3DSA:1.10.10.160 109 193 8.2E-71 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily C3Y93_12005 3d7f65641cda17807ca3ac8b42197105 662 Pfam PF13361 UvrD-like helicase C-terminal domain 281 600 5.3E-42 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C3Y93_12005 3d7f65641cda17807ca3ac8b42197105 662 SUPERFAMILY SSF52540 6 603 1.12E-123 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_12005 3d7f65641cda17807ca3ac8b42197105 662 Gene3D G3DSA:1.10.486.10 386 525 1.2E-66 T 14-10-2018 C3Y93_02670 3270377fc445d31ad7c11531ac441ed2 163 TIGRFAM TIGR03232 benzo_1_2_benB: benzoate 1,2-dioxygenase, small subunit 9 163 9.0E-91 T 14-10-2018 IPR017641 Benzoate 1,2-dioxygenase, small subunit GO:0055114 C3Y93_02670 3270377fc445d31ad7c11531ac441ed2 163 SUPERFAMILY SSF54427 1 163 8.77E-55 T 14-10-2018 IPR032710 NTF2-like domain superfamily C3Y93_02670 3270377fc445d31ad7c11531ac441ed2 163 Pfam PF00866 Ring hydroxylating beta subunit 15 155 6.1E-48 T 14-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 C3Y93_02670 3270377fc445d31ad7c11531ac441ed2 163 Gene3D G3DSA:3.10.450.50 1 163 2.0E-47 T 14-10-2018 C3Y93_12925 e0e27d674008f91782290cadee93cc34 161 Pfam PF01957 NfeD-like C-terminal, partner-binding 9 149 1.4E-13 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain C3Y93_12925 e0e27d674008f91782290cadee93cc34 161 SUPERFAMILY SSF141322 81 149 2.35E-5 T 14-10-2018 C3Y93_12925 e0e27d674008f91782290cadee93cc34 161 Gene3D G3DSA:2.40.50.140 77 158 1.1E-8 T 14-10-2018 C3Y93_05220 0c9a7d9d502d92e4c5926d19df42cec9 257 Gene3D G3DSA:3.90.79.10 120 249 2.1E-38 T 14-10-2018 C3Y93_05220 0c9a7d9d502d92e4c5926d19df42cec9 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 87 118 5.3E-12 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 C3Y93_05220 0c9a7d9d502d92e4c5926d19df42cec9 257 SUPERFAMILY SSF55811 72 239 7.6E-45 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3Y93_05220 0c9a7d9d502d92e4c5926d19df42cec9 257 ProSitePatterns PS00893 Nudix box signature. 154 175 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C3Y93_05220 0c9a7d9d502d92e4c5926d19df42cec9 257 Gene3D G3DSA:3.90.79.20 3 119 1.6E-20 T 14-10-2018 C3Y93_05220 0c9a7d9d502d92e4c5926d19df42cec9 257 Pfam PF00293 NUDIX domain 124 230 4.8E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3Y93_04470 06312256f554cc5baa1c2fea2191cb67 133 Pfam PF13411 MerR HTH family regulatory protein 4 71 1.0E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_04470 06312256f554cc5baa1c2fea2191cb67 133 SMART SM00422 4 73 6.7E-28 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_04470 06312256f554cc5baa1c2fea2191cb67 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 2.0E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_04470 06312256f554cc5baa1c2fea2191cb67 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 2.0E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_04470 06312256f554cc5baa1c2fea2191cb67 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 2.0E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_04470 06312256f554cc5baa1c2fea2191cb67 133 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 6 130 6.9E-46 T 14-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 C3Y93_04470 06312256f554cc5baa1c2fea2191cb67 133 SUPERFAMILY SSF46955 4 127 4.03E-34 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3Y93_04470 06312256f554cc5baa1c2fea2191cb67 133 Gene3D G3DSA:1.10.1660.10 1 129 1.5E-33 T 14-10-2018 C3Y93_06075 0037362b209527141f37f4ed38d988fd 383 Gene3D G3DSA:1.10.287.470 97 188 2.7E-56 T 14-10-2018 C3Y93_06075 0037362b209527141f37f4ed38d988fd 383 Gene3D G3DSA:2.40.50.100 63 223 2.7E-56 T 14-10-2018 C3Y93_06075 0037362b209527141f37f4ed38d988fd 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 282 1.6E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3Y93_06075 0037362b209527141f37f4ed38d988fd 383 Gene3D G3DSA:2.40.420.20 48 359 2.7E-56 T 14-10-2018 C3Y93_06075 0037362b209527141f37f4ed38d988fd 383 SUPERFAMILY SSF111369 58 288 2.09E-14 T 14-10-2018 C3Y93_06075 0037362b209527141f37f4ed38d988fd 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 361 1.3E-40 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3Y93_06075 0037362b209527141f37f4ed38d988fd 383 Gene3D G3DSA:2.40.30.170 52 300 2.7E-56 T 14-10-2018 C3Y93_05305 f2ef6eade6dde830535c48e755bebf51 164 Pfam PF01613 Flavin reductase like domain 12 159 1.6E-36 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 C3Y93_05305 f2ef6eade6dde830535c48e755bebf51 164 Gene3D G3DSA:2.30.110.10 1 162 8.3E-49 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 C3Y93_05305 f2ef6eade6dde830535c48e755bebf51 164 SMART SM00903 11 157 7.1E-53 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 C3Y93_05305 f2ef6eade6dde830535c48e755bebf51 164 SUPERFAMILY SSF50475 6 160 3.39E-50 T 14-10-2018 C3Y93_00115 4d74569791741b8676aa54db6c8f3d4b 266 SUPERFAMILY SSF52096 10 264 8.96E-62 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_00115 4d74569791741b8676aa54db6c8f3d4b 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 264 2.3E-40 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3Y93_00115 4d74569791741b8676aa54db6c8f3d4b 266 Gene3D G3DSA:1.10.12.10 210 255 4.4E-24 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal C3Y93_00115 4d74569791741b8676aa54db6c8f3d4b 266 Gene3D G3DSA:3.90.226.10 10 191 2.0E-53 T 14-10-2018 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 1.6E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 1.6E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 1.6E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 1.6E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 1.6E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 SUPERFAMILY SSF53850 2 215 3.16E-85 T 14-10-2018 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 5.7E-116 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 Gene3D G3DSA:3.40.190.10 101 200 1.9E-85 T 14-10-2018 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 225 293 5.5E-19 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 Gene3D G3DSA:3.40.190.10 4 208 1.9E-85 T 14-10-2018 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 PIRSF PIRSF001438 1 306 1.1E-122 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 Gene3D G3DSA:3.30.160.40 219 304 2.8E-28 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 SUPERFAMILY SSF54782 219 305 2.22E-25 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 38.654 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_11015 2ef1e84612edbf18e8d99487bea6b44a 306 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 4.4E-80 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C3Y93_10270 14b2bbe0bffb786a19bba4cc67d19b48 422 Gene3D G3DSA:1.20.5.100 190 217 3.7E-10 T 14-10-2018 C3Y93_10270 14b2bbe0bffb786a19bba4cc67d19b48 422 PIRSF PIRSF000124 1 422 2.2E-113 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 C3Y93_10270 14b2bbe0bffb786a19bba4cc67d19b48 422 SUPERFAMILY SSF52413 288 417 2.88E-30 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 C3Y93_10270 14b2bbe0bffb786a19bba4cc67d19b48 422 SUPERFAMILY SSF51735 2 191 1.59E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_10270 14b2bbe0bffb786a19bba4cc67d19b48 422 SUPERFAMILY SSF48179 188 284 7.82E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3Y93_10270 14b2bbe0bffb786a19bba4cc67d19b48 422 Gene3D G3DSA:3.40.50.720 218 422 1.3E-60 T 14-10-2018 C3Y93_10270 14b2bbe0bffb786a19bba4cc67d19b48 422 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 2 403 2.7E-62 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 C3Y93_10270 14b2bbe0bffb786a19bba4cc67d19b48 422 SMART SM00984 303 407 1.2E-31 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3Y93_10270 14b2bbe0bffb786a19bba4cc67d19b48 422 Gene3D G3DSA:3.40.50.720 1 189 1.2E-19 T 14-10-2018 C3Y93_10270 14b2bbe0bffb786a19bba4cc67d19b48 422 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2 170 6.3E-7 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3Y93_10270 14b2bbe0bffb786a19bba4cc67d19b48 422 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 303 407 1.1E-23 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3Y93_10270 14b2bbe0bffb786a19bba4cc67d19b48 422 PIRSF PIRSF500134 1 422 1.8E-116 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 C3Y93_10270 14b2bbe0bffb786a19bba4cc67d19b48 422 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 189 279 1.3E-25 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3Y93_00215 a9df7a365b6b042313573f39f205cf9e 542 SUPERFAMILY SSF56425 235 350 3.74E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_00215 a9df7a365b6b042313573f39f205cf9e 542 Gene3D G3DSA:1.20.58.100 422 537 1.0E-42 T 14-10-2018 C3Y93_00215 a9df7a365b6b042313573f39f205cf9e 542 Gene3D G3DSA:3.90.700.10 245 355 1.3E-148 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_00215 a9df7a365b6b042313573f39f205cf9e 542 Pfam PF00890 FAD binding domain 11 389 8.9E-92 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_00215 a9df7a365b6b042313573f39f205cf9e 542 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 8 517 5.1E-190 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 C3Y93_00215 a9df7a365b6b042313573f39f205cf9e 542 Gene3D G3DSA:3.50.50.60 11 401 1.3E-148 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_00215 a9df7a365b6b042313573f39f205cf9e 542 PIRSF PIRSF000171 2 288 8.3E-19 T 14-10-2018 C3Y93_00215 a9df7a365b6b042313573f39f205cf9e 542 PIRSF PIRSF000171 334 532 7.9E-15 T 14-10-2018 C3Y93_00215 a9df7a365b6b042313573f39f205cf9e 542 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 352 374 1.7E-8 T 14-10-2018 C3Y93_00215 a9df7a365b6b042313573f39f205cf9e 542 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 1.7E-8 T 14-10-2018 C3Y93_00215 a9df7a365b6b042313573f39f205cf9e 542 Pfam PF02910 Fumarate reductase flavoprotein C-term 438 518 6.6E-14 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_00215 a9df7a365b6b042313573f39f205cf9e 542 SUPERFAMILY SSF46977 423 525 7.33E-32 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_00215 a9df7a365b6b042313573f39f205cf9e 542 SUPERFAMILY SSF51905 2 444 9.18E-67 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_00670 f793f2f6d9cfd6f6efb2c63a599254ba 411 Gene3D G3DSA:3.20.20.140 53 364 2.5E-78 T 14-10-2018 C3Y93_00670 f793f2f6d9cfd6f6efb2c63a599254ba 411 Gene3D G3DSA:2.30.40.10 10 409 2.5E-78 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C3Y93_00670 f793f2f6d9cfd6f6efb2c63a599254ba 411 SUPERFAMILY SSF51556 53 363 4.08E-68 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3Y93_00670 f793f2f6d9cfd6f6efb2c63a599254ba 411 SUPERFAMILY SSF51338 5 409 3.6E-10 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C3Y93_01000 57c46c50307ec5a4b53d0fd08428e4fb 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 6.0E-160 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 C3Y93_01000 57c46c50307ec5a4b53d0fd08428e4fb 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.4E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_01000 57c46c50307ec5a4b53d0fd08428e4fb 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.4E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_01000 57c46c50307ec5a4b53d0fd08428e4fb 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_01000 57c46c50307ec5a4b53d0fd08428e4fb 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_01000 57c46c50307ec5a4b53d0fd08428e4fb 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.113 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 C3Y93_01000 57c46c50307ec5a4b53d0fd08428e4fb 363 Gene3D G3DSA:3.10.20.30 48 361 6.6E-153 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3Y93_01000 57c46c50307ec5a4b53d0fd08428e4fb 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 3.3E-40 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 C3Y93_01000 57c46c50307ec5a4b53d0fd08428e4fb 363 SUPERFAMILY SSF81271 279 360 4.58E-37 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 C3Y93_01000 57c46c50307ec5a4b53d0fd08428e4fb 363 Gene3D G3DSA:3.40.50.300 4 278 6.6E-153 T 14-10-2018 C3Y93_01000 57c46c50307ec5a4b53d0fd08428e4fb 363 PIRSF PIRSF006641 1 363 9.5E-157 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 C3Y93_01000 57c46c50307ec5a4b53d0fd08428e4fb 363 SUPERFAMILY SSF52540 3 301 1.3E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01000 57c46c50307ec5a4b53d0fd08428e4fb 363 Pfam PF01926 50S ribosome-binding GTPase 5 127 8.9E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_01000 57c46c50307ec5a4b53d0fd08428e4fb 363 Gene3D G3DSA:1.10.150.300 113 200 6.6E-153 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 C3Y93_01295 ebe1a4e91ad06642fae6d2dba2955275 328 PRINTS PR00075 Fatty acid desaturase family 1 signature 30 50 2.9E-28 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 C3Y93_01295 ebe1a4e91ad06642fae6d2dba2955275 328 PRINTS PR00075 Fatty acid desaturase family 1 signature 75 95 2.9E-28 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 C3Y93_01295 ebe1a4e91ad06642fae6d2dba2955275 328 PRINTS PR00075 Fatty acid desaturase family 1 signature 207 228 2.9E-28 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 C3Y93_01295 ebe1a4e91ad06642fae6d2dba2955275 328 PRINTS PR00075 Fatty acid desaturase family 1 signature 112 141 2.9E-28 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 C3Y93_01295 ebe1a4e91ad06642fae6d2dba2955275 328 PRINTS PR00075 Fatty acid desaturase family 1 signature 250 264 2.9E-28 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 C3Y93_01295 ebe1a4e91ad06642fae6d2dba2955275 328 Pfam PF00487 Fatty acid desaturase 52 273 3.5E-18 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 SUPERFAMILY SSF82693 677 865 2.04E-24 T 14-10-2018 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 SUPERFAMILY SSF82693 38 131 5.93E-29 T 14-10-2018 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 SUPERFAMILY SSF82714 182 272 9.16E-24 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_12995 0b7700344267bab79d596664301ac386 1059 Gene3D G3DSA:3.30.70.1430 38 822 0.0 T 14-10-2018 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 Pfam PF00873 AcrB/AcrD/AcrF family 1 1041 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 SUPERFAMILY SSF82714 727 814 1.19E-22 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_12995 0b7700344267bab79d596664301ac386 1059 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1056 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 SUPERFAMILY SSF82693 135 330 4.36E-24 T 14-10-2018 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 Gene3D G3DSA:1.20.1640.10 517 1038 0.0 T 14-10-2018 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_12995 0b7700344267bab79d596664301ac386 1059 Gene3D G3DSA:3.30.70.1440 674 874 0.0 T 14-10-2018 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 Gene3D G3DSA:3.30.70.1430 571 673 0.0 T 14-10-2018 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 SUPERFAMILY SSF82866 836 1041 2.62E-43 T 14-10-2018 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.2E-109 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 PRINTS PR00702 Acriflavin resistance protein family signature 625 639 1.2E-109 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 1.2E-109 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.2E-109 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.2E-109 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.2E-109 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.2E-109 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.2E-109 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.2E-109 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 SUPERFAMILY SSF82866 296 497 1.16E-47 T 14-10-2018 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 14-10-2018 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 Gene3D G3DSA:1.20.1640.10 8 516 0.0 T 14-10-2018 C3Y93_12995 0b7700344267bab79d596664301ac386 1059 Gene3D G3DSA:3.30.2090.10 726 814 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C3Y93_12995 0b7700344267bab79d596664301ac386 1059 SUPERFAMILY SSF82693 569 667 1.26E-25 T 14-10-2018 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 863 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 Gene3D G3DSA:3.30.499.10 691 874 1.3E-67 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 Gene3D G3DSA:3.20.19.10 162 363 6.5E-71 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 ProSitePatterns PS00450 Aconitase family signature 1. 710 727 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 SUPERFAMILY SSF52016 162 374 2.75E-63 T 14-10-2018 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 SUPERFAMILY SSF74778 2 159 5.36E-67 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 Pfam PF00330 Aconitase family (aconitate hydratase) 477 827 4.7E-39 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 ProSitePatterns PS01244 Aconitase family signature 2. 770 783 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 Gene3D G3DSA:3.30.499.10 407 534 2.2E-145 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 Gene3D G3DSA:3.40.1060.10 387 689 2.2E-145 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 PIRSF PIRSF036687 1 868 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 Pfam PF11791 Aconitate B N-terminal domain 4 156 2.2E-65 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 384 3.8E-90 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 SUPERFAMILY SSF53732 381 865 1.03E-143 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 C3Y93_03665 90d72589e4bbac9b7cd7e8b73a54c45f 879 Gene3D G3DSA:1.25.40.310 1 160 6.0E-66 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 C3Y93_12325 7ddd5d7792747888d58f192d7826b902 185 SMART SM00479 8 181 4.5E-20 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3Y93_12325 7ddd5d7792747888d58f192d7826b902 185 Pfam PF00929 Exonuclease 10 171 5.3E-32 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3Y93_12325 7ddd5d7792747888d58f192d7826b902 185 Gene3D G3DSA:3.30.420.10 1 185 1.9E-75 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_12325 7ddd5d7792747888d58f192d7826b902 185 SUPERFAMILY SSF53098 5 181 2.87E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_12325 7ddd5d7792747888d58f192d7826b902 185 Hamap MF_00045 Oligoribonuclease [orn]. 4 182 43.629 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 C3Y93_12810 e2474e2f29195e9b29e9a743f290dbb6 385 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 C3Y93_12810 e2474e2f29195e9b29e9a743f290dbb6 385 Gene3D G3DSA:3.40.640.10 56 292 2.6E-114 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_12810 e2474e2f29195e9b29e9a743f290dbb6 385 Gene3D G3DSA:3.90.1150.10 40 382 2.6E-114 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_12810 e2474e2f29195e9b29e9a743f290dbb6 385 SUPERFAMILY SSF53383 4 385 4.49E-87 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_12810 e2474e2f29195e9b29e9a743f290dbb6 385 Pfam PF00155 Aminotransferase class I and II 39 383 3.2E-55 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3Y93_10725 adea72b9a9849e0621ebc0157d1dc937 463 Gene3D G3DSA:1.20.1250.20 256 461 1.4E-16 T 14-10-2018 C3Y93_10725 adea72b9a9849e0621ebc0157d1dc937 463 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 421 1.0E-76 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 C3Y93_10725 adea72b9a9849e0621ebc0157d1dc937 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 7.6E-9 T 14-10-2018 C3Y93_10725 adea72b9a9849e0621ebc0157d1dc937 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 7.6E-9 T 14-10-2018 C3Y93_10725 adea72b9a9849e0621ebc0157d1dc937 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 7.6E-9 T 14-10-2018 C3Y93_10725 adea72b9a9849e0621ebc0157d1dc937 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 7.6E-9 T 14-10-2018 C3Y93_10725 adea72b9a9849e0621ebc0157d1dc937 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 206 224 7.6E-9 T 14-10-2018 C3Y93_10725 adea72b9a9849e0621ebc0157d1dc937 463 Pfam PF07690 Major Facilitator Superfamily 22 412 2.2E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_10725 adea72b9a9849e0621ebc0157d1dc937 463 SUPERFAMILY SSF103473 7 461 4.32E-64 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_10725 adea72b9a9849e0621ebc0157d1dc937 463 Gene3D G3DSA:1.20.1720.10 16 221 2.1E-44 T 14-10-2018 C3Y93_07925 890e8880b3184e0d6f646649260389d5 457 SUPERFAMILY SSF102114 4 441 3.53E-117 T 14-10-2018 C3Y93_07925 890e8880b3184e0d6f646649260389d5 457 PIRSF PIRSF000167 2 453 6.9E-141 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 C3Y93_07925 890e8880b3184e0d6f646649260389d5 457 SMART SM00729 54 275 5.3E-38 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3Y93_07925 890e8880b3184e0d6f646649260389d5 457 Gene3D G3DSA:3.80.30.20 1 367 2.6E-104 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C3Y93_07925 890e8880b3184e0d6f646649260389d5 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 457 2.5E-130 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 C3Y93_07925 890e8880b3184e0d6f646649260389d5 457 Gene3D G3DSA:1.10.10.920 368 457 1.7E-16 T 14-10-2018 C3Y93_07925 890e8880b3184e0d6f646649260389d5 457 Pfam PF04055 Radical SAM superfamily 59 230 1.7E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3Y93_03440 6fd09b1573037bc695ce2afc953f38da 233 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 3 228 50.308 T 14-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 C3Y93_03440 6fd09b1573037bc695ce2afc953f38da 233 Pfam PF02146 Sir2 family 9 182 2.3E-48 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 C3Y93_03440 6fd09b1573037bc695ce2afc953f38da 233 Gene3D G3DSA:3.40.50.1220 5 203 9.3E-65 T 14-10-2018 C3Y93_03440 6fd09b1573037bc695ce2afc953f38da 233 SUPERFAMILY SSF52467 2 230 3.27E-68 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C3Y93_03440 6fd09b1573037bc695ce2afc953f38da 233 Gene3D G3DSA:3.30.1600.10 18 154 9.3E-65 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily C3Y93_05345 f4f616c3332b080524e1ddb05981a7ae 570 SUPERFAMILY SSF53649 251 544 7.2E-24 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 C3Y93_05345 f4f616c3332b080524e1ddb05981a7ae 570 Pfam PF00884 Sulfatase 251 543 7.7E-55 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 C3Y93_05345 f4f616c3332b080524e1ddb05981a7ae 570 Gene3D G3DSA:3.40.720.10 234 562 2.3E-89 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 C3Y93_05345 f4f616c3332b080524e1ddb05981a7ae 570 Pfam PF08019 Domain of unknown function (DUF1705) 72 221 4.0E-42 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 C3Y93_00610 0df8c399b9fb3592d295c64cb2af1abb 388 Pfam PF13393 Histidyl-tRNA synthetase 12 319 3.5E-99 T 14-10-2018 C3Y93_00610 0df8c399b9fb3592d295c64cb2af1abb 388 Gene3D G3DSA:3.30.930.10 5 325 2.4E-59 T 14-10-2018 C3Y93_00610 0df8c399b9fb3592d295c64cb2af1abb 388 PIRSF PIRSF001549 6 357 2.0E-35 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 C3Y93_00610 0df8c399b9fb3592d295c64cb2af1abb 388 SUPERFAMILY SSF55681 7 328 1.54E-50 T 14-10-2018 C3Y93_00610 0df8c399b9fb3592d295c64cb2af1abb 388 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 369 25.754 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 C3Y93_00610 0df8c399b9fb3592d295c64cb2af1abb 388 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 15 320 6.8E-82 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 C3Y93_10510 e5ae10e2b33caa8c60a77081c37483cc 537 Gene3D G3DSA:1.10.530.70 347 529 2.2E-14 T 14-10-2018 C3Y93_10510 e5ae10e2b33caa8c60a77081c37483cc 537 Pfam PF00182 Chitinase class I 415 474 7.7E-7 T 14-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 C3Y93_10510 e5ae10e2b33caa8c60a77081c37483cc 537 SUPERFAMILY SSF53955 352 529 4.5E-28 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 Pfam PF00488 MutS domain V 624 808 3.0E-80 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 Gene3D G3DSA:1.10.1420.10 400 516 7.4E-98 T 14-10-2018 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 SUPERFAMILY SSF55271 7 120 2.75E-38 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 SUPERFAMILY SSF52540 580 810 8.35E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 SMART SM00533 293 604 9.9E-97 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 701 717 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 SUPERFAMILY SSF48334 278 578 1.31E-82 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 Gene3D G3DSA:3.40.50.300 582 858 1.6E-95 T 14-10-2018 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 Pfam PF01624 MutS domain I 14 124 5.6E-39 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 13 874 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 SMART SM00534 620 806 2.2E-109 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 Pfam PF05192 MutS domain III 281 572 3.6E-36 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 Gene3D G3DSA:3.30.420.110 134 273 2.1E-36 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 PIRSF PIRSF037677 3 846 4.3E-147 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 Gene3D G3DSA:3.40.1170.10 6 126 1.1E-47 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 Pfam PF05188 MutS domain II 137 264 8.7E-22 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 13 869 23.938 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 SUPERFAMILY SSF53150 119 277 8.24E-38 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 Gene3D G3DSA:1.10.1420.10 277 572 7.4E-98 T 14-10-2018 C3Y93_04110 a9c73e27539f6cbc72e45965f732ecf7 879 Pfam PF05190 MutS family domain IV 441 531 3.0E-31 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 C3Y93_13280 4692dfa1dde1932e7d7e11556a82de7c 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 5.7E-9 T 14-10-2018 C3Y93_13280 4692dfa1dde1932e7d7e11556a82de7c 236 SUPERFAMILY SSF46548 106 232 8.02E-38 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C3Y93_13280 4692dfa1dde1932e7d7e11556a82de7c 236 SUPERFAMILY SSF54292 3 105 4.01E-28 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3Y93_13280 4692dfa1dde1932e7d7e11556a82de7c 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3Y93_13280 4692dfa1dde1932e7d7e11556a82de7c 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 10 228 1.8E-82 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_13280 4692dfa1dde1932e7d7e11556a82de7c 236 Gene3D G3DSA:3.10.20.30 1 105 9.0E-36 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3Y93_13280 4692dfa1dde1932e7d7e11556a82de7c 236 Gene3D G3DSA:1.10.1060.10 106 236 7.4E-56 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C3Y93_13280 4692dfa1dde1932e7d7e11556a82de7c 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 110 1.2E-30 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 304 2.5E-118 T 14-10-2018 IPR017861 Kae1/TsaD family C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 Gene3D G3DSA:3.30.420.40 3 313 1.3E-127 T 14-10-2018 C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 SUPERFAMILY SSF53067 3 121 7.77E-31 T 14-10-2018 C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 Pfam PF00814 Glycoprotease family 25 305 1.4E-103 T 14-10-2018 IPR000905 Gcp-like domain C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 4.4E-50 T 14-10-2018 IPR017861 Kae1/TsaD family C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 4.4E-50 T 14-10-2018 IPR017861 Kae1/TsaD family C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 261 270 4.4E-50 T 14-10-2018 IPR017861 Kae1/TsaD family C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 4.4E-50 T 14-10-2018 IPR017861 Kae1/TsaD family C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 4.4E-50 T 14-10-2018 IPR017861 Kae1/TsaD family C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 4.4E-50 T 14-10-2018 IPR017861 Kae1/TsaD family C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 312 4.8E-134 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 SUPERFAMILY SSF53067 101 307 8.33E-44 T 14-10-2018 C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 Gene3D G3DSA:3.30.420.40 129 291 1.3E-127 T 14-10-2018 C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 C3Y93_00895 450aa36a9a817beb5030b2c1cbca185c 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 329 63.801 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 C3Y93_07830 ff3e6c5b044eab2abc54c7ea39dd25d7 137 SUPERFAMILY SSF54593 4 134 7.12E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3Y93_07830 ff3e6c5b044eab2abc54c7ea39dd25d7 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 130 3.7E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain C3Y93_07830 ff3e6c5b044eab2abc54c7ea39dd25d7 137 Gene3D G3DSA:3.10.180.10 2 137 3.2E-48 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3Y93_10940 05c71b14afb7b22df8b24db2f9451c8a 448 Pfam PF08245 Mur ligase middle domain 110 282 2.1E-26 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C3Y93_10940 05c71b14afb7b22df8b24db2f9451c8a 448 Gene3D G3DSA:3.90.190.20 303 443 6.1E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3Y93_10940 05c71b14afb7b22df8b24db2f9451c8a 448 SUPERFAMILY SSF51984 10 93 1.09E-17 T 14-10-2018 C3Y93_10940 05c71b14afb7b22df8b24db2f9451c8a 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 304 379 2.5E-6 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C3Y93_10940 05c71b14afb7b22df8b24db2f9451c8a 448 SUPERFAMILY SSF53244 302 447 8.24E-41 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3Y93_10940 05c71b14afb7b22df8b24db2f9451c8a 448 Gene3D G3DSA:3.40.1190.10 94 302 1.9E-61 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3Y93_10940 05c71b14afb7b22df8b24db2f9451c8a 448 Gene3D G3DSA:3.40.50.720 8 93 5.7E-23 T 14-10-2018 C3Y93_10940 05c71b14afb7b22df8b24db2f9451c8a 448 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 447 33.477 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C3Y93_10940 05c71b14afb7b22df8b24db2f9451c8a 448 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 445 2.3E-118 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C3Y93_10940 05c71b14afb7b22df8b24db2f9451c8a 448 SUPERFAMILY SSF53623 98 300 2.44E-51 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3Y93_12990 f638cfd312210e461a152086aaf7fd12 481 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 460 9.1E-105 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 C3Y93_12990 f638cfd312210e461a152086aaf7fd12 481 Gene3D G3DSA:2.20.200.10 102 349 8.1E-128 T 14-10-2018 C3Y93_12990 f638cfd312210e461a152086aaf7fd12 481 Gene3D G3DSA:1.20.1600.10 56 460 8.1E-128 T 14-10-2018 C3Y93_12990 f638cfd312210e461a152086aaf7fd12 481 SUPERFAMILY SSF56954 12 460 3.01E-102 T 14-10-2018 C3Y93_12990 f638cfd312210e461a152086aaf7fd12 481 Pfam PF02321 Outer membrane efflux protein 65 249 2.1E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3Y93_12990 f638cfd312210e461a152086aaf7fd12 481 Pfam PF02321 Outer membrane efflux protein 278 458 3.1E-29 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3Y93_13720 6b10bb118d8ea0b383bbe6d3bffb11ae 334 PIRSF PIRSF000040 1 331 2.1E-98 T 14-10-2018 IPR012078 Methane/phenol monooxygenase, hydroxylase component GO:0016709|GO:0055114 C3Y93_13720 6b10bb118d8ea0b383bbe6d3bffb11ae 334 Gene3D G3DSA:1.10.620.20 1 332 3.6E-107 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 C3Y93_13720 6b10bb118d8ea0b383bbe6d3bffb11ae 334 SUPERFAMILY SSF47240 1 328 4.46E-99 T 14-10-2018 IPR009078 Ferritin-like superfamily C3Y93_13720 6b10bb118d8ea0b383bbe6d3bffb11ae 334 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 51 274 7.6E-57 T 14-10-2018 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 C3Y93_04190 5b27c434ae5fb3cc7a080f0cef99e656 187 Pfam PF00578 AhpC/TSA family 5 132 4.7E-34 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3Y93_04190 5b27c434ae5fb3cc7a080f0cef99e656 187 Gene3D G3DSA:3.40.30.10 1 186 1.1E-63 T 14-10-2018 C3Y93_04190 5b27c434ae5fb3cc7a080f0cef99e656 187 SUPERFAMILY SSF52833 1 186 1.76E-58 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_04190 5b27c434ae5fb3cc7a080f0cef99e656 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 2.3E-6 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3Y93_04190 5b27c434ae5fb3cc7a080f0cef99e656 187 PIRSF PIRSF000239 1 187 5.5E-54 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3Y93_04190 5b27c434ae5fb3cc7a080f0cef99e656 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 6.8E-105 T 14-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 C3Y93_07650 75abba3d24e5023385e6aa637370ba50 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 230 1.7E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3Y93_07650 75abba3d24e5023385e6aa637370ba50 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 130 6.7E-32 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3Y93_07650 75abba3d24e5023385e6aa637370ba50 390 SUPERFAMILY SSF47203 241 390 1.16E-45 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3Y93_07650 75abba3d24e5023385e6aa637370ba50 390 Gene3D G3DSA:2.40.110.10 133 247 2.0E-41 T 14-10-2018 C3Y93_07650 75abba3d24e5023385e6aa637370ba50 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 349 368 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 C3Y93_07650 75abba3d24e5023385e6aa637370ba50 390 Gene3D G3DSA:1.20.140.10 248 390 6.9E-42 T 14-10-2018 C3Y93_07650 75abba3d24e5023385e6aa637370ba50 390 Gene3D G3DSA:1.10.540.10 10 132 1.5E-34 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3Y93_07650 75abba3d24e5023385e6aa637370ba50 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 242 390 1.7E-39 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3Y93_07650 75abba3d24e5023385e6aa637370ba50 390 SUPERFAMILY SSF56645 14 253 1.7E-84 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3Y93_13905 b7265b99bf45bde68e370e19add6dae5 281 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 2.6E-90 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 C3Y93_13905 b7265b99bf45bde68e370e19add6dae5 281 Gene3D G3DSA:3.10.310.10 4 272 9.0E-107 T 14-10-2018 C3Y93_13905 b7265b99bf45bde68e370e19add6dae5 281 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 38.315 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 C3Y93_13905 b7265b99bf45bde68e370e19add6dae5 281 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 C3Y93_13905 b7265b99bf45bde68e370e19add6dae5 281 Pfam PF01678 Diaminopimelate epimerase 5 125 4.4E-32 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 C3Y93_13905 b7265b99bf45bde68e370e19add6dae5 281 Pfam PF01678 Diaminopimelate epimerase 156 266 1.4E-26 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 C3Y93_13905 b7265b99bf45bde68e370e19add6dae5 281 SUPERFAMILY SSF54506 3 276 3.93E-53 T 14-10-2018 C3Y93_13905 b7265b99bf45bde68e370e19add6dae5 281 Gene3D G3DSA:3.10.310.10 117 263 9.0E-107 T 14-10-2018 C3Y93_05250 5bb3a1a1bc009ed2c7e63e8c32ded55c 416 Gene3D G3DSA:3.30.9.50 86 285 1.9E-92 T 14-10-2018 C3Y93_05250 5bb3a1a1bc009ed2c7e63e8c32ded55c 416 Pfam PF01494 FAD binding domain 12 359 2.2E-34 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 C3Y93_05250 5bb3a1a1bc009ed2c7e63e8c32ded55c 416 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 310 323 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 C3Y93_05250 5bb3a1a1bc009ed2c7e63e8c32ded55c 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 165 180 1.8E-19 T 14-10-2018 C3Y93_05250 5bb3a1a1bc009ed2c7e63e8c32ded55c 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 311 1.8E-19 T 14-10-2018 C3Y93_05250 5bb3a1a1bc009ed2c7e63e8c32ded55c 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 311 327 1.8E-19 T 14-10-2018 C3Y93_05250 5bb3a1a1bc009ed2c7e63e8c32ded55c 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 1.8E-19 T 14-10-2018 C3Y93_05250 5bb3a1a1bc009ed2c7e63e8c32ded55c 416 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 12 405 2.7E-105 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 C3Y93_05250 5bb3a1a1bc009ed2c7e63e8c32ded55c 416 Gene3D G3DSA:3.50.50.60 12 353 1.9E-92 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_05250 5bb3a1a1bc009ed2c7e63e8c32ded55c 416 SUPERFAMILY SSF51905 12 399 1.84E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_03475 781a3ec53d0029f078962c180daf2df6 169 SUPERFAMILY SSF50891 6 166 6.43E-59 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily C3Y93_03475 781a3ec53d0029f078962c180daf2df6 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 5.5E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3Y93_03475 781a3ec53d0029f078962c180daf2df6 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 5.5E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3Y93_03475 781a3ec53d0029f078962c180daf2df6 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 5.5E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3Y93_03475 781a3ec53d0029f078962c180daf2df6 169 PIRSF PIRSF001467 1 169 4.3E-27 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 C3Y93_03475 781a3ec53d0029f078962c180daf2df6 169 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 C3Y93_03475 781a3ec53d0029f078962c180daf2df6 169 Gene3D G3DSA:2.40.100.10 3 167 1.3E-66 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily C3Y93_03475 781a3ec53d0029f078962c180daf2df6 169 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 165 5.4E-50 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3Y93_09600 a38cfccb4140f44b7e229afdec8ac85c 238 SUPERFAMILY SSF54211 1 181 8.6E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_09600 a38cfccb4140f44b7e229afdec8ac85c 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 224 1.8E-11 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3Y93_09600 a38cfccb4140f44b7e229afdec8ac85c 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 129 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site C3Y93_09600 a38cfccb4140f44b7e229afdec8ac85c 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.542 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 C3Y93_09600 a38cfccb4140f44b7e229afdec8ac85c 238 SUPERFAMILY SSF55666 153 236 6.28E-25 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3Y93_09600 a38cfccb4140f44b7e229afdec8ac85c 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 7.1E-24 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3Y93_09600 a38cfccb4140f44b7e229afdec8ac85c 238 Gene3D G3DSA:3.30.230.70 10 237 5.0E-65 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C3Y93_09600 a38cfccb4140f44b7e229afdec8ac85c 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.5E-117 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 C3Y93_06060 1bf30e3f6dfa15449a56f5754133d30c 494 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 133 145 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 C3Y93_06060 1bf30e3f6dfa15449a56f5754133d30c 494 Hamap MF_00186 Glycerol kinase [glpK]. 1 494 52.77 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 C3Y93_06060 1bf30e3f6dfa15449a56f5754133d30c 494 SUPERFAMILY SSF53067 252 492 1.55E-83 T 14-10-2018 C3Y93_06060 1bf30e3f6dfa15449a56f5754133d30c 494 SUPERFAMILY SSF53067 1 250 4.09E-88 T 14-10-2018 C3Y93_06060 1bf30e3f6dfa15449a56f5754133d30c 494 Gene3D G3DSA:3.30.420.40 251 493 2.6E-88 T 14-10-2018 C3Y93_06060 1bf30e3f6dfa15449a56f5754133d30c 494 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 491 1.0E-214 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 C3Y93_06060 1bf30e3f6dfa15449a56f5754133d30c 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 447 2.5E-63 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 C3Y93_06060 1bf30e3f6dfa15449a56f5754133d30c 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 2.8E-77 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 C3Y93_06060 1bf30e3f6dfa15449a56f5754133d30c 494 PIRSF PIRSF000538 1 493 1.1E-170 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 C3Y93_06060 1bf30e3f6dfa15449a56f5754133d30c 494 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 C3Y93_06060 1bf30e3f6dfa15449a56f5754133d30c 494 Gene3D G3DSA:3.30.420.40 1 250 2.0E-100 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 Gene3D G3DSA:3.50.50.60 5 318 1.9E-119 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 Gene3D G3DSA:3.50.50.60 144 261 1.9E-119 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 3.7E-209 T 14-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PIRSF PIRSF000350 1 447 1.0E-87 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 5.9E-69 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 5.9E-69 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 5.9E-69 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 5.9E-69 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 5.9E-69 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.9E-69 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 5.9E-69 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.9E-69 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 5.9E-69 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 6.3E-33 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 SUPERFAMILY SSF51905 3 371 5.18E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 Gene3D G3DSA:3.30.390.30 338 450 4.8E-46 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 318 5.6E-67 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.2E-29 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.2E-29 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.2E-29 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.2E-29 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.2E-29 T 14-10-2018 C3Y93_03645 3748aaafd43bdbdca4f5742bbc24ddee 450 SUPERFAMILY SSF55424 336 450 2.41E-34 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3Y93_00695 beea711238acde08c9eb7c0367d631bb 234 Gene3D G3DSA:3.40.1080.10 1 217 2.5E-97 T 14-10-2018 C3Y93_00695 beea711238acde08c9eb7c0367d631bb 234 SUPERFAMILY SSF100950 3 228 1.99E-87 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C3Y93_00695 beea711238acde08c9eb7c0367d631bb 234 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 218 2.7E-81 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 C3Y93_00695 beea711238acde08c9eb7c0367d631bb 234 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 19 34 - T 14-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 C3Y93_00695 beea711238acde08c9eb7c0367d631bb 234 Pfam PF01144 Coenzyme A transferase 7 218 5.4E-80 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 C3Y93_00695 beea711238acde08c9eb7c0367d631bb 234 SMART SM00882 6 218 1.9E-91 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 C3Y93_05485 08db5910d876dae74728eb0122c3406b 696 Gene3D G3DSA:3.90.1310.10 64 245 6.9E-48 T 14-10-2018 C3Y93_05485 08db5910d876dae74728eb0122c3406b 696 SUPERFAMILY SSF56601 250 613 9.58E-94 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3Y93_05485 08db5910d876dae74728eb0122c3406b 696 SUPERFAMILY SSF56519 56 249 7.06E-52 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 C3Y93_05485 08db5910d876dae74728eb0122c3406b 696 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 603 2.5E-71 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 C3Y93_05485 08db5910d876dae74728eb0122c3406b 696 Gene3D G3DSA:3.30.1390.30 85 160 6.9E-48 T 14-10-2018 C3Y93_05485 08db5910d876dae74728eb0122c3406b 696 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 3 610 49.269 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3Y93_05485 08db5910d876dae74728eb0122c3406b 696 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 607 3.6E-213 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3Y93_05485 08db5910d876dae74728eb0122c3406b 696 Gene3D G3DSA:3.40.710.10 249 613 1.3E-94 T 14-10-2018 C3Y93_05485 08db5910d876dae74728eb0122c3406b 696 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 235 1.2E-47 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 C3Y93_09165 05d88a4f7f51afafd3139f4173f5eee3 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 474 3.3E-159 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 C3Y93_09165 05d88a4f7f51afafd3139f4173f5eee3 488 SUPERFAMILY SSF51412 2 478 4.97E-125 T 14-10-2018 C3Y93_09165 05d88a4f7f51afafd3139f4173f5eee3 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 C3Y93_09165 05d88a4f7f51afafd3139f4173f5eee3 488 Pfam PF00571 CBS domain 157 204 3.0E-4 T 14-10-2018 IPR000644 CBS domain C3Y93_09165 05d88a4f7f51afafd3139f4173f5eee3 488 Pfam PF00571 CBS domain 89 137 7.6E-11 T 14-10-2018 IPR000644 CBS domain C3Y93_09165 05d88a4f7f51afafd3139f4173f5eee3 488 SUPERFAMILY SSF54631 93 202 4.55E-27 T 14-10-2018 C3Y93_09165 05d88a4f7f51afafd3139f4173f5eee3 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 487 82.578 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 C3Y93_09165 05d88a4f7f51afafd3139f4173f5eee3 488 PIRSF PIRSF000130 1 488 3.8E-202 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 C3Y93_09165 05d88a4f7f51afafd3139f4173f5eee3 488 SMART SM00116 157 205 5.0E-7 T 14-10-2018 IPR000644 CBS domain C3Y93_09165 05d88a4f7f51afafd3139f4173f5eee3 488 SMART SM00116 96 143 1.2E-8 T 14-10-2018 IPR000644 CBS domain C3Y93_09165 05d88a4f7f51afafd3139f4173f5eee3 488 Gene3D G3DSA:3.20.20.70 2 487 2.9E-208 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_09165 05d88a4f7f51afafd3139f4173f5eee3 488 SMART SM01240 7 474 0.0 T 14-10-2018 C3Y93_09165 05d88a4f7f51afafd3139f4173f5eee3 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 8.1E-188 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 C3Y93_04365 9a274b14cef8c6057a69902e0eb53732 363 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 357 59.88 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 C3Y93_04365 9a274b14cef8c6057a69902e0eb53732 363 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 355 1.8E-110 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 C3Y93_04365 9a274b14cef8c6057a69902e0eb53732 363 Gene3D G3DSA:3.40.640.10 46 268 2.5E-114 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_04365 9a274b14cef8c6057a69902e0eb53732 363 SUPERFAMILY SSF53383 15 357 2.15E-79 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_04365 9a274b14cef8c6057a69902e0eb53732 363 Pfam PF00155 Aminotransferase class I and II 32 353 1.0E-50 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3Y93_04365 9a274b14cef8c6057a69902e0eb53732 363 Gene3D G3DSA:3.90.1150.10 11 350 2.5E-114 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_07705 a6a73221dc0991f379cca0cbb95110c2 165 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 162 33.681 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 C3Y93_07705 a6a73221dc0991f379cca0cbb95110c2 165 Pfam PF03719 Ribosomal protein S5, C-terminal domain 86 156 7.7E-29 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 C3Y93_07705 a6a73221dc0991f379cca0cbb95110c2 165 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 73 2.3E-27 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 C3Y93_07705 a6a73221dc0991f379cca0cbb95110c2 165 Gene3D G3DSA:3.30.230.10 73 165 6.2E-35 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3Y93_07705 a6a73221dc0991f379cca0cbb95110c2 165 Gene3D G3DSA:3.30.160.20 1 72 4.6E-29 T 14-10-2018 C3Y93_07705 a6a73221dc0991f379cca0cbb95110c2 165 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 161 7.7E-64 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 C3Y93_07705 a6a73221dc0991f379cca0cbb95110c2 165 SUPERFAMILY SSF54211 78 157 8.85E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_07705 a6a73221dc0991f379cca0cbb95110c2 165 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site C3Y93_07705 a6a73221dc0991f379cca0cbb95110c2 165 SUPERFAMILY SSF54768 7 75 1.46E-22 T 14-10-2018 C3Y93_08320 9045a739138e65a9c200bc6dc4d0f803 607 Gene3D G3DSA:3.30.450.330 264 591 7.0E-122 T 14-10-2018 C3Y93_08320 9045a739138e65a9c200bc6dc4d0f803 607 Pfam PF00905 Penicillin binding protein transpeptidase domain 289 587 1.2E-75 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 C3Y93_08320 9045a739138e65a9c200bc6dc4d0f803 607 Gene3D G3DSA:3.90.1310.10 147 263 1.9E-31 T 14-10-2018 C3Y93_08320 9045a739138e65a9c200bc6dc4d0f803 607 Gene3D G3DSA:3.90.1310.10 57 138 1.4E-10 T 14-10-2018 C3Y93_08320 9045a739138e65a9c200bc6dc4d0f803 607 Gene3D G3DSA:3.40.710.10 325 507 7.0E-122 T 14-10-2018 C3Y93_08320 9045a739138e65a9c200bc6dc4d0f803 607 SUPERFAMILY SSF56601 263 595 1.25E-89 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3Y93_08320 9045a739138e65a9c200bc6dc4d0f803 607 SUPERFAMILY SSF56519 68 262 5.49E-38 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 C3Y93_08320 9045a739138e65a9c200bc6dc4d0f803 607 Pfam PF03717 Penicillin-binding Protein dimerisation domain 72 246 1.0E-18 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 C3Y93_08320 9045a739138e65a9c200bc6dc4d0f803 607 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 24 602 41.278 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3Y93_05920 2938b3a3cb0401ccec09bdf151e9bd23 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 88 172 3.2E-22 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05920 2938b3a3cb0401ccec09bdf151e9bd23 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 25 179 42.798 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05920 2938b3a3cb0401ccec09bdf151e9bd23 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 45 179 7.5E-68 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05920 2938b3a3cb0401ccec09bdf151e9bd23 225 SUPERFAMILY SSF56770 44 182 1.57E-63 T 14-10-2018 C3Y93_05920 2938b3a3cb0401ccec09bdf151e9bd23 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 146 162 - T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05920 2938b3a3cb0401ccec09bdf151e9bd23 225 Gene3D G3DSA:3.40.50.12280 19 190 8.2E-70 T 14-10-2018 C3Y93_03800 2a8ba05011bc4d397709547cd1728a57 357 SUPERFAMILY SSF81464 14 115 2.62E-22 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03800 2a8ba05011bc4d397709547cd1728a57 357 Gene3D G3DSA:2.60.40.420 111 268 3.5E-47 T 14-10-2018 IPR008972 Cupredoxin C3Y93_03800 2a8ba05011bc4d397709547cd1728a57 357 Gene3D G3DSA:1.10.287.90 26 110 2.8E-30 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03800 2a8ba05011bc4d397709547cd1728a57 357 SUPERFAMILY SSF49503 117 254 1.76E-42 T 14-10-2018 IPR008972 Cupredoxin C3Y93_03800 2a8ba05011bc4d397709547cd1728a57 357 PIRSF PIRSF000292 1 352 2.7E-123 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 C3Y93_03800 2a8ba05011bc4d397709547cd1728a57 357 Pfam PF06481 COX Aromatic Rich Motif 301 323 1.2E-8 T 14-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 C3Y93_03800 2a8ba05011bc4d397709547cd1728a57 357 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 11 236 5.3E-97 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 C3Y93_00855 52392529a5731369a8638e8a6679f8fa 629 Gene3D G3DSA:3.30.2010.10 92 183 2.4E-16 T 14-10-2018 C3Y93_00855 52392529a5731369a8638e8a6679f8fa 629 Pfam PF01435 Peptidase family M48 108 194 1.7E-8 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 C3Y93_07510 7e51a96a6a0c0607828e28efbbb0f9db 74 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 67 20.618 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 C3Y93_07510 7e51a96a6a0c0607828e28efbbb0f9db 74 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 49 1.6E-19 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 C3Y93_07510 7e51a96a6a0c0607828e28efbbb0f9db 74 Pfam PF02416 mttA/Hcf106 family 4 52 1.7E-13 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 C3Y93_07165 4c74b21e98f47ef6697f0c20264a7586 744 PIRSF PIRSF009407 1 744 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 C3Y93_07165 4c74b21e98f47ef6697f0c20264a7586 744 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 741 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 C3Y93_07165 4c74b21e98f47ef6697f0c20264a7586 744 SUPERFAMILY SSF53659 5 742 0.0 T 14-10-2018 C3Y93_07165 4c74b21e98f47ef6697f0c20264a7586 744 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 743 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 C3Y93_07165 4c74b21e98f47ef6697f0c20264a7586 744 Gene3D G3DSA:3.40.718.10 405 665 7.4E-8 T 14-10-2018 C3Y93_10245 9cd34fc1a71eb09545690943a2d1f7d3 203 Pfam PF02397 Bacterial sugar transferase 3 177 1.1E-63 T 14-10-2018 IPR003362 Bacterial sugar transferase C3Y93_14070 025cd1f9d36ceba71a9e1af2ff98d1e3 106 PIRSF PIRSF039032 1 105 2.0E-38 T 14-10-2018 IPR009387 Toxin HigB-2 C3Y93_14070 025cd1f9d36ceba71a9e1af2ff98d1e3 106 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 41 102 7.3E-12 T 14-10-2018 IPR009387 Toxin HigB-2 C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 286 1.2E-32 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 81 94 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 19 287 6.4E-123 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 Pfam PF04545 Sigma-70, region 4 233 283 7.9E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 SUPERFAMILY SSF88659 196 287 5.42E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 Gene3D G3DSA:1.10.10.10 213 288 6.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 PRINTS PR00046 Major sigma-70 factor signature 256 271 9.7E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 PRINTS PR00046 Major sigma-70 factor signature 237 249 9.7E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 PRINTS PR00046 Major sigma-70 factor signature 81 94 9.7E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 PRINTS PR00046 Major sigma-70 factor signature 271 282 9.7E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 5 288 52.214 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 Pfam PF00140 Sigma-70 factor, region 1.2 20 44 1.1E-5 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 Gene3D G3DSA:1.20.120.1810 19 126 2.0E-27 T 14-10-2018 C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 SUPERFAMILY SSF88946 19 126 5.63E-40 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 256 282 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C3Y93_00785 193f907a09d8fda65ba4208048c2aa94 289 Pfam PF04542 Sigma-70 region 2 57 126 2.7E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C3Y93_05555 40e2d60623a397ccd6944c264b355942 176 Pfam PF07152 YaeQ protein 1 172 6.4E-64 T 14-10-2018 IPR009822 YaeQ C3Y93_05555 40e2d60623a397ccd6944c264b355942 176 Gene3D G3DSA:3.10.640.10 1 176 3.3E-66 T 14-10-2018 IPR038590 YaeQ superfamily C3Y93_05555 40e2d60623a397ccd6944c264b355942 176 SMART SM01322 1 174 2.2E-91 T 14-10-2018 IPR009822 YaeQ C3Y93_05555 40e2d60623a397ccd6944c264b355942 176 PIRSF PIRSF011484 1 176 1.2E-58 T 14-10-2018 IPR009822 YaeQ C3Y93_05555 40e2d60623a397ccd6944c264b355942 176 SUPERFAMILY SSF52980 2 176 2.68E-61 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C3Y93_01900 b6b4aa312833dc4b5238aab70dc58342 184 Gene3D G3DSA:1.10.132.20 12 181 6.3E-61 T 14-10-2018 C3Y93_01900 b6b4aa312833dc4b5238aab70dc58342 184 SUPERFAMILY SSF55194 1 184 2.09E-65 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 C3Y93_01900 b6b4aa312833dc4b5238aab70dc58342 184 Gene3D G3DSA:3.30.1360.40 31 104 6.3E-61 T 14-10-2018 C3Y93_01900 b6b4aa312833dc4b5238aab70dc58342 184 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 184 25.105 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 C3Y93_01900 b6b4aa312833dc4b5238aab70dc58342 184 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 184 1.6E-63 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 C3Y93_01900 b6b4aa312833dc4b5238aab70dc58342 184 Pfam PF01765 Ribosome recycling factor 21 182 8.2E-58 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 Pfam PF12327 FtsZ family, C-terminal domain 226 321 2.8E-31 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 Gene3D G3DSA:3.40.50.1440 8 224 9.0E-79 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 PRINTS PR00423 Cell division protein FtsZ signature 131 152 7.8E-46 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 PRINTS PR00423 Cell division protein FtsZ signature 103 123 7.8E-46 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 PRINTS PR00423 Cell division protein FtsZ signature 216 237 7.8E-46 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 PRINTS PR00423 Cell division protein FtsZ signature 193 215 7.8E-46 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 SMART SM00865 211 330 4.1E-47 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 ProSitePatterns PS01134 FtsZ protein signature 1. 49 83 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 14 364 35.984 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 335 1.0E-124 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 SMART SM00864 18 209 6.3E-108 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 Gene3D G3DSA:3.30.1330.20 225 337 3.1E-35 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 ProSitePatterns PS01135 FtsZ protein signature 2. 102 123 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 SUPERFAMILY SSF55307 208 324 2.52E-38 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 20 178 3.4E-42 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C3Y93_09210 16346cc88f8692337ec45098868bf25c 393 SUPERFAMILY SSF52490 17 212 1.18E-67 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 C3Y93_07275 4b7a299e8794025c857fa4ce75d1c1eb 481 Gene3D G3DSA:3.40.50.1220 298 477 4.2E-83 T 14-10-2018 C3Y93_07275 4b7a299e8794025c857fa4ce75d1c1eb 481 PIRSF PIRSF000204 3 478 4.7E-190 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 C3Y93_07275 4b7a299e8794025c857fa4ce75d1c1eb 481 Pfam PF02233 NAD(P) transhydrogenase beta subunit 10 474 8.1E-183 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 C3Y93_07275 4b7a299e8794025c857fa4ce75d1c1eb 481 SUPERFAMILY SSF52467 305 477 4.05E-75 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C3Y93_09205 007998d0b3b190cc99fc55c86b8e52fe 300 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 42.759 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C3Y93_09205 007998d0b3b190cc99fc55c86b8e52fe 300 SUPERFAMILY SSF54211 3 124 1.29E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_09205 007998d0b3b190cc99fc55c86b8e52fe 300 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 297 2.0E-112 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C3Y93_09205 007998d0b3b190cc99fc55c86b8e52fe 300 Gene3D G3DSA:3.30.230.20 1 127 8.5E-44 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C3Y93_09205 007998d0b3b190cc99fc55c86b8e52fe 300 Gene3D G3DSA:3.30.1700.10 128 300 8.0E-62 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C3Y93_09205 007998d0b3b190cc99fc55c86b8e52fe 300 SUPERFAMILY SSF54211 133 277 4.63E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_09205 007998d0b3b190cc99fc55c86b8e52fe 300 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 274 2.7E-98 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 163 172 1.5E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 1.5E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 74 91 1.5E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 297 315 1.5E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 56 74 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 SUPERFAMILY SSF50621 253 412 7.74E-51 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 368 2.4E-22 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 SUPERFAMILY SSF51419 25 281 1.24E-80 T 14-10-2018 IPR029066 PLP-binding barrel C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 Gene3D G3DSA:3.20.20.10 33 274 1.9E-146 T 14-10-2018 IPR029066 PLP-binding barrel C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 279 1.6E-73 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 240 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 Gene3D G3DSA:2.40.37.10 16 407 1.9E-146 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 1.2E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 189 202 1.2E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 56 74 1.2E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 1.2E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 76 88 1.2E-24 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 411 40.849 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_13900 5bd3cceeab75956fe7e45dfcca7ae849 414 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 410 5.7E-161 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_03820 fb574ffceaead5561c92027bb21d9820 292 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 17.131 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 C3Y93_03820 fb574ffceaead5561c92027bb21d9820 292 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site C3Y93_03820 fb574ffceaead5561c92027bb21d9820 292 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 277 5.6E-82 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 C3Y93_03820 fb574ffceaead5561c92027bb21d9820 292 Pfam PF01040 UbiA prenyltransferase family 18 267 2.9E-58 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 C3Y93_03820 fb574ffceaead5561c92027bb21d9820 292 Gene3D G3DSA:1.10.357.140 13 165 6.9E-21 T 14-10-2018 C3Y93_08000 36aa25a28c617b718a87b0a9515fb727 136 SUPERFAMILY SSF141066 42 127 3.14E-17 T 14-10-2018 IPR036331 Chagasin-like superfamily C3Y93_08000 36aa25a28c617b718a87b0a9515fb727 136 Gene3D G3DSA:2.60.40.2020 29 136 3.3E-21 T 14-10-2018 IPR036331 Chagasin-like superfamily C3Y93_08000 36aa25a28c617b718a87b0a9515fb727 136 Pfam PF09394 Chagasin family peptidase inhibitor I42 47 126 5.0E-17 T 14-10-2018 IPR018990 Proteinase inhibitor I42, chagasin C3Y93_13270 dc24160d0e33ea5a00e881c83d31b159 121 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 12 106 4.4E-7 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_13270 dc24160d0e33ea5a00e881c83d31b159 121 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 9 119 1.9E-32 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 C3Y93_13270 dc24160d0e33ea5a00e881c83d31b159 121 PIRSF PIRSF000169 1 121 1.8E-38 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 C3Y93_13270 dc24160d0e33ea5a00e881c83d31b159 121 Gene3D G3DSA:1.20.1300.10 1 120 6.9E-28 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_13270 dc24160d0e33ea5a00e881c83d31b159 121 SUPERFAMILY SSF81343 4 119 6.38E-25 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C3Y93_11595 db2c4c8a8500f1d9b4040e9f3c0a105b 570 Gene3D G3DSA:3.30.9.90 83 470 9.2E-189 T 14-10-2018 C3Y93_11595 db2c4c8a8500f1d9b4040e9f3c0a105b 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 5.1E-7 T 14-10-2018 C3Y93_11595 db2c4c8a8500f1d9b4040e9f3c0a105b 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 183 198 5.1E-7 T 14-10-2018 C3Y93_11595 db2c4c8a8500f1d9b4040e9f3c0a105b 570 SUPERFAMILY SSF51905 6 445 7.32E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_11595 db2c4c8a8500f1d9b4040e9f3c0a105b 570 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 466 567 1.8E-50 T 14-10-2018 C3Y93_11595 db2c4c8a8500f1d9b4040e9f3c0a105b 570 Gene3D G3DSA:3.50.50.60 10 407 9.2E-189 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_11595 db2c4c8a8500f1d9b4040e9f3c0a105b 570 SUPERFAMILY SSF54373 215 311 7.45E-34 T 14-10-2018 C3Y93_11595 db2c4c8a8500f1d9b4040e9f3c0a105b 570 Gene3D G3DSA:3.30.70.20 471 565 3.2E-37 T 14-10-2018 C3Y93_11595 db2c4c8a8500f1d9b4040e9f3c0a105b 570 SUPERFAMILY SSF54862 470 570 1.9E-29 T 14-10-2018 C3Y93_11595 db2c4c8a8500f1d9b4040e9f3c0a105b 570 Pfam PF13450 NAD(P)-binding Rossmann-like domain 15 61 1.0E-5 T 14-10-2018 C3Y93_07285 479d2dcd5d3841fd8540b454f718f6fe 375 SMART SM01003 4 136 1.5E-51 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal C3Y93_07285 479d2dcd5d3841fd8540b454f718f6fe 375 SMART SM01002 145 316 9.8E-75 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain C3Y93_07285 479d2dcd5d3841fd8540b454f718f6fe 375 Gene3D G3DSA:3.40.50.720 136 323 3.8E-129 T 14-10-2018 C3Y93_07285 479d2dcd5d3841fd8540b454f718f6fe 375 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 C3Y93_07285 479d2dcd5d3841fd8540b454f718f6fe 375 SUPERFAMILY SSF51735 136 322 9.27E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_07285 479d2dcd5d3841fd8540b454f718f6fe 375 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 169 194 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 C3Y93_07285 479d2dcd5d3841fd8540b454f718f6fe 375 Gene3D G3DSA:3.40.50.720 3 369 3.8E-129 T 14-10-2018 C3Y93_07285 479d2dcd5d3841fd8540b454f718f6fe 375 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 7.8E-37 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal C3Y93_07285 479d2dcd5d3841fd8540b454f718f6fe 375 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 371 6.3E-72 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain C3Y93_07285 479d2dcd5d3841fd8540b454f718f6fe 375 SUPERFAMILY SSF52283 1 167 9.35E-46 T 14-10-2018 C3Y93_08285 1e360a46d35b2f1f5c3cad5f12cc48de 211 Pfam PF05137 Fimbrial assembly protein (PilN) 100 167 4.7E-16 T 14-10-2018 IPR007813 Fimbrial assembly PilN C3Y93_10585 863fa2de3b0858695276155f15797a1c 289 Gene3D G3DSA:3.40.1380.10 61 208 2.7E-101 T 14-10-2018 C3Y93_10585 863fa2de3b0858695276155f15797a1c 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10585 863fa2de3b0858695276155f15797a1c 289 Gene3D G3DSA:1.10.287.80 6 285 2.7E-101 T 14-10-2018 C3Y93_10585 863fa2de3b0858695276155f15797a1c 289 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 4.2E-33 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10585 863fa2de3b0858695276155f15797a1c 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 4.2E-33 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10585 863fa2de3b0858695276155f15797a1c 289 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 4.2E-33 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10585 863fa2de3b0858695276155f15797a1c 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 4.2E-33 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10585 863fa2de3b0858695276155f15797a1c 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 1.9E-103 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10585 863fa2de3b0858695276155f15797a1c 289 SUPERFAMILY SSF52943 2 289 1.57E-91 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10585 863fa2de3b0858695276155f15797a1c 289 Pfam PF00231 ATP synthase 3 288 5.9E-93 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10585 863fa2de3b0858695276155f15797a1c 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 35.821 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_12840 324c5d8df6132b9d97cdbb61f5ede632 205 SUPERFAMILY SSF55821 4 203 1.1E-56 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily C3Y93_12840 324c5d8df6132b9d97cdbb61f5ede632 205 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 200 7.3E-58 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 C3Y93_12840 324c5d8df6132b9d97cdbb61f5ede632 205 Gene3D G3DSA:3.90.870.10 2 205 8.6E-59 T 14-10-2018 C3Y93_12840 324c5d8df6132b9d97cdbb61f5ede632 205 Pfam PF01300 Telomere recombination 22 197 4.1E-41 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 C3Y93_06895 60a793d3b592f8b239ce14cf685d2470 414 PIRSF PIRSF001413 3 413 2.3E-165 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_06895 60a793d3b592f8b239ce14cf685d2470 414 Gene3D G3DSA:3.40.50.1100 70 400 1.7E-183 T 14-10-2018 C3Y93_06895 60a793d3b592f8b239ce14cf685d2470 414 SUPERFAMILY SSF53686 19 404 2.36E-149 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3Y93_06895 60a793d3b592f8b239ce14cf685d2470 414 Gene3D G3DSA:3.40.50.1100 26 222 1.7E-183 T 14-10-2018 C3Y93_06895 60a793d3b592f8b239ce14cf685d2470 414 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 18 407 52.058 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_06895 60a793d3b592f8b239ce14cf685d2470 414 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 97 111 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_06895 60a793d3b592f8b239ce14cf685d2470 414 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 69 394 4.1E-47 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3Y93_06895 60a793d3b592f8b239ce14cf685d2470 414 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 23 405 8.0E-189 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_01475 e763bcb2590b23dfc22777d32cbe4d02 181 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 45.598 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3Y93_01475 e763bcb2590b23dfc22777d32cbe4d02 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.0E-35 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3Y93_01475 e763bcb2590b23dfc22777d32cbe4d02 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.0E-35 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3Y93_01475 e763bcb2590b23dfc22777d32cbe4d02 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.0E-35 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3Y93_01475 e763bcb2590b23dfc22777d32cbe4d02 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.0E-35 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3Y93_01475 e763bcb2590b23dfc22777d32cbe4d02 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.0E-35 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3Y93_01475 e763bcb2590b23dfc22777d32cbe4d02 181 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 154 1.0E-60 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3Y93_01475 e763bcb2590b23dfc22777d32cbe4d02 181 Gene3D G3DSA:3.30.420.10 2 158 3.8E-51 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_01475 e763bcb2590b23dfc22777d32cbe4d02 181 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.7E-58 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C3Y93_01475 e763bcb2590b23dfc22777d32cbe4d02 181 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 C3Y93_01475 e763bcb2590b23dfc22777d32cbe4d02 181 SUPERFAMILY SSF53098 3 156 1.14E-52 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_00090 61e50da53636c3df6d23f8c103a209ac 335 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 9 235 7.2E-116 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 C3Y93_00090 61e50da53636c3df6d23f8c103a209ac 335 SUPERFAMILY SSF46785 257 330 8.16E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_00090 61e50da53636c3df6d23f8c103a209ac 335 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 335 175.941 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 C3Y93_00090 61e50da53636c3df6d23f8c103a209ac 335 Gene3D G3DSA:1.10.10.10 257 334 1.8E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_00090 61e50da53636c3df6d23f8c103a209ac 335 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 326 3.9E-143 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 C3Y93_00090 61e50da53636c3df6d23f8c103a209ac 335 SUPERFAMILY SSF52540 20 252 7.12E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00090 61e50da53636c3df6d23f8c103a209ac 335 Gene3D G3DSA:1.10.8.60 182 255 5.5E-32 T 14-10-2018 C3Y93_00090 61e50da53636c3df6d23f8c103a209ac 335 Gene3D G3DSA:3.40.50.300 18 181 1.7E-37 T 14-10-2018 C3Y93_00090 61e50da53636c3df6d23f8c103a209ac 335 SMART SM00382 51 178 9.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_00090 61e50da53636c3df6d23f8c103a209ac 335 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 250 328 3.0E-29 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 C3Y93_00090 61e50da53636c3df6d23f8c103a209ac 335 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 5.8E-30 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 C3Y93_04975 4a6d2739a4af521b2fd08501ea8fe80b 403 Gene3D G3DSA:1.20.1250.20 10 399 1.5E-48 T 14-10-2018 C3Y93_04975 4a6d2739a4af521b2fd08501ea8fe80b 403 Pfam PF07690 Major Facilitator Superfamily 20 360 2.9E-33 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_04975 4a6d2739a4af521b2fd08501ea8fe80b 403 SUPERFAMILY SSF103473 5 395 3.92E-58 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 Pfam PF00106 short chain dehydrogenase 5 199 5.7E-57 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 Gene3D G3DSA:3.40.50.720 2 247 1.3E-76 T 14-10-2018 C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 190 3.0E-4 T 14-10-2018 C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.9E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.9E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.9E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 5 247 1.8E-117 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.6E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.6E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.6E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.6E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 4.6E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.6E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03855 2da8b14c0ca71825c72e2b74fd64e59a 248 SUPERFAMILY SSF51735 3 247 1.52E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 Gene3D G3DSA:3.40.50.720 12 203 1.4E-60 T 14-10-2018 C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 204 225 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 21 338 33.868 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 23 173 4.5E-49 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 Gene3D G3DSA:1.10.1040.10 205 351 4.0E-47 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 SUPERFAMILY SSF51735 22 193 1.34E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 PIRSF PIRSF000114 16 348 7.7E-105 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 189 213 4.7E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 214 238 4.7E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 254 271 4.7E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 25 42 4.7E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 75 102 4.7E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 149 169 4.7E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 196 335 8.2E-48 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C3Y93_00820 cf2b8f9a84c463ce864a99cd7364569b 357 SUPERFAMILY SSF48179 195 347 5.67E-51 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3Y93_12335 b988dcf230861236fdb4ebde6930223c 354 Gene3D G3DSA:1.10.10.60 235 348 7.6E-19 T 14-10-2018 C3Y93_12335 b988dcf230861236fdb4ebde6930223c 354 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 45 208 1.8E-20 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal C3Y93_12335 b988dcf230861236fdb4ebde6930223c 354 SUPERFAMILY SSF46689 292 340 3.27E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_12335 b988dcf230861236fdb4ebde6930223c 354 Pfam PF12833 Helix-turn-helix domain 263 332 1.4E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_12335 b988dcf230861236fdb4ebde6930223c 354 SMART SM00342 256 337 2.0E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_04925 4dbbadcd0c6de56e89e5629d41180ad0 271 TIGRFAM TIGR03138 QueF: queuine synthase 3 271 3.5E-110 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 C3Y93_04925 4dbbadcd0c6de56e89e5629d41180ad0 271 Pfam PF14489 QueF-like protein 184 255 1.9E-21 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 C3Y93_04925 4dbbadcd0c6de56e89e5629d41180ad0 271 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 14 121 6.9E-37 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 C3Y93_04925 4dbbadcd0c6de56e89e5629d41180ad0 271 PIRSF PIRSF004750 1 271 2.5E-107 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 C3Y93_04925 4dbbadcd0c6de56e89e5629d41180ad0 271 Gene3D G3DSA:3.30.1130.10 132 271 1.6E-53 T 14-10-2018 C3Y93_04925 4dbbadcd0c6de56e89e5629d41180ad0 271 SUPERFAMILY SSF55620 151 255 1.78E-10 T 14-10-2018 C3Y93_04925 4dbbadcd0c6de56e89e5629d41180ad0 271 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 271 116.567 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 C3Y93_04925 4dbbadcd0c6de56e89e5629d41180ad0 271 Gene3D G3DSA:3.30.1130.10 14 130 7.6E-39 T 14-10-2018 C3Y93_10760 d9dd59e2385f4e1a8a06c48624f2afd3 439 Gene3D G3DSA:1.20.1250.20 12 438 1.6E-93 T 14-10-2018 C3Y93_10760 d9dd59e2385f4e1a8a06c48624f2afd3 439 SUPERFAMILY SSF103473 8 436 5.62E-90 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_10760 d9dd59e2385f4e1a8a06c48624f2afd3 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C3Y93_10760 d9dd59e2385f4e1a8a06c48624f2afd3 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 89 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C3Y93_10760 d9dd59e2385f4e1a8a06c48624f2afd3 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 320 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C3Y93_10760 d9dd59e2385f4e1a8a06c48624f2afd3 439 Pfam PF00083 Sugar (and other) transporter 54 437 2.3E-44 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 C3Y93_13760 3a6d2b819f4a2b217e406fd12b032381 230 SUPERFAMILY SSF51182 4 227 1.47E-61 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C3Y93_13760 3a6d2b819f4a2b217e406fd12b032381 230 Pfam PF02678 Pirin 13 119 2.2E-30 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 C3Y93_13760 3a6d2b819f4a2b217e406fd12b032381 230 Gene3D G3DSA:2.60.120.10 9 228 2.8E-77 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3Y93_13760 3a6d2b819f4a2b217e406fd12b032381 230 Gene3D G3DSA:2.60.120.10 12 135 2.8E-77 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3Y93_13760 3a6d2b819f4a2b217e406fd12b032381 230 PIRSF PIRSF006232 2 226 2.0E-45 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 C3Y93_10445 044bd06e0bd7d15f1e281d298de1f4e5 944 Gene3D G3DSA:1.10.8.280 288 404 2.4E-244 T 14-10-2018 C3Y93_10445 044bd06e0bd7d15f1e281d298de1f4e5 944 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 942 22.227 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 C3Y93_10445 044bd06e0bd7d15f1e281d298de1f4e5 944 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_10445 044bd06e0bd7d15f1e281d298de1f4e5 944 Pfam PF00005 ABC transporter 625 862 6.5E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_10445 044bd06e0bd7d15f1e281d298de1f4e5 944 Gene3D G3DSA:1.20.1580.10 92 493 2.4E-244 T 14-10-2018 C3Y93_10445 044bd06e0bd7d15f1e281d298de1f4e5 944 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 927 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 C3Y93_10445 044bd06e0bd7d15f1e281d298de1f4e5 944 Gene3D G3DSA:1.20.1580.10 694 832 1.1E-141 T 14-10-2018 C3Y93_10445 044bd06e0bd7d15f1e281d298de1f4e5 944 SUPERFAMILY SSF52540 623 915 2.33E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_10445 044bd06e0bd7d15f1e281d298de1f4e5 944 SUPERFAMILY SSF52540 6 570 4.97E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_10445 044bd06e0bd7d15f1e281d298de1f4e5 944 Gene3D G3DSA:3.30.190.20 132 245 2.4E-244 T 14-10-2018 C3Y93_10445 044bd06e0bd7d15f1e281d298de1f4e5 944 Gene3D G3DSA:3.40.50.300 8 596 2.4E-244 T 14-10-2018 C3Y93_10445 044bd06e0bd7d15f1e281d298de1f4e5 944 ProSitePatterns PS00211 ABC transporters family signature. 832 846 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_10445 044bd06e0bd7d15f1e281d298de1f4e5 944 Gene3D G3DSA:3.40.50.300 618 938 1.1E-141 T 14-10-2018 C3Y93_07660 16fe99ac3538fe1cb0c8e5b55bf383c7 121 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.225 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07660 16fe99ac3538fe1cb0c8e5b55bf383c7 121 Gene3D G3DSA:3.90.1030.10 1 117 1.0E-45 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07660 16fe99ac3538fe1cb0c8e5b55bf383c7 121 Pfam PF01196 Ribosomal protein L17 20 116 2.9E-33 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07660 16fe99ac3538fe1cb0c8e5b55bf383c7 121 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 6.7E-45 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07660 16fe99ac3538fe1cb0c8e5b55bf383c7 121 SUPERFAMILY SSF64263 1 119 5.23E-49 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07660 16fe99ac3538fe1cb0c8e5b55bf383c7 121 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_13755 ac2c96e9023fb4e572c7757347f95879 355 Gene3D G3DSA:3.50.50.60 2 354 5.9E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_13755 ac2c96e9023fb4e572c7757347f95879 355 SUPERFAMILY SSF51905 163 352 6.24E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_13755 ac2c96e9023fb4e572c7757347f95879 355 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 163 187 1.7E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_13755 ac2c96e9023fb4e572c7757347f95879 355 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 132 1.7E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_13755 ac2c96e9023fb4e572c7757347f95879 355 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.7E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_13755 ac2c96e9023fb4e572c7757347f95879 355 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 10 187 1.6E-24 T 14-10-2018 C3Y93_13755 ac2c96e9023fb4e572c7757347f95879 355 SUPERFAMILY SSF51905 6 192 2.83E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_13755 ac2c96e9023fb4e572c7757347f95879 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.2E-5 T 14-10-2018 C3Y93_13755 ac2c96e9023fb4e572c7757347f95879 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 2.2E-5 T 14-10-2018 C3Y93_13790 e262cb127e6e31b1f2ea7a88b346346c 451 SUPERFAMILY SSF55073 295 449 4.08E-42 T 14-10-2018 IPR029787 Nucleotide cyclase C3Y93_13790 e262cb127e6e31b1f2ea7a88b346346c 451 Pfam PF00990 Diguanylate cyclase, GGDEF domain 293 447 5.3E-40 T 14-10-2018 IPR000160 GGDEF domain C3Y93_13790 e262cb127e6e31b1f2ea7a88b346346c 451 Gene3D G3DSA:3.30.70.270 293 451 2.8E-47 T 14-10-2018 C3Y93_13790 e262cb127e6e31b1f2ea7a88b346346c 451 Gene3D G3DSA:1.10.490.10 3 152 7.1E-40 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 C3Y93_13790 e262cb127e6e31b1f2ea7a88b346346c 451 SMART SM00267 281 451 5.2E-48 T 14-10-2018 IPR000160 GGDEF domain C3Y93_13790 e262cb127e6e31b1f2ea7a88b346346c 451 SUPERFAMILY SSF46458 25 131 9.49E-10 T 14-10-2018 IPR009050 Globin-like superfamily C3Y93_13790 e262cb127e6e31b1f2ea7a88b346346c 451 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 291 450 1.2E-43 T 14-10-2018 IPR000160 GGDEF domain C3Y93_13790 e262cb127e6e31b1f2ea7a88b346346c 451 Pfam PF11563 Protoglobin 25 139 1.3E-8 T 14-10-2018 C3Y93_00800 98c57f2287b334c4f34a69997ee7bd58 383 Pfam PF00270 DEAD/DEAH box helicase 27 200 8.4E-49 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C3Y93_00800 98c57f2287b334c4f34a69997ee7bd58 383 SUPERFAMILY SSF52540 78 365 7.43E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00800 98c57f2287b334c4f34a69997ee7bd58 383 Pfam PF00271 Helicase conserved C-terminal domain 237 346 1.1E-29 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_00800 98c57f2287b334c4f34a69997ee7bd58 383 SMART SM00487 22 229 8.5E-58 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3Y93_00800 98c57f2287b334c4f34a69997ee7bd58 383 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site C3Y93_00800 98c57f2287b334c4f34a69997ee7bd58 383 SMART SM00490 265 346 1.2E-29 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_00800 98c57f2287b334c4f34a69997ee7bd58 383 Gene3D G3DSA:3.40.50.300 1 217 6.8E-75 T 14-10-2018 C3Y93_00800 98c57f2287b334c4f34a69997ee7bd58 383 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 2 382 49.237 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 C3Y93_00800 98c57f2287b334c4f34a69997ee7bd58 383 Gene3D G3DSA:3.40.50.300 220 380 6.0E-50 T 14-10-2018 C3Y93_13305 00147834a3b492d50061f8d214101840 388 SUPERFAMILY SSF52210 240 386 2.22E-53 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3Y93_13305 00147834a3b492d50061f8d214101840 388 PIRSF PIRSF001554 1 388 6.0E-149 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3Y93_13305 00147834a3b492d50061f8d214101840 388 Pfam PF00549 CoA-ligase 263 382 8.8E-25 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3Y93_13305 00147834a3b492d50061f8d214101840 388 Gene3D G3DSA:3.30.1490.20 21 105 1.3E-87 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C3Y93_13305 00147834a3b492d50061f8d214101840 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 386 7.2E-160 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3Y93_13305 00147834a3b492d50061f8d214101840 388 Gene3D G3DSA:3.30.470.20 1 235 1.3E-87 T 14-10-2018 C3Y93_13305 00147834a3b492d50061f8d214101840 388 SUPERFAMILY SSF56059 1 239 3.73E-78 T 14-10-2018 C3Y93_13305 00147834a3b492d50061f8d214101840 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 387 42.561 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3Y93_13305 00147834a3b492d50061f8d214101840 388 Gene3D G3DSA:3.40.50.261 241 388 2.9E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3Y93_13305 00147834a3b492d50061f8d214101840 388 Pfam PF08442 ATP-grasp domain 2 203 1.1E-76 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C3Y93_13305 00147834a3b492d50061f8d214101840 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 258 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C3Y93_02165 366efaa9b0a1de6768d49188f959295e 89 Pfam PF13308 YARHG domain 24 83 2.0E-8 T 14-10-2018 IPR025582 YARHG domain C3Y93_02165 366efaa9b0a1de6768d49188f959295e 89 Gene3D G3DSA:1.20.58.1690 4 84 4.0E-6 T 14-10-2018 IPR038434 YARHG domain superfamily C3Y93_02165 366efaa9b0a1de6768d49188f959295e 89 SMART SM01324 11 84 1.7E-9 T 14-10-2018 IPR025582 YARHG domain C3Y93_09775 6674e8775aa6627b13629a9b6f4711c2 130 SUPERFAMILY SSF54211 6 120 1.04E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_09775 6674e8775aa6627b13629a9b6f4711c2 130 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 7 117 16.261 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 C3Y93_09775 6674e8775aa6627b13629a9b6f4711c2 130 Pfam PF00825 Ribonuclease P 7 114 2.4E-25 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 C3Y93_09775 6674e8775aa6627b13629a9b6f4711c2 130 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 58 72 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 C3Y93_09775 6674e8775aa6627b13629a9b6f4711c2 130 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 9 117 1.4E-23 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 C3Y93_09775 6674e8775aa6627b13629a9b6f4711c2 130 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 18 109 2.0E-39 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 C3Y93_09775 6674e8775aa6627b13629a9b6f4711c2 130 Gene3D G3DSA:3.30.230.10 3 121 5.2E-37 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3Y93_11750 6ff87f18ee9c55583838eea24338bece 320 Pfam PF00849 RNA pseudouridylate synthase 104 248 3.2E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_11750 6ff87f18ee9c55583838eea24338bece 320 Gene3D G3DSA:3.10.290.10 10 77 4.1E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3Y93_11750 6ff87f18ee9c55583838eea24338bece 320 Pfam PF01479 S4 domain 22 68 1.3E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_11750 6ff87f18ee9c55583838eea24338bece 320 SUPERFAMILY SSF55174 21 72 4.58E-10 T 14-10-2018 C3Y93_11750 6ff87f18ee9c55583838eea24338bece 320 SMART SM00363 22 77 1.2E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_11750 6ff87f18ee9c55583838eea24338bece 320 SUPERFAMILY SSF55120 95 309 6.08E-57 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_11750 6ff87f18ee9c55583838eea24338bece 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 18 306 7.3E-79 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_11750 6ff87f18ee9c55583838eea24338bece 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_11750 6ff87f18ee9c55583838eea24338bece 320 Gene3D G3DSA:3.30.2350.10 95 310 4.4E-67 T 14-10-2018 C3Y93_02785 8ec783945212c0762fc1f2aa1c2d9833 204 Gene3D G3DSA:2.10.109.10 67 202 4.2E-30 T 14-10-2018 C3Y93_02785 8ec783945212c0762fc1f2aa1c2d9833 204 Pfam PF00717 Peptidase S24-like 98 143 5.7E-8 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C C3Y93_02785 8ec783945212c0762fc1f2aa1c2d9833 204 SUPERFAMILY SSF51306 55 199 1.55E-20 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily C3Y93_11550 76243bb79b879af644050c3de9886e29 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 10 141 8.9E-45 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 C3Y93_11550 76243bb79b879af644050c3de9886e29 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 4.1E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_11550 76243bb79b879af644050c3de9886e29 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 8.9E-17 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C3Y93_11550 76243bb79b879af644050c3de9886e29 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 8.9E-17 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C3Y93_11550 76243bb79b879af644050c3de9886e29 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 3.2E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_11550 76243bb79b879af644050c3de9886e29 144 Gene3D G3DSA:3.30.700.10 34 142 3.7E-30 T 14-10-2018 C3Y93_11550 76243bb79b879af644050c3de9886e29 144 Pfam PF08334 Type II secretion system (T2SS), protein G 34 141 3.2E-34 T 14-10-2018 IPR013545 Type II secretion system protein G C3Y93_11550 76243bb79b879af644050c3de9886e29 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_11550 76243bb79b879af644050c3de9886e29 144 SUPERFAMILY SSF54523 38 142 7.32E-26 T 14-10-2018 C3Y93_08845 a7fdc3cc62a6ba9c909d880b6701982d 193 ProSitePatterns PS00397 Site-specific recombinases active site. 13 21 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 C3Y93_08845 a7fdc3cc62a6ba9c909d880b6701982d 193 Gene3D G3DSA:3.40.50.1390 10 133 2.3E-40 T 14-10-2018 C3Y93_08845 a7fdc3cc62a6ba9c909d880b6701982d 193 SMART SM00857 10 144 2.9E-47 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C3Y93_08845 a7fdc3cc62a6ba9c909d880b6701982d 193 Pfam PF00239 Resolvase, N terminal domain 11 144 2.1E-37 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C3Y93_08845 a7fdc3cc62a6ba9c909d880b6701982d 193 SUPERFAMILY SSF53041 10 144 2.35E-40 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 C3Y93_12055 25579a8f3fb6c5b3188daff130028f03 263 SUPERFAMILY SSF74653 145 260 2.75E-18 T 14-10-2018 C3Y93_12055 25579a8f3fb6c5b3188daff130028f03 263 Gene3D G3DSA:3.30.1150.10 136 260 2.2E-13 T 14-10-2018 C3Y93_12055 25579a8f3fb6c5b3188daff130028f03 263 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 193 256 7.5E-11 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 C3Y93_12055 25579a8f3fb6c5b3188daff130028f03 263 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 192 256 6.4E-14 T 14-10-2018 IPR006260 TonB/TolA, C-terminal C3Y93_13865 b16bb925dd078a41bfa09f831c8968b4 208 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 9.7E-37 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3Y93_13865 b16bb925dd078a41bfa09f831c8968b4 208 Gene3D G3DSA:1.10.287.990 21 88 9.1E-26 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3Y93_13865 b16bb925dd078a41bfa09f831c8968b4 208 PIRSF PIRSF000349 1 207 4.5E-81 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3Y93_13865 b16bb925dd078a41bfa09f831c8968b4 208 SUPERFAMILY SSF46609 3 88 1.7E-35 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3Y93_13865 b16bb925dd078a41bfa09f831c8968b4 208 Gene3D G3DSA:2.40.500.20 91 207 2.5E-41 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3Y93_13865 b16bb925dd078a41bfa09f831c8968b4 208 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3Y93_13865 b16bb925dd078a41bfa09f831c8968b4 208 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 7.3E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3Y93_13865 b16bb925dd078a41bfa09f831c8968b4 208 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 7.3E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3Y93_13865 b16bb925dd078a41bfa09f831c8968b4 208 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 7.3E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3Y93_13865 b16bb925dd078a41bfa09f831c8968b4 208 PRINTS PR01703 Manganese superoxide dismutase signature 71 84 7.3E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3Y93_13865 b16bb925dd078a41bfa09f831c8968b4 208 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 7.3E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3Y93_13865 b16bb925dd078a41bfa09f831c8968b4 208 SUPERFAMILY SSF54719 90 200 4.32E-42 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3Y93_13865 b16bb925dd078a41bfa09f831c8968b4 208 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 5 88 2.5E-33 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C3Y93_01625 298da972a5db77315af785b4f17567de 432 Hamap MF_01183 Chaperone SurA [surA]. 13 425 25.662 T 14-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 C3Y93_01625 298da972a5db77315af785b4f17567de 432 Pfam PF09312 SurA N-terminal domain 30 148 1.3E-24 T 14-10-2018 IPR015391 SurA N-terminal C3Y93_01625 298da972a5db77315af785b4f17567de 432 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 318 339 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 C3Y93_01625 298da972a5db77315af785b4f17567de 432 Pfam PF13616 PPIC-type PPIASE domain 279 380 3.0E-29 T 14-10-2018 C3Y93_01625 298da972a5db77315af785b4f17567de 432 Pfam PF00639 PPIC-type PPIASE domain 190 268 4.0E-6 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 C3Y93_01625 298da972a5db77315af785b4f17567de 432 Gene3D G3DSA:3.10.50.40 178 272 5.1E-46 T 14-10-2018 C3Y93_01625 298da972a5db77315af785b4f17567de 432 SUPERFAMILY SSF54534 179 273 3.92E-12 T 14-10-2018 C3Y93_01625 298da972a5db77315af785b4f17567de 432 SUPERFAMILY SSF54534 281 381 5.36E-31 T 14-10-2018 C3Y93_01625 298da972a5db77315af785b4f17567de 432 SUPERFAMILY SSF109998 30 206 8.63E-29 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily C3Y93_01625 298da972a5db77315af785b4f17567de 432 Gene3D G3DSA:3.10.50.40 277 417 8.1E-41 T 14-10-2018 C3Y93_01625 298da972a5db77315af785b4f17567de 432 Gene3D G3DSA:1.10.4030.30 30 276 5.1E-46 T 14-10-2018 C3Y93_06910 bd888f19fcaa527aceb4cfb32d2dcb04 194 Gene3D G3DSA:1.20.1200.10 17 189 1.2E-53 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 C3Y93_06910 bd888f19fcaa527aceb4cfb32d2dcb04 194 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 185 2.7E-51 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 C3Y93_06910 bd888f19fcaa527aceb4cfb32d2dcb04 194 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 26 186 2.0E-73 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 C3Y93_06910 bd888f19fcaa527aceb4cfb32d2dcb04 194 SUPERFAMILY SSF89028 7 185 1.16E-55 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 C3Y93_06910 bd888f19fcaa527aceb4cfb32d2dcb04 194 Pfam PF01923 Cobalamin adenosyltransferase 8 172 7.9E-54 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 C3Y93_02495 50fa77bee9e08f0af12aa181d74cd8ae 342 Gene3D G3DSA:1.10.10.60 236 340 4.2E-27 T 14-10-2018 C3Y93_02495 50fa77bee9e08f0af12aa181d74cd8ae 342 SMART SM00342 255 337 1.9E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_02495 50fa77bee9e08f0af12aa181d74cd8ae 342 Pfam PF12833 Helix-turn-helix domain 262 338 8.8E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_02495 50fa77bee9e08f0af12aa181d74cd8ae 342 SUPERFAMILY SSF46689 290 339 2.87E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_02495 50fa77bee9e08f0af12aa181d74cd8ae 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 211 3.0E-25 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal C3Y93_02495 50fa77bee9e08f0af12aa181d74cd8ae 342 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 2.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 C3Y93_02495 50fa77bee9e08f0af12aa181d74cd8ae 342 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 2.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 C3Y93_10645 04d74cd243854ac3a319a55c583afb40 142 Pfam PF11162 Protein of unknown function (DUF2946) 22 139 2.5E-6 T 14-10-2018 IPR021333 Protein of unknown function DUF2946 C3Y93_01085 ae16a33f656cc6045e1ab90dc6a7552d 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 225 232 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 C3Y93_01085 ae16a33f656cc6045e1ab90dc6a7552d 481 Gene3D G3DSA:3.40.605.10 26 449 4.4E-138 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C3Y93_01085 ae16a33f656cc6045e1ab90dc6a7552d 481 PIRSF PIRSF036492 4 481 5.6E-148 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 C3Y93_01085 ae16a33f656cc6045e1ab90dc6a7552d 481 Pfam PF00171 Aldehyde dehydrogenase family 26 447 1.6E-73 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3Y93_01085 ae16a33f656cc6045e1ab90dc6a7552d 481 Gene3D G3DSA:3.40.309.10 229 429 4.4E-138 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C3Y93_01085 ae16a33f656cc6045e1ab90dc6a7552d 481 SUPERFAMILY SSF53720 18 451 7.98E-101 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3Y93_08815 060bb7facc33099ef0d2eede00a461e0 429 TIGRFAM TIGR03219 salicylate_mono: salicylate 1-monooxygenase 5 416 1.6E-183 T 14-10-2018 IPR017631 Salicylate 1-monooxygenase KEGG: 00621+1.14.13.1|KEGG: 00624+1.14.13.1|KEGG: 00626+1.14.13.1|MetaCyc: PWY-6107|MetaCyc: PWY-6183|MetaCyc: PWY-6184 C3Y93_08815 060bb7facc33099ef0d2eede00a461e0 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 318 3.4E-18 T 14-10-2018 C3Y93_08815 060bb7facc33099ef0d2eede00a461e0 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 3.4E-18 T 14-10-2018 C3Y93_08815 060bb7facc33099ef0d2eede00a461e0 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 318 334 3.4E-18 T 14-10-2018 C3Y93_08815 060bb7facc33099ef0d2eede00a461e0 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.4E-18 T 14-10-2018 C3Y93_08815 060bb7facc33099ef0d2eede00a461e0 429 SUPERFAMILY SSF54373 182 292 2.43E-14 T 14-10-2018 C3Y93_08815 060bb7facc33099ef0d2eede00a461e0 429 SUPERFAMILY SSF51905 5 404 4.1E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_08815 060bb7facc33099ef0d2eede00a461e0 429 Gene3D G3DSA:3.50.50.60 7 371 2.3E-100 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_08815 060bb7facc33099ef0d2eede00a461e0 429 Pfam PF01494 FAD binding domain 5 366 4.2E-18 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 C3Y93_08815 060bb7facc33099ef0d2eede00a461e0 429 Gene3D G3DSA:3.30.9.30 40 379 2.3E-100 T 14-10-2018 C3Y93_11225 3b5edcddbdf654beb2550463f25eb06c 390 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 C3Y93_11225 3b5edcddbdf654beb2550463f25eb06c 390 Pfam PF00108 Thiolase, N-terminal domain 9 257 2.1E-74 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 C3Y93_11225 3b5edcddbdf654beb2550463f25eb06c 390 SUPERFAMILY SSF53901 266 389 2.58E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_11225 3b5edcddbdf654beb2550463f25eb06c 390 PIRSF PIRSF000429 3 390 3.5E-126 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3Y93_11225 3b5edcddbdf654beb2550463f25eb06c 390 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 8 390 6.1E-194 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 C3Y93_11225 3b5edcddbdf654beb2550463f25eb06c 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 388 1.2E-131 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3Y93_11225 3b5edcddbdf654beb2550463f25eb06c 390 SUPERFAMILY SSF53901 5 262 1.15E-73 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_11225 3b5edcddbdf654beb2550463f25eb06c 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 C3Y93_11225 3b5edcddbdf654beb2550463f25eb06c 390 ProSitePatterns PS00099 Thiolases active site. 371 384 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 C3Y93_11225 3b5edcddbdf654beb2550463f25eb06c 390 Gene3D G3DSA:3.40.47.10 9 271 1.2E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_11225 3b5edcddbdf654beb2550463f25eb06c 390 Pfam PF02803 Thiolase, C-terminal domain 265 389 2.2E-48 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 C3Y93_11225 3b5edcddbdf654beb2550463f25eb06c 390 Gene3D G3DSA:3.40.47.10 138 384 1.2E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_11225 3b5edcddbdf654beb2550463f25eb06c 390 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 6 390 62.089 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 C3Y93_10640 b34f196f0047a3200c704f817cfcc4a9 176 Hamap MF_00163 Peptide deformylase [def]. 2 163 31.079 T 14-10-2018 IPR023635 Peptide deformylase C3Y93_10640 b34f196f0047a3200c704f817cfcc4a9 176 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 161 2.1E-58 T 14-10-2018 IPR023635 Peptide deformylase C3Y93_10640 b34f196f0047a3200c704f817cfcc4a9 176 PRINTS PR01576 Peptide deformylase signature 33 62 4.4E-37 T 14-10-2018 IPR023635 Peptide deformylase C3Y93_10640 b34f196f0047a3200c704f817cfcc4a9 176 PRINTS PR01576 Peptide deformylase signature 102 120 4.4E-37 T 14-10-2018 IPR023635 Peptide deformylase C3Y93_10640 b34f196f0047a3200c704f817cfcc4a9 176 PRINTS PR01576 Peptide deformylase signature 121 150 4.4E-37 T 14-10-2018 IPR023635 Peptide deformylase C3Y93_10640 b34f196f0047a3200c704f817cfcc4a9 176 PRINTS PR01576 Peptide deformylase signature 90 101 4.4E-37 T 14-10-2018 IPR023635 Peptide deformylase C3Y93_10640 b34f196f0047a3200c704f817cfcc4a9 176 PIRSF PIRSF004749 1 175 2.2E-57 T 14-10-2018 IPR023635 Peptide deformylase C3Y93_10640 b34f196f0047a3200c704f817cfcc4a9 176 Gene3D G3DSA:3.90.45.10 1 168 2.2E-65 T 14-10-2018 IPR036821 Peptide deformylase superfamily C3Y93_10640 b34f196f0047a3200c704f817cfcc4a9 176 Pfam PF01327 Polypeptide deformylase 5 153 6.0E-52 T 14-10-2018 IPR023635 Peptide deformylase C3Y93_10640 b34f196f0047a3200c704f817cfcc4a9 176 SUPERFAMILY SSF56420 2 165 6.15E-62 T 14-10-2018 IPR036821 Peptide deformylase superfamily C3Y93_02540 6194ea7541ba397fcc8d986b751885cf 247 SUPERFAMILY SSF51735 3 203 2.35E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_02540 6194ea7541ba397fcc8d986b751885cf 247 Pfam PF00106 short chain dehydrogenase 3 194 3.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02540 6194ea7541ba397fcc8d986b751885cf 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02540 6194ea7541ba397fcc8d986b751885cf 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02540 6194ea7541ba397fcc8d986b751885cf 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02540 6194ea7541ba397fcc8d986b751885cf 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02540 6194ea7541ba397fcc8d986b751885cf 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02540 6194ea7541ba397fcc8d986b751885cf 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 0.01 T 14-10-2018 C3Y93_02540 6194ea7541ba397fcc8d986b751885cf 247 Gene3D G3DSA:3.40.50.720 2 223 2.5E-54 T 14-10-2018 C3Y93_02540 6194ea7541ba397fcc8d986b751885cf 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 7.5E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02540 6194ea7541ba397fcc8d986b751885cf 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 7.5E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02540 6194ea7541ba397fcc8d986b751885cf 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 7.5E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_05895 e7f68470a516ff57238efcea46b55a32 339 Pfam PF00146 NADH dehydrogenase 24 329 4.7E-119 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05895 e7f68470a516ff57238efcea46b55a32 339 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 17 336 24.034 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05895 e7f68470a516ff57238efcea46b55a32 339 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 218 231 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05895 e7f68470a516ff57238efcea46b55a32 339 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 63 78 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_11505 c1e51de54e810fe15f6acf359f2ec0cd 412 Pfam PF01544 CorA-like Mg2+ transporter protein 29 359 1.3E-41 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 C3Y93_11505 c1e51de54e810fe15f6acf359f2ec0cd 412 SUPERFAMILY SSF143865 16 296 2.22E-16 T 14-10-2018 C3Y93_11505 c1e51de54e810fe15f6acf359f2ec0cd 412 SUPERFAMILY SSF144083 298 360 5.1E-19 T 14-10-2018 C3Y93_11505 c1e51de54e810fe15f6acf359f2ec0cd 412 Gene3D G3DSA:1.20.58.340 286 362 1.8E-24 T 14-10-2018 C3Y93_11505 c1e51de54e810fe15f6acf359f2ec0cd 412 Gene3D G3DSA:3.30.460.20 10 152 3.3E-5 T 14-10-2018 C3Y93_04960 cde2ab0baa1d414b60e9d47878d4b4eb 248 Pfam PF00318 Ribosomal protein S2 11 226 2.8E-93 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_04960 cde2ab0baa1d414b60e9d47878d4b4eb 248 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 C3Y93_04960 cde2ab0baa1d414b60e9d47878d4b4eb 248 PRINTS PR00395 Ribosomal protein S2 signature 177 188 6.5E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_04960 cde2ab0baa1d414b60e9d47878d4b4eb 248 PRINTS PR00395 Ribosomal protein S2 signature 198 212 6.5E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_04960 cde2ab0baa1d414b60e9d47878d4b4eb 248 PRINTS PR00395 Ribosomal protein S2 signature 89 106 6.5E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_04960 cde2ab0baa1d414b60e9d47878d4b4eb 248 PRINTS PR00395 Ribosomal protein S2 signature 8 26 6.5E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_04960 cde2ab0baa1d414b60e9d47878d4b4eb 248 PRINTS PR00395 Ribosomal protein S2 signature 160 177 6.5E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_04960 cde2ab0baa1d414b60e9d47878d4b4eb 248 PRINTS PR00395 Ribosomal protein S2 signature 39 48 6.5E-36 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_04960 cde2ab0baa1d414b60e9d47878d4b4eb 248 SUPERFAMILY SSF52313 8 234 1.44E-92 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily C3Y93_04960 cde2ab0baa1d414b60e9d47878d4b4eb 248 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 227 40.745 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_04960 cde2ab0baa1d414b60e9d47878d4b4eb 248 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 6 228 3.8E-102 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_04960 cde2ab0baa1d414b60e9d47878d4b4eb 248 Gene3D G3DSA:3.40.50.10490 11 221 9.6E-91 T 14-10-2018 C3Y93_04960 cde2ab0baa1d414b60e9d47878d4b4eb 248 Gene3D G3DSA:1.10.287.610 105 152 9.6E-91 T 14-10-2018 C3Y93_04960 cde2ab0baa1d414b60e9d47878d4b4eb 248 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 160 184 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 C3Y93_03165 3b98842be92d5a34ce8fd6b6b5af1660 216 SUPERFAMILY SSF48498 95 212 5.34E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C3Y93_03165 3b98842be92d5a34ce8fd6b6b5af1660 216 Gene3D G3DSA:1.10.357.10 90 216 1.7E-19 T 14-10-2018 C3Y93_03165 3b98842be92d5a34ce8fd6b6b5af1660 216 SUPERFAMILY SSF46689 16 93 8.21E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_03165 3b98842be92d5a34ce8fd6b6b5af1660 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 1.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_03165 3b98842be92d5a34ce8fd6b6b5af1660 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 1.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_03165 3b98842be92d5a34ce8fd6b6b5af1660 216 Gene3D G3DSA:1.10.10.60 5 73 1.2E-22 T 14-10-2018 C3Y93_03165 3b98842be92d5a34ce8fd6b6b5af1660 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 73 2.2E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_01585 8a56d59765953e065420338fcd507aff 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 C3Y93_01585 8a56d59765953e065420338fcd507aff 240 Gene3D G3DSA:3.30.70.580 65 231 1.9E-49 T 14-10-2018 C3Y93_01585 8a56d59765953e065420338fcd507aff 240 SUPERFAMILY SSF55174 3 91 1.83E-10 T 14-10-2018 C3Y93_01585 8a56d59765953e065420338fcd507aff 240 Gene3D G3DSA:3.30.70.1560 132 213 1.9E-49 T 14-10-2018 C3Y93_01585 8a56d59765953e065420338fcd507aff 240 SUPERFAMILY SSF55120 64 230 3.52E-35 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_01585 8a56d59765953e065420338fcd507aff 240 Pfam PF00849 RNA pseudouridylate synthase 65 196 3.8E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_01585 8a56d59765953e065420338fcd507aff 240 Pfam PF01479 S4 domain 3 42 5.3E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_01585 8a56d59765953e065420338fcd507aff 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 228 1.8E-38 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 C3Y93_01585 8a56d59765953e065420338fcd507aff 240 Gene3D G3DSA:3.10.290.10 1 60 2.7E-8 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3Y93_01585 8a56d59765953e065420338fcd507aff 240 SMART SM00363 1 67 7.3E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_02705 9d6ddfd3b45408e8815d25b1a37abd00 259 SUPERFAMILY SSF53474 1 257 3.87E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_02705 9d6ddfd3b45408e8815d25b1a37abd00 259 Pfam PF00561 alpha/beta hydrolase fold 22 242 2.5E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_02705 9d6ddfd3b45408e8815d25b1a37abd00 259 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 11 258 1.9E-93 T 14-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 C3Y93_02705 9d6ddfd3b45408e8815d25b1a37abd00 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 5.2E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_02705 9d6ddfd3b45408e8815d25b1a37abd00 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 5.2E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_02705 9d6ddfd3b45408e8815d25b1a37abd00 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 5.2E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_02705 9d6ddfd3b45408e8815d25b1a37abd00 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 5.2E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_02705 9d6ddfd3b45408e8815d25b1a37abd00 259 Gene3D G3DSA:3.40.50.1820 1 258 1.2E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_01615 521fbc0013b11a4932651bdd19084a7f 314 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 307 28.414 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 C3Y93_01615 521fbc0013b11a4932651bdd19084a7f 314 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 297 8.2E-85 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 C3Y93_01615 521fbc0013b11a4932651bdd19084a7f 314 SUPERFAMILY SSF52540 8 144 1.11E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01615 521fbc0013b11a4932651bdd19084a7f 314 SUPERFAMILY SSF52540 6 234 9.87E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01615 521fbc0013b11a4932651bdd19084a7f 314 Gene3D G3DSA:3.40.50.300 11 295 7.7E-91 T 14-10-2018 C3Y93_01615 521fbc0013b11a4932651bdd19084a7f 314 Pfam PF01715 IPP transferase 41 291 1.1E-78 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 C3Y93_01615 521fbc0013b11a4932651bdd19084a7f 314 Gene3D G3DSA:1.10.20.140 114 186 7.7E-91 T 14-10-2018 C3Y93_13930 d8fc0647b5109ef53ac654e4c8a7dc5a 310 SUPERFAMILY SSF52402 2 186 8.37E-57 T 14-10-2018 C3Y93_13930 d8fc0647b5109ef53ac654e4c8a7dc5a 310 Pfam PF01012 Electron transfer flavoprotein domain 4 169 1.1E-40 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 C3Y93_13930 d8fc0647b5109ef53ac654e4c8a7dc5a 310 SUPERFAMILY SSF52467 189 309 1.37E-44 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C3Y93_13930 d8fc0647b5109ef53ac654e4c8a7dc5a 310 SMART SM00893 3 182 3.8E-53 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 C3Y93_13930 d8fc0647b5109ef53ac654e4c8a7dc5a 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 C3Y93_13930 d8fc0647b5109ef53ac654e4c8a7dc5a 310 PIRSF PIRSF000089 1 310 4.6E-102 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 C3Y93_13930 d8fc0647b5109ef53ac654e4c8a7dc5a 310 Gene3D G3DSA:3.40.50.1220 184 310 3.0E-54 T 14-10-2018 C3Y93_13930 d8fc0647b5109ef53ac654e4c8a7dc5a 310 Gene3D G3DSA:3.40.50.620 2 183 1.4E-54 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_13930 d8fc0647b5109ef53ac654e4c8a7dc5a 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 2.8E-34 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 C3Y93_00760 fe0c28f464b70b57282fa3ad1f6803ab 483 Gene3D G3DSA:3.30.750.24 391 483 6.0E-25 T 14-10-2018 IPR036513 STAS domain superfamily C3Y93_00760 fe0c28f464b70b57282fa3ad1f6803ab 483 Pfam PF00916 Sulfate permease family 165 347 5.5E-28 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 C3Y93_00760 fe0c28f464b70b57282fa3ad1f6803ab 483 Pfam PF00916 Sulfate permease family 14 143 5.8E-25 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 C3Y93_00760 fe0c28f464b70b57282fa3ad1f6803ab 483 SUPERFAMILY SSF52091 399 480 2.16E-11 T 14-10-2018 IPR036513 STAS domain superfamily C3Y93_00760 fe0c28f464b70b57282fa3ad1f6803ab 483 Pfam PF01740 STAS domain 405 479 4.2E-8 T 14-10-2018 IPR002645 STAS domain C3Y93_09880 796a036e6d391debbb741947b2757141 428 Gene3D G3DSA:1.10.530.10 89 341 1.3E-81 T 14-10-2018 C3Y93_09880 796a036e6d391debbb741947b2757141 428 Gene3D G3DSA:1.10.101.10 351 422 1.5E-8 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 C3Y93_09880 796a036e6d391debbb741947b2757141 428 SUPERFAMILY SSF47090 351 423 6.87E-14 T 14-10-2018 IPR036365 PGBD-like superfamily C3Y93_09880 796a036e6d391debbb741947b2757141 428 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 47 345 2.0E-108 T 14-10-2018 IPR011970 Lytic murein transglycosylase C3Y93_09880 796a036e6d391debbb741947b2757141 428 Pfam PF01471 Putative peptidoglycan binding domain 363 417 5.9E-10 T 14-10-2018 IPR002477 Peptidoglycan binding-like C3Y93_09880 796a036e6d391debbb741947b2757141 428 SUPERFAMILY SSF53955 44 347 9.56E-94 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3Y93_09880 796a036e6d391debbb741947b2757141 428 Gene3D G3DSA:1.10.8.350 61 222 1.3E-81 T 14-10-2018 C3Y93_09880 796a036e6d391debbb741947b2757141 428 Pfam PF13406 Transglycosylase SLT domain 47 342 6.7E-104 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 C3Y93_10480 c5ed8b4bacabacbbb64a720fa7da3c63 435 Pfam PF01593 Flavin containing amine oxidoreductase 13 277 1.3E-16 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 C3Y93_10480 c5ed8b4bacabacbbb64a720fa7da3c63 435 SUPERFAMILY SSF51905 3 412 1.0E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_10480 c5ed8b4bacabacbbb64a720fa7da3c63 435 Gene3D G3DSA:3.50.50.60 2 279 4.3E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_11130 e1cd1c0123e8c64a90a33f5e99b64625 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 24.289 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_11130 e1cd1c0123e8c64a90a33f5e99b64625 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 5.1E-16 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_11130 e1cd1c0123e8c64a90a33f5e99b64625 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 5.4E-31 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_11130 e1cd1c0123e8c64a90a33f5e99b64625 123 Gene3D G3DSA:1.20.5.710 2 52 3.9E-18 T 14-10-2018 C3Y93_11130 e1cd1c0123e8c64a90a33f5e99b64625 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 1.4E-45 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_11130 e1cd1c0123e8c64a90a33f5e99b64625 123 SUPERFAMILY SSF54736 52 123 1.38E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like C3Y93_11130 e1cd1c0123e8c64a90a33f5e99b64625 123 Gene3D G3DSA:3.30.1390.10 53 123 2.8E-31 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like C3Y93_11130 e1cd1c0123e8c64a90a33f5e99b64625 123 SUPERFAMILY SSF48300 4 59 3.01E-15 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_11130 e1cd1c0123e8c64a90a33f5e99b64625 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 101 7.0E-15 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_08160 80439c44541248dd2d0bcb80af38ee4d 700 SMART SM00954 235 345 2.6E-6 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 C3Y93_08160 80439c44541248dd2d0bcb80af38ee4d 700 Pfam PF02824 TGS domain 381 440 3.7E-14 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 C3Y93_08160 80439c44541248dd2d0bcb80af38ee4d 700 Pfam PF13328 HD domain 32 178 4.5E-41 T 14-10-2018 IPR003607 HD/PDEase domain C3Y93_08160 80439c44541248dd2d0bcb80af38ee4d 700 SUPERFAMILY SSF81301 198 352 1.01E-18 T 14-10-2018 C3Y93_08160 80439c44541248dd2d0bcb80af38ee4d 700 SUPERFAMILY SSF81271 381 440 1.29E-12 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 C3Y93_08160 80439c44541248dd2d0bcb80af38ee4d 700 Gene3D G3DSA:3.30.460.10 197 325 9.5E-7 T 14-10-2018 C3Y93_08160 80439c44541248dd2d0bcb80af38ee4d 700 SMART SM00471 47 157 3.7E-10 T 14-10-2018 IPR003607 HD/PDEase domain C3Y93_08160 80439c44541248dd2d0bcb80af38ee4d 700 SUPERFAMILY SSF109604 13 194 2.77E-60 T 14-10-2018 C3Y93_08160 80439c44541248dd2d0bcb80af38ee4d 700 Gene3D G3DSA:3.10.20.30 375 445 4.9E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3Y93_08160 80439c44541248dd2d0bcb80af38ee4d 700 Gene3D G3DSA:1.10.3210.10 4 195 6.9E-67 T 14-10-2018 C3Y93_01750 9278c3b064847fb99b493b6b29fd09bd 230 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 218 4.0E-71 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 C3Y93_01750 9278c3b064847fb99b493b6b29fd09bd 230 Pfam PF02224 Cytidylate kinase 6 222 1.0E-65 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 C3Y93_01750 9278c3b064847fb99b493b6b29fd09bd 230 Hamap MF_00238 Cytidylate kinase [cmk]. 4 225 32.095 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 C3Y93_01750 9278c3b064847fb99b493b6b29fd09bd 230 Gene3D G3DSA:3.40.50.300 1 230 2.3E-77 T 14-10-2018 C3Y93_01750 9278c3b064847fb99b493b6b29fd09bd 230 SUPERFAMILY SSF52540 4 225 4.87E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_08010 5c13adb821ef5c4a7bdf663f89c9a6a3 208 SUPERFAMILY SSF53335 17 188 3.41E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_08010 5c13adb821ef5c4a7bdf663f89c9a6a3 208 Pfam PF08241 Methyltransferase domain 40 132 1.4E-18 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C3Y93_08010 5c13adb821ef5c4a7bdf663f89c9a6a3 208 Gene3D G3DSA:3.40.50.150 14 202 4.7E-24 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 SUPERFAMILY SSF50249 255 362 4.55E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 SUPERFAMILY SSF50249 2 112 6.56E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 PIRSF PIRSF002111 1 534 7.2E-213 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 Gene3D G3DSA:2.40.50.140 5 99 3.8E-17 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 Gene3D G3DSA:2.40.50.140 100 183 6.2E-9 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 4.9E-211 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 Gene3D G3DSA:2.40.50.140 269 357 1.5E-28 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 Gene3D G3DSA:2.40.50.140 358 444 3.3E-25 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 SUPERFAMILY SSF50249 103 184 8.58E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 PRINTS PR00681 Ribosomal protein S1 signature 108 124 5.5E-87 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 PRINTS PR00681 Ribosomal protein S1 signature 290 309 5.5E-87 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 PRINTS PR00681 Ribosomal protein S1 signature 39 53 5.5E-87 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 PRINTS PR00681 Ribosomal protein S1 signature 155 175 5.5E-87 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 PRINTS PR00681 Ribosomal protein S1 signature 126 143 5.5E-87 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 PRINTS PR00681 Ribosomal protein S1 signature 21 39 5.5E-87 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 PRINTS PR00681 Ribosomal protein S1 signature 84 103 5.5E-87 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 PRINTS PR00681 Ribosomal protein S1 signature 212 233 5.5E-87 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 PRINTS PR00681 Ribosomal protein S1 signature 330 348 5.5E-87 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 Gene3D G3DSA:2.40.50.140 445 528 4.4E-20 T 14-10-2018 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 SUPERFAMILY SSF50249 342 440 1.27E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 Pfam PF00575 S1 RNA binding domain 361 434 9.1E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 Pfam PF00575 S1 RNA binding domain 102 171 4.6E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 Pfam PF00575 S1 RNA binding domain 189 260 1.5E-22 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 Pfam PF00575 S1 RNA binding domain 18 86 4.3E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 Pfam PF00575 S1 RNA binding domain 450 520 1.9E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 SMART SM00316 449 520 6.7E-20 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 SMART SM00316 275 347 1.9E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 SMART SM00316 362 434 7.9E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 SMART SM00316 103 171 3.8E-11 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 SMART SM00316 19 87 5.0E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 SMART SM00316 190 260 4.1E-30 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 SUPERFAMILY SSF50249 189 277 2.54E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 SUPERFAMILY SSF50249 429 533 2.24E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_01755 c63e99a496391bf05ec0456e57133b13 558 Gene3D G3DSA:2.40.50.140 187 268 1.7E-29 T 14-10-2018 C3Y93_05910 c967f31bdd601b9797eaae29411617a6 169 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 24 168 2.8E-46 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05910 c967f31bdd601b9797eaae29411617a6 169 SUPERFAMILY SSF52833 18 168 2.12E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_05910 c967f31bdd601b9797eaae29411617a6 169 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 26 168 6.7E-46 T 14-10-2018 C3Y93_05910 c967f31bdd601b9797eaae29411617a6 169 Gene3D G3DSA:1.10.10.1590 16 85 1.0E-14 T 14-10-2018 C3Y93_05910 c967f31bdd601b9797eaae29411617a6 169 PIRSF PIRSF000216 5 169 2.9E-48 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05910 c967f31bdd601b9797eaae29411617a6 169 Gene3D G3DSA:3.40.30.10 86 168 3.1E-23 T 14-10-2018 C3Y93_05910 c967f31bdd601b9797eaae29411617a6 169 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 126 144 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_12780 32567da31155f84da334fe24dfb09923 349 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 225 346 1.0E-45 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 C3Y93_12780 32567da31155f84da334fe24dfb09923 349 SMART SM00771 210 338 3.7E-33 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 C3Y93_12780 32567da31155f84da334fe24dfb09923 349 SUPERFAMILY SSF64383 211 342 5.23E-26 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 C3Y93_12780 32567da31155f84da334fe24dfb09923 349 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 213 337 2.8E-28 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 C3Y93_12780 32567da31155f84da334fe24dfb09923 349 Gene3D G3DSA:3.30.1400.10 209 346 7.7E-30 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 C3Y93_13450 ba8635b7a360b910a4c0f3dca513e50e 609 PIRSF PIRSF001348 1 609 1.6E-271 T 14-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 C3Y93_13450 ba8635b7a360b910a4c0f3dca513e50e 609 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 6 607 50.796 T 14-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 C3Y93_13450 ba8635b7a360b910a4c0f3dca513e50e 609 SUPERFAMILY SSF53795 241 605 5.26E-155 T 14-10-2018 C3Y93_13450 ba8635b7a360b910a4c0f3dca513e50e 609 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 265 273 - T 14-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 C3Y93_13450 ba8635b7a360b910a4c0f3dca513e50e 609 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 241 602 1.6E-167 T 14-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 C3Y93_13450 ba8635b7a360b910a4c0f3dca513e50e 609 Gene3D G3DSA:3.40.449.10 17 240 3.6E-261 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 C3Y93_13450 ba8635b7a360b910a4c0f3dca513e50e 609 SUPERFAMILY SSF68923 4 240 7.85E-99 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 C3Y93_13450 ba8635b7a360b910a4c0f3dca513e50e 609 Gene3D G3DSA:2.170.8.10 53 394 3.6E-261 T 14-10-2018 C3Y93_13450 ba8635b7a360b910a4c0f3dca513e50e 609 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 18 237 1.8E-101 T 14-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 C3Y93_13450 ba8635b7a360b910a4c0f3dca513e50e 609 Gene3D G3DSA:3.90.228.20 241 599 3.6E-261 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 Gene3D G3DSA:3.40.120.10 1 154 1.1E-45 T 14-10-2018 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 SUPERFAMILY SSF53738 156 255 2.16E-32 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 362 1.1E-30 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 384 439 4.9E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 Gene3D G3DSA:3.30.310.50 367 443 1.4E-20 T 14-10-2018 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 1.4E-19 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 3.3E-40 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 Gene3D G3DSA:3.40.120.10 257 336 9.7E-65 T 14-10-2018 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 SUPERFAMILY SSF53738 2 181 3.45E-46 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 6.2E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 6.2E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 6.2E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 SUPERFAMILY SSF55957 355 441 1.44E-20 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 439 1.7E-182 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 441 45.583 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 SUPERFAMILY SSF53738 258 363 1.53E-27 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_09160 b5176d6495534731cb2a6e444b1f9f4c 443 Gene3D G3DSA:3.40.120.10 175 359 9.7E-65 T 14-10-2018 C3Y93_07365 34c0b2afb732981279cb83a67b30878e 444 Gene3D G3DSA:3.40.50.1820 22 309 3.6E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_07365 34c0b2afb732981279cb83a67b30878e 444 SUPERFAMILY SSF53474 36 307 8.04E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_07365 34c0b2afb732981279cb83a67b30878e 444 Pfam PF00561 alpha/beta hydrolase fold 59 293 1.0E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_12460 22aaf40ceb45b2238778e0eff16eea87 142 SUPERFAMILY SSF101738 7 119 3.01E-48 T 14-10-2018 IPR036760 SspB-like superfamily C3Y93_12460 22aaf40ceb45b2238778e0eff16eea87 142 PIRSF PIRSF005276 5 142 1.3E-53 T 14-10-2018 IPR007481 Stringent starvation protein B C3Y93_12460 22aaf40ceb45b2238778e0eff16eea87 142 Gene3D G3DSA:2.30.30.220 4 134 1.8E-51 T 14-10-2018 IPR036760 SspB-like superfamily C3Y93_12460 22aaf40ceb45b2238778e0eff16eea87 142 Pfam PF04386 Stringent starvation protein B 11 134 2.0E-37 T 14-10-2018 IPR007481 Stringent starvation protein B C3Y93_09345 992b23b726b924e09b12dd06dcf4666a 194 Gene3D G3DSA:3.40.50.1820 1 192 5.0E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_09345 992b23b726b924e09b12dd06dcf4666a 194 SUPERFAMILY SSF53474 3 192 6.43E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_09345 992b23b726b924e09b12dd06dcf4666a 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 3 189 1.4E-42 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA C3Y93_00190 5479bd39c9532c4f5713c36fe81f3394 277 SUPERFAMILY SSF56752 3 269 9.68E-54 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 C3Y93_00190 5479bd39c9532c4f5713c36fe81f3394 277 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 6 267 1.1E-64 T 14-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 C3Y93_00190 5479bd39c9532c4f5713c36fe81f3394 277 Gene3D G3DSA:3.30.470.10 3 107 3.5E-21 T 14-10-2018 C3Y93_00190 5479bd39c9532c4f5713c36fe81f3394 277 Pfam PF01063 Amino-transferase class IV 25 249 8.5E-40 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 C3Y93_00190 5479bd39c9532c4f5713c36fe81f3394 277 Gene3D G3DSA:3.20.10.10 131 268 1.2E-37 T 14-10-2018 C3Y93_08225 d2a70c48e4e07dceef88db8393c31030 186 Gene3D G3DSA:3.10.310.50 34 182 1.2E-42 T 14-10-2018 C3Y93_08225 d2a70c48e4e07dceef88db8393c31030 186 Pfam PF04536 TPM domain 39 161 9.4E-14 T 14-10-2018 IPR007621 TPM domain C3Y93_11965 8e0f064b6a02137d9e564c8d3fbcb283 311 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 11 301 6.4E-68 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C3Y93_11965 8e0f064b6a02137d9e564c8d3fbcb283 311 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 9 311 41.704 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 C3Y93_11965 8e0f064b6a02137d9e564c8d3fbcb283 311 PIRSF PIRSF026649 8 311 1.3E-85 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C3Y93_05370 aeb3f3e8bde45f43d0bf730fbf4dbd4c 376 TIGRFAM TIGR00341 TIGR00341: TIGR00341 family protein 56 261 6.5E-28 T 14-10-2018 C3Y93_05370 aeb3f3e8bde45f43d0bf730fbf4dbd4c 376 Pfam PF04087 Domain of unknown function (DUF389) 86 221 7.0E-30 T 14-10-2018 IPR005240 Protein of unknown function DUF389 C3Y93_13465 ade655e40808a0600c079ffa46550af0 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 4 28 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 C3Y93_13465 ade655e40808a0600c079ffa46550af0 96 SMART SM00883 3 94 7.6E-58 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3Y93_13465 ade655e40808a0600c079ffa46550af0 96 Hamap MF_00580 10 kDa chaperonin [groS]. 3 95 27.044 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3Y93_13465 ade655e40808a0600c079ffa46550af0 96 SUPERFAMILY SSF50129 2 95 3.53E-34 T 14-10-2018 IPR011032 GroES-like superfamily C3Y93_13465 ade655e40808a0600c079ffa46550af0 96 PRINTS PR00297 10kDa chaperonin signature 26 47 1.0E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3Y93_13465 ade655e40808a0600c079ffa46550af0 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.0E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3Y93_13465 ade655e40808a0600c079ffa46550af0 96 PRINTS PR00297 10kDa chaperonin signature 4 19 1.0E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3Y93_13465 ade655e40808a0600c079ffa46550af0 96 PRINTS PR00297 10kDa chaperonin signature 81 94 1.0E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3Y93_13465 ade655e40808a0600c079ffa46550af0 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 93 6.7E-35 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C3Y93_13465 ade655e40808a0600c079ffa46550af0 96 Gene3D G3DSA:2.30.33.40 1 96 5.1E-37 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 C3Y93_04410 8c2b20da78323a572d76c84defa13038 299 PRINTS PR00502 NUDIX hydrolase family signature 34 48 4.7E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C3Y93_04410 8c2b20da78323a572d76c84defa13038 299 PRINTS PR00502 NUDIX hydrolase family signature 48 63 4.7E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C3Y93_04410 8c2b20da78323a572d76c84defa13038 299 Gene3D G3DSA:3.20.20.70 147 299 2.5E-24 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_04410 8c2b20da78323a572d76c84defa13038 299 Pfam PF00293 NUDIX domain 8 124 1.1E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3Y93_04410 8c2b20da78323a572d76c84defa13038 299 Gene3D G3DSA:3.90.79.10 1 130 1.3E-25 T 14-10-2018 C3Y93_04410 8c2b20da78323a572d76c84defa13038 299 SUPERFAMILY SSF51391 171 299 3.4E-22 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C3Y93_04410 8c2b20da78323a572d76c84defa13038 299 Pfam PF02581 Thiamine monophosphate synthase 175 298 3.2E-17 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C3Y93_04410 8c2b20da78323a572d76c84defa13038 299 SUPERFAMILY SSF55811 3 126 3.52E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3Y93_04410 8c2b20da78323a572d76c84defa13038 299 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C3Y93_07270 a1fe41f125901e873b3b3d6e816c8c5b 133 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 19 126 24.131 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS C3Y93_07270 a1fe41f125901e873b3b3d6e816c8c5b 133 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 29 125 4.1E-35 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS C3Y93_07270 a1fe41f125901e873b3b3d6e816c8c5b 133 Gene3D G3DSA:3.30.460.10 18 129 1.5E-35 T 14-10-2018 C3Y93_07270 a1fe41f125901e873b3b3d6e816c8c5b 133 Pfam PF02410 Ribosomal silencing factor during starvation 31 125 4.8E-25 T 14-10-2018 C3Y93_07270 a1fe41f125901e873b3b3d6e816c8c5b 133 SUPERFAMILY SSF81301 24 129 3.43E-35 T 14-10-2018 C3Y93_01855 d0cc519c246a63f6436490294e7340fc 264 Pfam PF00557 Metallopeptidase family M24 15 245 4.3E-53 T 14-10-2018 IPR000994 Peptidase M24 C3Y93_01855 d0cc519c246a63f6436490294e7340fc 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 171 189 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3Y93_01855 d0cc519c246a63f6436490294e7340fc 264 SUPERFAMILY SSF55920 7 257 1.11E-91 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like C3Y93_01855 d0cc519c246a63f6436490294e7340fc 264 Hamap MF_01974 Methionine aminopeptidase [map]. 6 254 40.785 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3Y93_01855 d0cc519c246a63f6436490294e7340fc 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 7 252 1.3E-97 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3Y93_01855 d0cc519c246a63f6436490294e7340fc 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 3.7E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3Y93_01855 d0cc519c246a63f6436490294e7340fc 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 3.7E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3Y93_01855 d0cc519c246a63f6436490294e7340fc 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 3.7E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3Y93_01855 d0cc519c246a63f6436490294e7340fc 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 72 85 3.7E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3Y93_01855 d0cc519c246a63f6436490294e7340fc 264 Gene3D G3DSA:3.90.230.10 4 256 1.8E-106 T 14-10-2018 C3Y93_09790 2df11628ce1924905530a52048b5bb57 451 SUPERFAMILY SSF116878 121 451 2.22E-49 T 14-10-2018 C3Y93_09790 2df11628ce1924905530a52048b5bb57 451 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 451 32.418 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 C3Y93_09790 2df11628ce1924905530a52048b5bb57 451 Gene3D G3DSA:3.40.50.300 217 379 2.4E-102 T 14-10-2018 C3Y93_09790 2df11628ce1924905530a52048b5bb57 451 SUPERFAMILY SSF52540 72 370 1.81E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_09790 2df11628ce1924905530a52048b5bb57 451 Gene3D G3DSA:1.20.120.430 122 451 2.4E-102 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 C3Y93_09790 2df11628ce1924905530a52048b5bb57 451 Gene3D G3DSA:3.30.1360.120 1 121 2.9E-40 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 C3Y93_09790 2df11628ce1924905530a52048b5bb57 451 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 1.7E-36 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 C3Y93_09790 2df11628ce1924905530a52048b5bb57 451 Pfam PF12631 MnmE helical domain 123 448 1.2E-56 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 C3Y93_09790 2df11628ce1924905530a52048b5bb57 451 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 451 3.4E-104 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 C3Y93_09790 2df11628ce1924905530a52048b5bb57 451 Pfam PF01926 50S ribosome-binding GTPase 218 312 1.1E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_09790 2df11628ce1924905530a52048b5bb57 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 6.5E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_09790 2df11628ce1924905530a52048b5bb57 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 286 304 6.5E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_09790 2df11628ce1924905530a52048b5bb57 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 218 370 1.3E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3Y93_10525 8d892b3feb965eff687a89ad6dbc2c5e 206 Pfam PF01810 LysE type translocator 16 201 3.6E-32 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 C3Y93_10525 8d892b3feb965eff687a89ad6dbc2c5e 206 PIRSF PIRSF006324 1 206 1.8E-46 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SUPERFAMILY SSF53955 130 288 9.23E-42 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Gene3D G3DSA:3.10.350.10 728 776 8.2E-8 T 14-10-2018 IPR036779 LysM domain superfamily C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SUPERFAMILY SSF54106 597 641 8.5E-9 T 14-10-2018 C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Gene3D G3DSA:3.10.350.10 588 648 1.5E-12 T 14-10-2018 IPR036779 LysM domain superfamily C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Gene3D G3DSA:3.10.350.10 649 718 1.1E-12 T 14-10-2018 IPR036779 LysM domain superfamily C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Gene3D G3DSA:3.10.350.10 857 913 5.8E-13 T 14-10-2018 IPR036779 LysM domain superfamily C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Gene3D G3DSA:3.10.350.10 914 980 1.8E-12 T 14-10-2018 IPR036779 LysM domain superfamily C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Gene3D G3DSA:3.10.350.10 1040 1089 2.4E-12 T 14-10-2018 IPR036779 LysM domain superfamily C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Gene3D G3DSA:3.10.350.10 787 856 1.0E-14 T 14-10-2018 IPR036779 LysM domain superfamily C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Gene3D G3DSA:3.10.350.10 981 1039 2.8E-16 T 14-10-2018 IPR036779 LysM domain superfamily C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SUPERFAMILY SSF54106 1042 1087 2.22E-8 T 14-10-2018 C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SUPERFAMILY SSF54106 730 777 1.31E-5 T 14-10-2018 C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SUPERFAMILY SSF54106 860 903 4.58E-9 T 14-10-2018 C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SUPERFAMILY SSF54106 661 704 9.81E-8 T 14-10-2018 C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SMART SM00257 808 852 2.9E-13 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SMART SM00257 1043 1087 7.1E-11 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SMART SM00257 860 904 6.6E-12 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SMART SM00257 661 705 5.9E-11 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SMART SM00257 598 642 2.2E-8 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SMART SM00257 994 1038 1.7E-14 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SMART SM00257 731 776 0.0039 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SMART SM00257 924 968 4.7E-10 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 151 179 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Pfam PF01464 Transglycosylase SLT domain 138 240 2.4E-24 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SUPERFAMILY SSF54106 924 967 4.71E-8 T 14-10-2018 C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SUPERFAMILY SSF54106 808 852 4.84E-9 T 14-10-2018 C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Pfam PF01476 LysM domain 861 903 4.3E-11 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Pfam PF01476 LysM domain 995 1038 4.5E-11 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Pfam PF01476 LysM domain 662 704 6.8E-10 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Pfam PF01476 LysM domain 809 852 2.5E-12 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Pfam PF01476 LysM domain 1044 1087 9.3E-11 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Pfam PF01476 LysM domain 925 967 1.1E-10 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Pfam PF01476 LysM domain 732 776 2.0E-5 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Pfam PF01476 LysM domain 599 639 1.5E-10 T 14-10-2018 IPR018392 LysM domain C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 Gene3D G3DSA:1.10.530.10 128 276 4.0E-31 T 14-10-2018 C3Y93_05205 8effa37cf76871cd11187f7685f81166 1089 SUPERFAMILY SSF54106 994 1038 2.75E-9 T 14-10-2018 C3Y93_01275 0d6e5a825f7b930d5c301f3da503647f 50 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 2 41 2.3E-21 T 14-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 C3Y93_01275 0d6e5a825f7b930d5c301f3da503647f 50 PIRSF PIRSF037205 1 49 1.8E-24 T 14-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 C3Y93_13220 5a2b7b715a153239a465c600474698b1 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 4.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C3Y93_13220 5a2b7b715a153239a465c600474698b1 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 4.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C3Y93_13220 5a2b7b715a153239a465c600474698b1 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 4.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C3Y93_13220 5a2b7b715a153239a465c600474698b1 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 4.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C3Y93_13220 5a2b7b715a153239a465c600474698b1 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 4.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C3Y93_13220 5a2b7b715a153239a465c600474698b1 163 Pfam PF01467 Cytidylyltransferase-like 7 135 4.9E-23 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C3Y93_13220 5a2b7b715a153239a465c600474698b1 163 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 160 35.362 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C3Y93_13220 5a2b7b715a153239a465c600474698b1 163 Gene3D G3DSA:3.40.50.620 1 163 7.9E-59 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_13220 5a2b7b715a153239a465c600474698b1 163 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 158 8.1E-58 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C3Y93_13220 5a2b7b715a153239a465c600474698b1 163 SUPERFAMILY SSF52374 3 157 1.1E-44 T 14-10-2018 C3Y93_13220 5a2b7b715a153239a465c600474698b1 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 65 3.8E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C3Y93_00360 e844a6fcbb7b2437550a98028d3152b7 510 SUPERFAMILY SSF53383 21 496 1.39E-113 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_00360 e844a6fcbb7b2437550a98028d3152b7 510 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 84 428 7.0E-61 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 C3Y93_00360 e844a6fcbb7b2437550a98028d3152b7 510 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 312 333 - T 14-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 C3Y93_00360 e844a6fcbb7b2437550a98028d3152b7 510 Gene3D G3DSA:3.90.1150.170 47 486 7.1E-128 T 14-10-2018 C3Y93_00360 e844a6fcbb7b2437550a98028d3152b7 510 Gene3D G3DSA:3.40.640.10 113 372 7.1E-128 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_11160 4744e62601ab6071904502b6f8322d79 161 SUPERFAMILY SSF54637 11 156 4.11E-19 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_11160 4744e62601ab6071904502b6f8322d79 161 Gene3D G3DSA:3.10.129.10 9 158 5.5E-29 T 14-10-2018 C3Y93_11160 4744e62601ab6071904502b6f8322d79 161 Pfam PF14539 Domain of unknown function (DUF4442) 13 151 1.6E-16 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 C3Y93_10860 5c041ad01cdad59ccefc3e087ab6a73f 482 SUPERFAMILY SSF53187 163 477 5.96E-122 T 14-10-2018 C3Y93_10860 5c041ad01cdad59ccefc3e087ab6a73f 482 SUPERFAMILY SSF52949 38 157 2.12E-10 T 14-10-2018 C3Y93_10860 5c041ad01cdad59ccefc3e087ab6a73f 482 PRINTS PR00481 Cytosol aminopeptidase signature 355 370 3.1E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C3Y93_10860 5c041ad01cdad59ccefc3e087ab6a73f 482 PRINTS PR00481 Cytosol aminopeptidase signature 305 326 3.1E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C3Y93_10860 5c041ad01cdad59ccefc3e087ab6a73f 482 PRINTS PR00481 Cytosol aminopeptidase signature 246 263 3.1E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C3Y93_10860 5c041ad01cdad59ccefc3e087ab6a73f 482 PRINTS PR00481 Cytosol aminopeptidase signature 268 289 3.1E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C3Y93_10860 5c041ad01cdad59ccefc3e087ab6a73f 482 PRINTS PR00481 Cytosol aminopeptidase signature 327 347 3.1E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C3Y93_10860 5c041ad01cdad59ccefc3e087ab6a73f 482 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 33 135 4.7E-9 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 C3Y93_10860 5c041ad01cdad59ccefc3e087ab6a73f 482 Gene3D G3DSA:3.40.630.10 167 479 9.2E-136 T 14-10-2018 C3Y93_10860 5c041ad01cdad59ccefc3e087ab6a73f 482 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 331 338 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 C3Y93_10860 5c041ad01cdad59ccefc3e087ab6a73f 482 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 168 470 3.4E-122 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 C3Y93_10860 5c041ad01cdad59ccefc3e087ab6a73f 482 Gene3D G3DSA:3.40.220.10 2 166 2.1E-12 T 14-10-2018 C3Y93_10860 5c041ad01cdad59ccefc3e087ab6a73f 482 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 479 35.501 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 C3Y93_12790 1354d41c12797f48bcdec054be76f45b 353 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 253 1.7E-26 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 C3Y93_12790 1354d41c12797f48bcdec054be76f45b 353 SUPERFAMILY SSF51735 8 344 1.21E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_12790 1354d41c12797f48bcdec054be76f45b 353 Gene3D G3DSA:3.40.50.720 2 353 2.3E-90 T 14-10-2018 C3Y93_00310 8844a44d32ea586c6a81589e23dc571d 199 SUPERFAMILY SSF50814 37 194 8.73E-44 T 14-10-2018 IPR012674 Calycin C3Y93_00310 8844a44d32ea586c6a81589e23dc571d 199 PIRSF PIRSF036893 9 199 7.0E-56 T 14-10-2018 IPR022271 Lipocalin, ApoD type C3Y93_00310 8844a44d32ea586c6a81589e23dc571d 199 PRINTS PR01171 Bacterial lipocalin signature 45 59 2.2E-9 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 C3Y93_00310 8844a44d32ea586c6a81589e23dc571d 199 PRINTS PR01171 Bacterial lipocalin signature 154 165 2.2E-9 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 C3Y93_00310 8844a44d32ea586c6a81589e23dc571d 199 PRINTS PR01171 Bacterial lipocalin signature 181 191 2.2E-9 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 C3Y93_00310 8844a44d32ea586c6a81589e23dc571d 199 PRINTS PR01171 Bacterial lipocalin signature 139 147 2.2E-9 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 C3Y93_00310 8844a44d32ea586c6a81589e23dc571d 199 ProSitePatterns PS00213 Lipocalin signature. 46 57 - T 14-10-2018 IPR022272 Lipocalin family conserved site C3Y93_00310 8844a44d32ea586c6a81589e23dc571d 199 Gene3D G3DSA:2.40.128.20 24 194 7.6E-49 T 14-10-2018 IPR012674 Calycin C3Y93_00310 8844a44d32ea586c6a81589e23dc571d 199 Pfam PF08212 Lipocalin-like domain 45 191 2.0E-46 T 14-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain C3Y93_12240 39169264ac1bd730560b50f491947270 143 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3Y93_12240 39169264ac1bd730560b50f491947270 143 TIGRFAM TIGR01068 thioredoxin: thioredoxin 41 138 3.2E-31 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C3Y93_12240 39169264ac1bd730560b50f491947270 143 PRINTS PR00421 Thioredoxin family signature 64 73 1.6E-6 T 14-10-2018 C3Y93_12240 39169264ac1bd730560b50f491947270 143 PRINTS PR00421 Thioredoxin family signature 103 114 1.6E-6 T 14-10-2018 C3Y93_12240 39169264ac1bd730560b50f491947270 143 PRINTS PR00421 Thioredoxin family signature 56 64 1.6E-6 T 14-10-2018 C3Y93_12240 39169264ac1bd730560b50f491947270 143 PIRSF PIRSF000077 35 139 2.6E-30 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C3Y93_12240 39169264ac1bd730560b50f491947270 143 SUPERFAMILY SSF52833 32 140 4.18E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_12240 39169264ac1bd730560b50f491947270 143 Gene3D G3DSA:3.40.30.10 37 143 1.2E-31 T 14-10-2018 C3Y93_12240 39169264ac1bd730560b50f491947270 143 Pfam PF00085 Thioredoxin 38 137 2.0E-29 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C3Y93_12240 39169264ac1bd730560b50f491947270 143 Gene3D G3DSA:2.20.28.140 1 34 4.1E-13 T 14-10-2018 C3Y93_01770 0ac9b14beb4cae8cb678bf6a9246effd 226 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 54 67 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_01770 0ac9b14beb4cae8cb678bf6a9246effd 226 Gene3D G3DSA:3.20.20.70 2 226 1.7E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_01770 0ac9b14beb4cae8cb678bf6a9246effd 226 SUPERFAMILY SSF51366 3 224 7.54E-73 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3Y93_01770 0ac9b14beb4cae8cb678bf6a9246effd 226 SMART SM00934 2 222 2.0E-96 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_01770 0ac9b14beb4cae8cb678bf6a9246effd 226 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 4 222 1.6E-61 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_01770 0ac9b14beb4cae8cb678bf6a9246effd 226 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 3 221 3.5E-49 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_01770 0ac9b14beb4cae8cb678bf6a9246effd 226 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 1 226 35.207 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_13315 271dae6f19b7f2d5c34de8c53d8b0f51 337 SUPERFAMILY SSF52374 9 333 3.38E-77 T 14-10-2018 C3Y93_13315 271dae6f19b7f2d5c34de8c53d8b0f51 337 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 25 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_13315 271dae6f19b7f2d5c34de8c53d8b0f51 337 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 7 333 8.9E-69 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 C3Y93_13315 271dae6f19b7f2d5c34de8c53d8b0f51 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 71 90 1.3E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 C3Y93_13315 271dae6f19b7f2d5c34de8c53d8b0f51 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 20 36 1.3E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 C3Y93_13315 271dae6f19b7f2d5c34de8c53d8b0f51 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 201 211 1.3E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 C3Y93_13315 271dae6f19b7f2d5c34de8c53d8b0f51 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 149 170 1.3E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 C3Y93_13315 271dae6f19b7f2d5c34de8c53d8b0f51 337 Pfam PF00579 tRNA synthetases class I (W and Y) 6 288 1.3E-54 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_13315 271dae6f19b7f2d5c34de8c53d8b0f51 337 Gene3D G3DSA:3.40.50.620 10 329 2.8E-101 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_13315 271dae6f19b7f2d5c34de8c53d8b0f51 337 Gene3D G3DSA:1.10.240.10 188 302 2.8E-101 T 14-10-2018 C3Y93_05520 a1ab8069160b7183d4e27bf3a8bb62c0 442 Pfam PF00571 CBS domain 286 331 1.7E-6 T 14-10-2018 IPR000644 CBS domain C3Y93_05520 a1ab8069160b7183d4e27bf3a8bb62c0 442 Pfam PF03471 Transporter associated domain 350 427 8.5E-22 T 14-10-2018 IPR005170 Transporter-associated domain C3Y93_05520 a1ab8069160b7183d4e27bf3a8bb62c0 442 Gene3D G3DSA:3.10.580.10 195 349 9.1E-34 T 14-10-2018 C3Y93_05520 a1ab8069160b7183d4e27bf3a8bb62c0 442 SUPERFAMILY SSF56176 347 432 9.54E-23 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3Y93_05520 a1ab8069160b7183d4e27bf3a8bb62c0 442 SMART SM01091 349 429 1.2E-28 T 14-10-2018 IPR005170 Transporter-associated domain C3Y93_05520 a1ab8069160b7183d4e27bf3a8bb62c0 442 Gene3D G3DSA:3.30.465.10 350 430 4.2E-30 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C3Y93_05520 a1ab8069160b7183d4e27bf3a8bb62c0 442 Pfam PF01595 Domain of unknown function DUF21 9 199 7.7E-38 T 14-10-2018 IPR002550 CNNM, transmembrane domain C3Y93_05520 a1ab8069160b7183d4e27bf3a8bb62c0 442 SUPERFAMILY SSF54631 201 336 3.29E-23 T 14-10-2018 C3Y93_07220 0a063c20442261a769aa691cc17c887d 324 Pfam PF07549 SecD/SecF GG Motif 43 70 3.5E-8 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site C3Y93_07220 0a063c20442261a769aa691cc17c887d 324 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 21 304 25.822 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 C3Y93_07220 0a063c20442261a769aa691cc17c887d 324 Gene3D G3DSA:1.20.1640.10 108 305 1.7E-10 T 14-10-2018 C3Y93_07220 0a063c20442261a769aa691cc17c887d 324 Pfam PF02355 Protein export membrane protein 127 300 1.0E-59 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial C3Y93_07220 0a063c20442261a769aa691cc17c887d 324 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 49 293 5.2E-74 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 C3Y93_07220 0a063c20442261a769aa691cc17c887d 324 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 106 291 1.2E-45 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C3Y93_07220 0a063c20442261a769aa691cc17c887d 324 PRINTS PR01755 Bacterial translocase SecF protein signature 48 63 1.5E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C3Y93_07220 0a063c20442261a769aa691cc17c887d 324 PRINTS PR01755 Bacterial translocase SecF protein signature 210 228 1.5E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C3Y93_07220 0a063c20442261a769aa691cc17c887d 324 PRINTS PR01755 Bacterial translocase SecF protein signature 242 257 1.5E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C3Y93_07220 0a063c20442261a769aa691cc17c887d 324 PRINTS PR01755 Bacterial translocase SecF protein signature 162 176 1.5E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C3Y93_07220 0a063c20442261a769aa691cc17c887d 324 SUPERFAMILY SSF82866 83 301 1.57E-38 T 14-10-2018 C3Y93_08305 cdd23bf6e5f0d7b226522a999cf7a89e 372 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_08305 cdd23bf6e5f0d7b226522a999cf7a89e 372 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 370 23.243 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_08305 cdd23bf6e5f0d7b226522a999cf7a89e 372 Pfam PF00953 Glycosyl transferase family 4 99 296 3.0E-33 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 C3Y93_08305 cdd23bf6e5f0d7b226522a999cf7a89e 372 ProSitePatterns PS01348 MraY family signature 2. 201 212 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_08305 cdd23bf6e5f0d7b226522a999cf7a89e 372 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 372 6.6E-124 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_11690 cb112c4ab35cf47b03dd1bc14ea9544c 420 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 5 418 1.2E-208 T 14-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative C3Y93_11690 cb112c4ab35cf47b03dd1bc14ea9544c 420 SUPERFAMILY SSF102114 41 281 3.14E-16 T 14-10-2018 C3Y93_11690 cb112c4ab35cf47b03dd1bc14ea9544c 420 SUPERFAMILY SSF47781 303 381 2.11E-11 T 14-10-2018 IPR010994 RuvA domain 2-like C3Y93_11690 cb112c4ab35cf47b03dd1bc14ea9544c 420 Gene3D G3DSA:3.20.20.70 44 272 3.6E-11 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_11690 cb112c4ab35cf47b03dd1bc14ea9544c 420 Gene3D G3DSA:1.10.150.320 312 376 1.0E-6 T 14-10-2018 C3Y93_09515 133c2c37e9ba7e77f8d671198e75b4ff 70 SMART SM00357 7 70 2.0E-27 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 C3Y93_09515 133c2c37e9ba7e77f8d671198e75b4ff 70 Gene3D G3DSA:2.40.50.140 5 68 2.8E-28 T 14-10-2018 C3Y93_09515 133c2c37e9ba7e77f8d671198e75b4ff 70 SUPERFAMILY SSF50249 4 69 4.78E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_09515 133c2c37e9ba7e77f8d671198e75b4ff 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 2.0E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3Y93_09515 133c2c37e9ba7e77f8d671198e75b4ff 70 PIRSF PIRSF002599 1 70 9.7E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 C3Y93_09515 133c2c37e9ba7e77f8d671198e75b4ff 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 19 37 - T 14-10-2018 IPR019844 Cold-shock conserved site C3Y93_09515 133c2c37e9ba7e77f8d671198e75b4ff 70 PRINTS PR00050 Cold shock protein signature 43 61 6.5E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3Y93_09515 133c2c37e9ba7e77f8d671198e75b4ff 70 PRINTS PR00050 Cold shock protein signature 28 37 6.5E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3Y93_09515 133c2c37e9ba7e77f8d671198e75b4ff 70 PRINTS PR00050 Cold shock protein signature 8 23 6.5E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3Y93_12295 67edc7ebf4e27ce0f3113c0110817b91 232 Pfam PF04002 RadC-like JAB domain 107 225 1.7E-33 T 14-10-2018 IPR025657 RadC-like JAB domain C3Y93_12295 67edc7ebf4e27ce0f3113c0110817b91 232 SUPERFAMILY SSF102712 154 197 9.02E-5 T 14-10-2018 C3Y93_12295 67edc7ebf4e27ce0f3113c0110817b91 232 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 227 1.2E-60 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 C3Y93_12295 67edc7ebf4e27ce0f3113c0110817b91 232 SUPERFAMILY SSF47781 17 92 3.71E-9 T 14-10-2018 IPR010994 RuvA domain 2-like C3Y93_12295 67edc7ebf4e27ce0f3113c0110817b91 232 Gene3D G3DSA:3.40.140.10 103 227 2.7E-34 T 14-10-2018 C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 Gene3D G3DSA:3.30.450.20 285 391 2.9E-14 T 14-10-2018 C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 SMART SM00267 513 685 1.6E-31 T 14-10-2018 IPR000160 GGDEF domain C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 SUPERFAMILY SSF55785 317 390 9.9E-11 T 14-10-2018 IPR035965 PAS domain superfamily C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 SMART SM00091 397 465 0.0061 T 14-10-2018 IPR000014 PAS domain C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 SUPERFAMILY SSF55073 529 685 2.51E-31 T 14-10-2018 IPR029787 Nucleotide cyclase C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 Pfam PF00990 Diguanylate cyclase, GGDEF domain 525 680 4.7E-30 T 14-10-2018 IPR000160 GGDEF domain C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 Gene3D G3DSA:3.30.450.20 392 515 1.4E-20 T 14-10-2018 C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 Pfam PF08447 PAS fold 314 382 2.0E-12 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 Gene3D G3DSA:3.30.70.270 518 698 3.9E-38 T 14-10-2018 C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 526 684 1.0E-19 T 14-10-2018 IPR000160 GGDEF domain C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 SUPERFAMILY SSF55785 389 511 4.01E-16 T 14-10-2018 IPR035965 PAS domain superfamily C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 Pfam PF00563 EAL domain 701 935 6.9E-76 T 14-10-2018 IPR001633 EAL domain C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 SMART SM00086 345 389 0.0013 T 14-10-2018 IPR001610 PAC motif C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 SMART SM00086 471 513 5.6E-4 T 14-10-2018 IPR001610 PAC motif C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 316 396 1.2E-6 T 14-10-2018 IPR000014 PAS domain C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 394 520 5.8E-16 T 14-10-2018 IPR000014 PAS domain C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 Pfam PF00989 PAS fold 401 509 2.0E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 SMART SM00052 695 940 1.3E-109 T 14-10-2018 IPR001633 EAL domain C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 Gene3D G3DSA:3.20.20.450 699 950 1.3E-97 T 14-10-2018 IPR035919 EAL domain superfamily C3Y93_05045 7f03ac5c66dc9800671426098cc4be43 958 SUPERFAMILY SSF141868 700 948 9.55E-87 T 14-10-2018 IPR035919 EAL domain superfamily C3Y93_08115 084a490c426678e2917d4b3e779d7f03 165 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 8.4E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_08115 084a490c426678e2917d4b3e779d7f03 165 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_08115 084a490c426678e2917d4b3e779d7f03 165 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 31 104 7.1E-10 T 14-10-2018 IPR031982 Type IV minor pilin ComP C3Y93_08115 084a490c426678e2917d4b3e779d7f03 165 SUPERFAMILY SSF54523 10 99 5.02E-18 T 14-10-2018 C3Y93_08115 084a490c426678e2917d4b3e779d7f03 165 Gene3D G3DSA:3.30.700.10 10 160 4.5E-21 T 14-10-2018 C3Y93_08115 084a490c426678e2917d4b3e779d7f03 165 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 3.1E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_08115 084a490c426678e2917d4b3e779d7f03 165 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 4.4E-10 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C3Y93_08115 084a490c426678e2917d4b3e779d7f03 165 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 4.4E-10 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C3Y93_04145 8521aaf34154714e9e556d42d52495ac 255 Pfam PF00005 ABC transporter 33 180 2.4E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_04145 8521aaf34154714e9e556d42d52495ac 255 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_04145 8521aaf34154714e9e556d42d52495ac 255 SUPERFAMILY SSF52540 17 251 5.45E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_04145 8521aaf34154714e9e556d42d52495ac 255 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 18 253 1.7E-119 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 C3Y93_04145 8521aaf34154714e9e556d42d52495ac 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 250 8.8E-10 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal C3Y93_04145 8521aaf34154714e9e556d42d52495ac 255 Gene3D G3DSA:3.40.50.300 16 255 1.6E-69 T 14-10-2018 C3Y93_04145 8521aaf34154714e9e556d42d52495ac 255 SMART SM00382 42 227 6.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_06735 4fa4be41692161b3d246c6ae69d59fd4 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 14-10-2018 IPR020845 AMP-binding, conserved site C3Y93_06735 4fa4be41692161b3d246c6ae69d59fd4 548 SUPERFAMILY SSF56801 13 542 9.94E-149 T 14-10-2018 C3Y93_06735 4fa4be41692161b3d246c6ae69d59fd4 548 Gene3D G3DSA:3.40.50.12780 8 441 1.7E-110 T 14-10-2018 C3Y93_06735 4fa4be41692161b3d246c6ae69d59fd4 548 Pfam PF00501 AMP-binding enzyme 25 446 4.2E-101 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3Y93_06735 4fa4be41692161b3d246c6ae69d59fd4 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 529 2.3E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C3Y93_06735 4fa4be41692161b3d246c6ae69d59fd4 548 Gene3D G3DSA:3.30.300.310 442 545 3.3E-34 T 14-10-2018 C3Y93_10575 eade9aeee8b576f20a1b1dd0b44f456d 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 1.8E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10575 eade9aeee8b576f20a1b1dd0b44f456d 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.8E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10575 eade9aeee8b576f20a1b1dd0b44f456d 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 1.8E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10575 eade9aeee8b576f20a1b1dd0b44f456d 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 1.8E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10575 eade9aeee8b576f20a1b1dd0b44f456d 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 1.8E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10575 eade9aeee8b576f20a1b1dd0b44f456d 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 176 6.6E-43 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10575 eade9aeee8b576f20a1b1dd0b44f456d 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 8.8E-52 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10575 eade9aeee8b576f20a1b1dd0b44f456d 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 18.73 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10575 eade9aeee8b576f20a1b1dd0b44f456d 178 SUPERFAMILY SSF47928 3 106 1.28E-24 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10575 eade9aeee8b576f20a1b1dd0b44f456d 178 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10575 eade9aeee8b576f20a1b1dd0b44f456d 178 Gene3D G3DSA:1.10.520.20 2 107 6.3E-30 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_07670 136662ec1d3eca27056e5e2effe32802 208 SMART SM00363 98 162 4.3E-17 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07670 136662ec1d3eca27056e5e2effe32802 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07670 136662ec1d3eca27056e5e2effe32802 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 1.9E-80 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 C3Y93_07670 136662ec1d3eca27056e5e2effe32802 208 Pfam PF01479 S4 domain 99 145 5.7E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07670 136662ec1d3eca27056e5e2effe32802 208 Gene3D G3DSA:3.10.290.10 97 193 2.9E-78 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3Y93_07670 136662ec1d3eca27056e5e2effe32802 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 35.003 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 C3Y93_07670 136662ec1d3eca27056e5e2effe32802 208 SMART SM01390 3 97 4.5E-45 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 C3Y93_07670 136662ec1d3eca27056e5e2effe32802 208 Gene3D G3DSA:1.10.1050.10 6 208 2.9E-78 T 14-10-2018 C3Y93_07670 136662ec1d3eca27056e5e2effe32802 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 4.8E-31 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 C3Y93_07670 136662ec1d3eca27056e5e2effe32802 208 SUPERFAMILY SSF55174 2 208 7.07E-67 T 14-10-2018 C3Y93_07495 cf66341d4744686ec7826f380d790e6a 195 SMART SM00671 53 88 8.9E-8 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_07495 cf66341d4744686ec7826f380d790e6a 195 SMART SM00671 89 124 8.8E-8 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_07495 cf66341d4744686ec7826f380d790e6a 195 SUPERFAMILY SSF81901 44 153 6.67E-25 T 14-10-2018 C3Y93_07495 cf66341d4744686ec7826f380d790e6a 195 Gene3D G3DSA:1.25.40.10 27 195 2.7E-34 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_07495 cf66341d4744686ec7826f380d790e6a 195 Pfam PF08238 Sel1 repeat 54 87 1.2E-5 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_07495 cf66341d4744686ec7826f380d790e6a 195 Pfam PF08238 Sel1 repeat 89 124 5.0E-8 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_07495 cf66341d4744686ec7826f380d790e6a 195 Pfam PF08238 Sel1 repeat 138 152 85.0 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_02790 b9b5608e6ac08f531ae8e7a3ec2a0260 432 Gene3D G3DSA:1.10.150.20 180 241 4.9E-10 T 14-10-2018 C3Y93_02790 b9b5608e6ac08f531ae8e7a3ec2a0260 432 Gene3D G3DSA:2.30.40.20 16 79 6.1E-40 T 14-10-2018 C3Y93_02790 b9b5608e6ac08f531ae8e7a3ec2a0260 432 Pfam PF11799 impB/mucB/samB family C-terminal domain 250 363 2.1E-13 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3Y93_02790 b9b5608e6ac08f531ae8e7a3ec2a0260 432 SUPERFAMILY SSF100879 254 354 4.12E-7 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3Y93_02790 b9b5608e6ac08f531ae8e7a3ec2a0260 432 Pfam PF00817 impB/mucB/samB family 11 158 5.0E-34 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3Y93_02790 b9b5608e6ac08f531ae8e7a3ec2a0260 432 Gene3D G3DSA:3.30.70.270 10 166 6.1E-40 T 14-10-2018 C3Y93_02790 b9b5608e6ac08f531ae8e7a3ec2a0260 432 Gene3D G3DSA:3.30.1490.100 253 365 4.6E-6 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3Y93_02790 b9b5608e6ac08f531ae8e7a3ec2a0260 432 SUPERFAMILY SSF56672 6 246 1.51E-64 T 14-10-2018 C3Y93_06195 74091fddb6d5d42dd5e94f4ad96da281 145 Gene3D G3DSA:1.10.10.10 2 84 2.4E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_06195 74091fddb6d5d42dd5e94f4ad96da281 145 Pfam PF01475 Ferric uptake regulator family 10 130 2.6E-44 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 C3Y93_06195 74091fddb6d5d42dd5e94f4ad96da281 145 SUPERFAMILY SSF46785 6 134 9.4E-44 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_06195 74091fddb6d5d42dd5e94f4ad96da281 145 Gene3D G3DSA:3.30.1490.190 85 141 5.1E-23 T 14-10-2018 C3Y93_07695 b8b8b98867b85024c0341f9991a4975d 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 111 141 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07695 b8b8b98867b85024c0341f9991a4975d 146 SUPERFAMILY SSF52080 6 145 2.75E-41 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily C3Y93_07695 b8b8b98867b85024c0341f9991a4975d 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 145 2.2E-45 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07695 b8b8b98867b85024c0341f9991a4975d 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 145 5.8E-26 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P C3Y93_07695 b8b8b98867b85024c0341f9991a4975d 146 Gene3D G3DSA:3.100.10.10 73 146 8.3E-13 T 14-10-2018 C3Y93_07695 b8b8b98867b85024c0341f9991a4975d 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 146 17.939 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 C3Y93_01720 8c0e1b62683ed2f7ac8ace13e7543c16 315 PIRSF PIRSF002786 1 314 2.3E-93 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 C3Y93_01720 8c0e1b62683ed2f7ac8ace13e7543c16 315 Gene3D G3DSA:3.30.1300.30 42 300 4.4E-72 T 14-10-2018 C3Y93_01720 8c0e1b62683ed2f7ac8ace13e7543c16 315 SUPERFAMILY SSF158544 101 205 2.59E-30 T 14-10-2018 IPR038072 GspK, central domain superfamily C3Y93_01720 8c0e1b62683ed2f7ac8ace13e7543c16 315 Gene3D G3DSA:1.10.40.60 208 275 4.4E-72 T 14-10-2018 IPR038072 GspK, central domain superfamily C3Y93_01720 8c0e1b62683ed2f7ac8ace13e7543c16 315 Pfam PF03934 Type II secretion system (T2SS), protein K 30 306 1.5E-77 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 C3Y93_01720 8c0e1b62683ed2f7ac8ace13e7543c16 315 Gene3D G3DSA:1.10.40.60 99 207 4.4E-72 T 14-10-2018 IPR038072 GspK, central domain superfamily C3Y93_01720 8c0e1b62683ed2f7ac8ace13e7543c16 315 SUPERFAMILY SSF54523 37 304 2.82E-18 T 14-10-2018 C3Y93_01410 33c45eed17805b7a109fa9cd095dddac 686 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 24 509 4.4E-177 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 C3Y93_01410 33c45eed17805b7a109fa9cd095dddac 686 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 62 509 1.7E-171 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 C3Y93_01410 33c45eed17805b7a109fa9cd095dddac 686 ProSitePatterns PS01303 BCCT family of transporters signature. 325 334 - T 14-10-2018 IPR018093 BCCT transporter, conserved site C3Y93_11490 535e63e16b1c148c942c63a0e1a9a5d6 594 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 8 586 40.551 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 C3Y93_11490 535e63e16b1c148c942c63a0e1a9a5d6 594 SUPERFAMILY SSF52540 130 569 3.71E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11490 535e63e16b1c148c942c63a0e1a9a5d6 594 Pfam PF13604 AAA domain 131 337 3.5E-33 T 14-10-2018 C3Y93_11490 535e63e16b1c148c942c63a0e1a9a5d6 594 Pfam PF13538 UvrD-like helicase C-terminal domain 517 562 4.3E-13 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain C3Y93_11490 535e63e16b1c148c942c63a0e1a9a5d6 594 Gene3D G3DSA:3.40.50.300 318 460 9.6E-10 T 14-10-2018 C3Y93_11490 535e63e16b1c148c942c63a0e1a9a5d6 594 Gene3D G3DSA:3.40.50.300 464 578 2.6E-20 T 14-10-2018 C3Y93_11490 535e63e16b1c148c942c63a0e1a9a5d6 594 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 68 588 1.1E-126 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 C3Y93_11490 535e63e16b1c148c942c63a0e1a9a5d6 594 Gene3D G3DSA:3.40.50.300 96 317 3.5E-53 T 14-10-2018 C3Y93_05670 96ec13051387715ac9da8bb67afe53f4 126 Pfam PF04304 Protein of unknown function (DUF454) 4 117 4.2E-34 T 14-10-2018 IPR007401 Protein of unknown function DUF454 C3Y93_05670 96ec13051387715ac9da8bb67afe53f4 126 PIRSF PIRSF016789 2 123 1.2E-28 T 14-10-2018 IPR007401 Protein of unknown function DUF454 C3Y93_00470 0269bf0d392c39e66199e33255e66687 113 Gene3D G3DSA:3.40.30.10 6 108 8.0E-30 T 14-10-2018 C3Y93_00470 0269bf0d392c39e66199e33255e66687 113 Pfam PF00462 Glutaredoxin 21 85 2.3E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 C3Y93_00470 0269bf0d392c39e66199e33255e66687 113 PIRSF PIRSF005894 2 110 5.1E-46 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 C3Y93_00470 0269bf0d392c39e66199e33255e66687 113 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 10 105 1.6E-43 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related C3Y93_00470 0269bf0d392c39e66199e33255e66687 113 SUPERFAMILY SSF52833 7 107 1.96E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_11300 f98ae955a141757d039f1a16f0bea69d 200 Gene3D G3DSA:3.40.50.10610 43 192 2.5E-28 T 14-10-2018 C3Y93_11300 f98ae955a141757d039f1a16f0bea69d 200 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 6 191 1.9E-62 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB C3Y93_11300 f98ae955a141757d039f1a16f0bea69d 200 Pfam PF13036 Peptidoglycan-synthase activator LpoB 45 189 2.5E-52 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB C3Y93_10765 2e9ce1693124d358956e523e0fcbbf67 739 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 690 8.5E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3Y93_10765 2e9ce1693124d358956e523e0fcbbf67 739 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 623 0.1 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C3Y93_10765 2e9ce1693124d358956e523e0fcbbf67 739 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 4.8E-135 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3Y93_10765 2e9ce1693124d358956e523e0fcbbf67 739 Gene3D G3DSA:3.30.1360.40 239 332 1.0E-176 T 14-10-2018 C3Y93_10765 2e9ce1693124d358956e523e0fcbbf67 739 SMART SM00434 12 462 1.9E-220 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C3Y93_10765 2e9ce1693124d358956e523e0fcbbf67 739 Gene3D G3DSA:1.10.268.10 370 455 1.0E-176 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C3Y93_10765 2e9ce1693124d358956e523e0fcbbf67 739 SUPERFAMILY SSF56719 32 484 1.57E-154 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C3Y93_10765 2e9ce1693124d358956e523e0fcbbf67 739 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 735 0.0 T 14-10-2018 C3Y93_10765 2e9ce1693124d358956e523e0fcbbf67 739 SUPERFAMILY SSF101904 498 735 6.15E-48 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal C3Y93_10765 2e9ce1693124d358956e523e0fcbbf67 739 Gene3D G3DSA:3.90.199.10 33 484 1.0E-176 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 C3Y93_10765 2e9ce1693124d358956e523e0fcbbf67 739 Gene3D G3DSA:2.120.10.90 501 737 2.4E-17 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal C3Y93_10765 2e9ce1693124d358956e523e0fcbbf67 739 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 736 32.868 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C3Y93_13455 5770805931f805e476f6218711a4ecc9 312 Gene3D G3DSA:2.60.200.40 137 298 6.3E-18 T 14-10-2018 C3Y93_13455 5770805931f805e476f6218711a4ecc9 312 SMART SM00046 7 139 6.2E-4 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 C3Y93_13455 5770805931f805e476f6218711a4ecc9 312 SUPERFAMILY SSF111331 7 307 2.94E-53 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily C3Y93_13455 5770805931f805e476f6218711a4ecc9 312 Gene3D G3DSA:3.40.50.10330 1 136 1.5E-23 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 C3Y93_13455 5770805931f805e476f6218711a4ecc9 312 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 136 1.8E-23 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 C3Y93_03355 309fb10bdd5494103a48999c8519d05e 173 SUPERFAMILY SSF52799 8 133 3.34E-15 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like C3Y93_03355 309fb10bdd5494103a48999c8519d05e 173 Gene3D G3DSA:3.90.190.10 2 155 5.6E-31 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like C3Y93_08760 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 58 81 1.9E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_08760 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 50 1.9E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_08760 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 SUPERFAMILY SSF48498 96 231 2.56E-32 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C3Y93_08760 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 Gene3D G3DSA:1.10.357.10 95 233 4.5E-30 T 14-10-2018 C3Y93_08760 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 97 227 9.8E-26 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 C3Y93_08760 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 PRINTS PR00400 Tetracycline repressor protein signature 210 224 8.2E-35 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 C3Y93_08760 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 PRINTS PR00400 Tetracycline repressor protein signature 123 146 8.2E-35 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 C3Y93_08760 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 PRINTS PR00400 Tetracycline repressor protein signature 103 122 8.2E-35 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 C3Y93_08760 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 PRINTS PR00400 Tetracycline repressor protein signature 158 177 8.2E-35 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 C3Y93_08760 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 PRINTS PR00400 Tetracycline repressor protein signature 49 72 8.2E-35 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 C3Y93_08760 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 38 83 1.8E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_08760 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 Gene3D G3DSA:1.10.10.60 30 93 3.1E-25 T 14-10-2018 C3Y93_08760 95cd1b4b92b41f5a7e4f1a4f09a35b82 234 SUPERFAMILY SSF46689 31 91 9.98E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_09275 1ba2408e454f3882a111cce3bd42e53a 115 SUPERFAMILY SSF52833 1 113 3.64E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_09275 1ba2408e454f3882a111cce3bd42e53a 115 Pfam PF03960 ArsC family 5 113 7.1E-13 T 14-10-2018 IPR006660 Arsenate reductase-like C3Y93_09275 1ba2408e454f3882a111cce3bd42e53a 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 112 1.9E-23 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR C3Y93_09275 1ba2408e454f3882a111cce3bd42e53a 115 Gene3D G3DSA:3.40.30.10 1 114 1.4E-37 T 14-10-2018 C3Y93_10145 ee380966a8da65a7464935ebeac0a199 728 SUPERFAMILY SSF52540 532 713 2.23E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_10145 ee380966a8da65a7464935ebeac0a199 728 Pfam PF13614 AAA domain 545 691 1.7E-10 T 14-10-2018 IPR025669 AAA domain C3Y93_10145 ee380966a8da65a7464935ebeac0a199 728 Gene3D G3DSA:3.40.50.300 451 726 9.5E-76 T 14-10-2018 C3Y93_10145 ee380966a8da65a7464935ebeac0a199 728 Pfam PF13807 G-rich domain on putative tyrosine kinase 378 458 1.8E-28 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain C3Y93_10145 ee380966a8da65a7464935ebeac0a199 728 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 514 717 1.7E-46 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 C3Y93_10145 ee380966a8da65a7464935ebeac0a199 728 Pfam PF02706 Chain length determinant protein 9 101 1.3E-20 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 C3Y93_03320 4a6c26833c8d4df2decc6014b924ee88 111 SUPERFAMILY SSF50118 1 107 6.54E-26 T 14-10-2018 C3Y93_03320 4a6c26833c8d4df2decc6014b924ee88 111 Gene3D G3DSA:2.30.30.110 1 108 3.0E-34 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor C3Y93_03320 4a6c26833c8d4df2decc6014b924ee88 111 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 105 5.8E-20 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 C3Y93_11035 202065d2657aa7b2101a98c910b7d99e 143 SUPERFAMILY SSF54637 4 132 7.63E-33 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_11035 202065d2657aa7b2101a98c910b7d99e 143 Gene3D G3DSA:3.10.129.10 2 139 1.1E-40 T 14-10-2018 C3Y93_11035 202065d2657aa7b2101a98c910b7d99e 143 Pfam PF13279 Thioesterase-like superfamily 15 128 7.3E-17 T 14-10-2018 C3Y93_07685 ca856236dc39419630b3c2e5826989ea 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 8.4E-21 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07685 ca856236dc39419630b3c2e5826989ea 38 Pfam PF00444 Ribosomal protein L36 1 38 2.5E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07685 ca856236dc39419630b3c2e5826989ea 38 SUPERFAMILY SSF57840 1 38 1.11E-16 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07685 ca856236dc39419630b3c2e5826989ea 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 4.0E-10 T 14-10-2018 C3Y93_07685 ca856236dc39419630b3c2e5826989ea 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.47 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07685 ca856236dc39419630b3c2e5826989ea 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 Gene3D G3DSA:3.40.50.720 204 369 3.0E-67 T 14-10-2018 C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 SUPERFAMILY SSF51735 197 373 2.67E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 197 372 7.0E-57 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 452 1.5E-156 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 SMART SM00996 10 459 1.5E-274 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 Gene3D G3DSA:3.40.50.1480 1 148 3.1E-70 T 14-10-2018 C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 219 235 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 147 4.6E-73 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 SMART SM00997 197 372 3.0E-83 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 452 44.948 T 14-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 PIRSF PIRSF001109 1 460 2.5E-178 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 Gene3D G3DSA:3.40.50.1480 370 460 1.0E-30 T 14-10-2018 C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 Gene3D G3DSA:3.40.50.1480 149 203 1.2E-19 T 14-10-2018 C3Y93_05030 906bda4567892e8bef026c132890f3d7 460 SUPERFAMILY SSF52283 8 460 4.19E-109 T 14-10-2018 C3Y93_13745 f2cdebe77fcde5cda9a56f608c9b94ad 306 Gene3D G3DSA:2.60.130.10 1 306 1.6E-119 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 C3Y93_13745 f2cdebe77fcde5cda9a56f608c9b94ad 306 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 133 161 - T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 C3Y93_13745 f2cdebe77fcde5cda9a56f608c9b94ad 306 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 3 287 8.9E-145 T 14-10-2018 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1 C3Y93_13745 f2cdebe77fcde5cda9a56f608c9b94ad 306 SUPERFAMILY SSF49482 15 293 3.4E-83 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 C3Y93_13745 f2cdebe77fcde5cda9a56f608c9b94ad 306 Pfam PF04444 Catechol dioxygenase N terminus 23 92 2.1E-21 T 14-10-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 C3Y93_13745 f2cdebe77fcde5cda9a56f608c9b94ad 306 Pfam PF00775 Dioxygenase 101 287 3.0E-58 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 C3Y93_06860 79528c3f1bd8cf14f4e04c7f09ebf159 238 SUPERFAMILY SSF49354 18 143 7.33E-9 T 14-10-2018 IPR008962 PapD-like superfamily C3Y93_06860 79528c3f1bd8cf14f4e04c7f09ebf159 238 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 143 1.4E-7 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 C3Y93_02890 b94f6e064caecda94347403aab34f543 147 Pfam PF07030 Protein of unknown function (DUF1320) 2 107 3.1E-31 T 14-10-2018 IPR009752 Bacteriophage Mu, Gp36 C3Y93_04935 74511bc473d568d30183b1fd5381ac48 333 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 39 330 1.6E-91 T 14-10-2018 IPR011757 Lytic transglycosylase MltB C3Y93_04935 74511bc473d568d30183b1fd5381ac48 333 Gene3D G3DSA:1.10.530.10 76 327 2.9E-91 T 14-10-2018 C3Y93_04935 74511bc473d568d30183b1fd5381ac48 333 SUPERFAMILY SSF53955 22 331 3.94E-81 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3Y93_04935 74511bc473d568d30183b1fd5381ac48 333 Gene3D G3DSA:1.10.8.350 43 209 2.9E-91 T 14-10-2018 C3Y93_04935 74511bc473d568d30183b1fd5381ac48 333 Pfam PF13406 Transglycosylase SLT domain 34 327 2.0E-85 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 C3Y93_00920 41fae516e51a85b4418081f4e4622682 283 Gene3D G3DSA:1.10.510.10 125 282 6.6E-28 T 14-10-2018 C3Y93_00920 41fae516e51a85b4418081f4e4622682 283 Pfam PF00069 Protein kinase domain 132 272 2.0E-22 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 C3Y93_00920 41fae516e51a85b4418081f4e4622682 283 SUPERFAMILY SSF56112 34 279 2.6E-29 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3Y93_00920 41fae516e51a85b4418081f4e4622682 283 SMART SM00220 27 281 2.5E-7 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 C3Y93_08365 3bc344305f659af9e9b9c69bfedcaf0d 553 Pfam PF00005 ABC transporter 22 191 8.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_08365 3bc344305f659af9e9b9c69bfedcaf0d 553 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 551 2.4E-288 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 C3Y93_08365 3bc344305f659af9e9b9c69bfedcaf0d 553 SUPERFAMILY SSF52540 302 531 1.22E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_08365 3bc344305f659af9e9b9c69bfedcaf0d 553 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_08365 3bc344305f659af9e9b9c69bfedcaf0d 553 Pfam PF00005 ABC transporter 340 473 4.4E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_08365 3bc344305f659af9e9b9c69bfedcaf0d 553 Gene3D G3DSA:3.40.50.300 287 551 5.3E-74 T 14-10-2018 C3Y93_08365 3bc344305f659af9e9b9c69bfedcaf0d 553 SUPERFAMILY SSF52540 9 244 6.69E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_08365 3bc344305f659af9e9b9c69bfedcaf0d 553 Pfam PF12848 ABC transporter 230 304 1.3E-11 T 14-10-2018 IPR032781 ABC-transporter extension domain C3Y93_08365 3bc344305f659af9e9b9c69bfedcaf0d 553 SMART SM00382 31 236 3.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_08365 3bc344305f659af9e9b9c69bfedcaf0d 553 SMART SM00382 348 522 1.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_08365 3bc344305f659af9e9b9c69bfedcaf0d 553 Gene3D G3DSA:3.40.50.300 1 286 6.9E-86 T 14-10-2018 C3Y93_08365 3bc344305f659af9e9b9c69bfedcaf0d 553 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_00515 fd77f2c744ed38e7dd535dc66f0fa3bd 189 Gene3D G3DSA:2.40.50.140 132 189 2.4E-27 T 14-10-2018 C3Y93_00515 fd77f2c744ed38e7dd535dc66f0fa3bd 189 SMART SM00841 133 188 2.3E-31 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 C3Y93_00515 fd77f2c744ed38e7dd535dc66f0fa3bd 189 SUPERFAMILY SSF50104 2 63 1.55E-21 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C3Y93_00515 fd77f2c744ed38e7dd535dc66f0fa3bd 189 Gene3D G3DSA:2.30.30.30 1 65 2.3E-28 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 C3Y93_00515 fd77f2c744ed38e7dd535dc66f0fa3bd 189 SUPERFAMILY SSF50249 132 189 3.26E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_00515 fd77f2c744ed38e7dd535dc66f0fa3bd 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 125 6.6E-21 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 C3Y93_00515 fd77f2c744ed38e7dd535dc66f0fa3bd 189 Hamap MF_00141 Elongation factor P [efp]. 3 189 48.779 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 C3Y93_00515 fd77f2c744ed38e7dd535dc66f0fa3bd 189 PIRSF PIRSF005901 2 189 6.6E-63 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP C3Y93_00515 fd77f2c744ed38e7dd535dc66f0fa3bd 189 SMART SM01185 69 125 1.4E-24 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 C3Y93_00515 fd77f2c744ed38e7dd535dc66f0fa3bd 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 2.3E-26 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like C3Y93_00515 fd77f2c744ed38e7dd535dc66f0fa3bd 189 Gene3D G3DSA:2.40.50.140 66 131 3.7E-28 T 14-10-2018 C3Y93_00515 fd77f2c744ed38e7dd535dc66f0fa3bd 189 SUPERFAMILY SSF50249 69 130 6.85E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_00515 fd77f2c744ed38e7dd535dc66f0fa3bd 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 189 2.2E-76 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 C3Y93_00515 fd77f2c744ed38e7dd535dc66f0fa3bd 189 Pfam PF09285 Elongation factor P, C-terminal 133 188 9.7E-25 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 C3Y93_05065 50c38e8b7f1c0f68c53f0e67ccf30c2a 355 SUPERFAMILY SSF52283 18 113 6.38E-17 T 14-10-2018 C3Y93_05065 50c38e8b7f1c0f68c53f0e67ccf30c2a 355 Pfam PF11890 Domain of unknown function (DUF3410) 298 349 5.5E-13 T 14-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 C3Y93_05065 50c38e8b7f1c0f68c53f0e67ccf30c2a 355 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 21 272 8.2E-18 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 C3Y93_05065 50c38e8b7f1c0f68c53f0e67ccf30c2a 355 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 355 41.044 T 14-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 C3Y93_05065 50c38e8b7f1c0f68c53f0e67ccf30c2a 355 SUPERFAMILY SSF51735 91 254 5.22E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_05065 50c38e8b7f1c0f68c53f0e67ccf30c2a 355 Gene3D G3DSA:3.40.50.720 2 272 8.9E-107 T 14-10-2018 C3Y93_05065 50c38e8b7f1c0f68c53f0e67ccf30c2a 355 Gene3D G3DSA:3.30.1370.170 290 350 6.9E-12 T 14-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 C3Y93_05065 50c38e8b7f1c0f68c53f0e67ccf30c2a 355 Gene3D G3DSA:3.40.50.720 92 254 8.9E-107 T 14-10-2018 C3Y93_05065 50c38e8b7f1c0f68c53f0e67ccf30c2a 355 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 C3Y93_05065 50c38e8b7f1c0f68c53f0e67ccf30c2a 355 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 253 4.5E-35 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 Pfam PF02310 B12 binding domain 749 842 2.7E-18 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 Gene3D G3DSA:1.10.288.10 939 1094 6.0E-128 T 14-10-2018 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 SUPERFAMILY SSF51717 353 622 1.16E-88 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 Gene3D G3DSA:3.20.20.330 2 336 3.6E-126 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 Pfam PF00809 Pterin binding enzyme 357 595 3.4E-57 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 SMART SM01018 658 741 3.0E-43 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 Gene3D G3DSA:3.20.20.20 337 645 1.6E-130 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 Gene3D G3DSA:3.40.50.280 745 897 6.5E-54 T 14-10-2018 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 Gene3D G3DSA:3.10.196.10 911 1224 6.0E-128 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 Pfam PF02607 B12 binding domain 660 733 4.9E-24 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 PIRSF PIRSF000381 1 1197 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 SUPERFAMILY SSF82282 6 396 2.35E-117 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 Gene3D G3DSA:1.10.1240.10 650 738 6.0E-40 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 SUPERFAMILY SSF47644 653 740 4.05E-28 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 Pfam PF02574 Homocysteine S-methyltransferase 16 322 8.1E-77 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 941 1210 1.8E-112 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 SUPERFAMILY SSF52242 744 895 9.29E-44 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 SUPERFAMILY SSF56507 906 1225 2.22E-115 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_13540 671415253ee8c981faf9f646306333e6 1229 TIGRFAM TIGR02082 metH: methionine synthase 12 1193 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_08040 547347c2101cef58a4c8edcab402c7b1 409 Gene3D G3DSA:1.20.1720.10 17 391 2.0E-69 T 14-10-2018 C3Y93_08040 547347c2101cef58a4c8edcab402c7b1 409 SUPERFAMILY SSF103473 7 389 3.66E-56 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_08040 547347c2101cef58a4c8edcab402c7b1 409 Pfam PF07690 Major Facilitator Superfamily 23 356 7.8E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_08040 547347c2101cef58a4c8edcab402c7b1 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C3Y93_00580 174cd8c3391387d447028ccc9a86ce88 193 SUPERFAMILY SSF53098 3 187 1.09E-67 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_00580 174cd8c3391387d447028ccc9a86ce88 193 Gene3D G3DSA:3.30.420.10 1 193 3.1E-76 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_00580 174cd8c3391387d447028ccc9a86ce88 193 Pfam PF01351 Ribonuclease HII 4 181 7.2E-43 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain C3Y93_00580 174cd8c3391387d447028ccc9a86ce88 193 Hamap MF_00052_B Ribonuclease HII [rnhB]. 2 182 38.112 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 C3Y93_06880 9fe94a77175abdbd40ed1cfd53b8964c 268 SUPERFAMILY SSF51735 8 257 6.18E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_06880 9fe94a77175abdbd40ed1cfd53b8964c 268 Gene3D G3DSA:3.40.50.720 1 267 2.4E-64 T 14-10-2018 C3Y93_06880 9fe94a77175abdbd40ed1cfd53b8964c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06880 9fe94a77175abdbd40ed1cfd53b8964c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06880 9fe94a77175abdbd40ed1cfd53b8964c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06880 9fe94a77175abdbd40ed1cfd53b8964c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_06880 9fe94a77175abdbd40ed1cfd53b8964c 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 255 2.9E-86 T 14-10-2018 C3Y93_06880 9fe94a77175abdbd40ed1cfd53b8964c 268 PIRSF PIRSF000094 3 263 4.5E-112 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C3Y93_13490 328ac712180e67eca32ef6d0b1db24f0 444 SUPERFAMILY SSF158791 3 126 7.85E-16 T 14-10-2018 C3Y93_13490 328ac712180e67eca32ef6d0b1db24f0 444 Gene3D G3DSA:1.10.357.20 269 444 1.9E-52 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain C3Y93_13490 328ac712180e67eca32ef6d0b1db24f0 444 SMART SM00924 28 129 1.1E-10 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain C3Y93_13490 328ac712180e67eca32ef6d0b1db24f0 444 Pfam PF01769 Divalent cation transporter 317 436 2.4E-25 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 C3Y93_13490 328ac712180e67eca32ef6d0b1db24f0 444 Gene3D G3DSA:3.10.580.10 125 253 2.1E-39 T 14-10-2018 C3Y93_13490 328ac712180e67eca32ef6d0b1db24f0 444 SUPERFAMILY SSF54631 129 261 5.56E-26 T 14-10-2018 C3Y93_13490 328ac712180e67eca32ef6d0b1db24f0 444 SUPERFAMILY SSF161093 274 443 8.24E-47 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 C3Y93_13490 328ac712180e67eca32ef6d0b1db24f0 444 TIGRFAM TIGR00400 mgtE: magnesium transporter 13 443 5.7E-101 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 C3Y93_13490 328ac712180e67eca32ef6d0b1db24f0 444 Pfam PF00571 CBS domain 195 246 0.0016 T 14-10-2018 IPR000644 CBS domain C3Y93_13490 328ac712180e67eca32ef6d0b1db24f0 444 Pfam PF00571 CBS domain 129 186 7.5E-7 T 14-10-2018 IPR000644 CBS domain C3Y93_13490 328ac712180e67eca32ef6d0b1db24f0 444 Pfam PF03448 MgtE intracellular N domain 29 127 4.7E-13 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain C3Y93_13490 328ac712180e67eca32ef6d0b1db24f0 444 SMART SM00116 136 189 0.37 T 14-10-2018 IPR000644 CBS domain C3Y93_13490 328ac712180e67eca32ef6d0b1db24f0 444 SMART SM00116 200 248 7.0E-4 T 14-10-2018 IPR000644 CBS domain C3Y93_13490 328ac712180e67eca32ef6d0b1db24f0 444 Gene3D G3DSA:1.25.60.10 1 124 5.0E-14 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily C3Y93_01175 bf146552894c875efd03f51cb66b666d 227 Pfam PF00149 Calcineurin-like phosphoesterase 16 196 2.3E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C3Y93_01175 bf146552894c875efd03f51cb66b666d 227 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 73 78 - T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3Y93_01175 bf146552894c875efd03f51cb66b666d 227 Gene3D G3DSA:3.60.21.10 4 227 7.0E-50 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C3Y93_01175 bf146552894c875efd03f51cb66b666d 227 SUPERFAMILY SSF56300 11 226 5.54E-39 T 14-10-2018 C3Y93_10990 2a0ccbc5e0306f2a2f9c881d7202f965 240 SUPERFAMILY SSF109755 14 235 1.36E-66 T 14-10-2018 C3Y93_10990 2a0ccbc5e0306f2a2f9c881d7202f965 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 14 223 1.3E-64 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 C3Y93_10990 2a0ccbc5e0306f2a2f9c881d7202f965 240 Pfam PF01895 PhoU domain 30 114 1.8E-17 T 14-10-2018 IPR026022 PhoU domain C3Y93_10990 2a0ccbc5e0306f2a2f9c881d7202f965 240 Pfam PF01895 PhoU domain 132 215 7.9E-16 T 14-10-2018 IPR026022 PhoU domain C3Y93_10990 2a0ccbc5e0306f2a2f9c881d7202f965 240 Gene3D G3DSA:1.20.58.220 122 235 3.5E-33 T 14-10-2018 IPR038078 PhoU-like domain superfamily C3Y93_10990 2a0ccbc5e0306f2a2f9c881d7202f965 240 PIRSF PIRSF003107 9 230 1.7E-65 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 C3Y93_10990 2a0ccbc5e0306f2a2f9c881d7202f965 240 Gene3D G3DSA:1.20.58.220 3 121 1.3E-38 T 14-10-2018 IPR038078 PhoU-like domain superfamily C3Y93_07180 d767d6feb33829ea3d594ebbec9b0550 345 Pfam PF02547 Queuosine biosynthesis protein 3 340 7.5E-127 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 C3Y93_07180 d767d6feb33829ea3d594ebbec9b0550 345 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 44.673 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 C3Y93_07180 d767d6feb33829ea3d594ebbec9b0550 345 Gene3D G3DSA:2.40.10.240 63 159 1.8E-114 T 14-10-2018 C3Y93_07180 d767d6feb33829ea3d594ebbec9b0550 345 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 5.5E-133 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 C3Y93_07180 d767d6feb33829ea3d594ebbec9b0550 345 SUPERFAMILY SSF111337 1 340 8.11E-126 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 C3Y93_07180 d767d6feb33829ea3d594ebbec9b0550 345 Gene3D G3DSA:3.40.1780.10 14 340 1.8E-114 T 14-10-2018 C3Y93_09355 8e627d59467e4d6b75de74738425d103 177 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 1 165 22.859 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB C3Y93_09355 8e627d59467e4d6b75de74738425d103 177 SUPERFAMILY SSF158442 11 159 8.5E-41 T 14-10-2018 IPR023380 DsbB-like superfamily C3Y93_09355 8e627d59467e4d6b75de74738425d103 177 Pfam PF02600 Disulfide bond formation protein DsbB 6 157 5.6E-41 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 C3Y93_09355 8e627d59467e4d6b75de74738425d103 177 Gene3D G3DSA:1.20.1550.10 3 167 2.4E-48 T 14-10-2018 IPR023380 DsbB-like superfamily C3Y93_11470 d7cfb56b54f23e772f648ba5f29cff0d 472 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 254 471 1.4E-76 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related C3Y93_11470 d7cfb56b54f23e772f648ba5f29cff0d 472 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 13 223 3.3E-22 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related C3Y93_11470 d7cfb56b54f23e772f648ba5f29cff0d 472 Gene3D G3DSA:3.40.50.300 2 225 5.2E-41 T 14-10-2018 C3Y93_11470 d7cfb56b54f23e772f648ba5f29cff0d 472 Gene3D G3DSA:3.40.50.300 237 472 6.0E-89 T 14-10-2018 C3Y93_11470 d7cfb56b54f23e772f648ba5f29cff0d 472 SUPERFAMILY SSF52540 282 470 8.04E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_08370 ed78599c26a9101f87b40b4b93150724 425 Gene3D G3DSA:3.40.640.10 4 287 1.4E-102 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_08370 ed78599c26a9101f87b40b4b93150724 425 PIRSF PIRSF001434 1 425 2.6E-137 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3Y93_08370 ed78599c26a9101f87b40b4b93150724 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 423 3.3E-202 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 C3Y93_08370 ed78599c26a9101f87b40b4b93150724 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3Y93_08370 ed78599c26a9101f87b40b4b93150724 425 SUPERFAMILY SSF53383 4 423 3.72E-132 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_08370 ed78599c26a9101f87b40b4b93150724 425 Gene3D G3DSA:3.90.1150.10 291 425 5.7E-55 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_08370 ed78599c26a9101f87b40b4b93150724 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 422 5.8E-147 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3Y93_09290 3ff5794e3d15355629601e0c2a5b1e4f 187 Pfam PF02525 Flavodoxin-like fold 1 186 7.2E-44 T 14-10-2018 IPR003680 Flavodoxin-like fold C3Y93_09290 3ff5794e3d15355629601e0c2a5b1e4f 187 Gene3D G3DSA:3.40.50.360 1 187 8.8E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3Y93_09290 3ff5794e3d15355629601e0c2a5b1e4f 187 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 187 28.265 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 C3Y93_09290 3ff5794e3d15355629601e0c2a5b1e4f 187 SUPERFAMILY SSF52218 1 186 3.32E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3Y93_11960 66c5deea7027ccadccc253fa295b2d88 370 Pfam PF00534 Glycosyl transferases group 1 190 332 6.0E-24 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3Y93_11960 66c5deea7027ccadccc253fa295b2d88 370 Gene3D G3DSA:3.40.50.2000 1 171 1.1E-22 T 14-10-2018 C3Y93_11960 66c5deea7027ccadccc253fa295b2d88 370 Gene3D G3DSA:3.40.50.2000 172 342 3.5E-28 T 14-10-2018 C3Y93_11960 66c5deea7027ccadccc253fa295b2d88 370 Pfam PF13439 Glycosyltransferase Family 4 13 165 5.6E-25 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3Y93_11960 66c5deea7027ccadccc253fa295b2d88 370 SUPERFAMILY SSF53756 7 366 3.45E-61 T 14-10-2018 C3Y93_13200 98a47fe7b06cd9ea4161bc81b779e1a3 350 Pfam PF00849 RNA pseudouridylate synthase 124 272 2.2E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_13200 98a47fe7b06cd9ea4161bc81b779e1a3 350 Gene3D G3DSA:3.30.2350.10 116 347 3.8E-69 T 14-10-2018 C3Y93_13200 98a47fe7b06cd9ea4161bc81b779e1a3 350 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 166 180 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_13200 98a47fe7b06cd9ea4161bc81b779e1a3 350 SUPERFAMILY SSF55120 109 344 1.1E-75 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_13200 98a47fe7b06cd9ea4161bc81b779e1a3 350 Gene3D G3DSA:3.10.290.10 34 107 5.2E-15 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3Y93_13200 98a47fe7b06cd9ea4161bc81b779e1a3 350 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 48 344 5.8E-93 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_13200 98a47fe7b06cd9ea4161bc81b779e1a3 350 SUPERFAMILY SSF55174 48 136 9.59E-9 T 14-10-2018 C3Y93_13200 98a47fe7b06cd9ea4161bc81b779e1a3 350 Pfam PF01479 S4 domain 51 93 1.6E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_05700 ed69dbbc20b10f19261e665d8e21e2cd 691 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 448 477 1.2E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3Y93_05700 ed69dbbc20b10f19261e665d8e21e2cd 691 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 554 583 1.2E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3Y93_05700 ed69dbbc20b10f19261e665d8e21e2cd 691 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 525 552 1.2E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 C3Y93_05700 ed69dbbc20b10f19261e665d8e21e2cd 691 SUPERFAMILY SSF58104 387 689 6.63E-69 T 14-10-2018 C3Y93_05700 ed69dbbc20b10f19261e665d8e21e2cd 691 Gene3D G3DSA:1.10.287.950 364 690 2.2E-63 T 14-10-2018 C3Y93_05700 ed69dbbc20b10f19261e665d8e21e2cd 691 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 656 7.9E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3Y93_05700 ed69dbbc20b10f19261e665d8e21e2cd 691 SMART SM00283 427 688 6.9E-87 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C3Y93_06800 eec6cf1b6b3386882764cbe59b6ae319 233 PIRSF PIRSF006170 1 218 5.3E-64 T 14-10-2018 IPR026039 Uncharacterised protein family UPF0070 C3Y93_06800 eec6cf1b6b3386882764cbe59b6ae319 233 Gene3D G3DSA:1.25.40.10 37 209 5.9E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_06800 eec6cf1b6b3386882764cbe59b6ae319 233 SUPERFAMILY SSF48452 81 193 3.04E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_06800 eec6cf1b6b3386882764cbe59b6ae319 233 Pfam PF09976 Tetratricopeptide repeat-like domain 14 213 4.7E-42 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 C3Y93_13535 973ddc72b15d93cfe507f5077f3e6f75 377 Gene3D G3DSA:3.30.460.10 23 167 1.2E-25 T 14-10-2018 C3Y93_13535 973ddc72b15d93cfe507f5077f3e6f75 377 SMART SM00954 67 186 5.0E-19 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 C3Y93_13535 973ddc72b15d93cfe507f5077f3e6f75 377 Pfam PF04607 Region found in RelA / SpoT proteins 67 173 7.3E-20 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 C3Y93_13535 973ddc72b15d93cfe507f5077f3e6f75 377 SUPERFAMILY SSF81301 28 199 1.54E-26 T 14-10-2018 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 SUPERFAMILY SSF53748 2 392 1.02E-136 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 PIRSF PIRSF000724 1 395 2.5E-127 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 Gene3D G3DSA:3.40.50.1260 10 389 1.5E-156 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 3.7E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 3.7E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 3.7E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 PRINTS PR00477 Phosphoglycerate kinase family signature 313 338 3.7E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.7E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.7E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 3.7E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 3.7E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 3.7E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 Gene3D G3DSA:3.40.50.1260 165 383 1.5E-156 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 38.054 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_03515 8a38dc501484784f080218e5ca46eae4 395 Pfam PF00162 Phosphoglycerate kinase 6 383 2.7E-137 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C3Y93_10310 96d4af2b51e1e577dd085004c500a14e 87 Gene3D G3DSA:1.10.1220.170 41 86 2.3E-13 T 14-10-2018 C3Y93_10310 96d4af2b51e1e577dd085004c500a14e 87 SUPERFAMILY SSF143120 1 82 1.66E-24 T 14-10-2018 IPR036165 YefM-like superfamily C3Y93_10310 96d4af2b51e1e577dd085004c500a14e 87 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 3.6E-16 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM C3Y93_10310 96d4af2b51e1e577dd085004c500a14e 87 Gene3D G3DSA:3.40.1620.10 1 40 1.5E-10 T 14-10-2018 C3Y93_10310 96d4af2b51e1e577dd085004c500a14e 87 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 55 3.2E-10 T 14-10-2018 C3Y93_12300 202a5acca8def0db3a99bf1affaecb16 424 Gene3D G3DSA:3.40.50.1950 4 193 1.7E-59 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 C3Y93_12300 202a5acca8def0db3a99bf1affaecb16 424 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 10 410 1.2E-142 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 C3Y93_12300 202a5acca8def0db3a99bf1affaecb16 424 SUPERFAMILY SSF52507 6 186 1.27E-62 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 C3Y93_12300 202a5acca8def0db3a99bf1affaecb16 424 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 199 382 1.7E-69 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 C3Y93_12300 202a5acca8def0db3a99bf1affaecb16 424 SUPERFAMILY SSF102645 198 414 2.09E-71 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 C3Y93_12300 202a5acca8def0db3a99bf1affaecb16 424 Gene3D G3DSA:3.40.50.10300 197 418 1.6E-76 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 C3Y93_12300 202a5acca8def0db3a99bf1affaecb16 424 Pfam PF02441 Flavoprotein 11 183 5.6E-48 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 C3Y93_04005 4b41a48896d2ccc099df9e8c7aca17af 666 Pfam PF03235 Protein of unknown function DUF262 13 217 2.3E-28 T 14-10-2018 IPR004919 Domain of unknown function DUF262 C3Y93_04005 4b41a48896d2ccc099df9e8c7aca17af 666 Pfam PF07510 Protein of unknown function (DUF1524) 524 654 4.8E-15 T 14-10-2018 IPR011089 Domain of unknown function DUF1524 C3Y93_04005 4b41a48896d2ccc099df9e8c7aca17af 666 ProDom PD062361 VC1766 YFJM PM0595 585 663 1.0E-11 T 14-10-2018 C3Y93_13625 c39a3b6186f54cc288148f680b3b0744 312 Pfam PF00561 alpha/beta hydrolase fold 40 294 2.5E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_13625 c39a3b6186f54cc288148f680b3b0744 312 Gene3D G3DSA:3.40.50.1820 24 310 8.9E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_13625 c39a3b6186f54cc288148f680b3b0744 312 SUPERFAMILY SSF53474 6 310 4.67E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_01760 b03d0629a231e77e868019d13d496146 101 SMART SM00411 6 96 1.2E-36 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_01760 b03d0629a231e77e868019d13d496146 101 SUPERFAMILY SSF47729 6 97 1.91E-27 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C3Y93_01760 b03d0629a231e77e868019d13d496146 101 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 52 71 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 C3Y93_01760 b03d0629a231e77e868019d13d496146 101 Pfam PF00216 Bacterial DNA-binding protein 6 96 2.6E-27 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_01760 b03d0629a231e77e868019d13d496146 101 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 7 97 3.3E-38 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 C3Y93_01760 b03d0629a231e77e868019d13d496146 101 Gene3D G3DSA:4.10.520.10 6 98 2.8E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C3Y93_01760 b03d0629a231e77e868019d13d496146 101 PRINTS PR01727 Prokaryotic integration host factor signature 64 77 1.3E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_01760 b03d0629a231e77e868019d13d496146 101 PRINTS PR01727 Prokaryotic integration host factor signature 46 61 1.3E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_01760 b03d0629a231e77e868019d13d496146 101 PRINTS PR01727 Prokaryotic integration host factor signature 80 94 1.3E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_06355 0190c45db6980b25bc8f89159c5c88fb 219 Gene3D G3DSA:1.10.150.240 16 84 3.9E-59 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 C3Y93_06355 0190c45db6980b25bc8f89159c5c88fb 219 Gene3D G3DSA:3.40.50.1000 6 204 3.9E-59 T 14-10-2018 IPR023214 HAD superfamily C3Y93_06355 0190c45db6980b25bc8f89159c5c88fb 219 SUPERFAMILY SSF56784 2 217 6.62E-52 T 14-10-2018 IPR036412 HAD-like superfamily C3Y93_06355 0190c45db6980b25bc8f89159c5c88fb 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 1.0E-27 T 14-10-2018 C3Y93_06355 0190c45db6980b25bc8f89159c5c88fb 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 177 1.9E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3Y93_10130 825cb3c0595f04791b4ac27df78cf852 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 127 1.9E-40 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_10130 825cb3c0595f04791b4ac27df78cf852 273 SUPERFAMILY SSF55347 129 238 6.54E-37 T 14-10-2018 C3Y93_10130 825cb3c0595f04791b4ac27df78cf852 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 152 169 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_10130 825cb3c0595f04791b4ac27df78cf852 273 Gene3D G3DSA:3.30.360.10 129 236 5.2E-100 T 14-10-2018 C3Y93_10130 825cb3c0595f04791b4ac27df78cf852 273 SUPERFAMILY SSF51735 5 269 2.81E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_10130 825cb3c0595f04791b4ac27df78cf852 273 PIRSF PIRSF000161 3 270 4.7E-84 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_10130 825cb3c0595f04791b4ac27df78cf852 273 Gene3D G3DSA:3.40.50.720 7 266 5.2E-100 T 14-10-2018 C3Y93_10130 825cb3c0595f04791b4ac27df78cf852 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 267 34.818 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_10130 825cb3c0595f04791b4ac27df78cf852 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 130 266 1.5E-41 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_10130 825cb3c0595f04791b4ac27df78cf852 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 267 5.5E-97 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_05765 c444695b06ff53e0079f94005c2f0ca4 197 Pfam PF01810 LysE type translocator 12 190 1.6E-15 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 C3Y93_00975 aff026ec716c92609cca37c22fd2e6b8 888 Gene3D G3DSA:1.10.3210.10 444 570 1.1E-8 T 14-10-2018 C3Y93_00975 aff026ec716c92609cca37c22fd2e6b8 888 SUPERFAMILY SSF55021 809 858 4.04E-8 T 14-10-2018 C3Y93_00975 aff026ec716c92609cca37c22fd2e6b8 888 SUPERFAMILY SSF109604 424 547 1.88E-13 T 14-10-2018 C3Y93_00975 aff026ec716c92609cca37c22fd2e6b8 888 SMART SM00471 453 600 1.5E-6 T 14-10-2018 IPR003607 HD/PDEase domain C3Y93_00975 aff026ec716c92609cca37c22fd2e6b8 888 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 888 283.496 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 C3Y93_00975 aff026ec716c92609cca37c22fd2e6b8 888 Pfam PF01909 Nucleotidyltransferase domain 64 102 1.3E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 C3Y93_00975 aff026ec716c92609cca37c22fd2e6b8 888 Pfam PF08335 GlnD PII-uridylyltransferase 175 317 1.6E-36 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 C3Y93_00975 aff026ec716c92609cca37c22fd2e6b8 888 SUPERFAMILY SSF81301 35 166 1.7E-15 T 14-10-2018 C3Y93_00975 aff026ec716c92609cca37c22fd2e6b8 888 SUPERFAMILY SSF81593 194 312 4.08E-8 T 14-10-2018 C3Y93_00975 aff026ec716c92609cca37c22fd2e6b8 888 PIRSF PIRSF006288 10 884 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 C3Y93_00975 aff026ec716c92609cca37c22fd2e6b8 888 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 30 877 1.6E-268 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 C3Y93_00975 aff026ec716c92609cca37c22fd2e6b8 888 Pfam PF01966 HD domain 490 578 3.3E-8 T 14-10-2018 IPR006674 HD domain C3Y93_06515 37ff3c064736d3c6f945f6c6274e31ea 83 Gene3D G3DSA:3.30.300.90 1 82 4.8E-26 T 14-10-2018 C3Y93_06515 37ff3c064736d3c6f945f6c6274e31ea 83 SUPERFAMILY SSF82657 2 78 8.5E-24 T 14-10-2018 IPR036065 BolA-like superfamily C3Y93_06515 37ff3c064736d3c6f945f6c6274e31ea 83 PIRSF PIRSF003113 1 82 1.4E-20 T 14-10-2018 IPR002634 BolA protein C3Y93_06515 37ff3c064736d3c6f945f6c6274e31ea 83 Pfam PF01722 BolA-like protein 21 74 1.5E-12 T 14-10-2018 IPR002634 BolA protein C3Y93_07135 d4daabebcd1eb91d8aa51dc7f1ea4374 332 Pfam PF06144 DNA polymerase III, delta subunit 20 181 3.1E-12 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 C3Y93_07135 d4daabebcd1eb91d8aa51dc7f1ea4374 332 Gene3D G3DSA:3.40.50.300 7 134 3.0E-23 T 14-10-2018 C3Y93_07135 d4daabebcd1eb91d8aa51dc7f1ea4374 332 Gene3D G3DSA:1.20.272.10 210 330 1.3E-22 T 14-10-2018 C3Y93_07135 d4daabebcd1eb91d8aa51dc7f1ea4374 332 Gene3D G3DSA:1.10.8.60 145 209 1.1E-8 T 14-10-2018 C3Y93_07135 d4daabebcd1eb91d8aa51dc7f1ea4374 332 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 20 322 2.3E-43 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 C3Y93_07135 d4daabebcd1eb91d8aa51dc7f1ea4374 332 SUPERFAMILY SSF48019 208 324 3.15E-24 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 C3Y93_07135 d4daabebcd1eb91d8aa51dc7f1ea4374 332 SUPERFAMILY SSF52540 2 206 2.3E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_09155 9c3f78c08ab4757f59eabc7df17a6646 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 14 218 36.209 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 C3Y93_09155 9c3f78c08ab4757f59eabc7df17a6646 218 SUPERFAMILY SSF50475 16 218 4.91E-60 T 14-10-2018 C3Y93_09155 9c3f78c08ab4757f59eabc7df17a6646 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 C3Y93_09155 9c3f78c08ab4757f59eabc7df17a6646 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 3.5E-19 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 C3Y93_09155 9c3f78c08ab4757f59eabc7df17a6646 218 PIRSF PIRSF000190 2 218 7.1E-74 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 C3Y93_09155 9c3f78c08ab4757f59eabc7df17a6646 218 Gene3D G3DSA:2.30.110.10 5 218 4.7E-76 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 C3Y93_09155 9c3f78c08ab4757f59eabc7df17a6646 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 7 218 6.6E-76 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 C3Y93_09155 9c3f78c08ab4757f59eabc7df17a6646 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 123 4.0E-24 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 C3Y93_03335 23088ac56fc76cf69811df94c347f96f 317 SMART SM00342 223 306 2.2E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_03335 23088ac56fc76cf69811df94c347f96f 317 Gene3D G3DSA:1.10.10.60 203 312 6.1E-30 T 14-10-2018 C3Y93_03335 23088ac56fc76cf69811df94c347f96f 317 Gene3D G3DSA:2.60.120.10 12 92 2.0E-5 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3Y93_03335 23088ac56fc76cf69811df94c347f96f 317 SUPERFAMILY SSF46689 207 258 3.58E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_03335 23088ac56fc76cf69811df94c347f96f 317 Pfam PF12833 Helix-turn-helix domain 229 308 1.5E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_03335 23088ac56fc76cf69811df94c347f96f 317 SUPERFAMILY SSF51182 18 91 5.87E-6 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C3Y93_03335 23088ac56fc76cf69811df94c347f96f 317 Pfam PF12852 Cupin 2 190 1.9E-25 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain C3Y93_03335 23088ac56fc76cf69811df94c347f96f 317 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 260 302 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 C3Y93_03335 23088ac56fc76cf69811df94c347f96f 317 SUPERFAMILY SSF46689 260 312 2.02E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_03335 23088ac56fc76cf69811df94c347f96f 317 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 290 306 9.6E-8 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 C3Y93_03335 23088ac56fc76cf69811df94c347f96f 317 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 290 9.6E-8 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 C3Y93_03490 00887e0f1d079b0256c4794181efcb30 217 SUPERFAMILY SSF55469 1 215 2.22E-62 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3Y93_03490 00887e0f1d079b0256c4794181efcb30 217 Pfam PF00881 Nitroreductase family 8 193 3.1E-24 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 C3Y93_03490 00887e0f1d079b0256c4794181efcb30 217 Gene3D G3DSA:3.40.109.10 1 217 4.0E-57 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3Y93_08030 550bbce418819174faf46d2be519fb70 180 Gene3D G3DSA:2.60.40.200 30 180 3.7E-47 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 C3Y93_08030 550bbce418819174faf46d2be519fb70 180 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 46 180 1.2E-30 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 C3Y93_08030 550bbce418819174faf46d2be519fb70 180 SUPERFAMILY SSF49329 34 180 1.44E-42 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 C3Y93_08030 550bbce418819174faf46d2be519fb70 180 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 169 180 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 C3Y93_08030 550bbce418819174faf46d2be519fb70 180 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 75 85 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 C3Y93_08975 a5469346548da2726ba8183afb4e7813 234 SUPERFAMILY SSF53098 72 191 1.21E-7 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_08975 a5469346548da2726ba8183afb4e7813 234 Pfam PF13610 DDE domain 73 212 3.3E-50 T 14-10-2018 IPR032874 DDE domain C3Y93_09020 a5469346548da2726ba8183afb4e7813 234 SUPERFAMILY SSF53098 72 191 1.21E-7 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_09020 a5469346548da2726ba8183afb4e7813 234 Pfam PF13610 DDE domain 73 212 3.3E-50 T 14-10-2018 IPR032874 DDE domain C3Y93_02795 9cb6f579de89fb68c07de51aa2c95069 194 SUPERFAMILY SSF53955 52 192 3.56E-43 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3Y93_02795 9cb6f579de89fb68c07de51aa2c95069 194 Pfam PF00182 Chitinase class I 76 154 6.3E-10 T 14-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 C3Y93_02795 9cb6f579de89fb68c07de51aa2c95069 194 Gene3D G3DSA:1.10.530.70 47 192 2.4E-27 T 14-10-2018 C3Y93_02440 571e9253481876766e8e4bf714ce3e70 324 Hamap MF_00206 Lipoyl synthase [lipA]. 1 320 142.081 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3Y93_02440 571e9253481876766e8e4bf714ce3e70 324 Pfam PF04055 Radical SAM superfamily 88 248 2.1E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3Y93_02440 571e9253481876766e8e4bf714ce3e70 324 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 34 70 3.9E-7 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3Y93_02440 571e9253481876766e8e4bf714ce3e70 324 Gene3D G3DSA:3.20.20.70 80 282 2.9E-20 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_02440 571e9253481876766e8e4bf714ce3e70 324 PIRSF PIRSF005963 3 322 3.5E-127 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3Y93_02440 571e9253481876766e8e4bf714ce3e70 324 TIGRFAM TIGR00510 lipA: lipoyl synthase 29 311 1.6E-120 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3Y93_02440 571e9253481876766e8e4bf714ce3e70 324 SUPERFAMILY SSF102114 49 314 4.71E-61 T 14-10-2018 C3Y93_02440 571e9253481876766e8e4bf714ce3e70 324 SMART SM00729 81 289 9.6E-15 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3Y93_00825 c7f2876087d3737fefae40efedd28afb 151 Gene3D G3DSA:3.40.50.1240 1 147 4.0E-30 T 14-10-2018 IPR029033 Histidine phosphatase superfamily C3Y93_00825 c7f2876087d3737fefae40efedd28afb 151 SUPERFAMILY SSF53254 1 122 2.8E-21 T 14-10-2018 IPR029033 Histidine phosphatase superfamily C3Y93_00825 c7f2876087d3737fefae40efedd28afb 151 SMART SM00855 2 111 1.5E-9 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 C3Y93_00825 c7f2876087d3737fefae40efedd28afb 151 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 74 1.3E-12 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 C3Y93_05950 9ec7439a5ca946f433540fb96a00b368 372 Pfam PF08402 TOBE domain 281 353 2.0E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 C3Y93_05950 9ec7439a5ca946f433540fb96a00b368 372 Gene3D G3DSA:2.40.50.940 232 352 5.6E-8 T 14-10-2018 C3Y93_05950 9ec7439a5ca946f433540fb96a00b368 372 SUPERFAMILY SSF52540 12 253 3.64E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_05950 9ec7439a5ca946f433540fb96a00b368 372 SMART SM00382 36 221 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_05950 9ec7439a5ca946f433540fb96a00b368 372 Gene3D G3DSA:3.40.50.300 10 231 1.5E-62 T 14-10-2018 C3Y93_05950 9ec7439a5ca946f433540fb96a00b368 372 Pfam PF00005 ABC transporter 28 171 1.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_05950 9ec7439a5ca946f433540fb96a00b368 372 SUPERFAMILY SSF50331 248 353 3.74E-10 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal C3Y93_05950 9ec7439a5ca946f433540fb96a00b368 372 Gene3D G3DSA:2.40.50.140 287 345 5.6E-8 T 14-10-2018 C3Y93_05950 9ec7439a5ca946f433540fb96a00b368 372 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_03360 3cde7b2be4114f7689541f88e07672fd 162 Pfam PF02542 YgbB family 5 158 1.6E-66 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C3Y93_03360 3cde7b2be4114f7689541f88e07672fd 162 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C3Y93_03360 3cde7b2be4114f7689541f88e07672fd 162 Gene3D G3DSA:3.30.1330.50 2 162 2.4E-68 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C3Y93_03360 3cde7b2be4114f7689541f88e07672fd 162 SUPERFAMILY SSF69765 4 159 4.06E-65 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C3Y93_03360 3cde7b2be4114f7689541f88e07672fd 162 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 159 2.1E-67 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C3Y93_03360 3cde7b2be4114f7689541f88e07672fd 162 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 160 36.228 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C3Y93_01370 5d813e458213c8d34292b9e856f6ce90 302 Gene3D G3DSA:1.20.1510.10 18 213 5.4E-49 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3Y93_01370 5d813e458213c8d34292b9e856f6ce90 302 Pfam PF01545 Cation efflux family 22 213 1.1E-48 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C3Y93_01370 5d813e458213c8d34292b9e856f6ce90 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 19 292 3.8E-89 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C3Y93_01370 5d813e458213c8d34292b9e856f6ce90 302 SUPERFAMILY SSF160240 217 289 3.4E-6 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 C3Y93_01370 5d813e458213c8d34292b9e856f6ce90 302 SUPERFAMILY SSF161111 19 214 1.57E-59 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3Y93_08940 127957c2cc1aefac4e8fa8daaa8fe141 341 SUPERFAMILY SSF53098 117 287 3.22E-17 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_08940 127957c2cc1aefac4e8fa8daaa8fe141 341 Pfam PF00665 Integrase core domain 117 242 1.6E-25 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C3Y93_08940 127957c2cc1aefac4e8fa8daaa8fe141 341 Pfam PF13936 Helix-turn-helix domain 2 39 2.5E-6 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain C3Y93_08940 127957c2cc1aefac4e8fa8daaa8fe141 341 Gene3D G3DSA:1.10.10.60 1 41 1.8E-6 T 14-10-2018 C3Y93_08940 127957c2cc1aefac4e8fa8daaa8fe141 341 Gene3D G3DSA:3.30.420.10 112 286 2.3E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_04590 127957c2cc1aefac4e8fa8daaa8fe141 341 SUPERFAMILY SSF53098 117 287 3.22E-17 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_04590 127957c2cc1aefac4e8fa8daaa8fe141 341 Pfam PF00665 Integrase core domain 117 242 1.6E-25 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C3Y93_04590 127957c2cc1aefac4e8fa8daaa8fe141 341 Pfam PF13936 Helix-turn-helix domain 2 39 2.5E-6 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain C3Y93_04590 127957c2cc1aefac4e8fa8daaa8fe141 341 Gene3D G3DSA:1.10.10.60 1 41 1.8E-6 T 14-10-2018 C3Y93_04590 127957c2cc1aefac4e8fa8daaa8fe141 341 Gene3D G3DSA:3.30.420.10 112 286 2.3E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_02575 0ae6700c08358f011c10dd57ed86519f 62 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 59 2.5E-21 T 14-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 C3Y93_02575 0ae6700c08358f011c10dd57ed86519f 62 Gene3D G3DSA:3.30.920.30 1 59 4.6E-28 T 14-10-2018 IPR038570 HicA superfamily C3Y93_02575 0ae6700c08358f011c10dd57ed86519f 62 SUPERFAMILY SSF54786 1 61 1.02E-19 T 14-10-2018 C3Y93_04395 5511a7664463a8f59870d249a6db9442 302 Pfam PF01513 ATP-NAD kinase 53 273 1.6E-63 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 C3Y93_04395 5511a7664463a8f59870d249a6db9442 302 Hamap MF_00361 NAD kinase [nadK]. 9 290 32.064 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 C3Y93_04395 5511a7664463a8f59870d249a6db9442 302 Gene3D G3DSA:3.40.50.10330 33 290 2.9E-90 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 C3Y93_04395 5511a7664463a8f59870d249a6db9442 302 Gene3D G3DSA:2.60.200.30 131 267 2.9E-90 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 C3Y93_04395 5511a7664463a8f59870d249a6db9442 302 SUPERFAMILY SSF111331 10 293 2.49E-86 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily C3Y93_12905 183b0de6f7518234da87964ec3ed5710 238 SMART SM00448 8 118 3.5E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_12905 183b0de6f7518234da87964ec3ed5710 238 SUPERFAMILY SSF52172 8 131 1.57E-37 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_12905 183b0de6f7518234da87964ec3ed5710 238 Gene3D G3DSA:1.10.10.10 130 238 1.3E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_12905 183b0de6f7518234da87964ec3ed5710 238 SMART SM00862 155 231 2.8E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_12905 183b0de6f7518234da87964ec3ed5710 238 SUPERFAMILY SSF46894 135 232 5.95E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3Y93_12905 183b0de6f7518234da87964ec3ed5710 238 Gene3D G3DSA:3.40.50.2300 1 129 2.9E-36 T 14-10-2018 C3Y93_12905 183b0de6f7518234da87964ec3ed5710 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 1.3E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_12905 183b0de6f7518234da87964ec3ed5710 238 Pfam PF00072 Response regulator receiver domain 10 119 1.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_13505 8b7c3fe9dbc61756591b4266a434e2d1 295 Gene3D G3DSA:1.10.530.10 52 216 1.0E-49 T 14-10-2018 C3Y93_13505 8b7c3fe9dbc61756591b4266a434e2d1 295 SUPERFAMILY SSF53955 86 210 2.84E-48 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3Y93_13505 8b7c3fe9dbc61756591b4266a434e2d1 295 Pfam PF01464 Transglycosylase SLT domain 93 197 2.9E-30 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C3Y93_02200 5f4bd9af1c24c61e0e1d2d0b130f4779 102 Gene3D G3DSA:3.10.510.20 1 84 4.3E-28 T 14-10-2018 IPR038068 YcgL-like superfamily C3Y93_02200 5f4bd9af1c24c61e0e1d2d0b130f4779 102 Pfam PF05166 YcgL domain 3 85 3.1E-26 T 14-10-2018 IPR027354 YcgL domain C3Y93_02200 5f4bd9af1c24c61e0e1d2d0b130f4779 102 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 86 3.0E-31 T 14-10-2018 IPR027354 YcgL domain C3Y93_02200 5f4bd9af1c24c61e0e1d2d0b130f4779 102 SUPERFAMILY SSF160191 1 86 1.14E-25 T 14-10-2018 IPR038068 YcgL-like superfamily C3Y93_02200 5f4bd9af1c24c61e0e1d2d0b130f4779 102 Hamap MF_01866 Protein YcgL [ycgL]. 1 96 22.534 T 14-10-2018 IPR027354 YcgL domain C3Y93_09440 2a5d93a3c6555b114dec0cfb920002dc 283 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 56 281 3.2E-70 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 C3Y93_09440 2a5d93a3c6555b114dec0cfb920002dc 283 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 16 283 43.322 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 C3Y93_09440 2a5d93a3c6555b114dec0cfb920002dc 283 Pfam PF02666 Phosphatidylserine decarboxylase 69 280 4.6E-60 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 C3Y93_02025 c3b2e978050c4977c21a1cb8c9c101a8 244 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 43 98 3.0E-6 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 C3Y93_02025 c3b2e978050c4977c21a1cb8c9c101a8 244 Gene3D G3DSA:3.40.50.1240 26 209 3.5E-9 T 14-10-2018 IPR029033 Histidine phosphatase superfamily C3Y93_02025 c3b2e978050c4977c21a1cb8c9c101a8 244 SUPERFAMILY SSF53254 27 217 6.15E-14 T 14-10-2018 IPR029033 Histidine phosphatase superfamily C3Y93_06965 985c8a4b0ee5f402e3dfc3e622dc43bb 593 SUPERFAMILY SSF47203 288 475 7.89E-48 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3Y93_06965 985c8a4b0ee5f402e3dfc3e622dc43bb 593 Gene3D G3DSA:1.10.540.10 44 160 7.4E-94 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3Y93_06965 985c8a4b0ee5f402e3dfc3e622dc43bb 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 158 1.5E-14 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3Y93_06965 985c8a4b0ee5f402e3dfc3e622dc43bb 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 2.7E-17 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3Y93_06965 985c8a4b0ee5f402e3dfc3e622dc43bb 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 450 5.3E-17 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3Y93_06965 985c8a4b0ee5f402e3dfc3e622dc43bb 593 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 27 2.1E-6 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria C3Y93_06965 985c8a4b0ee5f402e3dfc3e622dc43bb 593 SUPERFAMILY SSF56645 38 279 2.62E-57 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3Y93_06965 985c8a4b0ee5f402e3dfc3e622dc43bb 593 Gene3D G3DSA:2.40.110.10 161 281 7.4E-94 T 14-10-2018 C3Y93_06965 985c8a4b0ee5f402e3dfc3e622dc43bb 593 Gene3D G3DSA:1.20.140.10 282 451 7.4E-94 T 14-10-2018 C3Y93_06965 985c8a4b0ee5f402e3dfc3e622dc43bb 593 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 584 3.5E-23 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain C3Y93_06110 b0af70d6a6ec3576bfe1dfc70403e658 227 SUPERFAMILY SSF56281 1 225 1.13E-51 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_06110 b0af70d6a6ec3576bfe1dfc70403e658 227 Gene3D G3DSA:3.60.15.10 1 227 1.1E-77 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_06110 b0af70d6a6ec3576bfe1dfc70403e658 227 SMART SM00849 12 171 4.6E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_06110 b0af70d6a6ec3576bfe1dfc70403e658 227 Pfam PF00753 Metallo-beta-lactamase superfamily 12 82 4.9E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_06110 b0af70d6a6ec3576bfe1dfc70403e658 227 Pfam PF00753 Metallo-beta-lactamase superfamily 91 171 5.5E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_07825 38896c278bc04b71539bc303099ccc09 282 Gene3D G3DSA:3.40.50.300 39 236 7.7E-49 T 14-10-2018 C3Y93_07825 38896c278bc04b71539bc303099ccc09 282 Pfam PF01926 50S ribosome-binding GTPase 64 179 4.1E-18 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_07825 38896c278bc04b71539bc303099ccc09 282 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 45 230 8.3E-73 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 C3Y93_07825 38896c278bc04b71539bc303099ccc09 282 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 50 234 26.87 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 C3Y93_07825 38896c278bc04b71539bc303099ccc09 282 SUPERFAMILY SSF52540 54 237 1.72E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_08480 95e1206fcda50420f14389cd5156ccc4 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 48.395 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 C3Y93_08480 95e1206fcda50420f14389cd5156ccc4 252 Pfam PF00977 Histidine biosynthesis protein 5 234 2.7E-88 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 C3Y93_08480 95e1206fcda50420f14389cd5156ccc4 252 Gene3D G3DSA:3.20.20.70 1 252 9.1E-110 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_08480 95e1206fcda50420f14389cd5156ccc4 252 SUPERFAMILY SSF51366 1 251 9.42E-86 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3Y93_08480 95e1206fcda50420f14389cd5156ccc4 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 4.4E-113 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 C3Y93_03860 338f15b85e8d342d219175941fd2e797 114 TIGRFAM TIGR02809 phasin_3: phasin family protein 5 110 5.4E-35 T 14-10-2018 IPR014176 Phasin, subfamily 3 C3Y93_03860 338f15b85e8d342d219175941fd2e797 114 Pfam PF09361 Phasin protein 10 109 4.3E-17 T 14-10-2018 IPR018968 Phasin C3Y93_09015 75f0e994ecf8875548bb30c931f3dc0d 324 Gene3D G3DSA:1.20.58.1130 10 206 5.1E-84 T 14-10-2018 C3Y93_09015 75f0e994ecf8875548bb30c931f3dc0d 324 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 313 4.4E-68 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 C3Y93_09015 75f0e994ecf8875548bb30c931f3dc0d 324 Pfam PF01699 Sodium/calcium exchanger protein 6 145 2.3E-23 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 C3Y93_09015 75f0e994ecf8875548bb30c931f3dc0d 324 Pfam PF01699 Sodium/calcium exchanger protein 178 319 2.2E-29 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 C3Y93_09015 75f0e994ecf8875548bb30c931f3dc0d 324 Gene3D G3DSA:1.20.1420.30 36 312 5.1E-84 T 14-10-2018 C3Y93_02380 7bf24821b5a4187fce278bd79f6c57c8 209 SUPERFAMILY SSF53335 6 188 4.27E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_02380 7bf24821b5a4187fce278bd79f6c57c8 209 Pfam PF13649 Methyltransferase domain 43 138 7.7E-10 T 14-10-2018 C3Y93_02380 7bf24821b5a4187fce278bd79f6c57c8 209 Gene3D G3DSA:3.40.50.150 7 209 3.4E-36 T 14-10-2018 C3Y93_10195 dafd6ed0d30c45054e4f551f5b4bfd57 368 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 1 307 1.1E-98 T 14-10-2018 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase C3Y93_10195 dafd6ed0d30c45054e4f551f5b4bfd57 368 SUPERFAMILY SSF53756 176 360 6.28E-11 T 14-10-2018 C3Y93_10195 dafd6ed0d30c45054e4f551f5b4bfd57 368 Gene3D G3DSA:3.40.50.11190 1 175 6.6E-47 T 14-10-2018 C3Y93_10195 dafd6ed0d30c45054e4f551f5b4bfd57 368 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 208 339 1.5E-11 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 C3Y93_10195 dafd6ed0d30c45054e4f551f5b4bfd57 368 Gene3D G3DSA:3.40.50.2000 176 325 9.6E-40 T 14-10-2018 C3Y93_13410 372d5a429dca8ec17a8ca9b460f11cf4 590 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 48 137 6.6E-32 T 14-10-2018 IPR032093 Phospholipase D, N-terminal C3Y93_13410 372d5a429dca8ec17a8ca9b460f11cf4 590 Gene3D G3DSA:2.60.40.380 39 140 1.4E-35 T 14-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 C3Y93_13410 372d5a429dca8ec17a8ca9b460f11cf4 590 SUPERFAMILY SSF56300 140 554 1.39E-34 T 14-10-2018 C3Y93_13410 372d5a429dca8ec17a8ca9b460f11cf4 590 Pfam PF09423 PhoD-like phosphatase 147 553 2.0E-120 T 14-10-2018 IPR018946 Alkaline phosphatase D-related C3Y93_06755 4b2bd110644647703864ec47319c27ee 281 Gene3D G3DSA:3.30.1300.10 178 281 1.1E-29 T 14-10-2018 C3Y93_06755 4b2bd110644647703864ec47319c27ee 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 277 8.9E-101 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 C3Y93_06755 4b2bd110644647703864ec47319c27ee 281 Pfam PF02569 Pantoate-beta-alanine ligase 5 275 9.1E-104 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 C3Y93_06755 4b2bd110644647703864ec47319c27ee 281 Hamap MF_00158 Pantothenate synthetase [panC]. 2 277 40.916 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 C3Y93_06755 4b2bd110644647703864ec47319c27ee 281 Gene3D G3DSA:3.40.50.620 1 177 7.6E-76 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_06755 4b2bd110644647703864ec47319c27ee 281 SUPERFAMILY SSF52374 1 278 3.22E-106 T 14-10-2018 C3Y93_06755 4b2bd110644647703864ec47319c27ee 281 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 68 2.2E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C3Y93_03825 85729d9037288aab7d7c544c67a9543e 129 Pfam PF01250 Ribosomal protein S6 3 91 2.7E-25 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03825 85729d9037288aab7d7c544c67a9543e 129 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.1E-32 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03825 85729d9037288aab7d7c544c67a9543e 129 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 20.619 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 C3Y93_03825 85729d9037288aab7d7c544c67a9543e 129 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 C3Y93_03825 85729d9037288aab7d7c544c67a9543e 129 SUPERFAMILY SSF54995 1 101 4.45E-36 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03825 85729d9037288aab7d7c544c67a9543e 129 Gene3D G3DSA:3.30.70.60 1 92 1.7E-29 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 C3Y93_01310 5eea404620ac6de6128c722e144cfb0e 398 SUPERFAMILY SSF53335 15 349 6.17E-79 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_01310 5eea404620ac6de6128c722e144cfb0e 398 Gene3D G3DSA:3.40.50.150 128 397 6.9E-101 T 14-10-2018 C3Y93_01310 5eea404620ac6de6128c722e144cfb0e 398 PIRSF PIRSF003085 6 397 1.1E-120 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 C3Y93_01310 5eea404620ac6de6128c722e144cfb0e 398 Pfam PF02353 Mycolic acid cyclopropane synthetase 124 387 1.4E-83 T 14-10-2018 C3Y93_07915 25c69f41883d0e7fff2c36838e4c04a6 636 Pfam PF02780 Transketolase, C-terminal domain 506 619 3.7E-24 T 14-10-2018 IPR033248 Transketolase, C-terminal domain C3Y93_07915 25c69f41883d0e7fff2c36838e4c04a6 636 Gene3D G3DSA:3.40.50.970 314 488 4.4E-67 T 14-10-2018 C3Y93_07915 25c69f41883d0e7fff2c36838e4c04a6 636 SUPERFAMILY SSF52922 489 624 3.01E-27 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3Y93_07915 25c69f41883d0e7fff2c36838e4c04a6 636 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 16 284 2.2E-103 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3Y93_07915 25c69f41883d0e7fff2c36838e4c04a6 636 SMART SM00861 316 480 2.4E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C3Y93_07915 25c69f41883d0e7fff2c36838e4c04a6 636 SUPERFAMILY SSF52518 316 498 1.74E-57 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3Y93_07915 25c69f41883d0e7fff2c36838e4c04a6 636 SUPERFAMILY SSF52518 12 378 1.39E-72 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3Y93_07915 25c69f41883d0e7fff2c36838e4c04a6 636 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 18 625 8.3E-235 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3Y93_07915 25c69f41883d0e7fff2c36838e4c04a6 636 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3Y93_07915 25c69f41883d0e7fff2c36838e4c04a6 636 Pfam PF02779 Transketolase, pyrimidine binding domain 316 476 5.5E-38 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C3Y93_07915 25c69f41883d0e7fff2c36838e4c04a6 636 Gene3D G3DSA:3.40.50.920 501 632 7.4E-36 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C3Y93_07915 25c69f41883d0e7fff2c36838e4c04a6 636 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 15 628 41.545 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C3Y93_10165 9f15e3221797cc05da86b5435d6cb11e 425 SUPERFAMILY SSF51735 8 192 3.35E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_10165 9f15e3221797cc05da86b5435d6cb11e 425 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 8 412 1.9E-123 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 C3Y93_10165 9f15e3221797cc05da86b5435d6cb11e 425 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 318 417 1.4E-22 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3Y93_10165 9f15e3221797cc05da86b5435d6cb11e 425 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 8 180 2.2E-34 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3Y93_10165 9f15e3221797cc05da86b5435d6cb11e 425 PIRSF PIRSF500136 1 425 4.2E-154 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 C3Y93_10165 9f15e3221797cc05da86b5435d6cb11e 425 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 203 291 7.0E-24 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3Y93_10165 9f15e3221797cc05da86b5435d6cb11e 425 Gene3D G3DSA:3.40.50.720 3 199 1.7E-58 T 14-10-2018 C3Y93_10165 9f15e3221797cc05da86b5435d6cb11e 425 Gene3D G3DSA:3.40.50.720 201 424 7.0E-57 T 14-10-2018 C3Y93_10165 9f15e3221797cc05da86b5435d6cb11e 425 PIRSF PIRSF000124 7 423 4.4E-56 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 C3Y93_10165 9f15e3221797cc05da86b5435d6cb11e 425 SMART SM00984 318 418 8.6E-37 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C3Y93_10165 9f15e3221797cc05da86b5435d6cb11e 425 SUPERFAMILY SSF48179 202 292 1.7E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3Y93_10165 9f15e3221797cc05da86b5435d6cb11e 425 SUPERFAMILY SSF52413 301 417 8.63E-29 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 C3Y93_08510 935bb883b755add005b62e9df68e6f38 358 SMART SM00477 83 271 1.6E-33 T 14-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 C3Y93_08510 935bb883b755add005b62e9df68e6f38 358 SMART SM00892 82 271 1.0E-37 T 14-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 C3Y93_08510 935bb883b755add005b62e9df68e6f38 358 Pfam PF01223 DNA/RNA non-specific endonuclease 73 268 5.9E-42 T 14-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 C3Y93_08510 935bb883b755add005b62e9df68e6f38 358 SUPERFAMILY SSF54060 57 278 4.77E-62 T 14-10-2018 C3Y93_08510 935bb883b755add005b62e9df68e6f38 358 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 142 150 - T 14-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 C3Y93_08510 935bb883b755add005b62e9df68e6f38 358 Gene3D G3DSA:3.40.570.10 72 278 2.6E-54 T 14-10-2018 C3Y93_06875 6b505690a5a5e3884ba920307a59c83f 914 SUPERFAMILY SSF81301 3 259 4.25E-68 T 14-10-2018 C3Y93_06875 6b505690a5a5e3884ba920307a59c83f 914 Gene3D G3DSA:3.30.460.100 13 254 1.4E-58 T 14-10-2018 C3Y93_06875 6b505690a5a5e3884ba920307a59c83f 914 Gene3D G3DSA:3.30.460.100 518 769 1.6E-75 T 14-10-2018 C3Y93_06875 6b505690a5a5e3884ba920307a59c83f 914 Gene3D G3DSA:1.20.120.1510 409 517 8.0E-17 T 14-10-2018 C3Y93_06875 6b505690a5a5e3884ba920307a59c83f 914 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 1 907 18.153 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 C3Y93_06875 6b505690a5a5e3884ba920307a59c83f 914 Pfam PF08335 GlnD PII-uridylyltransferase 785 880 2.0E-9 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 C3Y93_06875 6b505690a5a5e3884ba920307a59c83f 914 Pfam PF08335 GlnD PII-uridylyltransferase 270 409 3.9E-43 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 C3Y93_06875 6b505690a5a5e3884ba920307a59c83f 914 SUPERFAMILY SSF81593 260 409 7.38E-40 T 14-10-2018 C3Y93_06875 6b505690a5a5e3884ba920307a59c83f 914 SUPERFAMILY SSF81593 774 905 1.49E-30 T 14-10-2018 C3Y93_06875 6b505690a5a5e3884ba920307a59c83f 914 Gene3D G3DSA:1.20.120.330 770 907 1.5E-43 T 14-10-2018 C3Y93_06875 6b505690a5a5e3884ba920307a59c83f 914 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 4 244 2.2E-62 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 C3Y93_06875 6b505690a5a5e3884ba920307a59c83f 914 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 509 762 1.9E-68 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 C3Y93_06875 6b505690a5a5e3884ba920307a59c83f 914 SUPERFAMILY SSF81301 481 773 2.78E-76 T 14-10-2018 C3Y93_06875 6b505690a5a5e3884ba920307a59c83f 914 Gene3D G3DSA:1.20.120.330 258 408 3.3E-50 T 14-10-2018 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 Pfam PF13432 Tetratricopeptide repeat 461 515 0.0026 T 14-10-2018 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 Pfam PF13432 Tetratricopeptide repeat 252 307 0.0053 T 14-10-2018 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 Gene3D G3DSA:1.25.40.10 168 343 7.6E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 SUPERFAMILY SSF48452 385 554 1.73E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 Gene3D G3DSA:1.25.40.10 345 464 5.1E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 SUPERFAMILY SSF48452 179 341 2.47E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 Gene3D G3DSA:1.25.40.10 26 167 8.8E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 Gene3D G3DSA:1.25.40.10 465 563 1.0E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 SUPERFAMILY SSF48452 47 145 6.45E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 SMART SM00028 486 519 81.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 SMART SM00028 383 416 28.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 SMART SM00028 456 485 470.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 SMART SM00028 180 213 9.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 SMART SM00028 114 147 6.4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3Y93_13180 d8575037deeb30e30b4eb108d89e1ef3 570 SMART SM00028 214 247 420.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3Y93_03255 1d51308273d9c219599b36819d2c6e31 202 Pfam PF07290 Protein of unknown function (DUF1449) 11 191 2.0E-24 T 14-10-2018 IPR010840 Protein of unknown function DUF1449 C3Y93_06620 712708661f358e52f89c60f3fa04f082 275 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 9 100 2.8E-21 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal C3Y93_06620 712708661f358e52f89c60f3fa04f082 275 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 7 267 26.133 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 C3Y93_06620 712708661f358e52f89c60f3fa04f082 275 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 9 267 1.5E-76 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 C3Y93_06620 712708661f358e52f89c60f3fa04f082 275 Gene3D G3DSA:1.10.3730.10 165 272 4.4E-40 T 14-10-2018 C3Y93_06620 712708661f358e52f89c60f3fa04f082 275 SUPERFAMILY SSF51735 8 160 2.3E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_06620 712708661f358e52f89c60f3fa04f082 275 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 267 2.5E-34 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 C3Y93_06620 712708661f358e52f89c60f3fa04f082 275 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 245 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 C3Y93_06620 712708661f358e52f89c60f3fa04f082 275 PIRSF PIRSF000193 7 270 3.7E-73 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 C3Y93_06620 712708661f358e52f89c60f3fa04f082 275 SUPERFAMILY SSF48179 163 270 3.57E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3Y93_06620 712708661f358e52f89c60f3fa04f082 275 Gene3D G3DSA:3.40.50.720 3 164 1.5E-47 T 14-10-2018 C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 SUPERFAMILY SSF52218 416 563 2.43E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 Gene3D G3DSA:3.40.50.360 416 560 2.8E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 Pfam PF00175 Oxidoreductase NAD-binding domain 742 846 5.3E-11 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 SUPERFAMILY SSF63380 570 731 1.81E-18 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 831 839 5.5E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 740 759 5.5E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 676 683 5.5E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 808 824 5.5E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 764 773 5.5E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 PRINTS PR00369 Flavodoxin signature 498 508 3.9E-8 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 PRINTS PR00369 Flavodoxin signature 419 432 3.9E-8 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 PRINTS PR00369 Flavodoxin signature 467 478 3.9E-8 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 Pfam PF03929 PepSY-associated TM region 7 392 1.1E-66 T 14-10-2018 IPR005625 PepSY-associated TM protein C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 Pfam PF00258 Flavodoxin 420 545 3.6E-21 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 Gene3D G3DSA:3.40.50.80 730 872 2.6E-41 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_05610 09dbcbb9d0606a67146ead446b39403d 872 SUPERFAMILY SSF52343 734 872 1.18E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_00715 6512447147eaf6711efa2eaaff3f6ec8 533 SUPERFAMILY SSF52096 237 515 2.55E-85 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_00715 6512447147eaf6711efa2eaaff3f6ec8 533 Pfam PF01039 Carboxyl transferase domain 48 523 5.2E-152 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 C3Y93_00715 6512447147eaf6711efa2eaaff3f6ec8 533 SUPERFAMILY SSF52096 23 269 1.71E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_00715 6512447147eaf6711efa2eaaff3f6ec8 533 Gene3D G3DSA:3.90.226.10 1 271 1.3E-97 T 14-10-2018 C3Y93_00715 6512447147eaf6711efa2eaaff3f6ec8 533 Gene3D G3DSA:3.90.226.10 272 533 3.4E-101 T 14-10-2018 C3Y93_07295 23c79d04d80dcc99702c1bdc6f41605a 307 SUPERFAMILY SSF103481 222 303 1.31E-11 T 14-10-2018 C3Y93_07295 23c79d04d80dcc99702c1bdc6f41605a 307 SUPERFAMILY SSF103481 46 150 1.07E-12 T 14-10-2018 C3Y93_07295 23c79d04d80dcc99702c1bdc6f41605a 307 Pfam PF00892 EamA-like transporter family 9 146 7.3E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_07295 23c79d04d80dcc99702c1bdc6f41605a 307 Pfam PF00892 EamA-like transporter family 161 299 1.1E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_13175 4159591ef478f6f2d6ae0c3e1dd7fba8 192 SUPERFAMILY SSF89392 21 190 1.84E-35 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX C3Y93_13175 4159591ef478f6f2d6ae0c3e1dd7fba8 192 Pfam PF03550 Outer membrane lipoprotein LolB 41 191 3.8E-39 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 C3Y93_13175 4159591ef478f6f2d6ae0c3e1dd7fba8 192 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 12 190 1.1E-30 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 C3Y93_13175 4159591ef478f6f2d6ae0c3e1dd7fba8 192 Gene3D G3DSA:2.50.20.10 24 191 7.9E-35 T 14-10-2018 C3Y93_09590 d69aa7e448bbbffe5e2c6e6198c1887f 281 PIRSF PIRSF006250 6 281 4.9E-97 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 C3Y93_09590 d69aa7e448bbbffe5e2c6e6198c1887f 281 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 24 112 6.8E-25 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 C3Y93_09590 d69aa7e448bbbffe5e2c6e6198c1887f 281 SUPERFAMILY SSF54675 7 112 9.42E-31 T 14-10-2018 C3Y93_09590 d69aa7e448bbbffe5e2c6e6198c1887f 281 Gene3D G3DSA:3.90.1170.20 10 278 2.7E-111 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 C3Y93_09590 d69aa7e448bbbffe5e2c6e6198c1887f 281 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 114 278 7.9E-59 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 C3Y93_09590 d69aa7e448bbbffe5e2c6e6198c1887f 281 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 16 279 3.2E-96 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 C3Y93_09590 d69aa7e448bbbffe5e2c6e6198c1887f 281 Gene3D G3DSA:3.20.20.70 123 269 2.7E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_09590 d69aa7e448bbbffe5e2c6e6198c1887f 281 SUPERFAMILY SSF51690 114 279 1.81E-60 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 C3Y93_02730 20c14e6b0bd95d89ea287eafe3eb09c6 103 Pfam PF01022 Bacterial regulatory protein, arsR family 27 72 3.6E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3Y93_02730 20c14e6b0bd95d89ea287eafe3eb09c6 103 SMART SM00418 19 97 6.5E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3Y93_02730 20c14e6b0bd95d89ea287eafe3eb09c6 103 Gene3D G3DSA:1.10.10.10 7 102 1.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_02730 20c14e6b0bd95d89ea287eafe3eb09c6 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 1.2E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3Y93_02730 20c14e6b0bd95d89ea287eafe3eb09c6 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 1.2E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3Y93_02730 20c14e6b0bd95d89ea287eafe3eb09c6 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 1.2E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3Y93_02730 20c14e6b0bd95d89ea287eafe3eb09c6 103 SUPERFAMILY SSF46785 12 100 1.16E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_02535 8663cdabc36915a33ab66d464453bb63 236 Gene3D G3DSA:3.40.50.1110 22 235 2.7E-24 T 14-10-2018 IPR036514 SGNH hydrolase superfamily C3Y93_02535 8663cdabc36915a33ab66d464453bb63 236 SUPERFAMILY SSF52266 44 234 1.83E-33 T 14-10-2018 C3Y93_02535 8663cdabc36915a33ab66d464453bb63 236 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 50 223 4.3E-15 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain C3Y93_12600 2e9eacca7e2ae3164db80a335cc805c5 328 PIRSF PIRSF025648 2 328 6.5E-135 T 14-10-2018 IPR010190 Diaminopimelate dehydrogenase, Ddh GO:0009089|GO:0047850 KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 C3Y93_12600 2e9eacca7e2ae3164db80a335cc805c5 328 SUPERFAMILY SSF55347 125 276 9.81E-59 T 14-10-2018 C3Y93_12600 2e9eacca7e2ae3164db80a335cc805c5 328 SUPERFAMILY SSF51735 4 150 2.73E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_12600 2e9eacca7e2ae3164db80a335cc805c5 328 Pfam PF16654 Diaminopimelic acid dehydrogenase C-terminal domain 124 277 1.7E-76 T 14-10-2018 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 C3Y93_12600 2e9eacca7e2ae3164db80a335cc805c5 328 Gene3D G3DSA:3.40.50.720 5 312 1.4E-122 T 14-10-2018 C3Y93_12600 2e9eacca7e2ae3164db80a335cc805c5 328 Gene3D G3DSA:3.30.360.10 133 272 1.4E-122 T 14-10-2018 C3Y93_12600 2e9eacca7e2ae3164db80a335cc805c5 328 TIGRFAM TIGR01921 DAP-DH: diaminopimelate dehydrogenase 4 328 2.7E-136 T 14-10-2018 IPR010190 Diaminopimelate dehydrogenase, Ddh GO:0009089|GO:0047850 KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 C3Y93_10150 542559594c778d681e6008170ea1d982 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 98 111 4.0E-20 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C3Y93_10150 542559594c778d681e6008170ea1d982 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 42 58 4.0E-20 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C3Y93_10150 542559594c778d681e6008170ea1d982 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 4.0E-20 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C3Y93_10150 542559594c778d681e6008170ea1d982 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 76 91 4.0E-20 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C3Y93_10150 542559594c778d681e6008170ea1d982 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 4.0E-20 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C3Y93_10150 542559594c778d681e6008170ea1d982 142 Gene3D G3DSA:3.40.50.2300 1 142 2.2E-45 T 14-10-2018 C3Y93_10150 542559594c778d681e6008170ea1d982 142 SUPERFAMILY SSF52788 2 142 1.83E-40 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily C3Y93_10150 542559594c778d681e6008170ea1d982 142 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 138 2.7E-36 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I C3Y93_10150 542559594c778d681e6008170ea1d982 142 SMART SM00226 4 141 7.4E-54 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I C3Y93_05510 6311ccd5c8b27c4be916133894050bf4 533 PIRSF PIRSF001362 416 533 3.0E-7 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 C3Y93_05510 6311ccd5c8b27c4be916133894050bf4 533 PIRSF PIRSF001362 289 409 6.6E-13 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 C3Y93_05510 6311ccd5c8b27c4be916133894050bf4 533 PIRSF PIRSF001362 3 277 1.8E-30 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 C3Y93_05510 6311ccd5c8b27c4be916133894050bf4 533 Pfam PF00463 Isocitrate lyase family 425 531 4.2E-11 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 C3Y93_05510 6311ccd5c8b27c4be916133894050bf4 533 Pfam PF00463 Isocitrate lyase family 317 396 1.0E-11 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 C3Y93_05510 6311ccd5c8b27c4be916133894050bf4 533 Pfam PF00463 Isocitrate lyase family 98 270 1.1E-24 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 C3Y93_05510 6311ccd5c8b27c4be916133894050bf4 533 Gene3D G3DSA:3.20.20.60 410 532 1.5E-18 T 14-10-2018 C3Y93_05510 6311ccd5c8b27c4be916133894050bf4 533 SUPERFAMILY SSF51621 8 515 1.88E-125 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C3Y93_06450 ab5e7823172d3186bd5a25f02538238c 198 SUPERFAMILY SSF55811 20 177 5.01E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3Y93_06450 ab5e7823172d3186bd5a25f02538238c 198 Gene3D G3DSA:3.90.79.10 4 180 6.5E-44 T 14-10-2018 C3Y93_06450 ab5e7823172d3186bd5a25f02538238c 198 Pfam PF00293 NUDIX domain 24 136 2.4E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3Y93_12530 fc1760695d358a71a7aed4710e5e354b 272 SUPERFAMILY SSF69593 36 196 1.57E-21 T 14-10-2018 C3Y93_12530 fc1760695d358a71a7aed4710e5e354b 272 SMART SM00563 83 194 7.5E-17 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3Y93_12530 fc1760695d358a71a7aed4710e5e354b 272 Pfam PF01553 Acyltransferase 72 189 1.2E-16 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3Y93_13225 662c25becac2b91eedefcc4f65c9b814 87 Pfam PF00037 4Fe-4S binding domain 5 25 1.8E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3Y93_13225 662c25becac2b91eedefcc4f65c9b814 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3Y93_13225 662c25becac2b91eedefcc4f65c9b814 87 SUPERFAMILY SSF54862 4 76 3.07E-19 T 14-10-2018 C3Y93_13225 662c25becac2b91eedefcc4f65c9b814 87 Gene3D G3DSA:3.30.70.20 2 83 9.6E-32 T 14-10-2018 C3Y93_01810 0d65ccd5f428d3f6c4346e7c89a024d0 339 Gene3D G3DSA:1.10.10.60 1 41 3.4E-8 T 14-10-2018 C3Y93_01810 0d65ccd5f428d3f6c4346e7c89a024d0 339 SUPERFAMILY SSF53098 117 288 2.88E-19 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_01810 0d65ccd5f428d3f6c4346e7c89a024d0 339 Pfam PF00665 Integrase core domain 117 242 1.6E-25 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C3Y93_01810 0d65ccd5f428d3f6c4346e7c89a024d0 339 Gene3D G3DSA:3.30.420.10 115 296 4.7E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_01810 0d65ccd5f428d3f6c4346e7c89a024d0 339 Pfam PF13936 Helix-turn-helix domain 2 41 1.8E-9 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain C3Y93_14200 beac0fa916922723eb7b706c22cee384 961 Gene3D G3DSA:1.20.58.910 698 784 1.3E-19 T 14-10-2018 C3Y93_14200 beac0fa916922723eb7b706c22cee384 961 SUPERFAMILY SSF52540 261 664 2.92E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_14200 beac0fa916922723eb7b706c22cee384 961 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 700 957 4.2E-49 T 14-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal C3Y93_14200 beac0fa916922723eb7b706c22cee384 961 Gene3D G3DSA:3.90.640.50 29 96 9.9E-71 T 14-10-2018 C3Y93_14200 beac0fa916922723eb7b706c22cee384 961 SMART SM00487 237 432 5.8E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3Y93_14200 beac0fa916922723eb7b706c22cee384 961 Gene3D G3DSA:3.40.50.300 431 697 1.3E-90 T 14-10-2018 C3Y93_14200 beac0fa916922723eb7b706c22cee384 961 Pfam PF04851 Type III restriction enzyme, res subunit 239 403 1.9E-36 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 C3Y93_14200 beac0fa916922723eb7b706c22cee384 961 SUPERFAMILY SSF52540 209 407 1.37E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_14200 beac0fa916922723eb7b706c22cee384 961 Gene3D G3DSA:3.90.1570.50 4 231 9.9E-71 T 14-10-2018 C3Y93_14200 beac0fa916922723eb7b706c22cee384 961 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 7 694 6.8E-146 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 C3Y93_14200 beac0fa916922723eb7b706c22cee384 961 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 187 1.2E-30 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 C3Y93_14200 beac0fa916922723eb7b706c22cee384 961 Gene3D G3DSA:3.40.50.300 240 430 2.8E-63 T 14-10-2018 C3Y93_06245 c9ade181f9753f442480bc92c51da302 679 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 272 5.8E-72 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 C3Y93_06245 c9ade181f9753f442480bc92c51da302 679 SUPERFAMILY SSF52540 5 647 9.5E-157 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_06245 c9ade181f9753f442480bc92c51da302 679 Pfam PF13361 UvrD-like helicase C-terminal domain 278 622 4.9E-69 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C3Y93_06245 c9ade181f9753f442480bc92c51da302 679 Gene3D G3DSA:1.10.10.160 112 188 1.4E-91 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily C3Y93_06245 c9ade181f9753f442480bc92c51da302 679 Gene3D G3DSA:3.40.50.300 281 641 1.3E-116 T 14-10-2018 C3Y93_06245 c9ade181f9753f442480bc92c51da302 679 Gene3D G3DSA:3.40.50.300 8 273 1.4E-91 T 14-10-2018 C3Y93_06245 c9ade181f9753f442480bc92c51da302 679 Gene3D G3DSA:1.10.486.10 384 553 1.3E-116 T 14-10-2018 C3Y93_06245 c9ade181f9753f442480bc92c51da302 679 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 5 678 39.098 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 C3Y93_06015 2f7b85bb859fe9a39f3f42b96c5968cb 104 Gene3D G3DSA:1.10.20.60 9 102 3.1E-20 T 14-10-2018 C3Y93_06015 2f7b85bb859fe9a39f3f42b96c5968cb 104 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 28 99 4.7E-16 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 C3Y93_06015 2f7b85bb859fe9a39f3f42b96c5968cb 104 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 13 104 2.3E-27 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 C3Y93_06015 2f7b85bb859fe9a39f3f42b96c5968cb 104 SUPERFAMILY SSF141000 12 102 4.58E-27 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 C3Y93_06015 2f7b85bb859fe9a39f3f42b96c5968cb 104 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 11 104 22.377 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 C3Y93_10985 819416145352265920aa8a8dac5ec4c0 445 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 19 440 2.4E-74 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 C3Y93_10985 819416145352265920aa8a8dac5ec4c0 445 SUPERFAMILY SSF56954 2 431 1.06E-83 T 14-10-2018 C3Y93_10985 819416145352265920aa8a8dac5ec4c0 445 Pfam PF02321 Outer membrane efflux protein 23 217 3.2E-20 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3Y93_10985 819416145352265920aa8a8dac5ec4c0 445 Pfam PF02321 Outer membrane efflux protein 240 426 1.7E-31 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3Y93_10985 819416145352265920aa8a8dac5ec4c0 445 Gene3D G3DSA:1.20.1600.10 21 444 2.8E-97 T 14-10-2018 C3Y93_09520 ead75f6a6954d222081a4685b02fd148 422 Gene3D G3DSA:1.20.272.10 224 328 2.3E-45 T 14-10-2018 C3Y93_09520 ead75f6a6954d222081a4685b02fd148 422 Gene3D G3DSA:3.40.50.300 1 152 3.6E-44 T 14-10-2018 C3Y93_09520 ead75f6a6954d222081a4685b02fd148 422 Pfam PF16193 AAA C-terminal domain 180 250 1.7E-22 T 14-10-2018 IPR032423 AAA C-terminal domain C3Y93_09520 ead75f6a6954d222081a4685b02fd148 422 Gene3D G3DSA:1.10.3710.10 329 422 1.9E-30 T 14-10-2018 C3Y93_09520 ead75f6a6954d222081a4685b02fd148 422 SUPERFAMILY SSF52540 4 219 3.44E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_09520 ead75f6a6954d222081a4685b02fd148 422 Gene3D G3DSA:1.10.8.60 153 223 3.9E-7 T 14-10-2018 C3Y93_09520 ead75f6a6954d222081a4685b02fd148 422 SUPERFAMILY SSF48019 236 418 2.83E-73 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 C3Y93_09520 ead75f6a6954d222081a4685b02fd148 422 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 45 147 5.2E-16 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3Y93_09520 ead75f6a6954d222081a4685b02fd148 422 SMART SM00382 41 153 2.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_09520 ead75f6a6954d222081a4685b02fd148 422 Pfam PF12002 MgsA AAA+ ATPase C terminal 251 410 2.6E-67 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal C3Y93_03160 a1d60273e117c053cb57733a19799c59 294 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 8 291 3.3E-124 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 C3Y93_03160 a1d60273e117c053cb57733a19799c59 294 Gene3D G3DSA:3.20.20.60 1 294 4.8E-99 T 14-10-2018 C3Y93_03160 a1d60273e117c053cb57733a19799c59 294 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 254 2.8E-49 T 14-10-2018 C3Y93_03160 a1d60273e117c053cb57733a19799c59 294 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 C3Y93_03160 a1d60273e117c053cb57733a19799c59 294 SUPERFAMILY SSF51621 8 290 2.2E-99 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C3Y93_03160 a1d60273e117c053cb57733a19799c59 294 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 5 292 47.305 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 C3Y93_05090 0f19c782c285b73c9eb100a1b6fdd6e4 2991 SMART SM00912 80 204 2.6E-40 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal C3Y93_05090 0f19c782c285b73c9eb100a1b6fdd6e4 2991 Gene3D G3DSA:2.160.20.10 66 362 4.9E-92 T 14-10-2018 IPR012334 Pectin lyase fold C3Y93_05090 0f19c782c285b73c9eb100a1b6fdd6e4 2991 Pfam PF13332 Haemagluttinin repeat 1863 1928 4.1E-4 T 14-10-2018 IPR025157 Hemagglutinin repeat C3Y93_05090 0f19c782c285b73c9eb100a1b6fdd6e4 2991 Pfam PF13332 Haemagluttinin repeat 1933 2006 1.1E-8 T 14-10-2018 IPR025157 Hemagglutinin repeat C3Y93_05090 0f19c782c285b73c9eb100a1b6fdd6e4 2991 Pfam PF13332 Haemagluttinin repeat 2172 2332 3.6E-10 T 14-10-2018 IPR025157 Hemagglutinin repeat C3Y93_05090 0f19c782c285b73c9eb100a1b6fdd6e4 2991 Pfam PF13332 Haemagluttinin repeat 2548 2705 4.0E-12 T 14-10-2018 IPR025157 Hemagglutinin repeat C3Y93_05090 0f19c782c285b73c9eb100a1b6fdd6e4 2991 Pfam PF05860 haemagglutination activity domain 72 201 3.1E-33 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal C3Y93_05090 0f19c782c285b73c9eb100a1b6fdd6e4 2991 SUPERFAMILY SSF51126 75 343 4.71E-54 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor C3Y93_05090 0f19c782c285b73c9eb100a1b6fdd6e4 2991 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 22 2.8E-6 T 14-10-2018 IPR024973 ESPR domain C3Y93_05090 0f19c782c285b73c9eb100a1b6fdd6e4 2991 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 98 199 4.2E-20 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal C3Y93_10680 cd0d498b014a1082adbae5e84f89d40f 449 Pfam PF07690 Major Facilitator Superfamily 29 312 8.6E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_10680 cd0d498b014a1082adbae5e84f89d40f 449 Gene3D G3DSA:1.20.1250.20 21 434 1.6E-73 T 14-10-2018 C3Y93_10680 cd0d498b014a1082adbae5e84f89d40f 449 SUPERFAMILY SSF103473 10 432 8.37E-83 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_10680 cd0d498b014a1082adbae5e84f89d40f 449 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C3Y93_13290 34ce71d6c9386a7f1dd2c524235d626a 944 PIRSF PIRSF000157 4 941 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 C3Y93_13290 34ce71d6c9386a7f1dd2c524235d626a 944 SUPERFAMILY SSF52518 123 551 6.81E-87 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3Y93_13290 34ce71d6c9386a7f1dd2c524235d626a 944 Pfam PF00676 Dehydrogenase E1 component 216 519 9.5E-51 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 C3Y93_13290 34ce71d6c9386a7f1dd2c524235d626a 944 Gene3D G3DSA:3.40.50.12470 560 806 3.1E-165 T 14-10-2018 C3Y93_13290 34ce71d6c9386a7f1dd2c524235d626a 944 Gene3D G3DSA:3.40.50.11610 727 936 3.1E-165 T 14-10-2018 C3Y93_13290 34ce71d6c9386a7f1dd2c524235d626a 944 SUPERFAMILY SSF52518 580 797 5.3E-49 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C3Y93_13290 34ce71d6c9386a7f1dd2c524235d626a 944 Gene3D G3DSA:1.10.287.1150 86 168 2.6E-26 T 14-10-2018 C3Y93_13290 34ce71d6c9386a7f1dd2c524235d626a 944 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 18 54 3.3E-13 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 C3Y93_13290 34ce71d6c9386a7f1dd2c524235d626a 944 SMART SM00861 597 790 3.1E-59 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C3Y93_13290 34ce71d6c9386a7f1dd2c524235d626a 944 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 795 939 7.8E-51 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 C3Y93_13290 34ce71d6c9386a7f1dd2c524235d626a 944 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 18 939 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 C3Y93_13290 34ce71d6c9386a7f1dd2c524235d626a 944 Gene3D G3DSA:3.40.50.970 169 529 4.1E-147 T 14-10-2018 C3Y93_13290 34ce71d6c9386a7f1dd2c524235d626a 944 Pfam PF02779 Transketolase, pyrimidine binding domain 597 791 4.2E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C3Y93_06505 65fdedc7f1873ef7023f4d1eb47e698c 234 SUPERFAMILY SSF53850 19 224 1.13E-64 T 14-10-2018 C3Y93_06505 65fdedc7f1873ef7023f4d1eb47e698c 234 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 160 181 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 C3Y93_06505 65fdedc7f1873ef7023f4d1eb47e698c 234 Gene3D G3DSA:3.40.190.10 112 193 3.1E-70 T 14-10-2018 C3Y93_06505 65fdedc7f1873ef7023f4d1eb47e698c 234 Gene3D G3DSA:3.40.190.10 22 213 3.1E-70 T 14-10-2018 C3Y93_06505 65fdedc7f1873ef7023f4d1eb47e698c 234 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 21 201 3.4E-57 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 C3Y93_06505 65fdedc7f1873ef7023f4d1eb47e698c 234 Pfam PF01634 ATP phosphoribosyltransferase 70 221 2.4E-49 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 C3Y93_06505 65fdedc7f1873ef7023f4d1eb47e698c 234 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 20 225 54.649 T 14-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 C3Y93_04430 cae9ed1e2778761c19c83fdca89735ed 118 Pfam PF04076 Bacterial OB fold (BOF) protein 29 117 8.6E-24 T 14-10-2018 IPR005220 Bacterial OB-fold C3Y93_04430 cae9ed1e2778761c19c83fdca89735ed 118 Gene3D G3DSA:2.40.50.200 12 118 9.2E-30 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily C3Y93_04430 cae9ed1e2778761c19c83fdca89735ed 118 SUPERFAMILY SSF101756 20 117 6.8E-27 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily C3Y93_10930 0893d8dfeacc96ef2cb5b486121e149a 618 Pfam PF02421 Ferrous iron transport protein B 6 165 4.4E-56 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 C3Y93_10930 0893d8dfeacc96ef2cb5b486121e149a 618 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 1.3E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_10930 0893d8dfeacc96ef2cb5b486121e149a 618 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 1.3E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_10930 0893d8dfeacc96ef2cb5b486121e149a 618 Pfam PF07664 Ferrous iron transport protein B C terminus 394 446 3.5E-14 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 C3Y93_10930 0893d8dfeacc96ef2cb5b486121e149a 618 SUPERFAMILY SSF52540 5 168 4.41E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_10930 0893d8dfeacc96ef2cb5b486121e149a 618 Gene3D G3DSA:3.40.50.300 5 189 9.3E-43 T 14-10-2018 C3Y93_10930 0893d8dfeacc96ef2cb5b486121e149a 618 Pfam PF07670 Nucleoside recognition 283 374 2.0E-11 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 C3Y93_10930 0893d8dfeacc96ef2cb5b486121e149a 618 Pfam PF07670 Nucleoside recognition 451 588 4.4E-23 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 C3Y93_08405 b45d7738d2b221e9595e5972c407add3 507 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 12 495 3.1E-230 T 14-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 C3Y93_08405 b45d7738d2b221e9595e5972c407add3 507 SUPERFAMILY SSF100950 228 495 7.23E-82 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C3Y93_08405 b45d7738d2b221e9595e5972c407add3 507 SUPERFAMILY SSF100950 4 218 1.47E-70 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C3Y93_08405 b45d7738d2b221e9595e5972c407add3 507 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 323 464 5.7E-40 T 14-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain C3Y93_08405 b45d7738d2b221e9595e5972c407add3 507 Gene3D G3DSA:3.40.1080.20 337 478 1.2E-37 T 14-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily C3Y93_08405 b45d7738d2b221e9595e5972c407add3 507 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 11 215 3.4E-30 T 14-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 C3Y93_08405 b45d7738d2b221e9595e5972c407add3 507 Gene3D G3DSA:3.40.1080.10 13 185 4.3E-14 T 14-10-2018 C3Y93_08405 b45d7738d2b221e9595e5972c407add3 507 Gene3D G3DSA:3.30.750.70 226 315 9.1E-6 T 14-10-2018 C3Y93_11525 8a45c365e679ac56525df5e75ef699ec 154 Gene3D G3DSA:2.40.128.520 31 154 3.5E-5 T 14-10-2018 C3Y93_11525 8a45c365e679ac56525df5e75ef699ec 154 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 31 137 1.5E-8 T 14-10-2018 IPR019223 Domain of unknown function DUF2147 C3Y93_04245 2619c3ca8bf90e8ec5e5c0d780f669c0 356 Gene3D G3DSA:2.40.30.10 35 135 5.4E-16 T 14-10-2018 C3Y93_04245 2619c3ca8bf90e8ec5e5c0d780f669c0 356 SUPERFAMILY SSF63380 30 136 6.05E-18 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3Y93_04245 2619c3ca8bf90e8ec5e5c0d780f669c0 356 Gene3D G3DSA:3.10.20.30 270 356 2.2E-14 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3Y93_04245 2619c3ca8bf90e8ec5e5c0d780f669c0 356 Pfam PF00175 Oxidoreductase NAD-binding domain 145 247 2.8E-15 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C3Y93_04245 2619c3ca8bf90e8ec5e5c0d780f669c0 356 Pfam PF00970 Oxidoreductase FAD-binding domain 44 134 2.8E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 C3Y93_04245 2619c3ca8bf90e8ec5e5c0d780f669c0 356 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 281 323 8.1E-5 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C3Y93_04245 2619c3ca8bf90e8ec5e5c0d780f669c0 356 PRINTS PR00406 Cytochrome B5 reductase signature 122 136 6.6E-6 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 C3Y93_04245 2619c3ca8bf90e8ec5e5c0d780f669c0 356 PRINTS PR00406 Cytochrome B5 reductase signature 233 241 6.6E-6 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 C3Y93_04245 2619c3ca8bf90e8ec5e5c0d780f669c0 356 PRINTS PR00406 Cytochrome B5 reductase signature 144 163 6.6E-6 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 C3Y93_04245 2619c3ca8bf90e8ec5e5c0d780f669c0 356 SUPERFAMILY SSF52343 123 253 4.19E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_04245 2619c3ca8bf90e8ec5e5c0d780f669c0 356 SUPERFAMILY SSF54292 255 356 1.57E-16 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3Y93_04245 2619c3ca8bf90e8ec5e5c0d780f669c0 356 Gene3D G3DSA:3.40.50.80 136 266 5.2E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_02085 1b4bd70ce13f8ec67d19da8e31829288 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 2.4E-53 T 14-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 C3Y93_02085 1b4bd70ce13f8ec67d19da8e31829288 112 PRINTS PR00355 Adrenodoxin signature 42 52 6.3E-9 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 C3Y93_02085 1b4bd70ce13f8ec67d19da8e31829288 112 PRINTS PR00355 Adrenodoxin signature 60 74 6.3E-9 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 C3Y93_02085 1b4bd70ce13f8ec67d19da8e31829288 112 PRINTS PR00355 Adrenodoxin signature 83 91 6.3E-9 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 C3Y93_02085 1b4bd70ce13f8ec67d19da8e31829288 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 C3Y93_02085 1b4bd70ce13f8ec67d19da8e31829288 112 Gene3D G3DSA:3.10.20.30 1 112 1.2E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3Y93_02085 1b4bd70ce13f8ec67d19da8e31829288 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 3.3E-11 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C3Y93_02085 1b4bd70ce13f8ec67d19da8e31829288 112 SUPERFAMILY SSF54292 6 108 5.13E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3Y93_09760 476feb504a5af127500b33e2d976c2b8 382 PIRSF PIRSF000804 1 382 5.3E-106 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 C3Y93_09760 476feb504a5af127500b33e2d976c2b8 382 SUPERFAMILY SSF55979 261 382 3.59E-34 T 14-10-2018 C3Y93_09760 476feb504a5af127500b33e2d976c2b8 382 Gene3D G3DSA:3.10.150.10 1 125 4.8E-35 T 14-10-2018 C3Y93_09760 476feb504a5af127500b33e2d976c2b8 382 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 2 381 1.2E-92 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 C3Y93_09760 476feb504a5af127500b33e2d976c2b8 382 SUPERFAMILY SSF55979 3 120 5.24E-24 T 14-10-2018 C3Y93_09760 476feb504a5af127500b33e2d976c2b8 382 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 3 122 3.0E-32 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 C3Y93_09760 476feb504a5af127500b33e2d976c2b8 382 SMART SM00480 17 378 5.2E-118 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 C3Y93_09760 476feb504a5af127500b33e2d976c2b8 382 Gene3D G3DSA:3.10.150.10 264 382 2.3E-35 T 14-10-2018 C3Y93_09760 476feb504a5af127500b33e2d976c2b8 382 SUPERFAMILY SSF55979 131 260 1.74E-20 T 14-10-2018 C3Y93_09760 476feb504a5af127500b33e2d976c2b8 382 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 261 381 1.6E-34 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 C3Y93_09760 476feb504a5af127500b33e2d976c2b8 382 Pfam PF02767 DNA polymerase III beta subunit, central domain 134 259 1.4E-29 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 C3Y93_09760 476feb504a5af127500b33e2d976c2b8 382 Gene3D G3DSA:3.10.150.10 129 263 3.1E-31 T 14-10-2018 C3Y93_03435 ac32068b9afe948a42757f37591dc3a4 413 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 364 383 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 C3Y93_03435 ac32068b9afe948a42757f37591dc3a4 413 SUPERFAMILY SSF56645 21 257 1.44E-77 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3Y93_03435 ac32068b9afe948a42757f37591dc3a4 413 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 34 146 9.6E-35 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3Y93_03435 ac32068b9afe948a42757f37591dc3a4 413 Gene3D G3DSA:2.40.110.10 149 258 3.6E-36 T 14-10-2018 C3Y93_03435 ac32068b9afe948a42757f37591dc3a4 413 Gene3D G3DSA:1.10.540.10 16 148 3.6E-42 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3Y93_03435 ac32068b9afe948a42757f37591dc3a4 413 SUPERFAMILY SSF47203 258 407 1.32E-40 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3Y93_03435 ac32068b9afe948a42757f37591dc3a4 413 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 259 404 3.6E-27 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3Y93_03435 ac32068b9afe948a42757f37591dc3a4 413 Gene3D G3DSA:1.20.140.10 260 413 3.6E-39 T 14-10-2018 C3Y93_03435 ac32068b9afe948a42757f37591dc3a4 413 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 150 246 5.7E-19 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3Y93_04000 9440bc61857fd4375b93ebda95dd1144 419 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 25 419 6.5E-38 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) C3Y93_04000 9440bc61857fd4375b93ebda95dd1144 419 SUPERFAMILY SSF56935 26 419 2.32E-62 T 14-10-2018 C3Y93_04000 9440bc61857fd4375b93ebda95dd1144 419 Gene3D G3DSA:2.40.160.60 24 419 4.5E-92 T 14-10-2018 C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 637 31.311 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 SMART SM00387 28 185 5.0E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 Gene3D G3DSA:3.40.50.11260 415 502 1.0E-31 T 14-10-2018 C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 Pfam PF00183 Hsp90 protein 220 636 2.7E-126 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 Gene3D G3DSA:1.20.120.790 508 638 1.4E-40 T 14-10-2018 IPR037196 HSP90, C-terminal domain C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 SUPERFAMILY SSF54211 244 501 1.29E-94 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 183 1.8E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 SUPERFAMILY SSF110942 528 637 1.31E-33 T 14-10-2018 IPR037196 HSP90, C-terminal domain C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 PIRSF PIRSF002583 1 638 6.2E-214 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 PRINTS PR00775 90kDa heat shock protein signature 76 93 4.6E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 PRINTS PR00775 90kDa heat shock protein signature 173 190 4.6E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 PRINTS PR00775 90kDa heat shock protein signature 191 209 4.6E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 PRINTS PR00775 90kDa heat shock protein signature 6 26 4.6E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 PRINTS PR00775 90kDa heat shock protein signature 121 143 4.6E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 PRINTS PR00775 90kDa heat shock protein signature 27 49 4.6E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 PRINTS PR00775 90kDa heat shock protein signature 94 111 4.6E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 SUPERFAMILY SSF55874 5 216 7.25E-66 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 Gene3D G3DSA:3.30.565.10 1 228 5.0E-78 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_11185 1ec9c7a7c899d11816f8c8345a64c4fd 638 Gene3D G3DSA:3.30.230.80 243 414 5.0E-67 T 14-10-2018 C3Y93_03635 564749f223ee96f800e3e645505c371e 148 PIRSF PIRSF006276 1 148 7.1E-21 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_03635 564749f223ee96f800e3e645505c371e 148 Pfam PF00582 Universal stress protein family 4 147 1.1E-33 T 14-10-2018 IPR006016 UspA C3Y93_03635 564749f223ee96f800e3e645505c371e 148 PRINTS PR01438 Universal stress protein signature 4 22 2.3E-20 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_03635 564749f223ee96f800e3e645505c371e 148 PRINTS PR01438 Universal stress protein signature 107 119 2.3E-20 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_03635 564749f223ee96f800e3e645505c371e 148 PRINTS PR01438 Universal stress protein signature 125 147 2.3E-20 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_03635 564749f223ee96f800e3e645505c371e 148 SUPERFAMILY SSF52402 3 147 5.11E-38 T 14-10-2018 C3Y93_03635 564749f223ee96f800e3e645505c371e 148 Gene3D G3DSA:3.40.50.620 2 147 1.4E-38 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_07885 df44ad96455d6f41da25c0183a7f4278 211 Pfam PF05494 MlaC protein 35 198 1.2E-36 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC C3Y93_07885 df44ad96455d6f41da25c0183a7f4278 211 PIRSF PIRSF004649 1 211 4.2E-55 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC C3Y93_07885 df44ad96455d6f41da25c0183a7f4278 211 Gene3D G3DSA:3.10.450.710 27 207 4.8E-46 T 14-10-2018 C3Y93_04990 bcfd24cfc9fcb329cb5b91c321e6b561 337 SUPERFAMILY SSF102114 48 313 7.19E-65 T 14-10-2018 C3Y93_04990 bcfd24cfc9fcb329cb5b91c321e6b561 337 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 33 70 3.0E-7 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3Y93_04990 bcfd24cfc9fcb329cb5b91c321e6b561 337 Hamap MF_00206 Lipoyl synthase [lipA]. 1 322 147.673 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3Y93_04990 bcfd24cfc9fcb329cb5b91c321e6b561 337 Gene3D G3DSA:3.20.20.70 81 282 2.2E-22 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_04990 bcfd24cfc9fcb329cb5b91c321e6b561 337 TIGRFAM TIGR00510 lipA: lipoyl synthase 31 310 8.6E-122 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3Y93_04990 bcfd24cfc9fcb329cb5b91c321e6b561 337 SMART SM00729 81 287 1.2E-19 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3Y93_04990 bcfd24cfc9fcb329cb5b91c321e6b561 337 Pfam PF04055 Radical SAM superfamily 88 249 5.0E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3Y93_04990 bcfd24cfc9fcb329cb5b91c321e6b561 337 PIRSF PIRSF005963 2 334 2.7E-127 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C3Y93_06295 da9e30721cd757cb2060f5ebc2e38e72 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 34 202 4.2E-62 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 C3Y93_06295 da9e30721cd757cb2060f5ebc2e38e72 243 SUPERFAMILY SSF55729 4 227 4.45E-80 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3Y93_06295 da9e30721cd757cb2060f5ebc2e38e72 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 215 1.0E-56 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 C3Y93_06295 da9e30721cd757cb2060f5ebc2e38e72 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 78.893 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 C3Y93_06295 da9e30721cd757cb2060f5ebc2e38e72 243 Gene3D G3DSA:3.40.630.70 60 238 2.9E-57 T 14-10-2018 C3Y93_06295 da9e30721cd757cb2060f5ebc2e38e72 243 Gene3D G3DSA:2.30.210.20 1 59 6.9E-21 T 14-10-2018 C3Y93_09135 d0bded39896a4d891a9d217760140cdd 99 SMART SM00418 5 93 4.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3Y93_09135 d0bded39896a4d891a9d217760140cdd 99 Gene3D G3DSA:1.10.10.10 1 99 2.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_09135 d0bded39896a4d891a9d217760140cdd 99 SUPERFAMILY SSF46785 3 95 2.56E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_09135 d0bded39896a4d891a9d217760140cdd 99 Pfam PF12840 Helix-turn-helix domain 4 74 8.5E-16 T 14-10-2018 C3Y93_11320 36ca2b2b86ca59ce3f00c6c2685ebab8 249 SMART SM00967 6 82 3.0E-16 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 C3Y93_11320 36ca2b2b86ca59ce3f00c6c2685ebab8 249 SUPERFAMILY SSF75217 70 248 3.99E-45 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3Y93_11320 36ca2b2b86ca59ce3f00c6c2685ebab8 249 Gene3D G3DSA:3.40.1280.10 81 248 2.2E-52 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3Y93_11320 36ca2b2b86ca59ce3f00c6c2685ebab8 249 Gene3D G3DSA:3.30.1330.30 1 78 8.4E-24 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like C3Y93_11320 36ca2b2b86ca59ce3f00c6c2685ebab8 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 247 2.6E-65 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 C3Y93_11320 36ca2b2b86ca59ce3f00c6c2685ebab8 249 Pfam PF00588 SpoU rRNA Methylase family 98 241 6.3E-37 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 C3Y93_11320 36ca2b2b86ca59ce3f00c6c2685ebab8 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 80 1.4E-17 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 C3Y93_11320 36ca2b2b86ca59ce3f00c6c2685ebab8 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 248 38.532 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB C3Y93_11320 36ca2b2b86ca59ce3f00c6c2685ebab8 249 SUPERFAMILY SSF55315 3 78 6.59E-17 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like C3Y93_02020 90e119a44d7d11beb8e178b442771aea 285 Gene3D G3DSA:3.30.540.10 11 153 1.3E-28 T 14-10-2018 C3Y93_02020 90e119a44d7d11beb8e178b442771aea 285 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 12 267 32.514 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 C3Y93_02020 90e119a44d7d11beb8e178b442771aea 285 Pfam PF00459 Inositol monophosphatase family 20 260 1.8E-34 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3Y93_02020 90e119a44d7d11beb8e178b442771aea 285 Gene3D G3DSA:3.40.190.80 163 269 2.5E-24 T 14-10-2018 C3Y93_02020 90e119a44d7d11beb8e178b442771aea 285 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 91 104 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site C3Y93_02020 90e119a44d7d11beb8e178b442771aea 285 SUPERFAMILY SSF56655 14 278 9.42E-51 T 14-10-2018 C3Y93_07710 10f5e27025b025782b9c0cbeeda81a44 116 Gene3D G3DSA:3.30.420.100 2 116 2.0E-40 T 14-10-2018 C3Y93_07710 10f5e27025b025782b9c0cbeeda81a44 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 116 6.6E-41 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07710 10f5e27025b025782b9c0cbeeda81a44 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 116 25.939 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07710 10f5e27025b025782b9c0cbeeda81a44 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 116 3.7E-39 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07710 10f5e27025b025782b9c0cbeeda81a44 116 SUPERFAMILY SSF53137 4 114 2.83E-50 T 14-10-2018 C3Y93_05980 3818514956dbd587d10694429bc3c603 243 PIRSF PIRSF000857 6 243 8.2E-78 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 C3Y93_05980 3818514956dbd587d10694429bc3c603 243 SUPERFAMILY SSF52402 13 201 2.64E-47 T 14-10-2018 C3Y93_05980 3818514956dbd587d10694429bc3c603 243 Gene3D G3DSA:3.40.50.620 9 228 4.1E-67 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_05980 3818514956dbd587d10694429bc3c603 243 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 36 213 9.6E-47 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 C3Y93_05980 3818514956dbd587d10694429bc3c603 243 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 42 237 3.2E-76 T 14-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 C3Y93_05840 52aa8f7c763d9ea6d8ac5455eb07b7d9 253 SUPERFAMILY SSF52343 107 251 1.83E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_05840 52aa8f7c763d9ea6d8ac5455eb07b7d9 253 Pfam PF00970 Oxidoreductase FAD-binding domain 18 94 1.0E-8 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 C3Y93_05840 52aa8f7c763d9ea6d8ac5455eb07b7d9 253 SUPERFAMILY SSF63380 6 101 1.24E-24 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3Y93_05840 52aa8f7c763d9ea6d8ac5455eb07b7d9 253 Gene3D G3DSA:2.40.30.10 1 97 1.8E-29 T 14-10-2018 C3Y93_05840 52aa8f7c763d9ea6d8ac5455eb07b7d9 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 3.4E-7 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_05840 52aa8f7c763d9ea6d8ac5455eb07b7d9 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 115 134 3.4E-7 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_05840 52aa8f7c763d9ea6d8ac5455eb07b7d9 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 140 149 3.4E-7 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_05840 52aa8f7c763d9ea6d8ac5455eb07b7d9 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 34 46 3.4E-7 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_05840 52aa8f7c763d9ea6d8ac5455eb07b7d9 253 Gene3D G3DSA:3.40.50.80 99 253 6.0E-39 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_05840 52aa8f7c763d9ea6d8ac5455eb07b7d9 253 Pfam PF00175 Oxidoreductase NAD-binding domain 116 229 1.6E-13 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C3Y93_05840 52aa8f7c763d9ea6d8ac5455eb07b7d9 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 115 134 3.2E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3Y93_05840 52aa8f7c763d9ea6d8ac5455eb07b7d9 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 3.2E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3Y93_05840 52aa8f7c763d9ea6d8ac5455eb07b7d9 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 53 60 3.2E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3Y93_12835 62d543bc24634fd1cce57a193a24a39b 264 Pfam PF02616 Segregation and condensation protein ScpA 53 142 6.5E-14 T 14-10-2018 IPR003768 Segregation and condensation protein A C3Y93_10560 16273422905b1e7d55eed842dcb55178 291 ProSitePatterns PS00449 ATP synthase a subunit signature. 227 236 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10560 16273422905b1e7d55eed842dcb55178 291 SUPERFAMILY SSF81336 103 285 3.4E-42 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10560 16273422905b1e7d55eed842dcb55178 291 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 291 15.812 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10560 16273422905b1e7d55eed842dcb55178 291 Pfam PF00119 ATP synthase A chain 55 285 3.4E-56 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10560 16273422905b1e7d55eed842dcb55178 291 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 45 286 1.2E-41 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_10560 16273422905b1e7d55eed842dcb55178 291 Gene3D G3DSA:1.20.120.220 102 291 6.1E-59 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C3Y93_13765 6a1f1457f6459b9ee849b4254b09afa3 414 SUPERFAMILY SSF47090 143 191 3.61E-11 T 14-10-2018 IPR036365 PGBD-like superfamily C3Y93_13765 6a1f1457f6459b9ee849b4254b09afa3 414 Pfam PF01471 Putative peptidoglycan binding domain 150 190 2.1E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like C3Y93_13765 6a1f1457f6459b9ee849b4254b09afa3 414 Pfam PF03734 L,D-transpeptidase catalytic domain 282 409 2.6E-18 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 C3Y93_13765 6a1f1457f6459b9ee849b4254b09afa3 414 Gene3D G3DSA:2.40.440.10 223 414 1.2E-43 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like C3Y93_13765 6a1f1457f6459b9ee849b4254b09afa3 414 SUPERFAMILY SSF141523 282 410 2.09E-27 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like C3Y93_13765 6a1f1457f6459b9ee849b4254b09afa3 414 Gene3D G3DSA:1.10.101.10 139 199 9.8E-10 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 C3Y93_10250 3c74d01425e0fee5b2d72fdea2af5839 218 Gene3D G3DSA:2.160.10.10 94 208 4.6E-32 T 14-10-2018 C3Y93_10250 3c74d01425e0fee5b2d72fdea2af5839 218 SUPERFAMILY SSF51161 8 216 1.16E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3Y93_10250 3c74d01425e0fee5b2d72fdea2af5839 218 Gene3D G3DSA:3.40.50.20 1 91 3.3E-17 T 14-10-2018 C3Y93_10250 3c74d01425e0fee5b2d72fdea2af5839 218 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 6 213 3.4E-48 T 14-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like C3Y93_04530 50e879b7aea8186be98eb72e0954357a 417 Gene3D G3DSA:3.40.640.10 36 288 2.4E-186 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_04530 50e879b7aea8186be98eb72e0954357a 417 Gene3D G3DSA:3.90.1150.10 9 393 2.4E-186 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_04530 50e879b7aea8186be98eb72e0954357a 417 Pfam PF00464 Serine hydroxymethyltransferase 8 385 1.6E-181 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 C3Y93_04530 50e879b7aea8186be98eb72e0954357a 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 6 416 53.107 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 C3Y93_04530 50e879b7aea8186be98eb72e0954357a 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 C3Y93_04530 50e879b7aea8186be98eb72e0954357a 417 SUPERFAMILY SSF53383 4 415 4.95E-183 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_04530 50e879b7aea8186be98eb72e0954357a 417 PIRSF PIRSF000412 2 417 2.0E-169 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 C3Y93_01675 c6b75cdab7bea21de017cc97113edd2b 337 SUPERFAMILY SSF52540 51 168 4.89E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01675 c6b75cdab7bea21de017cc97113edd2b 337 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 24 319 4.2E-69 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 C3Y93_01675 c6b75cdab7bea21de017cc97113edd2b 337 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 6 334 34.535 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 C3Y93_01675 c6b75cdab7bea21de017cc97113edd2b 337 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 326 5.4E-97 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 C3Y93_08395 e9943ae21f72ac9c688044239023b31a 254 SMART SM00448 21 132 2.2E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_08395 e9943ae21f72ac9c688044239023b31a 254 Gene3D G3DSA:1.10.10.10 146 254 6.6E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_08395 e9943ae21f72ac9c688044239023b31a 254 SUPERFAMILY SSF52172 22 143 6.26E-42 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_08395 e9943ae21f72ac9c688044239023b31a 254 Pfam PF00072 Response regulator receiver domain 23 133 1.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_08395 e9943ae21f72ac9c688044239023b31a 254 SUPERFAMILY SSF46894 154 250 1.76E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3Y93_08395 e9943ae21f72ac9c688044239023b31a 254 Pfam PF00486 Transcriptional regulatory protein, C terminal 172 248 1.3E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_08395 e9943ae21f72ac9c688044239023b31a 254 SMART SM00862 172 248 7.8E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_08395 e9943ae21f72ac9c688044239023b31a 254 Gene3D G3DSA:3.40.50.2300 7 141 1.6E-40 T 14-10-2018 C3Y93_05580 e4bf79dd74d9a7a0173a93019d6522f6 408 PIRSF PIRSF004810 1 408 3.4E-98 T 14-10-2018 IPR014047 Chromate transporter, long chain C3Y93_05580 e4bf79dd74d9a7a0173a93019d6522f6 408 Pfam PF02417 Chromate transporter 9 172 1.2E-33 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 C3Y93_05580 e4bf79dd74d9a7a0173a93019d6522f6 408 Pfam PF02417 Chromate transporter 239 397 2.6E-31 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 C3Y93_05580 e4bf79dd74d9a7a0173a93019d6522f6 408 TIGRFAM TIGR00937 2A51: chromate efflux transporter 13 398 4.0E-80 T 14-10-2018 IPR014047 Chromate transporter, long chain C3Y93_10230 4e4b67bc0310010bedd35cdcc6c68379 363 SUPERFAMILY SSF53756 3 360 2.22E-86 T 14-10-2018 C3Y93_10230 4e4b67bc0310010bedd35cdcc6c68379 363 Gene3D G3DSA:3.40.50.2000 164 346 1.5E-79 T 14-10-2018 C3Y93_10230 4e4b67bc0310010bedd35cdcc6c68379 363 Gene3D G3DSA:3.40.50.2000 21 359 1.5E-79 T 14-10-2018 C3Y93_10230 4e4b67bc0310010bedd35cdcc6c68379 363 Pfam PF00534 Glycosyl transferases group 1 181 339 7.3E-39 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3Y93_10230 4e4b67bc0310010bedd35cdcc6c68379 363 Pfam PF13439 Glycosyltransferase Family 4 12 167 1.0E-18 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3Y93_04325 6c4680db097c9ab45ec08fe0967ee79f 261 SUPERFAMILY SSF55120 3 189 4.48E-35 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_04325 6c4680db097c9ab45ec08fe0967ee79f 261 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 38 52 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 C3Y93_04325 6c4680db097c9ab45ec08fe0967ee79f 261 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 7 180 1.3E-46 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 C3Y93_04325 6c4680db097c9ab45ec08fe0967ee79f 261 Pfam PF00849 RNA pseudouridylate synthase 3 148 2.9E-11 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_04325 6c4680db097c9ab45ec08fe0967ee79f 261 Gene3D G3DSA:3.30.70.580 1 66 4.2E-17 T 14-10-2018 C3Y93_04325 6c4680db097c9ab45ec08fe0967ee79f 261 Gene3D G3DSA:3.30.70.1560 67 167 2.2E-39 T 14-10-2018 C3Y93_13805 4a14aba06b598b85f3a73d2e1cecca39 268 Gene3D G3DSA:3.20.20.70 2 267 4.8E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_13805 4a14aba06b598b85f3a73d2e1cecca39 268 Pfam PF00218 Indole-3-glycerol phosphate synthase 9 260 1.8E-97 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 C3Y93_13805 4a14aba06b598b85f3a73d2e1cecca39 268 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 C3Y93_13805 4a14aba06b598b85f3a73d2e1cecca39 268 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 7 263 35.294 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 C3Y93_13805 4a14aba06b598b85f3a73d2e1cecca39 268 SUPERFAMILY SSF51366 16 263 1.65E-86 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3Y93_11680 f277d17ea22f31b8a71696d1fbf379ff 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 550 2.7E-201 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11680 f277d17ea22f31b8a71696d1fbf379ff 689 Pfam PF05746 DALR anticodon binding domain 582 678 2.9E-9 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 C3Y93_11680 f277d17ea22f31b8a71696d1fbf379ff 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 687 24.959 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11680 f277d17ea22f31b8a71696d1fbf379ff 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.9E-32 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11680 f277d17ea22f31b8a71696d1fbf379ff 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 7.9E-32 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11680 f277d17ea22f31b8a71696d1fbf379ff 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 7.9E-32 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11680 f277d17ea22f31b8a71696d1fbf379ff 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.9E-32 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11680 f277d17ea22f31b8a71696d1fbf379ff 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 7.9E-32 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11680 f277d17ea22f31b8a71696d1fbf379ff 689 SUPERFAMILY SSF109604 337 505 8.64E-18 T 14-10-2018 C3Y93_11680 f277d17ea22f31b8a71696d1fbf379ff 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 688 3.9E-235 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_13590 178b4a1ebfc139968127314b33a7bfbe 249 Gene3D G3DSA:3.40.50.300 13 247 2.8E-67 T 14-10-2018 C3Y93_13590 178b4a1ebfc139968127314b33a7bfbe 249 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_13590 178b4a1ebfc139968127314b33a7bfbe 249 SUPERFAMILY SSF52540 15 238 1.77E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_13590 178b4a1ebfc139968127314b33a7bfbe 249 SMART SM00382 44 231 4.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_13590 178b4a1ebfc139968127314b33a7bfbe 249 Pfam PF00005 ABC transporter 36 184 3.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_10155 7ec1fdb279d842610eab82d025a5a1ff 386 Gene3D G3DSA:3.30.1950.10 108 185 1.7E-72 T 14-10-2018 C3Y93_10155 7ec1fdb279d842610eab82d025a5a1ff 386 Gene3D G3DSA:3.10.560.10 272 356 1.7E-72 T 14-10-2018 C3Y93_10155 7ec1fdb279d842610eab82d025a5a1ff 386 Gene3D G3DSA:3.10.560.10 90 271 1.7E-72 T 14-10-2018 C3Y93_10155 7ec1fdb279d842610eab82d025a5a1ff 386 Pfam PF02563 Polysaccharide biosynthesis/export protein 102 181 6.6E-20 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 C3Y93_03945 e2f4c6c63a4a52b7cbcc2d067267f948 1187 SUPERFAMILY SSF89550 3 254 1.14E-11 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 C3Y93_03945 e2f4c6c63a4a52b7cbcc2d067267f948 1187 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 283 725 8.2E-166 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_03945 e2f4c6c63a4a52b7cbcc2d067267f948 1187 Gene3D G3DSA:3.20.20.140 1 261 1.4E-77 T 14-10-2018 C3Y93_03945 e2f4c6c63a4a52b7cbcc2d067267f948 1187 Pfam PF14579 Helix-hairpin-helix motif 800 888 3.6E-27 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_03945 e2f4c6c63a4a52b7cbcc2d067267f948 1187 Pfam PF02811 PHP domain 5 163 8.6E-27 T 14-10-2018 IPR004013 PHP domain GO:0003824 C3Y93_03945 e2f4c6c63a4a52b7cbcc2d067267f948 1187 Gene3D G3DSA:1.10.10.1600 428 511 9.1E-25 T 14-10-2018 C3Y93_03945 e2f4c6c63a4a52b7cbcc2d067267f948 1187 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 991 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_03945 e2f4c6c63a4a52b7cbcc2d067267f948 1187 SMART SM00481 4 71 3.2E-12 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal C3Y93_02405 d9d96bf6b5262cd11b320df0e85e864b 431 Pfam PF13438 Domain of unknown function (DUF4113) 379 420 6.8E-8 T 14-10-2018 IPR025188 Domain of unknown function DUF4113 C3Y93_02405 d9d96bf6b5262cd11b320df0e85e864b 431 Gene3D G3DSA:2.30.40.20 16 79 1.1E-40 T 14-10-2018 C3Y93_02405 d9d96bf6b5262cd11b320df0e85e864b 431 Pfam PF00817 impB/mucB/samB family 11 157 2.7E-31 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3Y93_02405 d9d96bf6b5262cd11b320df0e85e864b 431 SUPERFAMILY SSF56672 7 245 5.07E-59 T 14-10-2018 C3Y93_02405 d9d96bf6b5262cd11b320df0e85e864b 431 Pfam PF11799 impB/mucB/samB family C-terminal domain 252 361 2.9E-9 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3Y93_02405 d9d96bf6b5262cd11b320df0e85e864b 431 Gene3D G3DSA:3.30.70.270 10 164 1.1E-40 T 14-10-2018 C3Y93_02405 d9d96bf6b5262cd11b320df0e85e864b 431 Gene3D G3DSA:1.10.150.20 187 235 2.7E-8 T 14-10-2018 C3Y93_10825 b5b94273f42c6ccffef7d575c44f69b1 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 16 357 1.0E-117 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 C3Y93_10825 b5b94273f42c6ccffef7d575c44f69b1 367 SUPERFAMILY SSF53927 12 153 1.29E-46 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 C3Y93_10825 b5b94273f42c6ccffef7d575c44f69b1 367 SUPERFAMILY SSF53597 153 358 1.69E-51 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 C3Y93_10825 b5b94273f42c6ccffef7d575c44f69b1 367 Gene3D G3DSA:3.40.140.10 2 149 1.8E-47 T 14-10-2018 C3Y93_10825 b5b94273f42c6ccffef7d575c44f69b1 367 PIRSF PIRSF006769 7 365 9.1E-123 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 C3Y93_10825 b5b94273f42c6ccffef7d575c44f69b1 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 15 108 7.0E-20 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain C3Y93_10825 b5b94273f42c6ccffef7d575c44f69b1 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 155 359 2.8E-51 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 C3Y93_10825 b5b94273f42c6ccffef7d575c44f69b1 367 Gene3D G3DSA:3.40.430.10 150 367 2.5E-70 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 C3Y93_10825 b5b94273f42c6ccffef7d575c44f69b1 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 97 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 C3Y93_10825 b5b94273f42c6ccffef7d575c44f69b1 367 Pfam PF01872 RibD C-terminal domain 156 356 9.6E-42 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 C3Y93_10820 b29b92159d59ef7616fd1575936f759b 152 Pfam PF03477 ATP cone domain 50 136 4.1E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 C3Y93_10820 b29b92159d59ef7616fd1575936f759b 152 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 1.6E-59 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 C3Y93_10820 b29b92159d59ef7616fd1575936f759b 152 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 152 80.447 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 C3Y93_12305 05ba12731fb5181c1da1ccaa0750cee7 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 72 92 1.8E-31 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C3Y93_12305 05ba12731fb5181c1da1ccaa0750cee7 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 1.8E-31 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C3Y93_12305 05ba12731fb5181c1da1ccaa0750cee7 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 122 140 1.8E-31 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C3Y93_12305 05ba12731fb5181c1da1ccaa0750cee7 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 96 118 1.8E-31 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C3Y93_12305 05ba12731fb5181c1da1ccaa0750cee7 152 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 6 141 1.8E-45 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C3Y93_12305 05ba12731fb5181c1da1ccaa0750cee7 152 Hamap MF_00821 Protein-export protein SecB [secB]. 1 144 30.806 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C3Y93_12305 05ba12731fb5181c1da1ccaa0750cee7 152 Gene3D G3DSA:3.10.420.10 1 152 2.9E-51 T 14-10-2018 IPR035958 SecB-like superfamily C3Y93_12305 05ba12731fb5181c1da1ccaa0750cee7 152 SUPERFAMILY SSF54611 2 141 4.8E-46 T 14-10-2018 IPR035958 SecB-like superfamily C3Y93_12305 05ba12731fb5181c1da1ccaa0750cee7 152 Pfam PF02556 Preprotein translocase subunit SecB 4 142 7.4E-50 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C3Y93_10095 ecec139f1b75e3a2e6196266064e198f 309 SUPERFAMILY SSF53448 1 248 4.97E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_10095 ecec139f1b75e3a2e6196266064e198f 309 Gene3D G3DSA:3.90.550.10 1 198 1.3E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_10095 ecec139f1b75e3a2e6196266064e198f 309 Pfam PF00535 Glycosyl transferase family 2 4 166 1.4E-29 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C3Y93_09970 01df7da5f6fdd7ee6d00d485dce7b4d8 435 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 430 9.5E-52 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 C3Y93_09970 01df7da5f6fdd7ee6d00d485dce7b4d8 435 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 18 434 1.4E-104 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 C3Y93_09970 01df7da5f6fdd7ee6d00d485dce7b4d8 435 Pfam PF01029 NusB family 13 130 2.3E-16 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 C3Y93_09970 01df7da5f6fdd7ee6d00d485dce7b4d8 435 SUPERFAMILY SSF48013 12 149 1.55E-25 T 14-10-2018 IPR035926 NusB-like superfamily C3Y93_09970 01df7da5f6fdd7ee6d00d485dce7b4d8 435 SUPERFAMILY SSF53335 140 433 1.21E-65 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_09970 01df7da5f6fdd7ee6d00d485dce7b4d8 435 Gene3D G3DSA:3.40.50.150 142 433 2.9E-72 T 14-10-2018 C3Y93_09970 01df7da5f6fdd7ee6d00d485dce7b4d8 435 Gene3D G3DSA:1.10.940.10 8 141 1.7E-32 T 14-10-2018 IPR035926 NusB-like superfamily C3Y93_09970 01df7da5f6fdd7ee6d00d485dce7b4d8 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 1.5E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3Y93_09970 01df7da5f6fdd7ee6d00d485dce7b4d8 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 1.5E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3Y93_09970 01df7da5f6fdd7ee6d00d485dce7b4d8 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 318 330 1.5E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3Y93_09970 01df7da5f6fdd7ee6d00d485dce7b4d8 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 368 384 1.5E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3Y93_09970 01df7da5f6fdd7ee6d00d485dce7b4d8 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 416 433 1.5E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C3Y93_03630 f7dd95e554240195a1ca19cc8ca9b896 149 SUPERFAMILY SSF52402 3 148 6.11E-39 T 14-10-2018 C3Y93_03630 f7dd95e554240195a1ca19cc8ca9b896 149 Gene3D G3DSA:3.40.50.620 1 149 1.4E-38 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_03630 f7dd95e554240195a1ca19cc8ca9b896 149 Pfam PF00582 Universal stress protein family 3 148 6.8E-30 T 14-10-2018 IPR006016 UspA C3Y93_03630 f7dd95e554240195a1ca19cc8ca9b896 149 PRINTS PR01438 Universal stress protein signature 3 21 2.1E-20 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_03630 f7dd95e554240195a1ca19cc8ca9b896 149 PRINTS PR01438 Universal stress protein signature 126 148 2.1E-20 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_03630 f7dd95e554240195a1ca19cc8ca9b896 149 PRINTS PR01438 Universal stress protein signature 108 120 2.1E-20 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_03630 f7dd95e554240195a1ca19cc8ca9b896 149 PIRSF PIRSF006276 1 149 4.2E-22 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_04360 f902cf1d583e8b33e95cd348814cad5e 748 Gene3D G3DSA:3.65.10.10 318 734 6.9E-169 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 C3Y93_04360 f902cf1d583e8b33e95cd348814cad5e 748 ProSitePatterns PS00104 EPSP synthase signature 1. 393 407 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 C3Y93_04360 f902cf1d583e8b33e95cd348814cad5e 748 SUPERFAMILY SSF55205 309 736 1.96E-131 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 C3Y93_04360 f902cf1d583e8b33e95cd348814cad5e 748 SUPERFAMILY SSF48179 181 288 3.74E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3Y93_04360 f902cf1d583e8b33e95cd348814cad5e 748 Pfam PF02153 Prephenate dehydrogenase 27 278 2.4E-70 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 C3Y93_04360 f902cf1d583e8b33e95cd348814cad5e 748 Gene3D G3DSA:3.65.10.10 326 536 6.9E-169 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 C3Y93_04360 f902cf1d583e8b33e95cd348814cad5e 748 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 314 743 33.245 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 C3Y93_04360 f902cf1d583e8b33e95cd348814cad5e 748 ProSitePatterns PS00885 EPSP synthase signature 2. 647 665 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 C3Y93_04360 f902cf1d583e8b33e95cd348814cad5e 748 Gene3D G3DSA:1.10.3660.10 184 288 8.1E-35 T 14-10-2018 C3Y93_04360 f902cf1d583e8b33e95cd348814cad5e 748 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 318 736 9.3E-130 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 C3Y93_04360 f902cf1d583e8b33e95cd348814cad5e 748 Gene3D G3DSA:3.40.50.720 6 183 1.7E-51 T 14-10-2018 C3Y93_04360 f902cf1d583e8b33e95cd348814cad5e 748 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 314 735 2.1E-119 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 C3Y93_04360 f902cf1d583e8b33e95cd348814cad5e 748 SUPERFAMILY SSF51735 8 176 1.01E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_01465 0b3e270ca7717b69e82a15fd7d36c186 366 SUPERFAMILY SSF54862 189 296 1.84E-15 T 14-10-2018 C3Y93_01465 0b3e270ca7717b69e82a15fd7d36c186 366 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 17 325 45.876 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 C3Y93_01465 0b3e270ca7717b69e82a15fd7d36c186 366 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 203 214 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3Y93_01465 0b3e270ca7717b69e82a15fd7d36c186 366 Pfam PF13484 4Fe-4S double cluster binding domain 202 266 5.3E-20 T 14-10-2018 C3Y93_01465 0b3e270ca7717b69e82a15fd7d36c186 366 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 24 358 7.5E-141 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 C3Y93_01465 0b3e270ca7717b69e82a15fd7d36c186 366 Pfam PF08331 Domain of unknown function (DUF1730) 72 150 2.1E-23 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 C3Y93_05915 fe47f780f2b447669adcc45527772e17 595 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 101 155 2.0E-25 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05915 fe47f780f2b447669adcc45527772e17 595 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 207 595 40.994 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05915 fe47f780f2b447669adcc45527772e17 595 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 325 595 1.1E-99 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05915 fe47f780f2b447669adcc45527772e17 595 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 211 595 8.0E-163 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05915 fe47f780f2b447669adcc45527772e17 595 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 46 173 4.2E-41 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05915 fe47f780f2b447669adcc45527772e17 595 SUPERFAMILY SSF143243 22 225 3.4E-59 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05915 fe47f780f2b447669adcc45527772e17 595 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 248 259 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05915 fe47f780f2b447669adcc45527772e17 595 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 22 181 25.684 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05915 fe47f780f2b447669adcc45527772e17 595 SUPERFAMILY SSF56762 221 595 1.96E-121 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05915 fe47f780f2b447669adcc45527772e17 595 Gene3D G3DSA:1.10.645.20 210 595 1.0E-143 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05915 fe47f780f2b447669adcc45527772e17 595 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 45 172 1.3E-40 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05915 fe47f780f2b447669adcc45527772e17 595 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 134 155 - T 14-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05915 fe47f780f2b447669adcc45527772e17 595 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 13 595 69.153 T 14-10-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 C3Y93_05915 fe47f780f2b447669adcc45527772e17 595 Gene3D G3DSA:3.30.460.80 5 153 1.6E-35 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05275 a566b6b73752ab7257baed867b833e38 212 SUPERFAMILY SSF101327 7 166 6.28E-34 T 14-10-2018 IPR036255 YgfB-like superfamily C3Y93_05275 a566b6b73752ab7257baed867b833e38 212 Gene3D G3DSA:1.20.120.740 2 180 7.8E-38 T 14-10-2018 C3Y93_05275 a566b6b73752ab7257baed867b833e38 212 Pfam PF03695 Uncharacterised protein family (UPF0149) 22 164 4.3E-21 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 C3Y93_04185 2584af53726767e76e87881feb23a197 1319 Gene3D G3DSA:1.20.120.1080 509 584 1.3E-14 T 14-10-2018 C3Y93_04185 2584af53726767e76e87881feb23a197 1319 Gene3D G3DSA:1.10.10.2130 425 469 1.5E-9 T 14-10-2018 C3Y93_04185 2584af53726767e76e87881feb23a197 1319 Pfam PF04408 Helicase associated domain (HA2) 466 587 2.3E-14 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 C3Y93_04185 2584af53726767e76e87881feb23a197 1319 SMART SM00382 75 384 1.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_04185 2584af53726767e76e87881feb23a197 1319 Gene3D G3DSA:3.40.50.300 236 421 6.4E-51 T 14-10-2018 C3Y93_04185 2584af53726767e76e87881feb23a197 1319 Pfam PF11898 Domain of unknown function (DUF3418) 743 1314 3.8E-144 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal C3Y93_04185 2584af53726767e76e87881feb23a197 1319 SMART SM00847 464 590 3.3E-32 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 C3Y93_04185 2584af53726767e76e87881feb23a197 1319 SMART SM00490 303 404 5.8E-13 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_04185 2584af53726767e76e87881feb23a197 1319 Pfam PF00270 DEAD/DEAH box helicase 66 218 5.4E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C3Y93_04185 2584af53726767e76e87881feb23a197 1319 SUPERFAMILY SSF52540 59 625 1.48E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_04185 2584af53726767e76e87881feb23a197 1319 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 653 728 1.5E-15 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 C3Y93_04185 2584af53726767e76e87881feb23a197 1319 Pfam PF00271 Helicase conserved C-terminal domain 288 403 4.7E-11 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_04185 2584af53726767e76e87881feb23a197 1319 SMART SM00487 58 242 5.1E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3Y93_04185 2584af53726767e76e87881feb23a197 1319 Gene3D G3DSA:3.40.50.300 9 235 7.7E-73 T 14-10-2018 C3Y93_02065 1522ef0b5ecb799a0fab839906ac3004 144 Pfam PF01230 HIT domain 10 98 8.6E-12 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3Y93_02065 1522ef0b5ecb799a0fab839906ac3004 144 SUPERFAMILY SSF54197 1 132 4.89E-30 T 14-10-2018 IPR036265 HIT-like superfamily C3Y93_02065 1522ef0b5ecb799a0fab839906ac3004 144 PIRSF PIRSF000714 1 138 2.6E-47 T 14-10-2018 IPR026026 Histidine triad hydrolase, Hint-type C3Y93_02065 1522ef0b5ecb799a0fab839906ac3004 144 Gene3D G3DSA:3.30.428.10 1 136 6.0E-38 T 14-10-2018 IPR036265 HIT-like superfamily C3Y93_09510 ef239b3f4800e1232849ea3906817043 239 Gene3D G3DSA:3.30.470.20 85 220 2.5E-93 T 14-10-2018 C3Y93_09510 ef239b3f4800e1232849ea3906817043 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 234 2.1E-78 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 C3Y93_09510 ef239b3f4800e1232849ea3906817043 239 Pfam PF01259 SAICAR synthetase 7 231 1.9E-65 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3Y93_09510 ef239b3f4800e1232849ea3906817043 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 31.547 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3Y93_09510 ef239b3f4800e1232849ea3906817043 239 SUPERFAMILY SSF56104 2 232 1.57E-80 T 14-10-2018 C3Y93_09510 ef239b3f4800e1232849ea3906817043 239 Gene3D G3DSA:3.30.200.20 7 231 2.5E-93 T 14-10-2018 C3Y93_09510 ef239b3f4800e1232849ea3906817043 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3Y93_09510 ef239b3f4800e1232849ea3906817043 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C3Y93_14075 077e24a7ecb97aee9a6ac6932e60c9f4 139 Pfam PF14567 SMI1-KNR4 cell-wall 6 135 3.2E-32 T 14-10-2018 C3Y93_14075 077e24a7ecb97aee9a6ac6932e60c9f4 139 Gene3D G3DSA:3.40.1580.10 5 138 1.2E-36 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily C3Y93_14075 077e24a7ecb97aee9a6ac6932e60c9f4 139 SMART SM00860 26 133 1.1E-4 T 14-10-2018 IPR018958 Knr4/Smi1-like domain C3Y93_14075 077e24a7ecb97aee9a6ac6932e60c9f4 139 SUPERFAMILY SSF160631 6 137 3.27E-35 T 14-10-2018 C3Y93_06900 515784b5839b7c519ef4bb4aabe6f3a0 217 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 205 5.3E-57 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 C3Y93_06900 515784b5839b7c519ef4bb4aabe6f3a0 217 SUPERFAMILY SSF51366 4 207 4.24E-57 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3Y93_06900 515784b5839b7c519ef4bb4aabe6f3a0 217 Gene3D G3DSA:3.20.20.70 2 212 4.6E-64 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_06900 515784b5839b7c519ef4bb4aabe6f3a0 217 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 210 38.428 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 C3Y93_08685 a64099f18b6acef219f2bc8ce0574ce0 306 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 2 287 3.8E-142 T 14-10-2018 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1 C3Y93_08685 a64099f18b6acef219f2bc8ce0574ce0 306 Gene3D G3DSA:2.60.130.10 1 306 9.4E-115 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 C3Y93_08685 a64099f18b6acef219f2bc8ce0574ce0 306 Pfam PF00775 Dioxygenase 101 286 2.6E-57 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 C3Y93_08685 a64099f18b6acef219f2bc8ce0574ce0 306 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 133 161 - T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 C3Y93_08685 a64099f18b6acef219f2bc8ce0574ce0 306 Pfam PF04444 Catechol dioxygenase N terminus 23 91 2.4E-20 T 14-10-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 C3Y93_08685 a64099f18b6acef219f2bc8ce0574ce0 306 SUPERFAMILY SSF49482 15 294 3.27E-82 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 C3Y93_07475 db4f0ff6b2ddcc0e843b14d36c90e030 366 Gene3D G3DSA:3.20.20.70 15 366 6.2E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_07475 db4f0ff6b2ddcc0e843b14d36c90e030 366 PIRSF PIRSF000138 5 366 9.0E-118 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 C3Y93_07475 db4f0ff6b2ddcc0e843b14d36c90e030 366 Pfam PF01070 FMN-dependent dehydrogenase 27 363 2.1E-117 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 C3Y93_07475 db4f0ff6b2ddcc0e843b14d36c90e030 366 SUPERFAMILY SSF51395 16 363 7.94E-82 T 14-10-2018 C3Y93_12475 282895f9d51cf5a07a8ddf0959f29208 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 142 6.4E-63 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_12475 282895f9d51cf5a07a8ddf0959f29208 142 Pfam PF00572 Ribosomal protein L13 15 138 4.4E-56 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 C3Y93_12475 282895f9d51cf5a07a8ddf0959f29208 142 Gene3D G3DSA:3.90.1180.10 1 142 5.9E-62 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 C3Y93_12475 282895f9d51cf5a07a8ddf0959f29208 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.809 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 C3Y93_12475 282895f9d51cf5a07a8ddf0959f29208 142 PIRSF PIRSF002181 1 142 4.7E-50 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 C3Y93_12475 282895f9d51cf5a07a8ddf0959f29208 142 SUPERFAMILY SSF52161 1 140 3.79E-58 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 C3Y93_08100 95d5498877cd670bde8d8a778db164c0 182 Pfam PF05239 PRC-barrel domain 102 177 3.2E-7 T 14-10-2018 IPR027275 PRC-barrel domain C3Y93_08100 95d5498877cd670bde8d8a778db164c0 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 12 179 7.3E-45 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 C3Y93_08100 95d5498877cd670bde8d8a778db164c0 182 SUPERFAMILY SSF50346 104 179 2.55E-18 T 14-10-2018 IPR011033 PRC-barrel-like superfamily C3Y93_08100 95d5498877cd670bde8d8a778db164c0 182 Gene3D G3DSA:2.30.30.240 100 182 6.2E-32 T 14-10-2018 C3Y93_08100 95d5498877cd670bde8d8a778db164c0 182 Gene3D G3DSA:2.40.30.60 1 98 1.7E-36 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 C3Y93_08100 95d5498877cd670bde8d8a778db164c0 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 11 182 22.65 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 C3Y93_08100 95d5498877cd670bde8d8a778db164c0 182 SUPERFAMILY SSF50447 10 98 2.61E-22 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3Y93_08100 95d5498877cd670bde8d8a778db164c0 182 Pfam PF01782 RimM N-terminal domain 13 94 3.5E-23 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 C3Y93_01405 8f0862a4032021827c7cc5648951899e 208 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 86 195 1.7E-29 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal C3Y93_01405 8f0862a4032021827c7cc5648951899e 208 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 4 195 4.2E-72 T 14-10-2018 IPR017757 Transcriptional repressor BetI C3Y93_01405 8f0862a4032021827c7cc5648951899e 208 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 203 84.39 T 14-10-2018 IPR017757 Transcriptional repressor BetI C3Y93_01405 8f0862a4032021827c7cc5648951899e 208 Gene3D G3DSA:1.10.357.10 1 205 1.5E-40 T 14-10-2018 C3Y93_01405 8f0862a4032021827c7cc5648951899e 208 SUPERFAMILY SSF46689 3 79 5.13E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_01405 8f0862a4032021827c7cc5648951899e 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 2.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_01405 8f0862a4032021827c7cc5648951899e 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site C3Y93_01405 8f0862a4032021827c7cc5648951899e 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_01405 8f0862a4032021827c7cc5648951899e 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_01405 8f0862a4032021827c7cc5648951899e 208 SUPERFAMILY SSF48498 84 197 3.11E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C3Y93_13575 60acebc2374863a773a9b1e72474c447 352 PRINTS PR00111 Alpha/beta hydrolase fold signature 172 185 4.6E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_13575 60acebc2374863a773a9b1e72474c447 352 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 127 4.6E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_13575 60acebc2374863a773a9b1e72474c447 352 PRINTS PR00111 Alpha/beta hydrolase fold signature 279 293 4.6E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_13575 60acebc2374863a773a9b1e72474c447 352 PRINTS PR00111 Alpha/beta hydrolase fold signature 158 171 4.6E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_13575 60acebc2374863a773a9b1e72474c447 352 Gene3D G3DSA:3.40.50.1820 46 342 8.0E-75 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_13575 60acebc2374863a773a9b1e72474c447 352 Pfam PF00561 alpha/beta hydrolase fold 87 322 3.8E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_13575 60acebc2374863a773a9b1e72474c447 352 SUPERFAMILY SSF53474 63 335 1.61E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 361 1.8E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 Pfam PF00989 PAS fold 8 100 4.1E-11 T 14-10-2018 IPR013767 PAS fold GO:0006355 C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 310 2.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 361 2.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 343 2.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 SMART SM00387 241 364 4.2E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 194 4.8E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 Gene3D G3DSA:3.30.450.20 8 120 1.3E-15 T 14-10-2018 C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 SMART SM00388 137 201 1.3E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 SUPERFAMILY SSF55785 9 108 1.54E-9 T 14-10-2018 IPR035965 PAS domain superfamily C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 SUPERFAMILY SSF55874 203 362 1.44E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 Gene3D G3DSA:3.30.565.10 201 362 5.9E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 SUPERFAMILY SSF47384 130 197 1.37E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 SMART SM00091 7 74 2.8E-6 T 14-10-2018 IPR000014 PAS domain C3Y93_01880 0f451eb2a119b2e81e1fe7b094836d70 369 Gene3D G3DSA:1.10.287.130 140 197 3.4E-14 T 14-10-2018 C3Y93_13795 60c9c5a6cd12ef03c53292379c974d73 184 SUPERFAMILY SSF55620 2 181 5.11E-74 T 14-10-2018 C3Y93_13795 60c9c5a6cd12ef03c53292379c974d73 184 Gene3D G3DSA:1.10.286.10 1 49 9.3E-18 T 14-10-2018 C3Y93_13795 60c9c5a6cd12ef03c53292379c974d73 184 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 181 35.049 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 C3Y93_13795 60c9c5a6cd12ef03c53292379c974d73 184 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 3 180 2.4E-71 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 C3Y93_13795 60c9c5a6cd12ef03c53292379c974d73 184 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 108 118 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 C3Y93_13795 60c9c5a6cd12ef03c53292379c974d73 184 Gene3D G3DSA:3.30.1130.10 51 183 3.0E-59 T 14-10-2018 C3Y93_13795 60c9c5a6cd12ef03c53292379c974d73 184 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 60 76 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 C3Y93_13795 60c9c5a6cd12ef03c53292379c974d73 184 Pfam PF01227 GTP cyclohydrolase I 4 180 1.0E-72 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 C3Y93_12750 7bf7a7667f8ad0fdf0554f83a2eb202e 469 SMART SM00963 1 86 1.3E-36 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3Y93_12750 7bf7a7667f8ad0fdf0554f83a2eb202e 469 SMART SM00382 99 247 2.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_12750 7bf7a7667f8ad0fdf0554f83a2eb202e 469 Pfam PF02978 Signal peptide binding domain 329 429 1.0E-30 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 C3Y93_12750 7bf7a7667f8ad0fdf0554f83a2eb202e 469 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 431 1.4E-176 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 C3Y93_12750 7bf7a7667f8ad0fdf0554f83a2eb202e 469 SMART SM00962 100 296 7.1E-113 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3Y93_12750 7bf7a7667f8ad0fdf0554f83a2eb202e 469 Gene3D G3DSA:1.20.120.140 5 305 7.5E-123 T 14-10-2018 C3Y93_12750 7bf7a7667f8ad0fdf0554f83a2eb202e 469 SUPERFAMILY SSF52540 42 351 4.18E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_12750 7bf7a7667f8ad0fdf0554f83a2eb202e 469 Gene3D G3DSA:3.40.50.300 90 285 7.5E-123 T 14-10-2018 C3Y93_12750 7bf7a7667f8ad0fdf0554f83a2eb202e 469 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 9.5E-74 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3Y93_12750 7bf7a7667f8ad0fdf0554f83a2eb202e 469 SUPERFAMILY SSF47446 298 432 4.71E-44 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 C3Y93_12750 7bf7a7667f8ad0fdf0554f83a2eb202e 469 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3Y93_12750 7bf7a7667f8ad0fdf0554f83a2eb202e 469 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 442 34.212 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 C3Y93_12750 7bf7a7667f8ad0fdf0554f83a2eb202e 469 Gene3D G3DSA:1.10.260.30 310 447 5.6E-38 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 C3Y93_12750 7bf7a7667f8ad0fdf0554f83a2eb202e 469 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.5E-22 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C3Y93_04770 e685c235e5418d3c61b107888a669e80 149 Pfam PF00583 Acetyltransferase (GNAT) family 45 138 1.7E-4 T 14-10-2018 IPR000182 GNAT domain C3Y93_04770 e685c235e5418d3c61b107888a669e80 149 SUPERFAMILY SSF55729 1 146 2.96E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3Y93_04770 e685c235e5418d3c61b107888a669e80 149 Gene3D G3DSA:3.40.630.30 1 149 2.1E-15 T 14-10-2018 C3Y93_04120 60db3b8df8d7debfae91f2ebbe8a47ca 239 SUPERFAMILY SSF55166 99 232 2.67E-15 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 C3Y93_04120 60db3b8df8d7debfae91f2ebbe8a47ca 239 Pfam PF08291 Peptidase M15 140 176 9.1E-6 T 14-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 C3Y93_04120 60db3b8df8d7debfae91f2ebbe8a47ca 239 Gene3D G3DSA:3.30.1380.10 132 230 5.3E-5 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 C3Y93_03460 8b1ef79b5fee97553977943f1673da43 241 Pfam PF09992 Phosphodiester glycosidase 65 214 9.3E-21 T 14-10-2018 IPR018711 Phosphodiester glycosidase C3Y93_01435 7297e1018cb0030c6bf93efe9b88404e 173 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 166 1.9E-60 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 C3Y93_01435 7297e1018cb0030c6bf93efe9b88404e 173 SUPERFAMILY SSF52540 2 169 1.97E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01435 7297e1018cb0030c6bf93efe9b88404e 173 Gene3D G3DSA:3.40.50.300 2 169 4.4E-56 T 14-10-2018 C3Y93_01435 7297e1018cb0030c6bf93efe9b88404e 173 PIRSF PIRSF006135 1 171 1.2E-54 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 C3Y93_06630 b111c66e52c08d194d50fecf29513818 273 Gene3D G3DSA:3.90.226.10 1 267 2.0E-95 T 14-10-2018 C3Y93_06630 b111c66e52c08d194d50fecf29513818 273 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 267 38.804 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_06630 b111c66e52c08d194d50fecf29513818 273 SUPERFAMILY SSF52096 8 265 5.41E-85 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_06630 b111c66e52c08d194d50fecf29513818 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 40 51 2.6E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_06630 b111c66e52c08d194d50fecf29513818 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 149 158 2.6E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_06630 b111c66e52c08d194d50fecf29513818 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 86 102 2.6E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_06630 b111c66e52c08d194d50fecf29513818 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 65 83 2.6E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_06630 b111c66e52c08d194d50fecf29513818 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 121 134 2.6E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_06630 b111c66e52c08d194d50fecf29513818 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 105 118 2.6E-40 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_06630 b111c66e52c08d194d50fecf29513818 273 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 7 266 8.7E-115 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_06630 b111c66e52c08d194d50fecf29513818 273 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 100 3.7E-46 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C3Y93_05180 f9bd62616d1535840abb4e9eed201c64 414 SUPERFAMILY SSF51395 1 344 7.85E-101 T 14-10-2018 C3Y93_05180 f9bd62616d1535840abb4e9eed201c64 414 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 341 4.0E-55 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 C3Y93_05180 f9bd62616d1535840abb4e9eed201c64 414 Gene3D G3DSA:3.20.20.70 1 357 1.8E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_07755 4a4ae5e11ec650c9561f037d11f5ae4e 137 Gene3D G3DSA:3.90.1170.10 1 137 6.2E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 C3Y93_07755 4a4ae5e11ec650c9561f037d11f5ae4e 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.1E-47 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 C3Y93_07755 4a4ae5e11ec650c9561f037d11f5ae4e 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 36.626 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07755 4a4ae5e11ec650c9561f037d11f5ae4e 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.2E-56 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07755 4a4ae5e11ec650c9561f037d11f5ae4e 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 5.9E-37 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07755 4a4ae5e11ec650c9561f037d11f5ae4e 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 5.9E-37 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07755 4a4ae5e11ec650c9561f037d11f5ae4e 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 5.9E-37 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07755 4a4ae5e11ec650c9561f037d11f5ae4e 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 5.9E-37 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07755 4a4ae5e11ec650c9561f037d11f5ae4e 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07755 4a4ae5e11ec650c9561f037d11f5ae4e 137 SUPERFAMILY SSF54686 1 134 5.36E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 C3Y93_03980 0ee08f10e498d2ba911db9ba91b8aa8a 118 Gene3D G3DSA:3.40.250.10 12 116 1.7E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3Y93_03980 0ee08f10e498d2ba911db9ba91b8aa8a 118 SUPERFAMILY SSF52821 4 113 1.96E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3Y93_03980 0ee08f10e498d2ba911db9ba91b8aa8a 118 Pfam PF00581 Rhodanese-like domain 21 107 2.1E-14 T 14-10-2018 IPR001763 Rhodanese-like domain C3Y93_03980 0ee08f10e498d2ba911db9ba91b8aa8a 118 SMART SM00450 14 111 2.9E-18 T 14-10-2018 IPR001763 Rhodanese-like domain C3Y93_03380 7b58371013fe36a5a8d679b641c58eaa 243 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 17 237 1.4E-64 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 C3Y93_03380 7b58371013fe36a5a8d679b641c58eaa 243 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 15 237 39.235 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 C3Y93_03380 7b58371013fe36a5a8d679b641c58eaa 243 Gene3D G3DSA:3.90.550.10 11 242 4.3E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_03380 7b58371013fe36a5a8d679b641c58eaa 243 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 17 238 1.9E-61 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 C3Y93_03380 7b58371013fe36a5a8d679b641c58eaa 243 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 113 120 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 C3Y93_03380 7b58371013fe36a5a8d679b641c58eaa 243 SUPERFAMILY SSF53448 16 237 6.98E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_04700 8fce793fc8a413e13bc0ae028338ab49 379 Gene3D G3DSA:3.30.160.390 1 85 1.2E-23 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily C3Y93_04700 8fce793fc8a413e13bc0ae028338ab49 379 SUPERFAMILY SSF56349 87 366 3.53E-53 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3Y93_04700 8fce793fc8a413e13bc0ae028338ab49 379 Pfam PF00589 Phage integrase family 194 356 2.7E-16 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3Y93_04700 8fce793fc8a413e13bc0ae028338ab49 379 Gene3D G3DSA:1.10.443.10 196 365 2.5E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3Y93_04700 8fce793fc8a413e13bc0ae028338ab49 379 Gene3D G3DSA:1.10.150.130 86 195 5.3E-26 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C3Y93_04700 8fce793fc8a413e13bc0ae028338ab49 379 Pfam PF13356 Arm DNA-binding domain 3 77 4.9E-12 T 14-10-2018 IPR025166 Integrase, DNA-binding domain C3Y93_02635 8235f36800dbd77dd7c70dfe67818ded 449 SUPERFAMILY SSF56935 98 449 4.33E-22 T 14-10-2018 C3Y93_11415 f8976bfa1d10831ef865ba59ba8bfd24 602 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 251 275 8.8E-8 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_11415 f8976bfa1d10831ef865ba59ba8bfd24 602 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 394 420 8.8E-8 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_11415 f8976bfa1d10831ef865ba59ba8bfd24 602 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 178 202 8.8E-8 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_11415 f8976bfa1d10831ef865ba59ba8bfd24 602 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 148 167 8.8E-8 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_11415 f8976bfa1d10831ef865ba59ba8bfd24 602 Pfam PF00361 Proton-conducting membrane transporter 143 435 1.5E-38 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_12100 06b7d1496f44f5486cb17c1e4b2428db 191 Gene3D G3DSA:3.40.50.2020 3 188 2.9E-53 T 14-10-2018 C3Y93_12100 06b7d1496f44f5486cb17c1e4b2428db 191 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 3 190 6.7E-85 T 14-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 C3Y93_12100 06b7d1496f44f5486cb17c1e4b2428db 191 SUPERFAMILY SSF53271 5 187 1.75E-44 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3Y93_12100 06b7d1496f44f5486cb17c1e4b2428db 191 Pfam PF00156 Phosphoribosyl transferase domain 48 157 2.5E-7 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C3Y93_12100 06b7d1496f44f5486cb17c1e4b2428db 191 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 41.684 T 14-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 C3Y93_14150 13f90fb1430ac5f55cba2f33fa12f606 248 SMART SM00382 106 234 0.0011 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_14150 13f90fb1430ac5f55cba2f33fa12f606 248 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 137 151 6.3E-6 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C3Y93_14150 13f90fb1430ac5f55cba2f33fa12f606 248 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 171 185 6.3E-6 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C3Y93_14150 13f90fb1430ac5f55cba2f33fa12f606 248 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 205 232 6.3E-6 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C3Y93_14150 13f90fb1430ac5f55cba2f33fa12f606 248 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 107 127 6.3E-6 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C3Y93_14150 13f90fb1430ac5f55cba2f33fa12f606 248 Gene3D G3DSA:3.40.50.300 54 231 2.3E-37 T 14-10-2018 C3Y93_14150 13f90fb1430ac5f55cba2f33fa12f606 248 SUPERFAMILY SSF52540 103 229 5.35E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_14150 13f90fb1430ac5f55cba2f33fa12f606 248 Pfam PF01695 IstB-like ATP binding protein 106 223 4.3E-20 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 C3Y93_07795 30754b50b4a1c114facd78fddb6cd26e 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.255 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07795 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-16 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07795 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-16 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07795 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-16 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07795 30754b50b4a1c114facd78fddb6cd26e 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 6.9E-36 T 14-10-2018 IPR027486 Ribosomal protein S10 domain C3Y93_07795 30754b50b4a1c114facd78fddb6cd26e 103 SMART SM01403 7 101 4.5E-55 T 14-10-2018 IPR027486 Ribosomal protein S10 domain C3Y93_07795 30754b50b4a1c114facd78fddb6cd26e 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.9E-45 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07795 30754b50b4a1c114facd78fddb6cd26e 103 SUPERFAMILY SSF54999 5 101 1.31E-36 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily C3Y93_07795 30754b50b4a1c114facd78fddb6cd26e 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07795 30754b50b4a1c114facd78fddb6cd26e 103 Gene3D G3DSA:3.30.70.600 1 103 7.2E-37 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily C3Y93_14225 3a72f3dd3cc9fbd936e3c04e9988eb63 273 Pfam PF07751 Abi-like protein 7 185 1.3E-37 T 14-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like C3Y93_08295 e0bce014f07c8140c186f7f75b62b107 850 Pfam PF00905 Penicillin binding protein transpeptidase domain 423 597 4.4E-26 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 C3Y93_08295 e0bce014f07c8140c186f7f75b62b107 850 SUPERFAMILY SSF56601 217 755 5.81E-123 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3Y93_08295 e0bce014f07c8140c186f7f75b62b107 850 Pfam PF17092 Penicillin-binding protein OB-like domain 325 419 4.5E-19 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_08295 e0bce014f07c8140c186f7f75b62b107 850 Gene3D G3DSA:1.10.3810.10 55 250 5.1E-73 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_08295 e0bce014f07c8140c186f7f75b62b107 850 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 74 745 4.9E-180 T 14-10-2018 C3Y93_08295 e0bce014f07c8140c186f7f75b62b107 850 SUPERFAMILY SSF53955 54 262 6.19E-74 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3Y93_08295 e0bce014f07c8140c186f7f75b62b107 850 Gene3D G3DSA:2.40.50.140 322 416 1.3E-28 T 14-10-2018 C3Y93_08295 e0bce014f07c8140c186f7f75b62b107 850 Pfam PF00912 Transglycosylase 61 235 9.0E-60 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_13820 7c1cc5820c384a77d8a7bd766a310651 469 Gene3D G3DSA:3.10.20.70 1 103 1.9E-38 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C3Y93_13820 7c1cc5820c384a77d8a7bd766a310651 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 94 1.4E-31 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 C3Y93_13820 7c1cc5820c384a77d8a7bd766a310651 469 SUPERFAMILY SSF55931 101 468 3.29E-129 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 C3Y93_13820 7c1cc5820c384a77d8a7bd766a310651 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 49 67 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 C3Y93_13820 7c1cc5820c384a77d8a7bd766a310651 469 SUPERFAMILY SSF54368 2 99 1.44E-35 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C3Y93_13820 7c1cc5820c384a77d8a7bd766a310651 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C3Y93_13820 7c1cc5820c384a77d8a7bd766a310651 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 2.3E-195 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C3Y93_13820 7c1cc5820c384a77d8a7bd766a310651 469 SMART SM01230 101 379 4.5E-130 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C3Y93_13820 7c1cc5820c384a77d8a7bd766a310651 469 Gene3D G3DSA:3.30.590.10 104 457 2.6E-136 T 14-10-2018 C3Y93_13820 7c1cc5820c384a77d8a7bd766a310651 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 C3Y93_13820 7c1cc5820c384a77d8a7bd766a310651 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 4.6E-131 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C3Y93_03105 20646b45d3160dcc8e2c24ebd24b1cee 420 Gene3D G3DSA:1.10.443.10 204 403 3.0E-30 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3Y93_03105 20646b45d3160dcc8e2c24ebd24b1cee 420 Gene3D G3DSA:1.10.150.130 93 203 1.9E-7 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C3Y93_03105 20646b45d3160dcc8e2c24ebd24b1cee 420 SUPERFAMILY SSF56349 97 390 1.47E-41 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3Y93_03105 20646b45d3160dcc8e2c24ebd24b1cee 420 Pfam PF13356 Arm DNA-binding domain 3 82 6.9E-7 T 14-10-2018 IPR025166 Integrase, DNA-binding domain C3Y93_03105 20646b45d3160dcc8e2c24ebd24b1cee 420 Pfam PF00589 Phage integrase family 233 367 2.3E-16 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3Y93_07015 043ce03c9f82bac49fa6c84ee2425bfe 428 Gene3D G3DSA:3.40.50.2000 192 381 7.6E-17 T 14-10-2018 C3Y93_07015 043ce03c9f82bac49fa6c84ee2425bfe 428 SUPERFAMILY SSF53756 81 394 3.45E-21 T 14-10-2018 C3Y93_07015 043ce03c9f82bac49fa6c84ee2425bfe 428 Pfam PF00534 Glycosyl transferases group 1 223 372 6.0E-9 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3Y93_03870 e26705bf08338e09543ba84ac4ac9a4f 392 Gene3D G3DSA:3.40.47.10 126 388 6.2E-155 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_03870 e26705bf08338e09543ba84ac4ac9a4f 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 C3Y93_03870 e26705bf08338e09543ba84ac4ac9a4f 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 C3Y93_03870 e26705bf08338e09543ba84ac4ac9a4f 392 PIRSF PIRSF000429 1 392 1.8E-130 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3Y93_03870 e26705bf08338e09543ba84ac4ac9a4f 392 SUPERFAMILY SSF53901 270 391 1.56E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_03870 e26705bf08338e09543ba84ac4ac9a4f 392 Pfam PF00108 Thiolase, N-terminal domain 4 261 1.5E-100 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 C3Y93_03870 e26705bf08338e09543ba84ac4ac9a4f 392 SUPERFAMILY SSF53901 3 269 1.5E-84 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_03870 e26705bf08338e09543ba84ac4ac9a4f 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 C3Y93_03870 e26705bf08338e09543ba84ac4ac9a4f 392 Gene3D G3DSA:3.40.47.10 5 275 6.2E-155 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_03870 e26705bf08338e09543ba84ac4ac9a4f 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 1.1E-141 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3Y93_03870 e26705bf08338e09543ba84ac4ac9a4f 392 Pfam PF02803 Thiolase, C-terminal domain 270 391 5.5E-52 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 C3Y93_03940 f938f803c3c267cbe88063fb2292406f 231 Gene3D G3DSA:1.10.3720.10 20 230 3.6E-44 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_03940 f938f803c3c267cbe88063fb2292406f 231 SUPERFAMILY SSF161098 25 219 5.36E-42 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_03940 f938f803c3c267cbe88063fb2292406f 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 63 228 2.7E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3Y93_01425 9251dd34913631e14f648761b33eaa4c 288 Pfam PF09313 Domain of unknown function (DUF1971) 9 89 1.9E-29 T 14-10-2018 IPR015392 Domain of unknown function DUF1971 C3Y93_01425 9251dd34913631e14f648761b33eaa4c 288 Pfam PF03848 Tellurite resistance protein TehB 91 284 1.5E-76 T 14-10-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain C3Y93_01425 9251dd34913631e14f648761b33eaa4c 288 Gene3D G3DSA:3.40.50.150 108 288 1.1E-38 T 14-10-2018 C3Y93_01425 9251dd34913631e14f648761b33eaa4c 288 Gene3D G3DSA:2.60.120.10 1 107 6.0E-40 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3Y93_01425 9251dd34913631e14f648761b33eaa4c 288 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 49 287 8.2E-90 T 14-10-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 C3Y93_01425 9251dd34913631e14f648761b33eaa4c 288 SUPERFAMILY SSF53335 68 275 1.0E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_01425 9251dd34913631e14f648761b33eaa4c 288 SUPERFAMILY SSF51197 2 102 8.38E-36 T 14-10-2018 C3Y93_01425 9251dd34913631e14f648761b33eaa4c 288 PIRSF PIRSF005215 1 288 1.3E-119 T 14-10-2018 IPR014431 Tellurite resistance methyltransferase, TehB type-2 C3Y93_05350 b1b86d8329c4b38bd3c4e0e820800001 225 Pfam PF00072 Response regulator receiver domain 4 113 8.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_05350 b1b86d8329c4b38bd3c4e0e820800001 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 222 3.9E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_05350 b1b86d8329c4b38bd3c4e0e820800001 225 SMART SM00448 2 113 9.4E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_05350 b1b86d8329c4b38bd3c4e0e820800001 225 SUPERFAMILY SSF52172 1 183 3.66E-38 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_05350 b1b86d8329c4b38bd3c4e0e820800001 225 SMART SM00862 151 222 1.3E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C3Y93_05350 b1b86d8329c4b38bd3c4e0e820800001 225 Gene3D G3DSA:3.40.50.2300 1 123 1.7E-36 T 14-10-2018 C3Y93_05350 b1b86d8329c4b38bd3c4e0e820800001 225 Gene3D G3DSA:1.10.10.10 127 224 6.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_04385 41d5259b7085ffbc369c3a3942aebdfe 336 Gene3D G3DSA:3.40.1030.10 89 336 7.2E-60 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3Y93_04385 41d5259b7085ffbc369c3a3942aebdfe 336 SUPERFAMILY SSF47648 26 86 4.97E-16 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3Y93_04385 41d5259b7085ffbc369c3a3942aebdfe 336 Pfam PF02885 Glycosyl transferase family, helical bundle domain 27 84 6.8E-16 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3Y93_04385 41d5259b7085ffbc369c3a3942aebdfe 336 Gene3D G3DSA:1.20.970.10 18 87 2.7E-26 T 14-10-2018 C3Y93_04385 41d5259b7085ffbc369c3a3942aebdfe 336 Pfam PF00591 Glycosyl transferase family, a/b domain 112 330 4.0E-9 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3Y93_04385 41d5259b7085ffbc369c3a3942aebdfe 336 SUPERFAMILY SSF52418 90 335 1.57E-58 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3Y93_04420 3ef1e97e0fe4f2bee660be2b78680430 449 Gene3D G3DSA:3.30.565.10 295 446 2.8E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_04420 3ef1e97e0fe4f2bee660be2b78680430 449 SUPERFAMILY SSF47384 211 292 9.61E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3Y93_04420 3ef1e97e0fe4f2bee660be2b78680430 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 292 4.7E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_04420 3ef1e97e0fe4f2bee660be2b78680430 449 SMART SM00387 339 448 3.8E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_04420 3ef1e97e0fe4f2bee660be2b78680430 449 Gene3D G3DSA:1.10.287.130 177 294 4.9E-21 T 14-10-2018 C3Y93_04420 3ef1e97e0fe4f2bee660be2b78680430 449 SMART SM00388 228 294 7.4E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_04420 3ef1e97e0fe4f2bee660be2b78680430 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 2.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_04420 3ef1e97e0fe4f2bee660be2b78680430 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 2.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_04420 3ef1e97e0fe4f2bee660be2b78680430 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 447 3.7E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_04420 3ef1e97e0fe4f2bee660be2b78680430 449 SUPERFAMILY SSF55874 299 446 5.89E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_02125 b8dab3352c59333844dc0d9b0541303c 155 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 31 141 6.4E-33 T 14-10-2018 IPR008769 Poly granule associated C3Y93_10405 e21529508af5c608245b8a33f053b641 566 SMART SM00919 272 532 3.1E-127 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 SUPERFAMILY SSF53223 4 271 3.38E-109 T 14-10-2018 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 Gene3D G3DSA:3.40.50.10380 17 269 2.2E-114 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 Gene3D G3DSA:3.40.50.720 270 566 7.5E-108 T 14-10-2018 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 5 566 70.063 T 14-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 SMART SM01274 82 262 1.6E-105 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 PIRSF PIRSF000106 2 564 1.3E-227 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 Pfam PF00390 Malic enzyme, N-terminal domain 82 262 9.0E-78 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 PRINTS PR00072 Malic enzyme signature 268 284 4.7E-74 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 PRINTS PR00072 Malic enzyme signature 409 425 4.7E-74 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 PRINTS PR00072 Malic enzyme signature 184 206 4.7E-74 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 PRINTS PR00072 Malic enzyme signature 243 261 4.7E-74 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 PRINTS PR00072 Malic enzyme signature 88 112 4.7E-74 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 PRINTS PR00072 Malic enzyme signature 299 315 4.7E-74 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 PRINTS PR00072 Malic enzyme signature 148 177 4.7E-74 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 Pfam PF03949 Malic enzyme, NAD binding domain 272 531 6.4E-99 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 C3Y93_10405 e21529508af5c608245b8a33f053b641 566 SUPERFAMILY SSF51735 272 564 8.71E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_10405 e21529508af5c608245b8a33f053b641 566 ProSitePatterns PS00331 Malic enzymes signature. 268 284 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 C3Y93_13605 59aaf469b6f23ed25b2c6b7a449fa206 224 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 7 224 37.803 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_13605 59aaf469b6f23ed25b2c6b7a449fa206 224 Pfam PF00912 Transglycosylase 52 218 8.5E-57 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_13605 59aaf469b6f23ed25b2c6b7a449fa206 224 Gene3D G3DSA:1.10.3810.10 47 223 2.2E-58 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_13605 59aaf469b6f23ed25b2c6b7a449fa206 224 SUPERFAMILY SSF53955 50 220 1.29E-60 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3Y93_13605 59aaf469b6f23ed25b2c6b7a449fa206 224 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 9 224 1.4E-98 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_05990 3a58d55f22ce08acb934a17c9947b75d 484 Pfam PF00575 S1 RNA binding domain 38 111 9.7E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3Y93_05990 3a58d55f22ce08acb934a17c9947b75d 484 SMART SM00316 37 113 3.0E-13 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3Y93_05990 3a58d55f22ce08acb934a17c9947b75d 484 Pfam PF10150 Ribonuclease E/G family 115 387 4.6E-102 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 C3Y93_05990 3a58d55f22ce08acb934a17c9947b75d 484 Gene3D G3DSA:2.40.50.140 31 118 2.5E-25 T 14-10-2018 C3Y93_05990 3a58d55f22ce08acb934a17c9947b75d 484 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 420 2.9E-154 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 C3Y93_05990 3a58d55f22ce08acb934a17c9947b75d 484 SUPERFAMILY SSF50249 39 118 9.53E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_06570 462af8f3d10c86f4a78c1803e67b6fee 175 SUPERFAMILY SSF52091 8 105 4.12E-13 T 14-10-2018 IPR036513 STAS domain superfamily C3Y93_06570 462af8f3d10c86f4a78c1803e67b6fee 175 Gene3D G3DSA:3.30.750.24 4 109 3.2E-11 T 14-10-2018 IPR036513 STAS domain superfamily C3Y93_06570 462af8f3d10c86f4a78c1803e67b6fee 175 PIRSF PIRSF029548 1 160 9.5E-34 T 14-10-2018 IPR014557 Uncharacterised conserved protein UCP029548, STAS-type C3Y93_04490 bc5222be647e2da0f730ea2955766726 142 Gene3D G3DSA:3.40.30.10 2 142 1.3E-54 T 14-10-2018 C3Y93_04490 bc5222be647e2da0f730ea2955766726 142 SUPERFAMILY SSF52833 4 138 7.78E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_04490 bc5222be647e2da0f730ea2955766726 142 Pfam PF03960 ArsC family 12 114 1.6E-14 T 14-10-2018 IPR006660 Arsenate reductase-like C3Y93_04490 bc5222be647e2da0f730ea2955766726 142 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 117 8.0E-40 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 C3Y93_01460 7adf3d712be3170758a24b1b4da9f8d8 330 SMART SM00729 43 252 2.3E-40 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3Y93_01460 7adf3d712be3170758a24b1b4da9f8d8 330 SMART SM00876 220 312 2.4E-42 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3Y93_01460 7adf3d712be3170758a24b1b4da9f8d8 330 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 7.0E-19 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3Y93_01460 7adf3d712be3170758a24b1b4da9f8d8 330 SUPERFAMILY SSF102114 5 312 2.22E-90 T 14-10-2018 C3Y93_01460 7adf3d712be3170758a24b1b4da9f8d8 330 Hamap MF_01694 Biotin synthase [bioB]. 5 313 42.661 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3Y93_01460 7adf3d712be3170758a24b1b4da9f8d8 330 Pfam PF04055 Radical SAM superfamily 50 201 1.6E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3Y93_01460 7adf3d712be3170758a24b1b4da9f8d8 330 PIRSF PIRSF001619 1 318 1.7E-138 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3Y93_01460 7adf3d712be3170758a24b1b4da9f8d8 330 Gene3D G3DSA:3.20.20.70 4 315 3.3E-130 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_01460 7adf3d712be3170758a24b1b4da9f8d8 330 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 4.5E-123 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C3Y93_00390 0df9861ddfcf9dae8e0aaf7151354af0 320 Pfam PF01343 Peptidase family S49 119 260 1.8E-39 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 C3Y93_00390 0df9861ddfcf9dae8e0aaf7151354af0 320 Pfam PF08496 Peptidase family S49 N-terminal 10 115 3.2E-31 T 14-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 C3Y93_00390 0df9861ddfcf9dae8e0aaf7151354af0 320 Gene3D G3DSA:3.90.226.10 90 258 1.6E-38 T 14-10-2018 C3Y93_00390 0df9861ddfcf9dae8e0aaf7151354af0 320 Gene3D G3DSA:3.40.1750.20 159 223 1.6E-38 T 14-10-2018 C3Y93_00390 0df9861ddfcf9dae8e0aaf7151354af0 320 SUPERFAMILY SSF52096 55 256 9.04E-24 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_10605 b3de86c26f5c81d489f99d5ce495f1bb 181 PRINTS PR01011 Glutathione peroxidase family signature 141 150 4.7E-18 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3Y93_10605 b3de86c26f5c81d489f99d5ce495f1bb 181 PRINTS PR01011 Glutathione peroxidase family signature 23 40 4.7E-18 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3Y93_10605 b3de86c26f5c81d489f99d5ce495f1bb 181 PRINTS PR01011 Glutathione peroxidase family signature 58 74 4.7E-18 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3Y93_10605 b3de86c26f5c81d489f99d5ce495f1bb 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 C3Y93_10605 b3de86c26f5c81d489f99d5ce495f1bb 181 SUPERFAMILY SSF52833 3 179 3.95E-52 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_10605 b3de86c26f5c81d489f99d5ce495f1bb 181 PIRSF PIRSF000303 1 181 1.7E-58 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3Y93_10605 b3de86c26f5c81d489f99d5ce495f1bb 181 Pfam PF00255 Glutathione peroxidase 5 111 1.3E-36 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3Y93_10605 b3de86c26f5c81d489f99d5ce495f1bb 181 Gene3D G3DSA:3.40.30.10 1 181 2.5E-58 T 14-10-2018 C3Y93_07770 80d31edd659eb0810f3ff6af1bdf53d1 91 SUPERFAMILY SSF54570 3 84 5.75E-34 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07770 80d31edd659eb0810f3ff6af1bdf53d1 91 PIRSF PIRSF002144 1 91 3.2E-31 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07770 80d31edd659eb0810f3ff6af1bdf53d1 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 3.1E-43 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 C3Y93_07770 80d31edd659eb0810f3ff6af1bdf53d1 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.5E-22 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07770 80d31edd659eb0810f3ff6af1bdf53d1 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.5E-22 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07770 80d31edd659eb0810f3ff6af1bdf53d1 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.5E-22 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07770 80d31edd659eb0810f3ff6af1bdf53d1 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.706 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07770 80d31edd659eb0810f3ff6af1bdf53d1 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07770 80d31edd659eb0810f3ff6af1bdf53d1 91 Gene3D G3DSA:3.30.860.10 1 91 4.4E-39 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07770 80d31edd659eb0810f3ff6af1bdf53d1 91 Pfam PF00203 Ribosomal protein S19 3 83 6.5E-35 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_03215 f2d2f2079915953ed1b6f74ff292af2f 512 SUPERFAMILY SSF53686 6 363 7.86E-95 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3Y93_03215 f2d2f2079915953ed1b6f74ff292af2f 512 Gene3D G3DSA:3.40.1020.10 336 512 2.3E-63 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 C3Y93_03215 f2d2f2079915953ed1b6f74ff292af2f 512 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 C3Y93_03215 f2d2f2079915953ed1b6f74ff292af2f 512 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 5 511 2.9E-216 T 14-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 C3Y93_03215 f2d2f2079915953ed1b6f74ff292af2f 512 Gene3D G3DSA:3.40.50.1100 14 325 4.3E-128 T 14-10-2018 C3Y93_03215 f2d2f2079915953ed1b6f74ff292af2f 512 Gene3D G3DSA:3.40.50.1100 50 146 4.3E-128 T 14-10-2018 C3Y93_03215 f2d2f2079915953ed1b6f74ff292af2f 512 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 421 511 2.0E-23 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 C3Y93_03215 f2d2f2079915953ed1b6f74ff292af2f 512 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 327 416 4.1E-23 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 C3Y93_03215 f2d2f2079915953ed1b6f74ff292af2f 512 SUPERFAMILY SSF55021 335 420 1.99E-24 T 14-10-2018 C3Y93_03215 f2d2f2079915953ed1b6f74ff292af2f 512 SUPERFAMILY SSF55021 417 511 2.75E-24 T 14-10-2018 C3Y93_03215 f2d2f2079915953ed1b6f74ff292af2f 512 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 314 6.2E-74 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3Y93_02660 7927b1a6fc381d2cccdddb1d83111360 306 Pfam PF00775 Dioxygenase 101 288 1.8E-59 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 C3Y93_02660 7927b1a6fc381d2cccdddb1d83111360 306 Pfam PF04444 Catechol dioxygenase N terminus 23 92 6.9E-21 T 14-10-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 C3Y93_02660 7927b1a6fc381d2cccdddb1d83111360 306 SUPERFAMILY SSF49482 15 294 1.57E-83 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 C3Y93_02660 7927b1a6fc381d2cccdddb1d83111360 306 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 133 161 - T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 C3Y93_02660 7927b1a6fc381d2cccdddb1d83111360 306 Gene3D G3DSA:2.60.130.10 1 306 1.6E-116 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 C3Y93_02660 7927b1a6fc381d2cccdddb1d83111360 306 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 2 287 4.6E-141 T 14-10-2018 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1 C3Y93_09865 23616fe7ecf827c7c03a09894def59bf 113 Pfam PF04342 Putative member of DMT superfamily (DUF486) 5 110 7.1E-40 T 14-10-2018 IPR007437 Protein of unknown function DUF486 C3Y93_09865 23616fe7ecf827c7c03a09894def59bf 113 PIRSF PIRSF021239 1 113 2.3E-46 T 14-10-2018 IPR007437 Protein of unknown function DUF486 C3Y93_09610 b44ac714a1c7e5e327508ba70e95fa71 206 Pfam PF01323 DSBA-like thioredoxin domain 94 185 2.4E-16 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 C3Y93_09610 b44ac714a1c7e5e327508ba70e95fa71 206 Gene3D G3DSA:3.40.30.10 24 205 1.0E-51 T 14-10-2018 C3Y93_09610 b44ac714a1c7e5e327508ba70e95fa71 206 PIRSF PIRSF001488 1 205 6.1E-51 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL C3Y93_09610 b44ac714a1c7e5e327508ba70e95fa71 206 SUPERFAMILY SSF52833 24 197 6.03E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_11735 c8022514a2c8f05c8aaf42db40b0c709 613 ProSitePatterns PS00455 Putative AMP-binding domain signature. 218 229 - T 14-10-2018 IPR020845 AMP-binding, conserved site C3Y93_11735 c8022514a2c8f05c8aaf42db40b0c709 613 Gene3D G3DSA:3.40.50.12780 47 473 1.5E-61 T 14-10-2018 C3Y93_11735 c8022514a2c8f05c8aaf42db40b0c709 613 Pfam PF00501 AMP-binding enzyme 51 477 7.2E-62 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3Y93_11735 c8022514a2c8f05c8aaf42db40b0c709 613 SUPERFAMILY SSF56801 47 577 2.09E-96 T 14-10-2018 C3Y93_11735 c8022514a2c8f05c8aaf42db40b0c709 613 Gene3D G3DSA:3.30.300.30 474 575 8.8E-13 T 14-10-2018 C3Y93_11735 c8022514a2c8f05c8aaf42db40b0c709 613 Pfam PF13193 AMP-binding enzyme C-terminal domain 486 565 1.1E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C3Y93_10875 80a34d18bf6ae29465e62de4f1f501bb 515 Pfam PF01676 Metalloenzyme superfamily 11 499 2.5E-76 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 C3Y93_10875 80a34d18bf6ae29465e62de4f1f501bb 515 SUPERFAMILY SSF64158 82 309 1.27E-80 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_10875 80a34d18bf6ae29465e62de4f1f501bb 515 Gene3D G3DSA:3.40.720.10 10 509 3.5E-207 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 C3Y93_10875 80a34d18bf6ae29465e62de4f1f501bb 515 Gene3D G3DSA:3.40.1450.10 82 312 3.5E-207 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_10875 80a34d18bf6ae29465e62de4f1f501bb 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 9 512 48.791 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_10875 80a34d18bf6ae29465e62de4f1f501bb 515 SUPERFAMILY SSF53649 11 511 1.27E-70 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 C3Y93_10875 80a34d18bf6ae29465e62de4f1f501bb 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 87 299 2.2E-77 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_10875 80a34d18bf6ae29465e62de4f1f501bb 515 PIRSF PIRSF001492 4 514 1.6E-196 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_10875 80a34d18bf6ae29465e62de4f1f501bb 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 11 511 1.4E-218 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C3Y93_05395 a84ad84b3a5404eca9b14520d6f983dc 384 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.257 T 14-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 C3Y93_05395 a84ad84b3a5404eca9b14520d6f983dc 384 SUPERFAMILY SSF51395 5 376 7.33E-98 T 14-10-2018 C3Y93_05395 a84ad84b3a5404eca9b14520d6f983dc 384 PIRSF PIRSF000138 1 380 2.5E-119 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 C3Y93_05395 a84ad84b3a5404eca9b14520d6f983dc 384 Pfam PF01070 FMN-dependent dehydrogenase 13 375 8.0E-124 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 C3Y93_05395 a84ad84b3a5404eca9b14520d6f983dc 384 Gene3D G3DSA:3.20.20.70 2 381 1.2E-124 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_05395 a84ad84b3a5404eca9b14520d6f983dc 384 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 C3Y93_13915 9aea4422f892536708f067aba35f375f 304 Gene3D G3DSA:1.10.150.130 1 107 5.5E-22 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C3Y93_13915 9aea4422f892536708f067aba35f375f 304 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 301 50.148 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD C3Y93_13915 9aea4422f892536708f067aba35f375f 304 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 87 1.8E-15 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 C3Y93_13915 9aea4422f892536708f067aba35f375f 304 Gene3D G3DSA:1.10.443.10 113 295 1.5E-55 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3Y93_13915 9aea4422f892536708f067aba35f375f 304 SUPERFAMILY SSF56349 6 295 5.59E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3Y93_13915 9aea4422f892536708f067aba35f375f 304 Pfam PF00589 Phage integrase family 136 287 1.1E-40 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3Y93_13800 7b5da1157372a65b7a0bdaa72109737e 229 Pfam PF01713 Smr domain 143 219 8.1E-20 T 14-10-2018 IPR002625 Smr domain C3Y93_13800 7b5da1157372a65b7a0bdaa72109737e 229 Gene3D G3DSA:3.30.1370.110 95 224 4.8E-32 T 14-10-2018 C3Y93_13800 7b5da1157372a65b7a0bdaa72109737e 229 SUPERFAMILY SSF160443 143 219 9.94E-14 T 14-10-2018 IPR036063 Smr domain superfamily C3Y93_13800 7b5da1157372a65b7a0bdaa72109737e 229 SMART SM00463 138 219 3.0E-9 T 14-10-2018 IPR002625 Smr domain C3Y93_02410 b4580c58ba6b5c929d9c948fc55aae8c 204 SUPERFAMILY SSF51306 61 199 6.28E-20 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily C3Y93_02410 b4580c58ba6b5c929d9c948fc55aae8c 204 Pfam PF00717 Peptidase S24-like 98 144 4.6E-8 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C C3Y93_02410 b4580c58ba6b5c929d9c948fc55aae8c 204 Gene3D G3DSA:2.10.109.10 67 202 2.3E-30 T 14-10-2018 C3Y93_06250 0c2ea56ccb2428f57378278702efe498 217 ProSitePatterns PS01068 OmpA-like domain. 145 189 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 C3Y93_06250 0c2ea56ccb2428f57378278702efe498 217 Gene3D G3DSA:3.30.1330.60 75 216 9.2E-47 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3Y93_06250 0c2ea56ccb2428f57378278702efe498 217 SUPERFAMILY SSF103088 103 213 2.35E-38 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3Y93_06250 0c2ea56ccb2428f57378278702efe498 217 PRINTS PR01021 OMPA domain signature 143 158 1.5E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_06250 0c2ea56ccb2428f57378278702efe498 217 PRINTS PR01021 OMPA domain signature 113 135 1.5E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_06250 0c2ea56ccb2428f57378278702efe498 217 PRINTS PR01021 OMPA domain signature 158 174 1.5E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_06250 0c2ea56ccb2428f57378278702efe498 217 Pfam PF00691 OmpA family 112 207 1.3E-25 T 14-10-2018 IPR006665 OmpA-like domain C3Y93_06250 0c2ea56ccb2428f57378278702efe498 217 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 176 195 5.4E-8 T 14-10-2018 C3Y93_06250 0c2ea56ccb2428f57378278702efe498 217 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 158 175 5.4E-8 T 14-10-2018 C3Y93_06250 0c2ea56ccb2428f57378278702efe498 217 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 196 216 5.4E-8 T 14-10-2018 C3Y93_06835 e3e43a58952813aaa22c958ccb7cb805 66 PIRSF PIRSF039003 3 66 4.0E-35 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 C3Y93_06835 e3e43a58952813aaa22c958ccb7cb805 66 Gene3D G3DSA:1.10.10.600 1 66 1.8E-28 T 14-10-2018 IPR036762 IscX-like superfamily C3Y93_06835 e3e43a58952813aaa22c958ccb7cb805 66 SUPERFAMILY SSF140319 3 64 1.22E-26 T 14-10-2018 IPR036762 IscX-like superfamily C3Y93_06835 e3e43a58952813aaa22c958ccb7cb805 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 3.1E-32 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 C3Y93_06835 e3e43a58952813aaa22c958ccb7cb805 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 65 7.9E-32 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 C3Y93_10945 c4cbdf9e34ab18d6362c7b1756fc1a2c 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 344 368 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_10945 c4cbdf9e34ab18d6362c7b1756fc1a2c 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 28 396 37.134 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_10945 c4cbdf9e34ab18d6362c7b1756fc1a2c 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 384 4.6E-121 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_10945 c4cbdf9e34ab18d6362c7b1756fc1a2c 398 Pfam PF01098 Cell cycle protein 33 386 1.3E-99 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_02550 52cea8804091123a713619703a1922e5 373 Pfam PF01636 Phosphotransferase enzyme family 37 270 1.2E-41 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase C3Y93_02550 52cea8804091123a713619703a1922e5 373 Gene3D G3DSA:3.90.1200.10 121 353 2.8E-61 T 14-10-2018 C3Y93_02550 52cea8804091123a713619703a1922e5 373 SUPERFAMILY SSF56112 15 346 2.74E-59 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3Y93_02550 52cea8804091123a713619703a1922e5 373 Gene3D G3DSA:3.30.200.20 15 116 3.7E-28 T 14-10-2018 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 SUPERFAMILY SSF52833 1 100 5.14E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 1.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 1.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 1.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 1.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 1.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 1.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 479 497 1.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 1.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 1.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 Gene3D G3DSA:3.50.50.60 212 509 5.0E-106 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PIRSF PIRSF000238 1 521 1.9E-251 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 Gene3D G3DSA:3.40.30.80 1 199 2.8E-60 T 14-10-2018 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 504 6.1E-45 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 4.9E-230 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 Pfam PF13192 Thioredoxin domain 120 194 5.1E-9 T 14-10-2018 IPR012336 Thioredoxin-like fold C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 SUPERFAMILY SSF51905 206 514 3.56E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 4.6E-38 T 14-10-2018 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 491 4.6E-38 T 14-10-2018 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 4.6E-38 T 14-10-2018 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 4.6E-38 T 14-10-2018 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 4.6E-38 T 14-10-2018 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 Gene3D G3DSA:3.50.50.60 327 450 5.0E-106 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 C3Y93_04505 236372e5cb186d8730b83c0c926bd7f8 521 SUPERFAMILY SSF52833 103 195 8.96E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_11835 f5c59f99be6d4915650e0affe7410849 506 SMART SM01060 14 398 1.2E-276 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 C3Y93_11835 f5c59f99be6d4915650e0affe7410849 506 SUPERFAMILY SSF56634 11 491 7.59E-208 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 C3Y93_11835 f5c59f99be6d4915650e0affe7410849 506 ProSitePatterns PS00438 Catalase proximal active site signature. 50 66 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 C3Y93_11835 f5c59f99be6d4915650e0affe7410849 506 Pfam PF00199 Catalase 14 395 4.5E-184 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 C3Y93_11835 f5c59f99be6d4915650e0affe7410849 506 PIRSF PIRSF038928 2 489 3.7E-216 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 C3Y93_11835 f5c59f99be6d4915650e0affe7410849 506 PRINTS PR00067 Catalase signature 111 128 9.5E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 C3Y93_11835 f5c59f99be6d4915650e0affe7410849 506 PRINTS PR00067 Catalase signature 27 50 9.5E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 C3Y93_11835 f5c59f99be6d4915650e0affe7410849 506 PRINTS PR00067 Catalase signature 295 322 9.5E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 C3Y93_11835 f5c59f99be6d4915650e0affe7410849 506 PRINTS PR00067 Catalase signature 90 108 9.5E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 C3Y93_11835 f5c59f99be6d4915650e0affe7410849 506 PRINTS PR00067 Catalase signature 327 353 9.5E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 C3Y93_11835 f5c59f99be6d4915650e0affe7410849 506 PRINTS PR00067 Catalase signature 130 148 9.5E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 C3Y93_11835 f5c59f99be6d4915650e0affe7410849 506 Gene3D G3DSA:2.40.180.10 10 492 1.7E-222 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 C3Y93_11835 f5c59f99be6d4915650e0affe7410849 506 Pfam PF06628 Catalase-related immune-responsive 421 483 8.0E-21 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 C3Y93_11555 07b9f0265c296ee677fa24455c73cf1b 518 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 19 495 22.541 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 C3Y93_11555 07b9f0265c296ee677fa24455c73cf1b 518 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 72 458 1.0E-95 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 C3Y93_11555 07b9f0265c296ee677fa24455c73cf1b 518 Pfam PF00795 Carbon-nitrogen hydrolase 227 475 5.4E-30 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 C3Y93_11555 07b9f0265c296ee677fa24455c73cf1b 518 Gene3D G3DSA:3.60.110.10 220 487 8.9E-14 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C3Y93_11555 07b9f0265c296ee677fa24455c73cf1b 518 SUPERFAMILY SSF56317 224 489 1.57E-44 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C3Y93_00870 450bc9a8b5c4571a289e71053cdb79e9 464 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 462 30.718 T 14-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 C3Y93_00870 450bc9a8b5c4571a289e71053cdb79e9 464 SUPERFAMILY SSF48452 284 443 1.52E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_00870 450bc9a8b5c4571a289e71053cdb79e9 464 Gene3D G3DSA:1.25.40.10 231 458 3.2E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_00870 450bc9a8b5c4571a289e71053cdb79e9 464 Gene3D G3DSA:3.30.2010.10 47 132 1.9E-8 T 14-10-2018 C3Y93_00870 450bc9a8b5c4571a289e71053cdb79e9 464 Pfam PF01435 Peptidase family M48 56 240 2.3E-33 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 451 556 1.1E-23 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 Pfam PF01433 Peptidase family M1 domain 215 445 1.9E-55 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 Gene3D G3DSA:1.10.390.10 288 450 8.0E-59 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 SUPERFAMILY SSF63737 13 200 9.29E-37 T 14-10-2018 C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 Gene3D G3DSA:1.25.50.10 558 868 1.1E-69 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 Gene3D G3DSA:2.60.40.1730 22 201 1.8E-64 T 14-10-2018 C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 6.1E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 316 6.1E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 320 332 6.1E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 265 275 6.1E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 19 866 2.1E-301 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 Gene3D G3DSA:1.10.1740.60 202 286 1.0E-37 T 14-10-2018 C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 Gene3D G3DSA:2.60.40.1840 451 557 1.1E-24 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 SUPERFAMILY SSF55486 212 457 1.1E-72 T 14-10-2018 C3Y93_03650 70a1002a18a4bd785f0136f30b968c63 869 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 561 867 2.9E-72 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal C3Y93_03715 a6197d06496656d36d9df76e2ae8d47b 242 Pfam PF00899 ThiF family 4 236 1.0E-60 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 C3Y93_03715 a6197d06496656d36d9df76e2ae8d47b 242 Gene3D G3DSA:3.40.50.720 1 242 7.7E-81 T 14-10-2018 C3Y93_03715 a6197d06496656d36d9df76e2ae8d47b 242 SUPERFAMILY SSF69572 2 240 4.32E-79 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 C3Y93_06150 5e44153e0a0a5977346f629c2803ec79 372 Gene3D G3DSA:3.50.50.60 4 347 6.7E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_06150 5e44153e0a0a5977346f629c2803ec79 372 SUPERFAMILY SSF51905 1 365 1.94E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_06150 5e44153e0a0a5977346f629c2803ec79 372 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 3 351 5.1E-77 T 14-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 C3Y93_06150 5e44153e0a0a5977346f629c2803ec79 372 SUPERFAMILY SSF54373 221 306 5.62E-21 T 14-10-2018 C3Y93_06150 5e44153e0a0a5977346f629c2803ec79 372 Pfam PF01266 FAD dependent oxidoreductase 2 346 6.5E-63 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 C3Y93_06150 5e44153e0a0a5977346f629c2803ec79 372 Gene3D G3DSA:3.30.9.10 88 307 6.7E-82 T 14-10-2018 C3Y93_09995 a28f77736b2810b5a1c7bb8ac4c7a1ef 460 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 292 366 7.6E-9 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C3Y93_10360 e6f0b0b60a0cd03c3417a545cad38196 140 Pfam PF07681 DoxX 23 100 1.7E-15 T 14-10-2018 IPR032808 DoxX family C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 Pfam PF03477 ATP cone domain 12 109 3.2E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 Pfam PF03477 ATP cone domain 123 201 1.1E-4 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 SUPERFAMILY SSF48168 128 336 6.93E-57 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 Gene3D G3DSA:3.20.70.20 223 882 1.1E-245 T 14-10-2018 C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 SUPERFAMILY SSF51998 337 874 3.66E-181 T 14-10-2018 C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 264 874 4.9E-211 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 716 738 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 Pfam PF02867 Ribonucleotide reductase, barrel domain 338 872 5.4E-183 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 PRINTS PR01183 Ribonucleotide reductase large chain signature 547 558 9.6E-47 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 PRINTS PR01183 Ribonucleotide reductase large chain signature 413 432 9.6E-47 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 PRINTS PR01183 Ribonucleotide reductase large chain signature 584 607 9.6E-47 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 PRINTS PR01183 Ribonucleotide reductase large chain signature 650 673 9.6E-47 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 PRINTS PR01183 Ribonucleotide reductase large chain signature 727 754 9.6E-47 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 PRINTS PR01183 Ribonucleotide reductase large chain signature 622 644 9.6E-47 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3Y93_12900 0f330351e49ced77d94d4c5412cfbc79 940 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 261 332 1.5E-19 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3Y93_00080 3a36b5a2c661961cbecba68f689ae145 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 120 1.2E-26 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 C3Y93_00080 3a36b5a2c661961cbecba68f689ae145 135 Gene3D G3DSA:3.10.129.10 1 129 5.7E-39 T 14-10-2018 C3Y93_00080 3a36b5a2c661961cbecba68f689ae145 135 SUPERFAMILY SSF54637 2 128 2.05E-35 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_00080 3a36b5a2c661961cbecba68f689ae145 135 PIRSF PIRSF003230 1 135 3.2E-51 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 C3Y93_00080 3a36b5a2c661961cbecba68f689ae145 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 5 126 1.0E-46 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 C3Y93_00080 3a36b5a2c661961cbecba68f689ae145 135 Pfam PF03061 Thioesterase superfamily 19 101 5.6E-15 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 C3Y93_11530 eba0b90f71464f8bfad9a93380f58355 291 Gene3D G3DSA:3.55.30.10 1 175 1.8E-51 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 C3Y93_11530 eba0b90f71464f8bfad9a93380f58355 291 Pfam PF01430 Hsp33 protein 5 278 9.1E-74 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 C3Y93_11530 eba0b90f71464f8bfad9a93380f58355 291 Gene3D G3DSA:1.10.287.480 182 230 1.8E-17 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily C3Y93_11530 eba0b90f71464f8bfad9a93380f58355 291 SUPERFAMILY SSF64397 3 237 1.57E-61 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 C3Y93_11530 eba0b90f71464f8bfad9a93380f58355 291 Gene3D G3DSA:3.90.1280.10 231 288 6.5E-17 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 C3Y93_11530 eba0b90f71464f8bfad9a93380f58355 291 PIRSF PIRSF005261 1 289 1.3E-65 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 C3Y93_11530 eba0b90f71464f8bfad9a93380f58355 291 SUPERFAMILY SSF118352 231 287 1.57E-14 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 C3Y93_03625 3abff28ce8ac33f1ae6856e5065b34b4 323 Pfam PF07859 alpha/beta hydrolase fold 72 283 2.3E-26 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 C3Y93_03625 3abff28ce8ac33f1ae6856e5065b34b4 323 SUPERFAMILY SSF53474 39 313 4.12E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_03625 3abff28ce8ac33f1ae6856e5065b34b4 323 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 72 87 - T 14-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 C3Y93_03625 3abff28ce8ac33f1ae6856e5065b34b4 323 Gene3D G3DSA:3.40.50.1820 11 320 1.6E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_03625 3abff28ce8ac33f1ae6856e5065b34b4 323 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 143 155 - T 14-10-2018 IPR033140 Lipase, GDXG, putative serine active site C3Y93_09250 304af06f19f2bd41f7dfe7259be80cca 292 Pfam PF04055 Radical SAM superfamily 14 163 3.0E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3Y93_09250 304af06f19f2bd41f7dfe7259be80cca 292 SUPERFAMILY SSF102114 9 249 5.36E-28 T 14-10-2018 C3Y93_09250 304af06f19f2bd41f7dfe7259be80cca 292 Gene3D G3DSA:3.20.20.70 7 278 2.1E-32 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_09250 304af06f19f2bd41f7dfe7259be80cca 292 Pfam PF13353 4Fe-4S single cluster domain 12 114 6.2E-6 T 14-10-2018 C3Y93_09250 304af06f19f2bd41f7dfe7259be80cca 292 SMART SM00729 8 220 0.0031 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3Y93_07965 66145fa68ffb9743ab06be658fac6b5a 454 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 423 1.8E-85 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 C3Y93_07965 66145fa68ffb9743ab06be658fac6b5a 454 Pfam PF01554 MatE 23 182 4.3E-28 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 C3Y93_07965 66145fa68ffb9743ab06be658fac6b5a 454 Pfam PF01554 MatE 249 408 1.1E-30 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 C3Y93_07965 66145fa68ffb9743ab06be658fac6b5a 454 PIRSF PIRSF006603 8 452 7.5E-63 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 C3Y93_01975 f0eca8ba0a0a6f7cf54be8bea951df8d 227 Gene3D G3DSA:1.10.10.10 176 223 5.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_01975 f0eca8ba0a0a6f7cf54be8bea951df8d 227 Hamap MF_01114 Regulatory protein RecX [recX]. 82 227 12.824 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 C3Y93_01975 f0eca8ba0a0a6f7cf54be8bea951df8d 227 Pfam PF02631 RecX family 114 224 3.0E-27 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 C3Y93_01975 f0eca8ba0a0a6f7cf54be8bea951df8d 227 Gene3D G3DSA:1.10.10.10 132 175 7.7E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_11515 b5e2ec4ebe2dc07828b7ce2c6e506753 111 Pfam PF13591 MerR HTH family regulatory protein 26 107 1.0E-14 T 14-10-2018 C3Y93_11515 b5e2ec4ebe2dc07828b7ce2c6e506753 111 Gene3D G3DSA:1.10.1660.10 19 111 8.6E-20 T 14-10-2018 C3Y93_01645 cd32867def5ebbf9dcc5321917f27e7e 210 Pfam PF02527 rRNA small subunit methyltransferase G 25 204 3.7E-50 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 C3Y93_01645 cd32867def5ebbf9dcc5321917f27e7e 210 PIRSF PIRSF003078 1 210 6.4E-51 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 C3Y93_01645 cd32867def5ebbf9dcc5321917f27e7e 210 Gene3D G3DSA:3.40.50.150 4 209 6.7E-62 T 14-10-2018 C3Y93_01645 cd32867def5ebbf9dcc5321917f27e7e 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 206 26.522 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 C3Y93_01645 cd32867def5ebbf9dcc5321917f27e7e 210 SUPERFAMILY SSF53335 7 209 1.38E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_01645 cd32867def5ebbf9dcc5321917f27e7e 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 28 208 2.9E-48 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 C3Y93_06440 176a97bc9eae9f7689b69c4fe47c7118 221 Pfam PF00814 Glycoprotease family 33 141 1.5E-24 T 14-10-2018 IPR000905 Gcp-like domain C3Y93_06440 176a97bc9eae9f7689b69c4fe47c7118 221 Gene3D G3DSA:3.30.420.40 3 208 2.6E-55 T 14-10-2018 C3Y93_06440 176a97bc9eae9f7689b69c4fe47c7118 221 SUPERFAMILY SSF53067 1 103 3.88E-23 T 14-10-2018 C3Y93_06440 176a97bc9eae9f7689b69c4fe47c7118 221 Gene3D G3DSA:3.30.420.40 95 177 2.6E-55 T 14-10-2018 C3Y93_06440 176a97bc9eae9f7689b69c4fe47c7118 221 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 208 6.1E-49 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 C3Y93_06440 176a97bc9eae9f7689b69c4fe47c7118 221 SUPERFAMILY SSF53067 111 206 2.46E-14 T 14-10-2018 C3Y93_05405 cda8b7ca06327a9bad759d27ab24b6e3 554 Pfam PF02652 L-lactate permease 18 545 1.5E-213 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 C3Y93_05405 cda8b7ca06327a9bad759d27ab24b6e3 554 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 7 547 4.1E-223 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 C3Y93_03530 bc6aa36e7b988ffc7bf5d254824f7a28 388 SUPERFAMILY SSF51197 4 295 6.59E-62 T 14-10-2018 C3Y93_03530 bc6aa36e7b988ffc7bf5d254824f7a28 388 SMART SM00558 90 228 1.1E-5 T 14-10-2018 IPR003347 JmjC domain C3Y93_03530 bc6aa36e7b988ffc7bf5d254824f7a28 388 Pfam PF08007 Cupin superfamily protein 14 311 8.3E-88 T 14-10-2018 IPR003347 JmjC domain C3Y93_03530 bc6aa36e7b988ffc7bf5d254824f7a28 388 Gene3D G3DSA:2.60.120.650 1 213 2.6E-74 T 14-10-2018 C3Y93_03530 bc6aa36e7b988ffc7bf5d254824f7a28 388 Gene3D G3DSA:1.10.10.2510 214 382 2.9E-12 T 14-10-2018 C3Y93_06845 0f37791fe03728210c34c5bfa70e10cf 427 SUPERFAMILY SSF53756 47 415 4.71E-74 T 14-10-2018 C3Y93_06845 0f37791fe03728210c34c5bfa70e10cf 427 Pfam PF13439 Glycosyltransferase Family 4 59 226 1.1E-25 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3Y93_06845 0f37791fe03728210c34c5bfa70e10cf 427 Pfam PF00534 Glycosyl transferases group 1 237 398 1.1E-35 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3Y93_06845 0f37791fe03728210c34c5bfa70e10cf 427 Gene3D G3DSA:3.40.50.2000 224 399 3.5E-66 T 14-10-2018 C3Y93_06845 0f37791fe03728210c34c5bfa70e10cf 427 Gene3D G3DSA:3.40.50.2000 50 223 3.5E-66 T 14-10-2018 C3Y93_10690 da17df0574d5c94a5eb9bc1959c89d3b 790 Pfam PF11842 Domain of unknown function (DUF3362) 631 771 5.6E-61 T 14-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal C3Y93_10690 da17df0574d5c94a5eb9bc1959c89d3b 790 Pfam PF08497 Radical SAM N-terminal 30 416 7.5E-141 T 14-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal C3Y93_10690 da17df0574d5c94a5eb9bc1959c89d3b 790 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 30 683 48.811 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 C3Y93_10690 da17df0574d5c94a5eb9bc1959c89d3b 790 Gene3D G3DSA:3.80.30.20 413 678 2.2E-15 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C3Y93_10690 da17df0574d5c94a5eb9bc1959c89d3b 790 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 30 681 2.1E-256 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 C3Y93_10690 da17df0574d5c94a5eb9bc1959c89d3b 790 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 417 437 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 C3Y93_10690 da17df0574d5c94a5eb9bc1959c89d3b 790 Pfam PF04055 Radical SAM superfamily 417 622 1.5E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3Y93_10690 da17df0574d5c94a5eb9bc1959c89d3b 790 SMART SM00729 413 663 3.8E-8 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3Y93_10690 da17df0574d5c94a5eb9bc1959c89d3b 790 SUPERFAMILY SSF102114 416 668 4.19E-11 T 14-10-2018 C3Y93_01990 ade08d0856bf3f1c978ffcc0124fcc75 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 180 2.2E-16 T 14-10-2018 C3Y93_01990 ade08d0856bf3f1c978ffcc0124fcc75 224 Gene3D G3DSA:3.40.50.1000 1 189 2.7E-28 T 14-10-2018 IPR023214 HAD superfamily C3Y93_01990 ade08d0856bf3f1c978ffcc0124fcc75 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 180 2.8E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3Y93_01990 ade08d0856bf3f1c978ffcc0124fcc75 224 SUPERFAMILY SSF56784 2 210 4.54E-37 T 14-10-2018 IPR036412 HAD-like superfamily C3Y93_13880 998301ef236a9db91e7eed42890bc2c6 328 Pfam PF04280 Tim44-like domain 211 326 2.1E-10 T 14-10-2018 IPR007379 Tim44-like domain C3Y93_13880 998301ef236a9db91e7eed42890bc2c6 328 SUPERFAMILY SSF54427 212 327 7.45E-7 T 14-10-2018 IPR032710 NTF2-like domain superfamily C3Y93_13880 998301ef236a9db91e7eed42890bc2c6 328 SMART SM00978 196 326 4.4E-27 T 14-10-2018 IPR007379 Tim44-like domain C3Y93_03600 87e3f83ccef634582a477d2045ed6cf0 143 Pfam PF05232 Chlorhexidine efflux transporter 5 64 7.5E-16 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter C3Y93_03600 87e3f83ccef634582a477d2045ed6cf0 143 Pfam PF05232 Chlorhexidine efflux transporter 70 132 1.1E-20 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter C3Y93_10135 c1835b386e9a571c289b986e31d78521 215 SUPERFAMILY SSF55961 27 197 1.77E-35 T 14-10-2018 C3Y93_10135 c1835b386e9a571c289b986e31d78521 215 Pfam PF01852 START domain 37 195 4.7E-6 T 14-10-2018 IPR002913 START domain GO:0008289 C3Y93_10135 c1835b386e9a571c289b986e31d78521 215 Gene3D G3DSA:3.30.530.20 26 207 1.8E-46 T 14-10-2018 IPR023393 START-like domain superfamily C3Y93_10135 c1835b386e9a571c289b986e31d78521 215 PIRSF PIRSF039033 1 213 1.3E-41 T 14-10-2018 IPR028347 START domain-containing protein C3Y93_10025 a66feebcf86d020aea7e8bf1f7b1d6ad 894 SUPERFAMILY SSF51621 6 894 8.16E-303 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C3Y93_10025 a66feebcf86d020aea7e8bf1f7b1d6ad 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 191 207 5.9E-68 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3Y93_10025 a66feebcf86d020aea7e8bf1f7b1d6ad 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 587 616 5.9E-68 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3Y93_10025 a66feebcf86d020aea7e8bf1f7b1d6ad 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 250 265 5.9E-68 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3Y93_10025 a66feebcf86d020aea7e8bf1f7b1d6ad 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 389 409 5.9E-68 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3Y93_10025 a66feebcf86d020aea7e8bf1f7b1d6ad 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 545 565 5.9E-68 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3Y93_10025 a66feebcf86d020aea7e8bf1f7b1d6ad 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 138 151 5.9E-68 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3Y93_10025 a66feebcf86d020aea7e8bf1f7b1d6ad 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 719 745 5.9E-68 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3Y93_10025 a66feebcf86d020aea7e8bf1f7b1d6ad 894 Pfam PF00311 Phosphoenolpyruvate carboxylase 133 894 1.0E-278 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3Y93_10025 a66feebcf86d020aea7e8bf1f7b1d6ad 894 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 547 559 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3Y93_10025 a66feebcf86d020aea7e8bf1f7b1d6ad 894 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 139 150 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3Y93_10025 a66feebcf86d020aea7e8bf1f7b1d6ad 894 Gene3D G3DSA:1.20.1440.90 307 392 3.4E-23 T 14-10-2018 C3Y93_10025 a66feebcf86d020aea7e8bf1f7b1d6ad 894 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 2 894 18.41 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 C3Y93_08875 e0c03324120b6591c3a3ea8b17d0c964 234 Gene3D G3DSA:3.30.420.10 67 210 3.0E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_08875 e0c03324120b6591c3a3ea8b17d0c964 234 Pfam PF13610 DDE domain 74 212 9.8E-50 T 14-10-2018 IPR032874 DDE domain C3Y93_08875 e0c03324120b6591c3a3ea8b17d0c964 234 SUPERFAMILY SSF53098 72 191 1.54E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_08905 e0c03324120b6591c3a3ea8b17d0c964 234 Gene3D G3DSA:3.30.420.10 67 210 3.0E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_08905 e0c03324120b6591c3a3ea8b17d0c964 234 Pfam PF13610 DDE domain 74 212 9.8E-50 T 14-10-2018 IPR032874 DDE domain C3Y93_08905 e0c03324120b6591c3a3ea8b17d0c964 234 SUPERFAMILY SSF53098 72 191 1.54E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_06415 cd533f440dd6c6ce4b043171646c3e98 367 Pfam PF05987 Bacterial protein of unknown function (DUF898) 37 360 2.0E-87 T 14-10-2018 IPR010295 Protein of unknown function DUF898 C3Y93_02605 34aab0d67da62421ec13c2955dd00c8e 103 PIRSF PIRSF006223 1 103 1.7E-21 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE C3Y93_02605 34aab0d67da62421ec13c2955dd00c8e 103 Pfam PF04358 DsrC like protein 2 103 1.4E-27 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE C3Y93_02605 34aab0d67da62421ec13c2955dd00c8e 103 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 103 1.9E-26 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE C3Y93_02605 34aab0d67da62421ec13c2955dd00c8e 103 Gene3D G3DSA:1.10.10.370 33 103 1.4E-18 T 14-10-2018 C3Y93_02605 34aab0d67da62421ec13c2955dd00c8e 103 Gene3D G3DSA:3.30.1420.10 1 30 2.9E-7 T 14-10-2018 C3Y93_02605 34aab0d67da62421ec13c2955dd00c8e 103 SUPERFAMILY SSF69721 2 103 6.67E-29 T 14-10-2018 IPR025526 DsrC-like domain superfamily C3Y93_10895 4e73354e1006f3e53d147d44f5d532fb 211 SMART SM00421 146 203 8.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_10895 4e73354e1006f3e53d147d44f5d532fb 211 Gene3D G3DSA:3.40.50.12740 2 209 1.2E-61 T 14-10-2018 C3Y93_10895 4e73354e1006f3e53d147d44f5d532fb 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_10895 4e73354e1006f3e53d147d44f5d532fb 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_10895 4e73354e1006f3e53d147d44f5d532fb 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_10895 4e73354e1006f3e53d147d44f5d532fb 211 SUPERFAMILY SSF52172 2 132 1.71E-34 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_10895 4e73354e1006f3e53d147d44f5d532fb 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_10895 4e73354e1006f3e53d147d44f5d532fb 211 SUPERFAMILY SSF46894 137 209 5.44E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3Y93_10895 4e73354e1006f3e53d147d44f5d532fb 211 SMART SM00448 2 115 4.3E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_10895 4e73354e1006f3e53d147d44f5d532fb 211 Pfam PF00072 Response regulator receiver domain 4 115 2.1E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_10895 4e73354e1006f3e53d147d44f5d532fb 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 203 3.5E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_01775 f33fb666ae551c4287094176c391d644 301 Pfam PF03956 Lysine exporter LysO 117 298 4.8E-49 T 14-10-2018 IPR005642 Lysine exporter LysO C3Y93_01775 f33fb666ae551c4287094176c391d644 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 138 298 4.0E-53 T 14-10-2018 IPR005642 Lysine exporter LysO C3Y93_03285 0ad2914451080d2fc5b0024e2dd61eef 364 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3Y93_03285 0ad2914451080d2fc5b0024e2dd61eef 364 Gene3D G3DSA:3.60.150.10 1 363 2.9E-159 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3Y93_03285 0ad2914451080d2fc5b0024e2dd61eef 364 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 35.907 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3Y93_03285 0ad2914451080d2fc5b0024e2dd61eef 364 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 2.1E-133 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3Y93_03285 0ad2914451080d2fc5b0024e2dd61eef 364 SUPERFAMILY SSF103263 4 351 3.92E-142 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3Y93_03285 0ad2914451080d2fc5b0024e2dd61eef 364 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3Y93_03285 0ad2914451080d2fc5b0024e2dd61eef 364 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3Y93_03285 0ad2914451080d2fc5b0024e2dd61eef 364 Pfam PF01264 Chorismate synthase 10 345 1.6E-135 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3Y93_03285 0ad2914451080d2fc5b0024e2dd61eef 364 PIRSF PIRSF001456 3 359 1.4E-133 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 PRINTS PR01035 Tetracycline resistance protein signature 101 122 5.9E-110 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 PRINTS PR01035 Tetracycline resistance protein signature 131 153 5.9E-110 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 PRINTS PR01035 Tetracycline resistance protein signature 74 98 5.9E-110 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 PRINTS PR01035 Tetracycline resistance protein signature 217 234 5.9E-110 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 PRINTS PR01035 Tetracycline resistance protein signature 364 383 5.9E-110 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 PRINTS PR01035 Tetracycline resistance protein signature 299 319 5.9E-110 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 PRINTS PR01035 Tetracycline resistance protein signature 14 30 5.9E-110 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 PRINTS PR01035 Tetracycline resistance protein signature 43 62 5.9E-110 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 PRINTS PR01035 Tetracycline resistance protein signature 159 179 5.9E-110 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 PRINTS PR01035 Tetracycline resistance protein signature 246 266 5.9E-110 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 PRINTS PR01035 Tetracycline resistance protein signature 334 357 5.9E-110 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 PRINTS PR01035 Tetracycline resistance protein signature 274 295 5.9E-110 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 Gene3D G3DSA:1.20.1250.20 1 387 3.7E-71 T 14-10-2018 C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 SUPERFAMILY SSF103473 3 387 5.23E-67 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_08755 449edf4a310c74f55b942a58e6906c74 395 Pfam PF07690 Major Facilitator Superfamily 8 252 2.2E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_10800 2b398c4daa673d2e7c47bc72010b7cf7 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 314 327 5.7E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 C3Y93_10800 2b398c4daa673d2e7c47bc72010b7cf7 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 338 350 5.7E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 C3Y93_10800 2b398c4daa673d2e7c47bc72010b7cf7 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 5.7E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 C3Y93_10800 2b398c4daa673d2e7c47bc72010b7cf7 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 286 300 5.7E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 C3Y93_10800 2b398c4daa673d2e7c47bc72010b7cf7 495 SUPERFAMILY SSF52540 189 493 1.6E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_10800 2b398c4daa673d2e7c47bc72010b7cf7 495 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.4E-43 T 14-10-2018 C3Y93_10800 2b398c4daa673d2e7c47bc72010b7cf7 495 Gene3D G3DSA:3.40.50.300 167 494 7.9E-56 T 14-10-2018 C3Y93_10800 2b398c4daa673d2e7c47bc72010b7cf7 495 SMART SM00382 210 389 2.9E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_10800 2b398c4daa673d2e7c47bc72010b7cf7 495 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 491 2.8E-28 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain C3Y93_10800 2b398c4daa673d2e7c47bc72010b7cf7 495 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 491 3.8E-188 T 14-10-2018 IPR004482 Mg chelatase-related protein C3Y93_10800 2b398c4daa673d2e7c47bc72010b7cf7 495 SUPERFAMILY SSF54211 11 167 4.55E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_10800 2b398c4daa673d2e7c47bc72010b7cf7 495 Gene3D G3DSA:3.30.230.10 15 166 7.3E-10 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C3Y93_10800 2b398c4daa673d2e7c47bc72010b7cf7 495 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 392 1.9E-94 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain C3Y93_08785 20cdcce9212c3621488d52bc509e691c 98 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 95 5.3E-36 T 14-10-2018 IPR014056 Addiction module killer protein, predicted C3Y93_08785 20cdcce9212c3621488d52bc509e691c 98 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 92 7.0E-7 T 14-10-2018 IPR009241 Toxin HigB-like C3Y93_08785 20cdcce9212c3621488d52bc509e691c 98 PIRSF PIRSF028744 1 98 1.2E-36 T 14-10-2018 IPR014056 Addiction module killer protein, predicted C3Y93_07485 d39f944ad4e7a78a64b2e786bb04a7f7 386 PIRSF PIRSF000443 2 381 2.7E-132 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 C3Y93_07485 d39f944ad4e7a78a64b2e786bb04a7f7 386 SUPERFAMILY SSF53474 11 373 3.42E-101 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_07485 d39f944ad4e7a78a64b2e786bb04a7f7 386 Gene3D G3DSA:1.10.1740.110 186 291 3.2E-139 T 14-10-2018 C3Y93_07485 d39f944ad4e7a78a64b2e786bb04a7f7 386 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 13 373 28.765 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 C3Y93_07485 d39f944ad4e7a78a64b2e786bb04a7f7 386 Pfam PF00561 alpha/beta hydrolase fold 49 358 2.4E-33 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_07485 d39f944ad4e7a78a64b2e786bb04a7f7 386 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 19 372 4.1E-139 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 C3Y93_07485 d39f944ad4e7a78a64b2e786bb04a7f7 386 Gene3D G3DSA:3.40.50.1820 24 359 3.2E-139 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_02560 1e68f7cbea0136daee0df553ba6d356e 305 Gene3D G3DSA:3.40.190.10 109 298 2.1E-32 T 14-10-2018 C3Y93_02560 1e68f7cbea0136daee0df553ba6d356e 305 Gene3D G3DSA:3.40.190.10 182 275 2.1E-32 T 14-10-2018 C3Y93_02560 1e68f7cbea0136daee0df553ba6d356e 305 Pfam PF03466 LysR substrate binding domain 109 290 9.0E-9 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_02560 1e68f7cbea0136daee0df553ba6d356e 305 SUPERFAMILY SSF53850 109 303 5.97E-23 T 14-10-2018 C3Y93_02560 1e68f7cbea0136daee0df553ba6d356e 305 SUPERFAMILY SSF46785 15 94 3.27E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_02560 1e68f7cbea0136daee0df553ba6d356e 305 Gene3D G3DSA:1.10.10.10 11 100 2.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_02560 1e68f7cbea0136daee0df553ba6d356e 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 79 1.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_06640 558a60b8750a31fa4bd2fc1a063e3573 108 SUPERFAMILY SSF52833 3 107 4.05E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_06640 558a60b8750a31fa4bd2fc1a063e3573 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-7 T 14-10-2018 C3Y93_06640 558a60b8750a31fa4bd2fc1a063e3573 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-7 T 14-10-2018 C3Y93_06640 558a60b8750a31fa4bd2fc1a063e3573 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-7 T 14-10-2018 C3Y93_06640 558a60b8750a31fa4bd2fc1a063e3573 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3Y93_06640 558a60b8750a31fa4bd2fc1a063e3573 108 Pfam PF00085 Thioredoxin 5 106 1.4E-34 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C3Y93_06640 558a60b8750a31fa4bd2fc1a063e3573 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.1E-36 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C3Y93_06640 558a60b8750a31fa4bd2fc1a063e3573 108 PIRSF PIRSF000077 2 108 5.3E-40 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C3Y93_06640 558a60b8750a31fa4bd2fc1a063e3573 108 Gene3D G3DSA:3.40.30.10 1 108 1.8E-34 T 14-10-2018 C3Y93_09235 fa1bfc25d99ddaf6718af11a7ee84878 367 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 12 148 9.2E-42 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_09235 fa1bfc25d99ddaf6718af11a7ee84878 367 Gene3D G3DSA:3.40.50.2000 187 349 7.1E-49 T 14-10-2018 C3Y93_09235 fa1bfc25d99ddaf6718af11a7ee84878 367 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 12 366 35.29 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_09235 fa1bfc25d99ddaf6718af11a7ee84878 367 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 195 356 1.9E-40 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 C3Y93_09235 fa1bfc25d99ddaf6718af11a7ee84878 367 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 6 362 4.4E-106 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_09235 fa1bfc25d99ddaf6718af11a7ee84878 367 Gene3D G3DSA:3.40.50.2000 9 186 2.6E-60 T 14-10-2018 C3Y93_09235 fa1bfc25d99ddaf6718af11a7ee84878 367 SUPERFAMILY SSF53756 10 365 6.28E-114 T 14-10-2018 C3Y93_07045 7e0afd737012cbd36ff982074c7394bf 189 SUPERFAMILY SSF51161 17 176 2.69E-27 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3Y93_07045 7e0afd737012cbd36ff982074c7394bf 189 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 4.8E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_07045 7e0afd737012cbd36ff982074c7394bf 189 Gene3D G3DSA:2.160.10.10 1 172 8.9E-44 T 14-10-2018 C3Y93_02250 6bc3b66ff9c1bc551963d2d5286f65a3 546 Gene3D G3DSA:3.30.830.10 67 281 4.3E-39 T 14-10-2018 C3Y93_02250 6bc3b66ff9c1bc551963d2d5286f65a3 546 SUPERFAMILY SSF63411 298 477 3.5E-39 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3Y93_02250 6bc3b66ff9c1bc551963d2d5286f65a3 546 Pfam PF00675 Insulinase (Peptidase family M16) 78 228 4.7E-14 T 14-10-2018 IPR011765 Peptidase M16, N-terminal C3Y93_02250 6bc3b66ff9c1bc551963d2d5286f65a3 546 SUPERFAMILY SSF63411 61 272 4.71E-34 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3Y93_02250 6bc3b66ff9c1bc551963d2d5286f65a3 546 Gene3D G3DSA:3.30.830.10 285 480 3.6E-48 T 14-10-2018 C3Y93_02250 6bc3b66ff9c1bc551963d2d5286f65a3 546 Pfam PF05193 Peptidase M16 inactive domain 235 410 1.4E-25 T 14-10-2018 IPR007863 Peptidase M16, C-terminal C3Y93_07785 2b6cc2d07442cdd7d7665c48cd2c44a2 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 11 196 2.5E-71 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07785 2b6cc2d07442cdd7d7665c48cd2c44a2 200 Pfam PF00573 Ribosomal protein L4/L1 family 11 196 9.8E-62 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 C3Y93_07785 2b6cc2d07442cdd7d7665c48cd2c44a2 200 Gene3D G3DSA:3.40.1370.10 4 199 7.5E-65 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 C3Y93_07785 2b6cc2d07442cdd7d7665c48cd2c44a2 200 SUPERFAMILY SSF52166 7 196 2.35E-68 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 C3Y93_07785 2b6cc2d07442cdd7d7665c48cd2c44a2 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 2 200 32.709 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07355 b17d7479d5d46ec656196d187cfa69da 367 Gene3D G3DSA:3.20.20.300 1 332 1.7E-112 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 C3Y93_07355 b17d7479d5d46ec656196d187cfa69da 367 SUPERFAMILY SSF51445 3 293 1.05E-78 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C3Y93_07355 b17d7479d5d46ec656196d187cfa69da 367 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 4 341 47.898 T 14-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 C3Y93_07355 b17d7479d5d46ec656196d187cfa69da 367 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 C3Y93_07355 b17d7479d5d46ec656196d187cfa69da 367 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 300 2.4E-75 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 C3Y93_03560 ae8e7c74bc37ed140eed6744497e076e 169 Gene3D G3DSA:3.40.50.2300 1 167 3.6E-50 T 14-10-2018 C3Y93_03560 ae8e7c74bc37ed140eed6744497e076e 169 SUPERFAMILY SSF52788 5 161 2.35E-45 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily C3Y93_03560 ae8e7c74bc37ed140eed6744497e076e 169 SMART SM00226 7 160 2.2E-41 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I C3Y93_03560 ae8e7c74bc37ed140eed6744497e076e 169 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 50 66 1.2E-19 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C3Y93_03560 ae8e7c74bc37ed140eed6744497e076e 169 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 84 99 1.2E-19 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C3Y93_03560 ae8e7c74bc37ed140eed6744497e076e 169 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 9 26 1.2E-19 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C3Y93_03560 ae8e7c74bc37ed140eed6744497e076e 169 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 132 147 1.2E-19 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C3Y93_03560 ae8e7c74bc37ed140eed6744497e076e 169 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 9 158 1.0E-34 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I C3Y93_08770 69b15640c6832ffe6333babc3277c259 104 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 40 96 7.4E-19 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system C3Y93_02110 de2ac800141f1477d9553c7e9950be55 405 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 396 53.273 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 C3Y93_02110 de2ac800141f1477d9553c7e9950be55 405 Gene3D G3DSA:3.90.1150.10 5 377 9.9E-157 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_02110 de2ac800141f1477d9553c7e9950be55 405 Pfam PF00266 Aminotransferase class-V 5 369 1.2E-81 T 14-10-2018 IPR000192 Aminotransferase class V domain C3Y93_02110 de2ac800141f1477d9553c7e9950be55 405 Gene3D G3DSA:3.40.640.10 16 263 9.9E-157 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_02110 de2ac800141f1477d9553c7e9950be55 405 PIRSF PIRSF005572 2 385 5.7E-128 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 C3Y93_02110 de2ac800141f1477d9553c7e9950be55 405 SUPERFAMILY SSF53383 3 392 2.99E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_02110 de2ac800141f1477d9553c7e9950be55 405 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 405 4.2E-209 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 C3Y93_02110 de2ac800141f1477d9553c7e9950be55 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site C3Y93_00560 c187e47557b5f884fbe943bed3e2d398 440 PIRSF PIRSF005353 2 439 8.8E-186 T 14-10-2018 IPR026033 Purine permease PbuG-like C3Y93_00560 c187e47557b5f884fbe943bed3e2d398 440 Pfam PF00860 Permease family 27 399 1.1E-53 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 C3Y93_07840 58c87f2c4a3dde6ae6cbb1dbbe402e8d 290 SUPERFAMILY SSF54637 115 283 5.6E-45 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_07840 58c87f2c4a3dde6ae6cbb1dbbe402e8d 290 Gene3D G3DSA:3.10.129.90 2 287 1.1E-90 T 14-10-2018 C3Y93_07840 58c87f2c4a3dde6ae6cbb1dbbe402e8d 290 Pfam PF13622 Thioesterase-like superfamily 33 282 2.3E-51 T 14-10-2018 C3Y93_07840 58c87f2c4a3dde6ae6cbb1dbbe402e8d 290 SUPERFAMILY SSF54637 5 112 3.61E-36 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_08235 f960e87081f9f2cff1e9e4c5e48cbab4 196 Pfam PF04011 LemA family 12 195 1.4E-66 T 14-10-2018 IPR007156 LemA C3Y93_08235 f960e87081f9f2cff1e9e4c5e48cbab4 196 SUPERFAMILY SSF140478 27 184 3.01E-52 T 14-10-2018 IPR023353 LemA-like domain superfamily C3Y93_08235 f960e87081f9f2cff1e9e4c5e48cbab4 196 Gene3D G3DSA:1.20.1440.20 18 195 9.0E-64 T 14-10-2018 IPR023353 LemA-like domain superfamily C3Y93_08240 7126811b286240711fc10ca94bb884f9 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 460 1.3E-25 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3Y93_08240 7126811b286240711fc10ca94bb884f9 473 PRINTS PR00419 Adrenodoxin reductase family signature 216 226 2.1E-34 T 14-10-2018 C3Y93_08240 7126811b286240711fc10ca94bb884f9 473 PRINTS PR00419 Adrenodoxin reductase family signature 151 173 2.1E-34 T 14-10-2018 C3Y93_08240 7126811b286240711fc10ca94bb884f9 473 PRINTS PR00419 Adrenodoxin reductase family signature 174 187 2.1E-34 T 14-10-2018 C3Y93_08240 7126811b286240711fc10ca94bb884f9 473 PRINTS PR00419 Adrenodoxin reductase family signature 326 339 2.1E-34 T 14-10-2018 C3Y93_08240 7126811b286240711fc10ca94bb884f9 473 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 2.1E-34 T 14-10-2018 C3Y93_08240 7126811b286240711fc10ca94bb884f9 473 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 9 472 6.1E-238 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 C3Y93_08240 7126811b286240711fc10ca94bb884f9 473 Gene3D G3DSA:1.10.1060.10 13 148 3.2E-32 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C3Y93_08240 7126811b286240711fc10ca94bb884f9 473 Gene3D G3DSA:3.50.50.60 258 401 2.1E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_08240 7126811b286240711fc10ca94bb884f9 473 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 27 135 3.7E-36 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 C3Y93_08240 7126811b286240711fc10ca94bb884f9 473 SUPERFAMILY SSF46548 10 160 2.2E-38 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C3Y93_08240 7126811b286240711fc10ca94bb884f9 473 SUPERFAMILY SSF51971 148 402 1.41E-69 T 14-10-2018 C3Y93_08240 7126811b286240711fc10ca94bb884f9 473 Gene3D G3DSA:3.40.50.720 149 257 1.1E-18 T 14-10-2018 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 573 23.413 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 Gene3D G3DSA:2.70.98.90 80 372 7.1E-97 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 PRINTS PR01900 YidC translocation/secretion protein signature 526 550 5.7E-24 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 PRINTS PR01900 YidC translocation/secretion protein signature 507 522 5.7E-24 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 PRINTS PR01900 YidC translocation/secretion protein signature 378 394 5.7E-24 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 392 571 8.6E-71 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 Pfam PF02096 60Kd inner membrane protein 393 571 1.2E-60 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 5 391 1.2E-105 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 PRINTS PR00701 60kDa inner membrane protein signature 3 24 2.2E-69 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 PRINTS PR00701 60kDa inner membrane protein signature 363 383 2.2E-69 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 PRINTS PR00701 60kDa inner membrane protein signature 537 560 2.2E-69 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 PRINTS PR00701 60kDa inner membrane protein signature 281 296 2.2E-69 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 PRINTS PR00701 60kDa inner membrane protein signature 501 523 2.2E-69 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 PRINTS PR00701 60kDa inner membrane protein signature 89 110 2.2E-69 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 PRINTS PR00701 60kDa inner membrane protein signature 248 266 2.2E-69 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 PRINTS PR00701 60kDa inner membrane protein signature 454 477 2.2E-69 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C3Y93_09785 d031eae8767d3c2bd1823bc494d10b25 587 Pfam PF14849 YidC periplasmic domain 84 380 1.5E-70 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain C3Y93_10815 a6183c7ff88ca09aefe83f5702066cc2 469 TIGRFAM TIGR00836 amt: ammonium transporter 76 466 3.6E-139 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 C3Y93_10815 a6183c7ff88ca09aefe83f5702066cc2 469 SUPERFAMILY SSF111352 72 450 2.48E-133 T 14-10-2018 C3Y93_10815 a6183c7ff88ca09aefe83f5702066cc2 469 PRINTS PR00342 Rhesus blood group protein signature 352 370 3.2E-7 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 C3Y93_10815 a6183c7ff88ca09aefe83f5702066cc2 469 PRINTS PR00342 Rhesus blood group protein signature 171 187 3.2E-7 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 C3Y93_10815 a6183c7ff88ca09aefe83f5702066cc2 469 PRINTS PR00342 Rhesus blood group protein signature 266 284 3.2E-7 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 C3Y93_10815 a6183c7ff88ca09aefe83f5702066cc2 469 PRINTS PR00342 Rhesus blood group protein signature 297 319 3.2E-7 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 C3Y93_10815 a6183c7ff88ca09aefe83f5702066cc2 469 Gene3D G3DSA:1.10.3430.10 51 469 8.8E-145 T 14-10-2018 IPR029020 Ammonium/urea transporter C3Y93_10815 a6183c7ff88ca09aefe83f5702066cc2 469 ProSitePatterns PS01219 Ammonium transporters signature. 227 252 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 C3Y93_10815 a6183c7ff88ca09aefe83f5702066cc2 469 Pfam PF00909 Ammonium Transporter Family 78 467 5.2E-123 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 C3Y93_05130 c430f61fea7f8e6e8a7945bb7bc61b8a 435 Pfam PF01385 Probable transposase 204 308 5.2E-22 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 C3Y93_05130 c430f61fea7f8e6e8a7945bb7bc61b8a 435 Pfam PF12323 Helix-turn-helix domain 1 47 7.3E-13 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain C3Y93_05130 c430f61fea7f8e6e8a7945bb7bc61b8a 435 Pfam PF07282 Putative transposase DNA-binding domain 337 404 1.5E-22 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C3Y93_05130 c430f61fea7f8e6e8a7945bb7bc61b8a 435 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 277 364 9.7E-9 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C3Y93_01045 4e97da422b4ca4bd02d6259e2a686e5d 95 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 29 63 1.0E-4 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA C3Y93_08680 292535348aae57943abb6397aac9cfed 344 Pfam PF00970 Oxidoreductase FAD-binding domain 109 204 1.4E-21 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 C3Y93_08680 292535348aae57943abb6397aac9cfed 344 SUPERFAMILY SSF63380 108 204 3.06E-23 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3Y93_08680 292535348aae57943abb6397aac9cfed 344 Gene3D G3DSA:2.40.30.10 99 201 2.9E-24 T 14-10-2018 C3Y93_08680 292535348aae57943abb6397aac9cfed 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 198 207 1.1E-23 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_08680 292535348aae57943abb6397aac9cfed 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 238 247 1.1E-23 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_08680 292535348aae57943abb6397aac9cfed 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 1.1E-23 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_08680 292535348aae57943abb6397aac9cfed 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 213 232 1.1E-23 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_08680 292535348aae57943abb6397aac9cfed 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 137 149 1.1E-23 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_08680 292535348aae57943abb6397aac9cfed 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 154 161 1.1E-23 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_08680 292535348aae57943abb6397aac9cfed 344 SUPERFAMILY SSF54292 2 90 2.75E-20 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3Y93_08680 292535348aae57943abb6397aac9cfed 344 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 84 4.0E-15 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C3Y93_08680 292535348aae57943abb6397aac9cfed 344 Gene3D G3DSA:3.40.50.80 202 335 5.2E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_08680 292535348aae57943abb6397aac9cfed 344 SUPERFAMILY SSF52343 206 336 4.19E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_08680 292535348aae57943abb6397aac9cfed 344 Pfam PF00175 Oxidoreductase NAD-binding domain 214 317 3.7E-22 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C3Y93_08680 292535348aae57943abb6397aac9cfed 344 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 C3Y93_08680 292535348aae57943abb6397aac9cfed 344 Gene3D G3DSA:3.10.20.30 1 98 3.0E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3Y93_13635 7147c5778d9af6025e1feddbdef345ab 54 PIRSF PIRSF000071 1 54 1.1E-25 T 14-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 C3Y93_13635 7147c5778d9af6025e1feddbdef345ab 54 Gene3D G3DSA:2.20.28.10 1 54 1.8E-28 T 14-10-2018 C3Y93_13635 7147c5778d9af6025e1feddbdef345ab 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 14-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 C3Y93_13635 7147c5778d9af6025e1feddbdef345ab 54 SUPERFAMILY SSF57802 1 53 5.89E-23 T 14-10-2018 C3Y93_13635 7147c5778d9af6025e1feddbdef345ab 54 PRINTS PR00163 Rubredoxin signature 3 19 8.8E-11 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 C3Y93_13635 7147c5778d9af6025e1feddbdef345ab 54 PRINTS PR00163 Rubredoxin signature 33 49 8.8E-11 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 C3Y93_13635 7147c5778d9af6025e1feddbdef345ab 54 Pfam PF00301 Rubredoxin 3 49 2.8E-24 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 C3Y93_09215 7c62335d306ac25d72aa2419f249f047 420 Gene3D G3DSA:3.90.640.10 236 299 1.5E-83 T 14-10-2018 C3Y93_09215 7c62335d306ac25d72aa2419f249f047 420 PIRSF PIRSF003101 1 420 3.1E-102 T 14-10-2018 IPR020823 Cell division protein FtsA C3Y93_09215 7c62335d306ac25d72aa2419f249f047 420 Pfam PF14450 Cell division protein FtsA 9 179 1.6E-9 T 14-10-2018 C3Y93_09215 7c62335d306ac25d72aa2419f249f047 420 SUPERFAMILY SSF53067 8 198 2.01E-37 T 14-10-2018 C3Y93_09215 7c62335d306ac25d72aa2419f249f047 420 SMART SM00842 8 197 4.7E-61 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 C3Y93_09215 7c62335d306ac25d72aa2419f249f047 420 Pfam PF14450 Cell division protein FtsA 208 377 2.0E-20 T 14-10-2018 C3Y93_09215 7c62335d306ac25d72aa2419f249f047 420 SUPERFAMILY SSF53067 199 359 6.95E-34 T 14-10-2018 C3Y93_09215 7c62335d306ac25d72aa2419f249f047 420 Gene3D G3DSA:3.30.1490.110 83 170 1.5E-83 T 14-10-2018 C3Y93_09215 7c62335d306ac25d72aa2419f249f047 420 Gene3D G3DSA:3.30.420.40 11 375 1.5E-83 T 14-10-2018 C3Y93_09215 7c62335d306ac25d72aa2419f249f047 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 4 420 22.307 T 14-10-2018 IPR020823 Cell division protein FtsA C3Y93_09215 7c62335d306ac25d72aa2419f249f047 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 381 6.0E-91 T 14-10-2018 IPR020823 Cell division protein FtsA C3Y93_09215 7c62335d306ac25d72aa2419f249f047 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 1.3E-8 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 C3Y93_09215 7c62335d306ac25d72aa2419f249f047 420 Gene3D G3DSA:3.30.420.40 198 351 1.5E-83 T 14-10-2018 C3Y93_07430 bda129024bdb874ac12e75a1b322a33b 203 SUPERFAMILY SSF53335 14 188 1.19E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_07430 bda129024bdb874ac12e75a1b322a33b 203 Pfam PF13649 Methyltransferase domain 49 137 3.5E-16 T 14-10-2018 C3Y93_07430 bda129024bdb874ac12e75a1b322a33b 203 Gene3D G3DSA:3.40.50.150 9 201 3.5E-35 T 14-10-2018 C3Y93_03145 3490f1d46145485e78e9a6b2834d4c19 91 Pfam PF15781 ParE-like toxin of type II bacterial toxin-antitoxin system 4 90 3.1E-32 T 14-10-2018 IPR031552 Type II bacterial toxin-antitoxin system, ParE-like toxin C3Y93_03145 3490f1d46145485e78e9a6b2834d4c19 91 Gene3D G3DSA:3.30.2310.20 2 90 4.8E-5 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C3Y93_04295 c5091a661aa97e3332a5f1b6351fc32e 488 Pfam PF01928 CYTH domain 1 189 3.1E-16 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 C3Y93_04295 c5091a661aa97e3332a5f1b6351fc32e 488 Gene3D G3DSA:1.40.20.10 207 485 3.4E-48 T 14-10-2018 IPR038186 CHAD domain superfamily C3Y93_04295 c5091a661aa97e3332a5f1b6351fc32e 488 Pfam PF05235 CHAD domain 230 445 1.2E-41 T 14-10-2018 IPR007899 CHAD domain C3Y93_04295 c5091a661aa97e3332a5f1b6351fc32e 488 SMART SM01118 1 202 4.0E-18 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 C3Y93_04295 c5091a661aa97e3332a5f1b6351fc32e 488 SMART SM00880 228 480 1.4E-50 T 14-10-2018 IPR007899 CHAD domain C3Y93_04295 c5091a661aa97e3332a5f1b6351fc32e 488 SUPERFAMILY SSF55154 1 204 1.8E-32 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 C3Y93_04295 c5091a661aa97e3332a5f1b6351fc32e 488 Gene3D G3DSA:2.40.320.10 1 186 1.4E-28 T 14-10-2018 C3Y93_10705 2208080d1577edcac837b15566fe2728 351 SUPERFAMILY SSF100879 237 336 2.94E-19 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3Y93_10705 2208080d1577edcac837b15566fe2728 351 SUPERFAMILY SSF56672 1 233 4.09E-91 T 14-10-2018 C3Y93_10705 2208080d1577edcac837b15566fe2728 351 Gene3D G3DSA:3.30.70.270 4 163 2.7E-62 T 14-10-2018 C3Y93_10705 2208080d1577edcac837b15566fe2728 351 Pfam PF11798 IMS family HHH motif 168 196 1.7E-8 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 C3Y93_10705 2208080d1577edcac837b15566fe2728 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 232 347 2.3E-12 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3Y93_10705 2208080d1577edcac837b15566fe2728 351 Gene3D G3DSA:2.30.40.20 21 72 2.7E-62 T 14-10-2018 C3Y93_10705 2208080d1577edcac837b15566fe2728 351 Gene3D G3DSA:3.30.1490.100 239 347 4.0E-18 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3Y93_10705 2208080d1577edcac837b15566fe2728 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 350 36.878 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 C3Y93_10705 2208080d1577edcac837b15566fe2728 351 Gene3D G3DSA:1.10.150.20 165 227 1.8E-19 T 14-10-2018 C3Y93_10705 2208080d1577edcac837b15566fe2728 351 Pfam PF00817 impB/mucB/samB family 7 153 5.0E-51 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C3Y93_05975 ac854950c29e59c58149fe0916b9c76a 205 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 160 1.4E-12 T 14-10-2018 C3Y93_05975 ac854950c29e59c58149fe0916b9c76a 205 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 1 200 1.4E-96 T 14-10-2018 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 C3Y93_05975 ac854950c29e59c58149fe0916b9c76a 205 SUPERFAMILY SSF56784 1 196 2.52E-44 T 14-10-2018 IPR036412 HAD-like superfamily C3Y93_05975 ac854950c29e59c58149fe0916b9c76a 205 Pfam PF00702 haloacid dehalogenase-like hydrolase 59 164 9.1E-11 T 14-10-2018 C3Y93_05975 ac854950c29e59c58149fe0916b9c76a 205 Gene3D G3DSA:3.40.50.1000 3 191 4.1E-78 T 14-10-2018 IPR023214 HAD superfamily C3Y93_05975 ac854950c29e59c58149fe0916b9c76a 205 Gene3D G3DSA:3.90.1470.10 13 128 4.1E-78 T 14-10-2018 C3Y93_01135 0f5fdfcf15dbeee42558664c54234dc0 328 Pfam PF02371 Transposase IS116/IS110/IS902 family 201 286 2.3E-18 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 C3Y93_01135 0f5fdfcf15dbeee42558664c54234dc0 328 Pfam PF01548 Transposase 4 154 9.1E-26 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 C3Y93_01225 0f5fdfcf15dbeee42558664c54234dc0 328 Pfam PF02371 Transposase IS116/IS110/IS902 family 201 286 2.3E-18 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 C3Y93_01225 0f5fdfcf15dbeee42558664c54234dc0 328 Pfam PF01548 Transposase 4 154 9.1E-26 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 C3Y93_11850 0f5fdfcf15dbeee42558664c54234dc0 328 Pfam PF02371 Transposase IS116/IS110/IS902 family 201 286 2.3E-18 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 C3Y93_11850 0f5fdfcf15dbeee42558664c54234dc0 328 Pfam PF01548 Transposase 4 154 9.1E-26 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 C3Y93_03905 02d190066f4771eeaf22f49e578eb79f 300 Gene3D G3DSA:3.40.50.150 102 300 4.4E-53 T 14-10-2018 C3Y93_03905 02d190066f4771eeaf22f49e578eb79f 300 SUPERFAMILY SSF53335 69 290 5.97E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_03905 02d190066f4771eeaf22f49e578eb79f 300 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 297 31.737 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 C3Y93_03905 02d190066f4771eeaf22f49e578eb79f 300 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 291 1.6E-82 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 C3Y93_03905 02d190066f4771eeaf22f49e578eb79f 300 PIRSF PIRSF000401 1 299 2.2E-83 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 C3Y93_03905 02d190066f4771eeaf22f49e578eb79f 300 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 297 1.3E-87 T 14-10-2018 C3Y93_01345 32821c20a92a6f1391a099cb72809d87 297 SUPERFAMILY SSF46785 6 85 1.5E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_01345 32821c20a92a6f1391a099cb72809d87 297 Pfam PF03466 LysR substrate binding domain 96 287 8.9E-21 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_01345 32821c20a92a6f1391a099cb72809d87 297 Gene3D G3DSA:1.10.10.10 8 96 3.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_01345 32821c20a92a6f1391a099cb72809d87 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_01345 32821c20a92a6f1391a099cb72809d87 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_01345 32821c20a92a6f1391a099cb72809d87 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_01345 32821c20a92a6f1391a099cb72809d87 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.1E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_01345 32821c20a92a6f1391a099cb72809d87 297 Gene3D G3DSA:3.40.190.10 104 287 8.9E-35 T 14-10-2018 C3Y93_01345 32821c20a92a6f1391a099cb72809d87 297 Gene3D G3DSA:3.40.190.10 167 262 8.9E-35 T 14-10-2018 C3Y93_01345 32821c20a92a6f1391a099cb72809d87 297 SUPERFAMILY SSF53850 97 289 1.41E-23 T 14-10-2018 C3Y93_02275 b35c3cd65bff93a6e79c0c46df85c3d4 221 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 215 7.4E-31 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 C3Y93_06220 7956cad4be313d0eb28444f31300e9d8 282 SUPERFAMILY SSF56235 2 252 6.18E-44 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3Y93_06220 7956cad4be313d0eb28444f31300e9d8 282 Gene3D G3DSA:3.60.20.10 1 258 6.5E-95 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3Y93_06220 7956cad4be313d0eb28444f31300e9d8 282 Pfam PF13230 Glutamine amidotransferases class-II 1 265 1.5E-121 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 C3Y93_11115 298be032fe370f8f9ada4b7dec33481d 142 Gene3D G3DSA:3.30.1550.10 2 72 2.2E-36 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily C3Y93_11115 298be032fe370f8f9ada4b7dec33481d 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 8.9E-66 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_11115 298be032fe370f8f9ada4b7dec33481d 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 141 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_11115 298be032fe370f8f9ada4b7dec33481d 142 SUPERFAMILY SSF46906 68 141 6.93E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily C3Y93_11115 298be032fe370f8f9ada4b7dec33481d 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 8.0E-24 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 C3Y93_11115 298be032fe370f8f9ada4b7dec33481d 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.213 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 C3Y93_11115 298be032fe370f8f9ada4b7dec33481d 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 6.0E-32 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal C3Y93_11115 298be032fe370f8f9ada4b7dec33481d 142 Gene3D G3DSA:1.10.10.250 73 141 9.5E-27 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily C3Y93_11115 298be032fe370f8f9ada4b7dec33481d 142 SMART SM00649 9 141 2.1E-85 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 C3Y93_11115 298be032fe370f8f9ada4b7dec33481d 142 SUPERFAMILY SSF54747 3 73 3.79E-31 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily C3Y93_11115 298be032fe370f8f9ada4b7dec33481d 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-15 T 14-10-2018 C3Y93_13650 ebcdb6f4166e9f449d92d65dd01d3c83 508 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 18 506 2.4E-199 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3Y93_13650 ebcdb6f4166e9f449d92d65dd01d3c83 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 389 405 4.6E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3Y93_13650 ebcdb6f4166e9f449d92d65dd01d3c83 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 246 259 4.6E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3Y93_13650 ebcdb6f4166e9f449d92d65dd01d3c83 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 201 211 4.6E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3Y93_13650 ebcdb6f4166e9f449d92d65dd01d3c83 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 217 233 4.6E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3Y93_13650 ebcdb6f4166e9f449d92d65dd01d3c83 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 264 281 4.6E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3Y93_13650 ebcdb6f4166e9f449d92d65dd01d3c83 508 Gene3D G3DSA:2.40.50.140 8 159 2.6E-34 T 14-10-2018 C3Y93_13650 ebcdb6f4166e9f449d92d65dd01d3c83 508 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 22 507 43.655 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C3Y93_13650 ebcdb6f4166e9f449d92d65dd01d3c83 508 Gene3D G3DSA:3.30.930.10 160 508 2.4E-127 T 14-10-2018 C3Y93_13650 ebcdb6f4166e9f449d92d65dd01d3c83 508 Pfam PF01336 OB-fold nucleic acid binding domain 75 148 9.5E-11 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 C3Y93_13650 ebcdb6f4166e9f449d92d65dd01d3c83 508 Pfam PF00152 tRNA synthetases class II (D, K and N) 165 504 4.6E-79 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_13650 ebcdb6f4166e9f449d92d65dd01d3c83 508 SUPERFAMILY SSF50249 15 157 3.0E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_13650 ebcdb6f4166e9f449d92d65dd01d3c83 508 SUPERFAMILY SSF55681 164 505 1.15E-114 T 14-10-2018 C3Y93_11830 651c0d3c54ff6afd211437d6e845f69f 350 Pfam PF12706 Beta-lactamase superfamily domain 114 308 1.4E-35 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_11830 651c0d3c54ff6afd211437d6e845f69f 350 Gene3D G3DSA:3.60.15.10 65 350 1.8E-71 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_11830 651c0d3c54ff6afd211437d6e845f69f 350 SUPERFAMILY SSF56281 96 313 2.88E-28 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_11830 651c0d3c54ff6afd211437d6e845f69f 350 PIRSF PIRSF038896 17 350 8.7E-87 T 14-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 C3Y93_00690 882898d337d0954cc4bd415a862baa61 212 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 14-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 C3Y93_00690 882898d337d0954cc4bd415a862baa61 212 Pfam PF01144 Coenzyme A transferase 7 201 6.5E-43 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 C3Y93_00690 882898d337d0954cc4bd415a862baa61 212 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 208 1.3E-99 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 C3Y93_00690 882898d337d0954cc4bd415a862baa61 212 Gene3D G3DSA:3.40.1080.10 2 211 5.8E-102 T 14-10-2018 C3Y93_00690 882898d337d0954cc4bd415a862baa61 212 SUPERFAMILY SSF100950 3 206 9.21E-75 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C3Y93_00690 882898d337d0954cc4bd415a862baa61 212 SMART SM00882 6 202 3.1E-77 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 C3Y93_10370 879ea7e2157da995ab1d1087082b9dac 424 SUPERFAMILY SSF55073 248 404 1.1E-46 T 14-10-2018 IPR029787 Nucleotide cyclase C3Y93_10370 879ea7e2157da995ab1d1087082b9dac 424 SMART SM00267 232 403 2.0E-57 T 14-10-2018 IPR000160 GGDEF domain C3Y93_10370 879ea7e2157da995ab1d1087082b9dac 424 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 239 401 2.9E-55 T 14-10-2018 IPR000160 GGDEF domain C3Y93_10370 879ea7e2157da995ab1d1087082b9dac 424 Gene3D G3DSA:3.30.70.270 235 405 3.4E-57 T 14-10-2018 C3Y93_10370 879ea7e2157da995ab1d1087082b9dac 424 Pfam PF00990 Diguanylate cyclase, GGDEF domain 243 398 1.5E-47 T 14-10-2018 IPR000160 GGDEF domain C3Y93_12140 2aedc2eb2edf0e7bb7e070ebffb98fd6 215 SUPERFAMILY SSF55895 32 211 1.31E-18 T 14-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 C3Y93_12140 2aedc2eb2edf0e7bb7e070ebffb98fd6 215 Gene3D G3DSA:3.90.730.10 23 214 4.9E-12 T 14-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 C3Y93_12140 2aedc2eb2edf0e7bb7e070ebffb98fd6 215 Pfam PF00445 Ribonuclease T2 family 44 191 2.2E-6 T 14-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 C3Y93_01725 46d48463e77e79b18cc0ce7b99cca204 198 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 143 3.7E-26 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 C3Y93_01725 46d48463e77e79b18cc0ce7b99cca204 198 SUPERFAMILY SSF55620 1 145 3.0E-31 T 14-10-2018 C3Y93_01725 46d48463e77e79b18cc0ce7b99cca204 198 Gene3D G3DSA:3.30.479.10 1 144 2.2E-23 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 SUPERFAMILY SSF52540 16 236 9.81E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 Gene3D G3DSA:2.40.30.10 241 328 9.6E-28 T 14-10-2018 C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 Gene3D G3DSA:2.40.30.10 331 435 1.3E-34 T 14-10-2018 C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 434 5.4E-195 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 SUPERFAMILY SSF50447 241 327 6.19E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 PRINTS PR00315 GTP-binding elongation factor signature 160 169 1.5E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 PRINTS PR00315 GTP-binding elongation factor signature 26 39 1.5E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 PRINTS PR00315 GTP-binding elongation factor signature 107 117 1.5E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 PRINTS PR00315 GTP-binding elongation factor signature 123 134 1.5E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 PRINTS PR00315 GTP-binding elongation factor signature 87 95 1.5E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 Gene3D G3DSA:3.40.50.300 1 239 1.4E-75 T 14-10-2018 C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 SUPERFAMILY SSF50465 333 434 6.12E-32 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 Pfam PF00009 Elongation factor Tu GTP binding domain 24 213 6.8E-45 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 212 1.6E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3Y93_13675 1b1dcf75519e48d9a12b494b352d5754 538 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 478 51.717 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 C3Y93_14180 797bc040653789f4979237d7c9045ed4 327 SUPERFAMILY SSF46785 141 240 2.78E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_14180 797bc040653789f4979237d7c9045ed4 327 Gene3D G3DSA:1.10.10.10 5 153 1.3E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_14180 797bc040653789f4979237d7c9045ed4 327 Gene3D G3DSA:1.10.10.10 154 246 1.5E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_14180 797bc040653789f4979237d7c9045ed4 327 SUPERFAMILY SSF46785 19 149 1.27E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_14180 797bc040653789f4979237d7c9045ed4 327 Pfam PF01051 Initiator Replication protein 15 237 7.5E-53 T 14-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 C3Y93_08645 7bc8bb1648a504d1440fe320ca079ea2 534 TIGRFAM TIGR03238 dnd_assoc_3: DNA phosphorothioation-dependent restriction protein DptF 28 528 1.7E-125 T 14-10-2018 IPR017647 DNA phosphorothioation-dependent restriction protein DptF C3Y93_13205 7fcdd03b0fdaa7de4fa7adff5214b605 247 SUPERFAMILY SSF64438 18 245 2.93E-65 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic C3Y93_13205 7fcdd03b0fdaa7de4fa7adff5214b605 247 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 26 243 2.7E-60 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase C3Y93_13205 7fcdd03b0fdaa7de4fa7adff5214b605 247 Gene3D G3DSA:3.60.140.10 10 247 2.2E-67 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily C3Y93_13205 7fcdd03b0fdaa7de4fa7adff5214b605 247 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 245 2.5E-49 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase C3Y93_01385 444294ccfaf7f5d714010d4f1cd25d33 411 Gene3D G3DSA:2.40.30.170 93 326 1.3E-66 T 14-10-2018 C3Y93_01385 444294ccfaf7f5d714010d4f1cd25d33 411 Gene3D G3DSA:2.40.50.100 107 246 1.3E-66 T 14-10-2018 C3Y93_01385 444294ccfaf7f5d714010d4f1cd25d33 411 Gene3D G3DSA:2.40.420.20 81 391 1.3E-66 T 14-10-2018 C3Y93_01385 444294ccfaf7f5d714010d4f1cd25d33 411 SUPERFAMILY SSF111369 106 324 1.7E-23 T 14-10-2018 C3Y93_01385 444294ccfaf7f5d714010d4f1cd25d33 411 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 93 319 9.9E-32 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3Y93_01385 444294ccfaf7f5d714010d4f1cd25d33 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 83 399 8.2E-43 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3Y93_01385 444294ccfaf7f5d714010d4f1cd25d33 411 Gene3D G3DSA:1.10.287.470 141 211 1.3E-66 T 14-10-2018 C3Y93_02490 5913190c524a2fec4d97170b7dcefdef 619 Gene3D G3DSA:3.40.50.300 351 605 1.4E-89 T 14-10-2018 C3Y93_02490 5913190c524a2fec4d97170b7dcefdef 619 SMART SM00382 385 576 4.6E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_02490 5913190c524a2fec4d97170b7dcefdef 619 Pfam PF00005 ABC transporter 377 530 1.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_02490 5913190c524a2fec4d97170b7dcefdef 619 SUPERFAMILY SSF52540 351 600 3.16E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_02490 5913190c524a2fec4d97170b7dcefdef 619 Pfam PF00664 ABC transporter transmembrane region 41 308 9.4E-16 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 C3Y93_02490 5913190c524a2fec4d97170b7dcefdef 619 SUPERFAMILY SSF90123 30 342 8.63E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3Y93_02490 5913190c524a2fec4d97170b7dcefdef 619 Gene3D G3DSA:1.20.1560.10 28 348 3.9E-25 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C3Y93_02490 5913190c524a2fec4d97170b7dcefdef 619 ProSitePatterns PS00211 ABC transporters family signature. 502 516 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_00415 712c32692f16183e77a6c40a3e954e78 377 Pfam PF03054 tRNA methyl transferase 3 366 5.3E-134 T 14-10-2018 C3Y93_00415 712c32692f16183e77a6c40a3e954e78 377 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3 366 6.9E-133 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 C3Y93_00415 712c32692f16183e77a6c40a3e954e78 377 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 3 367 38.722 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 C3Y93_00415 712c32692f16183e77a6c40a3e954e78 377 SUPERFAMILY SSF52402 2 245 1.39E-55 T 14-10-2018 C3Y93_00415 712c32692f16183e77a6c40a3e954e78 377 Gene3D G3DSA:2.30.30.280 215 282 2.2E-24 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 C3Y93_00415 712c32692f16183e77a6c40a3e954e78 377 Gene3D G3DSA:2.40.30.10 284 375 8.6E-26 T 14-10-2018 C3Y93_00415 712c32692f16183e77a6c40a3e954e78 377 Gene3D G3DSA:3.40.50.620 1 214 2.9E-90 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_11845 9b266612bacf3d63ac78adaa226939f7 550 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 289 442 3.6E-32 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3Y93_11845 9b266612bacf3d63ac78adaa226939f7 550 Gene3D G3DSA:2.40.110.20 130 289 7.5E-53 T 14-10-2018 C3Y93_11845 9b266612bacf3d63ac78adaa226939f7 550 SUPERFAMILY SSF47203 287 446 1.42E-38 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3Y93_11845 9b266612bacf3d63ac78adaa226939f7 550 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 401 420 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 C3Y93_11845 9b266612bacf3d63ac78adaa226939f7 550 SUPERFAMILY SSF56645 67 296 6.91E-31 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3Y93_11845 9b266612bacf3d63ac78adaa226939f7 550 Gene3D G3DSA:1.20.140.10 290 444 1.6E-35 T 14-10-2018 C3Y93_11845 9b266612bacf3d63ac78adaa226939f7 550 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 180 279 2.2E-15 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3Y93_05390 24b0ec85819a76f524167a5f7a03f82d 571 SUPERFAMILY SSF56176 15 276 1.73E-66 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3Y93_05390 24b0ec85819a76f524167a5f7a03f82d 571 Gene3D G3DSA:3.30.43.10 7 107 2.7E-10 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 C3Y93_05390 24b0ec85819a76f524167a5f7a03f82d 571 Pfam PF09330 D-lactate dehydrogenase, membrane binding 282 570 6.4E-133 T 14-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 C3Y93_05390 24b0ec85819a76f524167a5f7a03f82d 571 Pfam PF01565 FAD binding domain 52 184 3.5E-9 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C3Y93_05390 24b0ec85819a76f524167a5f7a03f82d 571 Gene3D G3DSA:3.30.70.610 274 350 1.6E-12 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 C3Y93_05390 24b0ec85819a76f524167a5f7a03f82d 571 Gene3D G3DSA:3.30.70.610 363 437 1.6E-14 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 C3Y93_05390 24b0ec85819a76f524167a5f7a03f82d 571 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 14 571 55.801 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 C3Y93_05390 24b0ec85819a76f524167a5f7a03f82d 571 PIRSF PIRSF000101 8 571 6.9E-262 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 C3Y93_05390 24b0ec85819a76f524167a5f7a03f82d 571 Gene3D G3DSA:3.30.1370.20 438 522 7.1E-40 T 14-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 C3Y93_05390 24b0ec85819a76f524167a5f7a03f82d 571 Gene3D G3DSA:3.30.465.10 110 273 2.1E-73 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C3Y93_05390 24b0ec85819a76f524167a5f7a03f82d 571 SUPERFAMILY SSF55103 280 570 1.57E-100 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 C3Y93_12130 63d7aad7155d2b5707033a9188b026d2 484 Gene3D G3DSA:3.40.50.12160 32 166 2.5E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily C3Y93_12130 63d7aad7155d2b5707033a9188b026d2 484 SUPERFAMILY SSF102114 166 408 4.58E-61 T 14-10-2018 C3Y93_12130 63d7aad7155d2b5707033a9188b026d2 484 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 32 477 69.326 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 C3Y93_12130 63d7aad7155d2b5707033a9188b026d2 484 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 33 471 1.2E-141 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 C3Y93_12130 63d7aad7155d2b5707033a9188b026d2 484 Pfam PF00919 Uncharacterized protein family UPF0004 33 133 1.6E-28 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 C3Y93_12130 63d7aad7155d2b5707033a9188b026d2 484 Pfam PF04055 Radical SAM superfamily 187 361 3.2E-29 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C3Y93_12130 63d7aad7155d2b5707033a9188b026d2 484 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 187 207 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 C3Y93_12130 63d7aad7155d2b5707033a9188b026d2 484 Pfam PF01938 TRAM domain 415 476 5.1E-9 T 14-10-2018 IPR002792 TRAM domain C3Y93_12130 63d7aad7155d2b5707033a9188b026d2 484 Gene3D G3DSA:3.80.30.20 182 416 4.7E-81 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C3Y93_12130 63d7aad7155d2b5707033a9188b026d2 484 SMART SM00729 183 403 5.3E-59 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C3Y93_12130 63d7aad7155d2b5707033a9188b026d2 484 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 33 471 1.1E-176 T 14-10-2018 C3Y93_03865 5bd5e9129de554ec0a273e7f81581c24 590 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 99 270 9.9E-67 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 C3Y93_03865 5bd5e9129de554ec0a273e7f81581c24 590 Gene3D G3DSA:3.40.50.1820 223 414 5.5E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_03865 5bd5e9129de554ec0a273e7f81581c24 590 SUPERFAMILY SSF53474 232 518 8.9E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_03865 5bd5e9129de554ec0a273e7f81581c24 590 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 56 586 1.3E-258 T 14-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 C3Y93_03430 2fc8f322f790a721afb92ef695beba06 302 Gene3D G3DSA:3.40.50.1820 2 299 4.6E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_03430 2fc8f322f790a721afb92ef695beba06 302 Pfam PF12697 Alpha/beta hydrolase family 23 291 1.1E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_03430 2fc8f322f790a721afb92ef695beba06 302 SUPERFAMILY SSF53474 3 299 1.34E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_05455 6a6446c0a72df33f51b3081c1a61cc5d 264 SUPERFAMILY SSF54862 11 144 1.73E-25 T 14-10-2018 C3Y93_05455 6a6446c0a72df33f51b3081c1a61cc5d 264 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 6 146 5.4E-55 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 C3Y93_05455 6a6446c0a72df33f51b3081c1a61cc5d 264 Gene3D G3DSA:3.30.70.20 74 184 6.1E-17 T 14-10-2018 C3Y93_05455 6a6446c0a72df33f51b3081c1a61cc5d 264 Pfam PF04060 Putative Fe-S cluster 15 47 2.9E-10 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 C3Y93_05455 6a6446c0a72df33f51b3081c1a61cc5d 264 Pfam PF14697 4Fe-4S dicluster domain 85 138 9.0E-16 T 14-10-2018 C3Y93_05455 6a6446c0a72df33f51b3081c1a61cc5d 264 Gene3D G3DSA:3.20.20.20 7 71 9.2E-8 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C3Y93_05455 6a6446c0a72df33f51b3081c1a61cc5d 264 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 122 133 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3Y93_12410 33d1c74e20b3b9e2a2f2f9e19514e0a0 158 PRINTS PR01021 OMPA domain signature 101 117 5.7E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_12410 33d1c74e20b3b9e2a2f2f9e19514e0a0 158 PRINTS PR01021 OMPA domain signature 56 78 5.7E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_12410 33d1c74e20b3b9e2a2f2f9e19514e0a0 158 PRINTS PR01021 OMPA domain signature 86 101 5.7E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_12410 33d1c74e20b3b9e2a2f2f9e19514e0a0 158 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 119 138 3.0E-5 T 14-10-2018 C3Y93_12410 33d1c74e20b3b9e2a2f2f9e19514e0a0 158 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 101 118 3.0E-5 T 14-10-2018 C3Y93_12410 33d1c74e20b3b9e2a2f2f9e19514e0a0 158 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 139 158 3.0E-5 T 14-10-2018 C3Y93_12410 33d1c74e20b3b9e2a2f2f9e19514e0a0 158 Pfam PF00691 OmpA family 55 150 4.0E-21 T 14-10-2018 IPR006665 OmpA-like domain C3Y93_12410 33d1c74e20b3b9e2a2f2f9e19514e0a0 158 SUPERFAMILY SSF103088 43 158 4.32E-34 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3Y93_12410 33d1c74e20b3b9e2a2f2f9e19514e0a0 158 Gene3D G3DSA:3.30.1330.60 23 157 4.3E-38 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3Y93_14035 0742709a1b2c04077ec42d26546f0b9d 209 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 184 30.113 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 C3Y93_14035 0742709a1b2c04077ec42d26546f0b9d 209 SUPERFAMILY SSF53328 3 198 9.55E-64 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3Y93_14035 0742709a1b2c04077ec42d26546f0b9d 209 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 130 153 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3Y93_14035 0742709a1b2c04077ec42d26546f0b9d 209 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 186 8.6E-70 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 C3Y93_14035 0742709a1b2c04077ec42d26546f0b9d 209 Gene3D G3DSA:3.40.50.170 1 206 3.3E-77 T 14-10-2018 C3Y93_14035 0742709a1b2c04077ec42d26546f0b9d 209 Pfam PF00551 Formyl transferase 3 178 2.5E-58 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C3Y93_08765 1a0cf87d3ae2e6c1f705475f94a2e9a5 103 Gene3D G3DSA:3.10.450.530 1 91 2.1E-21 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily C3Y93_08765 1a0cf87d3ae2e6c1f705475f94a2e9a5 103 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 7 88 4.9E-26 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system C3Y93_10505 da51f0d5b23deb334835e886d0a420b4 960 Gene3D G3DSA:3.30.1920.30 254 335 3.1E-38 T 14-10-2018 C3Y93_10505 da51f0d5b23deb334835e886d0a420b4 960 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 561 668 4.8E-34 T 14-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain C3Y93_10505 da51f0d5b23deb334835e886d0a420b4 960 Pfam PF05954 Phage late control gene D protein (GPD) 43 384 4.3E-54 T 14-10-2018 C3Y93_10505 da51f0d5b23deb334835e886d0a420b4 960 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 694 841 1.3E-42 T 14-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal C3Y93_10505 da51f0d5b23deb334835e886d0a420b4 960 Gene3D G3DSA:2.30.110.50 30 379 3.1E-38 T 14-10-2018 C3Y93_10505 da51f0d5b23deb334835e886d0a420b4 960 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 36 588 8.7E-52 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein C3Y93_10505 da51f0d5b23deb334835e886d0a420b4 960 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 26 586 1.7E-66 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset C3Y93_10505 da51f0d5b23deb334835e886d0a420b4 960 SUPERFAMILY SSF69279 25 197 4.34E-33 T 14-10-2018 C3Y93_10505 da51f0d5b23deb334835e886d0a420b4 960 SUPERFAMILY SSF69255 438 533 6.02E-24 T 14-10-2018 C3Y93_10505 da51f0d5b23deb334835e886d0a420b4 960 Gene3D G3DSA:3.55.50.10 111 221 3.1E-38 T 14-10-2018 C3Y93_10505 da51f0d5b23deb334835e886d0a420b4 960 Gene3D G3DSA:2.40.50.230 430 538 1.4E-31 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily C3Y93_11935 023d204d85197112513f34fbe7076a72 326 PIRSF PIRSF500176 1 311 1.2E-46 T 14-10-2018 C3Y93_11935 023d204d85197112513f34fbe7076a72 326 SMART SM00870 4 319 8.0E-18 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3Y93_11935 023d204d85197112513f34fbe7076a72 326 Pfam PF00710 Asparaginase, N-terminal 4 176 2.2E-34 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 C3Y93_11935 023d204d85197112513f34fbe7076a72 326 SUPERFAMILY SSF53774 1 324 1.14E-59 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 C3Y93_11935 023d204d85197112513f34fbe7076a72 326 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 1.2E-5 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3Y93_11935 023d204d85197112513f34fbe7076a72 326 PRINTS PR00139 Asparaginase/glutaminase family signature 257 275 1.2E-5 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3Y93_11935 023d204d85197112513f34fbe7076a72 326 PRINTS PR00139 Asparaginase/glutaminase family signature 78 96 1.2E-5 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3Y93_11935 023d204d85197112513f34fbe7076a72 326 PIRSF PIRSF001220 1 314 3.9E-35 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 C3Y93_11935 023d204d85197112513f34fbe7076a72 326 Gene3D G3DSA:3.40.50.40 211 325 3.1E-12 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 C3Y93_11935 023d204d85197112513f34fbe7076a72 326 Gene3D G3DSA:3.40.50.1170 1 202 1.0E-37 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 C3Y93_11640 e425b9db81ee370ee5d442709f1d0bd3 400 SUPERFAMILY SSF51905 2 394 3.54E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_11640 e425b9db81ee370ee5d442709f1d0bd3 400 Gene3D G3DSA:1.10.8.260 268 321 3.9E-62 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily C3Y93_11640 e425b9db81ee370ee5d442709f1d0bd3 400 SUPERFAMILY SSF160996 201 338 1.44E-16 T 14-10-2018 C3Y93_11640 e425b9db81ee370ee5d442709f1d0bd3 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.2E-5 T 14-10-2018 C3Y93_11640 e425b9db81ee370ee5d442709f1d0bd3 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 357 372 1.2E-5 T 14-10-2018 C3Y93_11640 e425b9db81ee370ee5d442709f1d0bd3 400 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 5 389 2.6E-78 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like C3Y93_11640 e425b9db81ee370ee5d442709f1d0bd3 400 Gene3D G3DSA:3.50.50.60 5 388 3.9E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_11640 e425b9db81ee370ee5d442709f1d0bd3 400 Gene3D G3DSA:2.40.30.10 189 338 3.9E-62 T 14-10-2018 C3Y93_11640 e425b9db81ee370ee5d442709f1d0bd3 400 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 25 397 2.8E-156 T 14-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 C3Y93_11640 e425b9db81ee370ee5d442709f1d0bd3 400 Pfam PF03486 HI0933-like protein 4 390 6.9E-87 T 14-10-2018 C3Y93_06205 e85e59908fe9156aef8998fb0f1ca625 103 SUPERFAMILY SSF54285 4 77 7.59E-19 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp C3Y93_06205 e85e59908fe9156aef8998fb0f1ca625 103 Gene3D G3DSA:3.10.20.280 1 87 3.2E-26 T 14-10-2018 IPR037021 RnfH superfamily C3Y93_06205 e85e59908fe9156aef8998fb0f1ca625 103 Hamap MF_00460 Protein RnfH [rnfH]. 5 93 19.589 T 14-10-2018 IPR005346 RnfH protein C3Y93_06205 e85e59908fe9156aef8998fb0f1ca625 103 Pfam PF03658 RnfH family Ubiquitin 6 85 1.9E-24 T 14-10-2018 IPR005346 RnfH protein C3Y93_07105 4600918295b3b453954b8ea75b054ce8 163 SUPERFAMILY SSF55021 2 76 2.29E-22 T 14-10-2018 C3Y93_07105 4600918295b3b453954b8ea75b054ce8 163 SUPERFAMILY SSF55021 79 161 1.83E-26 T 14-10-2018 C3Y93_07105 4600918295b3b453954b8ea75b054ce8 163 Gene3D G3DSA:3.30.70.260 1 78 1.2E-34 T 14-10-2018 C3Y93_07105 4600918295b3b453954b8ea75b054ce8 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 2.7E-64 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 C3Y93_07105 4600918295b3b453954b8ea75b054ce8 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 3.3E-27 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 C3Y93_07105 4600918295b3b453954b8ea75b054ce8 163 Gene3D G3DSA:3.30.70.1150 83 163 1.3E-29 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal C3Y93_07105 4600918295b3b453954b8ea75b054ce8 163 Pfam PF13710 ACT domain 12 73 3.8E-17 T 14-10-2018 C3Y93_07105 4600918295b3b453954b8ea75b054ce8 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 2.0E-37 T 14-10-2018 C3Y93_14055 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Gene3D G3DSA:3.30.200.20 4 92 1.6E-7 T 14-10-2018 C3Y93_14055 894e1f0ad6ba9ed50160bb983b4c7ca4 294 SUPERFAMILY SSF56112 31 242 1.11E-22 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3Y93_14055 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Gene3D G3DSA:3.90.1200.10 103 292 1.5E-25 T 14-10-2018 C3Y93_14055 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Pfam PF01636 Phosphotransferase enzyme family 27 245 2.3E-21 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase C3Y93_04345 64b6b168b4f9a864ab040134bd92722c 482 Gene3D G3DSA:3.40.50.620 6 215 9.7E-70 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_04345 64b6b168b4f9a864ab040134bd92722c 482 Pfam PF03441 FAD binding domain of DNA photolyase 288 481 2.7E-82 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 C3Y93_04345 64b6b168b4f9a864ab040134bd92722c 482 SUPERFAMILY SSF48173 211 481 8.37E-106 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 C3Y93_04345 64b6b168b4f9a864ab040134bd92722c 482 PRINTS PR00147 DNA photolyase signature 358 376 6.1E-21 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 C3Y93_04345 64b6b168b4f9a864ab040134bd92722c 482 PRINTS PR00147 DNA photolyase signature 338 354 6.1E-21 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 C3Y93_04345 64b6b168b4f9a864ab040134bd92722c 482 PRINTS PR00147 DNA photolyase signature 397 411 6.1E-21 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 C3Y93_04345 64b6b168b4f9a864ab040134bd92722c 482 Gene3D G3DSA:1.10.579.10 306 482 1.4E-80 T 14-10-2018 C3Y93_04345 64b6b168b4f9a864ab040134bd92722c 482 Pfam PF00875 DNA photolyase 6 175 3.3E-36 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 C3Y93_04345 64b6b168b4f9a864ab040134bd92722c 482 Gene3D G3DSA:1.25.40.80 139 299 9.7E-70 T 14-10-2018 C3Y93_04345 64b6b168b4f9a864ab040134bd92722c 482 SUPERFAMILY SSF52425 3 187 7.46E-42 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 C3Y93_00835 2f7f591ac46d3a90db7abc236359cbbd 159 Pfam PF04612 Type II secretion system (T2SS), protein M 18 158 3.1E-11 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 C3Y93_13140 45dadd31acf22edcca3cb44f5ab559f5 98 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 17 97 1.0E-37 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 C3Y93_13140 45dadd31acf22edcca3cb44f5ab559f5 98 Pfam PF01386 Ribosomal L25p family 6 95 4.3E-25 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 C3Y93_13140 45dadd31acf22edcca3cb44f5ab559f5 98 SUPERFAMILY SSF50715 5 97 2.62E-26 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3Y93_13140 45dadd31acf22edcca3cb44f5ab559f5 98 Gene3D G3DSA:2.40.240.10 3 98 3.6E-29 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C3Y93_13140 45dadd31acf22edcca3cb44f5ab559f5 98 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 4 98 24.14 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 C3Y93_06990 5883b395bf9cbb148b355396162d829e 708 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 691 708 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site C3Y93_06990 5883b395bf9cbb148b355396162d829e 708 SUPERFAMILY SSF56935 32 708 3.21E-89 T 14-10-2018 C3Y93_06990 5883b395bf9cbb148b355396162d829e 708 Gene3D G3DSA:2.170.130.10 41 159 1.1E-23 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C3Y93_06990 5883b395bf9cbb148b355396162d829e 708 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 148 7.8E-10 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C3Y93_06990 5883b395bf9cbb148b355396162d829e 708 Pfam PF00593 TonB dependent receptor 340 706 1.8E-38 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C3Y93_06990 5883b395bf9cbb148b355396162d829e 708 Gene3D G3DSA:2.40.170.20 161 708 5.6E-62 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C3Y93_10685 00285cf18a705aaa576b28e4793d7bc9 402 SUPERFAMILY SSF103473 13 397 4.97E-56 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_10685 00285cf18a705aaa576b28e4793d7bc9 402 Gene3D G3DSA:1.20.1250.20 16 395 4.3E-45 T 14-10-2018 C3Y93_10685 00285cf18a705aaa576b28e4793d7bc9 402 ProSitePatterns PS00216 Sugar transport proteins signature 1. 74 90 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C3Y93_10685 00285cf18a705aaa576b28e4793d7bc9 402 Pfam PF07690 Major Facilitator Superfamily 24 359 6.6E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_14010 dc93dad29e1aebcfa20a1b52ac08b06d 227 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_14010 dc93dad29e1aebcfa20a1b52ac08b06d 227 SMART SM00382 34 223 4.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_14010 dc93dad29e1aebcfa20a1b52ac08b06d 227 SUPERFAMILY SSF52540 5 226 7.01E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_14010 dc93dad29e1aebcfa20a1b52ac08b06d 227 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 223 5.2E-95 T 14-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 C3Y93_14010 dc93dad29e1aebcfa20a1b52ac08b06d 227 Gene3D G3DSA:3.40.50.300 3 227 2.9E-67 T 14-10-2018 C3Y93_14010 dc93dad29e1aebcfa20a1b52ac08b06d 227 Pfam PF00005 ABC transporter 27 174 2.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_00100 704fedb788c3d957b0ede70b99d8199f 446 Gene3D G3DSA:1.10.3410.10 245 356 8.1E-140 T 14-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 C3Y93_00100 704fedb788c3d957b0ede70b99d8199f 446 Gene3D G3DSA:1.10.3550.10 114 429 8.1E-140 T 14-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal C3Y93_00100 704fedb788c3d957b0ede70b99d8199f 446 Gene3D G3DSA:1.10.3210.10 28 244 8.1E-140 T 14-10-2018 C3Y93_00100 704fedb788c3d957b0ede70b99d8199f 446 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 26 438 8.4E-95 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 C3Y93_00100 704fedb788c3d957b0ede70b99d8199f 446 Pfam PF01966 HD domain 63 146 4.0E-9 T 14-10-2018 IPR006674 HD domain C3Y93_00100 704fedb788c3d957b0ede70b99d8199f 446 SMART SM00471 59 261 2.5E-7 T 14-10-2018 IPR003607 HD/PDEase domain C3Y93_00100 704fedb788c3d957b0ede70b99d8199f 446 SUPERFAMILY SSF109604 25 385 6.28E-64 T 14-10-2018 C3Y93_08560 b643a60cd0af45a21319b8bb70e3f063 173 Pfam PF04608 Phosphatidylglycerophosphatase A 26 167 1.5E-46 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 C3Y93_08560 b643a60cd0af45a21319b8bb70e3f063 173 PIRSF PIRSF006162 14 173 4.0E-49 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 C3Y93_08560 b643a60cd0af45a21319b8bb70e3f063 173 SUPERFAMILY SSF101307 18 169 1.22E-41 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 C3Y93_12910 ddf7e28261a18cb45914a2042447ba46 555 Pfam PF00672 HAMP domain 265 310 1.8E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3Y93_12910 ddf7e28261a18cb45914a2042447ba46 555 Gene3D G3DSA:3.30.565.10 384 544 2.6E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_12910 ddf7e28261a18cb45914a2042447ba46 555 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 532 4.6E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_12910 ddf7e28261a18cb45914a2042447ba46 555 SMART SM00388 314 379 1.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_12910 ddf7e28261a18cb45914a2042447ba46 555 SUPERFAMILY SSF158472 265 312 9.02E-7 T 14-10-2018 C3Y93_12910 ddf7e28261a18cb45914a2042447ba46 555 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 4.0E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_12910 ddf7e28261a18cb45914a2042447ba46 555 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 4.0E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_12910 ddf7e28261a18cb45914a2042447ba46 555 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 4.0E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_12910 ddf7e28261a18cb45914a2042447ba46 555 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 379 3.0E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_12910 ddf7e28261a18cb45914a2042447ba46 555 Gene3D G3DSA:1.10.287.130 265 380 4.5E-25 T 14-10-2018 C3Y93_12910 ddf7e28261a18cb45914a2042447ba46 555 SUPERFAMILY SSF47384 297 379 6.08E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3Y93_12910 ddf7e28261a18cb45914a2042447ba46 555 SMART SM00387 423 535 3.5E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_12910 ddf7e28261a18cb45914a2042447ba46 555 SUPERFAMILY SSF55874 368 533 9.43E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_12910 ddf7e28261a18cb45914a2042447ba46 555 SMART SM00304 261 313 2.8E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3Y93_10190 89893060de165083d7ede93bdc086c79 230 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 226 1.0E-100 T 14-10-2018 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 C3Y93_10190 89893060de165083d7ede93bdc086c79 230 SUPERFAMILY SSF53448 3 227 1.08E-58 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_10190 89893060de165083d7ede93bdc086c79 230 Pfam PF02348 Cytidylyltransferase 4 213 8.8E-36 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 C3Y93_10190 89893060de165083d7ede93bdc086c79 230 Gene3D G3DSA:3.90.550.10 2 227 1.1E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_03500 370cdaa2f19850506da7753c1a1c7e74 286 SUPERFAMILY SSF103481 182 282 2.09E-6 T 14-10-2018 C3Y93_03500 370cdaa2f19850506da7753c1a1c7e74 286 Pfam PF00892 EamA-like transporter family 3 132 3.9E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_03500 370cdaa2f19850506da7753c1a1c7e74 286 Pfam PF00892 EamA-like transporter family 147 280 3.1E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_03500 370cdaa2f19850506da7753c1a1c7e74 286 SUPERFAMILY SSF103481 41 135 2.09E-7 T 14-10-2018 C3Y93_09850 64f6e59f2dace02ead922b5bdcdb35f4 157 Pfam PF04940 Sensors of blue-light using FAD 2 95 6.9E-27 T 14-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 C3Y93_09850 64f6e59f2dace02ead922b5bdcdb35f4 157 SMART SM01034 2 96 1.7E-32 T 14-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 C3Y93_09850 64f6e59f2dace02ead922b5bdcdb35f4 157 SUPERFAMILY SSF54975 1 135 2.35E-34 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C3Y93_09850 64f6e59f2dace02ead922b5bdcdb35f4 157 Gene3D G3DSA:3.30.70.100 1 131 2.3E-33 T 14-10-2018 C3Y93_13995 6b3ed74bc4e1198e994341cafe29f79d 303 SUPERFAMILY SSF103481 40 141 4.58E-11 T 14-10-2018 C3Y93_13995 6b3ed74bc4e1198e994341cafe29f79d 303 SUPERFAMILY SSF103481 189 288 1.7E-11 T 14-10-2018 C3Y93_13995 6b3ed74bc4e1198e994341cafe29f79d 303 Pfam PF00892 EamA-like transporter family 11 137 8.4E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_13995 6b3ed74bc4e1198e994341cafe29f79d 303 Pfam PF00892 EamA-like transporter family 149 285 6.8E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_13690 d9857e93b781d87f8f0a54309c525de7 192 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 2 184 1.5E-24 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 C3Y93_13690 d9857e93b781d87f8f0a54309c525de7 192 Pfam PF04973 Nicotinamide mononucleotide transporter 2 181 2.4E-43 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 C3Y93_00075 9d98b22bd64341a929e1c23c1c64577b 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 83 207 2.4E-38 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel C3Y93_00075 9d98b22bd64341a929e1c23c1c64577b 232 TIGRFAM TIGR02796 tolQ: protein TolQ 11 222 5.3E-81 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 C3Y93_00075 9d98b22bd64341a929e1c23c1c64577b 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 9 227 38.333 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 C3Y93_08190 d64bccce599168f1ab2c296d9cfd8125 543 Pfam PF04932 O-Antigen ligase 192 342 4.7E-13 T 14-10-2018 IPR007016 O-antigen ligase-related C3Y93_08190 d64bccce599168f1ab2c296d9cfd8125 543 Pfam PF15864 Protein glycosylation ligase 154 179 1.0E-9 T 14-10-2018 IPR031726 Protein glycosylation ligase domain C3Y93_08190 d64bccce599168f1ab2c296d9cfd8125 543 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 369 520 9.3E-13 T 14-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal C3Y93_11010 5a59bdfe7fcb247573e96d6e6ee02528 246 Gene3D G3DSA:3.40.50.2300 1 132 1.4E-40 T 14-10-2018 C3Y93_11010 5a59bdfe7fcb247573e96d6e6ee02528 246 SUPERFAMILY SSF52172 1 176 1.57E-38 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_11010 5a59bdfe7fcb247573e96d6e6ee02528 246 Pfam PF00072 Response regulator receiver domain 3 111 2.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_11010 5a59bdfe7fcb247573e96d6e6ee02528 246 SMART SM00850 147 244 1.6E-25 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 C3Y93_11010 5a59bdfe7fcb247573e96d6e6ee02528 246 Gene3D G3DSA:2.40.50.40 137 206 1.9E-10 T 14-10-2018 C3Y93_11010 5a59bdfe7fcb247573e96d6e6ee02528 246 SMART SM00448 1 111 8.4E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_11010 5a59bdfe7fcb247573e96d6e6ee02528 246 Pfam PF04397 LytTr DNA-binding domain 150 243 8.5E-21 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 C3Y93_00910 a5f33c02fbe3b63d685ce0619878aded 290 Gene3D G3DSA:3.40.50.300 49 191 1.1E-11 T 14-10-2018 C3Y93_00910 a5f33c02fbe3b63d685ce0619878aded 290 Pfam PF05673 Protein of unknown function (DUF815) 36 284 1.3E-104 T 14-10-2018 IPR008533 Domain of unknown function DUF815 C3Y93_00910 a5f33c02fbe3b63d685ce0619878aded 290 SUPERFAMILY SSF52540 31 191 1.41E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_02160 b864d2d06d54dbbf35fcfbd8adfe5c7f 137 Pfam PF01230 HIT domain 14 109 4.1E-26 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3Y93_02160 b864d2d06d54dbbf35fcfbd8adfe5c7f 137 Gene3D G3DSA:3.30.428.10 1 137 1.8E-38 T 14-10-2018 IPR036265 HIT-like superfamily C3Y93_02160 b864d2d06d54dbbf35fcfbd8adfe5c7f 137 PRINTS PR00332 Histidine triad family signature 29 47 5.7E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3Y93_02160 b864d2d06d54dbbf35fcfbd8adfe5c7f 137 PRINTS PR00332 Histidine triad family signature 96 106 5.7E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3Y93_02160 b864d2d06d54dbbf35fcfbd8adfe5c7f 137 PRINTS PR00332 Histidine triad family signature 8 24 5.7E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C3Y93_02160 b864d2d06d54dbbf35fcfbd8adfe5c7f 137 SUPERFAMILY SSF54197 1 137 1.52E-39 T 14-10-2018 IPR036265 HIT-like superfamily C3Y93_08825 8f2439779f068403bcf98a8cb8a2c533 509 SUPERFAMILY SSF53720 17 505 1.07E-126 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3Y93_08825 8f2439779f068403bcf98a8cb8a2c533 509 Gene3D G3DSA:3.40.605.10 47 501 1.0E-131 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C3Y93_08825 8f2439779f068403bcf98a8cb8a2c533 509 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 273 280 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 C3Y93_08825 8f2439779f068403bcf98a8cb8a2c533 509 Gene3D G3DSA:3.40.309.10 277 477 1.0E-131 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C3Y93_08825 8f2439779f068403bcf98a8cb8a2c533 509 Pfam PF00171 Aldehyde dehydrogenase family 47 504 2.8E-125 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3Y93_12795 2d333ca9c994a0ba1dd527603d956b88 154 SUPERFAMILY SSF47240 1 154 8.7E-47 T 14-10-2018 IPR009078 Ferritin-like superfamily C3Y93_12795 2d333ca9c994a0ba1dd527603d956b88 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 5.6E-47 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_12795 2d333ca9c994a0ba1dd527603d956b88 154 PRINTS PR00601 Bacterioferritin signature 3 22 3.0E-41 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_12795 2d333ca9c994a0ba1dd527603d956b88 154 PRINTS PR00601 Bacterioferritin signature 106 126 3.0E-41 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_12795 2d333ca9c994a0ba1dd527603d956b88 154 PRINTS PR00601 Bacterioferritin signature 23 43 3.0E-41 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_12795 2d333ca9c994a0ba1dd527603d956b88 154 PRINTS PR00601 Bacterioferritin signature 44 64 3.0E-41 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_12795 2d333ca9c994a0ba1dd527603d956b88 154 PRINTS PR00601 Bacterioferritin signature 128 149 3.0E-41 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_12795 2d333ca9c994a0ba1dd527603d956b88 154 PRINTS PR00601 Bacterioferritin signature 85 105 3.0E-41 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_12795 2d333ca9c994a0ba1dd527603d956b88 154 Gene3D G3DSA:1.20.1260.10 1 154 4.1E-60 T 14-10-2018 IPR012347 Ferritin-like C3Y93_12795 2d333ca9c994a0ba1dd527603d956b88 154 PIRSF PIRSF002560 1 154 9.2E-61 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C3Y93_12795 2d333ca9c994a0ba1dd527603d956b88 154 Pfam PF00210 Ferritin-like domain 9 143 1.4E-34 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 C3Y93_05595 c207feacde083a5768821d153e6eb047 394 Gene3D G3DSA:1.20.1720.10 8 388 3.3E-100 T 14-10-2018 C3Y93_05595 c207feacde083a5768821d153e6eb047 394 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 378 3.6E-88 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 C3Y93_05595 c207feacde083a5768821d153e6eb047 394 Pfam PF07690 Major Facilitator Superfamily 13 355 3.1E-41 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_05595 c207feacde083a5768821d153e6eb047 394 SUPERFAMILY SSF103473 4 389 1.29E-58 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_08885 323b6abaa06d647be6cb0df5a7e913c3 278 SUPERFAMILY SSF56112 12 263 3.93E-33 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3Y93_08885 323b6abaa06d647be6cb0df5a7e913c3 278 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 10 256 3.1E-109 T 14-10-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 C3Y93_09825 45194418efd0015afe137aef87cdde42 175 Gene3D G3DSA:3.40.50.2020 1 174 3.2E-63 T 14-10-2018 C3Y93_09825 45194418efd0015afe137aef87cdde42 175 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 8.4E-68 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 C3Y93_09825 45194418efd0015afe137aef87cdde42 175 Pfam PF00156 Phosphoribosyl transferase domain 14 160 1.1E-25 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C3Y93_09825 45194418efd0015afe137aef87cdde42 175 SUPERFAMILY SSF53271 6 173 3.15E-51 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3Y93_10790 28a1c0cdf2ff97749266bb8e207d50ba 447 Gene3D G3DSA:2.40.160.10 12 447 2.7E-130 T 14-10-2018 IPR023614 Porin domain superfamily C3Y93_10790 28a1c0cdf2ff97749266bb8e207d50ba 447 Pfam PF03573 outer membrane porin, OprD family 30 445 4.5E-105 T 14-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 C3Y93_04025 4b6820f171ced553ba4a1ff37f90eaf9 550 Gene3D G3DSA:3.30.565.60 242 404 9.1E-21 T 14-10-2018 IPR038475 RecG, C-terminal domain superfamily C3Y93_04025 4b6820f171ced553ba4a1ff37f90eaf9 550 Gene3D G3DSA:3.30.950.30 3 146 4.3E-24 T 14-10-2018 IPR038461 Schlafen, AAA domain superfamily C3Y93_04025 4b6820f171ced553ba4a1ff37f90eaf9 550 Pfam PF04326 Putative DNA-binding domain 18 140 6.5E-21 T 14-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 C3Y93_04025 4b6820f171ced553ba4a1ff37f90eaf9 550 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 325 401 2.9E-9 T 14-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain C3Y93_13810 5ac9c108dc22f0ecc7526534163d6571 348 Gene3D G3DSA:3.40.1030.10 71 348 2.9E-100 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3Y93_13810 5ac9c108dc22f0ecc7526534163d6571 348 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 335 4.5E-116 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 C3Y93_13810 5ac9c108dc22f0ecc7526534163d6571 348 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 339 37.876 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 C3Y93_13810 5ac9c108dc22f0ecc7526534163d6571 348 SUPERFAMILY SSF52418 75 342 3.01E-85 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3Y93_13810 5ac9c108dc22f0ecc7526534163d6571 348 SUPERFAMILY SSF47648 1 70 3.53E-20 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3Y93_13810 5ac9c108dc22f0ecc7526534163d6571 348 Gene3D G3DSA:1.20.970.10 1 70 1.1E-31 T 14-10-2018 C3Y93_13810 5ac9c108dc22f0ecc7526534163d6571 348 Pfam PF00591 Glycosyl transferase family, a/b domain 77 330 1.7E-99 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3Y93_13810 5ac9c108dc22f0ecc7526534163d6571 348 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 66 9.5E-19 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 C3Y93_13215 d0a21ee1ad8d5590ec72ff1cad094df4 158 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site C3Y93_13215 d0a21ee1ad8d5590ec72ff1cad094df4 158 Pfam PF01668 SmpB protein 15 157 1.8E-55 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 C3Y93_13215 d0a21ee1ad8d5590ec72ff1cad094df4 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 2.0E-62 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 C3Y93_13215 d0a21ee1ad8d5590ec72ff1cad094df4 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 68.425 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 C3Y93_13215 d0a21ee1ad8d5590ec72ff1cad094df4 158 SUPERFAMILY SSF74982 9 139 1.12E-48 T 14-10-2018 IPR023620 Small protein B C3Y93_13215 d0a21ee1ad8d5590ec72ff1cad094df4 158 Gene3D G3DSA:2.40.280.10 7 136 1.7E-45 T 14-10-2018 IPR023620 Small protein B C3Y93_13215 d0a21ee1ad8d5590ec72ff1cad094df4 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 156 1.2E-49 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 C3Y93_13640 4d653dda4354baa99ca3c84dade9ef3b 180 SUPERFAMILY SSF53271 4 157 9.12E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3Y93_13640 4d653dda4354baa99ca3c84dade9ef3b 180 Pfam PF00156 Phosphoribosyl transferase domain 50 169 2.5E-16 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C3Y93_13640 4d653dda4354baa99ca3c84dade9ef3b 180 Gene3D G3DSA:3.40.50.2020 2 172 2.2E-40 T 14-10-2018 C3Y93_08165 65b1b706fa4d3886693bdd1089a5b9b5 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 C3Y93_08165 65b1b706fa4d3886693bdd1089a5b9b5 127 SUPERFAMILY SSF55298 1 126 9.11E-45 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 C3Y93_08165 65b1b706fa4d3886693bdd1089a5b9b5 127 Gene3D G3DSA:3.30.1330.40 3 126 9.3E-51 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 C3Y93_08165 65b1b706fa4d3886693bdd1089a5b9b5 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 123 3.3E-48 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 C3Y93_08165 65b1b706fa4d3886693bdd1089a5b9b5 127 Pfam PF01042 Endoribonuclease L-PSP 8 124 1.9E-37 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 C3Y93_08945 f43ba380d2e5dd332878f7fda91e6714 257 SUPERFAMILY SSF52540 70 241 4.56E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_08945 f43ba380d2e5dd332878f7fda91e6714 257 Gene3D G3DSA:3.40.50.300 65 250 3.4E-46 T 14-10-2018 C3Y93_08945 f43ba380d2e5dd332878f7fda91e6714 257 PIRSF PIRSF003073 1 255 1.3E-74 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein C3Y93_08945 f43ba380d2e5dd332878f7fda91e6714 257 Pfam PF01695 IstB-like ATP binding protein 56 234 3.3E-58 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 C3Y93_08945 f43ba380d2e5dd332878f7fda91e6714 257 SMART SM00382 100 237 1.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_04585 f43ba380d2e5dd332878f7fda91e6714 257 SUPERFAMILY SSF52540 70 241 4.56E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_04585 f43ba380d2e5dd332878f7fda91e6714 257 Gene3D G3DSA:3.40.50.300 65 250 3.4E-46 T 14-10-2018 C3Y93_04585 f43ba380d2e5dd332878f7fda91e6714 257 PIRSF PIRSF003073 1 255 1.3E-74 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein C3Y93_04585 f43ba380d2e5dd332878f7fda91e6714 257 Pfam PF01695 IstB-like ATP binding protein 56 234 3.3E-58 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 C3Y93_04585 f43ba380d2e5dd332878f7fda91e6714 257 SMART SM00382 100 237 1.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_07160 fdc83240143d613f67af6a2a60f4897d 422 SUPERFAMILY SSF55874 237 406 9.69E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_07160 fdc83240143d613f67af6a2a60f4897d 422 Gene3D G3DSA:1.10.287.130 155 245 2.4E-9 T 14-10-2018 C3Y93_07160 fdc83240143d613f67af6a2a60f4897d 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 404 3.1E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_07160 fdc83240143d613f67af6a2a60f4897d 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 403 9.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_07160 fdc83240143d613f67af6a2a60f4897d 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 345 9.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_07160 fdc83240143d613f67af6a2a60f4897d 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 9.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_07160 fdc83240143d613f67af6a2a60f4897d 422 SMART SM00387 292 406 5.3E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_07160 fdc83240143d613f67af6a2a60f4897d 422 SMART SM00388 179 247 4.8E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_07160 fdc83240143d613f67af6a2a60f4897d 422 SUPERFAMILY SSF47384 165 248 1.02E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3Y93_07160 fdc83240143d613f67af6a2a60f4897d 422 Gene3D G3DSA:3.30.565.10 254 411 2.2E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_12820 a2652affa782ce0c6303a66bb0cb79e0 216 Gene3D G3DSA:3.40.50.300 1 207 5.0E-56 T 14-10-2018 C3Y93_12820 a2652affa782ce0c6303a66bb0cb79e0 216 SUPERFAMILY SSF52540 1 199 2.09E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_12820 a2652affa782ce0c6303a66bb0cb79e0 216 Pfam PF13500 AAA domain 5 214 2.2E-33 T 14-10-2018 C3Y93_12820 a2652affa782ce0c6303a66bb0cb79e0 216 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 216 25.34 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 C3Y93_12820 a2652affa782ce0c6303a66bb0cb79e0 216 PIRSF PIRSF006755 2 215 3.1E-59 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 C3Y93_12820 a2652affa782ce0c6303a66bb0cb79e0 216 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 176 9.5E-50 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 C3Y93_11255 5cb5cd172143ce0300dab2da0b1c2d0c 264 Gene3D G3DSA:3.10.129.90 6 263 1.8E-58 T 14-10-2018 C3Y93_11255 5cb5cd172143ce0300dab2da0b1c2d0c 264 SUPERFAMILY SSF54637 122 262 2.08E-20 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_11255 5cb5cd172143ce0300dab2da0b1c2d0c 264 SUPERFAMILY SSF54637 16 108 7.71E-16 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_11255 5cb5cd172143ce0300dab2da0b1c2d0c 264 Pfam PF13622 Thioesterase-like superfamily 21 262 8.7E-41 T 14-10-2018 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 303 311 2.1E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 156 163 2.1E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 214 233 2.1E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 SUPERFAMILY SSF54292 9 101 1.15E-27 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 SUPERFAMILY SSF63380 78 207 5.02E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 SUPERFAMILY SSF52343 207 335 1.26E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 Pfam PF00175 Oxidoreductase NAD-binding domain 215 317 7.4E-23 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 Pfam PF00970 Oxidoreductase FAD-binding domain 111 205 1.7E-20 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 Gene3D G3DSA:2.40.30.10 103 202 2.1E-25 T 14-10-2018 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 88 1.5E-16 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 199 208 2.6E-24 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 156 163 2.6E-24 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 139 151 2.6E-24 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 214 233 2.6E-24 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 239 248 2.6E-24 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 2.6E-24 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 Gene3D G3DSA:3.10.20.30 1 102 4.0E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C3Y93_02675 9ccd64321b85fdb4538ac37af10004db 338 Gene3D G3DSA:3.40.50.80 203 335 1.7E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C3Y93_01360 1b34716c415d3a77ca2ee6b60d61d7cf 200 SUPERFAMILY SSF142695 2 173 6.8E-63 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3Y93_01360 1b34716c415d3a77ca2ee6b60d61d7cf 200 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 6 194 3.0E-76 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3Y93_01360 1b34716c415d3a77ca2ee6b60d61d7cf 200 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 197 43.749 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3Y93_01360 1b34716c415d3a77ca2ee6b60d61d7cf 200 Pfam PF00925 GTP cyclohydrolase II 8 171 5.6E-67 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3Y93_01360 1b34716c415d3a77ca2ee6b60d61d7cf 200 Gene3D G3DSA:3.40.50.10990 1 175 8.5E-73 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3Y93_12510 d5b5f79e924f32ff8b32089aea6c4be7 148 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 26 145 3.0E-26 T 14-10-2018 IPR019223 Domain of unknown function DUF2147 C3Y93_12510 d5b5f79e924f32ff8b32089aea6c4be7 148 Gene3D G3DSA:2.40.128.520 21 148 3.9E-19 T 14-10-2018 C3Y93_00710 a69b037282eca2c182f734c4c3adcecb 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 259 1.2E-50 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3Y93_00710 a69b037282eca2c182f734c4c3adcecb 265 Gene3D G3DSA:3.90.226.10 1 202 2.1E-64 T 14-10-2018 C3Y93_00710 a69b037282eca2c182f734c4c3adcecb 265 Gene3D G3DSA:1.10.12.10 204 265 1.1E-20 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal C3Y93_00710 a69b037282eca2c182f734c4c3adcecb 265 SUPERFAMILY SSF52096 1 259 4.39E-74 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_05270 ff75e9ddf9e95ac9ac12ff8bea7efd8b 444 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 128 4.0E-35 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 C3Y93_05270 ff75e9ddf9e95ac9ac12ff8bea7efd8b 444 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 352 364 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site C3Y93_05270 ff75e9ddf9e95ac9ac12ff8bea7efd8b 444 SMART SM01011 4 141 3.8E-56 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 C3Y93_05270 ff75e9ddf9e95ac9ac12ff8bea7efd8b 444 SUPERFAMILY SSF55920 180 439 1.7E-85 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like C3Y93_05270 ff75e9ddf9e95ac9ac12ff8bea7efd8b 444 Pfam PF00557 Metallopeptidase family M24 185 416 1.7E-62 T 14-10-2018 IPR000994 Peptidase M24 C3Y93_05270 ff75e9ddf9e95ac9ac12ff8bea7efd8b 444 Gene3D G3DSA:3.90.230.10 177 444 5.1E-99 T 14-10-2018 C3Y93_05270 ff75e9ddf9e95ac9ac12ff8bea7efd8b 444 Gene3D G3DSA:3.40.350.10 4 176 2.5E-52 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal C3Y93_05270 ff75e9ddf9e95ac9ac12ff8bea7efd8b 444 SUPERFAMILY SSF53092 4 179 2.88E-48 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal C3Y93_11910 9260b409114e8b1e986e383cec566aa6 359 SMART SM01329 4 354 5.0E-198 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 C3Y93_11910 9260b409114e8b1e986e383cec566aa6 359 SUPERFAMILY SSF53659 1 358 1.98E-118 T 14-10-2018 C3Y93_11910 9260b409114e8b1e986e383cec566aa6 359 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 358 51.244 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 C3Y93_11910 9260b409114e8b1e986e383cec566aa6 359 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 354 7.0E-135 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 C3Y93_11910 9260b409114e8b1e986e383cec566aa6 359 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 C3Y93_11910 9260b409114e8b1e986e383cec566aa6 359 Gene3D G3DSA:3.40.718.10 2 359 2.8E-144 T 14-10-2018 C3Y93_11910 9260b409114e8b1e986e383cec566aa6 359 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 353 1.6E-154 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 C3Y93_07530 6dc798d36388e1bd755a012be59dc30e 260 Pfam PF05742 Transport and Golgi organisation 2 1 242 5.7E-55 T 14-10-2018 IPR008551 Transport and Golgi organisation protein 2 C3Y93_09950 9244fa14fe901baf73352de315df7bc5 227 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 8 227 1.6E-63 T 14-10-2018 IPR026387 Outer membrane protein C3Y93_09295 66aea8aaa830ceb6e3ad2e35576eabed 226 SUPERFAMILY SSF47616 86 206 7.39E-17 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C3Y93_09295 66aea8aaa830ceb6e3ad2e35576eabed 226 SUPERFAMILY SSF52833 1 90 1.01E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_09295 66aea8aaa830ceb6e3ad2e35576eabed 226 Pfam PF13410 Glutathione S-transferase, C-terminal domain 138 207 3.6E-6 T 14-10-2018 C3Y93_09295 66aea8aaa830ceb6e3ad2e35576eabed 226 Gene3D G3DSA:3.40.30.10 4 205 1.2E-61 T 14-10-2018 C3Y93_09295 66aea8aaa830ceb6e3ad2e35576eabed 226 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 84 1.8E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C3Y93_09295 66aea8aaa830ceb6e3ad2e35576eabed 226 Gene3D G3DSA:1.20.1050.10 87 198 1.2E-61 T 14-10-2018 C3Y93_13620 d5dfe1bf3a0368d36e224311896676f5 301 Gene3D G3DSA:3.40.190.10 165 265 1.0E-51 T 14-10-2018 C3Y93_13620 d5dfe1bf3a0368d36e224311896676f5 301 Gene3D G3DSA:3.40.190.10 95 294 1.0E-51 T 14-10-2018 C3Y93_13620 d5dfe1bf3a0368d36e224311896676f5 301 Pfam PF03466 LysR substrate binding domain 91 295 2.0E-38 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_13620 d5dfe1bf3a0368d36e224311896676f5 301 SUPERFAMILY SSF53850 92 298 1.36E-30 T 14-10-2018 C3Y93_13620 d5dfe1bf3a0368d36e224311896676f5 301 Gene3D G3DSA:1.10.10.10 3 88 1.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_13620 d5dfe1bf3a0368d36e224311896676f5 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.9E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_13620 d5dfe1bf3a0368d36e224311896676f5 301 SUPERFAMILY SSF46785 5 115 2.73E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_03375 6dbe19d3c2e1b7a90ee34be9c7ba5e5f 378 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 33 378 9.3E-119 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_03375 6dbe19d3c2e1b7a90ee34be9c7ba5e5f 378 Pfam PF01098 Cell cycle protein 37 377 4.6E-99 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_03375 6dbe19d3c2e1b7a90ee34be9c7ba5e5f 378 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 27 378 25.463 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C3Y93_12865 25014956d5cd7829556a535e525aad12 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 6.7E-5 T 14-10-2018 C3Y93_12865 25014956d5cd7829556a535e525aad12 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12865 25014956d5cd7829556a535e525aad12 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12865 25014956d5cd7829556a535e525aad12 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12865 25014956d5cd7829556a535e525aad12 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.9E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12865 25014956d5cd7829556a535e525aad12 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.9E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12865 25014956d5cd7829556a535e525aad12 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.9E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12865 25014956d5cd7829556a535e525aad12 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.9E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12865 25014956d5cd7829556a535e525aad12 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.9E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12865 25014956d5cd7829556a535e525aad12 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.9E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12865 25014956d5cd7829556a535e525aad12 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3Y93_12865 25014956d5cd7829556a535e525aad12 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.4E-94 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C3Y93_12865 25014956d5cd7829556a535e525aad12 244 Gene3D G3DSA:3.40.50.720 1 244 5.0E-81 T 14-10-2018 C3Y93_12865 25014956d5cd7829556a535e525aad12 244 SUPERFAMILY SSF51735 5 243 5.75E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_12865 25014956d5cd7829556a535e525aad12 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 2.1E-65 T 14-10-2018 C3Y93_13705 e9edb3a010912ec9de33d53c3649794e 143 Gene3D G3DSA:3.40.1260.10 22 138 1.2E-13 T 14-10-2018 IPR027396 DsrEFH-like C3Y93_13705 e9edb3a010912ec9de33d53c3649794e 143 Pfam PF02635 DsrE/DsrF-like family 35 121 1.4E-8 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein C3Y93_13705 e9edb3a010912ec9de33d53c3649794e 143 SUPERFAMILY SSF75169 34 136 4.21E-15 T 14-10-2018 IPR027396 DsrEFH-like C3Y93_13125 f1a7b0c11a63433a5ef03b0be961d937 161 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 2.4E-14 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 C3Y93_02515 957b7158a8a4f3b4440f90768877e406 371 SUPERFAMILY SSF50129 1 184 4.72E-71 T 14-10-2018 IPR011032 GroES-like superfamily C3Y93_02515 957b7158a8a4f3b4440f90768877e406 371 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 C3Y93_02515 957b7158a8a4f3b4440f90768877e406 371 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 4.7E-26 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C3Y93_02515 957b7158a8a4f3b4440f90768877e406 371 SMART SM00829 12 367 1.5E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C3Y93_02515 957b7158a8a4f3b4440f90768877e406 371 SUPERFAMILY SSF50129 318 369 1.98E-11 T 14-10-2018 IPR011032 GroES-like superfamily C3Y93_02515 957b7158a8a4f3b4440f90768877e406 371 Pfam PF00107 Zinc-binding dehydrogenase 197 330 7.3E-24 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C3Y93_02515 957b7158a8a4f3b4440f90768877e406 371 SUPERFAMILY SSF51735 161 333 2.63E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_02515 957b7158a8a4f3b4440f90768877e406 371 Gene3D G3DSA:3.90.180.10 6 364 4.5E-149 T 14-10-2018 C3Y93_02515 957b7158a8a4f3b4440f90768877e406 371 Gene3D G3DSA:3.40.50.720 174 312 4.5E-149 T 14-10-2018 C3Y93_02515 957b7158a8a4f3b4440f90768877e406 371 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 6.3E-221 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 C3Y93_02680 a6bd9407298b40979bd1a74e6f9af3c0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.1E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02680 a6bd9407298b40979bd1a74e6f9af3c0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.1E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02680 a6bd9407298b40979bd1a74e6f9af3c0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.1E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02680 a6bd9407298b40979bd1a74e6f9af3c0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02680 a6bd9407298b40979bd1a74e6f9af3c0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02680 a6bd9407298b40979bd1a74e6f9af3c0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02680 a6bd9407298b40979bd1a74e6f9af3c0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02680 a6bd9407298b40979bd1a74e6f9af3c0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02680 a6bd9407298b40979bd1a74e6f9af3c0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02680 a6bd9407298b40979bd1a74e6f9af3c0 261 Pfam PF00106 short chain dehydrogenase 10 192 7.9E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_02680 a6bd9407298b40979bd1a74e6f9af3c0 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3Y93_02680 a6bd9407298b40979bd1a74e6f9af3c0 261 SUPERFAMILY SSF51735 8 258 1.47E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_02680 a6bd9407298b40979bd1a74e6f9af3c0 261 Gene3D G3DSA:3.40.50.720 1 260 7.1E-69 T 14-10-2018 C3Y93_01090 888364d79f48faeea284a46e68106921 572 SUPERFAMILY SSF51905 5 532 4.86E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_01090 888364d79f48faeea284a46e68106921 572 Gene3D G3DSA:3.50.50.60 451 534 1.0E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_01090 888364d79f48faeea284a46e68106921 572 Gene3D G3DSA:3.50.50.60 168 330 8.2E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_01090 888364d79f48faeea284a46e68106921 572 Pfam PF05199 GMC oxidoreductase 468 526 1.6E-17 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 C3Y93_01090 888364d79f48faeea284a46e68106921 572 Gene3D G3DSA:3.50.50.60 6 166 5.0E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_01090 888364d79f48faeea284a46e68106921 572 Pfam PF00732 GMC oxidoreductase 8 283 7.3E-12 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 C3Y93_11825 7d360ec987e1d4b2183e24030fa65aa6 302 SUPERFAMILY SSF103481 46 145 3.01E-8 T 14-10-2018 C3Y93_11825 7d360ec987e1d4b2183e24030fa65aa6 302 Pfam PF00892 EamA-like transporter family 16 143 3.6E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_11825 7d360ec987e1d4b2183e24030fa65aa6 302 Pfam PF00892 EamA-like transporter family 154 290 3.6E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_11825 7d360ec987e1d4b2183e24030fa65aa6 302 SUPERFAMILY SSF103481 194 295 2.48E-14 T 14-10-2018 C3Y93_12715 15789da6a28b8d64bde0d3c1b32230b8 125 Pfam PF06877 Regulator of ribonuclease activity B 11 110 1.3E-27 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain C3Y93_12715 15789da6a28b8d64bde0d3c1b32230b8 125 SUPERFAMILY SSF89946 3 120 1.02E-31 T 14-10-2018 IPR036701 RraB-like superfamily C3Y93_12715 15789da6a28b8d64bde0d3c1b32230b8 125 Gene3D G3DSA:3.30.70.970 2 124 7.3E-9 T 14-10-2018 IPR036701 RraB-like superfamily C3Y93_10340 52bcf4bb6477cdb0e47131145db592d4 278 Gene3D G3DSA:3.40.50.300 1 278 2.1E-64 T 14-10-2018 C3Y93_10340 52bcf4bb6477cdb0e47131145db592d4 278 Pfam PF13614 AAA domain 4 205 6.2E-41 T 14-10-2018 IPR025669 AAA domain C3Y93_10340 52bcf4bb6477cdb0e47131145db592d4 278 SUPERFAMILY SSF52540 4 277 1.06E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_05970 fc29249618bf0ba95a369c83d67e0347 377 Gene3D G3DSA:2.40.160.60 13 377 9.2E-30 T 14-10-2018 C3Y93_05970 fc29249618bf0ba95a369c83d67e0347 377 SUPERFAMILY SSF56935 23 377 1.5E-47 T 14-10-2018 C3Y93_05970 fc29249618bf0ba95a369c83d67e0347 377 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 55 353 3.7E-14 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) C3Y93_05040 9d0fe21616593258c89fd1051c8e269d 238 SUPERFAMILY SSF88697 1 68 2.49E-17 T 14-10-2018 IPR015947 PUA-like superfamily C3Y93_05040 9d0fe21616593258c89fd1051c8e269d 238 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 1 236 1.5E-60 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 C3Y93_05040 9d0fe21616593258c89fd1051c8e269d 238 Gene3D G3DSA:3.40.1280.10 74 238 9.0E-51 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3Y93_05040 9d0fe21616593258c89fd1051c8e269d 238 SUPERFAMILY SSF75217 74 236 1.92E-46 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3Y93_05040 9d0fe21616593258c89fd1051c8e269d 238 Pfam PF04452 RNA methyltransferase 16 234 7.1E-67 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 C3Y93_05040 9d0fe21616593258c89fd1051c8e269d 238 Gene3D G3DSA:2.40.240.20 1 68 3.0E-22 T 14-10-2018 C3Y93_05040 9d0fe21616593258c89fd1051c8e269d 238 PIRSF PIRSF015601 1 238 2.9E-60 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 C3Y93_12680 3b44ebda322c808a5ed906496de44a4c 592 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 40 53 3.3E-7 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 C3Y93_12680 3b44ebda322c808a5ed906496de44a4c 592 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 286 292 3.3E-7 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 C3Y93_12680 3b44ebda322c808a5ed906496de44a4c 592 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 54 66 3.3E-7 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 C3Y93_12680 3b44ebda322c808a5ed906496de44a4c 592 SUPERFAMILY SSF56672 39 287 1.33E-7 T 14-10-2018 C3Y93_12680 3b44ebda322c808a5ed906496de44a4c 592 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 45 291 1.5E-22 T 14-10-2018 IPR000477 Reverse transcriptase domain C3Y93_09985 56583de15a4d0cfb5d6b0b604662658b 561 SUPERFAMILY SSF52016 379 557 2.75E-58 T 14-10-2018 C3Y93_09985 56583de15a4d0cfb5d6b0b604662658b 561 Pfam PF00920 Dehydratase family 38 553 3.3E-207 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3Y93_09985 56583de15a4d0cfb5d6b0b604662658b 561 Gene3D G3DSA:3.50.30.80 378 528 8.2E-53 T 14-10-2018 C3Y93_09985 56583de15a4d0cfb5d6b0b604662658b 561 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 21 556 4.5E-220 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3Y93_09985 56583de15a4d0cfb5d6b0b604662658b 561 SUPERFAMILY SSF143975 5 376 5.49E-130 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3Y93_09985 56583de15a4d0cfb5d6b0b604662658b 561 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 464 475 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3Y93_09985 56583de15a4d0cfb5d6b0b604662658b 561 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 8 556 43.783 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3Y93_09985 56583de15a4d0cfb5d6b0b604662658b 561 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 126 136 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3Y93_05150 3ec9e051c65306e32f91d3964c9e0405 220 Pfam PF00929 Exonuclease 23 200 2.8E-30 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3Y93_05150 3ec9e051c65306e32f91d3964c9e0405 220 SMART SM00479 21 209 2.5E-21 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3Y93_05150 3ec9e051c65306e32f91d3964c9e0405 220 Gene3D G3DSA:3.30.420.10 12 211 7.4E-45 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_05150 3ec9e051c65306e32f91d3964c9e0405 220 Hamap MF_00157 Ribonuclease T [rnt]. 1 220 90.442 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 C3Y93_05150 3ec9e051c65306e32f91d3964c9e0405 220 SUPERFAMILY SSF53098 11 209 2.73E-51 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_05150 3ec9e051c65306e32f91d3964c9e0405 220 TIGRFAM TIGR01298 RNaseT: ribonuclease T 13 207 1.4E-83 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 C3Y93_06430 d6e42ca65fed0eacff9d7db7eaeb2527 273 Gene3D G3DSA:3.40.50.150 71 272 2.6E-60 T 14-10-2018 C3Y93_06430 d6e42ca65fed0eacff9d7db7eaeb2527 273 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 23 268 27.041 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 C3Y93_06430 d6e42ca65fed0eacff9d7db7eaeb2527 273 Pfam PF04445 Putative SAM-dependent methyltransferase 78 266 8.6E-49 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 C3Y93_06430 d6e42ca65fed0eacff9d7db7eaeb2527 273 SUPERFAMILY SSF53335 34 267 2.51E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_07790 bf27aad65e190f8a1e229ca1738931fd 212 Gene3D G3DSA:2.40.50.620 34 93 5.2E-14 T 14-10-2018 C3Y93_07790 bf27aad65e190f8a1e229ca1738931fd 212 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 1.7E-85 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07790 bf27aad65e190f8a1e229ca1738931fd 212 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.426 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07790 bf27aad65e190f8a1e229ca1738931fd 212 SUPERFAMILY SSF50447 2 211 1.06E-77 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C3Y93_07790 bf27aad65e190f8a1e229ca1738931fd 212 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site C3Y93_07790 bf27aad65e190f8a1e229ca1738931fd 212 Pfam PF00297 Ribosomal protein L3 49 185 1.0E-13 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07790 bf27aad65e190f8a1e229ca1738931fd 212 Gene3D G3DSA:2.40.30.10 132 212 2.3E-14 T 14-10-2018 C3Y93_11315 12fcfedf64c09d022bb32cd61968220a 107 Pfam PF06865 Protein of unknown function (DUF1255) 12 104 3.5E-33 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 C3Y93_11315 12fcfedf64c09d022bb32cd61968220a 107 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 11 106 25.433 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 C3Y93_11315 12fcfedf64c09d022bb32cd61968220a 107 SUPERFAMILY SSF51182 11 104 2.97E-31 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C3Y93_11315 12fcfedf64c09d022bb32cd61968220a 107 Gene3D G3DSA:2.60.120.10 1 107 4.1E-47 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3Y93_09055 fa4f2648c4fd4cf39e67a240c51ed6a9 383 Pfam PF01609 Transposase DDE domain 142 330 2.2E-23 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3Y93_09055 fa4f2648c4fd4cf39e67a240c51ed6a9 383 Pfam PF14294 Domain of unknown function (DUF4372) 3 76 4.7E-22 T 14-10-2018 IPR025399 Domain of unknown function DUF4372 C3Y93_09055 fa4f2648c4fd4cf39e67a240c51ed6a9 383 SUPERFAMILY SSF53098 92 346 4.4E-29 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_07745 80c2a6bcc587ae5131d7ac2e220712f2 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 25.171 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07745 80c2a6bcc587ae5131d7ac2e220712f2 85 SUPERFAMILY SSF50249 7 83 3.38E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_07745 80c2a6bcc587ae5131d7ac2e220712f2 85 Pfam PF00366 Ribosomal protein S17 11 78 1.9E-32 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07745 80c2a6bcc587ae5131d7ac2e220712f2 85 Gene3D G3DSA:2.40.50.140 2 84 1.3E-36 T 14-10-2018 C3Y93_07745 80c2a6bcc587ae5131d7ac2e220712f2 85 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 2.4E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07745 80c2a6bcc587ae5131d7ac2e220712f2 85 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 2.4E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07745 80c2a6bcc587ae5131d7ac2e220712f2 85 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 2.4E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07745 80c2a6bcc587ae5131d7ac2e220712f2 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 77 2.0E-31 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07745 80c2a6bcc587ae5131d7ac2e220712f2 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 77 1.9E-36 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_11780 75b6adfdc9c1d12cf4f1c278b8759188 286 Gene3D G3DSA:3.40.50.1820 18 284 3.7E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_11780 75b6adfdc9c1d12cf4f1c278b8759188 286 SUPERFAMILY SSF53474 7 280 2.57E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_11780 75b6adfdc9c1d12cf4f1c278b8759188 286 Pfam PF00561 alpha/beta hydrolase fold 40 141 2.8E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_11780 75b6adfdc9c1d12cf4f1c278b8759188 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 2.4E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_11780 75b6adfdc9c1d12cf4f1c278b8759188 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 67 82 2.4E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_11780 75b6adfdc9c1d12cf4f1c278b8759188 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 126 139 2.4E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_11780 75b6adfdc9c1d12cf4f1c278b8759188 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 226 240 2.4E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_00480 6622a0891bf0fece66de44736b9858fa 732 SUPERFAMILY SSF103473 19 418 2.49E-20 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_00480 6622a0891bf0fece66de44736b9858fa 732 Gene3D G3DSA:2.60.40.10 489 587 1.4E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold C3Y93_00480 6622a0891bf0fece66de44736b9858fa 732 Gene3D G3DSA:1.20.1250.20 77 416 1.0E-13 T 14-10-2018 C3Y93_00480 6622a0891bf0fece66de44736b9858fa 732 SUPERFAMILY SSF103473 625 721 3.92E-7 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_00480 6622a0891bf0fece66de44736b9858fa 732 Pfam PF07690 Major Facilitator Superfamily 33 418 1.9E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_06425 d7ff99c556bd998238cf3c725043b8fb 469 Pfam PF01650 Peptidase C13 family 229 436 9.9E-39 T 14-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 C3Y93_06425 d7ff99c556bd998238cf3c725043b8fb 469 Gene3D G3DSA:3.40.50.1460 279 428 2.5E-9 T 14-10-2018 C3Y93_06425 d7ff99c556bd998238cf3c725043b8fb 469 SUPERFAMILY SSF52129 282 418 1.92E-6 T 14-10-2018 IPR029030 Caspase-like domain superfamily C3Y93_11785 be6f54062374029024949a3548ecac39 225 Pfam PF07077 Protein of unknown function (DUF1345) 42 214 6.4E-54 T 14-10-2018 IPR009781 Protein of unknown function DUF1345 C3Y93_03685 80d69ed085779a4ca4e026b20a50ec94 933 Gene3D G3DSA:3.10.20.310 349 436 3.6E-18 T 14-10-2018 C3Y93_03685 80d69ed085779a4ca4e026b20a50ec94 933 Gene3D G3DSA:2.40.160.50 601 933 5.0E-93 T 14-10-2018 C3Y93_03685 80d69ed085779a4ca4e026b20a50ec94 933 Pfam PF17243 POTRA domain TamA domain 1 285 347 2.7E-7 T 14-10-2018 IPR035243 TamA, POTRA domain 1 C3Y93_03685 80d69ed085779a4ca4e026b20a50ec94 933 Pfam PF01103 Surface antigen 629 931 2.6E-36 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 C3Y93_02505 544dac580b7fd5e62392a3b9df878e31 396 Gene3D G3DSA:1.20.1250.20 8 198 1.3E-24 T 14-10-2018 C3Y93_02505 544dac580b7fd5e62392a3b9df878e31 396 Gene3D G3DSA:1.20.1250.20 211 394 7.3E-24 T 14-10-2018 C3Y93_02505 544dac580b7fd5e62392a3b9df878e31 396 Pfam PF07690 Major Facilitator Superfamily 19 352 2.7E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_02505 544dac580b7fd5e62392a3b9df878e31 396 SUPERFAMILY SSF103473 11 389 3.53E-60 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_09420 ea05ffc8a9fa7162a97308d3df3974d7 239 Gene3D G3DSA:1.10.357.10 83 221 2.1E-11 T 14-10-2018 C3Y93_09420 ea05ffc8a9fa7162a97308d3df3974d7 239 SUPERFAMILY SSF46689 30 105 6.67E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_09420 ea05ffc8a9fa7162a97308d3df3974d7 239 Gene3D G3DSA:1.10.10.60 8 82 2.0E-12 T 14-10-2018 C3Y93_09420 ea05ffc8a9fa7162a97308d3df3974d7 239 Pfam PF00440 Bacterial regulatory proteins, tetR family 40 84 9.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_11875 83fbde49088a1dfb588aebafddd2e0b0 216 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 186 8.2E-20 T 14-10-2018 C3Y93_11875 83fbde49088a1dfb588aebafddd2e0b0 216 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 199 5.5E-39 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like C3Y93_11875 83fbde49088a1dfb588aebafddd2e0b0 216 SUPERFAMILY SSF56784 1 212 2.84E-33 T 14-10-2018 IPR036412 HAD-like superfamily C3Y93_11875 83fbde49088a1dfb588aebafddd2e0b0 216 Gene3D G3DSA:3.40.50.1000 3 211 9.3E-70 T 14-10-2018 IPR023214 HAD superfamily C3Y93_11875 83fbde49088a1dfb588aebafddd2e0b0 216 Gene3D G3DSA:1.20.1440.100 15 88 9.3E-70 T 14-10-2018 C3Y93_11875 83fbde49088a1dfb588aebafddd2e0b0 216 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 183 1.0E-33 T 14-10-2018 C3Y93_08090 552cd4602b29ff02a1fa239c97ace0cb 123 Gene3D G3DSA:2.30.30.790 10 121 2.1E-15 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_08090 552cd4602b29ff02a1fa239c97ace0cb 123 PIRSF PIRSF002191 1 123 9.9E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_08090 552cd4602b29ff02a1fa239c97ace0cb 123 PRINTS PR00061 Ribosomal protein L19 signature 37 66 2.2E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_08090 552cd4602b29ff02a1fa239c97ace0cb 123 PRINTS PR00061 Ribosomal protein L19 signature 91 116 2.2E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_08090 552cd4602b29ff02a1fa239c97ace0cb 123 PRINTS PR00061 Ribosomal protein L19 signature 7 36 2.2E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_08090 552cd4602b29ff02a1fa239c97ace0cb 123 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_08090 552cd4602b29ff02a1fa239c97ace0cb 123 Pfam PF01245 Ribosomal protein L19 7 116 7.9E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_08090 552cd4602b29ff02a1fa239c97ace0cb 123 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 7 116 1.7E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_08090 552cd4602b29ff02a1fa239c97ace0cb 123 SUPERFAMILY SSF50104 6 118 1.1E-46 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C3Y93_08090 552cd4602b29ff02a1fa239c97ace0cb 123 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 5 117 30.85 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_01035 044706ba38a20cfe78f8bab4a85db3d0 399 Gene3D G3DSA:1.10.150.130 97 208 4.6E-19 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C3Y93_01035 044706ba38a20cfe78f8bab4a85db3d0 399 Gene3D G3DSA:1.10.443.10 209 379 1.6E-12 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3Y93_01035 044706ba38a20cfe78f8bab4a85db3d0 399 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 101 152 5.2E-6 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 C3Y93_01035 044706ba38a20cfe78f8bab4a85db3d0 399 Gene3D G3DSA:3.30.160.390 6 88 5.0E-19 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily C3Y93_01035 044706ba38a20cfe78f8bab4a85db3d0 399 Pfam PF13356 Arm DNA-binding domain 7 76 1.7E-11 T 14-10-2018 IPR025166 Integrase, DNA-binding domain C3Y93_01035 044706ba38a20cfe78f8bab4a85db3d0 399 SUPERFAMILY SSF56349 101 382 2.47E-45 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3Y93_01035 044706ba38a20cfe78f8bab4a85db3d0 399 Pfam PF00589 Phage integrase family 212 361 2.2E-13 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3Y93_06375 a2760c17061c5499c8ada9bd113c2d6d 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.1E-28 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 C3Y93_06375 a2760c17061c5499c8ada9bd113c2d6d 105 Gene3D G3DSA:1.10.3730.20 1 105 2.2E-32 T 14-10-2018 C3Y93_06375 a2760c17061c5499c8ada9bd113c2d6d 105 SUPERFAMILY SSF103481 5 104 2.88E-21 T 14-10-2018 C3Y93_13350 6e8a3eb309ff6316ff40a2bf2898f02b 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 8.8E-59 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 C3Y93_13350 6e8a3eb309ff6316ff40a2bf2898f02b 158 SUPERFAMILY SSF46557 3 78 6.8E-28 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 C3Y93_13350 6e8a3eb309ff6316ff40a2bf2898f02b 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.801 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 C3Y93_13350 6e8a3eb309ff6316ff40a2bf2898f02b 158 Gene3D G3DSA:3.10.50.30 76 158 6.1E-32 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 C3Y93_13350 6e8a3eb309ff6316ff40a2bf2898f02b 158 PIRSF PIRSF006092 1 158 1.4E-53 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 C3Y93_13350 6e8a3eb309ff6316ff40a2bf2898f02b 158 Gene3D G3DSA:1.10.287.180 1 75 1.5E-30 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 C3Y93_13350 6e8a3eb309ff6316ff40a2bf2898f02b 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 C3Y93_13350 6e8a3eb309ff6316ff40a2bf2898f02b 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 157 8.4E-29 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 C3Y93_13350 6e8a3eb309ff6316ff40a2bf2898f02b 158 SUPERFAMILY SSF54534 82 157 2.09E-24 T 14-10-2018 C3Y93_13350 6e8a3eb309ff6316ff40a2bf2898f02b 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 8.7E-31 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 C3Y93_13350 6e8a3eb309ff6316ff40a2bf2898f02b 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 C3Y93_06445 54a16b8b95733105c8f00ad56ca8bb78 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 123 6.0E-10 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_06445 54a16b8b95733105c8f00ad56ca8bb78 176 Gene3D G3DSA:2.160.10.10 1 173 2.5E-62 T 14-10-2018 C3Y93_06445 54a16b8b95733105c8f00ad56ca8bb78 176 SUPERFAMILY SSF51161 20 170 7.62E-45 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3Y93_07920 9f41eec96513d4816da81d14de4543a5 200 Gene3D G3DSA:3.40.50.10990 2 175 3.6E-73 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3Y93_07920 9f41eec96513d4816da81d14de4543a5 200 Pfam PF00925 GTP cyclohydrolase II 7 171 2.4E-66 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3Y93_07920 9f41eec96513d4816da81d14de4543a5 200 SUPERFAMILY SSF142695 3 174 3.66E-62 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3Y93_07920 9f41eec96513d4816da81d14de4543a5 200 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 6 194 1.8E-77 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3Y93_07920 9f41eec96513d4816da81d14de4543a5 200 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 197 43.73 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3Y93_08130 187e082953131cbaff78f6188192b7eb 322 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 3.9E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_08130 187e082953131cbaff78f6188192b7eb 322 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_08130 187e082953131cbaff78f6188192b7eb 322 Pfam PF16074 Type IV Pilus-assembly protein W 172 316 9.8E-14 T 14-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 C3Y93_08130 187e082953131cbaff78f6188192b7eb 322 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 28 8.3E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_08130 187e082953131cbaff78f6188192b7eb 322 SUPERFAMILY SSF54523 9 91 7.61E-7 T 14-10-2018 C3Y93_05705 0d7b3c84c62b16eb6a87624d9e21806a 178 Gene3D G3DSA:2.30.30.40 34 153 3.4E-21 T 14-10-2018 C3Y93_05705 0d7b3c84c62b16eb6a87624d9e21806a 178 SMART SM00260 27 164 4.9E-7 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3Y93_05705 0d7b3c84c62b16eb6a87624d9e21806a 178 Pfam PF01584 CheW-like domain 33 157 2.8E-23 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3Y93_05705 0d7b3c84c62b16eb6a87624d9e21806a 178 Gene3D G3DSA:2.40.50.180 50 116 3.4E-21 T 14-10-2018 C3Y93_05705 0d7b3c84c62b16eb6a87624d9e21806a 178 SUPERFAMILY SSF50341 23 167 6.54E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 C3Y93_05005 3ba9707c590fd76a587cc5d780a68216 173 Pfam PF08238 Sel1 repeat 20 54 0.0034 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_05005 3ba9707c590fd76a587cc5d780a68216 173 Pfam PF08238 Sel1 repeat 137 166 0.014 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_05005 3ba9707c590fd76a587cc5d780a68216 173 Pfam PF08238 Sel1 repeat 100 135 0.0058 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_05005 3ba9707c590fd76a587cc5d780a68216 173 Pfam PF08238 Sel1 repeat 56 99 0.096 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_05005 3ba9707c590fd76a587cc5d780a68216 173 SMART SM00671 55 99 300.0 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_05005 3ba9707c590fd76a587cc5d780a68216 173 SMART SM00671 136 171 5.1 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_05005 3ba9707c590fd76a587cc5d780a68216 173 SMART SM00671 100 135 0.0042 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_05005 3ba9707c590fd76a587cc5d780a68216 173 SMART SM00671 20 54 0.041 T 14-10-2018 IPR006597 Sel1-like repeat C3Y93_05005 3ba9707c590fd76a587cc5d780a68216 173 Gene3D G3DSA:1.25.40.10 7 173 7.6E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_05005 3ba9707c590fd76a587cc5d780a68216 173 SUPERFAMILY SSF81901 36 167 2.27E-22 T 14-10-2018 C3Y93_11355 4bea6f1bd8125d4efc4a8f72f6bbf925 109 Pfam PF03840 Preprotein translocase SecG subunit 4 72 3.3E-21 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C3Y93_11355 4bea6f1bd8125d4efc4a8f72f6bbf925 109 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 73 6.7E-26 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C3Y93_11355 4bea6f1bd8125d4efc4a8f72f6bbf925 109 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.4E-36 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C3Y93_11355 4bea6f1bd8125d4efc4a8f72f6bbf925 109 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.4E-36 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C3Y93_11355 4bea6f1bd8125d4efc4a8f72f6bbf925 109 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.4E-36 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C3Y93_11355 4bea6f1bd8125d4efc4a8f72f6bbf925 109 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.4E-36 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C3Y93_08065 17173f611068f90a72bd52b5d0fd9cec 152 Pfam PF01814 Hemerythrin HHE cation binding domain 3 119 5.3E-13 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 C3Y93_08065 17173f611068f90a72bd52b5d0fd9cec 152 Gene3D G3DSA:1.20.120.520 1 139 3.9E-9 T 14-10-2018 C3Y93_05490 b5d7b0ba91d28b6e05cfab8bf3987400 185 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 182 6.7E-51 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 C3Y93_05490 b5d7b0ba91d28b6e05cfab8bf3987400 185 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C3Y93_05490 b5d7b0ba91d28b6e05cfab8bf3987400 185 PIRSF PIRSF004553 4 183 1.9E-47 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 C3Y93_05490 b5d7b0ba91d28b6e05cfab8bf3987400 185 Gene3D G3DSA:3.40.50.150 1 183 4.0E-54 T 14-10-2018 C3Y93_05490 b5d7b0ba91d28b6e05cfab8bf3987400 185 SUPERFAMILY SSF53335 5 180 1.7E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_05490 b5d7b0ba91d28b6e05cfab8bf3987400 185 Pfam PF03602 Conserved hypothetical protein 95 5 180 4.6E-53 T 14-10-2018 C3Y93_10240 ce010e977172ff7a938d4a20c30a30d1 380 Pfam PF00534 Glycosyl transferases group 1 198 358 2.5E-26 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3Y93_10240 ce010e977172ff7a938d4a20c30a30d1 380 Gene3D G3DSA:3.40.50.2000 184 364 2.9E-47 T 14-10-2018 C3Y93_10240 ce010e977172ff7a938d4a20c30a30d1 380 Gene3D G3DSA:3.40.50.2000 22 371 2.9E-47 T 14-10-2018 C3Y93_10240 ce010e977172ff7a938d4a20c30a30d1 380 SUPERFAMILY SSF53756 20 374 6.81E-59 T 14-10-2018 C3Y93_10240 ce010e977172ff7a938d4a20c30a30d1 380 Pfam PF13477 Glycosyl transferase 4-like 16 157 2.0E-18 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C3Y93_06960 b3325fd8443b1d2f78dbe5b390b30ff7 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 33 1.2E-14 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria C3Y93_06960 b3325fd8443b1d2f78dbe5b390b30ff7 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 593 1.3E-35 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain C3Y93_06960 b3325fd8443b1d2f78dbe5b390b30ff7 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 159 4.5E-17 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3Y93_06960 b3325fd8443b1d2f78dbe5b390b30ff7 600 Gene3D G3DSA:1.10.540.10 20 161 3.8E-20 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3Y93_06960 b3325fd8443b1d2f78dbe5b390b30ff7 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 451 9.8E-18 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3Y93_06960 b3325fd8443b1d2f78dbe5b390b30ff7 600 Gene3D G3DSA:1.20.140.10 289 467 2.8E-40 T 14-10-2018 C3Y93_06960 b3325fd8443b1d2f78dbe5b390b30ff7 600 SUPERFAMILY SSF56645 41 280 1.02E-61 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3Y93_06960 b3325fd8443b1d2f78dbe5b390b30ff7 600 Gene3D G3DSA:2.40.110.10 162 288 7.6E-29 T 14-10-2018 C3Y93_06960 b3325fd8443b1d2f78dbe5b390b30ff7 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 273 4.8E-18 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3Y93_06960 b3325fd8443b1d2f78dbe5b390b30ff7 600 SUPERFAMILY SSF47203 288 475 1.5E-45 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3Y93_04280 ac206ca9b43a7013dde9ebce5997c551 127 Pfam PF06127 Protein of unknown function (DUF962) 22 114 1.4E-30 T 14-10-2018 IPR009305 Protein of unknown function DUF962 C3Y93_00125 63d81de62772b438d9f7fdfbe5c0ff14 152 PIRSF PIRSF000239 3 152 2.9E-23 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3Y93_00125 63d81de62772b438d9f7fdfbe5c0ff14 152 Pfam PF00578 AhpC/TSA family 13 124 9.4E-26 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3Y93_00125 63d81de62772b438d9f7fdfbe5c0ff14 152 SUPERFAMILY SSF52833 7 151 7.48E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_00125 63d81de62772b438d9f7fdfbe5c0ff14 152 Gene3D G3DSA:3.40.30.10 4 150 4.1E-35 T 14-10-2018 C3Y93_08550 0b7f89ee8453aa6f3fa0b49e7dd8e7e1 149 SUPERFAMILY SSF48013 10 142 1.06E-37 T 14-10-2018 IPR035926 NusB-like superfamily C3Y93_08550 0b7f89ee8453aa6f3fa0b49e7dd8e7e1 149 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 10 141 21.135 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 C3Y93_08550 0b7f89ee8453aa6f3fa0b49e7dd8e7e1 149 Pfam PF01029 NusB family 13 137 1.5E-29 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 C3Y93_08550 0b7f89ee8453aa6f3fa0b49e7dd8e7e1 149 Gene3D G3DSA:1.10.940.10 6 145 1.5E-44 T 14-10-2018 IPR035926 NusB-like superfamily C3Y93_08550 0b7f89ee8453aa6f3fa0b49e7dd8e7e1 149 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 12 139 1.2E-38 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 C3Y93_08500 4048ad4b58b13ffe504223c4b3a4466f 200 Pfam PF00230 Major intrinsic protein 8 192 1.6E-38 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 C3Y93_08500 4048ad4b58b13ffe504223c4b3a4466f 200 ProSitePatterns PS00221 MIP family signature. 31 39 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 C3Y93_08500 4048ad4b58b13ffe504223c4b3a4466f 200 Gene3D G3DSA:1.20.1080.10 2 199 2.0E-65 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 C3Y93_08500 4048ad4b58b13ffe504223c4b3a4466f 200 PRINTS PR00783 Major intrinsic protein family signature 13 37 4.8E-40 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 C3Y93_08500 4048ad4b58b13ffe504223c4b3a4466f 200 PRINTS PR00783 Major intrinsic protein family signature 136 158 4.8E-40 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 C3Y93_08500 4048ad4b58b13ffe504223c4b3a4466f 200 PRINTS PR00783 Major intrinsic protein family signature 175 195 4.8E-40 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 C3Y93_08500 4048ad4b58b13ffe504223c4b3a4466f 200 PRINTS PR00783 Major intrinsic protein family signature 50 69 4.8E-40 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 C3Y93_08500 4048ad4b58b13ffe504223c4b3a4466f 200 PRINTS PR00783 Major intrinsic protein family signature 106 124 4.8E-40 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 C3Y93_08500 4048ad4b58b13ffe504223c4b3a4466f 200 SUPERFAMILY SSF81338 6 196 9.42E-52 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 C3Y93_08375 b69d3aede3ed5d9cb4e30a353d6d1c2f 295 PIRSF PIRSF000126 2 279 1.6E-50 T 14-10-2018 C3Y93_08375 b69d3aede3ed5d9cb4e30a353d6d1c2f 295 Gene3D G3DSA:3.40.50.720 2 265 2.0E-65 T 14-10-2018 C3Y93_08375 b69d3aede3ed5d9cb4e30a353d6d1c2f 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_08375 b69d3aede3ed5d9cb4e30a353d6d1c2f 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_08375 b69d3aede3ed5d9cb4e30a353d6d1c2f 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_08375 b69d3aede3ed5d9cb4e30a353d6d1c2f 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 1.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_08375 b69d3aede3ed5d9cb4e30a353d6d1c2f 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.6E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_08375 b69d3aede3ed5d9cb4e30a353d6d1c2f 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 1.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_08375 b69d3aede3ed5d9cb4e30a353d6d1c2f 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 1.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_08375 b69d3aede3ed5d9cb4e30a353d6d1c2f 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 1.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_08375 b69d3aede3ed5d9cb4e30a353d6d1c2f 295 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3Y93_08375 b69d3aede3ed5d9cb4e30a353d6d1c2f 295 SUPERFAMILY SSF51735 12 233 9.94E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_08375 b69d3aede3ed5d9cb4e30a353d6d1c2f 295 Pfam PF00106 short chain dehydrogenase 16 205 2.7E-54 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_08375 b69d3aede3ed5d9cb4e30a353d6d1c2f 295 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 16 196 5.7E-4 T 14-10-2018 C3Y93_10200 03405a157daff4e951e15404cc832d5f 170 SUPERFAMILY SSF55729 6 162 2.56E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3Y93_10200 03405a157daff4e951e15404cc832d5f 170 Pfam PF13420 Acetyltransferase (GNAT) domain 9 156 6.2E-15 T 14-10-2018 C3Y93_10200 03405a157daff4e951e15404cc832d5f 170 TIGRFAM TIGR03585 PseH: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 8 160 3.2E-36 T 14-10-2018 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase C3Y93_10200 03405a157daff4e951e15404cc832d5f 170 Gene3D G3DSA:3.40.630.30 2 170 1.7E-36 T 14-10-2018 C3Y93_04435 5fc5c0db896efc82d62066e0716d9720 585 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 63 162 6.2E-12 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal C3Y93_04435 5fc5c0db896efc82d62066e0716d9720 585 Gene3D G3DSA:3.40.50.300 311 583 1.0E-104 T 14-10-2018 C3Y93_04435 5fc5c0db896efc82d62066e0716d9720 585 SUPERFAMILY SSF52540 193 582 8.31E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_04435 5fc5c0db896efc82d62066e0716d9720 585 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 402 416 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C3Y93_04435 5fc5c0db896efc82d62066e0716d9720 585 Gene3D G3DSA:3.30.450.90 169 307 5.5E-42 T 14-10-2018 C3Y93_04435 5fc5c0db896efc82d62066e0716d9720 585 SUPERFAMILY SSF160246 14 160 4.18E-8 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily C3Y93_04435 5fc5c0db896efc82d62066e0716d9720 585 Pfam PF00437 Type II/IV secretion system protein 214 474 1.4E-77 T 14-10-2018 IPR001482 Type II/IV secretion system protein C3Y93_12610 d3d85f15889c32bd206385f5f647cad3 172 Gene3D G3DSA:3.30.700.10 9 159 1.1E-9 T 14-10-2018 C3Y93_12610 d3d85f15889c32bd206385f5f647cad3 172 SUPERFAMILY SSF54523 9 148 1.73E-15 T 14-10-2018 C3Y93_12610 d3d85f15889c32bd206385f5f647cad3 172 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 1.0E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_12610 d3d85f15889c32bd206385f5f647cad3 172 ProSitePatterns PS00018 EF-hand calcium-binding domain. 91 103 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site C3Y93_12610 d3d85f15889c32bd206385f5f647cad3 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 3.3E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_12610 d3d85f15889c32bd206385f5f647cad3 172 Pfam PF12019 Type II transport protein GspH 47 160 7.2E-12 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 C3Y93_05075 4334818f855458f43c1f43e08f6c1115 255 SUPERFAMILY SSF103088 145 253 1.7E-32 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3Y93_05075 4334818f855458f43c1f43e08f6c1115 255 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 217 236 8.5E-6 T 14-10-2018 C3Y93_05075 4334818f855458f43c1f43e08f6c1115 255 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 237 255 8.5E-6 T 14-10-2018 C3Y93_05075 4334818f855458f43c1f43e08f6c1115 255 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 216 8.5E-6 T 14-10-2018 C3Y93_05075 4334818f855458f43c1f43e08f6c1115 255 Pfam PF00691 OmpA family 154 248 1.5E-23 T 14-10-2018 IPR006665 OmpA-like domain C3Y93_05075 4334818f855458f43c1f43e08f6c1115 255 Gene3D G3DSA:3.30.1330.60 125 255 1.4E-36 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3Y93_05075 4334818f855458f43c1f43e08f6c1115 255 PRINTS PR01021 OMPA domain signature 184 199 3.2E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_05075 4334818f855458f43c1f43e08f6c1115 255 PRINTS PR01021 OMPA domain signature 154 176 3.2E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_05075 4334818f855458f43c1f43e08f6c1115 255 PRINTS PR01021 OMPA domain signature 199 215 3.2E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_05075 4334818f855458f43c1f43e08f6c1115 255 Gene3D G3DSA:3.40.1520.20 26 124 1.6E-5 T 14-10-2018 C3Y93_02720 95951d09457fbc91345b9a6bbb557a98 332 TIGRFAM TIGR01136 cysKM: cysteine synthase 22 326 1.2E-127 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 C3Y93_02720 95951d09457fbc91345b9a6bbb557a98 332 Gene3D G3DSA:3.40.50.1100 25 321 7.2E-123 T 14-10-2018 C3Y93_02720 95951d09457fbc91345b9a6bbb557a98 332 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 315 2.1E-67 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3Y93_02720 95951d09457fbc91345b9a6bbb557a98 332 Gene3D G3DSA:3.40.50.1100 58 160 7.2E-123 T 14-10-2018 C3Y93_02720 95951d09457fbc91345b9a6bbb557a98 332 TIGRFAM TIGR01139 cysK: cysteine synthase A 22 326 1.3E-132 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 C3Y93_02720 95951d09457fbc91345b9a6bbb557a98 332 SUPERFAMILY SSF53686 18 325 3.4E-98 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3Y93_02720 95951d09457fbc91345b9a6bbb557a98 332 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 46 64 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 C3Y93_02475 1f6d1a7cfc14b5743f16355096c978c0 78 Pfam PF09905 DNA-binding protein VF530 4 67 1.8E-29 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 C3Y93_02475 1f6d1a7cfc14b5743f16355096c978c0 78 Gene3D G3DSA:1.10.720.30 12 72 1.3E-25 T 14-10-2018 IPR036361 SAP domain superfamily C3Y93_03265 35df32ef8fc3eee5f6eed3c981ed2f95 526 PIRSF PIRSF006446 2 525 1.9E-144 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 C3Y93_03265 35df32ef8fc3eee5f6eed3c981ed2f95 526 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 3.3E-175 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 C3Y93_12640 b319f127de1d20dba0fdeedb3b49f0c7 144 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 142 7.9E-39 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 C3Y93_12640 b319f127de1d20dba0fdeedb3b49f0c7 144 Gene3D G3DSA:1.10.1200.120 3 144 4.7E-42 T 14-10-2018 IPR036019 Gated mechanosensitive channel C3Y93_12640 b319f127de1d20dba0fdeedb3b49f0c7 144 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 141 1.8E-43 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L C3Y93_12640 b319f127de1d20dba0fdeedb3b49f0c7 144 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 14-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site C3Y93_12640 b319f127de1d20dba0fdeedb3b49f0c7 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 3.9E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 C3Y93_12640 b319f127de1d20dba0fdeedb3b49f0c7 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 3.9E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 C3Y93_12640 b319f127de1d20dba0fdeedb3b49f0c7 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 3.9E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 C3Y93_12640 b319f127de1d20dba0fdeedb3b49f0c7 144 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 142 23.725 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 C3Y93_12640 b319f127de1d20dba0fdeedb3b49f0c7 144 SUPERFAMILY SSF81330 13 137 4.84E-35 T 14-10-2018 IPR036019 Gated mechanosensitive channel C3Y93_11840 7c543cf45008d041c6be1620e2bee099 210 SUPERFAMILY SSF46689 14 84 2.36E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_11840 7c543cf45008d041c6be1620e2bee099 210 Gene3D G3DSA:1.10.357.10 13 200 1.7E-16 T 14-10-2018 C3Y93_11840 7c543cf45008d041c6be1620e2bee099 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 67 6.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_03180 ac87e729ad63d772740689054cb329ba 117 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 10 112 5.3E-33 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 C3Y93_03180 ac87e729ad63d772740689054cb329ba 117 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 9 113 20.803 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 C3Y93_11900 3b45a22dcc2011af8aa893aea1bb98ce 216 Pfam PF00694 Aconitase C-terminal domain 1 132 3.3E-37 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 C3Y93_11900 3b45a22dcc2011af8aa893aea1bb98ce 216 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.3E-83 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 C3Y93_11900 3b45a22dcc2011af8aa893aea1bb98ce 216 SUPERFAMILY SSF52016 1 204 1.39E-60 T 14-10-2018 C3Y93_11900 3b45a22dcc2011af8aa893aea1bb98ce 216 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.002 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 C3Y93_11900 3b45a22dcc2011af8aa893aea1bb98ce 216 Gene3D G3DSA:3.20.19.10 1 188 7.0E-76 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 C3Y93_05795 ee9532db0228ca626e19e4a04426b71c 207 Pfam PF01810 LysE type translocator 17 203 3.3E-30 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 SUPERFAMILY SSF53067 186 381 2.92E-67 T 14-10-2018 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.2E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.2E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.2E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.2E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.2E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.2E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.2E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.2E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.2E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 Gene3D G3DSA:3.90.640.10 228 315 2.0E-164 T 14-10-2018 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 SUPERFAMILY SSF100920 384 539 1.57E-59 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 5.9E-282 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 SUPERFAMILY SSF100934 534 609 8.24E-9 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 Pfam PF00012 Hsp70 protein 4 603 3.5E-259 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 639 35.996 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 Gene3D G3DSA:3.30.420.40 179 365 2.0E-164 T 14-10-2018 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 Gene3D G3DSA:3.30.420.40 5 378 2.0E-164 T 14-10-2018 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 SUPERFAMILY SSF53067 2 182 1.62E-64 T 14-10-2018 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 Gene3D G3DSA:2.60.34.10 382 522 1.5E-64 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 C3Y93_09895 96f0e72c7445cefd89414dc2be3e4223 644 Gene3D G3DSA:1.20.1270.10 523 601 8.8E-20 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 C3Y93_04060 ad8cbd0efe51635001229f95dd0a1826 548 Pfam PF13005 zinc-finger binding domain of transposase IS66 154 196 5.0E-11 T 14-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 C3Y93_04060 ad8cbd0efe51635001229f95dd0a1826 548 Pfam PF13007 Transposase C of IS166 homeodomain 71 146 2.4E-11 T 14-10-2018 IPR024463 Transposase TnpC, homeodomain C3Y93_04060 ad8cbd0efe51635001229f95dd0a1826 548 Pfam PF13817 IS66 C-terminal element 504 541 1.5E-16 T 14-10-2018 IPR039552 Transposase IS66, C-terminal C3Y93_04060 ad8cbd0efe51635001229f95dd0a1826 548 Pfam PF03050 Transposase IS66 family 210 497 6.3E-102 T 14-10-2018 IPR004291 Transposase, IS66 C3Y93_01250 ad8cbd0efe51635001229f95dd0a1826 548 Pfam PF13005 zinc-finger binding domain of transposase IS66 154 196 5.0E-11 T 14-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 C3Y93_01250 ad8cbd0efe51635001229f95dd0a1826 548 Pfam PF13007 Transposase C of IS166 homeodomain 71 146 2.4E-11 T 14-10-2018 IPR024463 Transposase TnpC, homeodomain C3Y93_01250 ad8cbd0efe51635001229f95dd0a1826 548 Pfam PF13817 IS66 C-terminal element 504 541 1.5E-16 T 14-10-2018 IPR039552 Transposase IS66, C-terminal C3Y93_01250 ad8cbd0efe51635001229f95dd0a1826 548 Pfam PF03050 Transposase IS66 family 210 497 6.3E-102 T 14-10-2018 IPR004291 Transposase, IS66 C3Y93_01950 ad8cbd0efe51635001229f95dd0a1826 548 Pfam PF13005 zinc-finger binding domain of transposase IS66 154 196 5.0E-11 T 14-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 C3Y93_01950 ad8cbd0efe51635001229f95dd0a1826 548 Pfam PF13007 Transposase C of IS166 homeodomain 71 146 2.4E-11 T 14-10-2018 IPR024463 Transposase TnpC, homeodomain C3Y93_01950 ad8cbd0efe51635001229f95dd0a1826 548 Pfam PF13817 IS66 C-terminal element 504 541 1.5E-16 T 14-10-2018 IPR039552 Transposase IS66, C-terminal C3Y93_01950 ad8cbd0efe51635001229f95dd0a1826 548 Pfam PF03050 Transposase IS66 family 210 497 6.3E-102 T 14-10-2018 IPR004291 Transposase, IS66 C3Y93_10715 72818ec9c6cbbf7ec2f436da6dd8ebe3 263 Pfam PF01183 Glycosyl hydrolases family 25 54 227 2.7E-42 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 C3Y93_10715 72818ec9c6cbbf7ec2f436da6dd8ebe3 263 SMART SM00641 50 155 5.7E-13 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup C3Y93_10715 72818ec9c6cbbf7ec2f436da6dd8ebe3 263 SUPERFAMILY SSF51445 47 248 1.19E-56 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C3Y93_10715 72818ec9c6cbbf7ec2f436da6dd8ebe3 263 Gene3D G3DSA:3.20.20.80 39 250 2.8E-68 T 14-10-2018 C3Y93_00565 42b9527924dd43afac66ffa8a5d7ef81 337 Gene3D G3DSA:3.20.20.140 1 335 2.6E-108 T 14-10-2018 C3Y93_00565 42b9527924dd43afac66ffa8a5d7ef81 337 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 10 329 2.7E-126 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 C3Y93_00565 42b9527924dd43afac66ffa8a5d7ef81 337 Pfam PF00962 Adenosine/AMP deaminase 10 327 5.1E-80 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 C3Y93_00565 42b9527924dd43afac66ffa8a5d7ef81 337 SUPERFAMILY SSF51556 4 332 3.67E-92 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3Y93_00565 42b9527924dd43afac66ffa8a5d7ef81 337 Hamap MF_01962 Adenine deaminase. 6 318 90.019 T 14-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 C3Y93_05835 94575d4d9aea4ebd5b1bca4251ec2cca 193 SUPERFAMILY SSF52096 43 157 1.79E-6 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_05835 94575d4d9aea4ebd5b1bca4251ec2cca 193 Gene3D G3DSA:3.90.226.10 29 184 4.3E-5 T 14-10-2018 C3Y93_12535 d619240c6a1d0d12d8c4cb2698c874d1 519 Pfam PF13091 PLD-like domain 308 458 2.8E-21 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C3Y93_12535 d619240c6a1d0d12d8c4cb2698c874d1 519 Pfam PF13091 PLD-like domain 70 218 1.0E-16 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C3Y93_12535 d619240c6a1d0d12d8c4cb2698c874d1 519 SMART SM00155 159 186 0.0015 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 C3Y93_12535 d619240c6a1d0d12d8c4cb2698c874d1 519 SMART SM00155 409 436 4.1E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 C3Y93_12535 d619240c6a1d0d12d8c4cb2698c874d1 519 SUPERFAMILY SSF56024 304 473 1.33E-28 T 14-10-2018 C3Y93_12535 d619240c6a1d0d12d8c4cb2698c874d1 519 Gene3D G3DSA:3.30.870.10 58 254 1.9E-34 T 14-10-2018 C3Y93_12535 d619240c6a1d0d12d8c4cb2698c874d1 519 Gene3D G3DSA:3.30.870.10 291 496 8.9E-38 T 14-10-2018 C3Y93_12535 d619240c6a1d0d12d8c4cb2698c874d1 519 SUPERFAMILY SSF56024 12 238 5.23E-41 T 14-10-2018 C3Y93_01790 8832be9e5811be2940968b0c75a99a76 384 Pfam PF03969 AFG1-like ATPase 16 369 1.1E-130 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 C3Y93_01790 8832be9e5811be2940968b0c75a99a76 384 Hamap MF_01919 Cell division protein ZapE [zapE]. 15 373 50.941 T 14-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 C3Y93_01790 8832be9e5811be2940968b0c75a99a76 384 Gene3D G3DSA:3.40.50.300 48 213 8.9E-22 T 14-10-2018 C3Y93_01790 8832be9e5811be2940968b0c75a99a76 384 SUPERFAMILY SSF52540 58 207 2.38E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_03695 1acaea9ae031e44f4f91d37d67249f48 211 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 11 211 29.238 T 14-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 C3Y93_03695 1acaea9ae031e44f4f91d37d67249f48 211 SUPERFAMILY SSF47240 44 126 7.06E-16 T 14-10-2018 IPR009078 Ferritin-like superfamily C3Y93_03695 1acaea9ae031e44f4f91d37d67249f48 211 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 50 209 1.2E-41 T 14-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 C3Y93_12310 2affc239696fbf018af1b782b2cc1b54 84 Gene3D G3DSA:3.40.30.10 1 84 7.2E-30 T 14-10-2018 C3Y93_12310 2affc239696fbf018af1b782b2cc1b54 84 PRINTS PR00160 Glutaredoxin signature 61 74 3.6E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup C3Y93_12310 2affc239696fbf018af1b782b2cc1b54 84 PRINTS PR00160 Glutaredoxin signature 47 60 3.6E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup C3Y93_12310 2affc239696fbf018af1b782b2cc1b54 84 PRINTS PR00160 Glutaredoxin signature 4 22 3.6E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup C3Y93_12310 2affc239696fbf018af1b782b2cc1b54 84 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 C3Y93_12310 2affc239696fbf018af1b782b2cc1b54 84 Pfam PF00462 Glutaredoxin 4 64 2.4E-22 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 C3Y93_12310 2affc239696fbf018af1b782b2cc1b54 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 8.1E-33 T 14-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 C3Y93_12310 2affc239696fbf018af1b782b2cc1b54 84 SUPERFAMILY SSF52833 1 83 5.03E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_10955 37a6af6363e7ddc63e16dc6b6f41181b 290 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 238 1.4E-42 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 C3Y93_10955 37a6af6363e7ddc63e16dc6b6f41181b 290 Gene3D G3DSA:3.40.50.620 6 280 4.3E-99 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_10955 37a6af6363e7ddc63e16dc6b6f41181b 290 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 259 7.1E-104 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 C3Y93_10955 37a6af6363e7ddc63e16dc6b6f41181b 290 Gene3D G3DSA:3.40.50.620 81 217 4.3E-99 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_10955 37a6af6363e7ddc63e16dc6b6f41181b 290 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 3.7E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3Y93_10955 37a6af6363e7ddc63e16dc6b6f41181b 290 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 3.7E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3Y93_10955 37a6af6363e7ddc63e16dc6b6f41181b 290 PRINTS PR00987 Glutamyl-tRNA synthetase signature 169 179 3.7E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3Y93_10955 37a6af6363e7ddc63e16dc6b6f41181b 290 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 193 3.7E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C3Y93_10955 37a6af6363e7ddc63e16dc6b6f41181b 290 SUPERFAMILY SSF52374 6 282 2.55E-77 T 14-10-2018 C3Y93_10955 37a6af6363e7ddc63e16dc6b6f41181b 290 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 286 37.89 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 Pfam PF06480 FtsH Extracellular 9 89 2.6E-9 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 Gene3D G3DSA:3.40.50.300 141 327 7.7E-70 T 14-10-2018 C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 325 1.4E-45 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 615 629 5.3E-6 T 14-10-2018 C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 197 216 5.3E-6 T 14-10-2018 C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 609 36.677 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 Gene3D G3DSA:1.20.58.760 402 600 4.6E-73 T 14-10-2018 C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 Gene3D G3DSA:2.40.50.920 25 101 1.7E-12 T 14-10-2018 C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 SUPERFAMILY SSF140990 407 602 2.09E-74 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 SMART SM00382 189 328 1.2E-25 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 103 594 1.9E-233 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 Gene3D G3DSA:1.10.8.60 328 401 1.6E-27 T 14-10-2018 C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 Pfam PF01434 Peptidase family M41 387 593 3.4E-78 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 ProSitePatterns PS00674 AAA-protein family signature. 296 314 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 C3Y93_13385 da3b4e42c2a175b06a7bf532474d09c9 629 SUPERFAMILY SSF52540 147 395 1.65E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_07750 134c4f32acb172ee036152a8ae3a75eb 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.441 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07750 134c4f32acb172ee036152a8ae3a75eb 65 SUPERFAMILY SSF46561 1 63 9.16E-19 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07750 134c4f32acb172ee036152a8ae3a75eb 65 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07750 134c4f32acb172ee036152a8ae3a75eb 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 8.3E-18 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07750 134c4f32acb172ee036152a8ae3a75eb 65 Pfam PF00831 Ribosomal L29 protein 4 60 5.8E-19 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07750 134c4f32acb172ee036152a8ae3a75eb 65 Gene3D G3DSA:1.10.287.310 1 63 7.9E-22 T 14-10-2018 C3Y93_00500 ec2a7aecede44cb5df86b09f94d3c1aa 707 SUPERFAMILY SSF55785 146 227 5.44E-7 T 14-10-2018 IPR035965 PAS domain superfamily C3Y93_00500 ec2a7aecede44cb5df86b09f94d3c1aa 707 SUPERFAMILY SSF141868 463 696 7.59E-28 T 14-10-2018 IPR035919 EAL domain superfamily C3Y93_00500 ec2a7aecede44cb5df86b09f94d3c1aa 707 Gene3D G3DSA:3.30.450.20 142 243 4.6E-7 T 14-10-2018 C3Y93_00500 ec2a7aecede44cb5df86b09f94d3c1aa 707 SMART SM00052 456 702 8.7E-8 T 14-10-2018 IPR001633 EAL domain C3Y93_00500 ec2a7aecede44cb5df86b09f94d3c1aa 707 Pfam PF00563 EAL domain 462 696 1.3E-24 T 14-10-2018 IPR001633 EAL domain C3Y93_00500 ec2a7aecede44cb5df86b09f94d3c1aa 707 Gene3D G3DSA:3.20.20.450 460 704 1.2E-27 T 14-10-2018 IPR035919 EAL domain superfamily C3Y93_10390 c74e3ec52067bc909f70d6baefe60f31 202 SUPERFAMILY SSF110997 129 201 7.98E-14 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C3Y93_10390 c74e3ec52067bc909f70d6baefe60f31 202 Gene3D G3DSA:3.30.70.1070 125 202 6.6E-14 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C3Y93_10390 c74e3ec52067bc909f70d6baefe60f31 202 Pfam PF05036 Sporulation related domain 129 201 3.3E-14 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 C3Y93_01505 358fbbf4e1b08b619a8ab7965420da6b 103 Pfam PF08803 Putative mono-oxygenase ydhR 4 98 1.1E-41 T 14-10-2018 IPR014910 Putative monooxygenase YdhR C3Y93_01505 358fbbf4e1b08b619a8ab7965420da6b 103 SUPERFAMILY SSF54909 3 96 1.29E-31 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel C3Y93_01505 358fbbf4e1b08b619a8ab7965420da6b 103 Gene3D G3DSA:3.30.70.100 1 102 1.2E-41 T 14-10-2018 C3Y93_05470 473e53f06127500fb16572dc79907cea 219 SUPERFAMILY SSF52540 1 188 1.43E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_05470 473e53f06127500fb16572dc79907cea 219 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C3Y93_05470 473e53f06127500fb16572dc79907cea 219 Gene3D G3DSA:3.40.50.300 1 219 4.8E-79 T 14-10-2018 C3Y93_05470 473e53f06127500fb16572dc79907cea 219 Hamap MF_00235 Adenylate kinase [adk]. 1 216 51.432 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C3Y93_05470 473e53f06127500fb16572dc79907cea 219 Pfam PF00406 Adenylate kinase 5 185 2.3E-54 T 14-10-2018 C3Y93_05470 473e53f06127500fb16572dc79907cea 219 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.8E-16 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 C3Y93_05470 473e53f06127500fb16572dc79907cea 219 PRINTS PR00094 Adenylate kinase signature 156 171 1.4E-32 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C3Y93_05470 473e53f06127500fb16572dc79907cea 219 PRINTS PR00094 Adenylate kinase signature 32 46 1.4E-32 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C3Y93_05470 473e53f06127500fb16572dc79907cea 219 PRINTS PR00094 Adenylate kinase signature 4 17 1.4E-32 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C3Y93_05470 473e53f06127500fb16572dc79907cea 219 PRINTS PR00094 Adenylate kinase signature 173 187 1.4E-32 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C3Y93_05470 473e53f06127500fb16572dc79907cea 219 PRINTS PR00094 Adenylate kinase signature 81 97 1.4E-32 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C3Y93_05470 473e53f06127500fb16572dc79907cea 219 TIGRFAM TIGR01351 adk: adenylate kinase 2 207 9.4E-73 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 C3Y93_05185 cf36e62553cfcf82ad4cff427b7daebe 533 Gene3D G3DSA:3.40.50.300 16 277 5.5E-80 T 14-10-2018 C3Y93_05185 cf36e62553cfcf82ad4cff427b7daebe 533 Gene3D G3DSA:3.40.50.300 278 533 1.3E-79 T 14-10-2018 C3Y93_05185 cf36e62553cfcf82ad4cff427b7daebe 533 SUPERFAMILY SSF52540 22 262 7.41E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_05185 cf36e62553cfcf82ad4cff427b7daebe 533 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_05185 cf36e62553cfcf82ad4cff427b7daebe 533 Pfam PF00005 ABC transporter 34 190 5.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_05185 cf36e62553cfcf82ad4cff427b7daebe 533 SUPERFAMILY SSF52540 300 527 2.48E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_05185 cf36e62553cfcf82ad4cff427b7daebe 533 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_05185 cf36e62553cfcf82ad4cff427b7daebe 533 SMART SM00382 43 240 3.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_05185 cf36e62553cfcf82ad4cff427b7daebe 533 SMART SM00382 315 504 1.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_05185 cf36e62553cfcf82ad4cff427b7daebe 533 Pfam PF00005 ABC transporter 307 456 1.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_03425 366e0f597b608e8148f6527f17f17ac7 183 Pfam PF03551 Transcriptional regulator PadR-like family 7 79 5.3E-10 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal C3Y93_03425 366e0f597b608e8148f6527f17f17ac7 183 Gene3D G3DSA:1.10.10.10 1 87 4.1E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_03425 366e0f597b608e8148f6527f17f17ac7 183 SUPERFAMILY SSF46785 3 176 3.11E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_03425 366e0f597b608e8148f6527f17f17ac7 183 Pfam PF10400 Virulence activator alpha C-term 91 175 7.1E-17 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal C3Y93_05265 563cdee815b638bcb37dafabad446a7c 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 8 85 1.5E-10 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family C3Y93_05265 563cdee815b638bcb37dafabad446a7c 97 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 8 85 4.2E-9 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family C3Y93_05265 563cdee815b638bcb37dafabad446a7c 97 SUPERFAMILY SSF143011 1 84 2.62E-16 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C3Y93_05265 563cdee815b638bcb37dafabad446a7c 97 Gene3D G3DSA:3.30.2310.20 1 96 1.7E-23 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C3Y93_07700 83736aeb229ba5f66994e43836ba8109 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.557 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07700 83736aeb229ba5f66994e43836ba8109 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 2.9E-20 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07700 83736aeb229ba5f66994e43836ba8109 58 Gene3D G3DSA:3.30.1390.20 1 58 3.5E-23 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily C3Y93_07700 83736aeb229ba5f66994e43836ba8109 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 1.4E-16 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain C3Y93_07700 83736aeb229ba5f66994e43836ba8109 58 SUPERFAMILY SSF55129 1 58 2.22E-20 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily C3Y93_07700 83736aeb229ba5f66994e43836ba8109 58 PIRSF PIRSF002211 1 58 7.9E-25 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07700 83736aeb229ba5f66994e43836ba8109 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site C3Y93_00065 01da1f5b99fa9c8e3074292139d81713 409 Gene3D G3DSA:3.30.1150.10 304 407 9.4E-16 T 14-10-2018 C3Y93_00065 01da1f5b99fa9c8e3074292139d81713 409 Pfam PF13103 TonB C terminal 332 392 1.1E-6 T 14-10-2018 C3Y93_00065 01da1f5b99fa9c8e3074292139d81713 409 TIGRFAM TIGR02794 tolA_full: protein TolA 14 232 1.3E-23 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 C3Y93_00065 01da1f5b99fa9c8e3074292139d81713 409 TIGRFAM TIGR02794 tolA_full: protein TolA 220 407 5.2E-32 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 C3Y93_00065 01da1f5b99fa9c8e3074292139d81713 409 SUPERFAMILY SSF74653 330 408 1.31E-11 T 14-10-2018 C3Y93_09195 6d69069ebe071b65a34263fd7a350569 227 Gene3D G3DSA:2.70.70.10 69 226 1.1E-44 T 14-10-2018 IPR011055 Duplicated hybrid motif C3Y93_09195 6d69069ebe071b65a34263fd7a350569 227 Pfam PF01551 Peptidase family M23 125 219 2.2E-31 T 14-10-2018 IPR016047 Peptidase M23 C3Y93_09195 6d69069ebe071b65a34263fd7a350569 227 SUPERFAMILY SSF51261 62 223 6.8E-53 T 14-10-2018 IPR011055 Duplicated hybrid motif C3Y93_03830 c5d88a246f0fc12159b44a554b2273e6 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03830 c5d88a246f0fc12159b44a554b2273e6 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.132 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03830 c5d88a246f0fc12159b44a554b2273e6 75 SUPERFAMILY SSF46911 3 74 3.01E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03830 c5d88a246f0fc12159b44a554b2273e6 75 Gene3D G3DSA:4.10.640.10 1 75 2.4E-27 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03830 c5d88a246f0fc12159b44a554b2273e6 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 20 71 4.0E-23 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03830 c5d88a246f0fc12159b44a554b2273e6 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.2E-36 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03830 c5d88a246f0fc12159b44a554b2273e6 75 Pfam PF01084 Ribosomal protein S18 18 68 1.2E-24 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03830 c5d88a246f0fc12159b44a554b2273e6 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 7.2E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03830 c5d88a246f0fc12159b44a554b2273e6 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 7.2E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03830 c5d88a246f0fc12159b44a554b2273e6 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 7.2E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03830 c5d88a246f0fc12159b44a554b2273e6 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 7.2E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_12585 71f25e8261040d6b25374f425dd80e7a 386 Gene3D G3DSA:3.40.50.10540 5 331 1.1E-103 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily C3Y93_12585 71f25e8261040d6b25374f425dd80e7a 386 SUPERFAMILY SSF89796 3 370 5.49E-106 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily C3Y93_12585 71f25e8261040d6b25374f425dd80e7a 386 Gene3D G3DSA:3.30.1540.10 226 314 1.1E-103 T 14-10-2018 C3Y93_12585 71f25e8261040d6b25374f425dd80e7a 386 Pfam PF02515 CoA-transferase family III 5 359 1.8E-89 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 C3Y93_11230 3647d60c49287e89f2dcd55b4a595510 717 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 C3Y93_11230 3647d60c49287e89f2dcd55b4a595510 717 Gene3D G3DSA:1.10.1040.50 499 711 1.8E-77 T 14-10-2018 C3Y93_11230 3647d60c49287e89f2dcd55b4a595510 717 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 206 6.9E-39 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3Y93_11230 3647d60c49287e89f2dcd55b4a595510 717 SUPERFAMILY SSF48179 497 640 1.62E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3Y93_11230 3647d60c49287e89f2dcd55b4a595510 717 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 716 0.0 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3Y93_11230 3647d60c49287e89f2dcd55b4a595510 717 Gene3D G3DSA:3.40.50.720 315 498 1.6E-67 T 14-10-2018 C3Y93_11230 3647d60c49287e89f2dcd55b4a595510 717 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 717 51.698 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3Y93_11230 3647d60c49287e89f2dcd55b4a595510 717 SUPERFAMILY SSF51735 314 497 5.64E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_11230 3647d60c49287e89f2dcd55b4a595510 717 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 496 1.8E-61 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3Y93_11230 3647d60c49287e89f2dcd55b4a595510 717 SUPERFAMILY SSF48179 626 716 2.47E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3Y93_11230 3647d60c49287e89f2dcd55b4a595510 717 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 498 593 1.8E-23 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3Y93_11230 3647d60c49287e89f2dcd55b4a595510 717 Gene3D G3DSA:3.90.226.10 1 314 5.2E-98 T 14-10-2018 C3Y93_11230 3647d60c49287e89f2dcd55b4a595510 717 SUPERFAMILY SSF52096 6 307 1.66E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_11230 3647d60c49287e89f2dcd55b4a595510 717 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 495 519 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C3Y93_09720 658a6ea1708e08a6380614dcc90ed932 375 SUPERFAMILY SSF53067 4 347 1.65E-23 T 14-10-2018 C3Y93_09720 658a6ea1708e08a6380614dcc90ed932 375 Gene3D G3DSA:3.30.420.40 11 370 3.6E-123 T 14-10-2018 C3Y93_09720 658a6ea1708e08a6380614dcc90ed932 375 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 4 372 8.5E-133 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 C3Y93_09720 658a6ea1708e08a6380614dcc90ed932 375 Gene3D G3DSA:3.30.420.40 140 335 3.6E-123 T 14-10-2018 C3Y93_09720 658a6ea1708e08a6380614dcc90ed932 375 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 3 375 39.644 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 C3Y93_11280 ac9c2d04ad66f08fc174773efb1e83ce 147 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 11 139 1.5E-29 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 C3Y93_11280 ac9c2d04ad66f08fc174773efb1e83ce 147 Gene3D G3DSA:3.30.420.140 6 141 2.4E-34 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 C3Y93_11280 ac9c2d04ad66f08fc174773efb1e83ce 147 SMART SM00732 8 108 2.1E-25 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 C3Y93_11280 ac9c2d04ad66f08fc174773efb1e83ce 147 SUPERFAMILY SSF53098 8 140 1.38E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_11280 ac9c2d04ad66f08fc174773efb1e83ce 147 Pfam PF03652 Holliday junction resolvase 9 139 6.9E-34 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 C3Y93_11280 ac9c2d04ad66f08fc174773efb1e83ce 147 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 8 143 20.753 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 C3Y93_10550 ef894f4591480581b04321390517c244 279 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 217 1.6E-24 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 C3Y93_10550 ef894f4591480581b04321390517c244 279 Gene3D G3DSA:3.40.50.1980 21 173 2.1E-23 T 14-10-2018 C3Y93_10550 ef894f4591480581b04321390517c244 279 Gene3D G3DSA:3.40.50.1980 174 276 4.3E-9 T 14-10-2018 C3Y93_10550 ef894f4591480581b04321390517c244 279 SUPERFAMILY SSF53807 21 273 1.13E-38 T 14-10-2018 C3Y93_10265 e7a95b5c28955513d98cc06f932a9153 293 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 267 1.9E-103 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 C3Y93_10265 e7a95b5c28955513d98cc06f932a9153 293 Pfam PF00483 Nucleotidyl transferase 5 264 7.1E-23 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 C3Y93_10265 e7a95b5c28955513d98cc06f932a9153 293 SUPERFAMILY SSF53448 3 279 8.34E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_10265 e7a95b5c28955513d98cc06f932a9153 293 Gene3D G3DSA:3.90.550.10 1 291 8.5E-79 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_10975 b1de9427968d0d3b83d963e4c1df0dfc 631 Gene3D G3DSA:3.20.20.540 211 523 3.1E-157 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C3Y93_10975 b1de9427968d0d3b83d963e4c1df0dfc 631 Pfam PF13667 ThiC-associated domain 27 103 1.8E-33 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C3Y93_10975 b1de9427968d0d3b83d963e4c1df0dfc 631 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 142 590 5.8E-221 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C3Y93_10975 b1de9427968d0d3b83d963e4c1df0dfc 631 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 142 592 101.171 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C3Y93_10975 b1de9427968d0d3b83d963e4c1df0dfc 631 Pfam PF01964 Radical SAM ThiC family 143 587 9.8E-207 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C3Y93_05440 0711acc03cb8157d413a20c83a139623 258 PIRSF PIRSF006157 1 258 4.2E-81 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 C3Y93_05440 0711acc03cb8157d413a20c83a139623 258 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 257 2.6E-42 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 C3Y93_05440 0711acc03cb8157d413a20c83a139623 258 SUPERFAMILY SSF53213 6 258 4.58E-83 T 14-10-2018 C3Y93_05440 0711acc03cb8157d413a20c83a139623 258 Gene3D G3DSA:3.40.830.10 1 258 4.8E-85 T 14-10-2018 C3Y93_04380 144a2ce9102ec6e822fe99b3ade0fb2e 380 Gene3D G3DSA:1.20.140.10 235 380 1.8E-40 T 14-10-2018 C3Y93_04380 144a2ce9102ec6e822fe99b3ade0fb2e 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 1.7E-38 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3Y93_04380 144a2ce9102ec6e822fe99b3ade0fb2e 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 C3Y93_04380 144a2ce9102ec6e822fe99b3ade0fb2e 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 C3Y93_04380 144a2ce9102ec6e822fe99b3ade0fb2e 380 SUPERFAMILY SSF47203 229 379 3.38E-43 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3Y93_04380 144a2ce9102ec6e822fe99b3ade0fb2e 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 2.0E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3Y93_04380 144a2ce9102ec6e822fe99b3ade0fb2e 380 PIRSF PIRSF016578 9 380 2.7E-17 T 14-10-2018 C3Y93_04380 144a2ce9102ec6e822fe99b3ade0fb2e 380 SUPERFAMILY SSF56645 4 241 4.58E-84 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3Y93_04380 144a2ce9102ec6e822fe99b3ade0fb2e 380 Gene3D G3DSA:2.40.110.10 121 234 1.2E-40 T 14-10-2018 C3Y93_04380 144a2ce9102ec6e822fe99b3ade0fb2e 380 Gene3D G3DSA:1.10.540.10 2 120 2.5E-36 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3Y93_04380 144a2ce9102ec6e822fe99b3ade0fb2e 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 1.2E-34 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3Y93_00705 2596b17acb9e4ee2b3a97c0a7e740d44 664 Gene3D G3DSA:3.30.470.130 1 450 6.1E-196 T 14-10-2018 C3Y93_00705 2596b17acb9e4ee2b3a97c0a7e740d44 664 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.5E-46 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3Y93_00705 2596b17acb9e4ee2b3a97c0a7e740d44 664 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3Y93_00705 2596b17acb9e4ee2b3a97c0a7e740d44 664 SUPERFAMILY SSF52440 1 113 2.3E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3Y93_00705 2596b17acb9e4ee2b3a97c0a7e740d44 664 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3Y93_00705 2596b17acb9e4ee2b3a97c0a7e740d44 664 SUPERFAMILY SSF56059 83 347 2.36E-66 T 14-10-2018 C3Y93_00705 2596b17acb9e4ee2b3a97c0a7e740d44 664 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 1.7E-74 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C3Y93_00705 2596b17acb9e4ee2b3a97c0a7e740d44 664 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 6.3E-35 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3Y93_00705 2596b17acb9e4ee2b3a97c0a7e740d44 664 SUPERFAMILY SSF51246 331 445 8.89E-36 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C3Y93_00705 2596b17acb9e4ee2b3a97c0a7e740d44 664 SMART SM00878 336 443 2.4E-48 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C3Y93_00705 2596b17acb9e4ee2b3a97c0a7e740d44 664 Pfam PF00364 Biotin-requiring enzyme 590 655 1.4E-13 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C3Y93_00705 2596b17acb9e4ee2b3a97c0a7e740d44 664 SUPERFAMILY SSF51230 582 657 1.96E-19 T 14-10-2018 IPR011053 Single hybrid motif C3Y93_00705 2596b17acb9e4ee2b3a97c0a7e740d44 664 Gene3D G3DSA:2.40.50.100 581 660 4.9E-22 T 14-10-2018 C3Y93_03935 1609549d42d416239614f4c70f461d70 341 SMART SM00930 262 337 3.9E-19 T 14-10-2018 IPR018449 NIL domain C3Y93_03935 1609549d42d416239614f4c70f461d70 341 SUPERFAMILY SSF55021 250 335 3.2E-20 T 14-10-2018 C3Y93_03935 1609549d42d416239614f4c70f461d70 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_03935 1609549d42d416239614f4c70f461d70 341 SMART SM00382 30 218 3.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_03935 1609549d42d416239614f4c70f461d70 341 Gene3D G3DSA:3.40.50.300 1 232 2.5E-73 T 14-10-2018 C3Y93_03935 1609549d42d416239614f4c70f461d70 341 Pfam PF00005 ABC transporter 21 169 3.3E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_03935 1609549d42d416239614f4c70f461d70 341 Gene3D G3DSA:3.30.70.260 233 339 1.5E-27 T 14-10-2018 C3Y93_03935 1609549d42d416239614f4c70f461d70 341 Pfam PF09383 NIL domain 266 335 2.3E-19 T 14-10-2018 IPR018449 NIL domain C3Y93_03935 1609549d42d416239614f4c70f461d70 341 SUPERFAMILY SSF52540 1 240 1.61E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00435 810afae33934f5e89f992386bd6efb73 382 Gene3D G3DSA:3.40.710.10 16 271 6.6E-82 T 14-10-2018 C3Y93_00435 810afae33934f5e89f992386bd6efb73 382 SUPERFAMILY SSF69189 273 365 7.65E-25 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3Y93_00435 810afae33934f5e89f992386bd6efb73 382 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 253 4.8E-78 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 C3Y93_00435 810afae33934f5e89f992386bd6efb73 382 SMART SM00936 273 363 1.9E-33 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3Y93_00435 810afae33934f5e89f992386bd6efb73 382 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 273 363 2.0E-24 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3Y93_00435 810afae33934f5e89f992386bd6efb73 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 7.5E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3Y93_00435 810afae33934f5e89f992386bd6efb73 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 57 68 7.5E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3Y93_00435 810afae33934f5e89f992386bd6efb73 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 7.5E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3Y93_00435 810afae33934f5e89f992386bd6efb73 382 Gene3D G3DSA:2.60.410.10 273 363 3.3E-28 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C3Y93_00435 810afae33934f5e89f992386bd6efb73 382 SUPERFAMILY SSF56601 5 273 7.02E-76 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3Y93_08610 44bb3ca4324d28f51c2c1c15377049a3 668 SUPERFAMILY SSF52540 1 620 2.08E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_08610 44bb3ca4324d28f51c2c1c15377049a3 668 Gene3D G3DSA:3.40.50.300 377 629 4.0E-9 T 14-10-2018 C3Y93_08610 44bb3ca4324d28f51c2c1c15377049a3 668 TIGRFAM TIGR03185 DNA_S_dndD: DNA sulfur modification protein DndD 1 650 9.2E-149 T 14-10-2018 IPR017599 DNA sulphur modification protein DndD C3Y93_08610 44bb3ca4324d28f51c2c1c15377049a3 668 Gene3D G3DSA:3.40.50.300 1 367 1.9E-23 T 14-10-2018 C3Y93_08610 44bb3ca4324d28f51c2c1c15377049a3 668 Pfam PF13476 AAA domain 5 278 2.1E-15 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain C3Y93_08865 4e48bcb47b82985737e85e24abb3d7c2 280 ProSitePatterns PS00337 Beta-lactamase class-D active site. 81 91 - T 14-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 C3Y93_08865 4e48bcb47b82985737e85e24abb3d7c2 280 Pfam PF00905 Penicillin binding protein transpeptidase domain 67 265 3.0E-32 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 C3Y93_08865 4e48bcb47b82985737e85e24abb3d7c2 280 SUPERFAMILY SSF56601 55 272 8.28E-33 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3Y93_08865 4e48bcb47b82985737e85e24abb3d7c2 280 Gene3D G3DSA:3.40.710.10 29 277 5.2E-85 T 14-10-2018 C3Y93_07960 2a7bd387e7ed7af7a8c80825e096bc5c 153 Pfam PF04657 Putative inner membrane exporter, YdcZ 12 149 1.1E-41 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ C3Y93_05860 e27656be56fbe76c17f9bc28aa7830e2 211 Pfam PF14681 Uracil phosphoribosyltransferase 7 206 9.0E-63 T 14-10-2018 C3Y93_05860 e27656be56fbe76c17f9bc28aa7830e2 211 SUPERFAMILY SSF53271 3 206 1.57E-65 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3Y93_05860 e27656be56fbe76c17f9bc28aa7830e2 211 Gene3D G3DSA:3.40.50.2020 1 207 4.5E-70 T 14-10-2018 C3Y93_05860 e27656be56fbe76c17f9bc28aa7830e2 211 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 1.1E-85 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 C3Y93_05860 e27656be56fbe76c17f9bc28aa7830e2 211 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 42.731 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 C3Y93_12340 a41baae28e073d5951a82a380c65ad00 267 Pfam PF00290 Tryptophan synthase alpha chain 8 253 1.1E-85 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_12340 a41baae28e073d5951a82a380c65ad00 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 244 1.4E-75 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_12340 a41baae28e073d5951a82a380c65ad00 267 SUPERFAMILY SSF51366 1 247 6.59E-91 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C3Y93_12340 a41baae28e073d5951a82a380c65ad00 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 34.495 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_12340 a41baae28e073d5951a82a380c65ad00 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_12340 a41baae28e073d5951a82a380c65ad00 267 Gene3D G3DSA:3.20.20.70 1 267 1.1E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_05340 ca96b33bebedf730a46308bbb6824f39 233 Pfam PF01988 VIT family 18 225 5.3E-52 T 14-10-2018 IPR008217 Ccc1 family C3Y93_06340 915bafb1824865b2c2a6fb5fafab0bfb 409 SMART SM00825 Beta-ketoacyl synthase 4 409 1.2E-13 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain C3Y93_06340 915bafb1824865b2c2a6fb5fafab0bfb 409 Gene3D G3DSA:3.40.47.10 258 409 1.3E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_06340 915bafb1824865b2c2a6fb5fafab0bfb 409 SUPERFAMILY SSF53901 2 251 1.38E-57 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_06340 915bafb1824865b2c2a6fb5fafab0bfb 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 364 6.9E-31 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal C3Y93_06340 915bafb1824865b2c2a6fb5fafab0bfb 409 Gene3D G3DSA:3.40.47.10 1 252 3.1E-60 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_06340 915bafb1824865b2c2a6fb5fafab0bfb 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 2.2E-40 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal C3Y93_06340 915bafb1824865b2c2a6fb5fafab0bfb 409 SUPERFAMILY SSF53901 213 407 3.33E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_06340 915bafb1824865b2c2a6fb5fafab0bfb 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site C3Y93_08400 e9b27f540a485bf1a03665a6f904b528 486 SMART SM00388 260 319 1.2E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_08400 e9b27f540a485bf1a03665a6f904b528 486 SMART SM00387 355 463 6.3E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_08400 e9b27f540a485bf1a03665a6f904b528 486 Pfam PF00672 HAMP domain 206 251 5.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3Y93_08400 e9b27f540a485bf1a03665a6f904b528 486 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 313 7.3E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_08400 e9b27f540a485bf1a03665a6f904b528 486 SUPERFAMILY SSF55874 316 461 6.42E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_08400 e9b27f540a485bf1a03665a6f904b528 486 Gene3D G3DSA:3.30.565.10 321 469 4.3E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_08400 e9b27f540a485bf1a03665a6f904b528 486 SMART SM00304 206 259 1.0E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3Y93_08400 e9b27f540a485bf1a03665a6f904b528 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 462 4.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_08400 e9b27f540a485bf1a03665a6f904b528 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 5.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_08400 e9b27f540a485bf1a03665a6f904b528 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 5.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_08400 e9b27f540a485bf1a03665a6f904b528 486 Gene3D G3DSA:1.10.287.130 203 314 5.5E-20 T 14-10-2018 C3Y93_08400 e9b27f540a485bf1a03665a6f904b528 486 SUPERFAMILY SSF47384 244 317 1.59E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3Y93_05815 291a93f1ee1568ead550a8166c5b87e3 398 Pfam PF03486 HI0933-like protein 6 396 5.3E-138 T 14-10-2018 C3Y93_05815 291a93f1ee1568ead550a8166c5b87e3 398 Gene3D G3DSA:2.40.30.10 191 343 4.9E-121 T 14-10-2018 C3Y93_05815 291a93f1ee1568ead550a8166c5b87e3 398 SUPERFAMILY SSF160996 193 344 2.35E-33 T 14-10-2018 C3Y93_05815 291a93f1ee1568ead550a8166c5b87e3 398 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 395 2.5E-118 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like C3Y93_05815 291a93f1ee1568ead550a8166c5b87e3 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 7.2E-8 T 14-10-2018 C3Y93_05815 291a93f1ee1568ead550a8166c5b87e3 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.2E-8 T 14-10-2018 C3Y93_05815 291a93f1ee1568ead550a8166c5b87e3 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 366 373 7.2E-8 T 14-10-2018 C3Y93_05815 291a93f1ee1568ead550a8166c5b87e3 398 SUPERFAMILY SSF51905 1 398 1.71E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_05815 291a93f1ee1568ead550a8166c5b87e3 398 Gene3D G3DSA:3.50.50.60 8 392 4.9E-121 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_05815 291a93f1ee1568ead550a8166c5b87e3 398 Gene3D G3DSA:1.10.8.260 264 326 4.9E-121 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily C3Y93_04565 24f6fc7c1257aa5e9f7bc1136e8b6ec8 243 Pfam PF02661 Fic/DOC family 90 187 1.2E-25 T 14-10-2018 IPR003812 Fido domain C3Y93_04565 24f6fc7c1257aa5e9f7bc1136e8b6ec8 243 SUPERFAMILY SSF140931 67 237 7.59E-48 T 14-10-2018 IPR036597 Fido-like domain superfamily C3Y93_04565 24f6fc7c1257aa5e9f7bc1136e8b6ec8 243 Gene3D G3DSA:1.10.3290.10 1 240 7.3E-77 T 14-10-2018 IPR036597 Fido-like domain superfamily C3Y93_07895 35bfc8b415a5d2ed64bc30c9f56befde 259 Pfam PF02405 Permease MlaE 41 253 2.2E-69 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 C3Y93_07895 35bfc8b415a5d2ed64bc30c9f56befde 259 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 3 257 1.8E-84 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria C3Y93_03580 0fda8bacade8ad8ff4af442bd36c1106 428 SUPERFAMILY SSF56601 31 414 5.29E-62 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3Y93_03580 0fda8bacade8ad8ff4af442bd36c1106 428 Gene3D G3DSA:3.40.710.30 15 417 2.7E-94 T 14-10-2018 C3Y93_03580 0fda8bacade8ad8ff4af442bd36c1106 428 Pfam PF00144 Beta-lactamase 38 394 2.4E-50 T 14-10-2018 IPR001466 Beta-lactamase-related C3Y93_09145 8b477c8ebf047985bda81023de7c057d 258 Pfam PF16956 Putative general bacterial porin 1 148 6.0E-18 T 14-10-2018 IPR031593 Putative general bacterial porin C3Y93_09145 8b477c8ebf047985bda81023de7c057d 258 SUPERFAMILY SSF56935 33 258 6.23E-8 T 14-10-2018 C3Y93_09145 8b477c8ebf047985bda81023de7c057d 258 Gene3D G3DSA:2.40.160.10 15 258 4.3E-5 T 14-10-2018 IPR023614 Porin domain superfamily C3Y93_04235 efacbba7161a7e331bfb70e0e91ce418 215 Gene3D G3DSA:3.40.50.1000 11 208 3.5E-31 T 14-10-2018 IPR023214 HAD superfamily C3Y93_04235 efacbba7161a7e331bfb70e0e91ce418 215 Gene3D G3DSA:1.20.1440.100 23 94 3.5E-31 T 14-10-2018 C3Y93_04235 efacbba7161a7e331bfb70e0e91ce418 215 Pfam PF12710 haloacid dehalogenase-like hydrolase 12 190 2.8E-26 T 14-10-2018 C3Y93_04235 efacbba7161a7e331bfb70e0e91ce418 215 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 11 193 1.3E-21 T 14-10-2018 C3Y93_04235 efacbba7161a7e331bfb70e0e91ce418 215 SUPERFAMILY SSF56784 9 208 1.11E-18 T 14-10-2018 IPR036412 HAD-like superfamily C3Y93_06455 65fe8a33b962ccd8a769fae885d9d829 182 Gene3D G3DSA:3.90.79.10 36 181 8.1E-38 T 14-10-2018 C3Y93_06455 65fe8a33b962ccd8a769fae885d9d829 182 Gene3D G3DSA:2.20.70.10 1 35 1.9E-13 T 14-10-2018 C3Y93_06455 65fe8a33b962ccd8a769fae885d9d829 182 Pfam PF00293 NUDIX domain 46 143 3.3E-9 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3Y93_06455 65fe8a33b962ccd8a769fae885d9d829 182 SUPERFAMILY SSF55811 2 163 1.76E-35 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3Y93_06455 65fe8a33b962ccd8a769fae885d9d829 182 Pfam PF14803 Nudix N-terminal 2 34 2.7E-13 T 14-10-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 C3Y93_09115 736ca0e1d3ac7ea760a9c9889da7cd89 328 Gene3D G3DSA:2.30.30.60 159 207 8.8E-15 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily C3Y93_09115 736ca0e1d3ac7ea760a9c9889da7cd89 328 Pfam PF00924 Mechanosensitive ion channel 105 300 1.3E-44 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 C3Y93_09115 736ca0e1d3ac7ea760a9c9889da7cd89 328 SUPERFAMILY SSF82689 212 310 6.15E-23 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 C3Y93_09115 736ca0e1d3ac7ea760a9c9889da7cd89 328 SUPERFAMILY SSF82861 58 142 7.72E-8 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 C3Y93_09115 736ca0e1d3ac7ea760a9c9889da7cd89 328 SUPERFAMILY SSF50182 143 206 4.25E-16 T 14-10-2018 IPR010920 LSM domain superfamily C3Y93_09115 736ca0e1d3ac7ea760a9c9889da7cd89 328 Gene3D G3DSA:3.30.70.100 211 304 3.3E-21 T 14-10-2018 C3Y93_03555 639c39a13b1da179f3f84e415a9c8467 346 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 346 75.863 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_03555 639c39a13b1da179f3f84e415a9c8467 346 Gene3D G3DSA:3.30.43.10 1 72 1.9E-22 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 C3Y93_03555 639c39a13b1da179f3f84e415a9c8467 346 Gene3D G3DSA:3.30.465.10 73 222 1.1E-51 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C3Y93_03555 639c39a13b1da179f3f84e415a9c8467 346 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 329 6.8E-64 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_03555 639c39a13b1da179f3f84e415a9c8467 346 Gene3D G3DSA:3.90.78.10 223 343 1.8E-40 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_03555 639c39a13b1da179f3f84e415a9c8467 346 SUPERFAMILY SSF56194 208 338 2.62E-45 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_03555 639c39a13b1da179f3f84e415a9c8467 346 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 211 332 1.0E-31 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_03555 639c39a13b1da179f3f84e415a9c8467 346 SUPERFAMILY SSF56176 9 195 8.41E-36 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3Y93_03555 639c39a13b1da179f3f84e415a9c8467 346 Pfam PF01565 FAD binding domain 22 145 2.5E-20 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C3Y93_10205 bbd6a795e7cef4edbb591ed9eed4d5b3 349 Pfam PF03102 NeuB family 38 276 4.3E-93 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 C3Y93_10205 bbd6a795e7cef4edbb591ed9eed4d5b3 349 Gene3D G3DSA:3.20.20.70 4 277 2.5E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_10205 bbd6a795e7cef4edbb591ed9eed4d5b3 349 SUPERFAMILY SSF51569 4 303 1.06E-97 T 14-10-2018 C3Y93_10205 bbd6a795e7cef4edbb591ed9eed4d5b3 349 SUPERFAMILY SSF51269 287 348 1.1E-16 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 C3Y93_10205 bbd6a795e7cef4edbb591ed9eed4d5b3 349 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 17 343 3.7E-154 T 14-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 C3Y93_10205 bbd6a795e7cef4edbb591ed9eed4d5b3 349 SMART SM00858 291 349 6.7E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 C3Y93_10205 bbd6a795e7cef4edbb591ed9eed4d5b3 349 Pfam PF08666 SAF domain 292 345 1.9E-8 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 C3Y93_10205 bbd6a795e7cef4edbb591ed9eed4d5b3 349 Gene3D G3DSA:3.90.1210.10 282 348 5.6E-17 T 14-10-2018 C3Y93_06950 2731a3a1918596736576752df1dfbe24 551 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 438 547 1.6E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_06950 2731a3a1918596736576752df1dfbe24 551 Gene3D G3DSA:3.30.565.10 400 550 9.2E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_06950 2731a3a1918596736576752df1dfbe24 551 SUPERFAMILY SSF55874 383 547 9.82E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_06950 2731a3a1918596736576752df1dfbe24 551 SMART SM00387 437 549 6.9E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_06950 2731a3a1918596736576752df1dfbe24 551 SUPERFAMILY SSF47384 313 392 4.51E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C3Y93_06950 2731a3a1918596736576752df1dfbe24 551 Gene3D G3DSA:1.10.287.130 328 393 1.8E-13 T 14-10-2018 C3Y93_06950 2731a3a1918596736576752df1dfbe24 551 Gene3D G3DSA:1.20.1480.50 242 327 1.3E-8 T 14-10-2018 C3Y93_06950 2731a3a1918596736576752df1dfbe24 551 Pfam PF00512 His Kinase A (phospho-acceptor) domain 329 392 4.0E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_06950 2731a3a1918596736576752df1dfbe24 551 SMART SM00388 329 393 1.2E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C3Y93_06950 2731a3a1918596736576752df1dfbe24 551 SUPERFAMILY SSF158472 278 320 1.15E-6 T 14-10-2018 C3Y93_06950 2731a3a1918596736576752df1dfbe24 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 488 1.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_06950 2731a3a1918596736576752df1dfbe24 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 502 1.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_06950 2731a3a1918596736576752df1dfbe24 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 527 1.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_06950 2731a3a1918596736576752df1dfbe24 551 SMART SM00304 276 328 0.0014 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C3Y93_10260 d8db363a9fec8dfe21f2240ba150cc2d 624 Pfam PF02719 Polysaccharide biosynthesis protein 286 574 2.5E-124 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain C3Y93_10260 d8db363a9fec8dfe21f2240ba150cc2d 624 SUPERFAMILY SSF51735 284 553 2.62E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_10260 d8db363a9fec8dfe21f2240ba150cc2d 624 Gene3D G3DSA:3.40.50.720 281 609 2.5E-115 T 14-10-2018 C3Y93_10260 d8db363a9fec8dfe21f2240ba150cc2d 624 Gene3D G3DSA:3.40.50.720 144 267 1.2E-28 T 14-10-2018 C3Y93_10260 d8db363a9fec8dfe21f2240ba150cc2d 624 Pfam PF13727 CoA-binding domain 68 237 1.7E-8 T 14-10-2018 C3Y93_10260 d8db363a9fec8dfe21f2240ba150cc2d 624 SUPERFAMILY SSF51735 145 271 1.22E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_04480 52b03980ed49512689db865cc7a0ffbe 352 Gene3D G3DSA:1.20.1530.20 2 340 1.5E-23 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily C3Y93_04480 52b03980ed49512689db865cc7a0ffbe 352 Pfam PF01758 Sodium Bile acid symporter family 51 245 3.4E-60 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 C3Y93_04480 52b03980ed49512689db865cc7a0ffbe 352 PIRSF PIRSF005508 1 351 3.8E-132 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 C3Y93_04480 52b03980ed49512689db865cc7a0ffbe 352 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 6 334 1.8E-126 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 C3Y93_01955 97a094bf204bc237423e3ae2cce73f3b 129 Pfam PF05717 IS66 Orf2 like protein 24 120 1.8E-30 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C3Y93_01255 97a094bf204bc237423e3ae2cce73f3b 129 Pfam PF05717 IS66 Orf2 like protein 24 120 1.8E-30 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C3Y93_04065 97a094bf204bc237423e3ae2cce73f3b 129 Pfam PF05717 IS66 Orf2 like protein 24 120 1.8E-30 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C3Y93_11540 0e649f5bf62b33826ee1676cc88dd498 740 Hamap MF_00983 Probable primosomal protein N' [priA]. 16 739 24.15 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 C3Y93_11540 0e649f5bf62b33826ee1676cc88dd498 740 Pfam PF04851 Type III restriction enzyme, res subunit 207 369 1.5E-15 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 C3Y93_11540 0e649f5bf62b33826ee1676cc88dd498 740 SUPERFAMILY SSF52540 205 382 4.91E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11540 0e649f5bf62b33826ee1676cc88dd498 740 SMART SM00487 204 401 9.6E-22 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C3Y93_11540 0e649f5bf62b33826ee1676cc88dd498 740 Gene3D G3DSA:1.10.8.630 13 125 2.3E-29 T 14-10-2018 C3Y93_11540 0e649f5bf62b33826ee1676cc88dd498 740 SUPERFAMILY SSF52540 415 623 1.2E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11540 0e649f5bf62b33826ee1676cc88dd498 740 Gene3D G3DSA:3.40.50.300 198 388 3.8E-74 T 14-10-2018 C3Y93_11540 0e649f5bf62b33826ee1676cc88dd498 740 TIGRFAM TIGR00595 priA: primosomal protein N' 230 736 2.0E-183 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 C3Y93_11540 0e649f5bf62b33826ee1676cc88dd498 740 SMART SM00490 502 599 8.3E-5 T 14-10-2018 IPR001650 Helicase, C-terminal C3Y93_11695 ad073a5fbd18265d3db03ef4e51a66d7 264 Pfam PF13566 Domain of unknown function (DUF4130 90 261 4.3E-50 T 14-10-2018 IPR025404 Domain of unknown function DUF4130 C3Y93_11695 ad073a5fbd18265d3db03ef4e51a66d7 264 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 9 262 1.3E-80 T 14-10-2018 IPR023875 DNA metabolism protein, putative C3Y93_14195 2aeaa630f0c535aed84823fb7ef67a16 107 SMART SM00530 13 68 3.9E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_14195 2aeaa630f0c535aed84823fb7ef67a16 107 Pfam PF01381 Helix-turn-helix 14 68 1.3E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_14195 2aeaa630f0c535aed84823fb7ef67a16 107 SUPERFAMILY SSF47413 4 74 2.68E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_14195 2aeaa630f0c535aed84823fb7ef67a16 107 Gene3D G3DSA:1.10.260.40 10 106 1.4E-21 T 14-10-2018 C3Y93_12655 f1c50345fa1ab35255eafdfc9812ff2f 378 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 341 4.4E-72 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 C3Y93_12655 f1c50345fa1ab35255eafdfc9812ff2f 378 Gene3D G3DSA:3.20.20.70 2 358 3.9E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_12655 f1c50345fa1ab35255eafdfc9812ff2f 378 SUPERFAMILY SSF51395 2 364 2.35E-110 T 14-10-2018 C3Y93_06655 0590d8d54e4642b90aa3f541a6842bb6 98 Pfam PF00216 Bacterial DNA-binding protein 4 92 7.2E-30 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_06655 0590d8d54e4642b90aa3f541a6842bb6 98 SMART SM00411 4 93 1.9E-37 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_06655 0590d8d54e4642b90aa3f541a6842bb6 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 95 6.3E-44 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 C3Y93_06655 0590d8d54e4642b90aa3f541a6842bb6 98 Gene3D G3DSA:4.10.520.10 2 97 2.2E-34 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C3Y93_06655 0590d8d54e4642b90aa3f541a6842bb6 98 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 3.1E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_06655 0590d8d54e4642b90aa3f541a6842bb6 98 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 3.1E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_06655 0590d8d54e4642b90aa3f541a6842bb6 98 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 3.1E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_06655 0590d8d54e4642b90aa3f541a6842bb6 98 SUPERFAMILY SSF47729 4 94 1.25E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C3Y93_06655 0590d8d54e4642b90aa3f541a6842bb6 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 29.439 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 C3Y93_06655 0590d8d54e4642b90aa3f541a6842bb6 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 C3Y93_02220 d094d4d4d9cd3edb4764295726cc98fe 402 Gene3D G3DSA:3.40.50.1100 62 391 1.5E-172 T 14-10-2018 C3Y93_02220 d094d4d4d9cd3edb4764295726cc98fe 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_02220 d094d4d4d9cd3edb4764295726cc98fe 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 386 2.6E-48 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3Y93_02220 d094d4d4d9cd3edb4764295726cc98fe 402 SUPERFAMILY SSF53686 11 397 1.7E-135 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3Y93_02220 d094d4d4d9cd3edb4764295726cc98fe 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 399 48.993 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_02220 d094d4d4d9cd3edb4764295726cc98fe 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 398 8.4E-168 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_02220 d094d4d4d9cd3edb4764295726cc98fe 402 Gene3D G3DSA:3.40.50.1100 18 214 1.5E-172 T 14-10-2018 C3Y93_02220 d094d4d4d9cd3edb4764295726cc98fe 402 PIRSF PIRSF001413 3 402 3.0E-160 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C3Y93_06830 f5ca63c58848506a56d9972b7af179bd 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.2E-55 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3Y93_06830 f5ca63c58848506a56d9972b7af179bd 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.222 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3Y93_06830 f5ca63c58848506a56d9972b7af179bd 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C3Y93_06830 f5ca63c58848506a56d9972b7af179bd 143 SUPERFAMILY SSF54919 1 141 2.75E-57 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3Y93_06830 f5ca63c58848506a56d9972b7af179bd 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.6E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3Y93_06830 f5ca63c58848506a56d9972b7af179bd 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.6E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3Y93_06830 f5ca63c58848506a56d9972b7af179bd 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.6E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3Y93_06830 f5ca63c58848506a56d9972b7af179bd 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.6E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3Y93_06830 f5ca63c58848506a56d9972b7af179bd 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.6E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3Y93_06830 f5ca63c58848506a56d9972b7af179bd 143 Gene3D G3DSA:3.30.70.141 1 143 2.3E-60 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3Y93_06830 f5ca63c58848506a56d9972b7af179bd 143 SMART SM00562 3 140 2.7E-87 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C3Y93_09545 7d48ba7949ed0f698e1c7e32af6d36f3 344 SUPERFAMILY SSF55811 218 342 1.68E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3Y93_09545 7d48ba7949ed0f698e1c7e32af6d36f3 344 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 272 2.9E-106 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 C3Y93_09545 7d48ba7949ed0f698e1c7e32af6d36f3 344 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 164 1.2E-18 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C3Y93_09545 7d48ba7949ed0f698e1c7e32af6d36f3 344 SMART SM00478 39 188 3.4E-37 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C3Y93_09545 7d48ba7949ed0f698e1c7e32af6d36f3 344 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 C3Y93_09545 7d48ba7949ed0f698e1c7e32af6d36f3 344 ProSitePatterns PS01155 Endonuclease III family signature. 100 127 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 C3Y93_09545 7d48ba7949ed0f698e1c7e32af6d36f3 344 Gene3D G3DSA:3.90.79.10 223 344 8.6E-20 T 14-10-2018 C3Y93_09545 7d48ba7949ed0f698e1c7e32af6d36f3 344 SUPERFAMILY SSF48150 6 223 1.88E-71 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 C3Y93_09545 7d48ba7949ed0f698e1c7e32af6d36f3 344 Gene3D G3DSA:1.10.1670.10 9 209 5.3E-82 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 C3Y93_09545 7d48ba7949ed0f698e1c7e32af6d36f3 344 Pfam PF14815 NUDIX domain 233 340 2.0E-23 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 C3Y93_09545 7d48ba7949ed0f698e1c7e32af6d36f3 344 Gene3D G3DSA:1.10.340.30 21 130 5.3E-82 T 14-10-2018 C3Y93_12870 46c6b674ae989f0d3640552aaf9543bf 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 9.2E-30 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 C3Y93_12870 46c6b674ae989f0d3640552aaf9543bf 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site C3Y93_12870 46c6b674ae989f0d3640552aaf9543bf 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 6.8E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain C3Y93_12870 46c6b674ae989f0d3640552aaf9543bf 78 SUPERFAMILY SSF47336 2 77 1.31E-22 T 14-10-2018 IPR036736 ACP-like superfamily C3Y93_12870 46c6b674ae989f0d3640552aaf9543bf 78 Gene3D G3DSA:1.10.1200.10 1 77 1.2E-25 T 14-10-2018 IPR036736 ACP-like superfamily C3Y93_12870 46c6b674ae989f0d3640552aaf9543bf 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 20.511 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 C3Y93_12870 46c6b674ae989f0d3640552aaf9543bf 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 77 3.0E-14 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 C3Y93_02365 d157e7ab7fe6e30039974f95b26041d5 687 Pfam PF11412 Disulphide bond corrector protein DsbC 23 131 5.1E-26 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain C3Y93_02365 d157e7ab7fe6e30039974f95b26041d5 687 SUPERFAMILY SSF74863 22 130 4.18E-27 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily C3Y93_02365 d157e7ab7fe6e30039974f95b26041d5 687 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 295 490 7.6E-16 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 C3Y93_02365 d157e7ab7fe6e30039974f95b26041d5 687 Gene3D G3DSA:3.40.30.10 558 685 6.5E-23 T 14-10-2018 C3Y93_02365 d157e7ab7fe6e30039974f95b26041d5 687 Pfam PF00085 Thioredoxin 572 680 7.1E-9 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C3Y93_02365 d157e7ab7fe6e30039974f95b26041d5 687 ProSitePatterns PS00194 Thioredoxin family active site. 591 609 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3Y93_02365 d157e7ab7fe6e30039974f95b26041d5 687 Gene3D G3DSA:2.60.40.1250 16 141 7.3E-34 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily C3Y93_02365 d157e7ab7fe6e30039974f95b26041d5 687 SUPERFAMILY SSF52833 568 681 3.03E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_00165 634c5ad3cb97b7fea44a07afbfca9e51 353 Pfam PF00005 ABC transporter 18 164 3.6E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_00165 634c5ad3cb97b7fea44a07afbfca9e51 353 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_00165 634c5ad3cb97b7fea44a07afbfca9e51 353 Gene3D G3DSA:3.40.50.300 2 314 1.0E-81 T 14-10-2018 C3Y93_00165 634c5ad3cb97b7fea44a07afbfca9e51 353 Pfam PF12857 TOBE-like domain 287 341 5.9E-8 T 14-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 C3Y93_00165 634c5ad3cb97b7fea44a07afbfca9e51 353 SUPERFAMILY SSF52540 3 244 1.56E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00165 634c5ad3cb97b7fea44a07afbfca9e51 353 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 7.7E-123 T 14-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 C3Y93_00165 634c5ad3cb97b7fea44a07afbfca9e51 353 SUPERFAMILY SSF50331 240 348 1.08E-5 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal C3Y93_00165 634c5ad3cb97b7fea44a07afbfca9e51 353 SMART SM00382 27 214 5.4E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_01935 9b0e9f272761ae370e9fed06e1e9d91a 356 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 7 329 33.306 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 C3Y93_01935 9b0e9f272761ae370e9fed06e1e9d91a 356 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 234 262 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 C3Y93_01935 9b0e9f272761ae370e9fed06e1e9d91a 356 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 10 328 8.7E-104 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 C3Y93_01935 9b0e9f272761ae370e9fed06e1e9d91a 356 Gene3D G3DSA:3.40.1390.10 1 102 7.2E-32 T 14-10-2018 C3Y93_01935 9b0e9f272761ae370e9fed06e1e9d91a 356 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 92 2.2E-20 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 C3Y93_01935 9b0e9f272761ae370e9fed06e1e9d91a 356 SUPERFAMILY SSF51161 34 320 6.63E-72 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3Y93_01935 9b0e9f272761ae370e9fed06e1e9d91a 356 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 262 288 9.7E-4 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_01935 9b0e9f272761ae370e9fed06e1e9d91a 356 Gene3D G3DSA:2.160.10.10 103 312 1.3E-67 T 14-10-2018 C3Y93_01935 9b0e9f272761ae370e9fed06e1e9d91a 356 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 225 258 2.8E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_01935 9b0e9f272761ae370e9fed06e1e9d91a 356 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 112 145 6.1E-8 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_01935 9b0e9f272761ae370e9fed06e1e9d91a 356 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 149 182 1.2E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_03585 6a69539b7807608440b0ccb43d499b86 284 SUPERFAMILY SSF54637 178 283 4.88E-17 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_03585 6a69539b7807608440b0ccb43d499b86 284 Pfam PF01575 MaoC like domain 178 226 5.2E-11 T 14-10-2018 IPR002539 MaoC-like dehydratase domain C3Y93_03585 6a69539b7807608440b0ccb43d499b86 284 Gene3D G3DSA:3.10.129.10 33 284 8.4E-63 T 14-10-2018 C3Y93_03585 6a69539b7807608440b0ccb43d499b86 284 SUPERFAMILY SSF54637 34 155 3.98E-7 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_01700 2228e817aa5daa126a85f57a405305a7 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_01700 2228e817aa5daa126a85f57a405305a7 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_01700 2228e817aa5daa126a85f57a405305a7 204 SUPERFAMILY SSF46689 3 75 2.79E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_01700 2228e817aa5daa126a85f57a405305a7 204 Gene3D G3DSA:1.10.357.10 1 192 1.1E-17 T 14-10-2018 C3Y93_01700 2228e817aa5daa126a85f57a405305a7 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_09810 ba0f0f20130d7930651e5dd7001a2ff0 313 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 23 300 8.4E-64 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C3Y93_09810 ba0f0f20130d7930651e5dd7001a2ff0 313 Gene3D G3DSA:1.20.1510.10 21 229 1.1E-30 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3Y93_09810 ba0f0f20130d7930651e5dd7001a2ff0 313 SUPERFAMILY SSF161111 20 230 1.83E-45 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3Y93_09810 ba0f0f20130d7930651e5dd7001a2ff0 313 Pfam PF01545 Cation efflux family 26 229 3.2E-33 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C3Y93_08440 0cbc2d90d1474bb2b492e70659301724 205 Gene3D G3DSA:3.40.50.880 1 205 1.3E-76 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_08440 0cbc2d90d1474bb2b492e70659301724 205 Pfam PF00117 Glutamine amidotransferase class-I 6 200 2.0E-22 T 14-10-2018 IPR017926 Glutamine amidotransferase C3Y93_08440 0cbc2d90d1474bb2b492e70659301724 205 PIRSF PIRSF000495 2 205 1.9E-71 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 C3Y93_08440 0cbc2d90d1474bb2b492e70659301724 205 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 203 35.127 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 C3Y93_08440 0cbc2d90d1474bb2b492e70659301724 205 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 203 7.0E-70 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 C3Y93_08440 0cbc2d90d1474bb2b492e70659301724 205 SUPERFAMILY SSF52317 2 203 7.51E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_03410 6e2eb3cccc57ce7c9be5b8c83e8dd163 368 PIRSF PIRSF005211 1 366 1.3E-58 T 14-10-2018 IPR012020 AB hydrolase 4 family C3Y93_03410 6e2eb3cccc57ce7c9be5b8c83e8dd163 368 SUPERFAMILY SSF53474 83 342 6.58E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_03410 6e2eb3cccc57ce7c9be5b8c83e8dd163 368 Gene3D G3DSA:3.40.50.1820 66 343 2.7E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_03410 6e2eb3cccc57ce7c9be5b8c83e8dd163 368 Pfam PF00561 alpha/beta hydrolase fold 105 216 6.6E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_08620 ec1ff6fd99cce802f338ec727cfdc9f0 180 SUPERFAMILY SSF103473 29 156 3.66E-7 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_14100 f2abcb6adc981f6a92b2f75f79a1aee4 341 Gene3D G3DSA:3.30.420.10 172 333 1.6E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_14100 f2abcb6adc981f6a92b2f75f79a1aee4 341 Pfam PF00665 Integrase core domain 180 285 2.7E-15 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C3Y93_14100 f2abcb6adc981f6a92b2f75f79a1aee4 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain C3Y93_14100 f2abcb6adc981f6a92b2f75f79a1aee4 341 SUPERFAMILY SSF53098 180 326 1.52E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_01165 f2abcb6adc981f6a92b2f75f79a1aee4 341 Gene3D G3DSA:3.30.420.10 172 333 1.6E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_01165 f2abcb6adc981f6a92b2f75f79a1aee4 341 Pfam PF00665 Integrase core domain 180 285 2.7E-15 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C3Y93_01165 f2abcb6adc981f6a92b2f75f79a1aee4 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain C3Y93_01165 f2abcb6adc981f6a92b2f75f79a1aee4 341 SUPERFAMILY SSF53098 180 326 1.52E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_10320 418d9dea467af88ec301547e456f015b 103 Gene3D G3DSA:1.10.260.40 1 68 5.8E-11 T 14-10-2018 C3Y93_10320 418d9dea467af88ec301547e456f015b 103 SUPERFAMILY SSF47413 4 62 3.1E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_10320 418d9dea467af88ec301547e456f015b 103 Pfam PF01381 Helix-turn-helix 12 59 3.1E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_10320 418d9dea467af88ec301547e456f015b 103 SMART SM00530 11 65 1.8E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_03100 a88f1112d38836ab40d36ba8d8758df9 88 Pfam PF12728 Helix-turn-helix domain 35 78 5.2E-7 T 14-10-2018 C3Y93_03100 a88f1112d38836ab40d36ba8d8758df9 88 SUPERFAMILY SSF46955 33 82 2.38E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3Y93_11340 d248bd2f2860a53d6a49e3280a583ae0 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 197 3.3E-31 T 14-10-2018 IPR018076 Type II secretion system F domain C3Y93_11340 d248bd2f2860a53d6a49e3280a583ae0 408 Pfam PF00482 Type II secretion system (T2SS), protein F 279 400 5.7E-29 T 14-10-2018 IPR018076 Type II secretion system F domain C3Y93_11340 d248bd2f2860a53d6a49e3280a583ae0 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 70 82 1.3E-17 T 14-10-2018 IPR003004 GspF/PilC family C3Y93_11340 d248bd2f2860a53d6a49e3280a583ae0 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 408 1.3E-17 T 14-10-2018 IPR003004 GspF/PilC family C3Y93_11340 d248bd2f2860a53d6a49e3280a583ae0 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 373 387 1.3E-17 T 14-10-2018 IPR003004 GspF/PilC family C3Y93_11340 d248bd2f2860a53d6a49e3280a583ae0 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 169 197 1.3E-17 T 14-10-2018 IPR003004 GspF/PilC family C3Y93_11340 d248bd2f2860a53d6a49e3280a583ae0 408 Gene3D G3DSA:1.20.81.30 61 176 2.6E-31 T 14-10-2018 C3Y93_11340 d248bd2f2860a53d6a49e3280a583ae0 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 169 197 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 C3Y93_11340 d248bd2f2860a53d6a49e3280a583ae0 408 Gene3D G3DSA:1.20.81.30 261 371 1.4E-26 T 14-10-2018 C3Y93_12065 874b95199fb011828223bbc389850f88 134 Gene3D G3DSA:3.30.420.270 62 130 2.9E-14 T 14-10-2018 C3Y93_12065 874b95199fb011828223bbc389850f88 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 2.5E-30 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 C3Y93_04920 99da89257fdcc28d82ea5f13ccd725f6 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 3.1E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C3Y93_04920 99da89257fdcc28d82ea5f13ccd725f6 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 59 81 3.1E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C3Y93_04920 99da89257fdcc28d82ea5f13ccd725f6 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 3.1E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C3Y93_04920 99da89257fdcc28d82ea5f13ccd725f6 257 PIRSF PIRSF006648 2 254 1.7E-21 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C3Y93_04920 99da89257fdcc28d82ea5f13ccd725f6 257 Pfam PF01061 ABC-2 type transporter 10 219 2.0E-36 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 C3Y93_08230 e738dadaee8a2c31b98e381009d9a33c 368 Gene3D G3DSA:3.10.310.50 96 236 1.3E-46 T 14-10-2018 C3Y93_08230 e738dadaee8a2c31b98e381009d9a33c 368 Pfam PF04536 TPM domain 107 230 3.8E-38 T 14-10-2018 IPR007621 TPM domain C3Y93_12690 af50a4089287b3e42e2193625ce957f2 190 Pfam PF13548 Domain of unknown function (DUF4126) 7 179 3.8E-49 T 14-10-2018 IPR025196 Domain of unknown function DUF4126 C3Y93_12930 2403377ac8c8e0aa36269efe05fe0916 305 SUPERFAMILY SSF52151 35 288 1.75E-59 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase C3Y93_12930 2403377ac8c8e0aa36269efe05fe0916 305 Pfam PF01734 Patatin-like phospholipase 41 198 1.4E-25 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 C3Y93_12930 2403377ac8c8e0aa36269efe05fe0916 305 Gene3D G3DSA:3.40.1090.10 27 137 2.3E-26 T 14-10-2018 C3Y93_10090 6a7aaa4cea25549f7fced387fe7ec39a 120 Pfam PF04138 GtrA-like protein 7 116 1.2E-13 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 C3Y93_10090 6a7aaa4cea25549f7fced387fe7ec39a 120 PIRSF PIRSF006298 1 118 7.2E-44 T 14-10-2018 IPR016480 Glucose translocase, bactoprenol-linked C3Y93_01655 446447c5a9ae3ddcf59339d28f91f4da 295 SUPERFAMILY SSF110849 39 133 1.15E-28 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily C3Y93_01655 446447c5a9ae3ddcf59339d28f91f4da 295 Pfam PF02195 ParB-like nuclease domain 40 131 1.9E-27 T 14-10-2018 IPR003115 ParB/Sulfiredoxin C3Y93_01655 446447c5a9ae3ddcf59339d28f91f4da 295 SMART SM00470 39 131 5.5E-34 T 14-10-2018 IPR003115 ParB/Sulfiredoxin C3Y93_01655 446447c5a9ae3ddcf59339d28f91f4da 295 Gene3D G3DSA:3.90.1530.30 52 117 3.4E-28 T 14-10-2018 C3Y93_01655 446447c5a9ae3ddcf59339d28f91f4da 295 SUPERFAMILY SSF109709 124 231 3.92E-35 T 14-10-2018 C3Y93_01655 446447c5a9ae3ddcf59339d28f91f4da 295 Gene3D G3DSA:1.10.10.2830 118 231 1.1E-36 T 14-10-2018 C3Y93_01655 446447c5a9ae3ddcf59339d28f91f4da 295 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 214 7.2E-58 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 C3Y93_14130 808a863aaff092b867c1e8356e887b8e 90 Pfam PF01381 Helix-turn-helix 37 75 4.4E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_14130 808a863aaff092b867c1e8356e887b8e 90 SUPERFAMILY SSF47413 37 80 5.9E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_14130 808a863aaff092b867c1e8356e887b8e 90 Gene3D G3DSA:1.10.260.40 35 90 3.1E-21 T 14-10-2018 C3Y93_14130 808a863aaff092b867c1e8356e887b8e 90 SMART SM00530 36 90 2.7E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_01915 9f231efcc2140033041fedba5d8cf9e0 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 1.1E-41 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C3Y93_01915 9f231efcc2140033041fedba5d8cf9e0 398 SUPERFAMILY SSF69055 303 392 1.44E-29 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C3Y93_01915 9f231efcc2140033041fedba5d8cf9e0 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 390 1.8E-144 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C3Y93_01915 9f231efcc2140033041fedba5d8cf9e0 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 133 6.5E-42 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C3Y93_01915 9f231efcc2140033041fedba5d8cf9e0 398 Gene3D G3DSA:3.40.50.720 1 151 3.4E-54 T 14-10-2018 C3Y93_01915 9f231efcc2140033041fedba5d8cf9e0 398 PIRSF PIRSF006205 2 398 1.5E-148 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C3Y93_01915 9f231efcc2140033041fedba5d8cf9e0 398 SUPERFAMILY SSF51735 4 151 6.68E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_01915 9f231efcc2140033041fedba5d8cf9e0 398 Gene3D G3DSA:1.10.1740.10 312 397 6.3E-31 T 14-10-2018 C3Y93_01915 9f231efcc2140033041fedba5d8cf9e0 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 239 3.6E-38 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C3Y93_01915 9f231efcc2140033041fedba5d8cf9e0 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 392 45.071 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C3Y93_01915 9f231efcc2140033041fedba5d8cf9e0 398 SUPERFAMILY SSF55347 127 274 2.94E-60 T 14-10-2018 C3Y93_07265 e52d770a9dc386bec072cf1532426aa3 264 PIRSF PIRSF006241 1 261 1.0E-91 T 14-10-2018 IPR026040 Hydroxypyruvate isomerase-like C3Y93_07265 e52d770a9dc386bec072cf1532426aa3 264 Gene3D G3DSA:3.20.20.150 1 261 1.9E-64 T 14-10-2018 C3Y93_07265 e52d770a9dc386bec072cf1532426aa3 264 Pfam PF01261 Xylose isomerase-like TIM barrel 21 213 7.7E-26 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain C3Y93_07265 e52d770a9dc386bec072cf1532426aa3 264 SUPERFAMILY SSF51658 1 253 4.98E-66 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily C3Y93_13815 40c8931e7b6dae870a2b7c086d2fdf90 194 Pfam PF00117 Glutamine amidotransferase class-I 4 190 4.8E-53 T 14-10-2018 IPR017926 Glutamine amidotransferase C3Y93_13815 40c8931e7b6dae870a2b7c086d2fdf90 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 8.7E-13 T 14-10-2018 C3Y93_13815 40c8931e7b6dae870a2b7c086d2fdf90 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 8.7E-13 T 14-10-2018 C3Y93_13815 40c8931e7b6dae870a2b7c086d2fdf90 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 8.7E-13 T 14-10-2018 C3Y93_13815 40c8931e7b6dae870a2b7c086d2fdf90 194 Gene3D G3DSA:3.40.50.880 1 193 5.9E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_13815 40c8931e7b6dae870a2b7c086d2fdf90 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 1.0E-81 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3Y93_13815 40c8931e7b6dae870a2b7c086d2fdf90 194 SUPERFAMILY SSF52317 1 192 1.01E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_13815 40c8931e7b6dae870a2b7c086d2fdf90 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.8E-34 T 14-10-2018 C3Y93_13815 40c8931e7b6dae870a2b7c086d2fdf90 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.8E-34 T 14-10-2018 C3Y93_13815 40c8931e7b6dae870a2b7c086d2fdf90 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.8E-34 T 14-10-2018 C3Y93_13815 40c8931e7b6dae870a2b7c086d2fdf90 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.8E-34 T 14-10-2018 C3Y93_13815 40c8931e7b6dae870a2b7c086d2fdf90 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.8E-34 T 14-10-2018 C3Y93_13815 40c8931e7b6dae870a2b7c086d2fdf90 194 PRINTS PR00097 Anthranilate synthase component II signature 169 182 1.8E-34 T 14-10-2018 C3Y93_00135 62ee3bcdb0ba679f385b412520f19fdb 223 Gene3D G3DSA:3.40.50.620 3 219 8.1E-74 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_00135 62ee3bcdb0ba679f385b412520f19fdb 223 Pfam PF06508 Queuosine biosynthesis protein QueC 4 211 1.3E-76 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 C3Y93_00135 62ee3bcdb0ba679f385b412520f19fdb 223 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 205 2.4E-62 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 C3Y93_00135 62ee3bcdb0ba679f385b412520f19fdb 223 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 218 54.117 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 C3Y93_00135 62ee3bcdb0ba679f385b412520f19fdb 223 SUPERFAMILY SSF52402 4 222 1.41E-62 T 14-10-2018 C3Y93_00135 62ee3bcdb0ba679f385b412520f19fdb 223 PIRSF PIRSF006293 1 223 3.8E-77 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 C3Y93_10540 7451c553526ba80fbb514a530fe1a761 262 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_10540 7451c553526ba80fbb514a530fe1a761 262 Pfam PF00005 ABC transporter 29 156 1.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_10540 7451c553526ba80fbb514a530fe1a761 262 SUPERFAMILY SSF52540 9 224 6.96E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_10540 7451c553526ba80fbb514a530fe1a761 262 SMART SM00382 38 205 1.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_10540 7451c553526ba80fbb514a530fe1a761 262 Gene3D G3DSA:3.40.50.300 2 249 1.8E-55 T 14-10-2018 C3Y93_02210 45f12705671981ff905f251df933d1bf 283 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 34 178 4.9E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C3Y93_02210 45f12705671981ff905f251df933d1bf 283 Gene3D G3DSA:3.40.50.300 15 195 3.0E-27 T 14-10-2018 C3Y93_02210 45f12705671981ff905f251df933d1bf 283 SMART SM00382 30 188 2.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_02210 45f12705671981ff905f251df933d1bf 283 SUPERFAMILY SSF52540 16 253 1.27E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_07010 2345ece1aacac567bd3946624372b40e 369 Gene3D G3DSA:3.40.50.2000 14 183 1.3E-46 T 14-10-2018 C3Y93_07010 2345ece1aacac567bd3946624372b40e 369 SUPERFAMILY SSF53756 4 341 1.94E-45 T 14-10-2018 C3Y93_07010 2345ece1aacac567bd3946624372b40e 369 Gene3D G3DSA:3.40.50.2000 184 344 1.3E-46 T 14-10-2018 C3Y93_07010 2345ece1aacac567bd3946624372b40e 369 Pfam PF00534 Glycosyl transferases group 1 194 349 1.2E-28 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3Y93_09920 5f68717282e52d9b7773125b08f9abc3 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 3.0E-13 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3Y93_09920 5f68717282e52d9b7773125b08f9abc3 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 138 153 3.0E-13 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3Y93_09920 5f68717282e52d9b7773125b08f9abc3 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 38 53 3.0E-13 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3Y93_09920 5f68717282e52d9b7773125b08f9abc3 189 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 C3Y93_09920 5f68717282e52d9b7773125b08f9abc3 189 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 25 182 5.1E-50 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C3Y93_09920 5f68717282e52d9b7773125b08f9abc3 189 PIRSF PIRSF001467 8 186 4.2E-31 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 C3Y93_09920 5f68717282e52d9b7773125b08f9abc3 189 Gene3D G3DSA:2.40.100.10 20 183 1.0E-63 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily C3Y93_09920 5f68717282e52d9b7773125b08f9abc3 189 SUPERFAMILY SSF50891 21 182 5.7E-60 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily C3Y93_02395 2707e5bca6e44b699b981dbbc9d1a2a3 104 SUPERFAMILY SSF47413 47 89 2.68E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_02395 2707e5bca6e44b699b981dbbc9d1a2a3 104 SMART SM00530 45 99 0.0014 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_02395 2707e5bca6e44b699b981dbbc9d1a2a3 104 Gene3D G3DSA:1.10.260.40 4 101 3.1E-17 T 14-10-2018 C3Y93_02395 2707e5bca6e44b699b981dbbc9d1a2a3 104 Pfam PF01381 Helix-turn-helix 48 83 1.7E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 1.1E-23 T 14-10-2018 C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 1.1E-23 T 14-10-2018 C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.1E-23 T 14-10-2018 C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.1E-23 T 14-10-2018 C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.1E-23 T 14-10-2018 C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 Gene3D G3DSA:3.30.390.120 320 384 7.8E-15 T 14-10-2018 C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 Gene3D G3DSA:3.50.50.60 5 284 9.8E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 Gene3D G3DSA:3.50.50.60 111 248 9.8E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 175 4.5E-18 T 14-10-2018 C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 4.5E-18 T 14-10-2018 C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.5E-18 T 14-10-2018 C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 237 251 4.5E-18 T 14-10-2018 C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 SUPERFAMILY SSF51905 2 192 4.44E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 SUPERFAMILY SSF51905 147 309 4.79E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_13630 c16b9704e2ba0c456b756e83afa58b0a 392 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 283 7.3E-55 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3Y93_04140 b1660016bce3af18b2a74a3b7cc33eb1 199 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 71 100 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site C3Y93_04140 b1660016bce3af18b2a74a3b7cc33eb1 199 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 2.2E-29 T 14-10-2018 IPR001498 Impact, N-terminal C3Y93_04140 b1660016bce3af18b2a74a3b7cc33eb1 199 Gene3D G3DSA:3.30.230.30 1 125 9.5E-47 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily C3Y93_04140 b1660016bce3af18b2a74a3b7cc33eb1 199 SUPERFAMILY SSF54211 4 122 8.34E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C3Y93_04140 b1660016bce3af18b2a74a3b7cc33eb1 199 SUPERFAMILY SSF54980 129 194 2.81E-8 T 14-10-2018 IPR035647 EF-G domain III/V-like C3Y93_11650 004f6eb603ba7ec6cd48d4fccb9d8585 258 SUPERFAMILY SSF53335 22 256 6.19E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_11650 004f6eb603ba7ec6cd48d4fccb9d8585 258 Pfam PF08241 Methyltransferase domain 48 137 4.1E-19 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C3Y93_11650 004f6eb603ba7ec6cd48d4fccb9d8585 258 Gene3D G3DSA:3.40.50.150 14 245 1.2E-36 T 14-10-2018 C3Y93_04610 0d5f2ccdbc8088e0300575fea4d979b7 533 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 186 497 1.9E-30 T 14-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal C3Y93_04610 0d5f2ccdbc8088e0300575fea4d979b7 533 Gene3D G3DSA:2.40.160.50 159 531 7.1E-68 T 14-10-2018 C3Y93_04610 0d5f2ccdbc8088e0300575fea4d979b7 533 Gene3D G3DSA:3.10.20.310 27 122 1.1E-19 T 14-10-2018 C3Y93_04610 0d5f2ccdbc8088e0300575fea4d979b7 533 Pfam PF08479 POTRA domain, ShlB-type 47 122 7.6E-18 T 14-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type C3Y93_03595 edda03e2119918012208f944c57bdd26 503 SUPERFAMILY SSF53901 86 359 1.15E-56 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_03595 edda03e2119918012208f944c57bdd26 503 Gene3D G3DSA:3.40.47.10 76 503 9.1E-103 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_03595 edda03e2119918012208f944c57bdd26 503 Pfam PF02803 Thiolase, C-terminal domain 380 503 1.1E-30 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 C3Y93_03595 edda03e2119918012208f944c57bdd26 503 Pfam PF00108 Thiolase, N-terminal domain 86 353 8.0E-49 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 C3Y93_03595 edda03e2119918012208f944c57bdd26 503 SUPERFAMILY SSF53901 359 503 6.99E-29 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_03595 edda03e2119918012208f944c57bdd26 503 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 88 502 6.2E-117 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3Y93_03025 296f91a359c842dce09c9b2bc012c694 219 SUPERFAMILY SSF47413 2 66 1.21E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_03025 296f91a359c842dce09c9b2bc012c694 219 SMART SM00530 7 61 1.2E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_03025 296f91a359c842dce09c9b2bc012c694 219 SUPERFAMILY SSF51306 84 207 5.49E-23 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily C3Y93_03025 296f91a359c842dce09c9b2bc012c694 219 Pfam PF01381 Helix-turn-helix 8 61 1.1E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_03025 296f91a359c842dce09c9b2bc012c694 219 Pfam PF00717 Peptidase S24-like 123 190 2.0E-12 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C C3Y93_03025 296f91a359c842dce09c9b2bc012c694 219 Gene3D G3DSA:2.10.109.10 79 205 8.0E-32 T 14-10-2018 C3Y93_03025 296f91a359c842dce09c9b2bc012c694 219 Gene3D G3DSA:1.10.260.40 1 69 1.3E-19 T 14-10-2018 C3Y93_12120 a287ba9cdc3527fcb6b34154e3809131 160 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 41 151 3.2E-34 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 C3Y93_12120 a287ba9cdc3527fcb6b34154e3809131 160 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 119 129 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site C3Y93_12120 a287ba9cdc3527fcb6b34154e3809131 160 Gene3D G3DSA:3.40.390.30 2 160 2.7E-46 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 C3Y93_12120 a287ba9cdc3527fcb6b34154e3809131 160 Pfam PF02130 Uncharacterized protein family UPF0054 21 150 6.1E-35 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 C3Y93_12120 a287ba9cdc3527fcb6b34154e3809131 160 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 154 22.524 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 C3Y93_12120 a287ba9cdc3527fcb6b34154e3809131 160 SUPERFAMILY SSF55486 18 157 8.3E-43 T 14-10-2018 C3Y93_06915 9c999bee629c78dfeee4f888446281b0 237 Gene3D G3DSA:3.20.20.190 1 237 5.7E-52 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 C3Y93_06915 9c999bee629c78dfeee4f888446281b0 237 SUPERFAMILY SSF51695 1 236 1.03E-46 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 C3Y93_06915 9c999bee629c78dfeee4f888446281b0 237 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 231 2.2E-30 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 C3Y93_05140 123d7dfaa5f44b2da566df09e4ccc21b 419 SUPERFAMILY SSF55073 252 410 1.73E-46 T 14-10-2018 IPR029787 Nucleotide cyclase C3Y93_05140 123d7dfaa5f44b2da566df09e4ccc21b 419 Pfam PF00990 Diguanylate cyclase, GGDEF domain 248 407 1.4E-48 T 14-10-2018 IPR000160 GGDEF domain C3Y93_05140 123d7dfaa5f44b2da566df09e4ccc21b 419 SMART SM00267 236 411 3.0E-55 T 14-10-2018 IPR000160 GGDEF domain C3Y93_05140 123d7dfaa5f44b2da566df09e4ccc21b 419 Gene3D G3DSA:3.30.70.270 236 411 1.3E-54 T 14-10-2018 C3Y93_05140 123d7dfaa5f44b2da566df09e4ccc21b 419 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 245 410 2.3E-52 T 14-10-2018 IPR000160 GGDEF domain C3Y93_05445 a52e77ca0deb7cfd9651388c6ecb8f55 260 Pfam PF03724 META domain 60 146 1.0E-15 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ C3Y93_05445 a52e77ca0deb7cfd9651388c6ecb8f55 260 Gene3D G3DSA:2.40.128.270 41 153 1.5E-14 T 14-10-2018 IPR038670 HslJ-like superfamily C3Y93_05445 a52e77ca0deb7cfd9651388c6ecb8f55 260 Pfam PF14302 Domain of unknown function (DUF4377) 169 253 5.9E-24 T 14-10-2018 IPR025485 Domain of unknown function DUF4377 C3Y93_10625 10fdb45a5850a811a127509283146f3b 189 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 3 188 34.826 T 14-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 C3Y93_10625 10fdb45a5850a811a127509283146f3b 189 SUPERFAMILY SSF55821 6 188 2.99E-42 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily C3Y93_10625 10fdb45a5850a811a127509283146f3b 189 Pfam PF01300 Telomere recombination 12 186 1.1E-32 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 C3Y93_10625 10fdb45a5850a811a127509283146f3b 189 Gene3D G3DSA:3.90.870.10 1 188 2.0E-50 T 14-10-2018 C3Y93_04515 de12471ec80bbda01264be66c6f5a343 375 Pfam PF05816 Toxic anion resistance protein (TelA) 45 364 3.1E-84 T 14-10-2018 IPR008863 Toxic anion resistance C3Y93_04515 de12471ec80bbda01264be66c6f5a343 375 PIRSF PIRSF026508 2 375 1.2E-115 T 14-10-2018 IPR008863 Toxic anion resistance C3Y93_01120 e4152b76e0de4efa76d99a0a5ef109c0 129 Pfam PF05717 IS66 Orf2 like protein 24 119 1.7E-30 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C3Y93_09460 416e0ae57e417676563e927122cf305b 159 Gene3D G3DSA:3.30.1050.10 27 137 1.4E-5 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily C3Y93_09460 416e0ae57e417676563e927122cf305b 159 Pfam PF02036 SCP-2 sterol transfer family 44 130 1.2E-4 T 14-10-2018 IPR003033 SCP2 sterol-binding domain C3Y93_06390 0776bb1529073098fb00d4f52d432ce7 681 Gene3D G3DSA:2.60.40.420 16 144 1.6E-37 T 14-10-2018 IPR008972 Cupredoxin C3Y93_06390 0776bb1529073098fb00d4f52d432ce7 681 ProSitePatterns PS00080 Multicopper oxidases signature 2. 631 642 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 C3Y93_06390 0776bb1529073098fb00d4f52d432ce7 681 Gene3D G3DSA:2.60.40.420 153 373 2.3E-36 T 14-10-2018 IPR008972 Cupredoxin C3Y93_06390 0776bb1529073098fb00d4f52d432ce7 681 Pfam PF00394 Multicopper oxidase 159 317 2.4E-26 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 C3Y93_06390 0776bb1529073098fb00d4f52d432ce7 681 SUPERFAMILY SSF49503 157 363 3.68E-40 T 14-10-2018 IPR008972 Cupredoxin C3Y93_06390 0776bb1529073098fb00d4f52d432ce7 681 SUPERFAMILY SSF49503 11 174 6.75E-36 T 14-10-2018 IPR008972 Cupredoxin C3Y93_06390 0776bb1529073098fb00d4f52d432ce7 681 Pfam PF07731 Multicopper oxidase 533 649 1.3E-25 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 C3Y93_06390 0776bb1529073098fb00d4f52d432ce7 681 Gene3D G3DSA:2.60.40.420 519 666 3.9E-32 T 14-10-2018 IPR008972 Cupredoxin C3Y93_06390 0776bb1529073098fb00d4f52d432ce7 681 SUPERFAMILY SSF49503 490 648 1.75E-35 T 14-10-2018 IPR008972 Cupredoxin C3Y93_06390 0776bb1529073098fb00d4f52d432ce7 681 ProSitePatterns PS00079 Multicopper oxidases signature 1. 626 646 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site C3Y93_06390 0776bb1529073098fb00d4f52d432ce7 681 Pfam PF07732 Multicopper oxidase 32 146 4.1E-35 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 C3Y93_13875 b5384db14e9f641d27eed630e2f51a44 392 Pfam PF13365 Trypsin-like peptidase domain 115 248 2.1E-31 T 14-10-2018 C3Y93_13875 b5384db14e9f641d27eed630e2f51a44 392 Gene3D G3DSA:2.30.42.10 282 387 1.8E-23 T 14-10-2018 C3Y93_13875 b5384db14e9f641d27eed630e2f51a44 392 Pfam PF13180 PDZ domain 287 375 4.7E-19 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3Y93_13875 b5384db14e9f641d27eed630e2f51a44 392 SMART SM00228 287 366 1.1E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C3Y93_13875 b5384db14e9f641d27eed630e2f51a44 392 PRINTS PR00834 HtrA/DegQ protease family signature 324 336 1.4E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3Y93_13875 b5384db14e9f641d27eed630e2f51a44 392 PRINTS PR00834 HtrA/DegQ protease family signature 241 258 1.4E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3Y93_13875 b5384db14e9f641d27eed630e2f51a44 392 PRINTS PR00834 HtrA/DegQ protease family signature 124 136 1.4E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3Y93_13875 b5384db14e9f641d27eed630e2f51a44 392 PRINTS PR00834 HtrA/DegQ protease family signature 184 208 1.4E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3Y93_13875 b5384db14e9f641d27eed630e2f51a44 392 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 1.4E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3Y93_13875 b5384db14e9f641d27eed630e2f51a44 392 PRINTS PR00834 HtrA/DegQ protease family signature 145 165 1.4E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C3Y93_13875 b5384db14e9f641d27eed630e2f51a44 392 Gene3D G3DSA:2.40.10.120 58 280 3.7E-77 T 14-10-2018 C3Y93_13875 b5384db14e9f641d27eed630e2f51a44 392 SUPERFAMILY SSF50494 58 284 3.01E-62 T 14-10-2018 IPR009003 Peptidase S1, PA clan C3Y93_13875 b5384db14e9f641d27eed630e2f51a44 392 SUPERFAMILY SSF50156 258 367 2.76E-22 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3Y93_10380 cf9b123bac6cccc8797d07428abe79fa 132 Gene3D G3DSA:3.30.300.20 4 131 1.5E-27 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3Y93_10380 cf9b123bac6cccc8797d07428abe79fa 132 Pfam PF02566 OsmC-like protein 37 129 6.8E-15 T 14-10-2018 IPR003718 OsmC/Ohr family C3Y93_10380 cf9b123bac6cccc8797d07428abe79fa 132 SUPERFAMILY SSF82784 7 131 2.36E-25 T 14-10-2018 IPR036102 OsmC/Ohr superfamily C3Y93_01450 de7a90b49a5fee8ba547cf8979e228d2 247 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 247 43.975 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 C3Y93_01450 de7a90b49a5fee8ba547cf8979e228d2 247 Pfam PF02654 Cobalamin-5-phosphate synthase 7 237 6.6E-51 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 C3Y93_01450 de7a90b49a5fee8ba547cf8979e228d2 247 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 4 239 3.3E-42 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 C3Y93_02735 33b2395ff3ff11e2dcec0f3bc254c112 574 TIGRFAM TIGR00815 sulP: sulfate permease 13 553 1.0E-126 T 14-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 C3Y93_02735 33b2395ff3ff11e2dcec0f3bc254c112 574 Pfam PF01740 STAS domain 459 560 2.2E-14 T 14-10-2018 IPR002645 STAS domain C3Y93_02735 33b2395ff3ff11e2dcec0f3bc254c112 574 SUPERFAMILY SSF52091 458 567 3.34E-15 T 14-10-2018 IPR036513 STAS domain superfamily C3Y93_02735 33b2395ff3ff11e2dcec0f3bc254c112 574 Gene3D G3DSA:3.30.750.24 437 570 4.0E-25 T 14-10-2018 IPR036513 STAS domain superfamily C3Y93_02735 33b2395ff3ff11e2dcec0f3bc254c112 574 Pfam PF00916 Sulfate permease family 26 407 3.5E-100 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 C3Y93_05055 9f3dd493d575a71b7a4717c11867ac58 411 Pfam PF01966 HD domain 231 308 1.3E-4 T 14-10-2018 IPR006674 HD domain C3Y93_05055 9f3dd493d575a71b7a4717c11867ac58 411 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 53.002 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 C3Y93_05055 9f3dd493d575a71b7a4717c11867ac58 411 Gene3D G3DSA:3.30.460.10 1 121 3.5E-30 T 14-10-2018 C3Y93_05055 9f3dd493d575a71b7a4717c11867ac58 411 Pfam PF01743 Poly A polymerase head domain 3 122 3.2E-20 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 C3Y93_05055 9f3dd493d575a71b7a4717c11867ac58 411 SUPERFAMILY SSF81301 1 118 9.7E-32 T 14-10-2018 C3Y93_05055 9f3dd493d575a71b7a4717c11867ac58 411 PIRSF PIRSF000813 1 407 2.4E-190 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 C3Y93_05055 9f3dd493d575a71b7a4717c11867ac58 411 Gene3D G3DSA:1.10.3090.10 122 409 3.9E-42 T 14-10-2018 C3Y93_05055 9f3dd493d575a71b7a4717c11867ac58 411 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.4E-13 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 C3Y93_05055 9f3dd493d575a71b7a4717c11867ac58 411 SUPERFAMILY SSF81891 120 400 1.57E-51 T 14-10-2018 C3Y93_05055 9f3dd493d575a71b7a4717c11867ac58 411 Hamap MF_01262 CCA-adding enzyme [cca]. 1 400 40.337 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 C3Y93_11600 b98f925c08e47a36fa1662bb2003a57a 203 Pfam PF06938 Protein of unknown function (DUF1285) 57 196 1.4E-47 T 14-10-2018 IPR010707 Protein of unknown function DUF1285 C3Y93_11600 b98f925c08e47a36fa1662bb2003a57a 203 Gene3D G3DSA:2.30.270.10 107 174 1.0E-12 T 14-10-2018 IPR023361 DUF1285, beta-roll domain superfamily C3Y93_11600 b98f925c08e47a36fa1662bb2003a57a 203 Gene3D G3DSA:3.10.540.10 13 106 1.7E-32 T 14-10-2018 C3Y93_11600 b98f925c08e47a36fa1662bb2003a57a 203 PIRSF PIRSF029557 9 201 1.1E-41 T 14-10-2018 IPR010707 Protein of unknown function DUF1285 C3Y93_07190 f821f1cb14376600a2073f4c09d7d606 188 Pfam PF04011 LemA family 6 174 5.9E-35 T 14-10-2018 IPR007156 LemA C3Y93_07190 f821f1cb14376600a2073f4c09d7d606 188 Gene3D G3DSA:1.20.1440.20 16 183 1.8E-30 T 14-10-2018 IPR023353 LemA-like domain superfamily C3Y93_07190 f821f1cb14376600a2073f4c09d7d606 188 SUPERFAMILY SSF140478 25 166 7.45E-34 T 14-10-2018 IPR023353 LemA-like domain superfamily C3Y93_02350 14e31628e40922599ed2e4275197cb22 151 Pfam PF01220 Dehydroquinase class II 5 141 1.2E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C3Y93_02350 14e31628e40922599ed2e4275197cb22 151 PIRSF PIRSF001399 1 148 8.1E-62 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C3Y93_02350 14e31628e40922599ed2e4275197cb22 151 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C3Y93_02350 14e31628e40922599ed2e4275197cb22 151 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 144 4.6E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C3Y93_02350 14e31628e40922599ed2e4275197cb22 151 SUPERFAMILY SSF52304 4 147 3.79E-61 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C3Y93_02350 14e31628e40922599ed2e4275197cb22 151 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 151 70.602 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C3Y93_02350 14e31628e40922599ed2e4275197cb22 151 Gene3D G3DSA:3.40.50.9100 1 151 5.1E-65 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C3Y93_02350 14e31628e40922599ed2e4275197cb22 151 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 142 4.0E-66 T 14-10-2018 C3Y93_00965 e18bb325c84290d2fdfebc3fbd26bae7 159 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 C3Y93_00965 e18bb325c84290d2fdfebc3fbd26bae7 159 PIRSF PIRSF000303 1 159 8.0E-69 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3Y93_00965 e18bb325c84290d2fdfebc3fbd26bae7 159 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 14-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 C3Y93_00965 e18bb325c84290d2fdfebc3fbd26bae7 159 Gene3D G3DSA:3.40.30.10 1 159 4.0E-71 T 14-10-2018 C3Y93_00965 e18bb325c84290d2fdfebc3fbd26bae7 159 SUPERFAMILY SSF52833 3 158 2.57E-61 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_00965 e18bb325c84290d2fdfebc3fbd26bae7 159 Pfam PF00255 Glutathione peroxidase 4 110 6.9E-41 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3Y93_00965 e18bb325c84290d2fdfebc3fbd26bae7 159 PRINTS PR01011 Glutathione peroxidase family signature 22 39 3.3E-21 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3Y93_00965 e18bb325c84290d2fdfebc3fbd26bae7 159 PRINTS PR01011 Glutathione peroxidase family signature 122 131 3.3E-21 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3Y93_00965 e18bb325c84290d2fdfebc3fbd26bae7 159 PRINTS PR01011 Glutathione peroxidase family signature 57 73 3.3E-21 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C3Y93_00950 c2d0a48933bbcebf2593b45526d731c2 243 SMART SM00849 15 173 2.4E-35 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_00950 c2d0a48933bbcebf2593b45526d731c2 243 PIRSF PIRSF005457 1 243 2.9E-91 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 C3Y93_00950 c2d0a48933bbcebf2593b45526d731c2 243 Pfam PF00753 Metallo-beta-lactamase superfamily 13 173 1.2E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_00950 c2d0a48933bbcebf2593b45526d731c2 243 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 5 243 40.752 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 C3Y93_00950 c2d0a48933bbcebf2593b45526d731c2 243 Gene3D G3DSA:3.60.15.10 2 243 2.6E-78 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_00950 c2d0a48933bbcebf2593b45526d731c2 243 SUPERFAMILY SSF56281 15 243 6.55E-64 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_00950 c2d0a48933bbcebf2593b45526d731c2 243 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 174 243 2.6E-22 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 C3Y93_00950 c2d0a48933bbcebf2593b45526d731c2 243 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 14 238 5.0E-94 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 C3Y93_08750 30103813f7ca728dc6b2e72012f32435 225 Pfam PF00239 Resolvase, N terminal domain 5 150 1.4E-25 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C3Y93_08750 30103813f7ca728dc6b2e72012f32435 225 Gene3D G3DSA:3.40.50.1390 4 139 1.1E-28 T 14-10-2018 C3Y93_08750 30103813f7ca728dc6b2e72012f32435 225 Pfam PF02796 Helix-turn-helix domain of resolvase 161 198 9.4E-7 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 C3Y93_08750 30103813f7ca728dc6b2e72012f32435 225 SUPERFAMILY SSF53041 1 150 4.05E-27 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 C3Y93_08750 30103813f7ca728dc6b2e72012f32435 225 ProSitePatterns PS00398 Site-specific recombinases signature 2. 62 74 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 C3Y93_08750 30103813f7ca728dc6b2e72012f32435 225 SMART SM00857 3 154 5.1E-34 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C3Y93_08750 30103813f7ca728dc6b2e72012f32435 225 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 C3Y93_08750 30103813f7ca728dc6b2e72012f32435 225 Gene3D G3DSA:1.10.10.60 157 199 2.6E-5 T 14-10-2018 C3Y93_03885 1ce93ad4faf39d60434141be2ed2d00a 626 Gene3D G3DSA:1.10.150.570 566 619 7.4E-21 T 14-10-2018 C3Y93_03885 1ce93ad4faf39d60434141be2ed2d00a 626 Pfam PF01134 Glucose inhibited division protein A 8 396 5.0E-165 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 C3Y93_03885 1ce93ad4faf39d60434141be2ed2d00a 626 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 621 41.6 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 C3Y93_03885 1ce93ad4faf39d60434141be2ed2d00a 626 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 618 2.7E-270 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 C3Y93_03885 1ce93ad4faf39d60434141be2ed2d00a 626 Pfam PF13932 GidA associated domain 402 612 4.1E-74 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 C3Y93_03885 1ce93ad4faf39d60434141be2ed2d00a 626 SMART SM01228 543 614 1.3E-39 T 14-10-2018 C3Y93_03885 1ce93ad4faf39d60434141be2ed2d00a 626 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 C3Y93_03885 1ce93ad4faf39d60434141be2ed2d00a 626 SUPERFAMILY SSF51905 7 261 2.09E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_03885 1ce93ad4faf39d60434141be2ed2d00a 626 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 C3Y93_03885 1ce93ad4faf39d60434141be2ed2d00a 626 Gene3D G3DSA:3.50.50.60 301 458 3.0E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_03885 1ce93ad4faf39d60434141be2ed2d00a 626 Gene3D G3DSA:3.50.50.60 2 222 7.0E-87 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_03885 1ce93ad4faf39d60434141be2ed2d00a 626 Gene3D G3DSA:1.10.10.1800 459 547 8.3E-22 T 14-10-2018 C3Y93_12705 4d5a6a040d6c1ee2331c5653ed65ba45 221 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 62 76 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_12705 4d5a6a040d6c1ee2331c5653ed65ba45 221 SUPERFAMILY SSF55120 12 220 2.4E-59 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_12705 4d5a6a040d6c1ee2331c5653ed65ba45 221 Gene3D G3DSA:3.30.2350.10 7 219 9.3E-66 T 14-10-2018 C3Y93_12705 4d5a6a040d6c1ee2331c5653ed65ba45 221 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 220 1.8E-57 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_12705 4d5a6a040d6c1ee2331c5653ed65ba45 221 Pfam PF00849 RNA pseudouridylate synthase 24 171 1.2E-28 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_09025 ce7529c66bce159d8ca3963053ba6c8f 426 SUPERFAMILY SSF55008 165 228 2.75E-10 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C3Y93_09025 ce7529c66bce159d8ca3963053ba6c8f 426 SUPERFAMILY SSF55008 88 151 8.12E-11 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C3Y93_09025 ce7529c66bce159d8ca3963053ba6c8f 426 Pfam PF01545 Cation efflux family 254 423 2.9E-12 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C3Y93_09025 ce7529c66bce159d8ca3963053ba6c8f 426 SUPERFAMILY SSF161111 250 423 9.29E-31 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3Y93_09025 ce7529c66bce159d8ca3963053ba6c8f 426 Gene3D G3DSA:3.30.70.100 77 155 2.1E-7 T 14-10-2018 C3Y93_09025 ce7529c66bce159d8ca3963053ba6c8f 426 Gene3D G3DSA:3.30.70.100 156 235 9.3E-8 T 14-10-2018 C3Y93_09025 ce7529c66bce159d8ca3963053ba6c8f 426 Gene3D G3DSA:1.20.1510.10 248 425 4.9E-13 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3Y93_11290 2dfc1df9d08e88e613b19b3d601918d4 454 SUPERFAMILY SSF48452 61 250 7.25E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_11290 2dfc1df9d08e88e613b19b3d601918d4 454 SMART SM00028 212 245 9.7E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3Y93_11290 2dfc1df9d08e88e613b19b3d601918d4 454 SMART SM00028 61 94 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C3Y93_11290 2dfc1df9d08e88e613b19b3d601918d4 454 Gene3D G3DSA:1.25.40.10 46 269 1.6E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_12080 df15d081048ffe6067da00864b9aa005 198 Gene3D G3DSA:3.40.50.360 1 196 1.2E-62 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3Y93_12080 df15d081048ffe6067da00864b9aa005 198 Pfam PF03358 NADPH-dependent FMN reductase 12 139 2.3E-8 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 C3Y93_12080 df15d081048ffe6067da00864b9aa005 198 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 C3Y93_12080 df15d081048ffe6067da00864b9aa005 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 5 195 5.4E-44 T 14-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 C3Y93_12080 df15d081048ffe6067da00864b9aa005 198 SUPERFAMILY SSF52218 4 196 1.83E-58 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3Y93_06300 267f998967f17e304f53973d60380b25 271 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 113 233 4.9E-39 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 C3Y93_06300 267f998967f17e304f53973d60380b25 271 Gene3D G3DSA:3.40.630.30 99 240 3.1E-5 T 14-10-2018 C3Y93_06300 267f998967f17e304f53973d60380b25 271 PIRSF PIRSF037208 4 252 2.7E-98 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 C3Y93_06300 267f998967f17e304f53973d60380b25 271 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 11 239 40.123 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 C3Y93_06300 267f998967f17e304f53973d60380b25 271 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 21 91 2.5E-16 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 C3Y93_06300 267f998967f17e304f53973d60380b25 271 SUPERFAMILY SSF55729 84 242 1.09E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3Y93_14140 5289cb810f4deabf468e4dcc8833ae5b 842 Pfam PF03432 Relaxase/Mobilisation nuclease domain 71 210 3.9E-6 T 14-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 C3Y93_07215 ced97c325f3f6c1c6602190b7b57e87b 631 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 3.9E-8 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_07215 ced97c325f3f6c1c6602190b7b57e87b 631 PRINTS PR00702 Acriflavin resistance protein family signature 593 616 3.9E-8 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_07215 ced97c325f3f6c1c6602190b7b57e87b 631 PRINTS PR00702 Acriflavin resistance protein family signature 518 542 3.9E-8 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C3Y93_07215 ced97c325f3f6c1c6602190b7b57e87b 631 Gene3D G3DSA:3.30.70.3400 221 453 1.1E-47 T 14-10-2018 C3Y93_07215 ced97c325f3f6c1c6602190b7b57e87b 631 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 355 609 7.1E-72 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C3Y93_07215 ced97c325f3f6c1c6602190b7b57e87b 631 Gene3D G3DSA:1.20.1640.10 466 621 1.2E-13 T 14-10-2018 C3Y93_07215 ced97c325f3f6c1c6602190b7b57e87b 631 SUPERFAMILY SSF82866 426 624 4.32E-46 T 14-10-2018 C3Y93_07215 ced97c325f3f6c1c6602190b7b57e87b 631 Pfam PF13721 SecD export protein N-terminal TM region 2 102 3.5E-34 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain C3Y93_07215 ced97c325f3f6c1c6602190b7b57e87b 631 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 630 49.801 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 C3Y93_07215 ced97c325f3f6c1c6602190b7b57e87b 631 Gene3D G3DSA:3.30.1360.200 279 447 1.1E-47 T 14-10-2018 C3Y93_07215 ced97c325f3f6c1c6602190b7b57e87b 631 Pfam PF07549 SecD/SecF GG Motif 115 139 2.6E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site C3Y93_07215 ced97c325f3f6c1c6602190b7b57e87b 631 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 616 4.7E-135 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 C3Y93_07215 ced97c325f3f6c1c6602190b7b57e87b 631 Pfam PF02355 Protein export membrane protein 453 619 7.5E-19 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial C3Y93_05905 26da763ff7bdd96730f3c7767c6eee20 445 SUPERFAMILY SSF140490 340 437 3.92E-31 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05905 26da763ff7bdd96730f3c7767c6eee20 445 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 179 194 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05905 26da763ff7bdd96730f3c7767c6eee20 445 SMART SM00928 343 388 5.2E-22 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05905 26da763ff7bdd96730f3c7767c6eee20 445 Gene3D G3DSA:1.20.1440.230 341 443 1.3E-27 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05905 26da763ff7bdd96730f3c7767c6eee20 445 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 356 367 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05905 26da763ff7bdd96730f3c7767c6eee20 445 SUPERFAMILY SSF142019 21 246 4.71E-84 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05905 26da763ff7bdd96730f3c7767c6eee20 445 Pfam PF10531 SLBB domain 260 305 5.1E-7 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05905 26da763ff7bdd96730f3c7767c6eee20 445 Gene3D G3DSA:3.10.20.600 246 340 7.7E-29 T 14-10-2018 C3Y93_05905 26da763ff7bdd96730f3c7767c6eee20 445 SUPERFAMILY SSF142984 255 338 6.67E-21 T 14-10-2018 C3Y93_05905 26da763ff7bdd96730f3c7767c6eee20 445 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 345 428 3.0E-25 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05905 26da763ff7bdd96730f3c7767c6eee20 445 Gene3D G3DSA:3.40.50.11540 64 242 4.9E-78 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05905 26da763ff7bdd96730f3c7767c6eee20 445 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 59 231 5.7E-50 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05905 26da763ff7bdd96730f3c7767c6eee20 445 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 19 430 6.4E-180 T 14-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05855 594d7b9b89119837bac17487e72b11b2 97 Gene3D G3DSA:2.40.50.140 5 77 6.2E-18 T 14-10-2018 C3Y93_05855 594d7b9b89119837bac17487e72b11b2 97 PIRSF PIRSF002599 1 92 1.1E-15 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 C3Y93_05855 594d7b9b89119837bac17487e72b11b2 97 SMART SM00357 7 68 2.6E-9 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 C3Y93_05855 594d7b9b89119837bac17487e72b11b2 97 Pfam PF00313 'Cold-shock' DNA-binding domain 7 66 1.9E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3Y93_05855 594d7b9b89119837bac17487e72b11b2 97 SUPERFAMILY SSF50249 4 67 9.3E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_00010 d45ad5206401a3c63ca41ef7d9610a10 234 Gene3D G3DSA:3.40.50.300 1 158 1.9E-24 T 14-10-2018 C3Y93_00010 d45ad5206401a3c63ca41ef7d9610a10 234 SUPERFAMILY SSF52540 27 195 1.13E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00010 d45ad5206401a3c63ca41ef7d9610a10 234 Pfam PF00308 Bacterial dnaA protein 36 189 1.2E-10 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA C3Y93_00010 d45ad5206401a3c63ca41ef7d9610a10 234 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 3 227 9.3E-59 T 14-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 C3Y93_06165 3876dd98de7817a82ac8a2577261c58a 416 Pfam PF00149 Calcineurin-like phosphoesterase 4 234 5.8E-16 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C3Y93_06165 3876dd98de7817a82ac8a2577261c58a 416 Gene3D G3DSA:3.60.21.10 1 278 7.0E-73 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C3Y93_06165 3876dd98de7817a82ac8a2577261c58a 416 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 5 260 2.5E-53 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 C3Y93_06165 3876dd98de7817a82ac8a2577261c58a 416 SUPERFAMILY SSF56300 5 333 4.75E-49 T 14-10-2018 C3Y93_06165 3876dd98de7817a82ac8a2577261c58a 416 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 288 388 7.3E-9 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain C3Y93_11445 fea8b051fb45312e240fb7c7bfbd5591 359 Pfam PF01734 Patatin-like phospholipase 67 246 1.8E-6 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 C3Y93_11445 fea8b051fb45312e240fb7c7bfbd5591 359 SUPERFAMILY SSF52151 42 273 4.29E-11 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase C3Y93_03220 4b267ab6f65aebbe5b29446d3543da8f 218 Gene3D G3DSA:3.30.70.1450 138 214 5.7E-8 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 C3Y93_03220 4b267ab6f65aebbe5b29446d3543da8f 218 Pfam PF02254 TrkA-N domain 4 119 1.8E-28 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 C3Y93_03220 4b267ab6f65aebbe5b29446d3543da8f 218 SUPERFAMILY SSF116726 134 215 2.09E-8 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 C3Y93_03220 4b267ab6f65aebbe5b29446d3543da8f 218 SUPERFAMILY SSF51735 3 133 1.16E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_03220 4b267ab6f65aebbe5b29446d3543da8f 218 Gene3D G3DSA:3.40.50.720 2 137 9.5E-38 T 14-10-2018 C3Y93_12920 6258b29946ac5307ad6e4662fd01a1ae 285 SUPERFAMILY SSF117892 52 186 8.63E-38 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily C3Y93_12920 6258b29946ac5307ad6e4662fd01a1ae 285 Gene3D G3DSA:3.30.479.30 49 181 1.2E-37 T 14-10-2018 C3Y93_12920 6258b29946ac5307ad6e4662fd01a1ae 285 SMART SM00244 21 179 2.9E-53 T 14-10-2018 IPR001107 Band 7 domain C3Y93_12920 6258b29946ac5307ad6e4662fd01a1ae 285 Pfam PF01145 SPFH domain / Band 7 family 25 195 1.9E-34 T 14-10-2018 IPR001107 Band 7 domain C3Y93_12920 6258b29946ac5307ad6e4662fd01a1ae 285 PRINTS PR00721 Stomatin signature 131 154 7.7E-25 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3Y93_12920 6258b29946ac5307ad6e4662fd01a1ae 285 PRINTS PR00721 Stomatin signature 76 97 7.7E-25 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3Y93_12920 6258b29946ac5307ad6e4662fd01a1ae 285 PRINTS PR00721 Stomatin signature 155 173 7.7E-25 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3Y93_12920 6258b29946ac5307ad6e4662fd01a1ae 285 PRINTS PR00721 Stomatin signature 174 195 7.7E-25 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3Y93_12920 6258b29946ac5307ad6e4662fd01a1ae 285 PRINTS PR00721 Stomatin signature 28 50 7.7E-25 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3Y93_12920 6258b29946ac5307ad6e4662fd01a1ae 285 PRINTS PR00721 Stomatin signature 111 128 7.7E-25 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C3Y93_09120 ff2980dca118bd2315247b05a690d68c 237 Gene3D G3DSA:3.40.1280.10 6 236 2.3E-30 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3Y93_09120 ff2980dca118bd2315247b05a690d68c 237 PIRSF PIRSF015601 1 236 2.2E-45 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 C3Y93_09120 ff2980dca118bd2315247b05a690d68c 237 SUPERFAMILY SSF75217 73 234 3.19E-33 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3Y93_09120 ff2980dca118bd2315247b05a690d68c 237 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 5 230 2.4E-30 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 C3Y93_09120 ff2980dca118bd2315247b05a690d68c 237 Pfam PF04452 RNA methyltransferase 20 233 4.1E-44 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 C3Y93_13580 e96718e5e1b3f5a4cbee2e73753c5146 204 Pfam PF00484 Carbonic anhydrase 45 199 1.1E-37 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 C3Y93_13580 e96718e5e1b3f5a4cbee2e73753c5146 204 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 50 57 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 C3Y93_13580 e96718e5e1b3f5a4cbee2e73753c5146 204 Gene3D G3DSA:3.40.1050.10 1 204 9.0E-63 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 C3Y93_13580 e96718e5e1b3f5a4cbee2e73753c5146 204 SUPERFAMILY SSF53056 2 203 6.28E-53 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 C3Y93_13580 e96718e5e1b3f5a4cbee2e73753c5146 204 SMART SM00947 38 203 1.5E-50 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 C3Y93_05385 675267e4a1e95a44835c2e5cf33d8927 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_05385 675267e4a1e95a44835c2e5cf33d8927 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_05385 675267e4a1e95a44835c2e5cf33d8927 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_05385 675267e4a1e95a44835c2e5cf33d8927 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 7.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_05385 675267e4a1e95a44835c2e5cf33d8927 299 Gene3D G3DSA:3.40.190.10 88 291 2.4E-56 T 14-10-2018 C3Y93_05385 675267e4a1e95a44835c2e5cf33d8927 299 Pfam PF03466 LysR substrate binding domain 97 291 2.2E-18 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_05385 675267e4a1e95a44835c2e5cf33d8927 299 SUPERFAMILY SSF46785 3 81 9.25E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_05385 675267e4a1e95a44835c2e5cf33d8927 299 SUPERFAMILY SSF53850 88 294 2.17E-37 T 14-10-2018 C3Y93_05385 675267e4a1e95a44835c2e5cf33d8927 299 Gene3D G3DSA:3.40.190.10 168 266 2.4E-56 T 14-10-2018 C3Y93_05385 675267e4a1e95a44835c2e5cf33d8927 299 Gene3D G3DSA:1.10.10.10 1 85 5.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_09070 3237cbb0b80c9132d3b4247074ab56aa 314 Pfam PF05275 Copper resistance protein B precursor (CopB) 103 314 1.8E-49 T 14-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 C3Y93_09070 3237cbb0b80c9132d3b4247074ab56aa 314 SUPERFAMILY SSF103515 214 313 3.66E-7 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily C3Y93_07210 8417956d0b9b42d134f89ceda2f60873 109 Pfam PF02699 Preprotein translocase subunit 24 97 7.7E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC C3Y93_07210 8417956d0b9b42d134f89ceda2f60873 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 101 5.9E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC C3Y93_07210 8417956d0b9b42d134f89ceda2f60873 109 SMART SM01323 19 101 1.6E-36 T 14-10-2018 IPR003849 Preprotein translocase YajC C3Y93_07210 8417956d0b9b42d134f89ceda2f60873 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 41 59 6.2E-12 T 14-10-2018 IPR003849 Preprotein translocase YajC C3Y93_07210 8417956d0b9b42d134f89ceda2f60873 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 6.2E-12 T 14-10-2018 IPR003849 Preprotein translocase YajC C3Y93_05875 60d6c73ee140303cf62a42eb6a5cdc9c 631 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 623 3.7E-200 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05875 60d6c73ee140303cf62a42eb6a5cdc9c 631 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 1.7E-20 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05875 60d6c73ee140303cf62a42eb6a5cdc9c 631 Pfam PF00361 Proton-conducting membrane transporter 134 415 4.0E-85 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05875 60d6c73ee140303cf62a42eb6a5cdc9c 631 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 3.5E-50 T 14-10-2018 C3Y93_05875 60d6c73ee140303cf62a42eb6a5cdc9c 631 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 3.5E-50 T 14-10-2018 C3Y93_05875 60d6c73ee140303cf62a42eb6a5cdc9c 631 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 3.5E-50 T 14-10-2018 C3Y93_05875 60d6c73ee140303cf62a42eb6a5cdc9c 631 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 425 444 3.5E-50 T 14-10-2018 C3Y93_05875 60d6c73ee140303cf62a42eb6a5cdc9c 631 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 3.5E-50 T 14-10-2018 C3Y93_05875 60d6c73ee140303cf62a42eb6a5cdc9c 631 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 3.5E-50 T 14-10-2018 C3Y93_05875 60d6c73ee140303cf62a42eb6a5cdc9c 631 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 3.5E-50 T 14-10-2018 C3Y93_05875 60d6c73ee140303cf62a42eb6a5cdc9c 631 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 424 446 1.1E-9 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C3Y93_05875 60d6c73ee140303cf62a42eb6a5cdc9c 631 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 1.1E-9 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C3Y93_05875 60d6c73ee140303cf62a42eb6a5cdc9c 631 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 1.1E-9 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C3Y93_05875 60d6c73ee140303cf62a42eb6a5cdc9c 631 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 1.1E-9 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C3Y93_01630 9da0b11a0b34d9256f3ed456f3dfc3db 815 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 12 789 18.9 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 C3Y93_01630 9da0b11a0b34d9256f3ed456f3dfc3db 815 Pfam PF03968 OstA-like protein 107 239 4.2E-9 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal C3Y93_01630 9da0b11a0b34d9256f3ed456f3dfc3db 815 Pfam PF04453 Organic solvent tolerance protein 347 722 5.6E-82 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 C3Y93_11330 16596f6002cc4de6dde85222ab6f9a93 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 26.448 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 C3Y93_11330 16596f6002cc4de6dde85222ab6f9a93 199 Pfam PF01121 Dephospho-CoA kinase 4 179 1.3E-64 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 C3Y93_11330 16596f6002cc4de6dde85222ab6f9a93 199 SUPERFAMILY SSF52540 1 195 1.58E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11330 16596f6002cc4de6dde85222ab6f9a93 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 1.1E-53 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 C3Y93_11330 16596f6002cc4de6dde85222ab6f9a93 199 Gene3D G3DSA:3.40.50.300 1 199 4.0E-66 T 14-10-2018 C3Y93_09625 e33d269cb83b20b9fecafd7d3c1fcaaa 248 Gene3D G3DSA:3.40.50.720 3 248 1.6E-66 T 14-10-2018 C3Y93_09625 e33d269cb83b20b9fecafd7d3c1fcaaa 248 SUPERFAMILY SSF51735 12 244 1.66E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_09625 e33d269cb83b20b9fecafd7d3c1fcaaa 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3Y93_09625 e33d269cb83b20b9fecafd7d3c1fcaaa 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 4.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09625 e33d269cb83b20b9fecafd7d3c1fcaaa 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 4.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09625 e33d269cb83b20b9fecafd7d3c1fcaaa 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 4.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09625 e33d269cb83b20b9fecafd7d3c1fcaaa 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09625 e33d269cb83b20b9fecafd7d3c1fcaaa 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 4.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09625 e33d269cb83b20b9fecafd7d3c1fcaaa 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 4.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09625 e33d269cb83b20b9fecafd7d3c1fcaaa 248 Pfam PF00106 short chain dehydrogenase 17 213 5.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_00250 3892752f0cccffc106489541d2becd37 342 Pfam PF07650 KH domain 273 327 2.0E-13 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_00250 3892752f0cccffc106489541d2becd37 342 SUPERFAMILY SSF54814 214 340 1.37E-37 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 C3Y93_00250 3892752f0cccffc106489541d2becd37 342 Pfam PF01926 50S ribosome-binding GTPase 42 156 2.6E-26 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_00250 3892752f0cccffc106489541d2becd37 342 Gene3D G3DSA:3.40.50.300 36 214 1.2E-51 T 14-10-2018 C3Y93_00250 3892752f0cccffc106489541d2becd37 342 SUPERFAMILY SSF52540 38 251 3.65E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00250 3892752f0cccffc106489541d2becd37 342 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 42 62 1.4E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_00250 3892752f0cccffc106489541d2becd37 342 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 110 128 1.4E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C3Y93_00250 3892752f0cccffc106489541d2becd37 342 Gene3D G3DSA:3.30.300.20 217 341 5.7E-40 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3Y93_00250 3892752f0cccffc106489541d2becd37 342 Hamap MF_00367 GTPase Era [era]. 37 339 36.361 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_00250 3892752f0cccffc106489541d2becd37 342 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 41 201 8.1E-34 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C3Y93_00250 3892752f0cccffc106489541d2becd37 342 TIGRFAM TIGR00436 era: GTP-binding protein Era 40 322 1.4E-94 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_09675 7c3a76d30086ccc7b69ed70bb4d84dde 160 SUPERFAMILY SSF54534 13 149 5.89E-35 T 14-10-2018 C3Y93_09675 7c3a76d30086ccc7b69ed70bb4d84dde 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 12 146 9.1E-18 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain C3Y93_09675 7c3a76d30086ccc7b69ed70bb4d84dde 160 Gene3D G3DSA:3.10.50.40 11 160 5.7E-38 T 14-10-2018 C3Y93_08820 035536e4fbc220e64db644d548c4872b 304 Gene3D G3DSA:3.40.190.10 166 267 1.1E-49 T 14-10-2018 C3Y93_08820 035536e4fbc220e64db644d548c4872b 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 6.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_08820 035536e4fbc220e64db644d548c4872b 304 Pfam PF03466 LysR substrate binding domain 93 295 7.7E-31 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_08820 035536e4fbc220e64db644d548c4872b 304 SUPERFAMILY SSF46785 6 115 2.59E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_08820 035536e4fbc220e64db644d548c4872b 304 Gene3D G3DSA:3.40.190.10 95 292 1.1E-49 T 14-10-2018 C3Y93_08820 035536e4fbc220e64db644d548c4872b 304 SUPERFAMILY SSF53850 93 296 5.12E-33 T 14-10-2018 C3Y93_08820 035536e4fbc220e64db644d548c4872b 304 Gene3D G3DSA:1.10.10.10 6 91 9.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_04130 ab7d6c7e3b155f92837ca8054ea3b016 280 Gene3D G3DSA:3.40.50.12370 2 280 2.0E-45 T 14-10-2018 C3Y93_04130 ab7d6c7e3b155f92837ca8054ea3b016 280 Pfam PF00582 Universal stress protein family 1 157 5.2E-7 T 14-10-2018 IPR006016 UspA C3Y93_04130 ab7d6c7e3b155f92837ca8054ea3b016 280 Pfam PF00582 Universal stress protein family 216 280 3.3E-11 T 14-10-2018 IPR006016 UspA C3Y93_04130 ab7d6c7e3b155f92837ca8054ea3b016 280 PRINTS PR01438 Universal stress protein signature 258 280 1.2E-8 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_04130 ab7d6c7e3b155f92837ca8054ea3b016 280 PRINTS PR01438 Universal stress protein signature 1 11 1.2E-8 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_04130 ab7d6c7e3b155f92837ca8054ea3b016 280 PRINTS PR01438 Universal stress protein signature 240 252 1.2E-8 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_04130 ab7d6c7e3b155f92837ca8054ea3b016 280 SUPERFAMILY SSF52402 1 157 1.09E-11 T 14-10-2018 C3Y93_04130 ab7d6c7e3b155f92837ca8054ea3b016 280 SUPERFAMILY SSF52402 165 280 6.28E-19 T 14-10-2018 C3Y93_06580 e22a7d9d786d37e9d8fdf664e28a5cd8 141 Gene3D G3DSA:2.20.25.10 1 46 6.8E-20 T 14-10-2018 C3Y93_06580 e22a7d9d786d37e9d8fdf664e28a5cd8 141 SUPERFAMILY SSF82784 1 138 5.76E-42 T 14-10-2018 IPR036102 OsmC/Ohr superfamily C3Y93_06580 e22a7d9d786d37e9d8fdf664e28a5cd8 141 Pfam PF02566 OsmC-like protein 41 137 1.5E-15 T 14-10-2018 IPR003718 OsmC/Ohr family C3Y93_06580 e22a7d9d786d37e9d8fdf664e28a5cd8 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 138 2.3E-54 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 C3Y93_06580 e22a7d9d786d37e9d8fdf664e28a5cd8 141 Gene3D G3DSA:3.30.300.20 47 139 1.1E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3Y93_09770 7d65c1a20020e525331b75ca22e41542 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.1E-26 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_09770 7d65c1a20020e525331b75ca22e41542 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.163 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_09770 7d65c1a20020e525331b75ca22e41542 44 Pfam PF00468 Ribosomal protein L34 1 44 1.8E-25 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_09770 7d65c1a20020e525331b75ca22e41542 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_09770 7d65c1a20020e525331b75ca22e41542 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 2.0E-14 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_11790 7fb77f6c32a049455955123a4a51f21b 300 Gene3D G3DSA:1.10.10.10 1 93 9.0E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_11790 7fb77f6c32a049455955123a4a51f21b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_11790 7fb77f6c32a049455955123a4a51f21b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_11790 7fb77f6c32a049455955123a4a51f21b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_11790 7fb77f6c32a049455955123a4a51f21b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.3E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_11790 7fb77f6c32a049455955123a4a51f21b 300 Gene3D G3DSA:3.40.190.10 94 291 1.3E-48 T 14-10-2018 C3Y93_11790 7fb77f6c32a049455955123a4a51f21b 300 SUPERFAMILY SSF46785 1 86 2.72E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_11790 7fb77f6c32a049455955123a4a51f21b 300 Pfam PF03466 LysR substrate binding domain 87 291 6.5E-35 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_11790 7fb77f6c32a049455955123a4a51f21b 300 Gene3D G3DSA:3.40.190.10 163 267 1.3E-48 T 14-10-2018 C3Y93_11790 7fb77f6c32a049455955123a4a51f21b 300 SUPERFAMILY SSF53850 93 291 2.44E-32 T 14-10-2018 C3Y93_11740 94ffc3049544a04d56a80200d0833ce8 1144 Pfam PF00575 S1 RNA binding domain 36 116 4.5E-10 T 14-10-2018 IPR003029 S1 domain GO:0003676 C3Y93_11740 94ffc3049544a04d56a80200d0833ce8 1144 Gene3D G3DSA:2.40.50.140 31 123 3.8E-28 T 14-10-2018 C3Y93_11740 94ffc3049544a04d56a80200d0833ce8 1144 Hamap MF_00970 Ribonuclease E [rne]. 1 1137 33.542 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 C3Y93_11740 94ffc3049544a04d56a80200d0833ce8 1144 Pfam PF10150 Ribonuclease E/G family 119 388 3.5E-94 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 C3Y93_11740 94ffc3049544a04d56a80200d0833ce8 1144 SMART SM00316 37 117 7.3E-9 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3Y93_11740 94ffc3049544a04d56a80200d0833ce8 1144 Gene3D G3DSA:3.40.1260.20 399 504 1.3E-30 T 14-10-2018 C3Y93_11740 94ffc3049544a04d56a80200d0833ce8 1144 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 3.2E-158 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 C3Y93_11740 94ffc3049544a04d56a80200d0833ce8 1144 SUPERFAMILY SSF50249 40 123 2.11E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_08740 136e3796f2096696d622928d9c71608f 240 SUPERFAMILY SSF53098 85 231 1.77E-23 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_08740 136e3796f2096696d622928d9c71608f 240 Gene3D G3DSA:3.30.420.10 77 237 1.3E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_08740 136e3796f2096696d622928d9c71608f 240 Pfam PF00665 Integrase core domain 89 189 2.1E-9 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C3Y93_09175 7b1c1c78f706ad770269bdfc83b6e022 265 Gene3D G3DSA:3.60.15.10 7 248 1.1E-31 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_09175 7b1c1c78f706ad770269bdfc83b6e022 265 SUPERFAMILY SSF56281 30 251 4.87E-30 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_09175 7b1c1c78f706ad770269bdfc83b6e022 265 Pfam PF00753 Metallo-beta-lactamase superfamily 30 229 8.7E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_09175 7b1c1c78f706ad770269bdfc83b6e022 265 SMART SM00849 32 229 3.0E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_09265 9ef5e0e2cbdb31f2c41f720630a1ebcc 216 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 14 191 2.8E-58 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_09265 9ef5e0e2cbdb31f2c41f720630a1ebcc 216 SUPERFAMILY SSF53271 11 199 1.21E-48 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3Y93_09265 9ef5e0e2cbdb31f2c41f720630a1ebcc 216 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 216 33.026 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C3Y93_09265 9ef5e0e2cbdb31f2c41f720630a1ebcc 216 Pfam PF00156 Phosphoribosyl transferase domain 46 164 1.1E-15 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C3Y93_09265 9ef5e0e2cbdb31f2c41f720630a1ebcc 216 Gene3D G3DSA:3.40.50.2020 7 216 1.5E-75 T 14-10-2018 C3Y93_01710 75a6f72c56bb705b90e2e8161bfacc26 126 SUPERFAMILY SSF54523 42 118 2.51E-13 T 14-10-2018 C3Y93_01710 75a6f72c56bb705b90e2e8161bfacc26 126 TIGRFAM TIGR01707 gspI: type II secretion system protein I 5 101 6.5E-13 T 14-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 C3Y93_01710 75a6f72c56bb705b90e2e8161bfacc26 126 Gene3D G3DSA:3.30.1300.30 33 120 2.1E-10 T 14-10-2018 C3Y93_01710 75a6f72c56bb705b90e2e8161bfacc26 126 Pfam PF02501 Type II secretion system (T2SS), protein I 42 106 8.7E-10 T 14-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 C3Y93_01710 75a6f72c56bb705b90e2e8161bfacc26 126 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.0E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_01710 75a6f72c56bb705b90e2e8161bfacc26 126 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_01710 75a6f72c56bb705b90e2e8161bfacc26 126 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 4.7E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 3.3E-70 T 14-10-2018 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 3.3E-70 T 14-10-2018 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.3E-70 T 14-10-2018 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 44 59 3.3E-70 T 14-10-2018 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 3.3E-70 T 14-10-2018 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 3.3E-70 T 14-10-2018 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 3.3E-70 T 14-10-2018 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 3.3E-70 T 14-10-2018 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 3.3E-70 T 14-10-2018 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 470 6.4E-158 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 SUPERFAMILY SSF55424 348 471 1.65E-37 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 1.1E-34 T 14-10-2018 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.1E-34 T 14-10-2018 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.1E-34 T 14-10-2018 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 1.1E-34 T 14-10-2018 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 1.1E-34 T 14-10-2018 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 461 6.2E-34 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 Gene3D G3DSA:3.50.50.60 5 340 5.9E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 45 55 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 Gene3D G3DSA:3.50.50.60 162 283 5.9E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 SUPERFAMILY SSF51905 1 343 2.82E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 333 2.2E-69 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 Gene3D G3DSA:3.30.390.30 352 477 1.6E-41 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C3Y93_13300 9398d1fc93466d7e00eef1e707e80252 477 PIRSF PIRSF000350 1 469 7.6E-85 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 C3Y93_13330 89ca0d3219d9bc30cfa846b978f459b5 111 Gene3D G3DSA:1.10.10.10 9 111 7.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_13330 89ca0d3219d9bc30cfa846b978f459b5 111 SUPERFAMILY SSF46767 13 96 2.62E-22 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 C3Y93_13330 89ca0d3219d9bc30cfa846b978f459b5 111 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 15 95 1.3E-22 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 C3Y93_13475 1d1a7bde795757372448ea8b086d290c 383 Gene3D G3DSA:1.10.10.10 281 377 3.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_13475 1d1a7bde795757372448ea8b086d290c 383 SUPERFAMILY SSF55781 26 175 1.29E-5 T 14-10-2018 C3Y93_13475 1d1a7bde795757372448ea8b086d290c 383 SUPERFAMILY SSF46894 303 374 9.86E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3Y93_13475 1d1a7bde795757372448ea8b086d290c 383 Pfam PF00196 Bacterial regulatory proteins, luxR family 317 371 3.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_13475 1d1a7bde795757372448ea8b086d290c 383 SMART SM00421 315 372 2.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C3Y93_12745 e9dda86fa58e281dad7ac75c9a046a2b 269 Pfam PF01578 Cytochrome C assembly protein 8 266 2.2E-21 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 C3Y93_11685 b6108865c2b21271ec9305b2b2b9ebb2 328 SUPERFAMILY SSF55681 10 291 1.28E-135 T 14-10-2018 C3Y93_11685 b6108865c2b21271ec9305b2b2b9ebb2 328 Gene3D G3DSA:1.20.58.180 217 297 2.9E-33 T 14-10-2018 C3Y93_11685 b6108865c2b21271ec9305b2b2b9ebb2 328 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 293 60.965 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11685 b6108865c2b21271ec9305b2b2b9ebb2 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 2.4E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11685 b6108865c2b21271ec9305b2b2b9ebb2 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 2.4E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11685 b6108865c2b21271ec9305b2b2b9ebb2 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 2.4E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11685 b6108865c2b21271ec9305b2b2b9ebb2 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 2.4E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11685 b6108865c2b21271ec9305b2b2b9ebb2 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 2.4E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11685 b6108865c2b21271ec9305b2b2b9ebb2 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 2.4E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11685 b6108865c2b21271ec9305b2b2b9ebb2 328 Gene3D G3DSA:3.30.930.10 3 216 6.8E-113 T 14-10-2018 C3Y93_11685 b6108865c2b21271ec9305b2b2b9ebb2 328 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 299 5.5E-161 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11685 b6108865c2b21271ec9305b2b2b9ebb2 328 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 291 3.0E-152 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C3Y93_11920 b777b9856e859f458e4de8d9ec99eced 73 SUPERFAMILY SSF50249 4 71 4.0E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_11920 b777b9856e859f458e4de8d9ec99eced 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 73 27.121 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 C3Y93_11920 b777b9856e859f458e4de8d9ec99eced 73 Gene3D G3DSA:2.40.50.140 2 71 2.0E-37 T 14-10-2018 C3Y93_11920 b777b9856e859f458e4de8d9ec99eced 73 Pfam PF01176 Translation initiation factor 1A / IF-1 8 71 1.4E-28 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 C3Y93_11920 b777b9856e859f458e4de8d9ec99eced 73 SMART SM00316 5 73 1.9E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 C3Y93_11920 b777b9856e859f458e4de8d9ec99eced 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 71 2.3E-38 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 C3Y93_01530 f3f2588cc0945691727f9ea64e3e3dd1 236 SUPERFAMILY SSF52317 30 229 2.45E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_01530 f3f2588cc0945691727f9ea64e3e3dd1 236 Gene3D G3DSA:3.40.50.880 4 231 5.0E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C3Y93_01530 f3f2588cc0945691727f9ea64e3e3dd1 236 Pfam PF00117 Glutamine amidotransferase class-I 30 183 2.7E-16 T 14-10-2018 IPR017926 Glutamine amidotransferase C3Y93_12915 f3aa00758891430c24e4e36e6b80e7dd 496 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 9.0E-116 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 C3Y93_12915 f3aa00758891430c24e4e36e6b80e7dd 496 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site C3Y93_12915 f3aa00758891430c24e4e36e6b80e7dd 496 Gene3D G3DSA:1.20.1730.10 23 496 3.2E-93 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily C3Y93_12915 f3aa00758891430c24e4e36e6b80e7dd 496 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 492 9.6E-219 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 C3Y93_12915 f3aa00758891430c24e4e36e6b80e7dd 496 Pfam PF00474 Sodium:solute symporter family 35 437 3.0E-130 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 C3Y93_04105 df4b29f28c4c777c7b176c38bc35b424 445 Pfam PF00589 Phage integrase family 252 423 1.5E-20 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3Y93_04105 df4b29f28c4c777c7b176c38bc35b424 445 Pfam PF13356 Arm DNA-binding domain 14 100 3.3E-9 T 14-10-2018 IPR025166 Integrase, DNA-binding domain C3Y93_04105 df4b29f28c4c777c7b176c38bc35b424 445 Gene3D G3DSA:1.10.443.10 249 435 2.5E-25 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3Y93_04105 df4b29f28c4c777c7b176c38bc35b424 445 Gene3D G3DSA:3.30.160.390 12 120 7.5E-13 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily C3Y93_04105 df4b29f28c4c777c7b176c38bc35b424 445 SUPERFAMILY SSF56349 153 434 5.3E-47 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3Y93_04105 df4b29f28c4c777c7b176c38bc35b424 445 Gene3D G3DSA:1.10.150.130 146 248 9.7E-9 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C3Y93_02500 a6c747942f72bc52c15b177042f4640a 124 SUPERFAMILY SSF51230 3 122 1.93E-43 T 14-10-2018 IPR011053 Single hybrid motif C3Y93_02500 a6c747942f72bc52c15b177042f4640a 124 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 123 36.598 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 C3Y93_02500 a6c747942f72bc52c15b177042f4640a 124 Gene3D G3DSA:2.40.50.100 1 124 6.8E-48 T 14-10-2018 C3Y93_02500 a6c747942f72bc52c15b177042f4640a 124 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 C3Y93_02500 a6c747942f72bc52c15b177042f4640a 124 Pfam PF01597 Glycine cleavage H-protein 7 122 1.3E-44 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate C3Y93_02500 a6c747942f72bc52c15b177042f4640a 124 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 122 3.1E-49 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 C3Y93_09225 9afe7b9f0d8b00a77d4ab9a2019acbb7 309 Gene3D G3DSA:3.30.470.20 89 289 6.1E-78 T 14-10-2018 C3Y93_09225 9afe7b9f0d8b00a77d4ab9a2019acbb7 309 SUPERFAMILY SSF56059 99 304 2.79E-54 T 14-10-2018 C3Y93_09225 9afe7b9f0d8b00a77d4ab9a2019acbb7 309 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 246 274 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_09225 9afe7b9f0d8b00a77d4ab9a2019acbb7 309 Pfam PF01820 D-ala D-ala ligase N-terminus 9 88 6.4E-17 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_09225 9afe7b9f0d8b00a77d4ab9a2019acbb7 309 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 9 303 4.6E-99 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_09225 9afe7b9f0d8b00a77d4ab9a2019acbb7 309 SUPERFAMILY SSF52440 9 99 1.25E-26 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C3Y93_09225 9afe7b9f0d8b00a77d4ab9a2019acbb7 309 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 8 304 33.968 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_09225 9afe7b9f0d8b00a77d4ab9a2019acbb7 309 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 66 77 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_09225 9afe7b9f0d8b00a77d4ab9a2019acbb7 309 Gene3D G3DSA:3.40.50.20 1 87 1.2E-33 T 14-10-2018 C3Y93_09225 9afe7b9f0d8b00a77d4ab9a2019acbb7 309 Pfam PF07478 D-ala D-ala ligase C-terminus 106 300 1.9E-53 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_09225 9afe7b9f0d8b00a77d4ab9a2019acbb7 309 PIRSF PIRSF039102 41 309 3.8E-80 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_09225 9afe7b9f0d8b00a77d4ab9a2019acbb7 309 PIRSF PIRSF039102 5 49 6.0E-8 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C3Y93_13525 ccdb73b1d22c68fe2fc54e1827843f12 165 Gene3D G3DSA:1.10.287.180 1 76 6.0E-29 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 C3Y93_13525 ccdb73b1d22c68fe2fc54e1827843f12 165 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 3 158 3.0E-70 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 C3Y93_13525 ccdb73b1d22c68fe2fc54e1827843f12 165 Gene3D G3DSA:3.10.50.30 77 159 3.5E-29 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 C3Y93_13525 ccdb73b1d22c68fe2fc54e1827843f12 165 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 25.407 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 C3Y93_13525 ccdb73b1d22c68fe2fc54e1827843f12 165 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 C3Y93_13525 ccdb73b1d22c68fe2fc54e1827843f12 165 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 48.757 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 C3Y93_13525 ccdb73b1d22c68fe2fc54e1827843f12 165 PIRSF PIRSF006092 1 158 4.9E-43 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 C3Y93_13525 ccdb73b1d22c68fe2fc54e1827843f12 165 SUPERFAMILY SSF54534 80 156 1.31E-18 T 14-10-2018 C3Y93_13525 ccdb73b1d22c68fe2fc54e1827843f12 165 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 2.7E-24 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 C3Y93_13525 ccdb73b1d22c68fe2fc54e1827843f12 165 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 C3Y93_13525 ccdb73b1d22c68fe2fc54e1827843f12 165 SUPERFAMILY SSF46557 3 77 2.75E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 C3Y93_13525 ccdb73b1d22c68fe2fc54e1827843f12 165 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 1.5E-21 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 C3Y93_09245 37d1cfd234e2af3f2252171de70e2769 65 Pfam PF12088 Protein of unknown function (DUF3565) 6 62 3.7E-33 T 14-10-2018 IPR021948 Protein of unknown function DUF3565 C3Y93_11285 ded50e9f03757bb9f851c042b20e7033 184 SUPERFAMILY SSF143456 4 184 1.96E-60 T 14-10-2018 C3Y93_11285 ded50e9f03757bb9f851c042b20e7033 184 Gene3D G3DSA:3.40.1740.10 1 184 5.8E-75 T 14-10-2018 C3Y93_11285 ded50e9f03757bb9f851c042b20e7033 184 Pfam PF02622 Uncharacterized ACR, COG1678 15 171 4.6E-45 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 C3Y93_11285 ded50e9f03757bb9f851c042b20e7033 184 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 4 184 33.407 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 C3Y93_03950 2eebfc7eaa52aee3e53251275bea5313 282 Gene3D G3DSA:1.10.8.590 191 274 7.4E-21 T 14-10-2018 C3Y93_03950 2eebfc7eaa52aee3e53251275bea5313 282 Gene3D G3DSA:3.40.1280.10 12 178 1.3E-60 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3Y93_03950 2eebfc7eaa52aee3e53251275bea5313 282 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 14 263 3.2E-64 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 C3Y93_03950 2eebfc7eaa52aee3e53251275bea5313 282 Pfam PF00588 SpoU rRNA Methylase family 16 167 8.1E-33 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 C3Y93_03950 2eebfc7eaa52aee3e53251275bea5313 282 SUPERFAMILY SSF75217 14 173 6.41E-35 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3Y93_03950 2eebfc7eaa52aee3e53251275bea5313 282 PIRSF PIRSF004808 11 268 6.7E-65 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 C3Y93_09500 28c60f10c935d50cbbac2767d75eda8a 299 SMART SM01130 7 296 6.7E-147 T 14-10-2018 IPR002220 DapA-like GO:0016829 C3Y93_09500 28c60f10c935d50cbbac2767d75eda8a 299 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 293 1.3E-111 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_09500 28c60f10c935d50cbbac2767d75eda8a 299 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 294 67.029 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_09500 28c60f10c935d50cbbac2767d75eda8a 299 Gene3D G3DSA:3.20.20.70 7 298 1.3E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_09500 28c60f10c935d50cbbac2767d75eda8a 299 SUPERFAMILY SSF51569 5 297 2.62E-107 T 14-10-2018 C3Y93_09500 28c60f10c935d50cbbac2767d75eda8a 299 Pfam PF00701 Dihydrodipicolinate synthetase family 9 294 8.0E-105 T 14-10-2018 IPR002220 DapA-like GO:0016829 C3Y93_09500 28c60f10c935d50cbbac2767d75eda8a 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 7.8E-37 T 14-10-2018 IPR002220 DapA-like GO:0016829 C3Y93_09500 28c60f10c935d50cbbac2767d75eda8a 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 7.8E-37 T 14-10-2018 IPR002220 DapA-like GO:0016829 C3Y93_09500 28c60f10c935d50cbbac2767d75eda8a 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 7.8E-37 T 14-10-2018 IPR002220 DapA-like GO:0016829 C3Y93_09500 28c60f10c935d50cbbac2767d75eda8a 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 7.8E-37 T 14-10-2018 IPR002220 DapA-like GO:0016829 C3Y93_09500 28c60f10c935d50cbbac2767d75eda8a 299 PIRSF PIRSF001365 3 299 1.6E-97 T 14-10-2018 IPR002220 DapA-like GO:0016829 C3Y93_09500 28c60f10c935d50cbbac2767d75eda8a 299 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 139 169 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 C3Y93_09500 28c60f10c935d50cbbac2767d75eda8a 299 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 44 61 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C3Y93_06105 07a2205852af170c5b9a34d7ef8c84dd 260 Pfam PF01925 Sulfite exporter TauE/SafE 5 253 1.4E-40 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 C3Y93_03570 778f4684eb33b8c30e28b6ae466b0203 153 Gene3D G3DSA:3.10.129.10 4 149 2.7E-46 T 14-10-2018 C3Y93_03570 778f4684eb33b8c30e28b6ae466b0203 153 Pfam PF13279 Thioesterase-like superfamily 24 142 2.0E-13 T 14-10-2018 C3Y93_03570 778f4684eb33b8c30e28b6ae466b0203 153 SUPERFAMILY SSF54637 12 145 2.42E-35 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_13185 96a45d7152e7b5b84d1e9cb52f99c000 424 Gene3D G3DSA:3.40.50.720 157 313 8.4E-40 T 14-10-2018 C3Y93_13185 96a45d7152e7b5b84d1e9cb52f99c000 424 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 28.151 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3Y93_13185 96a45d7152e7b5b84d1e9cb52f99c000 424 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 152 6.4E-47 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3Y93_13185 96a45d7152e7b5b84d1e9cb52f99c000 424 SUPERFAMILY SSF69075 317 413 3.92E-20 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3Y93_13185 96a45d7152e7b5b84d1e9cb52f99c000 424 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 168 306 1.5E-38 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase C3Y93_13185 96a45d7152e7b5b84d1e9cb52f99c000 424 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 413 1.8E-119 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3Y93_13185 96a45d7152e7b5b84d1e9cb52f99c000 424 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 95 118 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3Y93_13185 96a45d7152e7b5b84d1e9cb52f99c000 424 PIRSF PIRSF000445 1 424 2.3E-140 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3Y93_13185 96a45d7152e7b5b84d1e9cb52f99c000 424 Gene3D G3DSA:3.30.460.30 2 154 4.9E-53 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3Y93_13185 96a45d7152e7b5b84d1e9cb52f99c000 424 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 413 1.0E-15 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3Y93_13185 96a45d7152e7b5b84d1e9cb52f99c000 424 SUPERFAMILY SSF51735 159 315 2.52E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_13185 96a45d7152e7b5b84d1e9cb52f99c000 424 SUPERFAMILY SSF69742 1 153 8.63E-45 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C3Y93_07255 f45ad9ad9fcbd4909305134c1f7ee291 261 Gene3D G3DSA:3.90.226.10 2 249 1.0E-66 T 14-10-2018 C3Y93_07255 f45ad9ad9fcbd4909305134c1f7ee291 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 C3Y93_07255 f45ad9ad9fcbd4909305134c1f7ee291 261 SUPERFAMILY SSF52096 3 243 3.81E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_07255 f45ad9ad9fcbd4909305134c1f7ee291 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 220 4.9E-44 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C3Y93_03985 da880d257145fe929d6e957a1e22ef75 135 Pfam PF00581 Rhodanese-like domain 29 125 1.5E-12 T 14-10-2018 IPR001763 Rhodanese-like domain C3Y93_03985 da880d257145fe929d6e957a1e22ef75 135 SMART SM00450 19 129 1.0E-17 T 14-10-2018 IPR001763 Rhodanese-like domain C3Y93_03985 da880d257145fe929d6e957a1e22ef75 135 Gene3D G3DSA:3.40.250.10 1 132 1.8E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3Y93_03985 da880d257145fe929d6e957a1e22ef75 135 SUPERFAMILY SSF52821 8 132 1.83E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3Y93_08705 86302bdd8efd1a8c44608c4be53a3ef8 479 Gene3D G3DSA:1.20.1250.20 245 473 5.1E-19 T 14-10-2018 C3Y93_08705 86302bdd8efd1a8c44608c4be53a3ef8 479 Gene3D G3DSA:1.20.1250.20 17 214 7.1E-35 T 14-10-2018 C3Y93_08705 86302bdd8efd1a8c44608c4be53a3ef8 479 SUPERFAMILY SSF103473 15 464 4.05E-61 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_08705 86302bdd8efd1a8c44608c4be53a3ef8 479 Pfam PF07690 Major Facilitator Superfamily 33 371 3.3E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_03810 0367bd07d99b69ec1e2b93b1cf527a95 205 Gene3D G3DSA:1.20.120.80 17 205 4.5E-52 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03810 0367bd07d99b69ec1e2b93b1cf527a95 205 Pfam PF00510 Cytochrome c oxidase subunit III 18 203 1.2E-14 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03810 0367bd07d99b69ec1e2b93b1cf527a95 205 SUPERFAMILY SSF81452 8 203 4.58E-55 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03810 0367bd07d99b69ec1e2b93b1cf527a95 205 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 23 205 2.6E-78 T 14-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 C3Y93_12650 de369f51d77a6c16d3a1aa28bb090fab 286 Pfam PF06827 Zinc finger found in FPG and IleRS 239 267 4.6E-7 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 C3Y93_12650 de369f51d77a6c16d3a1aa28bb090fab 286 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 111 6.0E-27 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 C3Y93_12650 de369f51d77a6c16d3a1aa28bb090fab 286 SUPERFAMILY SSF46946 128 220 1.7E-29 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 C3Y93_12650 de369f51d77a6c16d3a1aa28bb090fab 286 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 216 2.9E-28 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 C3Y93_12650 de369f51d77a6c16d3a1aa28bb090fab 286 SUPERFAMILY SSF57716 215 267 3.14E-15 T 14-10-2018 C3Y93_12650 de369f51d77a6c16d3a1aa28bb090fab 286 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 266 2.6E-87 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 C3Y93_12650 de369f51d77a6c16d3a1aa28bb090fab 286 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 267 39.183 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 C3Y93_12650 de369f51d77a6c16d3a1aa28bb090fab 286 Gene3D G3DSA:1.10.8.50 129 267 3.8E-45 T 14-10-2018 C3Y93_12650 de369f51d77a6c16d3a1aa28bb090fab 286 SMART SM01232 127 219 3.8E-46 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 C3Y93_12650 de369f51d77a6c16d3a1aa28bb090fab 286 Gene3D G3DSA:3.20.190.10 2 125 5.0E-35 T 14-10-2018 IPR035937 MutM-like, N-terminal C3Y93_12650 de369f51d77a6c16d3a1aa28bb090fab 286 SMART SM00898 2 113 2.8E-43 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 C3Y93_12650 de369f51d77a6c16d3a1aa28bb090fab 286 SUPERFAMILY SSF81624 2 136 4.19E-34 T 14-10-2018 IPR035937 MutM-like, N-terminal C3Y93_05095 831204e81283c9ceb19d8e4d245dd095 580 Gene3D G3DSA:2.40.160.50 198 580 1.6E-94 T 14-10-2018 C3Y93_05095 831204e81283c9ceb19d8e4d245dd095 580 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 225 542 2.0E-94 T 14-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal C3Y93_05095 831204e81283c9ceb19d8e4d245dd095 580 Pfam PF08479 POTRA domain, ShlB-type 91 165 7.0E-22 T 14-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type C3Y93_05095 831204e81283c9ceb19d8e4d245dd095 580 PIRSF PIRSF029745 13 580 5.3E-150 T 14-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 C3Y93_05095 831204e81283c9ceb19d8e4d245dd095 580 Gene3D G3DSA:3.10.20.310 77 165 7.2E-18 T 14-10-2018 C3Y93_05095 831204e81283c9ceb19d8e4d245dd095 580 Pfam PF17287 POTRA domain 167 220 2.4E-15 T 14-10-2018 IPR035251 ShlB, POTRA domain C3Y93_11810 313fe887e637247072f8e907c6881793 271 Pfam PF00106 short chain dehydrogenase 8 195 8.2E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_11810 313fe887e637247072f8e907c6881793 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.6E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_11810 313fe887e637247072f8e907c6881793 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.6E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_11810 313fe887e637247072f8e907c6881793 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.6E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_11810 313fe887e637247072f8e907c6881793 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.6E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_11810 313fe887e637247072f8e907c6881793 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.6E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_11810 313fe887e637247072f8e907c6881793 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.6E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_11810 313fe887e637247072f8e907c6881793 271 Gene3D G3DSA:3.40.50.720 3 264 2.6E-63 T 14-10-2018 C3Y93_11810 313fe887e637247072f8e907c6881793 271 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3Y93_11810 313fe887e637247072f8e907c6881793 271 SUPERFAMILY SSF51735 1 257 1.11E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_09030 3f7f4f176686b690d370681dac58e9d0 130 Pfam PF00376 MerR family regulatory protein 4 41 3.4E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_09030 3f7f4f176686b690d370681dac58e9d0 130 SUPERFAMILY SSF46955 3 125 5.13E-33 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C3Y93_09030 3f7f4f176686b690d370681dac58e9d0 130 Pfam PF09278 MerR, DNA binding 46 110 9.2E-15 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding C3Y93_09030 3f7f4f176686b690d370681dac58e9d0 130 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 3 129 5.1E-64 T 14-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 C3Y93_09030 3f7f4f176686b690d370681dac58e9d0 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 7.9E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_09030 3f7f4f176686b690d370681dac58e9d0 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 7.9E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_09030 3f7f4f176686b690d370681dac58e9d0 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 7.9E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_09030 3f7f4f176686b690d370681dac58e9d0 130 SMART SM00422 3 72 3.1E-24 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_09030 3f7f4f176686b690d370681dac58e9d0 130 Gene3D G3DSA:1.10.1660.10 1 119 1.3E-30 T 14-10-2018 C3Y93_09030 3f7f4f176686b690d370681dac58e9d0 130 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C3Y93_10060 f69c3b33d5958f558219874887aa0e3c 127 SUPERFAMILY SSF48295 13 60 1.57E-11 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 C3Y93_10060 f69c3b33d5958f558219874887aa0e3c 127 Pfam PF01527 Transposase 14 65 9.0E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 C3Y93_01125 f69c3b33d5958f558219874887aa0e3c 127 SUPERFAMILY SSF48295 13 60 1.57E-11 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 C3Y93_01125 f69c3b33d5958f558219874887aa0e3c 127 Pfam PF01527 Transposase 14 65 9.0E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 C3Y93_10030 37e9a19de21f287ed512d2fbe28fd198 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_10030 37e9a19de21f287ed512d2fbe28fd198 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_10030 37e9a19de21f287ed512d2fbe28fd198 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 60 5.7E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_10030 37e9a19de21f287ed512d2fbe28fd198 207 Gene3D G3DSA:1.10.357.10 3 207 8.9E-39 T 14-10-2018 C3Y93_10030 37e9a19de21f287ed512d2fbe28fd198 207 SUPERFAMILY SSF46689 8 88 5.53E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_10905 8c8650dd40b84eb4cd34fef09f8712e8 379 Gene3D G3DSA:3.40.50.1100 17 350 1.1E-115 T 14-10-2018 C3Y93_10905 8c8650dd40b84eb4cd34fef09f8712e8 379 TIGRFAM TIGR00260 thrC: threonine synthase 11 350 4.6E-91 T 14-10-2018 IPR004450 Threonine synthase-like C3Y93_10905 8c8650dd40b84eb4cd34fef09f8712e8 379 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 57 70 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 C3Y93_10905 8c8650dd40b84eb4cd34fef09f8712e8 379 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 343 1.7E-64 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3Y93_10905 8c8650dd40b84eb4cd34fef09f8712e8 379 SUPERFAMILY SSF53686 11 376 2.75E-102 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3Y93_10905 8c8650dd40b84eb4cd34fef09f8712e8 379 PIRSF PIRSF038945 1 375 7.7E-152 T 14-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 C3Y93_10905 8c8650dd40b84eb4cd34fef09f8712e8 379 Gene3D G3DSA:3.40.50.1100 65 161 1.1E-115 T 14-10-2018 C3Y93_07765 774a2883ca33b13d52ae7b828a079092 109 Gene3D G3DSA:3.90.470.10 1 109 3.9E-45 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 C3Y93_07765 774a2883ca33b13d52ae7b828a079092 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07765 774a2883ca33b13d52ae7b828a079092 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.6E-46 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07765 774a2883ca33b13d52ae7b828a079092 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 25.555 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_07765 774a2883ca33b13d52ae7b828a079092 109 SUPERFAMILY SSF54843 1 107 9.29E-42 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 C3Y93_07765 774a2883ca33b13d52ae7b828a079092 109 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 3.6E-36 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 C3Y93_03735 451f11b4a5aafc83033e808de5b128bb 256 Pfam PF00106 short chain dehydrogenase 6 204 8.6E-55 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03735 451f11b4a5aafc83033e808de5b128bb 256 SUPERFAMILY SSF51735 1 253 2.46E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_03735 451f11b4a5aafc83033e808de5b128bb 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.4E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03735 451f11b4a5aafc83033e808de5b128bb 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 4.4E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03735 451f11b4a5aafc83033e808de5b128bb 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 4.4E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03735 451f11b4a5aafc83033e808de5b128bb 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.4E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03735 451f11b4a5aafc83033e808de5b128bb 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 4.4E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03735 451f11b4a5aafc83033e808de5b128bb 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.4E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03735 451f11b4a5aafc83033e808de5b128bb 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 197 3.4E-5 T 14-10-2018 C3Y93_03735 451f11b4a5aafc83033e808de5b128bb 256 Gene3D G3DSA:3.40.50.720 1 255 1.8E-79 T 14-10-2018 C3Y93_03735 451f11b4a5aafc83033e808de5b128bb 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3Y93_03735 451f11b4a5aafc83033e808de5b128bb 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03735 451f11b4a5aafc83033e808de5b128bb 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 1.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_03735 451f11b4a5aafc83033e808de5b128bb 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_09890 3581897e91f0ecd8c33de21df36f893b 304 Pfam PF00413 Matrixin 139 297 6.8E-12 T 14-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 C3Y93_09890 3581897e91f0ecd8c33de21df36f893b 304 Gene3D G3DSA:3.40.390.10 94 304 1.5E-12 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 C3Y93_09890 3581897e91f0ecd8c33de21df36f893b 304 SUPERFAMILY SSF55486 227 302 9.86E-14 T 14-10-2018 C3Y93_09890 3581897e91f0ecd8c33de21df36f893b 304 SMART SM00235 143 303 0.0039 T 14-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 C3Y93_12815 dc8c239a42638a3deeaa82c41cf905d7 269 Gene3D G3DSA:3.40.50.150 42 268 2.0E-28 T 14-10-2018 C3Y93_12815 dc8c239a42638a3deeaa82c41cf905d7 269 SUPERFAMILY SSF53335 39 201 1.99E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_12815 dc8c239a42638a3deeaa82c41cf905d7 269 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 3 267 29.296 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 C3Y93_12815 dc8c239a42638a3deeaa82c41cf905d7 269 Pfam PF13489 Methyltransferase domain 51 194 4.5E-17 T 14-10-2018 C3Y93_12815 dc8c239a42638a3deeaa82c41cf905d7 269 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 11 267 4.3E-64 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 C3Y93_13560 95d7c1815842d06c002c411cf721af67 205 Pfam PF01694 Rhomboid family 41 189 4.7E-25 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 C3Y93_13560 95d7c1815842d06c002c411cf721af67 205 Gene3D G3DSA:1.20.1540.10 4 193 2.7E-28 T 14-10-2018 IPR035952 Rhomboid-like superfamily C3Y93_13560 95d7c1815842d06c002c411cf721af67 205 SUPERFAMILY SSF144091 7 192 1.57E-35 T 14-10-2018 C3Y93_09400 cf6f7df446ae91ba0141b56b1f2df263 341 Pfam PF00665 Integrase core domain 180 285 2.7E-15 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C3Y93_09400 cf6f7df446ae91ba0141b56b1f2df263 341 Gene3D G3DSA:3.30.420.10 172 332 1.6E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_09400 cf6f7df446ae91ba0141b56b1f2df263 341 SUPERFAMILY SSF53098 180 326 1.64E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_09400 cf6f7df446ae91ba0141b56b1f2df263 341 Pfam PF13936 Helix-turn-helix domain 7 51 1.6E-12 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain C3Y93_10900 73fc9e6fdd108dfee1418a65b1736b4f 355 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 216 229 8.1E-12 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3Y93_10900 73fc9e6fdd108dfee1418a65b1736b4f 355 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 189 206 8.1E-12 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3Y93_10900 73fc9e6fdd108dfee1418a65b1736b4f 355 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 137 148 8.1E-12 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3Y93_10900 73fc9e6fdd108dfee1418a65b1736b4f 355 Gene3D G3DSA:3.40.710.10 80 354 1.7E-67 T 14-10-2018 C3Y93_10900 73fc9e6fdd108dfee1418a65b1736b4f 355 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 104 333 1.2E-59 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 C3Y93_10900 73fc9e6fdd108dfee1418a65b1736b4f 355 SUPERFAMILY SSF56601 100 348 8.53E-58 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3Y93_08635 34ba0d6dc415db8696be1597cc914a41 1751 SUPERFAMILY SSF52540 1374 1727 2.12E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_08635 34ba0d6dc415db8696be1597cc914a41 1751 TIGRFAM TIGR03237 dnd_assoc_2: DNA phosphorothioation-dependent restriction protein DptH 4 1269 0.0 T 14-10-2018 IPR017646 DNA phosphorothioation-dependent restriction protein DptH C3Y93_08635 34ba0d6dc415db8696be1597cc914a41 1751 Pfam PF01935 Domain of unknown function DUF87 1397 1604 9.6E-7 T 14-10-2018 IPR002789 Helicase HerA, central domain C3Y93_08635 34ba0d6dc415db8696be1597cc914a41 1751 Gene3D G3DSA:3.40.50.300 1561 1741 3.9E-18 T 14-10-2018 C3Y93_08635 34ba0d6dc415db8696be1597cc914a41 1751 Gene3D G3DSA:3.40.50.300 1391 1474 2.0E-8 T 14-10-2018 C3Y93_03995 cd9fd2d2e2cc2b6afb3d6a567887e541 85 Pfam PF01381 Helix-turn-helix 28 63 7.2E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_03995 cd9fd2d2e2cc2b6afb3d6a567887e541 85 SMART SM00530 26 80 1.1E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_03995 cd9fd2d2e2cc2b6afb3d6a567887e541 85 SUPERFAMILY SSF47413 22 70 4.02E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_03995 cd9fd2d2e2cc2b6afb3d6a567887e541 85 Gene3D G3DSA:1.10.260.40 2 82 8.1E-15 T 14-10-2018 C3Y93_02695 3d32cf1970de3705db5910234db21c89 217 SUPERFAMILY SSF100950 7 212 7.78E-64 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C3Y93_02695 3d32cf1970de3705db5910234db21c89 217 Pfam PF01144 Coenzyme A transferase 9 202 4.3E-39 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 C3Y93_02695 3d32cf1970de3705db5910234db21c89 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 47 55 - T 14-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 C3Y93_02695 3d32cf1970de3705db5910234db21c89 217 Gene3D G3DSA:3.40.1080.10 4 215 4.3E-84 T 14-10-2018 C3Y93_02695 3d32cf1970de3705db5910234db21c89 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 2.9E-88 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 C3Y93_02695 3d32cf1970de3705db5910234db21c89 217 SMART SM00882 9 206 1.7E-64 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 C3Y93_02555 90f3d9defc6aff295c4394ca80755c57 413 Gene3D G3DSA:1.10.540.10 1 135 5.8E-48 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3Y93_02555 90f3d9defc6aff295c4394ca80755c57 413 Gene3D G3DSA:2.40.110.10 136 251 2.1E-43 T 14-10-2018 C3Y93_02555 90f3d9defc6aff295c4394ca80755c57 413 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 138 239 1.2E-18 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3Y93_02555 90f3d9defc6aff295c4394ca80755c57 413 SUPERFAMILY SSF56645 10 264 5.89E-61 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3Y93_02555 90f3d9defc6aff295c4394ca80755c57 413 SUPERFAMILY SSF47203 250 403 3.38E-38 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3Y93_02555 90f3d9defc6aff295c4394ca80755c57 413 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 251 399 1.6E-31 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3Y93_02555 90f3d9defc6aff295c4394ca80755c57 413 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 132 3.2E-13 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C3Y93_02555 90f3d9defc6aff295c4394ca80755c57 413 Gene3D G3DSA:1.20.140.10 252 408 1.0E-33 T 14-10-2018 C3Y93_07630 f7fa80eb485ee60999de4fa98cfc238d 193 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 31 181 8.7E-41 T 14-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria C3Y93_07630 f7fa80eb485ee60999de4fa98cfc238d 193 SUPERFAMILY SSF144091 13 185 7.46E-18 T 14-10-2018 C3Y93_07630 f7fa80eb485ee60999de4fa98cfc238d 193 Gene3D G3DSA:1.20.1540.10 8 184 6.7E-12 T 14-10-2018 IPR035952 Rhomboid-like superfamily C3Y93_07630 f7fa80eb485ee60999de4fa98cfc238d 193 Pfam PF01694 Rhomboid family 42 182 9.7E-10 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 C3Y93_06685 5b1a71c0cbbca548c1d88acd83f9d11c 253 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 66 116 4.7E-8 T 14-10-2018 IPR006260 TonB/TolA, C-terminal C3Y93_06685 5b1a71c0cbbca548c1d88acd83f9d11c 253 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 186 226 4.4E-8 T 14-10-2018 IPR006260 TonB/TolA, C-terminal C3Y93_06685 5b1a71c0cbbca548c1d88acd83f9d11c 253 SUPERFAMILY SSF74653 38 134 1.2E-9 T 14-10-2018 C3Y93_06685 5b1a71c0cbbca548c1d88acd83f9d11c 253 Gene3D G3DSA:3.30.1150.10 143 240 8.0E-8 T 14-10-2018 C3Y93_06685 5b1a71c0cbbca548c1d88acd83f9d11c 253 Gene3D G3DSA:3.30.1150.10 21 140 1.2E-6 T 14-10-2018 C3Y93_06685 5b1a71c0cbbca548c1d88acd83f9d11c 253 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 184 223 2.0E-5 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 C3Y93_06685 5b1a71c0cbbca548c1d88acd83f9d11c 253 SUPERFAMILY SSF74653 151 223 6.41E-8 T 14-10-2018 C3Y93_06685 5b1a71c0cbbca548c1d88acd83f9d11c 253 Pfam PF13103 TonB C terminal 63 126 3.0E-6 T 14-10-2018 C3Y93_06590 1f5989cea1ae2b9c02a875f473584a63 495 SMART SM00382 245 368 1.5E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_06590 1f5989cea1ae2b9c02a875f473584a63 495 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 8 490 7.9E-210 T 14-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 C3Y93_06590 1f5989cea1ae2b9c02a875f473584a63 495 Pfam PF00437 Type II/IV secretion system protein 119 384 1.1E-88 T 14-10-2018 IPR001482 Type II/IV secretion system protein C3Y93_06590 1f5989cea1ae2b9c02a875f473584a63 495 SUPERFAMILY SSF160246 8 70 4.58E-15 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily C3Y93_06590 1f5989cea1ae2b9c02a875f473584a63 495 Gene3D G3DSA:3.40.50.300 218 495 3.6E-116 T 14-10-2018 C3Y93_06590 1f5989cea1ae2b9c02a875f473584a63 495 SUPERFAMILY SSF52540 102 490 1.76E-104 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_06590 1f5989cea1ae2b9c02a875f473584a63 495 Gene3D G3DSA:3.30.450.90 85 217 1.1E-51 T 14-10-2018 C3Y93_06590 1f5989cea1ae2b9c02a875f473584a63 495 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 312 326 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C3Y93_06590 1f5989cea1ae2b9c02a875f473584a63 495 Gene3D G3DSA:3.30.300.160 2 84 1.4E-6 T 14-10-2018 C3Y93_04485 d0b9007d98cd67e55c02a20257c852f9 105 Pfam PF01022 Bacterial regulatory protein, arsR family 12 54 4.2E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3Y93_04485 d0b9007d98cd67e55c02a20257c852f9 105 Gene3D G3DSA:1.10.10.10 1 89 1.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_04485 d0b9007d98cd67e55c02a20257c852f9 105 SUPERFAMILY SSF46785 4 82 5.28E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_04485 d0b9007d98cd67e55c02a20257c852f9 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 3.0E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3Y93_04485 d0b9007d98cd67e55c02a20257c852f9 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 3.0E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3Y93_04485 d0b9007d98cd67e55c02a20257c852f9 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 3.0E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3Y93_04485 d0b9007d98cd67e55c02a20257c852f9 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 3.0E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3Y93_04485 d0b9007d98cd67e55c02a20257c852f9 105 SMART SM00418 5 83 3.5E-24 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C3Y93_14155 e0da56b9641b4952ab62fd94313e93e3 296 Pfam PF07120 Protein of unknown function (DUF1376) 3 86 1.7E-28 T 14-10-2018 IPR010781 Protein of unknown function DUF1376 C3Y93_00700 0e89e44e8b924f513d17bc7357ecbe86 300 Pfam PF00682 HMGL-like 5 276 1.1E-48 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 C3Y93_00700 0e89e44e8b924f513d17bc7357ecbe86 300 Gene3D G3DSA:3.20.20.70 1 298 4.0E-123 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_00700 0e89e44e8b924f513d17bc7357ecbe86 300 SUPERFAMILY SSF51569 1 291 1.79E-67 T 14-10-2018 C3Y93_14080 e51dd566a57c1c93cd94280dddd3c012 93 SUPERFAMILY SSF47413 33 91 2.82E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_14080 e51dd566a57c1c93cd94280dddd3c012 93 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 4 92 2.0E-37 T 14-10-2018 IPR014057 Uncharacterized protein HI1420 C3Y93_14080 e51dd566a57c1c93cd94280dddd3c012 93 Pfam PF01381 Helix-turn-helix 47 91 2.3E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_12420 2526f3c9a0de66c575e8dfbeae274a9f 167 Pfam PF13689 Domain of unknown function (DUF4154) 33 161 1.3E-20 T 14-10-2018 IPR025293 YfiR-like C3Y93_12245 30d21dac13e9238b2722d25d5f202aa7 143 Gene3D G3DSA:3.10.129.10 1 143 3.7E-39 T 14-10-2018 C3Y93_12245 30d21dac13e9238b2722d25d5f202aa7 143 SUPERFAMILY SSF54637 8 136 5.13E-35 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_12245 30d21dac13e9238b2722d25d5f202aa7 143 Pfam PF03061 Thioesterase superfamily 27 99 9.3E-18 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 C3Y93_12485 7b8834b2643fba3e69205bb80e8f326c 322 Gene3D G3DSA:3.40.718.10 2 322 1.6E-114 T 14-10-2018 C3Y93_12485 7b8834b2643fba3e69205bb80e8f326c 322 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 29 316 2.3E-100 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 C3Y93_12485 7b8834b2643fba3e69205bb80e8f326c 322 SUPERFAMILY SSF53659 3 321 2.34E-98 T 14-10-2018 C3Y93_12485 7b8834b2643fba3e69205bb80e8f326c 322 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 320 3.0E-118 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 C3Y93_05415 6937dde9ca3f3864d6c3cd210f741fee 416 Gene3D G3DSA:2.130.10.10 105 305 3.7E-15 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C3Y93_05415 6937dde9ca3f3864d6c3cd210f741fee 416 Gene3D G3DSA:2.130.10.10 313 407 1.9E-13 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C3Y93_05415 6937dde9ca3f3864d6c3cd210f741fee 416 Pfam PF13360 PQQ-like domain 115 182 8.7E-6 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C3Y93_05415 6937dde9ca3f3864d6c3cd210f741fee 416 SUPERFAMILY SSF50974 108 404 2.88E-35 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 Gene3D G3DSA:2.40.37.10 8 350 1.8E-130 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 SUPERFAMILY SSF51419 8 234 2.88E-60 T 14-10-2018 IPR029066 PLP-binding barrel C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 Gene3D G3DSA:3.20.20.10 10 217 1.8E-130 T 14-10-2018 IPR029066 PLP-binding barrel C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 Pfam PF00842 Alanine racemase, C-terminal domain 233 354 7.1E-39 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 PRINTS PR00992 Alanine racemase signature 287 304 8.0E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 PRINTS PR00992 Alanine racemase signature 155 166 8.0E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 PRINTS PR00992 Alanine racemase signature 249 264 8.0E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 PRINTS PR00992 Alanine racemase signature 338 351 8.0E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 PRINTS PR00992 Alanine racemase signature 123 135 8.0E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 PRINTS PR00992 Alanine racemase signature 266 281 8.0E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 PRINTS PR00992 Alanine racemase signature 60 78 8.0E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 PRINTS PR00992 Alanine racemase signature 26 42 8.0E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 PRINTS PR00992 Alanine racemase signature 192 219 8.0E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 TIGRFAM TIGR00492 alr: alanine racemase 2 354 7.7E-99 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.1E-58 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 SUPERFAMILY SSF50621 227 355 1.05E-43 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 SMART SM01005 233 356 6.6E-60 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_03850 3d4e7738e41cbbd9727ca7ecf7be1283 358 Hamap MF_01201 Alanine racemase. 1 356 32.003 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_13890 d798fda183c4bad659e39f1994c2ad96 451 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 93 108 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3Y93_13890 d798fda183c4bad659e39f1994c2ad96 451 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 2.5E-157 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3Y93_13890 d798fda183c4bad659e39f1994c2ad96 451 PRINTS PR00175 Sodium/alanine symporter signature 303 321 2.0E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3Y93_13890 d798fda183c4bad659e39f1994c2ad96 451 PRINTS PR00175 Sodium/alanine symporter signature 351 373 2.0E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3Y93_13890 d798fda183c4bad659e39f1994c2ad96 451 PRINTS PR00175 Sodium/alanine symporter signature 93 115 2.0E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3Y93_13890 d798fda183c4bad659e39f1994c2ad96 451 PRINTS PR00175 Sodium/alanine symporter signature 410 430 2.0E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3Y93_13890 d798fda183c4bad659e39f1994c2ad96 451 PRINTS PR00175 Sodium/alanine symporter signature 212 231 2.0E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3Y93_13890 d798fda183c4bad659e39f1994c2ad96 451 PRINTS PR00175 Sodium/alanine symporter signature 184 202 2.0E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3Y93_13890 d798fda183c4bad659e39f1994c2ad96 451 Pfam PF01235 Sodium:alanine symporter family 56 449 2.8E-155 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 C3Y93_00745 3ed506d0235ae3c92d31b7d3d914b4d4 265 Gene3D G3DSA:3.10.129.90 45 262 7.0E-10 T 14-10-2018 C3Y93_00745 3ed506d0235ae3c92d31b7d3d914b4d4 265 SUPERFAMILY SSF54637 156 252 7.31E-7 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_00745 3ed506d0235ae3c92d31b7d3d914b4d4 265 Pfam PF13622 Thioesterase-like superfamily 30 260 1.3E-25 T 14-10-2018 C3Y93_13730 67517827ae1365896d77c1357b5fbf58 508 Gene3D G3DSA:1.10.620.20 5 508 4.5E-216 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 C3Y93_13730 67517827ae1365896d77c1357b5fbf58 508 Pfam PF04945 YHS domain 423 456 6.9E-11 T 14-10-2018 IPR007029 YHS domain C3Y93_13730 67517827ae1365896d77c1357b5fbf58 508 SUPERFAMILY SSF47240 8 507 5.3E-163 T 14-10-2018 IPR009078 Ferritin-like superfamily C3Y93_13730 67517827ae1365896d77c1357b5fbf58 508 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 27 254 3.8E-69 T 14-10-2018 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 C3Y93_04650 61f09e2a03b7d9883c2c0d3303609a84 335 Gene3D G3DSA:3.30.40.60 181 323 1.5E-11 T 14-10-2018 C3Y93_04650 61f09e2a03b7d9883c2c0d3303609a84 335 SMART SM00507 220 272 1.6E-4 T 14-10-2018 IPR003615 HNH nuclease C3Y93_04650 61f09e2a03b7d9883c2c0d3303609a84 335 Pfam PF13395 HNH endonuclease 232 278 8.2E-9 T 14-10-2018 IPR003615 HNH nuclease C3Y93_09980 3ea52860993b5a578c918b41c94fa2e6 609 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 608 6.6E-255 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3Y93_09980 3ea52860993b5a578c918b41c94fa2e6 609 Pfam PF00920 Dehydratase family 34 605 6.5E-223 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3Y93_09980 3ea52860993b5a578c918b41c94fa2e6 609 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3Y93_09980 3ea52860993b5a578c918b41c94fa2e6 609 SUPERFAMILY SSF143975 3 420 3.01E-137 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3Y93_09980 3ea52860993b5a578c918b41c94fa2e6 609 SUPERFAMILY SSF52016 421 608 3.3E-60 T 14-10-2018 C3Y93_09980 3ea52860993b5a578c918b41c94fa2e6 609 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3Y93_09980 3ea52860993b5a578c918b41c94fa2e6 609 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 608 44.89 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C3Y93_09980 3ea52860993b5a578c918b41c94fa2e6 609 Gene3D G3DSA:3.50.30.80 421 573 7.3E-55 T 14-10-2018 C3Y93_07130 7476fca422e28c4be7f495da7795fe97 176 Gene3D G3DSA:3.30.160.150 28 169 3.1E-34 T 14-10-2018 C3Y93_07130 7476fca422e28c4be7f495da7795fe97 176 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 8 164 17.232 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 C3Y93_12955 3633fc1b55acb5564c2617cc90360f0c 174 SUPERFAMILY SSF46565 53 171 7.33E-16 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C3Y93_12955 3633fc1b55acb5564c2617cc90360f0c 174 PRINTS PR00625 DnaJ domain signature 128 143 1.2E-7 T 14-10-2018 IPR001623 DnaJ domain C3Y93_12955 3633fc1b55acb5564c2617cc90360f0c 174 PRINTS PR00625 DnaJ domain signature 150 170 1.2E-7 T 14-10-2018 IPR001623 DnaJ domain C3Y93_12955 3633fc1b55acb5564c2617cc90360f0c 174 PRINTS PR00625 DnaJ domain signature 110 128 1.2E-7 T 14-10-2018 IPR001623 DnaJ domain C3Y93_12955 3633fc1b55acb5564c2617cc90360f0c 174 SMART SM00271 107 170 1.4E-12 T 14-10-2018 IPR001623 DnaJ domain C3Y93_12955 3633fc1b55acb5564c2617cc90360f0c 174 Gene3D G3DSA:1.10.287.110 92 173 1.3E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C3Y93_12955 3633fc1b55acb5564c2617cc90360f0c 174 Pfam PF00226 DnaJ domain 109 171 9.3E-11 T 14-10-2018 IPR001623 DnaJ domain C3Y93_07260 12efe43de1056b804f0a64ddb92747b7 288 SUPERFAMILY SSF48179 163 286 2.15E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3Y93_07260 12efe43de1056b804f0a64ddb92747b7 288 SUPERFAMILY SSF51735 7 163 1.62E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_07260 12efe43de1056b804f0a64ddb92747b7 288 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 3.5E-22 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 C3Y93_07260 12efe43de1056b804f0a64ddb92747b7 288 Gene3D G3DSA:1.10.1040.10 165 288 2.4E-29 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 C3Y93_07260 12efe43de1056b804f0a64ddb92747b7 288 Gene3D G3DSA:3.40.50.720 2 164 7.6E-42 T 14-10-2018 C3Y93_07260 12efe43de1056b804f0a64ddb92747b7 288 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 162 8.0E-40 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 C3Y93_07260 12efe43de1056b804f0a64ddb92747b7 288 PIRSF PIRSF000103 2 288 1.7E-58 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 C3Y93_13910 f56ac45500a97633a2b77d449d97ce88 212 Pfam PF00561 alpha/beta hydrolase fold 50 129 3.7E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_13910 f56ac45500a97633a2b77d449d97ce88 212 SUPERFAMILY SSF53474 2 200 4.69E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_13910 f56ac45500a97633a2b77d449d97ce88 212 Gene3D G3DSA:3.40.50.1820 1 202 2.2E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_11260 d39822ffa497ae7e512c3d7b3375bfff 195 PIRSF PIRSF000847 4 195 1.3E-46 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 C3Y93_11260 d39822ffa497ae7e512c3d7b3375bfff 195 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 8 193 6.2E-53 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 C3Y93_11260 d39822ffa497ae7e512c3d7b3375bfff 195 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 63 85 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 C3Y93_11260 d39822ffa497ae7e512c3d7b3375bfff 195 Gene3D G3DSA:1.20.120.1760 5 188 2.1E-13 T 14-10-2018 C3Y93_11260 d39822ffa497ae7e512c3d7b3375bfff 195 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 85 1.4E-17 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 C3Y93_06675 7ef1330a292a2934276222436d631b28 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-22 T 14-10-2018 C3Y93_06675 7ef1330a292a2934276222436d631b28 119 Pfam PF00453 Ribosomal protein L20 3 109 6.0E-46 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_06675 7ef1330a292a2934276222436d631b28 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 8.9E-39 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_06675 7ef1330a292a2934276222436d631b28 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 8.9E-39 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_06675 7ef1330a292a2934276222436d631b28 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 8.9E-39 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_06675 7ef1330a292a2934276222436d631b28 119 Gene3D G3DSA:1.10.720.90 2 55 2.1E-23 T 14-10-2018 C3Y93_06675 7ef1330a292a2934276222436d631b28 119 SUPERFAMILY SSF74731 3 117 1.96E-46 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_06675 7ef1330a292a2934276222436d631b28 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.083 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_06675 7ef1330a292a2934276222436d631b28 119 Gene3D G3DSA:1.10.1900.20 56 119 4.5E-25 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_06675 7ef1330a292a2934276222436d631b28 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 3.4E-46 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_06675 7ef1330a292a2934276222436d631b28 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_02030 8336758d25e583af61f02cb633e7bf67 901 SUPERFAMILY SSF50370 760 878 1.97E-17 T 14-10-2018 IPR035992 Ricin B-like lectins C3Y93_02030 8336758d25e583af61f02cb633e7bf67 901 SMART SM00458 756 880 4.2E-6 T 14-10-2018 IPR000772 Ricin B, lectin domain C3Y93_02030 8336758d25e583af61f02cb633e7bf67 901 Gene3D G3DSA:2.80.10.50 755 880 2.5E-14 T 14-10-2018 C3Y93_02030 8336758d25e583af61f02cb633e7bf67 901 Pfam PF10462 Peptidase M66 178 475 4.6E-51 T 14-10-2018 IPR019503 Peptidase M66 domain GO:0004222 C3Y93_02030 8336758d25e583af61f02cb633e7bf67 901 Pfam PF00652 Ricin-type beta-trefoil lectin domain 762 877 6.5E-11 T 14-10-2018 IPR000772 Ricin B, lectin domain C3Y93_06490 b99608dc3042c88f2dd567ffe1d7ee9a 446 PRINTS PR00095 Anthranilate synthase component I signature 292 305 6.4E-8 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3Y93_06490 b99608dc3042c88f2dd567ffe1d7ee9a 446 PRINTS PR00095 Anthranilate synthase component I signature 372 386 6.4E-8 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3Y93_06490 b99608dc3042c88f2dd567ffe1d7ee9a 446 PRINTS PR00095 Anthranilate synthase component I signature 278 291 6.4E-8 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C3Y93_06490 b99608dc3042c88f2dd567ffe1d7ee9a 446 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 96 432 7.6E-99 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 C3Y93_06490 b99608dc3042c88f2dd567ffe1d7ee9a 446 Gene3D G3DSA:3.60.120.10 12 440 3.0E-121 T 14-10-2018 IPR005801 ADC synthase GO:0009058 C3Y93_06490 b99608dc3042c88f2dd567ffe1d7ee9a 446 Pfam PF00425 chorismate binding enzyme 177 430 3.2E-91 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal C3Y93_06490 b99608dc3042c88f2dd567ffe1d7ee9a 446 SUPERFAMILY SSF56322 44 439 1.44E-108 T 14-10-2018 IPR005801 ADC synthase GO:0009058 C3Y93_07525 e5b16cdb3840ae4954d54f2dbab2f552 771 Pfam PF05787 Bacterial protein of unknown function (DUF839) 82 727 7.0E-139 T 14-10-2018 IPR008557 Protein of unknown function DUF839 C3Y93_07525 e5b16cdb3840ae4954d54f2dbab2f552 771 SUPERFAMILY SSF63829 530 730 5.23E-8 T 14-10-2018 C3Y93_03955 6ceffee9d6b53c70500c296f12ac3f62 269 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 6.7E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_03955 6ceffee9d6b53c70500c296f12ac3f62 269 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 8.2E-6 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_03955 6ceffee9d6b53c70500c296f12ac3f62 269 SUPERFAMILY SSF51161 4 168 1.39E-56 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3Y93_03955 6ceffee9d6b53c70500c296f12ac3f62 269 Pfam PF06426 Serine acetyltransferase, N-terminal 3 35 1.5E-4 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 C3Y93_03955 6ceffee9d6b53c70500c296f12ac3f62 269 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 5.2E-76 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 C3Y93_03955 6ceffee9d6b53c70500c296f12ac3f62 269 Gene3D G3DSA:1.10.3130.10 1 66 7.3E-24 T 14-10-2018 C3Y93_03955 6ceffee9d6b53c70500c296f12ac3f62 269 Gene3D G3DSA:2.160.10.10 67 188 5.9E-38 T 14-10-2018 C3Y93_08730 01596d7f5c941ec87be3de5480b57c22 278 SUPERFAMILY SSF53474 39 264 2.5E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_08730 01596d7f5c941ec87be3de5480b57c22 278 Pfam PF07859 alpha/beta hydrolase fold 66 200 2.9E-7 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 C3Y93_08730 01596d7f5c941ec87be3de5480b57c22 278 Gene3D G3DSA:3.40.50.1820 26 269 2.1E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_13025 c1ddb13662c7f27f3c0449bb1737b30e 84 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_13025 c1ddb13662c7f27f3c0449bb1737b30e 84 Pfam PF01016 Ribosomal L27 protein 2 82 9.8E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_13025 c1ddb13662c7f27f3c0449bb1737b30e 84 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.4E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_13025 c1ddb13662c7f27f3c0449bb1737b30e 84 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.4E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_13025 c1ddb13662c7f27f3c0449bb1737b30e 84 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.4E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_13025 c1ddb13662c7f27f3c0449bb1737b30e 84 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_13025 c1ddb13662c7f27f3c0449bb1737b30e 84 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 26.36 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_13025 c1ddb13662c7f27f3c0449bb1737b30e 84 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 2.7E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_13025 c1ddb13662c7f27f3c0449bb1737b30e 84 Gene3D G3DSA:2.40.50.100 21 84 2.0E-30 T 14-10-2018 C3Y93_13025 c1ddb13662c7f27f3c0449bb1737b30e 84 SUPERFAMILY SSF110324 2 80 1.64E-33 T 14-10-2018 C3Y93_13680 f291987f01ee93b29b76a24d23d33ace 155 Gene3D G3DSA:3.40.630.30 1 153 9.6E-24 T 14-10-2018 C3Y93_13680 f291987f01ee93b29b76a24d23d33ace 155 SUPERFAMILY SSF55729 1 137 5.4E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3Y93_13680 f291987f01ee93b29b76a24d23d33ace 155 Pfam PF13673 Acetyltransferase (GNAT) domain 34 145 2.5E-15 T 14-10-2018 IPR000182 GNAT domain C3Y93_11345 586b93d2ed5ae5a928f34f3daab36bdf 570 Gene3D G3DSA:3.40.50.300 294 570 5.8E-106 T 14-10-2018 C3Y93_11345 586b93d2ed5ae5a928f34f3daab36bdf 570 Gene3D G3DSA:3.30.300.160 68 148 9.2E-6 T 14-10-2018 C3Y93_11345 586b93d2ed5ae5a928f34f3daab36bdf 570 Pfam PF00437 Type II/IV secretion system protein 193 459 4.9E-90 T 14-10-2018 IPR001482 Type II/IV secretion system protein C3Y93_11345 586b93d2ed5ae5a928f34f3daab36bdf 570 Gene3D G3DSA:3.30.450.90 156 292 2.7E-48 T 14-10-2018 C3Y93_11345 586b93d2ed5ae5a928f34f3daab36bdf 570 SUPERFAMILY SSF52540 182 568 1.44E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11345 586b93d2ed5ae5a928f34f3daab36bdf 570 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 387 401 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C3Y93_11345 586b93d2ed5ae5a928f34f3daab36bdf 570 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 17 151 5.2E-11 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal C3Y93_11345 586b93d2ed5ae5a928f34f3daab36bdf 570 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 13 569 5.3E-261 T 14-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 C3Y93_11345 586b93d2ed5ae5a928f34f3daab36bdf 570 SUPERFAMILY SSF160246 8 147 7.32E-29 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily C3Y93_00850 293d2fdf546acd458ecff9d8dc8e6907 512 Gene3D G3DSA:3.60.20.10 2 467 3.4E-152 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3Y93_00850 293d2fdf546acd458ecff9d8dc8e6907 512 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.7E-159 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 C3Y93_00850 293d2fdf546acd458ecff9d8dc8e6907 512 PIRSF PIRSF000485 1 483 1.3E-166 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 C3Y93_00850 293d2fdf546acd458ecff9d8dc8e6907 512 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.974 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 C3Y93_00850 293d2fdf546acd458ecff9d8dc8e6907 512 SUPERFAMILY SSF53271 250 485 7.08E-71 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3Y93_00850 293d2fdf546acd458ecff9d8dc8e6907 512 Pfam PF13522 Glutamine amidotransferase domain 61 207 1.1E-16 T 14-10-2018 C3Y93_00850 293d2fdf546acd458ecff9d8dc8e6907 512 Pfam PF00156 Phosphoribosyl transferase domain 276 394 2.3E-9 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C3Y93_00850 293d2fdf546acd458ecff9d8dc8e6907 512 Gene3D G3DSA:3.40.50.2020 275 445 3.4E-152 T 14-10-2018 C3Y93_00850 293d2fdf546acd458ecff9d8dc8e6907 512 SUPERFAMILY SSF56235 2 257 6.09E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C3Y93_13045 5a6d70a623c15c16385c330c3c5ce023 423 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 5.7E-30 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 C3Y93_13045 5a6d70a623c15c16385c330c3c5ce023 423 Gene3D G3DSA:3.30.930.10 105 423 3.5E-119 T 14-10-2018 C3Y93_13045 5a6d70a623c15c16385c330c3c5ce023 423 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 8.9E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3Y93_13045 5a6d70a623c15c16385c330c3c5ce023 423 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 8.9E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3Y93_13045 5a6d70a623c15c16385c330c3c5ce023 423 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 8.9E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3Y93_13045 5a6d70a623c15c16385c330c3c5ce023 423 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 8.9E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3Y93_13045 5a6d70a623c15c16385c330c3c5ce023 423 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 8.9E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3Y93_13045 5a6d70a623c15c16385c330c3c5ce023 423 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 399 1.8E-41 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C3Y93_13045 5a6d70a623c15c16385c330c3c5ce023 423 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 5.3E-173 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3Y93_13045 5a6d70a623c15c16385c330c3c5ce023 423 SUPERFAMILY SSF46589 1 112 1.05E-29 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 C3Y93_13045 5a6d70a623c15c16385c330c3c5ce023 423 PIRSF PIRSF001529 1 423 1.4E-184 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3Y93_13045 5a6d70a623c15c16385c330c3c5ce023 423 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 41.027 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C3Y93_13045 5a6d70a623c15c16385c330c3c5ce023 423 SUPERFAMILY SSF55681 116 417 2.21E-104 T 14-10-2018 C3Y93_13045 5a6d70a623c15c16385c330c3c5ce023 423 Gene3D G3DSA:1.10.287.40 1 104 3.0E-23 T 14-10-2018 C3Y93_12285 f729000f866b64d733c87e8b21072cd2 284 Pfam PF02811 PHP domain 5 226 7.1E-14 T 14-10-2018 IPR004013 PHP domain GO:0003824 C3Y93_12285 f729000f866b64d733c87e8b21072cd2 284 SUPERFAMILY SSF89550 4 267 7.85E-43 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 C3Y93_12285 f729000f866b64d733c87e8b21072cd2 284 Gene3D G3DSA:1.10.150.650 102 175 1.6E-69 T 14-10-2018 C3Y93_12285 f729000f866b64d733c87e8b21072cd2 284 Gene3D G3DSA:3.20.20.140 4 256 1.6E-69 T 14-10-2018 C3Y93_12285 f729000f866b64d733c87e8b21072cd2 284 SMART SM00481 4 69 8.3E-18 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal C3Y93_09660 ccd87c9af29946a680829e72655a9c12 333 SUPERFAMILY SSF52374 18 171 1.52E-32 T 14-10-2018 C3Y93_09660 ccd87c9af29946a680829e72655a9c12 333 SMART SM00904 179 326 3.6E-39 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 C3Y93_09660 ccd87c9af29946a680829e72655a9c12 333 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 321 1.0E-70 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 C3Y93_09660 ccd87c9af29946a680829e72655a9c12 333 Gene3D G3DSA:2.40.30.30 182 331 1.0E-24 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 C3Y93_09660 ccd87c9af29946a680829e72655a9c12 333 PIRSF PIRSF004491 2 332 1.1E-107 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 C3Y93_09660 ccd87c9af29946a680829e72655a9c12 333 Pfam PF01687 Riboflavin kinase 180 321 1.2E-25 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 C3Y93_09660 ccd87c9af29946a680829e72655a9c12 333 Gene3D G3DSA:3.40.50.620 5 181 4.3E-59 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_09660 ccd87c9af29946a680829e72655a9c12 333 Pfam PF06574 FAD synthetase 14 163 1.2E-48 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 C3Y93_09660 ccd87c9af29946a680829e72655a9c12 333 SUPERFAMILY SSF82114 170 328 1.13E-31 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 C3Y93_06765 edc1291a5aa776402fa31e80f834e753 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 130 9.6E-35 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C3Y93_06765 edc1291a5aa776402fa31e80f834e753 162 Gene3D G3DSA:3.30.70.560 3 151 9.7E-48 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C3Y93_06765 edc1291a5aa776402fa31e80f834e753 162 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 86 97 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C3Y93_06765 edc1291a5aa776402fa31e80f834e753 162 SUPERFAMILY SSF55083 4 137 3.4E-45 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C3Y93_06765 edc1291a5aa776402fa31e80f834e753 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 130 1.6E-39 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C3Y93_09900 2be422cfbd8e8b1f244d795b1cb0540c 179 PRINTS PR00773 GrpE protein signature 158 177 6.8E-19 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C3Y93_09900 2be422cfbd8e8b1f244d795b1cb0540c 179 PRINTS PR00773 GrpE protein signature 82 97 6.8E-19 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C3Y93_09900 2be422cfbd8e8b1f244d795b1cb0540c 179 PRINTS PR00773 GrpE protein signature 54 70 6.8E-19 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C3Y93_09900 2be422cfbd8e8b1f244d795b1cb0540c 179 PRINTS PR00773 GrpE protein signature 133 148 6.8E-19 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C3Y93_09900 2be422cfbd8e8b1f244d795b1cb0540c 179 SUPERFAMILY SSF58014 31 126 9.42E-20 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 C3Y93_09900 2be422cfbd8e8b1f244d795b1cb0540c 179 Gene3D G3DSA:2.30.22.10 126 178 1.2E-14 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 C3Y93_09900 2be422cfbd8e8b1f244d795b1cb0540c 179 Pfam PF01025 GrpE 22 178 3.3E-39 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C3Y93_09900 2be422cfbd8e8b1f244d795b1cb0540c 179 ProSitePatterns PS01071 grpE protein signature. 136 177 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C3Y93_09900 2be422cfbd8e8b1f244d795b1cb0540c 179 Gene3D G3DSA:3.90.20.20 22 125 4.0E-19 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 C3Y93_09900 2be422cfbd8e8b1f244d795b1cb0540c 179 Hamap MF_01151 Protein GrpE [grpE]. 4 179 17.316 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C3Y93_09900 2be422cfbd8e8b1f244d795b1cb0540c 179 SUPERFAMILY SSF51064 135 178 1.57E-10 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 C3Y93_00455 8ca526910fcca6d88c9b0877a00dba0d 272 Gene3D G3DSA:2.70.70.10 127 270 9.8E-32 T 14-10-2018 IPR011055 Duplicated hybrid motif C3Y93_00455 8ca526910fcca6d88c9b0877a00dba0d 272 SUPERFAMILY SSF51261 53 269 1.41E-43 T 14-10-2018 IPR011055 Duplicated hybrid motif C3Y93_00455 8ca526910fcca6d88c9b0877a00dba0d 272 Pfam PF01476 LysM domain 54 96 4.5E-14 T 14-10-2018 IPR018392 LysM domain C3Y93_00455 8ca526910fcca6d88c9b0877a00dba0d 272 Pfam PF01551 Peptidase family M23 172 265 2.8E-28 T 14-10-2018 IPR016047 Peptidase M23 C3Y93_00455 8ca526910fcca6d88c9b0877a00dba0d 272 SMART SM00257 53 97 9.1E-13 T 14-10-2018 IPR018392 LysM domain C3Y93_00455 8ca526910fcca6d88c9b0877a00dba0d 272 Gene3D G3DSA:3.10.350.10 53 95 2.1E-14 T 14-10-2018 IPR036779 LysM domain superfamily C3Y93_13670 70cabdd1275edf5a203a21ccbaf0664c 304 SUPERFAMILY SSF52402 8 211 3.45E-74 T 14-10-2018 C3Y93_13670 70cabdd1275edf5a203a21ccbaf0664c 304 Gene3D G3DSA:3.40.50.620 9 214 6.8E-65 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_13670 70cabdd1275edf5a203a21ccbaf0664c 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 11 304 8.3E-161 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 C3Y93_13670 70cabdd1275edf5a203a21ccbaf0664c 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 259 2.2E-64 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 C3Y93_13670 70cabdd1275edf5a203a21ccbaf0664c 304 PIRSF PIRSF002936 1 304 2.2E-157 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 C3Y93_13670 70cabdd1275edf5a203a21ccbaf0664c 304 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 6 304 57.778 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 C3Y93_13080 bed996c4bf5b992848c9de6497b5dbb1 97 SUPERFAMILY SSF117991 11 97 1.96E-21 T 14-10-2018 IPR027471 YbeD-like domain superfamily C3Y93_13080 bed996c4bf5b992848c9de6497b5dbb1 97 ProDom PD061650 JHP0447 HP0495 CJ0253 18 89 8.0E-4 T 14-10-2018 C3Y93_13080 bed996c4bf5b992848c9de6497b5dbb1 97 Pfam PF04359 Protein of unknown function (DUF493) 15 97 8.1E-24 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 C3Y93_13080 bed996c4bf5b992848c9de6497b5dbb1 97 Gene3D G3DSA:3.30.70.260 10 97 2.4E-22 T 14-10-2018 C3Y93_13870 26ef8105e647a926a95c9dee9da5b6ca 252 Gene3D G3DSA:3.40.1390.30 98 223 1.2E-80 T 14-10-2018 C3Y93_13870 26ef8105e647a926a95c9dee9da5b6ca 252 Gene3D G3DSA:3.40.1390.30 7 240 1.2E-80 T 14-10-2018 C3Y93_13870 26ef8105e647a926a95c9dee9da5b6ca 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 3 250 9.9E-63 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 C3Y93_13870 26ef8105e647a926a95c9dee9da5b6ca 252 SUPERFAMILY SSF102705 1 251 4.05E-78 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily C3Y93_13870 26ef8105e647a926a95c9dee9da5b6ca 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 240 2.1E-63 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 C3Y93_06230 548f6de16473948ea0d6ea0ba1df1ede 301 Hamap MF_00082 Acetylglutamate kinase [argB]. 26 288 50.319 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3Y93_06230 548f6de16473948ea0d6ea0ba1df1ede 301 Gene3D G3DSA:3.40.1160.10 3 298 6.0E-99 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3Y93_06230 548f6de16473948ea0d6ea0ba1df1ede 301 PIRSF PIRSF000728 12 295 2.1E-108 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3Y93_06230 548f6de16473948ea0d6ea0ba1df1ede 301 TIGRFAM TIGR00761 argB: acetylglutamate kinase 28 270 6.6E-79 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C3Y93_06230 548f6de16473948ea0d6ea0ba1df1ede 301 SUPERFAMILY SSF53633 6 295 5.76E-94 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C3Y93_06230 548f6de16473948ea0d6ea0ba1df1ede 301 Pfam PF00696 Amino acid kinase family 27 272 5.5E-45 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 Gene3D G3DSA:1.10.560.10 8 521 1.1E-240 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.215 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.3E-94 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 SUPERFAMILY SSF52029 184 376 3.29E-84 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 SUPERFAMILY SSF48592 7 521 1.83E-77 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 Gene3D G3DSA:3.50.7.10 173 379 1.1E-240 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 Gene3D G3DSA:3.30.260.10 138 410 1.1E-240 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 SUPERFAMILY SSF54849 137 204 7.33E-22 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily C3Y93_13470 40a056132733cb5fd95564eae7435acf 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 3.3E-254 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C3Y93_09640 e9d9c7ecd379d116c80408e587385a1a 127 Pfam PF11776 Nickel/cobalt transporter regulator 74 124 8.5E-14 T 14-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB C3Y93_09640 e9d9c7ecd379d116c80408e587385a1a 127 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 71 125 1.0E-8 T 14-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB C3Y93_09640 e9d9c7ecd379d116c80408e587385a1a 127 Gene3D G3DSA:3.10.450.160 53 127 3.5E-13 T 14-10-2018 C3Y93_11420 b6e759dc414a053041fe0c53fa9b6a64 121 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 11 107 4.4E-25 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like C3Y93_06690 418f816980726baafa4bb1c668b43162 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 8 142 1.0E-7 T 14-10-2018 IPR020143 Uncharacterised protein family, RP436 C3Y93_06690 418f816980726baafa4bb1c668b43162 142 Pfam PF09335 SNARE associated Golgi protein 20 137 9.8E-13 T 14-10-2018 IPR032816 SNARE associated Golgi protein C3Y93_12040 3d8cdc7d09e8638b2a2d433c6a729b20 482 PIRSF PIRSF036492 1 482 3.0E-160 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 C3Y93_12040 3d8cdc7d09e8638b2a2d433c6a729b20 482 Gene3D G3DSA:3.40.309.10 230 432 9.6E-153 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C3Y93_12040 3d8cdc7d09e8638b2a2d433c6a729b20 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 254 265 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 C3Y93_12040 3d8cdc7d09e8638b2a2d433c6a729b20 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 226 233 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 C3Y93_12040 3d8cdc7d09e8638b2a2d433c6a729b20 482 Pfam PF00171 Aldehyde dehydrogenase family 13 447 1.5E-92 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3Y93_12040 3d8cdc7d09e8638b2a2d433c6a729b20 482 SUPERFAMILY SSF53720 10 454 1.02E-115 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3Y93_12040 3d8cdc7d09e8638b2a2d433c6a729b20 482 Gene3D G3DSA:3.40.605.10 30 452 9.6E-153 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C3Y93_08055 fc8434dc38d660581f4b8c690b361cf3 410 Gene3D G3DSA:3.40.50.720 15 313 1.4E-106 T 14-10-2018 C3Y93_08055 fc8434dc38d660581f4b8c690b361cf3 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 327 4.3E-35 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 C3Y93_08055 fc8434dc38d660581f4b8c690b361cf3 410 Gene3D G3DSA:3.40.50.720 110 298 1.4E-106 T 14-10-2018 C3Y93_08055 fc8434dc38d660581f4b8c690b361cf3 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 155 182 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 C3Y93_08055 fc8434dc38d660581f4b8c690b361cf3 410 SUPERFAMILY SSF55021 333 409 1.45E-19 T 14-10-2018 C3Y93_08055 fc8434dc38d660581f4b8c690b361cf3 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 120 295 2.8E-52 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 C3Y93_08055 fc8434dc38d660581f4b8c690b361cf3 410 SUPERFAMILY SSF51735 109 296 2.18E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_08055 fc8434dc38d660581f4b8c690b361cf3 410 Gene3D G3DSA:3.30.70.260 329 409 8.7E-31 T 14-10-2018 C3Y93_08055 fc8434dc38d660581f4b8c690b361cf3 410 SUPERFAMILY SSF52283 9 137 2.34E-49 T 14-10-2018 C3Y93_02715 970b5c43e4b5b34a6f1e8cbd6831c1d8 202 Gene3D G3DSA:1.10.357.10 2 191 9.5E-14 T 14-10-2018 C3Y93_02715 970b5c43e4b5b34a6f1e8cbd6831c1d8 202 SUPERFAMILY SSF46689 3 80 1.65E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_02715 970b5c43e4b5b34a6f1e8cbd6831c1d8 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 61 9.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_03210 54e4ae5e00f0e05b2ce78fd2ee193120 223 Gene3D G3DSA:3.30.70.260 127 198 4.9E-73 T 14-10-2018 C3Y93_03210 54e4ae5e00f0e05b2ce78fd2ee193120 223 SUPERFAMILY SSF75445 131 201 2.62E-22 T 14-10-2018 C3Y93_03210 54e4ae5e00f0e05b2ce78fd2ee193120 223 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 51 216 3.3E-59 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 C3Y93_03210 54e4ae5e00f0e05b2ce78fd2ee193120 223 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 10 217 7.1E-65 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 C3Y93_03210 54e4ae5e00f0e05b2ce78fd2ee193120 223 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 7 220 33.23 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 C3Y93_03210 54e4ae5e00f0e05b2ce78fd2ee193120 223 Gene3D G3DSA:3.40.50.1360 11 212 4.9E-73 T 14-10-2018 C3Y93_03210 54e4ae5e00f0e05b2ce78fd2ee193120 223 SUPERFAMILY SSF100950 7 149 4.77E-44 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C3Y93_09725 04cb9a7da49a177989934dc3e909d88f 111 SUPERFAMILY SSF89360 5 100 6.87E-30 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C3Y93_09725 04cb9a7da49a177989934dc3e909d88f 111 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 6 110 2.5E-38 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 C3Y93_09725 04cb9a7da49a177989934dc3e909d88f 111 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 106 8.5E-19 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 C3Y93_09725 04cb9a7da49a177989934dc3e909d88f 111 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 111 32.51 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 C3Y93_09725 04cb9a7da49a177989934dc3e909d88f 111 Gene3D G3DSA:2.60.300.12 5 111 5.9E-34 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C3Y93_09725 04cb9a7da49a177989934dc3e909d88f 111 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 92 109 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 C3Y93_06130 634861695e9997a4c2d9d9b0f935c38f 523 Gene3D G3DSA:3.30.300.30 411 520 4.5E-7 T 14-10-2018 C3Y93_06130 634861695e9997a4c2d9d9b0f935c38f 523 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 14-10-2018 IPR020845 AMP-binding, conserved site C3Y93_06130 634861695e9997a4c2d9d9b0f935c38f 523 SUPERFAMILY SSF56801 4 515 1.44E-81 T 14-10-2018 C3Y93_06130 634861695e9997a4c2d9d9b0f935c38f 523 Pfam PF00501 AMP-binding enzyme 10 415 8.5E-58 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3Y93_06130 634861695e9997a4c2d9d9b0f935c38f 523 Gene3D G3DSA:3.40.50.12780 4 408 8.3E-70 T 14-10-2018 C3Y93_05560 7e20de06cf5a4bfa9262e72cf2fe0a53 340 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 182 4.4E-42 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain C3Y93_05560 7e20de06cf5a4bfa9262e72cf2fe0a53 340 SUPERFAMILY SSF52540 10 196 2.66E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_05560 7e20de06cf5a4bfa9262e72cf2fe0a53 340 Gene3D G3DSA:3.40.50.300 7 203 1.3E-47 T 14-10-2018 C3Y93_11395 d2a4baa3f2decb55c00d512a676becb9 134 Pfam PF02033 Ribosome-binding factor A 6 114 3.5E-31 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 C3Y93_11395 d2a4baa3f2decb55c00d512a676becb9 134 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 117 25.088 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 C3Y93_11395 d2a4baa3f2decb55c00d512a676becb9 134 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 121 1.0E-25 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 C3Y93_11395 d2a4baa3f2decb55c00d512a676becb9 134 Gene3D G3DSA:3.30.300.20 2 111 2.0E-36 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3Y93_11395 d2a4baa3f2decb55c00d512a676becb9 134 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 104 2.0E-48 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 C3Y93_11395 d2a4baa3f2decb55c00d512a676becb9 134 SUPERFAMILY SSF89919 1 119 1.83E-32 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily C3Y93_12935 143157f4d6817c4ef09add8f23bcbb66 217 SUPERFAMILY SSF69593 42 164 7.06E-14 T 14-10-2018 C3Y93_12935 143157f4d6817c4ef09add8f23bcbb66 217 SMART SM00563 55 167 5.2E-13 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3Y93_12935 143157f4d6817c4ef09add8f23bcbb66 217 Pfam PF01553 Acyltransferase 55 160 1.3E-6 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3Y93_11930 c0c2b510884563f5a616768b716a1978 265 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 32.636 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_11930 c0c2b510884563f5a616768b716a1978 265 SUPERFAMILY SSF55120 1 260 8.34E-86 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_11930 c0c2b510884563f5a616768b716a1978 265 PIRSF PIRSF001430 1 254 5.5E-74 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_11930 c0c2b510884563f5a616768b716a1978 265 Gene3D G3DSA:3.30.70.660 107 243 4.5E-47 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 C3Y93_11930 c0c2b510884563f5a616768b716a1978 265 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 239 2.2E-64 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_11930 c0c2b510884563f5a616768b716a1978 265 Pfam PF01416 tRNA pseudouridine synthase 9 104 2.0E-5 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_11930 c0c2b510884563f5a616768b716a1978 265 Pfam PF01416 tRNA pseudouridine synthase 144 246 6.8E-28 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_11930 c0c2b510884563f5a616768b716a1978 265 Gene3D G3DSA:3.30.70.580 1 106 2.0E-33 T 14-10-2018 C3Y93_01005 575397facc3f1f3ceb428de153f6918f 254 Gene3D G3DSA:3.40.30.10 2 103 1.6E-16 T 14-10-2018 C3Y93_01005 575397facc3f1f3ceb428de153f6918f 254 SUPERFAMILY SSF47616 144 202 2.65E-8 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C3Y93_01005 575397facc3f1f3ceb428de153f6918f 254 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 5.2E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C3Y93_01005 575397facc3f1f3ceb428de153f6918f 254 Pfam PF00043 Glutathione S-transferase, C-terminal domain 150 227 3.2E-4 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal C3Y93_01005 575397facc3f1f3ceb428de153f6918f 254 Gene3D G3DSA:1.20.1050.10 128 218 4.0E-8 T 14-10-2018 C3Y93_01005 575397facc3f1f3ceb428de153f6918f 254 SUPERFAMILY SSF52833 2 99 1.54E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_03795 17ec6a6551556069a539aa38cb0b71e5 265 Pfam PF06271 RDD family 103 259 4.2E-21 T 14-10-2018 IPR010432 RDD C3Y93_03795 17ec6a6551556069a539aa38cb0b71e5 265 Pfam PF14237 Domain of unknown function (DUF4339) 4 46 6.1E-16 T 14-10-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 C3Y93_13945 0478df1d91027c56adda4f3f47a87822 366 Pfam PF12698 ABC-2 family transporter protein 19 356 5.6E-34 T 14-10-2018 C3Y93_01270 8025151da418dcc85109ed929ab582fe 84 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 8 79 2.6E-35 T 14-10-2018 IPR019882 Conserved hypothetical protein CHP03643 C3Y93_01270 8025151da418dcc85109ed929ab582fe 84 Pfam PF10985 Protein of unknown function (DUF2805) 10 80 1.5E-34 T 14-10-2018 IPR019882 Conserved hypothetical protein CHP03643 C3Y93_06740 bc38d9d7a6b60844272b861f23746fe3 177 Pfam PF04751 Protein of unknown function (DUF615) 19 168 1.2E-33 T 14-10-2018 IPR006839 Ribosome-associated, YjgA C3Y93_06740 bc38d9d7a6b60844272b861f23746fe3 177 SUPERFAMILY SSF158710 30 173 8.37E-37 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily C3Y93_06740 bc38d9d7a6b60844272b861f23746fe3 177 PIRSF PIRSF016183 3 177 2.1E-43 T 14-10-2018 IPR006839 Ribosome-associated, YjgA C3Y93_06740 bc38d9d7a6b60844272b861f23746fe3 177 Gene3D G3DSA:1.10.60.30 29 102 3.0E-21 T 14-10-2018 C3Y93_06740 bc38d9d7a6b60844272b861f23746fe3 177 Gene3D G3DSA:1.10.60.30 103 174 1.8E-6 T 14-10-2018 C3Y93_10745 9c6e8073d890c84411b6019f642b9cf6 527 SUPERFAMILY SSF54631 297 431 2.68E-20 T 14-10-2018 C3Y93_10745 9c6e8073d890c84411b6019f642b9cf6 527 Pfam PF03471 Transporter associated domain 443 520 1.7E-18 T 14-10-2018 IPR005170 Transporter-associated domain C3Y93_10745 9c6e8073d890c84411b6019f642b9cf6 527 Gene3D G3DSA:3.30.465.10 439 521 5.2E-24 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C3Y93_10745 9c6e8073d890c84411b6019f642b9cf6 527 Gene3D G3DSA:3.10.580.10 293 438 2.8E-37 T 14-10-2018 C3Y93_10745 9c6e8073d890c84411b6019f642b9cf6 527 SMART SM01091 442 522 7.1E-24 T 14-10-2018 IPR005170 Transporter-associated domain C3Y93_10745 9c6e8073d890c84411b6019f642b9cf6 527 SUPERFAMILY SSF56176 442 519 6.54E-19 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3Y93_10745 9c6e8073d890c84411b6019f642b9cf6 527 Pfam PF03741 Integral membrane protein TerC family 16 205 1.2E-50 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 C3Y93_08710 a13a23c07d9e45b9875f26180f2bff3b 358 Gene3D G3DSA:3.60.15.10 9 342 5.1E-52 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_08710 a13a23c07d9e45b9875f26180f2bff3b 358 SUPERFAMILY SSF56281 9 335 9.96E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_08710 a13a23c07d9e45b9875f26180f2bff3b 358 Pfam PF00753 Metallo-beta-lactamase superfamily 30 79 3.0E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_09410 2f85d3d70e66f0bd17b7def3de658511 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 424 1.3E-71 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 C3Y93_09410 2f85d3d70e66f0bd17b7def3de658511 455 Pfam PF01554 MatE 252 412 1.1E-27 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 C3Y93_09410 2f85d3d70e66f0bd17b7def3de658511 455 Pfam PF01554 MatE 23 184 1.5E-32 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 C3Y93_09410 2f85d3d70e66f0bd17b7def3de658511 455 PIRSF PIRSF006603 3 454 2.3E-99 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 C3Y93_00530 1ad1897b377a8e98e92e6c983bf744e3 319 Gene3D G3DSA:1.10.8.300 221 318 2.0E-22 T 14-10-2018 C3Y93_00530 1ad1897b377a8e98e92e6c983bf744e3 319 Gene3D G3DSA:3.40.50.300 41 206 2.2E-40 T 14-10-2018 C3Y93_00530 1ad1897b377a8e98e92e6c983bf744e3 319 PIRSF PIRSF002849 3 319 1.7E-117 T 14-10-2018 C3Y93_00530 1ad1897b377a8e98e92e6c983bf744e3 319 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 60 190 4.0E-59 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 C3Y93_00530 1ad1897b377a8e98e92e6c983bf744e3 319 SUPERFAMILY SSF52540 51 303 1.55E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_04825 162e7daca8580884b6bc31a0e989b62a 171 Gene3D G3DSA:3.30.1330.70 63 171 6.2E-31 T 14-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 C3Y93_04825 162e7daca8580884b6bc31a0e989b62a 171 PIRSF PIRSF001007 23 70 8.6 T 14-10-2018 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 C3Y93_04825 162e7daca8580884b6bc31a0e989b62a 171 PIRSF PIRSF001007 63 171 4.6E-26 T 14-10-2018 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 C3Y93_04825 162e7daca8580884b6bc31a0e989b62a 171 SUPERFAMILY SSF103084 68 170 3.27E-21 T 14-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 C3Y93_04825 162e7daca8580884b6bc31a0e989b62a 171 Pfam PF05866 Endodeoxyribonuclease RusA 69 155 1.9E-12 T 14-10-2018 IPR008822 Holliday junction resolvase RusA-like GO:0000287|GO:0006281|GO:0006310 C3Y93_11335 d5bd22de07692eb89bc55b6c8ef337d8 286 Pfam PF01478 Type IV leader peptidase family 139 247 1.8E-21 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 C3Y93_11335 d5bd22de07692eb89bc55b6c8ef337d8 286 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 21 127 6.6E-32 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal C3Y93_11335 d5bd22de07692eb89bc55b6c8ef337d8 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 227 242 9.8E-26 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial C3Y93_11335 d5bd22de07692eb89bc55b6c8ef337d8 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 147 164 9.8E-26 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial C3Y93_11335 d5bd22de07692eb89bc55b6c8ef337d8 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 215 226 9.8E-26 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial C3Y93_11335 d5bd22de07692eb89bc55b6c8ef337d8 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 204 214 9.8E-26 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial C3Y93_03480 60a76473bb2e76c2320d834733e39171 239 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 226 5.8E-73 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 C3Y93_03480 60a76473bb2e76c2320d834733e39171 239 SUPERFAMILY SSF56300 2 214 5.47E-26 T 14-10-2018 C3Y93_03480 60a76473bb2e76c2320d834733e39171 239 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 3 206 4.4E-8 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 C3Y93_03480 60a76473bb2e76c2320d834733e39171 239 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 239 91.838 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 C3Y93_07050 86cc05c070091d1ad10123e9e32ae098 366 Gene3D G3DSA:3.40.640.10 3 366 2.5E-106 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_07050 86cc05c070091d1ad10123e9e32ae098 366 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 363 4.2E-95 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase C3Y93_07050 86cc05c070091d1ad10123e9e32ae098 366 PIRSF PIRSF000390 1 366 2.5E-102 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase C3Y93_07050 86cc05c070091d1ad10123e9e32ae098 366 SUPERFAMILY SSF53383 5 365 1.99E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_04525 9e708ee0053756ebab6b345a6ead93ea 134 Pfam PF14760 Rnk N-terminus 4 43 3.2E-13 T 14-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain C3Y93_04525 9e708ee0053756ebab6b345a6ead93ea 134 PIRSF PIRSF006092 8 127 1.4E-22 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 C3Y93_04525 9e708ee0053756ebab6b345a6ead93ea 134 Gene3D G3DSA:3.10.50.30 44 134 4.7E-24 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 C3Y93_04525 9e708ee0053756ebab6b345a6ead93ea 134 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 49 125 3.1E-15 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 C3Y93_04525 9e708ee0053756ebab6b345a6ead93ea 134 Gene3D G3DSA:1.10.286.20 1 43 5.7E-11 T 14-10-2018 C3Y93_04525 9e708ee0053756ebab6b345a6ead93ea 134 SUPERFAMILY SSF54534 48 126 3.14E-14 T 14-10-2018 C3Y93_00875 28c3c976a7c59c5fcb718c552a8356a2 124 SUPERFAMILY SSF51316 1 120 9.73E-30 T 14-10-2018 IPR011057 Mss4-like superfamily C3Y93_00875 28c3c976a7c59c5fcb718c552a8356a2 124 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 110 1.5E-15 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 C3Y93_00875 28c3c976a7c59c5fcb718c552a8356a2 124 Gene3D G3DSA:2.170.150.70 2 115 2.5E-15 T 14-10-2018 C3Y93_01570 f1d1a6545336f4faf464b9d727aacfb9 306 Gene3D G3DSA:3.40.190.10 90 292 4.9E-67 T 14-10-2018 C3Y93_01570 f1d1a6545336f4faf464b9d727aacfb9 306 SUPERFAMILY SSF53850 89 298 2.64E-35 T 14-10-2018 C3Y93_01570 f1d1a6545336f4faf464b9d727aacfb9 306 Gene3D G3DSA:3.40.190.10 163 271 4.9E-67 T 14-10-2018 C3Y93_01570 f1d1a6545336f4faf464b9d727aacfb9 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_01570 f1d1a6545336f4faf464b9d727aacfb9 306 Gene3D G3DSA:1.10.10.10 1 89 2.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_01570 f1d1a6545336f4faf464b9d727aacfb9 306 SUPERFAMILY SSF46785 1 112 8.62E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_01570 f1d1a6545336f4faf464b9d727aacfb9 306 Pfam PF03466 LysR substrate binding domain 90 293 2.0E-35 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_12170 aa32a08f731b258a6dbe4e4fb7df5b53 200 SUPERFAMILY SSF51197 14 191 4.4E-5 T 14-10-2018 C3Y93_12170 aa32a08f731b258a6dbe4e4fb7df5b53 200 SMART SM00702 22 194 3.2E-14 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 C3Y93_12170 aa32a08f731b258a6dbe4e4fb7df5b53 200 Gene3D G3DSA:2.60.120.620 11 198 3.8E-48 T 14-10-2018 C3Y93_12170 aa32a08f731b258a6dbe4e4fb7df5b53 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 106 194 1.7E-21 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 C3Y93_01420 9031da3911b8f6489e925ecd1dc15bd4 143 Gene3D G3DSA:2.60.120.380 34 143 1.7E-25 T 14-10-2018 C3Y93_01545 b637c48969d9cc7d62296da7a4ed37ab 331 SUPERFAMILY SSF53474 15 328 1.24E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_01545 b637c48969d9cc7d62296da7a4ed37ab 331 Pfam PF12146 Serine aminopeptidase, S33 55 261 6.0E-21 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 C3Y93_01545 b637c48969d9cc7d62296da7a4ed37ab 331 Gene3D G3DSA:3.40.50.1820 31 329 9.3E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_11585 bb4c48470946bdb2f0fc2ec73d85a527 151 SUPERFAMILY SSF103515 2 151 6.15E-12 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily C3Y93_11585 bb4c48470946bdb2f0fc2ec73d85a527 151 Pfam PF03797 Autotransporter beta-domain 2 131 5.7E-6 T 14-10-2018 IPR005546 Autotransporter beta-domain C3Y93_11585 bb4c48470946bdb2f0fc2ec73d85a527 151 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 4 79 8.0E-6 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 C3Y93_11585 bb4c48470946bdb2f0fc2ec73d85a527 151 Gene3D G3DSA:2.40.128.130 1 151 1.5E-11 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily C3Y93_05925 99da6f6cffbe384dae8b3d9b1b61201d 181 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 120 1.5E-28 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05925 99da6f6cffbe384dae8b3d9b1b61201d 181 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 18.279 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 C3Y93_05925 99da6f6cffbe384dae8b3d9b1b61201d 181 Gene3D G3DSA:1.20.58.1610 1 121 2.8E-33 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_12970 2ad81f37e2b3f7260752d5af65266d67 268 Pfam PF00106 short chain dehydrogenase 10 195 5.2E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12970 2ad81f37e2b3f7260752d5af65266d67 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 3.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12970 2ad81f37e2b3f7260752d5af65266d67 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12970 2ad81f37e2b3f7260752d5af65266d67 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 3.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12970 2ad81f37e2b3f7260752d5af65266d67 268 SUPERFAMILY SSF51735 6 263 4.45E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_12970 2ad81f37e2b3f7260752d5af65266d67 268 Gene3D G3DSA:3.40.50.720 1 268 4.6E-65 T 14-10-2018 C3Y93_12970 2ad81f37e2b3f7260752d5af65266d67 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 189 2.5E-4 T 14-10-2018 C3Y93_12970 2ad81f37e2b3f7260752d5af65266d67 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12970 2ad81f37e2b3f7260752d5af65266d67 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12970 2ad81f37e2b3f7260752d5af65266d67 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12970 2ad81f37e2b3f7260752d5af65266d67 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 4.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12970 2ad81f37e2b3f7260752d5af65266d67 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C3Y93_12970 2ad81f37e2b3f7260752d5af65266d67 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C3Y93_04500 0c0e0d4d23fb51e99f6ad431dbbe71d4 89 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3Y93_04500 0c0e0d4d23fb51e99f6ad431dbbe71d4 89 Pfam PF13237 4Fe-4S dicluster domain 5 55 4.2E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3Y93_04500 0c0e0d4d23fb51e99f6ad431dbbe71d4 89 SUPERFAMILY SSF54862 5 74 3.54E-17 T 14-10-2018 C3Y93_04500 0c0e0d4d23fb51e99f6ad431dbbe71d4 89 Gene3D G3DSA:3.30.70.20 2 81 7.4E-31 T 14-10-2018 C3Y93_04980 b17565eaa15c2be4880b9ffb5f05a0c4 141 Gene3D G3DSA:3.10.180.10 4 128 3.1E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3Y93_04980 b17565eaa15c2be4880b9ffb5f05a0c4 141 SUPERFAMILY SSF54593 11 129 7.65E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3Y93_04980 b17565eaa15c2be4880b9ffb5f05a0c4 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 123 1.8E-13 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain C3Y93_05035 6036e1cee78d42b8e62447fadaedbdcf 278 Gene3D G3DSA:3.20.20.220 1 278 4.9E-91 T 14-10-2018 C3Y93_05035 6036e1cee78d42b8e62447fadaedbdcf 278 Pfam PF02219 Methylenetetrahydrofolate reductase 3 276 9.9E-81 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 C3Y93_05035 6036e1cee78d42b8e62447fadaedbdcf 278 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 7 275 1.3E-92 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 C3Y93_05035 6036e1cee78d42b8e62447fadaedbdcf 278 SUPERFAMILY SSF51730 4 277 1.16E-86 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like C3Y93_09495 dcc64505aba44c4879b278071e630c50 408 Pfam PF07690 Major Facilitator Superfamily 21 367 2.1E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_09495 dcc64505aba44c4879b278071e630c50 408 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 87 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C3Y93_09495 dcc64505aba44c4879b278071e630c50 408 SUPERFAMILY SSF103473 8 406 3.66E-76 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_09495 dcc64505aba44c4879b278071e630c50 408 Gene3D G3DSA:1.20.1250.20 5 214 8.2E-39 T 14-10-2018 C3Y93_09495 dcc64505aba44c4879b278071e630c50 408 Gene3D G3DSA:1.20.1250.20 215 407 2.6E-25 T 14-10-2018 C3Y93_09495 dcc64505aba44c4879b278071e630c50 408 ProSitePatterns PS00217 Sugar transport proteins signature 2. 112 137 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C3Y93_03525 20b7d429069213b9d971005785e00792 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 190 2.5E-43 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3Y93_03525 20b7d429069213b9d971005785e00792 197 Gene3D G3DSA:3.90.950.10 4 196 6.5E-53 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C3Y93_03525 20b7d429069213b9d971005785e00792 197 SUPERFAMILY SSF52972 2 190 3.34E-51 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C3Y93_03525 20b7d429069213b9d971005785e00792 197 Pfam PF02545 Maf-like protein 5 190 5.3E-41 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3Y93_03525 20b7d429069213b9d971005785e00792 197 PIRSF PIRSF006305 1 196 1.3E-40 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3Y93_03525 20b7d429069213b9d971005785e00792 197 Hamap MF_00528 Septum formation protein Maf [maf]. 5 196 23.169 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C3Y93_09100 f238962b6acb16023eb67894e46f1865 246 Pfam PF13835 Domain of unknown function (DUF4194) 79 244 6.2E-40 T 14-10-2018 IPR025449 Protein of unknown function DUF4194 C3Y93_03880 b3ab6ae732a7da6f60bd07abafd8c188 332 Pfam PF13280 WYL domain 158 330 5.0E-25 T 14-10-2018 IPR026881 WYL domain C3Y93_03880 b3ab6ae732a7da6f60bd07abafd8c188 332 SUPERFAMILY SSF46785 14 57 3.19E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_11125 64b591723658382dc4677ceef0065332 168 SUPERFAMILY SSF160369 5 162 6.93E-44 T 14-10-2018 C3Y93_11125 64b591723658382dc4677ceef0065332 168 Pfam PF00466 Ribosomal protein L10 6 103 1.5E-24 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 C3Y93_11125 64b591723658382dc4677ceef0065332 168 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 163 25.949 T 14-10-2018 IPR022973 Ribosomal protein L10 C3Y93_11125 64b591723658382dc4677ceef0065332 168 Gene3D G3DSA:3.30.70.1730 1 126 4.5E-32 T 14-10-2018 C3Y93_11125 64b591723658382dc4677ceef0065332 168 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_10570 d1356d00d629f575223ce9c8c2c46ddd 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.358 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 C3Y93_10570 d1356d00d629f575223ce9c8c2c46ddd 156 SUPERFAMILY SSF81573 63 121 8.5E-12 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily C3Y93_10570 d1356d00d629f575223ce9c8c2c46ddd 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.9E-45 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 C3Y93_10570 d1356d00d629f575223ce9c8c2c46ddd 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 4.0E-35 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 C3Y93_10570 d1356d00d629f575223ce9c8c2c46ddd 156 Gene3D G3DSA:1.20.5.620 62 122 6.3E-14 T 14-10-2018 C3Y93_11055 f3bab551feb1fcc30700275102bb347e 751 Gene3D G3DSA:3.30.1370.120 24 186 8.3E-53 T 14-10-2018 IPR038591 NolW-like superfamily C3Y93_11055 f3bab551feb1fcc30700275102bb347e 751 Gene3D G3DSA:3.30.1370.120 191 258 4.0E-16 T 14-10-2018 IPR038591 NolW-like superfamily C3Y93_11055 f3bab551feb1fcc30700275102bb347e 751 Pfam PF00263 Bacterial type II and III secretion system protein 477 640 2.9E-47 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 C3Y93_11055 f3bab551feb1fcc30700275102bb347e 751 PRINTS PR00811 Bacterial general secretion pathway protein D signature 628 642 2.1E-31 T 14-10-2018 IPR001775 GspD/PilQ family C3Y93_11055 f3bab551feb1fcc30700275102bb347e 751 PRINTS PR00811 Bacterial general secretion pathway protein D signature 605 623 2.1E-31 T 14-10-2018 IPR001775 GspD/PilQ family C3Y93_11055 f3bab551feb1fcc30700275102bb347e 751 PRINTS PR00811 Bacterial general secretion pathway protein D signature 473 497 2.1E-31 T 14-10-2018 IPR001775 GspD/PilQ family C3Y93_11055 f3bab551feb1fcc30700275102bb347e 751 PRINTS PR00811 Bacterial general secretion pathway protein D signature 508 518 2.1E-31 T 14-10-2018 IPR001775 GspD/PilQ family C3Y93_11055 f3bab551feb1fcc30700275102bb347e 751 PRINTS PR00811 Bacterial general secretion pathway protein D signature 387 397 2.1E-31 T 14-10-2018 IPR001775 GspD/PilQ family C3Y93_11055 f3bab551feb1fcc30700275102bb347e 751 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 34 650 7.7E-161 T 14-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 C3Y93_11055 f3bab551feb1fcc30700275102bb347e 751 Pfam PF03958 Bacterial type II/III secretion system short domain 268 387 1.9E-13 T 14-10-2018 IPR005644 NolW-like C3Y93_11055 f3bab551feb1fcc30700275102bb347e 751 Pfam PF03958 Bacterial type II/III secretion system short domain 193 261 4.4E-12 T 14-10-2018 IPR005644 NolW-like C3Y93_11055 f3bab551feb1fcc30700275102bb347e 751 Pfam PF03958 Bacterial type II/III secretion system short domain 129 185 4.5E-9 T 14-10-2018 IPR005644 NolW-like C3Y93_10375 f509968d5b917c3cb04024e07b8be663 315 Pfam PF05726 Pirin C-terminal cupin domain 190 286 2.7E-16 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 C3Y93_10375 f509968d5b917c3cb04024e07b8be663 315 Gene3D G3DSA:2.60.120.10 17 263 5.7E-62 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3Y93_10375 f509968d5b917c3cb04024e07b8be663 315 Pfam PF02678 Pirin 40 138 1.4E-28 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 C3Y93_10375 f509968d5b917c3cb04024e07b8be663 315 SUPERFAMILY SSF51182 34 301 8.35E-68 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C3Y93_10375 f509968d5b917c3cb04024e07b8be663 315 PIRSF PIRSF006232 19 299 6.1E-74 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 C3Y93_04160 5275b04af692d5048b66499dee757a4e 179 PIRSF PIRSF006118 2 175 2.4E-61 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C3Y93_04160 5275b04af692d5048b66499dee757a4e 179 SUPERFAMILY SSF56784 10 171 2.85E-39 T 14-10-2018 IPR036412 HAD-like superfamily C3Y93_04160 5275b04af692d5048b66499dee757a4e 179 Gene3D G3DSA:3.40.50.1000 2 176 2.3E-52 T 14-10-2018 IPR023214 HAD superfamily C3Y93_04160 5275b04af692d5048b66499dee757a4e 179 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 14 164 1.6E-47 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C3Y93_04160 5275b04af692d5048b66499dee757a4e 179 Pfam PF08282 haloacid dehalogenase-like hydrolase 87 146 6.5E-9 T 14-10-2018 C3Y93_06200 377ed2057d0412bfadab89409fa03679 132 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 117 28.899 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE C3Y93_06200 377ed2057d0412bfadab89409fa03679 132 Pfam PF04355 SmpA / OmlA family 30 106 1.3E-22 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 C3Y93_06200 377ed2057d0412bfadab89409fa03679 132 Gene3D G3DSA:3.30.1450.10 29 117 1.1E-22 T 14-10-2018 IPR037873 BamE-like C3Y93_11275 511cc3fec0a2dddffdb6c71d4434f953 260 SMART SM00346 3 94 0.0049 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 C3Y93_11275 511cc3fec0a2dddffdb6c71d4434f953 260 SUPERFAMILY SSF55781 80 246 1.96E-25 T 14-10-2018 C3Y93_11275 511cc3fec0a2dddffdb6c71d4434f953 260 SUPERFAMILY SSF46785 4 73 6.07E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_11275 511cc3fec0a2dddffdb6c71d4434f953 260 Gene3D G3DSA:3.30.450.40 76 243 1.4E-22 T 14-10-2018 IPR029016 GAF-like domain superfamily C3Y93_11275 511cc3fec0a2dddffdb6c71d4434f953 260 Pfam PF01614 Bacterial transcriptional regulator 129 246 1.2E-14 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal C3Y93_11275 511cc3fec0a2dddffdb6c71d4434f953 260 Pfam PF09339 IclR helix-turn-helix domain 8 54 6.0E-7 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 C3Y93_11275 511cc3fec0a2dddffdb6c71d4434f953 260 Gene3D G3DSA:1.10.10.10 2 75 1.7E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_05985 8c513fb1332f3c1d9135daec813f439f 459 SUPERFAMILY SSF52777 79 148 6.67E-5 T 14-10-2018 C3Y93_05985 8c513fb1332f3c1d9135daec813f439f 459 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 4 446 1.8E-156 T 14-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 C3Y93_05985 8c513fb1332f3c1d9135daec813f439f 459 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 4 261 3.3E-66 T 14-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 C3Y93_05985 8c513fb1332f3c1d9135daec813f439f 459 Pfam PF06974 Protein of unknown function (DUF1298) 300 443 5.1E-41 T 14-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 C3Y93_07860 c2ff3959a433c1fc76fabe8f234c1c3b 211 Gene3D G3DSA:3.40.50.2020 83 211 4.5E-16 T 14-10-2018 C3Y93_07860 c2ff3959a433c1fc76fabe8f234c1c3b 211 Pfam PF00156 Phosphoribosyl transferase domain 118 208 3.8E-11 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C3Y93_07860 c2ff3959a433c1fc76fabe8f234c1c3b 211 SUPERFAMILY SSF53271 52 208 2.07E-22 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C3Y93_01600 32f5df44e24a231878931bd0495be334 304 SUPERFAMILY SSF55120 88 299 2.72E-49 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_01600 32f5df44e24a231878931bd0495be334 304 Gene3D G3DSA:3.30.2350.10 88 301 4.1E-45 T 14-10-2018 C3Y93_01600 32f5df44e24a231878931bd0495be334 304 Pfam PF00849 RNA pseudouridylate synthase 103 249 1.7E-26 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_01600 32f5df44e24a231878931bd0495be334 304 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_06745 c856660b769e6eac8b4722a0322e21be 89 Gene3D G3DSA:3.30.1340.10 1 88 4.9E-26 T 14-10-2018 IPR035895 HPr-like superfamily C3Y93_06745 c856660b769e6eac8b4722a0322e21be 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.4E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C3Y93_06745 c856660b769e6eac8b4722a0322e21be 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.4E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C3Y93_06745 c856660b769e6eac8b4722a0322e21be 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.4E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C3Y93_06745 c856660b769e6eac8b4722a0322e21be 89 SUPERFAMILY SSF55594 1 87 4.19E-24 T 14-10-2018 IPR035895 HPr-like superfamily C3Y93_06745 c856660b769e6eac8b4722a0322e21be 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 4.7E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C3Y93_06745 c856660b769e6eac8b4722a0322e21be 89 Pfam PF00381 PTS HPr component phosphorylation site 4 82 2.0E-23 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C3Y93_07515 f01b758ac937c69397e25e16830f82c3 154 Pfam PF02416 mttA/Hcf106 family 4 49 4.0E-9 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 C3Y93_07515 f01b758ac937c69397e25e16830f82c3 154 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 8.7E-19 T 14-10-2018 C3Y93_07515 f01b758ac937c69397e25e16830f82c3 154 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 8.7E-19 T 14-10-2018 C3Y93_07515 f01b758ac937c69397e25e16830f82c3 154 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 8.7E-19 T 14-10-2018 C3Y93_07515 f01b758ac937c69397e25e16830f82c3 154 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 123 15.472 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 C3Y93_07515 f01b758ac937c69397e25e16830f82c3 154 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 79 1.4E-24 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 C3Y93_04710 710c199d6781c9272d123bc8058ce64f 171 Gene3D G3DSA:1.20.141.10 2 171 2.4E-53 T 14-10-2018 C3Y93_04710 710c199d6781c9272d123bc8058ce64f 171 Pfam PF05838 Glycosyl hydrolase 108 8 95 2.1E-18 T 14-10-2018 IPR008565 Protein of unknown function DUF847 C3Y93_04710 710c199d6781c9272d123bc8058ce64f 171 Pfam PF09374 Predicted Peptidoglycan domain 98 160 4.3E-12 T 14-10-2018 IPR018537 Peptidoglycan binding domain C3Y93_04710 710c199d6781c9272d123bc8058ce64f 171 SUPERFAMILY SSF53955 2 167 2.76E-45 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3Y93_10970 124dbe807bdeec1877ade83bff3d3bd8 206 Gene3D G3DSA:3.90.79.10 4 205 7.7E-50 T 14-10-2018 C3Y93_10970 124dbe807bdeec1877ade83bff3d3bd8 206 SUPERFAMILY SSF55811 16 199 3.11E-39 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C3Y93_10970 124dbe807bdeec1877ade83bff3d3bd8 206 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C3Y93_10970 124dbe807bdeec1877ade83bff3d3bd8 206 Pfam PF00293 NUDIX domain 55 190 5.1E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C3Y93_10970 124dbe807bdeec1877ade83bff3d3bd8 206 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 13 197 1.1E-40 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 C3Y93_06750 4f2297338d549dff289b939996ff453a 283 PIRSF PIRSF005052 2 283 5.2E-111 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 C3Y93_06750 4f2297338d549dff289b939996ff453a 283 SUPERFAMILY SSF52540 2 162 6.15E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_06750 4f2297338d549dff289b939996ff453a 283 Gene3D G3DSA:3.40.50.300 1 159 6.2E-5 T 14-10-2018 C3Y93_06750 4f2297338d549dff289b939996ff453a 283 Pfam PF03668 P-loop ATPase protein family 4 280 8.7E-88 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 C3Y93_06750 4f2297338d549dff289b939996ff453a 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 2 281 38.185 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 C3Y93_00450 962fe650af48c6bba79b965bcb021d21 258 SUPERFAMILY SSF64167 2 254 4.32E-76 T 14-10-2018 C3Y93_00450 962fe650af48c6bba79b965bcb021d21 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 258 35.647 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 C3Y93_00450 962fe650af48c6bba79b965bcb021d21 258 Pfam PF01975 Survival protein SurE 3 186 7.0E-56 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 C3Y93_00450 962fe650af48c6bba79b965bcb021d21 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 2 242 6.7E-67 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 C3Y93_00450 962fe650af48c6bba79b965bcb021d21 258 Gene3D G3DSA:3.40.1210.10 1 258 3.2E-83 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 C3Y93_08335 2be7f7c8586a89390cb881600cef4d5e 337 SUPERFAMILY SSF53850 27 333 1.47E-80 T 14-10-2018 C3Y93_08335 2be7f7c8586a89390cb881600cef4d5e 337 Pfam PF13531 Bacterial extracellular solute-binding protein 51 286 4.2E-39 T 14-10-2018 C3Y93_08335 2be7f7c8586a89390cb881600cef4d5e 337 Gene3D G3DSA:3.40.190.10 33 301 1.7E-127 T 14-10-2018 C3Y93_08335 2be7f7c8586a89390cb881600cef4d5e 337 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 19 332 1.3E-136 T 14-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 C3Y93_08335 2be7f7c8586a89390cb881600cef4d5e 337 Gene3D G3DSA:3.40.190.10 120 331 1.7E-127 T 14-10-2018 C3Y93_08185 ea9fe346daf408785e227cda36aac05b 80 SUPERFAMILY SSF47598 3 45 2.67E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C3Y93_08185 ea9fe346daf408785e227cda36aac05b 80 Gene3D G3DSA:1.10.8.1250 10 80 2.5E-21 T 14-10-2018 IPR038296 Antitoxin ParD superfamily C3Y93_08185 ea9fe346daf408785e227cda36aac05b 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 64 2.3E-22 T 14-10-2018 IPR022789 Antitoxin ParD C3Y93_08185 ea9fe346daf408785e227cda36aac05b 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 71 2.1E-28 T 14-10-2018 IPR022789 Antitoxin ParD C3Y93_06780 162ef202f91f7136675053045e6ce0aa 253 Gene3D G3DSA:1.10.287.1080 124 252 1.9E-35 T 14-10-2018 C3Y93_06780 162ef202f91f7136675053045e6ce0aa 253 SUPERFAMILY SSF101386 2 95 1.96E-24 T 14-10-2018 C3Y93_06780 162ef202f91f7136675053045e6ce0aa 253 TIGRFAM TIGR00444 mazG: MazG family protein 7 249 1.1E-77 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG C3Y93_06780 162ef202f91f7136675053045e6ce0aa 253 SUPERFAMILY SSF101386 134 226 1.51E-18 T 14-10-2018 C3Y93_06780 162ef202f91f7136675053045e6ce0aa 253 Gene3D G3DSA:1.10.287.1080 1 120 6.3E-43 T 14-10-2018 C3Y93_06780 162ef202f91f7136675053045e6ce0aa 253 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 21 94 4.8E-26 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core C3Y93_06780 162ef202f91f7136675053045e6ce0aa 253 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 162 218 2.4E-8 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core C3Y93_01145 daa1313884966b38af48dd7a65f2c7e9 1794 Pfam PF13087 AAA domain 1352 1533 5.9E-13 T 14-10-2018 C3Y93_01145 daa1313884966b38af48dd7a65f2c7e9 1794 Pfam PF13195 Protein of unknown function (DUF4011) 19 221 4.9E-39 T 14-10-2018 IPR025103 Protein of unknown function DUF4011 C3Y93_01145 daa1313884966b38af48dd7a65f2c7e9 1794 Gene3D G3DSA:3.40.50.300 1360 1567 1.5E-27 T 14-10-2018 C3Y93_01145 daa1313884966b38af48dd7a65f2c7e9 1794 Pfam PF04480 Protein of unknown function (DUF559) 1590 1675 2.5E-4 T 14-10-2018 IPR007569 Protein of unknown function DUF559 C3Y93_01145 daa1313884966b38af48dd7a65f2c7e9 1794 SUPERFAMILY SSF54534 1724 1791 1.27E-5 T 14-10-2018 C3Y93_01145 daa1313884966b38af48dd7a65f2c7e9 1794 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 1750 1791 4.8E-7 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 C3Y93_01145 daa1313884966b38af48dd7a65f2c7e9 1794 SUPERFAMILY SSF52540 330 1560 1.24E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01145 daa1313884966b38af48dd7a65f2c7e9 1794 SUPERFAMILY SSF52980 1573 1675 6.43E-16 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C3Y93_01145 daa1313884966b38af48dd7a65f2c7e9 1794 Pfam PF13086 AAA domain 1276 1316 2.0E-7 T 14-10-2018 C3Y93_01145 daa1313884966b38af48dd7a65f2c7e9 1794 Gene3D G3DSA:3.10.50.30 1715 1792 2.6E-6 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 C3Y93_01145 daa1313884966b38af48dd7a65f2c7e9 1794 Gene3D G3DSA:3.40.960.10 1574 1678 7.4E-18 T 14-10-2018 C3Y93_01145 daa1313884966b38af48dd7a65f2c7e9 1794 SMART SM00952 1621 1674 1.4E-6 T 14-10-2018 IPR013584 RAP domain C3Y93_01145 daa1313884966b38af48dd7a65f2c7e9 1794 Gene3D G3DSA:3.40.50.300 1126 1353 3.8E-15 T 14-10-2018 C3Y93_01145 daa1313884966b38af48dd7a65f2c7e9 1794 Gene3D G3DSA:3.40.50.300 272 501 5.0E-19 T 14-10-2018 C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 SUPERFAMILY SSF53223 2 121 5.85E-38 T 14-10-2018 C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 SUPERFAMILY SSF51735 126 278 8.0E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 281 35.065 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 127 280 1.0E-60 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 9.1E-39 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 Gene3D G3DSA:3.40.50.720 5 257 1.1E-101 T 14-10-2018 C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 258 266 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 2.0E-63 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 2.0E-63 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 2.0E-63 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 2.0E-63 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 2.0E-63 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 2.0E-63 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 2.0E-63 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C3Y93_13430 164dbc0cc3172d24c8f2a89172c8cb52 282 Gene3D G3DSA:3.40.50.10860 7 275 1.1E-101 T 14-10-2018 C3Y93_00105 3f27352d6980d47b22ebc64b2a53d73a 105 SUPERFAMILY SSF102705 2 101 3.53E-24 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily C3Y93_00105 3f27352d6980d47b22ebc64b2a53d73a 105 Gene3D G3DSA:3.30.70.120 1 103 7.1E-41 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal C3Y93_12605 0c62ecb05b4436d1366c101946038307 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 3.5E-131 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3Y93_12605 0c62ecb05b4436d1366c101946038307 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 C3Y93_12605 0c62ecb05b4436d1366c101946038307 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 C3Y93_12605 0c62ecb05b4436d1366c101946038307 391 Gene3D G3DSA:3.40.47.10 126 388 1.5E-143 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_12605 0c62ecb05b4436d1366c101946038307 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 5.5E-87 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 C3Y93_12605 0c62ecb05b4436d1366c101946038307 391 SUPERFAMILY SSF53901 269 390 2.23E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_12605 0c62ecb05b4436d1366c101946038307 391 SUPERFAMILY SSF53901 3 268 2.4E-78 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_12605 0c62ecb05b4436d1366c101946038307 391 PIRSF PIRSF000429 1 391 1.4E-113 T 14-10-2018 IPR002155 Thiolase GO:0016747 C3Y93_12605 0c62ecb05b4436d1366c101946038307 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 1.1E-45 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 C3Y93_12605 0c62ecb05b4436d1366c101946038307 391 Gene3D G3DSA:3.40.47.10 6 274 1.5E-143 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C3Y93_07620 c14e6f05fc33f4b7c8ce3eeff99c265f 297 SUPERFAMILY SSF103481 48 147 2.35E-14 T 14-10-2018 C3Y93_07620 c14e6f05fc33f4b7c8ce3eeff99c265f 297 SUPERFAMILY SSF103481 187 282 1.96E-14 T 14-10-2018 C3Y93_07620 c14e6f05fc33f4b7c8ce3eeff99c265f 297 Pfam PF00892 EamA-like transporter family 158 281 1.6E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_07620 c14e6f05fc33f4b7c8ce3eeff99c265f 297 Pfam PF00892 EamA-like transporter family 13 143 1.8E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_10810 b061b3e4c16ca8ac5542667d38b1a6bc 112 SUPERFAMILY SSF54913 1 112 5.08E-46 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta C3Y93_10810 b061b3e4c16ca8ac5542667d38b1a6bc 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 C3Y93_10810 b061b3e4c16ca8ac5542667d38b1a6bc 112 PRINTS PR00340 P-II protein signature 83 103 2.0E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3Y93_10810 b061b3e4c16ca8ac5542667d38b1a6bc 112 PRINTS PR00340 P-II protein signature 23 41 2.0E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3Y93_10810 b061b3e4c16ca8ac5542667d38b1a6bc 112 PRINTS PR00340 P-II protein signature 52 75 2.0E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3Y93_10810 b061b3e4c16ca8ac5542667d38b1a6bc 112 PRINTS PR00340 P-II protein signature 2 17 2.0E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3Y93_10810 b061b3e4c16ca8ac5542667d38b1a6bc 112 PIRSF PIRSF039144 1 112 2.5E-55 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3Y93_10810 b061b3e4c16ca8ac5542667d38b1a6bc 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 C3Y93_10810 b061b3e4c16ca8ac5542667d38b1a6bc 112 SMART SM00938 4 105 8.4E-67 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3Y93_10810 b061b3e4c16ca8ac5542667d38b1a6bc 112 Gene3D G3DSA:3.30.70.120 1 112 1.0E-46 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal C3Y93_10810 b061b3e4c16ca8ac5542667d38b1a6bc 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.8E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C3Y93_08795 e793fd49ead9831332dc01548cd82ba1 35 Pfam PF13817 IS66 C-terminal element 1 28 4.4E-11 T 14-10-2018 IPR039552 Transposase IS66, C-terminal C3Y93_05960 76c2c699e802f735066b6527e7da25d7 540 SUPERFAMILY SSF161098 8 268 3.53E-41 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_05960 76c2c699e802f735066b6527e7da25d7 540 Gene3D G3DSA:1.10.3720.10 5 268 3.3E-50 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_05960 76c2c699e802f735066b6527e7da25d7 540 SUPERFAMILY SSF161098 286 535 1.96E-36 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_05960 76c2c699e802f735066b6527e7da25d7 540 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 258 5.7E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3Y93_05960 76c2c699e802f735066b6527e7da25d7 540 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 345 532 2.4E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3Y93_05960 76c2c699e802f735066b6527e7da25d7 540 Gene3D G3DSA:1.10.3720.10 282 539 2.9E-35 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_12945 dbd6f48887ac88b3e64c522dc0c123c6 225 Pfam PF04239 Protein of unknown function (DUF421) 101 162 5.0E-11 T 14-10-2018 IPR007353 Protein of unknown function DUF421 C3Y93_12945 dbd6f48887ac88b3e64c522dc0c123c6 225 Gene3D G3DSA:3.30.240.20 92 163 1.4E-13 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily C3Y93_12945 dbd6f48887ac88b3e64c522dc0c123c6 225 SUPERFAMILY SSF57802 184 214 7.06E-5 T 14-10-2018 C3Y93_00055 5d52f74463a3a9ea2e495222c93b25ab 189 Pfam PF00691 OmpA family 81 175 7.2E-20 T 14-10-2018 IPR006665 OmpA-like domain C3Y93_00055 5d52f74463a3a9ea2e495222c93b25ab 189 Gene3D G3DSA:3.30.1330.60 69 182 2.9E-40 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3Y93_00055 5d52f74463a3a9ea2e495222c93b25ab 189 PRINTS PR01021 OMPA domain signature 111 126 1.2E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_00055 5d52f74463a3a9ea2e495222c93b25ab 189 PRINTS PR01021 OMPA domain signature 81 103 1.2E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_00055 5d52f74463a3a9ea2e495222c93b25ab 189 PRINTS PR01021 OMPA domain signature 126 142 1.2E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_00055 5d52f74463a3a9ea2e495222c93b25ab 189 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 79 181 8.3E-43 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 C3Y93_00055 5d52f74463a3a9ea2e495222c93b25ab 189 SUPERFAMILY SSF103088 68 179 1.07E-34 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3Y93_00055 5d52f74463a3a9ea2e495222c93b25ab 189 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 2 181 28.984 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 C3Y93_00055 5d52f74463a3a9ea2e495222c93b25ab 189 ProSitePatterns PS01068 OmpA-like domain. 113 157 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 C3Y93_02390 8b6d900ff7a0231c62d6cbd3b7b1248f 735 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 551 4.9E-98 T 14-10-2018 IPR003776 YcaO-like domain C3Y93_02390 8b6d900ff7a0231c62d6cbd3b7b1248f 735 Pfam PF02566 OsmC-like protein 32 126 4.2E-10 T 14-10-2018 IPR003718 OsmC/Ohr family C3Y93_02390 8b6d900ff7a0231c62d6cbd3b7b1248f 735 SUPERFAMILY SSF82784 1 127 2.09E-20 T 14-10-2018 IPR036102 OsmC/Ohr superfamily C3Y93_02390 8b6d900ff7a0231c62d6cbd3b7b1248f 735 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 540 5.6E-71 T 14-10-2018 IPR003776 YcaO-like domain C3Y93_02390 8b6d900ff7a0231c62d6cbd3b7b1248f 735 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 728 0.0 T 14-10-2018 IPR019938 YcaO domain protein C3Y93_02390 8b6d900ff7a0231c62d6cbd3b7b1248f 735 Gene3D G3DSA:3.30.300.20 3 129 1.6E-15 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3Y93_06575 52fd6a4c51f8c5926815345fa53b9c37 274 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site C3Y93_06575 52fd6a4c51f8c5926815345fa53b9c37 274 Gene3D G3DSA:3.60.110.10 1 274 2.6E-81 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C3Y93_06575 52fd6a4c51f8c5926815345fa53b9c37 274 Pfam PF00795 Carbon-nitrogen hydrolase 4 260 3.2E-46 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 C3Y93_06575 52fd6a4c51f8c5926815345fa53b9c37 274 SUPERFAMILY SSF56317 4 269 8.5E-68 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C3Y93_10015 ef836ccb7a60e75de0d4ef40d12ac194 432 Pfam PF00860 Permease family 30 402 2.9E-93 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 C3Y93_10015 ef836ccb7a60e75de0d4ef40d12ac194 432 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 27 423 4.8E-105 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 C3Y93_07240 b1b2cd7697d7443665affd4706e8db07 291 SUPERFAMILY SSF53098 3 221 9.38E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_07240 b1b2cd7697d7443665affd4706e8db07 291 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 46 252 9.2E-72 T 14-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like C3Y93_07240 b1b2cd7697d7443665affd4706e8db07 291 Gene3D G3DSA:3.30.420.10 5 213 8.8E-21 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_00495 e65bb4e395da73678c0e4cf7f25f4ba9 74 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 3.8E-33 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_00495 e65bb4e395da73678c0e4cf7f25f4ba9 74 PRINTS PR01249 Ribosomal protein L31 signature 32 47 4.5E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_00495 e65bb4e395da73678c0e4cf7f25f4ba9 74 PRINTS PR01249 Ribosomal protein L31 signature 47 65 4.5E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_00495 e65bb4e395da73678c0e4cf7f25f4ba9 74 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.5E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_00495 e65bb4e395da73678c0e4cf7f25f4ba9 74 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_00495 e65bb4e395da73678c0e4cf7f25f4ba9 74 SUPERFAMILY SSF143800 1 67 5.49E-26 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_00495 e65bb4e395da73678c0e4cf7f25f4ba9 74 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 30.431 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_00495 e65bb4e395da73678c0e4cf7f25f4ba9 74 Gene3D G3DSA:2.30.170.50 1 70 3.7E-31 T 14-10-2018 C3Y93_00495 e65bb4e395da73678c0e4cf7f25f4ba9 74 Pfam PF01197 Ribosomal protein L31 1 66 6.7E-30 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_13600 a0579e6858f3693c814b1b86b958a767 271 Gene3D G3DSA:1.20.1540.10 11 228 2.2E-33 T 14-10-2018 IPR035952 Rhomboid-like superfamily C3Y93_13600 a0579e6858f3693c814b1b86b958a767 271 Pfam PF01694 Rhomboid family 65 218 1.4E-33 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 C3Y93_13600 a0579e6858f3693c814b1b86b958a767 271 SUPERFAMILY SSF144091 16 222 1.31E-37 T 14-10-2018 C3Y93_11045 e15498159f1cbca60137252a5897292e 246 Pfam PF01203 Type II secretion system (T2SS), protein N 41 198 1.7E-13 T 14-10-2018 IPR022792 Type II secretion system, protein N C3Y93_05545 74c89a438322b0e6b3d6b245605acb31 603 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 431 602 9.0E-40 T 14-10-2018 IPR000160 GGDEF domain C3Y93_05545 74c89a438322b0e6b3d6b245605acb31 603 Gene3D G3DSA:3.30.70.270 421 602 1.5E-47 T 14-10-2018 C3Y93_05545 74c89a438322b0e6b3d6b245605acb31 603 SUPERFAMILY SSF55073 440 601 1.41E-39 T 14-10-2018 IPR029787 Nucleotide cyclase C3Y93_05545 74c89a438322b0e6b3d6b245605acb31 603 SMART SM00267 424 602 4.7E-52 T 14-10-2018 IPR000160 GGDEF domain C3Y93_05545 74c89a438322b0e6b3d6b245605acb31 603 Pfam PF00990 Diguanylate cyclase, GGDEF domain 436 598 2.3E-41 T 14-10-2018 IPR000160 GGDEF domain C3Y93_01415 e9f4d78d725f79ee71c44cb6cd4a7571 204 Pfam PF01914 MarC family integral membrane protein 4 200 3.1E-17 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 C3Y93_06180 7662fff118dfc0351f9f8eb8a9f16887 229 PIRSF PIRSF004848 1 229 2.2E-75 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 C3Y93_06180 7662fff118dfc0351f9f8eb8a9f16887 229 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 223 30.857 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 C3Y93_06180 7662fff118dfc0351f9f8eb8a9f16887 229 SUPERFAMILY SSF51419 8 222 1.44E-74 T 14-10-2018 IPR029066 PLP-binding barrel C3Y93_06180 7662fff118dfc0351f9f8eb8a9f16887 229 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 224 7.1E-75 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 C3Y93_06180 7662fff118dfc0351f9f8eb8a9f16887 229 Pfam PF01168 Alanine racemase, N-terminal domain 14 224 2.9E-27 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_06180 7662fff118dfc0351f9f8eb8a9f16887 229 Gene3D G3DSA:3.20.20.10 2 229 1.3E-81 T 14-10-2018 IPR029066 PLP-binding barrel C3Y93_06180 7662fff118dfc0351f9f8eb8a9f16887 229 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 C3Y93_07605 de48da077ac8018e15f3d7c939913e73 679 Gene3D G3DSA:1.10.1370.40 12 669 1.1E-241 T 14-10-2018 C3Y93_07605 de48da077ac8018e15f3d7c939913e73 679 Pfam PF01432 Peptidase family M3 221 670 1.1E-141 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 C3Y93_07605 de48da077ac8018e15f3d7c939913e73 679 SUPERFAMILY SSF55486 9 671 4.56E-181 T 14-10-2018 C3Y93_07605 de48da077ac8018e15f3d7c939913e73 679 Gene3D G3DSA:1.10.1370.10 140 604 1.1E-241 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 C3Y93_12710 fc78c1a42e6eda2fa01fd802872142ca 316 SUPERFAMILY SSF48371 94 273 9.05E-6 T 14-10-2018 IPR016024 Armadillo-type fold C3Y93_12710 fc78c1a42e6eda2fa01fd802872142ca 316 Pfam PF13250 Domain of unknown function (DUF4041) 231 286 7.0E-5 T 14-10-2018 IPR025280 Domain of unknown function DUF4041 C3Y93_12725 f47c0daeb08616126ba95012599b53b3 113 Pfam PF03831 PhnA domain 43 113 1.6E-33 T 14-10-2018 IPR013988 PhnA protein, C-terminal C3Y93_12725 f47c0daeb08616126ba95012599b53b3 113 Pfam PF08274 PhnA Zinc-Ribbon 2 30 5.9E-17 T 14-10-2018 IPR013987 PhnA protein, N-terminal C3Y93_12725 f47c0daeb08616126ba95012599b53b3 113 SUPERFAMILY SSF57783 1 35 1.41E-14 T 14-10-2018 C3Y93_12725 f47c0daeb08616126ba95012599b53b3 113 SUPERFAMILY SSF82057 38 113 4.58E-27 T 14-10-2018 C3Y93_12725 f47c0daeb08616126ba95012599b53b3 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 113 6.5E-46 T 14-10-2018 IPR004624 PhnA protein C3Y93_12725 f47c0daeb08616126ba95012599b53b3 113 Gene3D G3DSA:2.20.25.10 1 40 1.2E-19 T 14-10-2018 C3Y93_12725 f47c0daeb08616126ba95012599b53b3 113 Gene3D G3DSA:2.30.30.40 41 113 5.2E-33 T 14-10-2018 C3Y93_03835 81d030434045c740b5674014190199b4 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.513 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_03835 81d030434045c740b5674014190199b4 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 2.5E-26 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal C3Y93_03835 81d030434045c740b5674014190199b4 148 SUPERFAMILY SSF55658 1 57 8.2E-18 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal C3Y93_03835 81d030434045c740b5674014190199b4 148 SUPERFAMILY SSF55653 60 148 1.96E-26 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily C3Y93_03835 81d030434045c740b5674014190199b4 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 2 148 2.9E-48 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_03835 81d030434045c740b5674014190199b4 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 2 46 1.9E-20 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03835 81d030434045c740b5674014190199b4 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_03835 81d030434045c740b5674014190199b4 148 Gene3D G3DSA:3.10.430.100 61 148 3.1E-29 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily C3Y93_03835 81d030434045c740b5674014190199b4 148 Gene3D G3DSA:3.40.5.10 1 50 1.9E-21 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_11060 c2ab45e71df8bc4c4d4ce4b63d5d410f 216 Pfam PF00498 FHA domain 24 86 6.0E-19 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 C3Y93_11060 c2ab45e71df8bc4c4d4ce4b63d5d410f 216 SMART SM00240 22 72 1.1E-13 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 C3Y93_11060 c2ab45e71df8bc4c4d4ce4b63d5d410f 216 Gene3D G3DSA:2.60.200.20 2 105 7.4E-24 T 14-10-2018 C3Y93_11060 c2ab45e71df8bc4c4d4ce4b63d5d410f 216 SUPERFAMILY SSF49879 3 96 7.27E-24 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 C3Y93_12805 0051e848a1b670e24d3ae633691d0baf 427 Pfam PF00202 Aminotransferase class-III 22 418 2.1E-129 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3Y93_12805 0051e848a1b670e24d3ae633691d0baf 427 Gene3D G3DSA:3.90.1150.10 7 412 4.0E-166 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_12805 0051e848a1b670e24d3ae633691d0baf 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 240 277 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3Y93_12805 0051e848a1b670e24d3ae633691d0baf 427 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 419 4.2E-183 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 C3Y93_12805 0051e848a1b670e24d3ae633691d0baf 427 PIRSF PIRSF000521 16 150 2.2E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3Y93_12805 0051e848a1b670e24d3ae633691d0baf 427 PIRSF PIRSF000521 175 422 1.1E-23 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C3Y93_12805 0051e848a1b670e24d3ae633691d0baf 427 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 422 48.525 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 C3Y93_12805 0051e848a1b670e24d3ae633691d0baf 427 Gene3D G3DSA:3.40.640.10 58 328 4.0E-166 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_12805 0051e848a1b670e24d3ae633691d0baf 427 SUPERFAMILY SSF53383 4 420 4.72E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_05380 64ad80c603c267e0d64782736a341ea6 183 Pfam PF00652 Ricin-type beta-trefoil lectin domain 68 178 7.4E-20 T 14-10-2018 IPR000772 Ricin B, lectin domain C3Y93_05380 64ad80c603c267e0d64782736a341ea6 183 SMART SM00458 64 181 1.3E-21 T 14-10-2018 IPR000772 Ricin B, lectin domain C3Y93_05380 64ad80c603c267e0d64782736a341ea6 183 Gene3D G3DSA:2.80.10.50 58 181 1.9E-27 T 14-10-2018 C3Y93_05380 64ad80c603c267e0d64782736a341ea6 183 SUPERFAMILY SSF50370 71 180 1.53E-27 T 14-10-2018 IPR035992 Ricin B-like lectins C3Y93_00830 6ea36922cc5ad2b76246ceb5df690ee8 379 Pfam PF05134 Type II secretion system (T2SS), protein L 32 203 3.6E-14 T 14-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain C3Y93_00830 6ea36922cc5ad2b76246ceb5df690ee8 379 Gene3D G3DSA:3.30.420.380 25 220 1.5E-15 T 14-10-2018 C3Y93_00830 6ea36922cc5ad2b76246ceb5df690ee8 379 PIRSF PIRSF015761 9 379 4.0E-17 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 C3Y93_00830 6ea36922cc5ad2b76246ceb5df690ee8 379 Gene3D G3DSA:3.30.420.370 132 204 1.5E-15 T 14-10-2018 C3Y93_00830 6ea36922cc5ad2b76246ceb5df690ee8 379 Pfam PF12693 GspL periplasmic domain 232 367 2.0E-10 T 14-10-2018 IPR025691 GspL periplasmic domain C3Y93_00830 6ea36922cc5ad2b76246ceb5df690ee8 379 SUPERFAMILY SSF53067 2 134 1.42E-15 T 14-10-2018 C3Y93_00830 6ea36922cc5ad2b76246ceb5df690ee8 379 Gene3D G3DSA:3.30.1360.100 298 379 1.9E-7 T 14-10-2018 C3Y93_10335 c3ce927ae4375a08ddb141c48eea0119 130 Pfam PF04247 Invasion gene expression up-regulator, SirB 6 127 3.1E-12 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB C3Y93_10335 c3ce927ae4375a08ddb141c48eea0119 130 PIRSF PIRSF005610 1 126 5.2E-8 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB C3Y93_06700 1657f835373776d28fb26d4f81518706 205 SUPERFAMILY SSF47616 77 202 1.16E-35 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C3Y93_06700 1657f835373776d28fb26d4f81518706 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 6 80 1.2E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C3Y93_06700 1657f835373776d28fb26d4f81518706 205 Gene3D G3DSA:3.40.30.10 2 203 6.2E-85 T 14-10-2018 C3Y93_06700 1657f835373776d28fb26d4f81518706 205 SUPERFAMILY SSF52833 1 83 5.5E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_06700 1657f835373776d28fb26d4f81518706 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 135 195 3.6E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal C3Y93_06700 1657f835373776d28fb26d4f81518706 205 Gene3D G3DSA:1.20.1050.10 87 194 6.2E-85 T 14-10-2018 C3Y93_08700 87d175e7ab4dec64657740a02dabeed9 328 Pfam PF12833 Helix-turn-helix domain 246 324 2.3E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_08700 87d175e7ab4dec64657740a02dabeed9 328 Gene3D G3DSA:1.10.10.60 224 327 5.4E-26 T 14-10-2018 C3Y93_08700 87d175e7ab4dec64657740a02dabeed9 328 Pfam PF14525 AraC-binding-like domain 26 170 2.7E-15 T 14-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like C3Y93_08700 87d175e7ab4dec64657740a02dabeed9 328 SMART SM00342 238 323 1.7E-12 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C3Y93_03900 23cd2a39a1633c263e06568abe91421a 293 Pfam PF01758 Sodium Bile acid symporter family 11 194 4.3E-33 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 C3Y93_03900 23cd2a39a1633c263e06568abe91421a 293 Gene3D G3DSA:1.20.1530.20 3 284 7.1E-76 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily C3Y93_02645 174f8a09dcbaeaeff72dfb19f3cc7b64 304 Gene3D G3DSA:3.40.190.10 92 292 3.6E-77 T 14-10-2018 C3Y93_02645 174f8a09dcbaeaeff72dfb19f3cc7b64 304 SUPERFAMILY SSF53850 90 292 1.42E-33 T 14-10-2018 C3Y93_02645 174f8a09dcbaeaeff72dfb19f3cc7b64 304 Pfam PF03466 LysR substrate binding domain 90 288 1.9E-35 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_02645 174f8a09dcbaeaeff72dfb19f3cc7b64 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.9E-24 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_02645 174f8a09dcbaeaeff72dfb19f3cc7b64 304 Gene3D G3DSA:1.10.10.10 1 91 3.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_02645 174f8a09dcbaeaeff72dfb19f3cc7b64 304 SUPERFAMILY SSF46785 1 83 1.59E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_02645 174f8a09dcbaeaeff72dfb19f3cc7b64 304 Gene3D G3DSA:3.40.190.10 162 267 3.6E-77 T 14-10-2018 C3Y93_02645 174f8a09dcbaeaeff72dfb19f3cc7b64 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_02645 174f8a09dcbaeaeff72dfb19f3cc7b64 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_02645 174f8a09dcbaeaeff72dfb19f3cc7b64 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_00160 dee240f4487a5a08719d2cd7a749dfbe 307 Gene3D G3DSA:1.10.10.10 1 86 4.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_00160 dee240f4487a5a08719d2cd7a749dfbe 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_00160 dee240f4487a5a08719d2cd7a749dfbe 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_00160 dee240f4487a5a08719d2cd7a749dfbe 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_00160 dee240f4487a5a08719d2cd7a749dfbe 307 Gene3D G3DSA:3.40.190.10 91 300 2.0E-83 T 14-10-2018 C3Y93_00160 dee240f4487a5a08719d2cd7a749dfbe 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.4E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_00160 dee240f4487a5a08719d2cd7a749dfbe 307 SUPERFAMILY SSF53850 92 292 7.91E-39 T 14-10-2018 C3Y93_00160 dee240f4487a5a08719d2cd7a749dfbe 307 Pfam PF03466 LysR substrate binding domain 91 280 4.7E-38 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_00160 dee240f4487a5a08719d2cd7a749dfbe 307 Gene3D G3DSA:3.40.190.10 167 266 2.0E-83 T 14-10-2018 C3Y93_00160 dee240f4487a5a08719d2cd7a749dfbe 307 SUPERFAMILY SSF46785 2 112 4.25E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_00400 5b54110ee0f8b38ad1097200fd688772 206 Pfam PF09997 Predicted membrane protein (DUF2238) 41 190 1.4E-43 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 C3Y93_09525 2545370adc63ad4196c0219e97691a8d 150 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 5 150 37.443 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 C3Y93_09525 2545370adc63ad4196c0219e97691a8d 150 PIRSF PIRSF006173 1 150 1.6E-66 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 C3Y93_09525 2545370adc63ad4196c0219e97691a8d 150 Pfam PF03692 Putative zinc- or iron-chelating domain 27 95 4.2E-10 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein C3Y93_02510 27c397a9b1a9f8f01099af4fc86ffaa0 352 PIRSF PIRSF001361 2 350 1.6E-139 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 C3Y93_02510 27c397a9b1a9f8f01099af4fc86ffaa0 352 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 18 346 4.2E-128 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 C3Y93_02510 27c397a9b1a9f8f01099af4fc86ffaa0 352 Gene3D G3DSA:3.20.20.70 8 347 1.4E-137 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_02510 27c397a9b1a9f8f01099af4fc86ffaa0 352 SUPERFAMILY SSF51569 19 344 1.78E-112 T 14-10-2018 C3Y93_02510 27c397a9b1a9f8f01099af4fc86ffaa0 352 Pfam PF00793 DAHP synthetase I family 44 335 2.4E-80 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C3Y93_04640 b74328a69f2e09fe2f34d03e47770cb2 203 Pfam PF08747 Domain of unknown function (DUF1788) 66 187 1.3E-31 T 14-10-2018 IPR014858 Protein of unknown function DUF1788 C3Y93_08965 e02ee42329f5c6a795826be8bda959eb 294 Pfam PF11843 Protein of unknown function (DUF3363) 75 292 1.1E-87 T 14-10-2018 IPR021795 Protein of unknown function DUF3363 C3Y93_10925 c12f704fcc6da14692fda963d03f406f 86 SMART SM00899 1 82 5.3E-18 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 C3Y93_10925 c12f704fcc6da14692fda963d03f406f 86 Gene3D G3DSA:2.30.30.90 1 83 9.4E-24 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain C3Y93_10925 c12f704fcc6da14692fda963d03f406f 86 SUPERFAMILY SSF50037 4 81 8.24E-14 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal C3Y93_10925 c12f704fcc6da14692fda963d03f406f 86 Pfam PF04023 FeoA domain 1 81 1.2E-15 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 C3Y93_01780 10b3e03fc63a986bbd8dc35cca175b52 492 Gene3D G3DSA:3.50.50.60 295 490 2.0E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_01780 10b3e03fc63a986bbd8dc35cca175b52 492 SUPERFAMILY SSF51905 255 470 9.46E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_01780 10b3e03fc63a986bbd8dc35cca175b52 492 Pfam PF00743 Flavin-binding monooxygenase-like 9 213 8.8E-19 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 C3Y93_01780 10b3e03fc63a986bbd8dc35cca175b52 492 Gene3D G3DSA:3.50.50.60 1 173 4.1E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_01780 10b3e03fc63a986bbd8dc35cca175b52 492 SUPERFAMILY SSF51905 7 229 2.7E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_05890 41e5645e91b0806461b09e2783fe89cf 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 14 137 8.9E-48 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05890 41e5645e91b0806461b09e2783fe89cf 180 SUPERFAMILY SSF54862 40 160 2.22E-27 T 14-10-2018 C3Y93_05890 41e5645e91b0806461b09e2783fe89cf 180 Gene3D G3DSA:3.30.70.3270 31 174 2.5E-40 T 14-10-2018 C3Y93_05890 41e5645e91b0806461b09e2783fe89cf 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 5 163 27.57 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05890 41e5645e91b0806461b09e2783fe89cf 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3Y93_05890 41e5645e91b0806461b09e2783fe89cf 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 6.3E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3Y93_05890 41e5645e91b0806461b09e2783fe89cf 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3Y93_07075 d3c19a12681c821c84370c8ffcd699dc 312 Gene3D G3DSA:3.90.550.10 1 260 5.0E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_07075 d3c19a12681c821c84370c8ffcd699dc 312 SUPERFAMILY SSF53448 1 206 1.31E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_07075 d3c19a12681c821c84370c8ffcd699dc 312 Pfam PF00535 Glycosyl transferase family 2 3 120 6.4E-27 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C3Y93_03620 c7c19d67c9b1f8834c5a4893772f259a 391 TIGRFAM TIGR00843 benE: benzoate transporter 9 384 8.8E-108 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 C3Y93_03620 c7c19d67c9b1f8834c5a4893772f259a 391 Pfam PF03594 Benzoate membrane transport protein 7 382 8.3E-124 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 C3Y93_06020 3e9fd39bc3fff395e7defd314751a02e 492 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 16 479 4.9E-184 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C3Y93_06020 3e9fd39bc3fff395e7defd314751a02e 492 ProSitePatterns PS00571 Amidases signature. 152 183 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 C3Y93_06020 3e9fd39bc3fff395e7defd314751a02e 492 Gene3D G3DSA:3.90.1300.10 3 487 2.0E-201 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C3Y93_06020 3e9fd39bc3fff395e7defd314751a02e 492 Pfam PF01425 Amidase 25 468 1.3E-163 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C3Y93_06020 3e9fd39bc3fff395e7defd314751a02e 492 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 479 90.893 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C3Y93_06020 3e9fd39bc3fff395e7defd314751a02e 492 SUPERFAMILY SSF75304 3 484 4.45E-164 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C3Y93_04335 fb3cc5f33931439908c4d746042775f8 436 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 261 6.2E-62 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 C3Y93_04335 fb3cc5f33931439908c4d746042775f8 436 SUPERFAMILY SSF56601 2 278 8.75E-70 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C3Y93_04335 fb3cc5f33931439908c4d746042775f8 436 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 1.0E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3Y93_04335 fb3cc5f33931439908c4d746042775f8 436 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 1.0E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3Y93_04335 fb3cc5f33931439908c4d746042775f8 436 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 1.0E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 C3Y93_04335 fb3cc5f33931439908c4d746042775f8 436 Gene3D G3DSA:3.40.710.10 16 279 2.4E-80 T 14-10-2018 C3Y93_01265 1f7aca7117da31704f6a1ff0c5f4dc7a 655 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 496 1.1E-187 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 C3Y93_01265 1f7aca7117da31704f6a1ff0c5f4dc7a 655 ProSitePatterns PS01303 BCCT family of transporters signature. 316 325 - T 14-10-2018 IPR018093 BCCT transporter, conserved site C3Y93_01265 1f7aca7117da31704f6a1ff0c5f4dc7a 655 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 497 2.8E-160 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 C3Y93_12290 4e48e847a127ddc022701a5a2e255d76 302 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 6 281 4.0E-61 T 14-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 C3Y93_02170 4f71e7f3b51f645541f66eb32c15b0d6 290 SUPERFAMILY SSF48179 159 286 5.89E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C3Y93_02170 4f71e7f3b51f645541f66eb32c15b0d6 290 PIRSF PIRSF000103 1 288 1.9E-56 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 C3Y93_02170 4f71e7f3b51f645541f66eb32c15b0d6 290 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 C3Y93_02170 4f71e7f3b51f645541f66eb32c15b0d6 290 Gene3D G3DSA:3.40.50.720 1 161 8.3E-43 T 14-10-2018 C3Y93_02170 4f71e7f3b51f645541f66eb32c15b0d6 290 SUPERFAMILY SSF51735 4 158 2.86E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_02170 4f71e7f3b51f645541f66eb32c15b0d6 290 Gene3D G3DSA:1.10.1040.10 162 289 1.0E-29 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 C3Y93_02170 4f71e7f3b51f645541f66eb32c15b0d6 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 157 2.4E-40 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 C3Y93_02170 4f71e7f3b51f645541f66eb32c15b0d6 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 160 281 4.1E-36 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 C3Y93_14065 9f60796c6974ee1423e32f01a31957df 90 Gene3D G3DSA:1.10.260.40 2 90 5.6E-21 T 14-10-2018 C3Y93_14065 9f60796c6974ee1423e32f01a31957df 90 Pfam PF01381 Helix-turn-helix 37 75 1.1E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_14065 9f60796c6974ee1423e32f01a31957df 90 SUPERFAMILY SSF47413 37 80 1.26E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_14065 9f60796c6974ee1423e32f01a31957df 90 SMART SM00530 36 90 1.1E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_08555 b5c98652893ce949438b241eee0a249c 309 SUPERFAMILY SSF56042 140 291 3.89E-33 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3Y93_08555 b5c98652893ce949438b241eee0a249c 309 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 304 28.669 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 C3Y93_08555 b5c98652893ce949438b241eee0a249c 309 Gene3D G3DSA:3.30.1330.10 1 141 2.0E-48 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3Y93_08555 b5c98652893ce949438b241eee0a249c 309 SUPERFAMILY SSF55326 2 136 8.64E-38 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C3Y93_08555 b5c98652893ce949438b241eee0a249c 309 Gene3D G3DSA:3.90.650.10 142 305 6.2E-48 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C3Y93_08555 b5c98652893ce949438b241eee0a249c 309 Pfam PF00586 AIR synthase related protein, N-terminal domain 25 135 9.6E-28 T 14-10-2018 IPR016188 PurM-like, N-terminal domain C3Y93_08555 b5c98652893ce949438b241eee0a249c 309 PIRSF PIRSF005303 1 304 4.8E-95 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 C3Y93_08555 b5c98652893ce949438b241eee0a249c 309 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 304 1.6E-104 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 C3Y93_07835 728cf135b2a9bfb2819043dee5cfc2aa 413 Pfam PF00375 Sodium:dicarboxylate symporter family 3 403 5.7E-119 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 C3Y93_07835 728cf135b2a9bfb2819043dee5cfc2aa 413 PRINTS PR00173 Glutamate-aspartate symporter signature 47 67 5.0E-56 T 14-10-2018 C3Y93_07835 728cf135b2a9bfb2819043dee5cfc2aa 413 PRINTS PR00173 Glutamate-aspartate symporter signature 77 102 5.0E-56 T 14-10-2018 C3Y93_07835 728cf135b2a9bfb2819043dee5cfc2aa 413 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 5.0E-56 T 14-10-2018 C3Y93_07835 728cf135b2a9bfb2819043dee5cfc2aa 413 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 5.0E-56 T 14-10-2018 C3Y93_07835 728cf135b2a9bfb2819043dee5cfc2aa 413 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 5.0E-56 T 14-10-2018 C3Y93_07835 728cf135b2a9bfb2819043dee5cfc2aa 413 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 5.0E-56 T 14-10-2018 C3Y93_07835 728cf135b2a9bfb2819043dee5cfc2aa 413 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 5.0E-56 T 14-10-2018 C3Y93_07835 728cf135b2a9bfb2819043dee5cfc2aa 413 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 5.0E-56 T 14-10-2018 C3Y93_07835 728cf135b2a9bfb2819043dee5cfc2aa 413 PRINTS PR00173 Glutamate-aspartate symporter signature 229 248 5.0E-56 T 14-10-2018 C3Y93_07835 728cf135b2a9bfb2819043dee5cfc2aa 413 SUPERFAMILY SSF118215 3 403 2.48E-107 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 C3Y93_07835 728cf135b2a9bfb2819043dee5cfc2aa 413 Gene3D G3DSA:1.10.3860.10 1 410 8.4E-125 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 C3Y93_14135 08bacc34a8a19c4334b31169ea1aef1d 106 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 41 102 3.4E-12 T 14-10-2018 IPR009387 Toxin HigB-2 C3Y93_14135 08bacc34a8a19c4334b31169ea1aef1d 106 PIRSF PIRSF039032 1 105 5.8E-39 T 14-10-2018 IPR009387 Toxin HigB-2 C3Y93_01830 9c8bd2673ac36296a281708672b40e87 507 SMART SM01091 427 507 9.4E-13 T 14-10-2018 IPR005170 Transporter-associated domain C3Y93_01830 9c8bd2673ac36296a281708672b40e87 507 Pfam PF03741 Integral membrane protein TerC family 14 204 7.6E-48 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 C3Y93_01830 9c8bd2673ac36296a281708672b40e87 507 Pfam PF00571 CBS domain 365 414 0.0013 T 14-10-2018 IPR000644 CBS domain C3Y93_01830 9c8bd2673ac36296a281708672b40e87 507 Pfam PF03471 Transporter associated domain 428 506 1.9E-13 T 14-10-2018 IPR005170 Transporter-associated domain C3Y93_01830 9c8bd2673ac36296a281708672b40e87 507 SUPERFAMILY SSF54631 283 417 3.05E-20 T 14-10-2018 C3Y93_01830 9c8bd2673ac36296a281708672b40e87 507 Gene3D G3DSA:3.30.465.10 429 506 4.9E-11 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C3Y93_01830 9c8bd2673ac36296a281708672b40e87 507 SUPERFAMILY SSF56176 422 506 2.13E-12 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C3Y93_01830 9c8bd2673ac36296a281708672b40e87 507 Gene3D G3DSA:3.10.580.10 276 428 8.1E-40 T 14-10-2018 C3Y93_10755 d9ef5c7e63d4cab9f902c79233584a85 214 Pfam PF03458 UPF0126 domain 5 79 9.5E-20 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 C3Y93_10755 d9ef5c7e63d4cab9f902c79233584a85 214 Pfam PF03458 UPF0126 domain 91 163 4.0E-20 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 C3Y93_04320 7c9bb4728338ec2f52b429bf523f2af4 273 PIRSF PIRSF016184 1 273 3.3E-50 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 C3Y93_04320 7c9bb4728338ec2f52b429bf523f2af4 273 Gene3D G3DSA:3.10.310.10 117 261 8.7E-82 T 14-10-2018 C3Y93_04320 7c9bb4728338ec2f52b429bf523f2af4 273 Gene3D G3DSA:3.10.310.10 3 265 8.7E-82 T 14-10-2018 C3Y93_04320 7c9bb4728338ec2f52b429bf523f2af4 273 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 232 5.5E-39 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 C3Y93_04320 7c9bb4728338ec2f52b429bf523f2af4 273 Pfam PF02567 Phenazine biosynthesis-like protein 6 266 2.2E-54 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 C3Y93_04320 7c9bb4728338ec2f52b429bf523f2af4 273 SUPERFAMILY SSF54506 2 273 1.06E-70 T 14-10-2018 C3Y93_10785 3acddf44c27bb27c7b880922753a6e7d 178 Pfam PF00719 Inorganic pyrophosphatase 18 173 5.9E-52 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C3Y93_10785 3acddf44c27bb27c7b880922753a6e7d 178 SUPERFAMILY SSF50324 3 175 2.49E-67 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C3Y93_10785 3acddf44c27bb27c7b880922753a6e7d 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.6 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C3Y93_10785 3acddf44c27bb27c7b880922753a6e7d 178 Gene3D G3DSA:3.90.80.10 1 175 4.5E-71 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C3Y93_10785 3acddf44c27bb27c7b880922753a6e7d 178 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C3Y93_08430 ff3d59bc290c0bf66b3676ff7a4fce52 125 Pfam PF12568 Acetyltransferase (GNAT) domain 4 99 1.7E-10 T 14-10-2018 IPR000182 GNAT domain C3Y93_08430 ff3d59bc290c0bf66b3676ff7a4fce52 125 Gene3D G3DSA:3.40.630.30 1 112 1.7E-16 T 14-10-2018 C3Y93_08430 ff3d59bc290c0bf66b3676ff7a4fce52 125 SUPERFAMILY SSF55729 23 109 8.97E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3Y93_08520 812360b1a3d7b4250a9819de481dbb4b 626 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 6 626 33.281 T 14-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup C3Y93_08520 812360b1a3d7b4250a9819de481dbb4b 626 Pfam PF02705 K+ potassium transporter 15 547 5.0E-200 T 14-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 C3Y93_06890 5c6d62b9920dc926281af41a3cf9fa5c 173 Pfam PF07566 Domain of Unknown Function (DUF1543) 16 60 9.4E-20 T 14-10-2018 IPR011440 Domain of unknown function DUF1543 C3Y93_06890 5c6d62b9920dc926281af41a3cf9fa5c 173 Gene3D G3DSA:3.50.100.10 68 158 4.6E-23 T 14-10-2018 C3Y93_06890 5c6d62b9920dc926281af41a3cf9fa5c 173 Gene3D G3DSA:3.10.20.10 1 67 1.8E-23 T 14-10-2018 C3Y93_13955 7f43ce6599c39eb558c5e71f4c270c78 376 Gene3D G3DSA:2.40.50.100 91 288 1.3E-28 T 14-10-2018 C3Y93_13955 7f43ce6599c39eb558c5e71f4c270c78 376 Pfam PF13533 Biotin-lipoyl like 91 140 6.0E-15 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain C3Y93_13955 7f43ce6599c39eb558c5e71f4c270c78 376 Gene3D G3DSA:2.40.30.170 83 366 1.3E-28 T 14-10-2018 C3Y93_13955 7f43ce6599c39eb558c5e71f4c270c78 376 Gene3D G3DSA:1.10.287.470 125 254 1.3E-28 T 14-10-2018 C3Y93_13955 7f43ce6599c39eb558c5e71f4c270c78 376 SUPERFAMILY SSF111369 82 145 1.2E-8 T 14-10-2018 C3Y93_13955 7f43ce6599c39eb558c5e71f4c270c78 376 SUPERFAMILY SSF111369 214 323 5.23E-6 T 14-10-2018 C3Y93_11620 836d59407d6adcb21a692a3eb07c2753 214 Gene3D G3DSA:3.60.15.10 2 211 4.5E-74 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_11620 836d59407d6adcb21a692a3eb07c2753 214 Pfam PF00753 Metallo-beta-lactamase superfamily 10 193 7.7E-30 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_11620 836d59407d6adcb21a692a3eb07c2753 214 SMART SM00849 13 193 3.8E-40 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_11620 836d59407d6adcb21a692a3eb07c2753 214 SUPERFAMILY SSF56281 3 209 1.97E-54 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_09280 c5eefe8726b807906189780ccfa711ea 145 Gene3D G3DSA:2.40.128.520 23 145 3.3E-16 T 14-10-2018 C3Y93_09280 c5eefe8726b807906189780ccfa711ea 145 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 27 143 1.3E-24 T 14-10-2018 IPR019223 Domain of unknown function DUF2147 C3Y93_08735 db32ff8dafe00cd617fd21b9cb5b320c 120 SUPERFAMILY SSF46689 2 89 2.69E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_08735 db32ff8dafe00cd617fd21b9cb5b320c 120 Pfam PF13936 Helix-turn-helix domain 3 45 3.8E-17 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain C3Y93_12365 1db9f56920fdfd1108bc55850d92c56b 213 Pfam PF00578 AhpC/TSA family 6 135 4.8E-29 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3Y93_12365 1db9f56920fdfd1108bc55850d92c56b 213 Gene3D G3DSA:3.30.1020.10 146 210 2.2E-26 T 14-10-2018 C3Y93_12365 1db9f56920fdfd1108bc55850d92c56b 213 PIRSF PIRSF000239 1 209 1.3E-75 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3Y93_12365 1db9f56920fdfd1108bc55850d92c56b 213 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 196 1.2E-10 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C3Y93_12365 1db9f56920fdfd1108bc55850d92c56b 213 Gene3D G3DSA:3.40.30.10 1 145 3.4E-47 T 14-10-2018 C3Y93_12365 1db9f56920fdfd1108bc55850d92c56b 213 SUPERFAMILY SSF52833 3 209 2.0E-64 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_03910 c7a2b977235634a7999073b3cb83a359 284 Pfam PF13717 zinc-ribbon domain 6 39 1.8E-7 T 14-10-2018 IPR011723 Zinc finger/thioredoxin putative C3Y93_03910 c7a2b977235634a7999073b3cb83a359 284 Pfam PF11906 Protein of unknown function (DUF3426) 141 280 4.4E-13 T 14-10-2018 IPR021834 Protein of unknown function DUF3426 C3Y93_03910 c7a2b977235634a7999073b3cb83a359 284 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 40 1.2E-10 T 14-10-2018 IPR011723 Zinc finger/thioredoxin putative C3Y93_07940 6aa417a578642d18399f3eb73b9602f4 262 SUPERFAMILY SSF53223 3 101 8.63E-30 T 14-10-2018 C3Y93_07940 6aa417a578642d18399f3eb73b9602f4 262 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 260 28.962 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 C3Y93_07940 6aa417a578642d18399f3eb73b9602f4 262 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 259 5.1E-72 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 C3Y93_07940 6aa417a578642d18399f3eb73b9602f4 262 Gene3D G3DSA:3.40.50.720 115 234 5.0E-75 T 14-10-2018 C3Y93_07940 6aa417a578642d18399f3eb73b9602f4 262 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 194 3.1E-12 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase C3Y93_07940 6aa417a578642d18399f3eb73b9602f4 262 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 1.5E-21 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 C3Y93_07940 6aa417a578642d18399f3eb73b9602f4 262 SUPERFAMILY SSF51735 102 259 6.83E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_07940 6aa417a578642d18399f3eb73b9602f4 262 Gene3D G3DSA:3.40.50.10860 5 253 5.0E-75 T 14-10-2018 C3Y93_05600 ac3f908bc53bd9fb6c719352d3c347ad 724 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 708 6.1E-228 T 14-10-2018 IPR010020 Integral membrane protein, YccS/YhfK C3Y93_05600 ac3f908bc53bd9fb6c719352d3c347ad 724 Pfam PF12805 FUSC-like inner membrane protein yccS 70 349 2.5E-89 T 14-10-2018 IPR032692 Integral membrane protein YccS, N-terminal C3Y93_05600 ac3f908bc53bd9fb6c719352d3c347ad 724 Pfam PF13515 Fusaric acid resistance protein-like 411 530 1.9E-19 T 14-10-2018 C3Y93_05600 ac3f908bc53bd9fb6c719352d3c347ad 724 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 12 708 1.1E-246 T 14-10-2018 IPR010019 Integral membrane protein, YccS C3Y93_02935 7cf549aeb88f2b35f0eb610f56a2373d 520 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 356 508 2.3E-30 T 14-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit C3Y93_02935 7cf549aeb88f2b35f0eb610f56a2373d 520 Pfam PF17289 Terminase RNaseH-like domain 344 506 1.5E-10 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like C3Y93_02935 7cf549aeb88f2b35f0eb610f56a2373d 520 SUPERFAMILY SSF52540 49 131 8.17E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_02935 7cf549aeb88f2b35f0eb610f56a2373d 520 Gene3D G3DSA:3.40.50.300 45 146 2.0E-5 T 14-10-2018 C3Y93_05515 79b5f29fcea643289968bf15e4d9e72e 329 SUPERFAMILY SSF46785 2 83 4.69E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_05515 79b5f29fcea643289968bf15e4d9e72e 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.9E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_05515 79b5f29fcea643289968bf15e4d9e72e 329 SUPERFAMILY SSF53850 90 305 3.98E-36 T 14-10-2018 C3Y93_05515 79b5f29fcea643289968bf15e4d9e72e 329 Gene3D G3DSA:3.40.190.10 92 303 3.0E-60 T 14-10-2018 C3Y93_05515 79b5f29fcea643289968bf15e4d9e72e 329 Gene3D G3DSA:3.40.190.10 170 279 3.0E-60 T 14-10-2018 C3Y93_05515 79b5f29fcea643289968bf15e4d9e72e 329 Pfam PF03466 LysR substrate binding domain 97 305 1.5E-15 T 14-10-2018 IPR005119 LysR, substrate-binding C3Y93_05515 79b5f29fcea643289968bf15e4d9e72e 329 Gene3D G3DSA:1.10.10.10 1 86 3.8E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_05515 79b5f29fcea643289968bf15e4d9e72e 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_05515 79b5f29fcea643289968bf15e4d9e72e 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_05515 79b5f29fcea643289968bf15e4d9e72e 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_07055 7d1ed2f4afc6568c6e9d53916b04fc34 292 Gene3D G3DSA:3.90.550.10 3 292 1.6E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_07055 7d1ed2f4afc6568c6e9d53916b04fc34 292 SUPERFAMILY SSF53448 6 290 1.22E-90 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_07055 7d1ed2f4afc6568c6e9d53916b04fc34 292 Pfam PF00483 Nucleotidyl transferase 6 242 5.3E-73 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 C3Y93_07055 7d1ed2f4afc6568c6e9d53916b04fc34 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 6 290 1.4E-155 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 C3Y93_07070 2b6e9b0f8f466a7ab09d54b88accae12 322 SUPERFAMILY SSF53756 11 227 7.22E-5 T 14-10-2018 C3Y93_07070 2b6e9b0f8f466a7ab09d54b88accae12 322 Pfam PF06258 Mitochondrial fission ELM1 149 270 1.4E-15 T 14-10-2018 IPR009367 Mitochondrial fission protein ELM1-like C3Y93_03915 9beb2be0ff7814b76031033622824e1f 89 PIRSF PIRSF002097 1 87 4.3E-35 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 C3Y93_03915 9beb2be0ff7814b76031033622824e1f 89 Pfam PF02954 Bacterial regulatory protein, Fis family 44 83 3.2E-15 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3Y93_03915 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 50 67 1.3E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3Y93_03915 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 67 87 1.3E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C3Y93_03915 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 46 58 2.0E-9 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 C3Y93_03915 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 31 46 2.0E-9 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 C3Y93_03915 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 15 31 2.0E-9 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 C3Y93_03915 9beb2be0ff7814b76031033622824e1f 89 Gene3D G3DSA:1.10.10.60 2 86 7.0E-27 T 14-10-2018 C3Y93_03915 9beb2be0ff7814b76031033622824e1f 89 SUPERFAMILY SSF46689 15 86 6.27E-22 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_12740 a3f43408bd918938e9c295411821ec8d 304 Gene3D G3DSA:3.20.20.70 1 234 1.7E-70 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_12740 a3f43408bd918938e9c295411821ec8d 304 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 1 302 48.753 T 14-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 C3Y93_12740 a3f43408bd918938e9c295411821ec8d 304 PIRSF PIRSF006621 1 303 4.7E-72 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3Y93_12740 a3f43408bd918938e9c295411821ec8d 304 Pfam PF01207 Dihydrouridine synthase (Dus) 1 294 3.5E-66 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3Y93_12740 a3f43408bd918938e9c295411821ec8d 304 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 85 103 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3Y93_12740 a3f43408bd918938e9c295411821ec8d 304 Gene3D G3DSA:1.20.225.30 237 303 3.7E-9 T 14-10-2018 C3Y93_12740 a3f43408bd918938e9c295411821ec8d 304 SUPERFAMILY SSF51395 1 298 2.32E-63 T 14-10-2018 C3Y93_07470 d7762837245194e898528199faf46de9 227 Gene3D G3DSA:4.10.860.20 181 227 4.8E-19 T 14-10-2018 C3Y93_07470 d7762837245194e898528199faf46de9 227 Gene3D G3DSA:2.60.120.620 1 179 1.2E-39 T 14-10-2018 C3Y93_07470 d7762837245194e898528199faf46de9 227 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 227 42.248 T 14-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 C3Y93_07470 d7762837245194e898528199faf46de9 227 SMART SM00702 1 178 5.6E-17 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 C3Y93_07470 d7762837245194e898528199faf46de9 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 177 1.1E-13 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 C3Y93_10220 d6fcf3dad2e4cb0ac2ceb0ae0ba226cf 242 Gene3D G3DSA:3.90.550.20 2 185 4.5E-8 T 14-10-2018 C3Y93_10220 d6fcf3dad2e4cb0ac2ceb0ae0ba226cf 242 SUPERFAMILY SSF53448 1 183 9.75E-13 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_05260 1d0970ba814a9d63e9d7fed536d59323 81 Pfam PF04221 RelB antitoxin 1 70 2.7E-14 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ C3Y93_05260 1d0970ba814a9d63e9d7fed536d59323 81 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 74 1.8E-14 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ C3Y93_05260 1d0970ba814a9d63e9d7fed536d59323 81 Gene3D G3DSA:1.10.1220.10 1 81 3.8E-30 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 C3Y93_08490 dd2da88d25165f4ad00d645c643dc4d1 558 SUPERFAMILY SSF49464 177 257 2.09E-7 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily C3Y93_08490 dd2da88d25165f4ad00d645c643dc4d1 558 Gene3D G3DSA:2.60.40.1120 179 266 3.5E-6 T 14-10-2018 C3Y93_09125 440106d98efc09cd73859a65ca01feac 426 Gene3D G3DSA:3.40.50.2000 219 408 2.4E-62 T 14-10-2018 C3Y93_09125 440106d98efc09cd73859a65ca01feac 426 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 215 6.0E-56 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 C3Y93_09125 440106d98efc09cd73859a65ca01feac 426 Gene3D G3DSA:3.40.50.11720 31 213 8.7E-42 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 C3Y93_09125 440106d98efc09cd73859a65ca01feac 426 SUPERFAMILY SSF53756 176 406 2.92E-11 T 14-10-2018 C3Y93_09125 440106d98efc09cd73859a65ca01feac 426 Pfam PF00534 Glycosyl transferases group 1 254 405 1.2E-7 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3Y93_04315 72056d94806ebeec51e21b30dbe774d6 938 Gene3D G3DSA:3.30.830.10 269 466 3.2E-20 T 14-10-2018 C3Y93_04315 72056d94806ebeec51e21b30dbe774d6 938 SUPERFAMILY SSF63411 38 251 8.29E-51 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3Y93_04315 72056d94806ebeec51e21b30dbe774d6 938 SUPERFAMILY SSF63411 290 448 6.29E-14 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3Y93_04315 72056d94806ebeec51e21b30dbe774d6 938 Pfam PF00675 Insulinase (Peptidase family M16) 56 192 3.0E-17 T 14-10-2018 IPR011765 Peptidase M16, N-terminal C3Y93_04315 72056d94806ebeec51e21b30dbe774d6 938 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 72 95 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 C3Y93_04315 72056d94806ebeec51e21b30dbe774d6 938 Gene3D G3DSA:3.30.830.10 734 923 1.0E-36 T 14-10-2018 C3Y93_04315 72056d94806ebeec51e21b30dbe774d6 938 SUPERFAMILY SSF63411 754 916 8.83E-27 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3Y93_04315 72056d94806ebeec51e21b30dbe774d6 938 Gene3D G3DSA:3.30.830.10 510 722 1.1E-21 T 14-10-2018 C3Y93_04315 72056d94806ebeec51e21b30dbe774d6 938 SUPERFAMILY SSF63411 503 715 7.0E-24 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 C3Y93_04315 72056d94806ebeec51e21b30dbe774d6 938 Gene3D G3DSA:3.30.830.10 36 259 3.7E-56 T 14-10-2018 C3Y93_04315 72056d94806ebeec51e21b30dbe774d6 938 Pfam PF05193 Peptidase M16 inactive domain 677 854 5.9E-21 T 14-10-2018 IPR007863 Peptidase M16, C-terminal C3Y93_04315 72056d94806ebeec51e21b30dbe774d6 938 Pfam PF05193 Peptidase M16 inactive domain 207 379 2.9E-13 T 14-10-2018 IPR007863 Peptidase M16, C-terminal C3Y93_14030 cdfa06320314b1714a46b5ca256eaaaa 272 Pfam PF12697 Alpha/beta hydrolase family 8 256 9.4E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_14030 cdfa06320314b1714a46b5ca256eaaaa 272 SUPERFAMILY SSF53474 2 262 2.72E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_14030 cdfa06320314b1714a46b5ca256eaaaa 272 Gene3D G3DSA:3.40.50.1820 1 270 2.4E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_12875 dacb482be0ab2ca24c38be98e3b7d237 157 SMART SM00257 107 156 8.5E-14 T 14-10-2018 IPR018392 LysM domain C3Y93_12875 dacb482be0ab2ca24c38be98e3b7d237 157 Gene3D G3DSA:3.10.350.10 107 155 2.4E-14 T 14-10-2018 IPR036779 LysM domain superfamily C3Y93_12875 dacb482be0ab2ca24c38be98e3b7d237 157 Pfam PF04972 BON domain 35 99 1.5E-8 T 14-10-2018 IPR007055 BON domain C3Y93_12875 dacb482be0ab2ca24c38be98e3b7d237 157 Pfam PF01476 LysM domain 108 156 2.2E-12 T 14-10-2018 IPR018392 LysM domain C3Y93_12875 dacb482be0ab2ca24c38be98e3b7d237 157 SUPERFAMILY SSF54106 106 156 1.26E-7 T 14-10-2018 C3Y93_03545 f69f8d4986cbf9bbb28d694f59921830 347 Pfam PF12146 Serine aminopeptidase, S33 88 323 3.2E-34 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 C3Y93_03545 f69f8d4986cbf9bbb28d694f59921830 347 Gene3D G3DSA:3.40.50.1820 70 345 7.8E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_03545 f69f8d4986cbf9bbb28d694f59921830 347 SUPERFAMILY SSF53474 72 328 6.61E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_00970 8c01288185a163c81141967a2172140a 389 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 388 6.1E-200 T 14-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 C3Y93_00970 8c01288185a163c81141967a2172140a 389 Gene3D G3DSA:3.90.1150.10 13 379 8.1E-121 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_00970 8c01288185a163c81141967a2172140a 389 Pfam PF00155 Aminotransferase class I and II 30 385 3.9E-52 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3Y93_00970 8c01288185a163c81141967a2172140a 389 Gene3D G3DSA:3.40.640.10 42 287 8.1E-121 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_00970 8c01288185a163c81141967a2172140a 389 SUPERFAMILY SSF53383 2 389 2.55E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_04305 57a90cdf586bc7e576c9feb323f8aa85 133 Pfam PF11342 Protein of unknown function (DUF3144) 20 105 8.6E-30 T 14-10-2018 IPR021490 Protein of unknown function DUF3144 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Gene3D G3DSA:3.40.50.12740 1401 1522 3.9E-39 T 14-10-2018 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SUPERFAMILY SSF50341 1237 1374 8.37E-21 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1101 1236 4.6E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Gene3D G3DSA:1.20.120.160 750 872 5.8E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Gene3D G3DSA:1.20.120.160 541 668 1.6E-24 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Pfam PF00072 Response regulator receiver domain 1403 1514 9.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Gene3D G3DSA:2.40.50.180 1261 1330 1.6E-32 T 14-10-2018 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SMART SM00260 1230 1376 4.7E-24 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Gene3D G3DSA:2.30.30.40 1238 1371 1.6E-32 T 14-10-2018 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Gene3D G3DSA:1.20.120.160 215 336 3.1E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SMART SM00448 1401 1514 1.2E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1182 1192 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1198 1216 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1222 1235 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1142 1156 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Pfam PF01627 Hpt domain 25 98 1.9E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Pfam PF01627 Hpt domain 753 818 6.6E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Pfam PF01627 Hpt domain 542 631 4.7E-13 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Pfam PF01627 Hpt domain 218 295 2.3E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SUPERFAMILY SSF55874 1055 1235 5.63E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SUPERFAMILY SSF47226 539 649 2.22E-25 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SUPERFAMILY SSF47226 217 330 1.44E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Gene3D G3DSA:1.20.120.160 16 115 1.3E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SUPERFAMILY SSF52172 1402 1519 1.85E-37 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SMART SM01231 915 1052 5.1E-9 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Pfam PF01584 CheW-like domain 1243 1378 1.4E-19 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SMART SM00387 1097 1238 1.2E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SUPERFAMILY SSF47226 753 835 2.49E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SMART SM00073 540 637 9.0E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SMART SM00073 748 845 0.031 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SMART SM00073 216 310 1.4E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SMART SM00073 23 120 2.4E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 Gene3D G3DSA:3.30.565.10 1051 1237 4.5E-54 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_05695 ac392b33715f0368b6d66544cd605d50 1523 SUPERFAMILY SSF47226 23 120 1.22E-21 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C3Y93_05715 f241fae8747b4e7489ed04c256f555d4 127 SUPERFAMILY SSF52172 6 125 1.71E-38 T 14-10-2018 IPR011006 CheY-like superfamily C3Y93_05715 f241fae8747b4e7489ed04c256f555d4 127 Gene3D G3DSA:3.40.50.12740 7 127 6.0E-41 T 14-10-2018 C3Y93_05715 f241fae8747b4e7489ed04c256f555d4 127 SMART SM00448 8 121 6.3E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_05715 f241fae8747b4e7489ed04c256f555d4 127 Pfam PF00072 Response regulator receiver domain 10 122 1.7E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C3Y93_05160 f535c38264fee220f4fe02a7615f16b0 472 Gene3D G3DSA:1.20.1740.10 19 472 1.5E-63 T 14-10-2018 C3Y93_05160 f535c38264fee220f4fe02a7615f16b0 472 ProSitePatterns PS00218 Amino acid permeases signature. 52 83 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 C3Y93_05160 f535c38264fee220f4fe02a7615f16b0 472 PIRSF PIRSF006060 1 472 1.2E-74 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 C3Y93_05160 f535c38264fee220f4fe02a7615f16b0 472 Pfam PF00324 Amino acid permease 27 447 6.4E-114 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 C3Y93_01380 5c455b4787394dd9591a84144c89bd71 440 SUPERFAMILY SSF56954 8 403 3.01E-40 T 14-10-2018 C3Y93_01380 5c455b4787394dd9591a84144c89bd71 440 Pfam PF02321 Outer membrane efflux protein 246 398 1.2E-12 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3Y93_01380 5c455b4787394dd9591a84144c89bd71 440 Pfam PF02321 Outer membrane efflux protein 35 208 2.0E-12 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3Y93_01380 5c455b4787394dd9591a84144c89bd71 440 Gene3D G3DSA:1.20.1600.10 11 427 5.7E-34 T 14-10-2018 C3Y93_03245 d0f401cb311ee56aeed028045dc858c9 334 Gene3D G3DSA:3.40.1190.20 11 314 2.2E-78 T 14-10-2018 IPR029056 Ribokinase-like C3Y93_03245 d0f401cb311ee56aeed028045dc858c9 334 SUPERFAMILY SSF53613 2 318 3.59E-77 T 14-10-2018 IPR029056 Ribokinase-like C3Y93_03245 d0f401cb311ee56aeed028045dc858c9 334 Pfam PF00294 pfkB family carbohydrate kinase 47 318 5.7E-54 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB C3Y93_03245 d0f401cb311ee56aeed028045dc858c9 334 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 62 86 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 C3Y93_03245 d0f401cb311ee56aeed028045dc858c9 334 Gene3D G3DSA:3.30.1110.10 14 133 2.2E-78 T 14-10-2018 C3Y93_05605 913e3513c0777bbd9adec750e4b0a0d8 186 Pfam PF14317 YcxB-like protein 108 176 6.9E-20 T 14-10-2018 IPR025588 YcxB-like protein C3Y93_06005 e6bde917459605128fc1d26c3e823023 285 Gene3D G3DSA:2.40.10.350 182 259 1.4E-34 T 14-10-2018 C3Y93_06005 e6bde917459605128fc1d26c3e823023 285 PIRSF PIRSF038471 4 285 7.6E-64 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 C3Y93_06005 e6bde917459605128fc1d26c3e823023 285 Pfam PF04085 rod shape-determining protein MreC 125 271 3.3E-35 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 C3Y93_06005 e6bde917459605128fc1d26c3e823023 285 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 6 276 7.7E-48 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 C3Y93_06005 e6bde917459605128fc1d26c3e823023 285 Gene3D G3DSA:2.40.10.340 123 270 1.4E-34 T 14-10-2018 C3Y93_09435 e09732caffd3a484924ea544f2ba1e11 317 SUPERFAMILY SSF140478 33 171 3.4E-27 T 14-10-2018 IPR023353 LemA-like domain superfamily C3Y93_09435 e09732caffd3a484924ea544f2ba1e11 317 Pfam PF04011 LemA family 14 178 7.5E-34 T 14-10-2018 IPR007156 LemA C3Y93_09435 e09732caffd3a484924ea544f2ba1e11 317 Gene3D G3DSA:1.20.1440.20 23 182 3.6E-30 T 14-10-2018 IPR023353 LemA-like domain superfamily C3Y93_07410 cf44db1e234a72ff5428c4f6522fc27a 249 Gene3D G3DSA:2.170.16.10 12 169 7.1E-12 T 14-10-2018 C3Y93_07410 cf44db1e234a72ff5428c4f6522fc27a 249 Gene3D G3DSA:2.170.16.10 181 235 8.8E-8 T 14-10-2018 C3Y93_07410 cf44db1e234a72ff5428c4f6522fc27a 249 SUPERFAMILY SSF51294 13 234 1.7E-14 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 C3Y93_07410 cf44db1e234a72ff5428c4f6522fc27a 249 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 212 236 1.7E-5 T 14-10-2018 IPR030934 Intein C-terminal splicing region C3Y93_09445 52bca913c6156d64581fbd4abb0df231 280 Pfam PF00581 Rhodanese-like domain 155 266 1.1E-15 T 14-10-2018 IPR001763 Rhodanese-like domain C3Y93_09445 52bca913c6156d64581fbd4abb0df231 280 Pfam PF00581 Rhodanese-like domain 15 123 2.7E-12 T 14-10-2018 IPR001763 Rhodanese-like domain C3Y93_09445 52bca913c6156d64581fbd4abb0df231 280 SMART SM00450 12 127 1.4E-11 T 14-10-2018 IPR001763 Rhodanese-like domain C3Y93_09445 52bca913c6156d64581fbd4abb0df231 280 SMART SM00450 152 271 1.5E-16 T 14-10-2018 IPR001763 Rhodanese-like domain C3Y93_09445 52bca913c6156d64581fbd4abb0df231 280 Gene3D G3DSA:3.40.250.10 143 278 5.6E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3Y93_09445 52bca913c6156d64581fbd4abb0df231 280 SUPERFAMILY SSF52821 11 180 6.68E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3Y93_09445 52bca913c6156d64581fbd4abb0df231 280 SUPERFAMILY SSF52821 147 277 3.67E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3Y93_09445 52bca913c6156d64581fbd4abb0df231 280 Gene3D G3DSA:3.40.250.10 7 140 4.5E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3Y93_10630 544d074c4312eb03786049be72b33085 407 SUPERFAMILY SSF102405 89 295 4.43E-42 T 14-10-2018 C3Y93_10630 544d074c4312eb03786049be72b33085 407 Pfam PF02481 DNA recombination-mediator protein A 87 286 3.5E-73 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 C3Y93_10630 544d074c4312eb03786049be72b33085 407 Gene3D G3DSA:3.40.50.450 3 297 2.2E-90 T 14-10-2018 C3Y93_10630 544d074c4312eb03786049be72b33085 407 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 80 295 2.9E-70 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 C3Y93_12755 b1269edd19ae111e3a1c7160598a3e77 246 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 242 19.282 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 C3Y93_12755 b1269edd19ae111e3a1c7160598a3e77 246 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 236 1.2E-25 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 C3Y93_12755 b1269edd19ae111e3a1c7160598a3e77 246 Gene3D G3DSA:3.30.420.40 6 234 1.0E-46 T 14-10-2018 C3Y93_12755 b1269edd19ae111e3a1c7160598a3e77 246 SUPERFAMILY SSF53067 3 111 4.1E-17 T 14-10-2018 C3Y93_12755 b1269edd19ae111e3a1c7160598a3e77 246 SUPERFAMILY SSF53067 118 241 1.38E-26 T 14-10-2018 C3Y93_12755 b1269edd19ae111e3a1c7160598a3e77 246 Gene3D G3DSA:3.30.420.490 119 227 1.0E-46 T 14-10-2018 C3Y93_12755 b1269edd19ae111e3a1c7160598a3e77 246 Pfam PF03309 Type III pantothenate kinase 4 199 3.6E-40 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 38 55 5.4E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 74 91 0.0058 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 20 37 0.0042 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 56 73 0.0017 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2 19 0.0052 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 PRINTS PR00313 NodO calcium binding signature 45 56 4.1E-13 T 14-10-2018 C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 PRINTS PR00313 NodO calcium binding signature 57 65 4.1E-13 T 14-10-2018 C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 PRINTS PR00313 NodO calcium binding signature 84 93 4.1E-13 T 14-10-2018 C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 PRINTS PR00313 NodO calcium binding signature 75 83 4.1E-13 T 14-10-2018 C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 53 71 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 71 89 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 Gene3D G3DSA:2.150.10.10 1 49 1.2E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 SUPERFAMILY SSF51120 1 167 9.72E-31 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 62 80 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site C3Y93_01230 76c4fd9b358cbff66f2c06fcb3acc96f 195 Gene3D G3DSA:2.150.10.10 50 174 4.7E-23 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal C3Y93_13010 0e02d63dcd2f1a29270018767db82752 686 Pfam PF10136 Site-specific recombinase 26 665 4.3E-220 T 14-10-2018 IPR011385 Putative site-specific recombinase Gcr C3Y93_13010 0e02d63dcd2f1a29270018767db82752 686 PIRSF PIRSF015380 3 681 1.9E-166 T 14-10-2018 IPR011385 Putative site-specific recombinase Gcr C3Y93_00395 dcd58ad279b1e1d5b208c5bcf5f0dc8c 208 SUPERFAMILY SSF81342 13 181 5.89E-13 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 C3Y93_00395 dcd58ad279b1e1d5b208c5bcf5f0dc8c 208 Pfam PF01292 Prokaryotic cytochrome b561 15 180 5.1E-11 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 C3Y93_07550 17a99772c550823cf238ef0b20bc544e 170 SUPERFAMILY SSF53597 6 170 2.57E-49 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 C3Y93_07550 17a99772c550823cf238ef0b20bc544e 170 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 19 41 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 C3Y93_07550 17a99772c550823cf238ef0b20bc544e 170 PRINTS PR00070 Dihydrofolate reductase signature 33 41 4.0E-14 T 14-10-2018 C3Y93_07550 17a99772c550823cf238ef0b20bc544e 170 PRINTS PR00070 Dihydrofolate reductase signature 19 29 4.0E-14 T 14-10-2018 C3Y93_07550 17a99772c550823cf238ef0b20bc544e 170 PRINTS PR00070 Dihydrofolate reductase signature 46 57 4.0E-14 T 14-10-2018 C3Y93_07550 17a99772c550823cf238ef0b20bc544e 170 PRINTS PR00070 Dihydrofolate reductase signature 104 118 4.0E-14 T 14-10-2018 C3Y93_07550 17a99772c550823cf238ef0b20bc544e 170 PIRSF PIRSF000194 3 170 2.5E-54 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 C3Y93_07550 17a99772c550823cf238ef0b20bc544e 170 Gene3D G3DSA:3.40.430.10 2 170 5.1E-52 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 C3Y93_07550 17a99772c550823cf238ef0b20bc544e 170 Pfam PF00186 Dihydrofolate reductase 8 170 1.5E-54 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 C3Y93_02185 b2aef1769970cbe53a2a7a4f3f6e502b 109 SUPERFAMILY SSF82607 7 103 1.27E-28 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily C3Y93_02185 b2aef1769970cbe53a2a7a4f3f6e502b 109 PIRSF PIRSF004555 1 109 1.2E-31 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family C3Y93_02185 b2aef1769970cbe53a2a7a4f3f6e502b 109 Pfam PF02575 YbaB/EbfC DNA-binding family 7 99 3.9E-29 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family C3Y93_02185 b2aef1769970cbe53a2a7a4f3f6e502b 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 105 7.9E-25 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family C3Y93_02185 b2aef1769970cbe53a2a7a4f3f6e502b 109 Gene3D G3DSA:3.30.1310.10 1 109 2.0E-34 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily C3Y93_02185 b2aef1769970cbe53a2a7a4f3f6e502b 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 1 96 20.654 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family C3Y93_07520 557cd7cf33883418a3b808d829c73678 261 Pfam PF00902 Sec-independent protein translocase protein (TatC) 28 238 2.8E-59 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C3Y93_07520 557cd7cf33883418a3b808d829c73678 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 25 52 1.0E-37 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C3Y93_07520 557cd7cf33883418a3b808d829c73678 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 171 199 1.0E-37 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C3Y93_07520 557cd7cf33883418a3b808d829c73678 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 102 120 1.0E-37 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C3Y93_07520 557cd7cf33883418a3b808d829c73678 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 120 146 1.0E-37 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C3Y93_07520 557cd7cf33883418a3b808d829c73678 261 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 255 15.515 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C3Y93_07520 557cd7cf33883418a3b808d829c73678 261 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 26 243 5.0E-63 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C3Y93_08955 c0b9d1e73c2c8964a36830ab6be7eeaf 101 SUPERFAMILY SSF46785 19 98 1.36E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_08955 c0b9d1e73c2c8964a36830ab6be7eeaf 101 Gene3D G3DSA:1.10.10.10 20 101 1.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_08955 c0b9d1e73c2c8964a36830ab6be7eeaf 101 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 5.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_08955 c0b9d1e73c2c8964a36830ab6be7eeaf 101 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 5.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_08955 c0b9d1e73c2c8964a36830ab6be7eeaf 101 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 5.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_08955 c0b9d1e73c2c8964a36830ab6be7eeaf 101 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 80 6.5E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C3Y93_09635 e04da42630d428bc67fa611740425507 129 Gene3D G3DSA:3.10.450.160 61 128 9.1E-14 T 14-10-2018 C3Y93_09635 e04da42630d428bc67fa611740425507 129 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 71 124 5.0E-18 T 14-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB C3Y93_09635 e04da42630d428bc67fa611740425507 129 Pfam PF11776 Nickel/cobalt transporter regulator 76 124 7.7E-16 T 14-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB C3Y93_10735 98773c0d5af1ac5a2da11ad68ddf6f58 208 SUPERFAMILY SSF102405 21 199 3.05E-60 T 14-10-2018 C3Y93_10735 98773c0d5af1ac5a2da11ad68ddf6f58 208 Pfam PF03641 Possible lysine decarboxylase 67 196 3.2E-42 T 14-10-2018 IPR031100 LOG family C3Y93_10735 98773c0d5af1ac5a2da11ad68ddf6f58 208 Gene3D G3DSA:3.40.50.450 17 207 3.4E-72 T 14-10-2018 C3Y93_10735 98773c0d5af1ac5a2da11ad68ddf6f58 208 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 24 198 8.3E-59 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG C3Y93_14175 6b65fcaa5a090e008ebcaa124e05c081 212 Gene3D G3DSA:3.40.50.300 1 211 1.2E-43 T 14-10-2018 C3Y93_14175 6b65fcaa5a090e008ebcaa124e05c081 212 PIRSF PIRSF009320 1 210 1.1E-33 T 14-10-2018 C3Y93_14175 6b65fcaa5a090e008ebcaa124e05c081 212 SUPERFAMILY SSF52540 1 211 7.91E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_14175 6b65fcaa5a090e008ebcaa124e05c081 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 142 5.5E-12 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain C3Y93_00035 e1fe2c3725ff2a695c75665fc685cdf5 204 SUPERFAMILY SSF88946 28 99 1.84E-7 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C3Y93_00035 e1fe2c3725ff2a695c75665fc685cdf5 204 SUPERFAMILY SSF88659 106 194 2.06E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C3Y93_00035 e1fe2c3725ff2a695c75665fc685cdf5 204 Pfam PF04542 Sigma-70 region 2 45 95 4.1E-5 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C3Y93_00035 e1fe2c3725ff2a695c75665fc685cdf5 204 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 42 191 1.2E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C3Y93_00035 e1fe2c3725ff2a695c75665fc685cdf5 204 Pfam PF08281 Sigma-70, region 4 136 188 2.6E-16 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C3Y93_00035 e1fe2c3725ff2a695c75665fc685cdf5 204 Gene3D G3DSA:1.10.10.10 118 197 7.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_04080 9a9d1660988628a3f6e25c6a4445a4ec 344 Pfam PF06067 Domain of unknown function (DUF932) 77 324 7.6E-79 T 14-10-2018 IPR026325 Protein of unknown function DUF932 C3Y93_04080 9a9d1660988628a3f6e25c6a4445a4ec 344 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 340 6.5E-116 T 14-10-2018 IPR017686 Phage/plasmid-like protein C3Y93_09455 c7da1da4eeb0dc75b019f2b78d5c7b3d 146 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 6.6E-54 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 C3Y93_09455 c7da1da4eeb0dc75b019f2b78d5c7b3d 146 Gene3D G3DSA:3.50.80.10 1 145 8.5E-53 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily C3Y93_09455 c7da1da4eeb0dc75b019f2b78d5c7b3d 146 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 2.4E-49 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 C3Y93_09455 c7da1da4eeb0dc75b019f2b78d5c7b3d 146 SUPERFAMILY SSF69500 1 144 6.67E-54 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily C3Y93_09455 c7da1da4eeb0dc75b019f2b78d5c7b3d 146 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 31.755 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 C3Y93_09315 834648e6cd0fd3d9dba95bc479b050c6 121 SUPERFAMILY SSF69754 1 95 7.59E-12 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like C3Y93_09315 834648e6cd0fd3d9dba95bc479b050c6 121 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 7 100 1.3E-8 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 C3Y93_09315 834648e6cd0fd3d9dba95bc479b050c6 121 Gene3D G3DSA:3.30.160.100 1 103 2.8E-6 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like C3Y93_13660 1dd4848c5e32069f1cb35df36ebf22bc 102 Gene3D G3DSA:3.30.2310.20 1 98 5.3E-37 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C3Y93_13660 1dd4848c5e32069f1cb35df36ebf22bc 102 SUPERFAMILY SSF143011 3 93 1.7E-15 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C3Y93_13660 1dd4848c5e32069f1cb35df36ebf22bc 102 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 3 93 2.0E-28 T 14-10-2018 IPR007711 Toxin HigB-1 C3Y93_12315 7145ec19cd075bbd8b4c263ba915c247 135 SUPERFAMILY SSF52821 15 133 4.58E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3Y93_12315 7145ec19cd075bbd8b4c263ba915c247 135 Pfam PF00581 Rhodanese-like domain 47 126 7.4E-13 T 14-10-2018 IPR001763 Rhodanese-like domain C3Y93_12315 7145ec19cd075bbd8b4c263ba915c247 135 SMART SM00450 37 130 3.3E-15 T 14-10-2018 IPR001763 Rhodanese-like domain C3Y93_12315 7145ec19cd075bbd8b4c263ba915c247 135 Gene3D G3DSA:3.40.250.10 37 134 8.7E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C3Y93_12545 9ca29442241faa7ff91793cd71d9211a 437 ProSitePatterns PS00216 Sugar transport proteins signature 1. 302 317 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C3Y93_12545 9ca29442241faa7ff91793cd71d9211a 437 SUPERFAMILY SSF103473 11 432 7.06E-68 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_12545 9ca29442241faa7ff91793cd71d9211a 437 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 27 419 2.7E-138 T 14-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 C3Y93_12545 9ca29442241faa7ff91793cd71d9211a 437 Pfam PF07690 Major Facilitator Superfamily 30 380 3.3E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_12545 9ca29442241faa7ff91793cd71d9211a 437 Gene3D G3DSA:1.20.1250.20 16 436 1.9E-65 T 14-10-2018 C3Y93_07570 505b7c837da84d141240810d50a7f981 212 Gene3D G3DSA:3.90.850.10 1 205 7.9E-63 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 C3Y93_07570 505b7c837da84d141240810d50a7f981 212 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 7 199 2.7E-44 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 C3Y93_07570 505b7c837da84d141240810d50a7f981 212 SUPERFAMILY SSF56529 3 201 2.49E-61 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 C3Y93_05675 a6c5d2058053aa8678c1f9cbef3ac3b4 294 Pfam PF08907 Domain of unknown function (DUF1853) 23 273 2.7E-44 T 14-10-2018 IPR015003 Protein of unknown function DUF1853 C3Y93_04415 41e89426be86d22d9d3ea8945bf46845 56 Gene3D G3DSA:2.10.70.10 19 56 8.8E-18 T 14-10-2018 C3Y93_04415 41e89426be86d22d9d3ea8945bf46845 56 Pfam PF10636 Hemin uptake protein hemP 21 56 1.1E-16 T 14-10-2018 IPR019600 Hemin uptake protein HemP C3Y93_06920 50f34fe9b1ea806a6b51508cf514b062 388 Pfam PF00487 Fatty acid desaturase 42 270 2.1E-18 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 C3Y93_06920 50f34fe9b1ea806a6b51508cf514b062 388 PRINTS PR00075 Fatty acid desaturase family 1 signature 189 210 1.6E-35 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 C3Y93_06920 50f34fe9b1ea806a6b51508cf514b062 388 PRINTS PR00075 Fatty acid desaturase family 1 signature 100 129 1.6E-35 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 C3Y93_06920 50f34fe9b1ea806a6b51508cf514b062 388 PRINTS PR00075 Fatty acid desaturase family 1 signature 62 82 1.6E-35 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 C3Y93_06920 50f34fe9b1ea806a6b51508cf514b062 388 PRINTS PR00075 Fatty acid desaturase family 1 signature 39 61 1.6E-35 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 C3Y93_06920 50f34fe9b1ea806a6b51508cf514b062 388 PRINTS PR00075 Fatty acid desaturase family 1 signature 232 246 1.6E-35 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 C3Y93_06920 50f34fe9b1ea806a6b51508cf514b062 388 PIRSF PIRSF000345 5 309 1.1E-97 T 14-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 C3Y93_03315 38238b738540e9b9d439f3950268f48a 399 SUPERFAMILY SSF47203 239 393 5.15E-33 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C3Y93_03315 38238b738540e9b9d439f3950268f48a 399 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 9.1E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C3Y93_03315 38238b738540e9b9d439f3950268f48a 399 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 241 390 3.9E-40 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C3Y93_03315 38238b738540e9b9d439f3950268f48a 399 Gene3D G3DSA:1.10.540.10 1 128 7.3E-6 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C3Y93_03315 38238b738540e9b9d439f3950268f48a 399 Gene3D G3DSA:1.20.140.10 239 390 3.9E-32 T 14-10-2018 C3Y93_03315 38238b738540e9b9d439f3950268f48a 399 Gene3D G3DSA:2.40.110.10 129 236 4.7E-37 T 14-10-2018 C3Y93_03315 38238b738540e9b9d439f3950268f48a 399 SUPERFAMILY SSF56645 5 252 3.14E-44 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C3Y93_04855 8eba6424b0f800cb5b78514b68899e5e 175 Gene3D G3DSA:2.10.109.10 42 174 6.6E-38 T 14-10-2018 C3Y93_04855 8eba6424b0f800cb5b78514b68899e5e 175 Pfam PF00717 Peptidase S24-like 88 156 2.8E-12 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C C3Y93_04855 8eba6424b0f800cb5b78514b68899e5e 175 SUPERFAMILY SSF51306 45 173 1.09E-23 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily C3Y93_00765 c056ba4b496548c58338f1887450dce9 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 1.2E-8 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C3Y93_00765 c056ba4b496548c58338f1887450dce9 203 Gene3D G3DSA:1.20.1050.10 83 189 2.1E-58 T 14-10-2018 C3Y93_00765 c056ba4b496548c58338f1887450dce9 203 Gene3D G3DSA:3.40.30.10 3 195 2.1E-58 T 14-10-2018 C3Y93_00765 c056ba4b496548c58338f1887450dce9 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 116 189 1.9E-6 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal C3Y93_00765 c056ba4b496548c58338f1887450dce9 203 SUPERFAMILY SSF47616 81 199 3.84E-22 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C3Y93_00765 c056ba4b496548c58338f1887450dce9 203 SUPERFAMILY SSF52833 1 78 8.8E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_06095 77736de22e4864e02bb16e598db00452 251 Pfam PF06414 Zeta toxin 104 196 2.7E-5 T 14-10-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 C3Y93_06095 77736de22e4864e02bb16e598db00452 251 SUPERFAMILY SSF52540 2 217 1.42E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01340 0d90914276e33ecd099ed4ee833f7c9f 191 SUPERFAMILY SSF54427 54 168 1.76E-13 T 14-10-2018 IPR032710 NTF2-like domain superfamily C3Y93_01340 0d90914276e33ecd099ed4ee833f7c9f 191 Gene3D G3DSA:3.10.450.50 47 170 1.1E-7 T 14-10-2018 C3Y93_00290 7679f9321d590942248b34725fed4176 411 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 C3Y93_00290 7679f9321d590942248b34725fed4176 411 Gene3D G3DSA:3.40.640.10 64 286 2.3E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_00290 7679f9321d590942248b34725fed4176 411 Gene3D G3DSA:3.90.1150.10 27 387 2.3E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_00290 7679f9321d590942248b34725fed4176 411 SUPERFAMILY SSF53383 4 392 5.44E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_00290 7679f9321d590942248b34725fed4176 411 Pfam PF00155 Aminotransferase class I and II 33 385 2.5E-73 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C3Y93_05315 fa78240961334ab9b924ffc47e802a42 333 PIRSF PIRSF034367 1 323 1.3E-169 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 C3Y93_05315 fa78240961334ab9b924ffc47e802a42 333 Pfam PF08908 Domain of unknown function (DUF1852) 1 319 4.5E-166 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 C3Y93_00060 c3bb6ca5caf062f81c5f92cc8c13932d 428 Pfam PF07676 WD40-like Beta Propeller Repeat 371 391 0.099 T 14-10-2018 IPR011659 WD40-like Beta Propeller C3Y93_00060 c3bb6ca5caf062f81c5f92cc8c13932d 428 Pfam PF07676 WD40-like Beta Propeller Repeat 278 314 1.9E-10 T 14-10-2018 IPR011659 WD40-like Beta Propeller C3Y93_00060 c3bb6ca5caf062f81c5f92cc8c13932d 428 Pfam PF07676 WD40-like Beta Propeller Repeat 236 270 4.3E-7 T 14-10-2018 IPR011659 WD40-like Beta Propeller C3Y93_00060 c3bb6ca5caf062f81c5f92cc8c13932d 428 Pfam PF07676 WD40-like Beta Propeller Repeat 201 226 0.0024 T 14-10-2018 IPR011659 WD40-like Beta Propeller C3Y93_00060 c3bb6ca5caf062f81c5f92cc8c13932d 428 Gene3D G3DSA:3.40.50.10070 26 161 2.4E-34 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 C3Y93_00060 c3bb6ca5caf062f81c5f92cc8c13932d 428 SUPERFAMILY SSF69304 151 427 3.01E-51 T 14-10-2018 C3Y93_00060 c3bb6ca5caf062f81c5f92cc8c13932d 428 SUPERFAMILY SSF52964 40 158 3.66E-30 T 14-10-2018 C3Y93_00060 c3bb6ca5caf062f81c5f92cc8c13932d 428 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 22 425 3.7E-151 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 C3Y93_00060 c3bb6ca5caf062f81c5f92cc8c13932d 428 Pfam PF04052 TolB amino-terminal domain 31 125 1.5E-21 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 C3Y93_00060 c3bb6ca5caf062f81c5f92cc8c13932d 428 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 12 425 41.263 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 C3Y93_00060 c3bb6ca5caf062f81c5f92cc8c13932d 428 Gene3D G3DSA:2.120.10.30 162 428 3.6E-80 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like C3Y93_10035 d93d2c55d260d495e362ed456fe361e9 379 Gene3D G3DSA:1.10.287.470 93 165 1.8E-68 T 14-10-2018 C3Y93_10035 d93d2c55d260d495e362ed456fe361e9 379 Gene3D G3DSA:2.40.30.170 45 280 1.8E-68 T 14-10-2018 C3Y93_10035 d93d2c55d260d495e362ed456fe361e9 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 268 6.0E-20 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3Y93_10035 d93d2c55d260d495e362ed456fe361e9 379 Gene3D G3DSA:2.40.50.100 59 205 1.8E-68 T 14-10-2018 C3Y93_10035 d93d2c55d260d495e362ed456fe361e9 379 Gene3D G3DSA:2.40.420.20 281 351 1.8E-68 T 14-10-2018 C3Y93_10035 d93d2c55d260d495e362ed456fe361e9 379 SUPERFAMILY SSF111369 48 277 5.1E-19 T 14-10-2018 C3Y93_10035 d93d2c55d260d495e362ed456fe361e9 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 353 1.0E-64 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3Y93_09365 7a98ed59b2713dba2cd0ea1db7ef3f15 179 Pfam PF06041 Bacterial protein of unknown function (DUF924) 7 175 2.4E-59 T 14-10-2018 IPR010323 Protein of unknown function DUF924 C3Y93_09365 7a98ed59b2713dba2cd0ea1db7ef3f15 179 SUPERFAMILY SSF48452 2 175 4.93E-66 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_09365 7a98ed59b2713dba2cd0ea1db7ef3f15 179 Gene3D G3DSA:1.25.40.10 79 179 4.9E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_09365 7a98ed59b2713dba2cd0ea1db7ef3f15 179 Gene3D G3DSA:1.20.58.320 1 78 4.4E-24 T 14-10-2018 C3Y93_04720 caf974b8f4a4a6c87b66b9346fa5ec92 596 Pfam PF01757 Acyltransferase family 5 293 2.0E-32 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 C3Y93_14110 1d292c864f8e257a60c68520e98c4be0 121 Gene3D G3DSA:3.10.180.10 1 121 2.0E-40 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3Y93_14110 1d292c864f8e257a60c68520e98c4be0 121 SUPERFAMILY SSF54593 5 120 6.34E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 Pfam PF00871 Acetokinase family 5 382 3.2E-125 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 SUPERFAMILY SSF53067 149 387 7.0E-79 T 14-10-2018 C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 TIGRFAM TIGR00016 ackA: acetate kinase 4 387 2.6E-129 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 Hamap MF_00020 Acetate kinase [ackA]. 1 391 159.06 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 Gene3D G3DSA:3.30.420.40 190 397 3.4E-71 T 14-10-2018 C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 PRINTS PR00471 Acetate kinase family signature 194 215 2.8E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 PRINTS PR00471 Acetate kinase family signature 369 381 2.8E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 PRINTS PR00471 Acetate kinase family signature 165 178 2.8E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 PRINTS PR00471 Acetate kinase family signature 5 16 2.8E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 PRINTS PR00471 Acetate kinase family signature 313 329 2.8E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 PRINTS PR00471 Acetate kinase family signature 291 304 2.8E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 SUPERFAMILY SSF53067 4 186 9.89E-58 T 14-10-2018 C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 Gene3D G3DSA:3.30.420.40 1 186 7.8E-61 T 14-10-2018 C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3Y93_07380 1cce6e86c3d63b28d91668b37a17588e 405 PIRSF PIRSF000722 1 392 6.3E-129 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 C3Y93_12330 84405a207a6873a092957729835d1bb3 291 PIRSF PIRSF007580 3 278 6.0E-65 T 14-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 C3Y93_12330 84405a207a6873a092957729835d1bb3 291 Pfam PF10118 Predicted metal-dependent hydrolase 16 260 3.2E-74 T 14-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 C3Y93_12330 84405a207a6873a092957729835d1bb3 291 SUPERFAMILY SSF47240 6 184 5.03E-7 T 14-10-2018 IPR009078 Ferritin-like superfamily C3Y93_01575 66ad78b20f3d4d836df6b338fe215e81 391 SUPERFAMILY SSF103473 11 389 3.92E-43 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_01575 66ad78b20f3d4d836df6b338fe215e81 391 Pfam PF07690 Major Facilitator Superfamily 15 350 1.0E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_01575 66ad78b20f3d4d836df6b338fe215e81 391 Gene3D G3DSA:1.20.1250.20 11 190 5.2E-17 T 14-10-2018 C3Y93_01575 66ad78b20f3d4d836df6b338fe215e81 391 Gene3D G3DSA:1.20.1250.20 197 391 9.9E-16 T 14-10-2018 C3Y93_10750 37e331caf02f17535962a72da09e3f3b 155 Pfam PF02810 SEC-C motif 135 152 2.4E-8 T 14-10-2018 IPR004027 SEC-C motif C3Y93_10750 37e331caf02f17535962a72da09e3f3b 155 SUPERFAMILY SSF54427 25 128 3.68E-33 T 14-10-2018 IPR032710 NTF2-like domain superfamily C3Y93_10750 37e331caf02f17535962a72da09e3f3b 155 SUPERFAMILY SSF103642 133 154 1.08E-7 T 14-10-2018 C3Y93_10750 37e331caf02f17535962a72da09e3f3b 155 Gene3D G3DSA:3.10.450.50 2 155 7.3E-57 T 14-10-2018 C3Y93_06520 82024405dba6c64ffd4e8da209ec8874 110 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 3.5E-22 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 C3Y93_06520 82024405dba6c64ffd4e8da209ec8874 110 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 100 1.3E-18 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 C3Y93_06520 82024405dba6c64ffd4e8da209ec8874 110 Gene3D G3DSA:3.30.160.100 1 107 1.9E-26 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like C3Y93_06520 82024405dba6c64ffd4e8da209ec8874 110 SUPERFAMILY SSF69754 1 103 4.32E-24 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like C3Y93_03725 0d72a8e3e403361095093af9e86d1299 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 527 1.9E-22 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C3Y93_03725 0d72a8e3e403361095093af9e86d1299 548 Pfam PF00501 AMP-binding enzyme 42 440 2.7E-69 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3Y93_03725 0d72a8e3e403361095093af9e86d1299 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 191 202 - T 14-10-2018 IPR020845 AMP-binding, conserved site C3Y93_03725 0d72a8e3e403361095093af9e86d1299 548 SUPERFAMILY SSF56801 41 539 5.1E-127 T 14-10-2018 C3Y93_03725 0d72a8e3e403361095093af9e86d1299 548 Gene3D G3DSA:3.30.300.30 437 548 1.6E-27 T 14-10-2018 C3Y93_03725 0d72a8e3e403361095093af9e86d1299 548 Gene3D G3DSA:3.40.50.12780 20 436 1.5E-90 T 14-10-2018 C3Y93_07245 29f55f4f8cf2ff6e1ec6725c1c40999a 310 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 292 8.5E-71 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3Y93_07245 29f55f4f8cf2ff6e1ec6725c1c40999a 310 TIGRFAM TIGR01136 cysKM: cysteine synthase 17 303 9.3E-125 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 C3Y93_07245 29f55f4f8cf2ff6e1ec6725c1c40999a 310 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 41 59 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 C3Y93_07245 29f55f4f8cf2ff6e1ec6725c1c40999a 310 SUPERFAMILY SSF53686 17 303 4.45E-95 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3Y93_07245 29f55f4f8cf2ff6e1ec6725c1c40999a 310 Gene3D G3DSA:3.40.50.1100 46 151 5.0E-113 T 14-10-2018 C3Y93_07245 29f55f4f8cf2ff6e1ec6725c1c40999a 310 TIGRFAM TIGR01138 cysM: cysteine synthase B 16 303 9.7E-149 T 14-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 C3Y93_07245 29f55f4f8cf2ff6e1ec6725c1c40999a 310 Gene3D G3DSA:3.40.50.1100 19 299 5.0E-113 T 14-10-2018 C3Y93_13335 9b4f7ad924fb13fe8fea6d621cfdc548 146 PRINTS PR01438 Universal stress protein signature 123 145 5.2E-21 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_13335 9b4f7ad924fb13fe8fea6d621cfdc548 146 PRINTS PR01438 Universal stress protein signature 3 21 5.2E-21 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_13335 9b4f7ad924fb13fe8fea6d621cfdc548 146 PRINTS PR01438 Universal stress protein signature 105 117 5.2E-21 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_13335 9b4f7ad924fb13fe8fea6d621cfdc548 146 Pfam PF00582 Universal stress protein family 3 145 9.6E-33 T 14-10-2018 IPR006016 UspA C3Y93_13335 9b4f7ad924fb13fe8fea6d621cfdc548 146 SUPERFAMILY SSF52402 3 145 2.01E-40 T 14-10-2018 C3Y93_13335 9b4f7ad924fb13fe8fea6d621cfdc548 146 PIRSF PIRSF006276 1 146 8.8E-23 T 14-10-2018 IPR006015 Universal stress protein A C3Y93_13335 9b4f7ad924fb13fe8fea6d621cfdc548 146 Gene3D G3DSA:3.40.50.620 1 146 5.2E-42 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_06310 1924dfb8d4520dbf5b9ea0216c472fda 293 PIRSF PIRSF007580 2 293 3.7E-70 T 14-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 C3Y93_06310 1924dfb8d4520dbf5b9ea0216c472fda 293 Pfam PF10118 Predicted metal-dependent hydrolase 17 278 5.0E-76 T 14-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 C3Y93_04970 3615ff2af0cd58794a3d6d48e2876fa3 350 SUPERFAMILY SSF56925 117 350 6.8E-16 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel C3Y93_04970 3615ff2af0cd58794a3d6d48e2876fa3 350 Gene3D G3DSA:2.40.160.20 92 350 2.3E-56 T 14-10-2018 C3Y93_04970 3615ff2af0cd58794a3d6d48e2876fa3 350 Pfam PF03922 OmpW family 112 350 5.5E-18 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 C3Y93_05965 e1c1ff9970c760bdb115880039bc90c0 404 Gene3D G3DSA:2.40.160.60 17 404 8.6E-33 T 14-10-2018 C3Y93_05965 e1c1ff9970c760bdb115880039bc90c0 404 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 41 404 7.0E-18 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) C3Y93_05965 e1c1ff9970c760bdb115880039bc90c0 404 SUPERFAMILY SSF56935 19 404 2.62E-52 T 14-10-2018 C3Y93_05430 88d6d25136be533e3f28d9613bbe3509 279 Pfam PF04389 Peptidase family M28 57 271 2.2E-24 T 14-10-2018 IPR007484 Peptidase M28 C3Y93_05430 88d6d25136be533e3f28d9613bbe3509 279 Gene3D G3DSA:3.40.630.10 10 278 2.0E-46 T 14-10-2018 C3Y93_05430 88d6d25136be533e3f28d9613bbe3509 279 SUPERFAMILY SSF53187 16 274 1.37E-35 T 14-10-2018 C3Y93_09040 4534ffad55303c1d4456611f133931c1 100 Pfam PF13744 Helix-turn-helix domain 14 89 7.0E-13 T 14-10-2018 IPR039554 HigA2-like, helix-turn-helix domain C3Y93_09040 4534ffad55303c1d4456611f133931c1 100 SMART SM00530 32 87 8.7E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_09040 4534ffad55303c1d4456611f133931c1 100 SUPERFAMILY SSF47413 20 92 5.09E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_09040 4534ffad55303c1d4456611f133931c1 100 Gene3D G3DSA:1.10.260.40 15 89 3.7E-13 T 14-10-2018 C3Y93_08670 04659398fa1c9947da72b006fbd99cfb 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 86 106 8.5E-35 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_08670 04659398fa1c9947da72b006fbd99cfb 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 149 175 8.5E-35 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_08670 04659398fa1c9947da72b006fbd99cfb 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 107 127 8.5E-35 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_08670 04659398fa1c9947da72b006fbd99cfb 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 35 60 8.5E-35 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_08670 04659398fa1c9947da72b006fbd99cfb 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 65 80 8.5E-35 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_08670 04659398fa1c9947da72b006fbd99cfb 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 192 214 8.5E-35 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 C3Y93_08670 04659398fa1c9947da72b006fbd99cfb 471 Pfam PF00355 Rieske [2Fe-2S] domain 51 134 2.0E-23 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 C3Y93_08670 04659398fa1c9947da72b006fbd99cfb 471 SUPERFAMILY SSF50022 18 164 2.36E-46 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3Y93_08670 04659398fa1c9947da72b006fbd99cfb 471 Gene3D G3DSA:3.90.380.10 27 446 6.3E-102 T 14-10-2018 C3Y93_08670 04659398fa1c9947da72b006fbd99cfb 471 TIGRFAM TIGR03228 anthran_1_2_A: anthranilate 1,2-dioxygenase, large subunit 13 450 7.8E-279 T 14-10-2018 IPR017638 Anthranilate 1,2-dioxygenase, large subunit KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079 C3Y93_08670 04659398fa1c9947da72b006fbd99cfb 471 SUPERFAMILY SSF55961 169 457 2.98E-56 T 14-10-2018 C3Y93_08670 04659398fa1c9947da72b006fbd99cfb 471 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 199 392 2.8E-10 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 C3Y93_08670 04659398fa1c9947da72b006fbd99cfb 471 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 93 116 - T 14-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 C3Y93_08670 04659398fa1c9947da72b006fbd99cfb 471 Gene3D G3DSA:2.102.10.10 50 174 6.3E-102 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3Y93_00370 ca5ed499d3f4c3acc6059178de085e6b 459 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 164 454 4.8E-85 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 C3Y93_00370 ca5ed499d3f4c3acc6059178de085e6b 459 SUPERFAMILY SSF161098 196 446 2.35E-34 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_00370 ca5ed499d3f4c3acc6059178de085e6b 459 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 249 455 1.5E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3Y93_00370 ca5ed499d3f4c3acc6059178de085e6b 459 Pfam PF12501 Phosphate ATP-binding cassette transporter 8 180 7.1E-34 T 14-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 C3Y93_00370 ca5ed499d3f4c3acc6059178de085e6b 459 Gene3D G3DSA:1.10.3720.10 224 457 4.0E-36 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_01665 efddbecb345dc00cee4e334014fe62e8 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 134 8.3E-23 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 C3Y93_01665 efddbecb345dc00cee4e334014fe62e8 140 Gene3D G3DSA:3.30.420.270 60 131 4.9E-6 T 14-10-2018 C3Y93_09680 a93515ab91b5236107e630a3f2f2a0e6 389 Pfam PF07995 Glucose / Sorbosone dehydrogenase 57 385 1.0E-118 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase C3Y93_09680 a93515ab91b5236107e630a3f2f2a0e6 389 Gene3D G3DSA:2.120.10.30 45 389 4.6E-99 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like C3Y93_09680 a93515ab91b5236107e630a3f2f2a0e6 389 SUPERFAMILY SSF50952 42 377 4.32E-44 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 C3Y93_09060 d4162c2421b8bbf0daf23935d19191f0 97 SUPERFAMILY SSF143011 1 84 1.1E-15 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C3Y93_09060 d4162c2421b8bbf0daf23935d19191f0 97 Gene3D G3DSA:3.30.2310.20 1 96 8.7E-23 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C3Y93_09060 d4162c2421b8bbf0daf23935d19191f0 97 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 8 84 2.8E-8 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family C3Y93_09060 d4162c2421b8bbf0daf23935d19191f0 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 8 84 3.4E-10 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family C3Y93_11630 8d6d9c872b2334286971bd958980e9b3 57 Pfam PF03884 DNA gyrase inhibitor YacG 6 54 1.1E-23 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 C3Y93_11630 8d6d9c872b2334286971bd958980e9b3 57 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 57 18.846 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 C3Y93_11630 8d6d9c872b2334286971bd958980e9b3 57 Gene3D G3DSA:3.30.50.10 2 57 5.3E-22 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 C3Y93_11630 8d6d9c872b2334286971bd958980e9b3 57 SUPERFAMILY SSF57716 3 54 2.71E-19 T 14-10-2018 C3Y93_11380 6830705d299ab03bcc219c46e7c5c767 174 SUPERFAMILY SSF74942 104 173 1.57E-10 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily C3Y93_11380 6830705d299ab03bcc219c46e7c5c767 174 SUPERFAMILY SSF75420 3 103 2.75E-19 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily C3Y93_11380 6830705d299ab03bcc219c46e7c5c767 174 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 174 21.001 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 C3Y93_11380 6830705d299ab03bcc219c46e7c5c767 174 Pfam PF02576 RimP N-terminal domain 13 103 2.1E-19 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal C3Y93_11380 6830705d299ab03bcc219c46e7c5c767 174 Gene3D G3DSA:3.30.300.70 2 100 1.0E-17 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily C3Y93_11380 6830705d299ab03bcc219c46e7c5c767 174 Pfam PF17384 RimP C-terminal SH3 domain 107 172 2.5E-12 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal C3Y93_02725 8478ccbe54276967599a7b393362abe5 834 PIRSF PIRSF500064 8 826 3.2E-206 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 C3Y93_02725 8478ccbe54276967599a7b393362abe5 834 Pfam PF01553 Acyltransferase 292 429 4.5E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3Y93_02725 8478ccbe54276967599a7b393362abe5 834 PIRSF PIRSF000437 25 831 1.4E-201 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 C3Y93_02725 8478ccbe54276967599a7b393362abe5 834 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 16 802 1.2E-246 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 C3Y93_02725 8478ccbe54276967599a7b393362abe5 834 SUPERFAMILY SSF69593 275 491 3.4E-21 T 14-10-2018 C3Y93_02725 8478ccbe54276967599a7b393362abe5 834 SMART SM00563 308 435 9.4E-24 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3Y93_04535 3759f125bdd5ab17f17d862c7b468d0e 420 PIRSF PIRSF029171 68 420 3.1E-79 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 C3Y93_04535 3759f125bdd5ab17f17d862c7b468d0e 420 PIRSF PIRSF029171 46 73 0.23 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 C3Y93_04535 3759f125bdd5ab17f17d862c7b468d0e 420 Pfam PF12697 Alpha/beta hydrolase family 105 378 4.5E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_04535 3759f125bdd5ab17f17d862c7b468d0e 420 SUPERFAMILY SSF53474 63 415 1.57E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_04535 3759f125bdd5ab17f17d862c7b468d0e 420 Gene3D G3DSA:3.40.50.1820 334 415 5.6E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_04535 3759f125bdd5ab17f17d862c7b468d0e 420 Gene3D G3DSA:3.40.50.1820 66 259 3.1E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_07850 31f57b0f1c80ee2a0973c3b1656df838 273 Gene3D G3DSA:3.40.50.720 1 273 4.9E-55 T 14-10-2018 C3Y93_07850 31f57b0f1c80ee2a0973c3b1656df838 273 SUPERFAMILY SSF51735 12 227 1.04E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_07850 31f57b0f1c80ee2a0973c3b1656df838 273 Pfam PF13460 NAD(P)H-binding 9 198 7.9E-9 T 14-10-2018 IPR016040 NAD(P)-binding domain C3Y93_00640 7b658f75ab4982cf99f59d8515c1214e 140 Gene3D G3DSA:3.30.300.20 39 139 2.1E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C3Y93_00640 7b658f75ab4982cf99f59d8515c1214e 140 Pfam PF02566 OsmC-like protein 33 132 2.9E-20 T 14-10-2018 IPR003718 OsmC/Ohr family C3Y93_00640 7b658f75ab4982cf99f59d8515c1214e 140 SUPERFAMILY SSF82784 1 138 6.28E-40 T 14-10-2018 IPR036102 OsmC/Ohr superfamily C3Y93_00640 7b658f75ab4982cf99f59d8515c1214e 140 Gene3D G3DSA:2.20.25.10 1 32 1.9E-8 T 14-10-2018 C3Y93_03895 184fb56aec262b05b4a5946de3458827 303 Pfam PF01758 Sodium Bile acid symporter family 12 183 3.3E-28 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 C3Y93_03895 184fb56aec262b05b4a5946de3458827 303 Gene3D G3DSA:1.20.1530.20 3 288 1.9E-64 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily C3Y93_12235 cf9a5a137d6e8418d7f576426d4adf43 298 Pfam PF12146 Serine aminopeptidase, S33 32 259 3.7E-15 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 C3Y93_12235 cf9a5a137d6e8418d7f576426d4adf43 298 Gene3D G3DSA:1.10.10.800 141 223 1.7E-40 T 14-10-2018 C3Y93_12235 cf9a5a137d6e8418d7f576426d4adf43 298 SUPERFAMILY SSF53474 4 295 5.91E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_12235 cf9a5a137d6e8418d7f576426d4adf43 298 Gene3D G3DSA:3.40.50.1820 13 275 1.7E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_02375 75736699c737a0cc790feac5a7792810 244 Pfam PF13098 Thioredoxin-like domain 114 234 5.4E-14 T 14-10-2018 IPR012336 Thioredoxin-like fold C3Y93_02375 75736699c737a0cc790feac5a7792810 244 SUPERFAMILY SSF52833 95 236 4.14E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_02375 75736699c737a0cc790feac5a7792810 244 SUPERFAMILY SSF54423 23 77 5.1E-10 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 C3Y93_02375 75736699c737a0cc790feac5a7792810 244 Gene3D G3DSA:3.10.450.70 22 89 1.4E-19 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 C3Y93_02375 75736699c737a0cc790feac5a7792810 244 Gene3D G3DSA:3.40.30.10 104 244 1.1E-33 T 14-10-2018 C3Y93_03610 2789c53464f1695fb2cd4ed6c6e8ed0d 328 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 15 313 3.4E-87 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 C3Y93_03610 2789c53464f1695fb2cd4ed6c6e8ed0d 328 TIGRFAM TIGR00874 talAB: transaldolase 5 318 2.8E-123 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 C3Y93_03610 2789c53464f1695fb2cd4ed6c6e8ed0d 328 ProSitePatterns PS01054 Transaldolase signature 1. 32 40 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 C3Y93_03610 2789c53464f1695fb2cd4ed6c6e8ed0d 328 SUPERFAMILY SSF51569 4 318 9.0E-98 T 14-10-2018 C3Y93_03610 2789c53464f1695fb2cd4ed6c6e8ed0d 328 ProSitePatterns PS00958 Transaldolase active site. 130 147 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 C3Y93_03610 2789c53464f1695fb2cd4ed6c6e8ed0d 328 Gene3D G3DSA:3.20.20.70 1 324 2.5E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_01740 702fa358fcccbbbd9fc6046911512935 163 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 12 154 41.851 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 C3Y93_01740 702fa358fcccbbbd9fc6046911512935 163 Gene3D G3DSA:3.40.140.10 1 163 6.3E-57 T 14-10-2018 C3Y93_01740 702fa358fcccbbbd9fc6046911512935 163 SUPERFAMILY SSF53927 6 158 1.54E-51 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 C3Y93_01740 702fa358fcccbbbd9fc6046911512935 163 Pfam PF14437 MafB19-like deaminase 8 153 1.6E-31 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 C3Y93_01740 702fa358fcccbbbd9fc6046911512935 163 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 95 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 C3Y93_06715 bd7aa1de5727660cf88d14336bb8a8c4 389 Gene3D G3DSA:3.20.20.10 28 261 1.9E-30 T 14-10-2018 IPR029066 PLP-binding barrel C3Y93_06715 bd7aa1de5727660cf88d14336bb8a8c4 389 SUPERFAMILY SSF51419 26 262 2.62E-20 T 14-10-2018 IPR029066 PLP-binding barrel C3Y93_06715 bd7aa1de5727660cf88d14336bb8a8c4 389 Pfam PF01168 Alanine racemase, N-terminal domain 25 262 7.9E-22 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C3Y93_08590 cbb3c9a4265cde3544c6190f0dae133b 393 Pfam PF12167 Arm DNA-binding domain 1 64 2.2E-24 T 14-10-2018 IPR022000 Min27-like integrase, DNA-binding domain C3Y93_08590 cbb3c9a4265cde3544c6190f0dae133b 393 Gene3D G3DSA:1.10.443.10 185 380 3.6E-38 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3Y93_08590 cbb3c9a4265cde3544c6190f0dae133b 393 SUPERFAMILY SSF56349 85 373 7.36E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3Y93_08590 cbb3c9a4265cde3544c6190f0dae133b 393 Gene3D G3DSA:1.10.150.130 85 184 3.0E-8 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C3Y93_08590 cbb3c9a4265cde3544c6190f0dae133b 393 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 85 141 1.7E-7 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 C3Y93_08590 cbb3c9a4265cde3544c6190f0dae133b 393 Pfam PF00589 Phage integrase family 199 364 1.9E-18 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3Y93_10460 9b88e990373e9b0ff66797901c2c1f39 454 Gene3D G3DSA:1.20.1250.20 1 384 5.7E-67 T 14-10-2018 C3Y93_10460 9b88e990373e9b0ff66797901c2c1f39 454 Gene3D G3DSA:3.30.70.100 385 446 9.4E-9 T 14-10-2018 C3Y93_10460 9b88e990373e9b0ff66797901c2c1f39 454 Pfam PF07690 Major Facilitator Superfamily 15 349 1.6E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_10460 9b88e990373e9b0ff66797901c2c1f39 454 SUPERFAMILY SSF103473 6 384 3.4E-54 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_12385 7d5a748455bf95f0e64b2214447678fb 355 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 41 350 2.1E-113 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 C3Y93_12385 7d5a748455bf95f0e64b2214447678fb 355 Gene3D G3DSA:3.40.50.10800 210 305 2.6E-96 T 14-10-2018 C3Y93_12385 7d5a748455bf95f0e64b2214447678fb 355 SUPERFAMILY SSF142754 39 349 1.2E-108 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 C3Y93_12385 7d5a748455bf95f0e64b2214447678fb 355 Gene3D G3DSA:3.40.50.10800 125 347 2.6E-96 T 14-10-2018 C3Y93_12385 7d5a748455bf95f0e64b2214447678fb 355 Gene3D G3DSA:3.40.50.10800 42 330 2.6E-96 T 14-10-2018 C3Y93_12385 7d5a748455bf95f0e64b2214447678fb 355 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 355 67.228 T 14-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 C3Y93_12385 7d5a748455bf95f0e64b2214447678fb 355 Pfam PF02445 Quinolinate synthetase A protein 42 348 1.5E-103 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 C3Y93_02230 7c78f315e873088203bd6358f02bb225 124 Pfam PF11042 Protein of unknown function (DUF2750) 21 110 3.6E-15 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 C3Y93_05585 eab675a861d13030ecc930dcb4a556a3 413 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 3 410 3.8E-148 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 C3Y93_05585 eab675a861d13030ecc930dcb4a556a3 413 Pfam PF03616 Sodium/glutamate symporter 4 380 1.2E-137 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 C3Y93_05585 eab675a861d13030ecc930dcb4a556a3 413 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 3 411 24.581 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 C3Y93_13585 10b7c7f6fc599d632ed87f06cee89978 209 Gene3D G3DSA:3.40.50.1110 27 209 1.7E-66 T 14-10-2018 IPR036514 SGNH hydrolase superfamily C3Y93_13585 10b7c7f6fc599d632ed87f06cee89978 209 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 34 193 1.6E-26 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain C3Y93_13585 10b7c7f6fc599d632ed87f06cee89978 209 SUPERFAMILY SSF52266 29 207 2.14E-48 T 14-10-2018 C3Y93_02970 a68070b24387c6a9e5a056a1610fc2d7 78 SUPERFAMILY SSF46785 6 58 2.59E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_02970 a68070b24387c6a9e5a056a1610fc2d7 78 Gene3D G3DSA:1.10.10.10 1 73 1.3E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_02970 a68070b24387c6a9e5a056a1610fc2d7 78 Pfam PF09339 IclR helix-turn-helix domain 13 58 7.9E-6 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 C3Y93_12845 15a4112c80a3e1225af3097dcae9feb3 220 Pfam PF04315 Elongation factor P hydroxylase 53 214 3.1E-61 T 14-10-2018 IPR007411 Elongation factor P hydroxylase C3Y93_12060 082f5b120dc6b9e6b45d8289e62f07f0 207 Pfam PF01618 MotA/TolQ/ExbB proton channel family 58 172 4.5E-33 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel C3Y93_11410 e381eb7b1a42c9bac750398f9e40f881 177 PIRSF PIRSF019239 11 174 2.2E-47 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 C3Y93_11410 e381eb7b1a42c9bac750398f9e40f881 177 Pfam PF01899 Na+/H+ ion antiporter subunit 22 168 9.2E-38 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 C3Y93_00260 ed2b444f177d2b559880d68358bfdc4a 236 Pfam PF11967 Recombination protein O N terminal 5 68 8.7E-10 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal C3Y93_00260 ed2b444f177d2b559880d68358bfdc4a 236 Gene3D G3DSA:2.40.50.140 3 68 5.8E-11 T 14-10-2018 C3Y93_00260 ed2b444f177d2b559880d68358bfdc4a 236 SUPERFAMILY SSF50249 3 68 5.48E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_00260 ed2b444f177d2b559880d68358bfdc4a 236 Pfam PF02565 Recombination protein O C terminal 76 226 1.2E-18 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 C3Y93_00260 ed2b444f177d2b559880d68358bfdc4a 236 Gene3D G3DSA:1.20.1440.120 73 236 5.3E-45 T 14-10-2018 C3Y93_00260 ed2b444f177d2b559880d68358bfdc4a 236 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 227 7.6E-14 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 C3Y93_05190 59a1763b55d93a09e6c016af98d96f39 336 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 9 49 6.3E-6 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain C3Y93_05190 59a1763b55d93a09e6c016af98d96f39 336 SUPERFAMILY SSF161098 132 319 3.01E-21 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_05190 59a1763b55d93a09e6c016af98d96f39 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 335 4.0E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3Y93_05190 59a1763b55d93a09e6c016af98d96f39 336 Gene3D G3DSA:1.10.3720.10 125 335 1.8E-18 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_05285 2a1c1a3ea5ec3da277005adb5924b7ec 94 SUPERFAMILY SSF102829 7 80 1.57E-14 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily C3Y93_05285 2a1c1a3ea5ec3da277005adb5924b7ec 94 Gene3D G3DSA:1.10.20.30 1 46 2.9E-7 T 14-10-2018 C3Y93_05285 2a1c1a3ea5ec3da277005adb5924b7ec 94 Pfam PF05164 Cell division protein ZapA 7 78 3.0E-13 T 14-10-2018 IPR007838 Cell division protein ZapA-like C3Y93_03170 7674154597dd2388c99484b158c278b5 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 5.3E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 5.3E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 5.3E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 216 226 5.3E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 278 289 5.3E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 300 9.1E-115 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 300 78.8 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.7E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 287 1.7E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 1.7E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 252 261 1.7E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 SUPERFAMILY SSF53671 2 300 1.83E-102 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 143 1.3E-50 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 296 3.4E-49 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 Gene3D G3DSA:3.40.50.1370 134 294 1.2E-111 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C3Y93_03170 7674154597dd2388c99484b158c278b5 306 Gene3D G3DSA:3.40.50.1370 4 133 1.2E-111 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C3Y93_12230 79069777cf801180553826497d38abe5 111 Pfam PF04273 Putative phosphatase (DUF442) 2 106 4.1E-31 T 14-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 C3Y93_12230 79069777cf801180553826497d38abe5 111 Gene3D G3DSA:3.90.190.10 1 110 2.2E-30 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like C3Y93_12230 79069777cf801180553826497d38abe5 111 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 3 105 1.9E-26 T 14-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 C3Y93_02180 ec5de35fa19100ad6b2b2725d68d424a 395 Gene3D G3DSA:3.40.640.10 6 258 1.6E-87 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C3Y93_02180 ec5de35fa19100ad6b2b2725d68d424a 395 Gene3D G3DSA:3.90.1150.10 261 395 1.1E-52 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C3Y93_02180 ec5de35fa19100ad6b2b2725d68d424a 395 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 13 393 52.921 T 14-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 C3Y93_02180 ec5de35fa19100ad6b2b2725d68d424a 395 SUPERFAMILY SSF53383 23 393 1.18E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C3Y93_02180 ec5de35fa19100ad6b2b2725d68d424a 395 PIRSF PIRSF001434 1 395 5.1E-134 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3Y93_02180 ec5de35fa19100ad6b2b2725d68d424a 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 203 217 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3Y93_02180 ec5de35fa19100ad6b2b2725d68d424a 395 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 12 392 9.8E-177 T 14-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 C3Y93_02180 ec5de35fa19100ad6b2b2725d68d424a 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 392 1.7E-140 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C3Y93_07065 37eb859bed5e8ffc92d726fa076c35de 333 Pfam PF00534 Glycosyl transferases group 1 151 305 1.4E-30 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3Y93_07065 37eb859bed5e8ffc92d726fa076c35de 333 SUPERFAMILY SSF53756 5 330 9.87E-57 T 14-10-2018 C3Y93_07065 37eb859bed5e8ffc92d726fa076c35de 333 Gene3D G3DSA:3.40.50.2000 138 315 3.1E-51 T 14-10-2018 C3Y93_07065 37eb859bed5e8ffc92d726fa076c35de 333 Gene3D G3DSA:3.40.50.2000 6 324 3.1E-51 T 14-10-2018 C3Y93_08540 7800b1067c3a85da70f78851a66e6569 373 SUPERFAMILY SSF55821 2 202 6.41E-86 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily C3Y93_08540 7800b1067c3a85da70f78851a66e6569 373 Gene3D G3DSA:3.90.870.10 1 206 7.3E-87 T 14-10-2018 C3Y93_08540 7800b1067c3a85da70f78851a66e6569 373 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 2.6E-83 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3Y93_08540 7800b1067c3a85da70f78851a66e6569 373 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 3.2E-75 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3Y93_08540 7800b1067c3a85da70f78851a66e6569 373 Pfam PF00925 GTP cyclohydrolase II 211 365 2.1E-29 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3Y93_08540 7800b1067c3a85da70f78851a66e6569 373 SUPERFAMILY SSF142695 205 365 1.11E-33 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C3Y93_08540 7800b1067c3a85da70f78851a66e6569 373 PIRSF PIRSF001259 2 373 1.3E-115 T 14-10-2018 C3Y93_08540 7800b1067c3a85da70f78851a66e6569 373 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.756 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3Y93_00630 85b7394ffebe6e830e1e122041aaabd2 349 Pfam PF00248 Aldo/keto reductase family 15 340 8.6E-66 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain C3Y93_00630 85b7394ffebe6e830e1e122041aaabd2 349 Gene3D G3DSA:3.20.20.100 1 349 7.6E-124 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily C3Y93_00630 85b7394ffebe6e830e1e122041aaabd2 349 SUPERFAMILY SSF51430 1 347 1.44E-103 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily C3Y93_10950 a9e7aab641b5826d728dfc8176a8bf89 79 Pfam PF17032 zinc-ribbon family 20 70 1.5E-10 T 14-10-2018 IPR031493 Zinc-ribbon 15 C3Y93_08155 4c31cfa32139681791fb964051f31251 93 SMART SM01409 8 61 1.9E-18 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 C3Y93_08155 4c31cfa32139681791fb964051f31251 93 SUPERFAMILY SSF63562 1 69 6.8E-26 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 C3Y93_08155 4c31cfa32139681791fb964051f31251 93 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.2E-22 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_08155 4c31cfa32139681791fb964051f31251 93 Gene3D G3DSA:3.90.940.10 1 84 1.6E-27 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 C3Y93_08155 4c31cfa32139681791fb964051f31251 93 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.573 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C3Y93_08155 4c31cfa32139681791fb964051f31251 93 Pfam PF01192 RNA polymerase Rpb6 8 59 3.0E-18 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 C3Y93_06080 61808c657a60c908c9bf6e2acb93861d 402 Pfam PF12704 MacB-like periplasmic core domain 19 256 3.5E-15 T 14-10-2018 IPR025857 MacB-like periplasmic core domain C3Y93_06080 61808c657a60c908c9bf6e2acb93861d 402 Pfam PF02687 FtsX-like permease family 313 396 4.0E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 C3Y93_12555 3364b1091bc4017b0a79297152874786 406 Gene3D G3DSA:3.40.50.150 152 280 4.6E-10 T 14-10-2018 C3Y93_12555 3364b1091bc4017b0a79297152874786 406 SUPERFAMILY SSF53335 173 295 1.61E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_12555 3364b1091bc4017b0a79297152874786 406 Pfam PF13679 Methyltransferase domain 163 298 1.7E-29 T 14-10-2018 IPR025714 Methyltransferase domain C3Y93_04750 61c0f9f41f649241b0cecf2ba3b5dfe0 947 Gene3D G3DSA:1.10.530.10 344 508 2.1E-29 T 14-10-2018 C3Y93_04750 61c0f9f41f649241b0cecf2ba3b5dfe0 947 SUPERFAMILY SSF53955 354 432 2.68E-9 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3Y93_02330 af2fd229297202e99889939eef2ca2aa 288 Pfam PF00753 Metallo-beta-lactamase superfamily 14 204 4.2E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_02330 af2fd229297202e99889939eef2ca2aa 288 SUPERFAMILY SSF56281 7 253 7.99E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_02330 af2fd229297202e99889939eef2ca2aa 288 SMART SM00849 14 204 1.1E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_02330 af2fd229297202e99889939eef2ca2aa 288 Gene3D G3DSA:3.60.15.10 1 287 3.1E-104 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_08580 87e2b70ae2ce1af358dd3ca8ae48fd7f 82 Gene3D G3DSA:1.10.260.40 1 71 2.9E-11 T 14-10-2018 C3Y93_08580 87e2b70ae2ce1af358dd3ca8ae48fd7f 82 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 65 5.0E-19 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C3Y93_08580 87e2b70ae2ce1af358dd3ca8ae48fd7f 82 SUPERFAMILY SSF47413 2 63 3.38E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C3Y93_07900 7fdecf054e48c8b6e4a8ded6d25b4299 272 Pfam PF00005 ABC transporter 29 177 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_07900 7fdecf054e48c8b6e4a8ded6d25b4299 272 SUPERFAMILY SSF52540 12 242 3.17E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_07900 7fdecf054e48c8b6e4a8ded6d25b4299 272 Gene3D G3DSA:3.40.50.300 10 267 1.7E-66 T 14-10-2018 C3Y93_07900 7fdecf054e48c8b6e4a8ded6d25b4299 272 SMART SM00382 37 233 2.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_10435 2381880d389fd64731c1101d9b9fade2 295 Pfam PF16956 Putative general bacterial porin 1 293 1.7E-19 T 14-10-2018 IPR031593 Putative general bacterial porin C3Y93_02305 161982dffde6c1f8a74c6cf45b564c24 183 Gene3D G3DSA:1.10.530.10 46 181 2.6E-28 T 14-10-2018 C3Y93_02305 161982dffde6c1f8a74c6cf45b564c24 183 Pfam PF01464 Transglycosylase SLT domain 66 167 1.1E-16 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C3Y93_02305 161982dffde6c1f8a74c6cf45b564c24 183 SUPERFAMILY SSF53955 45 180 3.85E-30 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3Y93_10720 5685fc81b6f1fe3cbfed98c555de3df6 645 Pfam PF01757 Acyltransferase family 4 317 8.7E-27 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 C3Y93_14145 fb4195ea80aa944d306d27b4bfa66d3c 180 Pfam PF05713 Bacterial mobilisation protein (MobC) 91 139 2.9E-7 T 14-10-2018 IPR008687 Bacterial mobilisation C3Y93_10780 6067053e3731df535fb8cb9638689911 132 SUPERFAMILY SSF161084 7 129 6.54E-27 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily C3Y93_10780 6067053e3731df535fb8cb9638689911 132 Gene3D G3DSA:1.20.120.550 3 131 1.6E-17 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily C3Y93_10780 6067053e3731df535fb8cb9638689911 132 Pfam PF01124 MAPEG family 8 129 1.1E-24 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein C3Y93_02175 2d7fe78c5ca3811e8c39f4b909b49d63 364 SUPERFAMILY SSF53474 48 357 2.73E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_02175 2d7fe78c5ca3811e8c39f4b909b49d63 364 Pfam PF00561 alpha/beta hydrolase fold 75 338 1.2E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_02175 2d7fe78c5ca3811e8c39f4b909b49d63 364 Gene3D G3DSA:3.40.50.1820 43 362 1.6E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_01590 157881f6f216242bcd6ab3a5e62a697d 147 Gene3D G3DSA:3.40.630.30 2 139 7.5E-35 T 14-10-2018 C3Y93_01590 157881f6f216242bcd6ab3a5e62a697d 147 PIRSF PIRSF037663 1 144 6.3E-11 T 14-10-2018 IPR017255 Acetyltransferase, GNAT, predicted C3Y93_01590 157881f6f216242bcd6ab3a5e62a697d 147 SUPERFAMILY SSF55729 1 143 3.82E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3Y93_01590 157881f6f216242bcd6ab3a5e62a697d 147 Pfam PF00583 Acetyltransferase (GNAT) family 35 133 1.1E-14 T 14-10-2018 IPR000182 GNAT domain C3Y93_13340 c7298830c3b5f807dbcb03a4580c73a1 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 7.7E-10 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_13340 c7298830c3b5f807dbcb03a4580c73a1 212 Gene3D G3DSA:2.160.10.10 7 211 6.8E-57 T 14-10-2018 C3Y93_13340 c7298830c3b5f807dbcb03a4580c73a1 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 C3Y93_13340 c7298830c3b5f807dbcb03a4580c73a1 212 SUPERFAMILY SSF51161 65 205 1.8E-39 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3Y93_04685 09d6499c3999e67d7868eadbeb75572a 61 Pfam PF13817 IS66 C-terminal element 30 56 7.1E-8 T 14-10-2018 IPR039552 Transposase IS66, C-terminal C3Y93_05880 4bb788b64b21f086ec20c6e76752933e 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 18.086 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 C3Y93_05880 4bb788b64b21f086ec20c6e76752933e 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 96 1.1E-22 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like C3Y93_08095 6c41061c486444fb031f1aa5df39f5e1 248 PIRSF PIRSF000386 1 248 3.5E-91 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C3Y93_08095 6c41061c486444fb031f1aa5df39f5e1 248 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 248 102.495 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C3Y93_08095 6c41061c486444fb031f1aa5df39f5e1 248 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 225 6.4E-55 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C3Y93_08095 6c41061c486444fb031f1aa5df39f5e1 248 Gene3D G3DSA:3.40.1280.10 1 169 1.3E-62 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C3Y93_08095 6c41061c486444fb031f1aa5df39f5e1 248 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 2 238 3.8E-91 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C3Y93_08095 6c41061c486444fb031f1aa5df39f5e1 248 SUPERFAMILY SSF75217 3 245 4.03E-96 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C3Y93_08095 6c41061c486444fb031f1aa5df39f5e1 248 Gene3D G3DSA:1.10.1270.20 170 248 1.4E-30 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C3Y93_03965 9939100983ee2898b0a1efd1a4e02a13 664 Gene3D G3DSA:3.40.50.1820 371 647 1.4E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_03965 9939100983ee2898b0a1efd1a4e02a13 664 SUPERFAMILY SSF53474 373 639 2.8E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_12560 1c3bbbbf44fbfaa2733c13fe57c2b555 140 Pfam PF13673 Acetyltransferase (GNAT) domain 36 139 2.0E-21 T 14-10-2018 IPR000182 GNAT domain C3Y93_12560 1c3bbbbf44fbfaa2733c13fe57c2b555 140 SUPERFAMILY SSF55729 4 138 1.68E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3Y93_12560 1c3bbbbf44fbfaa2733c13fe57c2b555 140 Gene3D G3DSA:3.40.630.30 6 138 3.1E-38 T 14-10-2018 C3Y93_11155 38e5ca4906234c80e0d5099ac0a8ce9c 283 Gene3D G3DSA:3.40.50.1820 15 281 1.7E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_11155 38e5ca4906234c80e0d5099ac0a8ce9c 283 Pfam PF07859 alpha/beta hydrolase fold 65 161 1.8E-15 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 C3Y93_11155 38e5ca4906234c80e0d5099ac0a8ce9c 283 SUPERFAMILY SSF53474 21 262 4.43E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_08640 63751376e725b1fa0328ae9dcf4fb16f 436 TIGRFAM TIGR03236 dnd_assoc_1: DNA phosphorothioation-dependent restriction protein DptG 86 436 4.4E-83 T 14-10-2018 IPR017645 DNA phosphorothioation-dependent restriction protein DptG C3Y93_04475 b4ba0ba9a920ac41e3754748dcdd9f89 234 SUPERFAMILY SSF52218 4 220 5.82E-64 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3Y93_04475 b4ba0ba9a920ac41e3754748dcdd9f89 234 Pfam PF03358 NADPH-dependent FMN reductase 28 170 5.2E-27 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 C3Y93_04475 b4ba0ba9a920ac41e3754748dcdd9f89 234 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 3 220 1.3E-116 T 14-10-2018 IPR014063 Arsenate resistance ArsH C3Y93_04475 b4ba0ba9a920ac41e3754748dcdd9f89 234 Gene3D G3DSA:3.40.50.360 1 234 2.8E-77 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C3Y93_14210 eaad9bc54a5a3c9afb9e13aae53a3d28 524 Gene3D G3DSA:3.40.50.150 200 476 6.6E-88 T 14-10-2018 C3Y93_14210 eaad9bc54a5a3c9afb9e13aae53a3d28 524 Pfam PF02384 N-6 DNA Methylase 178 482 5.7E-111 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 C3Y93_14210 eaad9bc54a5a3c9afb9e13aae53a3d28 524 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 7 498 1.2E-140 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 C3Y93_14210 eaad9bc54a5a3c9afb9e13aae53a3d28 524 Gene3D G3DSA:1.20.1260.30 1 196 4.3E-58 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily C3Y93_14210 eaad9bc54a5a3c9afb9e13aae53a3d28 524 SUPERFAMILY SSF53335 7 517 4.27E-133 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_14210 eaad9bc54a5a3c9afb9e13aae53a3d28 524 Pfam PF12161 HsdM N-terminal domain 9 166 8.4E-19 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain C3Y93_14210 eaad9bc54a5a3c9afb9e13aae53a3d28 524 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 297 309 1.7E-22 T 14-10-2018 C3Y93_14210 eaad9bc54a5a3c9afb9e13aae53a3d28 524 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 333 357 1.7E-22 T 14-10-2018 C3Y93_14210 eaad9bc54a5a3c9afb9e13aae53a3d28 524 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 202 218 1.7E-22 T 14-10-2018 C3Y93_14210 eaad9bc54a5a3c9afb9e13aae53a3d28 524 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 228 242 1.7E-22 T 14-10-2018 C3Y93_13060 5d600dbcc27932b2232758f4663fd872 464 PIRSF PIRSF006060 2 463 3.1E-65 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 C3Y93_13060 5d600dbcc27932b2232758f4663fd872 464 Pfam PF13520 Amino acid permease 54 441 3.6E-37 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 C3Y93_13060 5d600dbcc27932b2232758f4663fd872 464 Gene3D G3DSA:1.20.1740.10 12 459 5.4E-71 T 14-10-2018 C3Y93_02215 67f4163eb24188f406f00483d8c1912c 395 Pfam PF05762 VWA domain containing CoxE-like protein 189 277 9.4E-9 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like C3Y93_03115 021ac77af50b028b293acd85ac59e339 101 Pfam PF14131 Domain of unknown function (DUF4298) 11 93 8.2E-21 T 14-10-2018 IPR025384 Protein of unknown function DUF4298 C3Y93_06215 83b623e98e875324baba7df13fe0392f 151 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 123 6.2E-32 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 C3Y93_06215 83b623e98e875324baba7df13fe0392f 151 SUPERFAMILY SSF47188 2 124 3.14E-29 T 14-10-2018 IPR035938 Hemerythrin-like superfamily C3Y93_06215 83b623e98e875324baba7df13fe0392f 151 Gene3D G3DSA:1.20.120.50 1 127 2.3E-32 T 14-10-2018 IPR035938 Hemerythrin-like superfamily C3Y93_06215 83b623e98e875324baba7df13fe0392f 151 Pfam PF01814 Hemerythrin HHE cation binding domain 12 124 7.6E-10 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 C3Y93_06930 eefdcc6e2494be7410e07a3f87179334 157 SUPERFAMILY SSF142906 14 122 3.27E-31 T 14-10-2018 IPR038056 YjbR-like superfamily C3Y93_06930 eefdcc6e2494be7410e07a3f87179334 157 Gene3D G3DSA:3.90.1150.30 1 131 2.3E-32 T 14-10-2018 IPR038056 YjbR-like superfamily C3Y93_06930 eefdcc6e2494be7410e07a3f87179334 157 Pfam PF04237 YjbR 18 108 4.5E-16 T 14-10-2018 IPR007351 Uncharacterised protein YjbR C3Y93_03250 9efc949e167eef64393edeb40c62b234 108 Gene3D G3DSA:2.102.10.10 1 108 3.1E-17 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3Y93_03250 9efc949e167eef64393edeb40c62b234 108 Pfam PF00355 Rieske [2Fe-2S] domain 3 87 2.7E-13 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 C3Y93_03250 9efc949e167eef64393edeb40c62b234 108 SUPERFAMILY SSF50022 3 105 2.49E-23 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C3Y93_07120 c46ea7bea7ea6b89bdf9eac18d666699 127 Pfam PF13511 Domain of unknown function (DUF4124) 18 64 1.1E-6 T 14-10-2018 IPR025392 Domain of unknown function DUF4124 C3Y93_14025 3af02f05502d057c90e263703eb0610b 340 Pfam PF01343 Peptidase family S49 147 299 2.1E-37 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 C3Y93_14025 3af02f05502d057c90e263703eb0610b 340 SUPERFAMILY SSF52096 75 286 2.94E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_14025 3af02f05502d057c90e263703eb0610b 340 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 84 288 2.2E-49 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 C3Y93_14025 3af02f05502d057c90e263703eb0610b 340 Gene3D G3DSA:3.40.1750.20 188 254 6.4E-66 T 14-10-2018 C3Y93_14025 3af02f05502d057c90e263703eb0610b 340 Gene3D G3DSA:3.90.226.10 85 288 6.4E-66 T 14-10-2018 C3Y93_08460 d21ef7323fc01641c2a0c4fd6a0ade1a 302 SUPERFAMILY SSF103481 46 144 1.14E-11 T 14-10-2018 C3Y93_08460 d21ef7323fc01641c2a0c4fd6a0ade1a 302 Pfam PF00892 EamA-like transporter family 15 141 6.1E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_08460 d21ef7323fc01641c2a0c4fd6a0ade1a 302 Pfam PF00892 EamA-like transporter family 154 284 1.4E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_08460 d21ef7323fc01641c2a0c4fd6a0ade1a 302 SUPERFAMILY SSF103481 188 289 4.58E-12 T 14-10-2018 C3Y93_01065 0121e8f42ca8ad7c803601ed81c0b0a6 151 SUPERFAMILY SSF46689 20 133 5.02E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_02070 10d404c992dc5ec2c4c742153f9e892c 493 SMART SM00044 177 388 3.0E-16 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 C3Y93_02070 10d404c992dc5ec2c4c742153f9e892c 493 Gene3D G3DSA:3.30.70.1230 218 412 4.7E-64 T 14-10-2018 IPR029787 Nucleotide cyclase C3Y93_02070 10d404c992dc5ec2c4c742153f9e892c 493 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 224 407 3.7E-34 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 C3Y93_02070 10d404c992dc5ec2c4c742153f9e892c 493 SUPERFAMILY SSF55073 223 407 1.04E-54 T 14-10-2018 IPR029787 Nucleotide cyclase C3Y93_09915 db06cd2bf1320cbd69bd807902eb3388 223 Pfam PF06314 Acetoacetate decarboxylase (ADC) 4 133 4.7E-13 T 14-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 C3Y93_09915 db06cd2bf1320cbd69bd807902eb3388 223 Gene3D G3DSA:2.40.400.10 3 132 1.7E-16 T 14-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 C3Y93_09915 db06cd2bf1320cbd69bd807902eb3388 223 SUPERFAMILY SSF160104 12 131 2.22E-17 T 14-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 C3Y93_06805 b942a12b255f5391c92876a84a1ff0bf 431 SUPERFAMILY SSF55681 7 324 4.77E-96 T 14-10-2018 C3Y93_06805 b942a12b255f5391c92876a84a1ff0bf 431 SUPERFAMILY SSF52954 343 427 1.8E-15 T 14-10-2018 C3Y93_06805 b942a12b255f5391c92876a84a1ff0bf 431 Gene3D G3DSA:3.30.930.10 2 326 1.3E-109 T 14-10-2018 C3Y93_06805 b942a12b255f5391c92876a84a1ff0bf 431 PIRSF PIRSF001549 1 428 3.9E-119 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 C3Y93_06805 b942a12b255f5391c92876a84a1ff0bf 431 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 416 3.1E-146 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 C3Y93_06805 b942a12b255f5391c92876a84a1ff0bf 431 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 430 31.582 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 C3Y93_06805 b942a12b255f5391c92876a84a1ff0bf 431 Pfam PF13393 Histidyl-tRNA synthetase 9 316 5.3E-45 T 14-10-2018 C3Y93_06805 b942a12b255f5391c92876a84a1ff0bf 431 Gene3D G3DSA:3.40.50.800 329 427 7.2E-25 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily C3Y93_06805 b942a12b255f5391c92876a84a1ff0bf 431 Pfam PF03129 Anticodon binding domain 345 426 9.5E-12 T 14-10-2018 IPR004154 Anticodon-binding C3Y93_05770 d880e98051c5ef11a415345411a1ae83 417 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 161 402 6.6E-96 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 C3Y93_05770 d880e98051c5ef11a415345411a1ae83 417 SUPERFAMILY SSF52540 155 385 1.35E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_05770 d880e98051c5ef11a415345411a1ae83 417 Hamap MF_02040 Iron-sulfur cluster carrier protein. 153 403 36.0 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein C3Y93_05770 d880e98051c5ef11a415345411a1ae83 417 ProSitePatterns PS01215 Mrp family signature. 268 284 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 C3Y93_05770 d880e98051c5ef11a415345411a1ae83 417 Gene3D G3DSA:3.40.50.300 152 401 1.9E-78 T 14-10-2018 C3Y93_05310 6d52a8b8516c1884545e5d58bb6bc903 342 Gene3D G3DSA:3.20.20.210 1 342 5.6E-135 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 C3Y93_05310 6d52a8b8516c1884545e5d58bb6bc903 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 2.6E-39 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 C3Y93_05310 6d52a8b8516c1884545e5d58bb6bc903 342 SUPERFAMILY SSF51726 7 340 8.24E-70 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 C3Y93_05310 6d52a8b8516c1884545e5d58bb6bc903 342 PIRSF PIRSF005632 1 342 5.3E-196 T 14-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit C3Y93_03120 ca5c8674f74b2e2038a1589c667a2ca6 117 SUPERFAMILY SSF141488 58 107 1.57E-5 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily C3Y93_13715 f86d1c41561aa99e7947621341c60304 97 ProDom PD468738 PHENOL HYDROXYLASE COMPONENT SUBUNIT PHENOLHYDROXYLASE MONOOXYGENASE TOMA0 P0 HYDROCARBONS IRON 10 51 4.0E-15 T 14-10-2018 IPR010353 Phenol hydroxylase subunit KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 C3Y93_13715 f86d1c41561aa99e7947621341c60304 97 Pfam PF06099 Phenol hydroxylase subunit 11 59 3.0E-20 T 14-10-2018 IPR010353 Phenol hydroxylase subunit KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 C3Y93_00960 aa347cead1ff3a5a3c5ad4a1e8c9ed57 139 Gene3D G3DSA:2.170.150.20 2 139 8.4E-63 T 14-10-2018 C3Y93_00960 aa347cead1ff3a5a3c5ad4a1e8c9ed57 139 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 137 2.3E-58 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 C3Y93_00960 aa347cead1ff3a5a3c5ad4a1e8c9ed57 139 SUPERFAMILY SSF51316 5 137 7.32E-60 T 14-10-2018 IPR011057 Mss4-like superfamily C3Y93_00960 aa347cead1ff3a5a3c5ad4a1e8c9ed57 139 Pfam PF01641 SelR domain 10 128 1.4E-55 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 C3Y93_00960 aa347cead1ff3a5a3c5ad4a1e8c9ed57 139 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 36.81 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 C3Y93_10170 bb58ea9b6390d82edea6f3cffc78aa89 343 SUPERFAMILY SSF51735 1 339 1.31E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_10170 bb58ea9b6390d82edea6f3cffc78aa89 343 Gene3D G3DSA:3.90.25.10 193 335 8.0E-115 T 14-10-2018 C3Y93_10170 bb58ea9b6390d82edea6f3cffc78aa89 343 Gene3D G3DSA:3.40.50.720 19 323 8.0E-115 T 14-10-2018 C3Y93_10170 bb58ea9b6390d82edea6f3cffc78aa89 343 Pfam PF01370 NAD dependent epimerase/dehydratase family 18 264 9.6E-55 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 C3Y93_10170 bb58ea9b6390d82edea6f3cffc78aa89 343 PRINTS PR01713 Nucleotide sugar epimerase signature 233 248 6.3E-6 T 14-10-2018 C3Y93_10170 bb58ea9b6390d82edea6f3cffc78aa89 343 PRINTS PR01713 Nucleotide sugar epimerase signature 258 273 6.3E-6 T 14-10-2018 C3Y93_10170 bb58ea9b6390d82edea6f3cffc78aa89 343 PRINTS PR01713 Nucleotide sugar epimerase signature 302 319 6.3E-6 T 14-10-2018 C3Y93_10170 bb58ea9b6390d82edea6f3cffc78aa89 343 PRINTS PR01713 Nucleotide sugar epimerase signature 44 60 6.3E-6 T 14-10-2018 C3Y93_13460 93bdf7a384d75f99158ec884d0d40ffe 257 SUPERFAMILY SSF56300 2 229 4.22E-38 T 14-10-2018 C3Y93_13460 93bdf7a384d75f99158ec884d0d40ffe 257 Pfam PF00149 Calcineurin-like phosphoesterase 2 190 5.3E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C3Y93_13460 93bdf7a384d75f99158ec884d0d40ffe 257 Gene3D G3DSA:3.60.21.10 1 254 5.7E-27 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C3Y93_11755 3f0c572024a3379d522ad13943b32b94 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 2.4E-30 T 14-10-2018 C3Y93_11755 3f0c572024a3379d522ad13943b32b94 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 75 176 5.0E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C3Y93_11755 3f0c572024a3379d522ad13943b32b94 222 Gene3D G3DSA:1.10.150.240 20 83 5.1E-48 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 C3Y93_11755 3f0c572024a3379d522ad13943b32b94 222 SUPERFAMILY SSF56784 3 213 6.42E-52 T 14-10-2018 IPR036412 HAD-like superfamily C3Y93_11755 3f0c572024a3379d522ad13943b32b94 222 Gene3D G3DSA:3.40.50.1000 8 204 5.1E-48 T 14-10-2018 IPR023214 HAD superfamily C3Y93_10125 6cdf1513d177f4ab28f7674966d911c5 310 Pfam PF13737 Transposase DDE domain 23 130 5.2E-42 T 14-10-2018 IPR025668 Transposase DDE domain C3Y93_09350 e70ed4402d8c6f80fcabac2cb51ff139 443 Gene3D G3DSA:3.40.50.1820 154 416 5.7E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_09350 e70ed4402d8c6f80fcabac2cb51ff139 443 Pfam PF07819 PGAP1-like protein 154 375 2.2E-31 T 14-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 C3Y93_09350 e70ed4402d8c6f80fcabac2cb51ff139 443 SUPERFAMILY SSF53474 156 373 5.72E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_03535 cbe86e286cf72ac5d2f1c0ab82fef7c6 636 SUPERFAMILY SSF55874 504 618 1.08E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_03535 cbe86e286cf72ac5d2f1c0ab82fef7c6 636 Gene3D G3DSA:3.30.565.10 503 626 4.7E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C3Y93_03535 cbe86e286cf72ac5d2f1c0ab82fef7c6 636 SMART SM00387 534 629 3.3E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C3Y93_06360 fa6bdc2b8dfef9f15af74198216bb547 255 Gene3D G3DSA:3.40.1190.20 1 237 2.8E-77 T 14-10-2018 IPR029056 Ribokinase-like C3Y93_06360 fa6bdc2b8dfef9f15af74198216bb547 255 Pfam PF08543 Phosphomethylpyrimidine kinase 12 241 5.1E-68 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 C3Y93_06360 fa6bdc2b8dfef9f15af74198216bb547 255 SUPERFAMILY SSF53613 2 240 1.24E-59 T 14-10-2018 IPR029056 Ribokinase-like C3Y93_11110 cc91a408e1ed3eeec56254865b2b5256 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 176 22.812 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C3Y93_11110 cc91a408e1ed3eeec56254865b2b5256 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 175 7.7E-63 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C3Y93_11110 cc91a408e1ed3eeec56254865b2b5256 177 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 9.0E-16 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C3Y93_11110 cc91a408e1ed3eeec56254865b2b5256 177 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 9.0E-16 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C3Y93_11110 cc91a408e1ed3eeec56254865b2b5256 177 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 9.0E-16 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C3Y93_11110 cc91a408e1ed3eeec56254865b2b5256 177 Gene3D G3DSA:3.30.70.940 1 117 2.5E-46 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 C3Y93_11110 cc91a408e1ed3eeec56254865b2b5256 177 SMART SM00738 1 110 2.1E-44 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 C3Y93_11110 cc91a408e1ed3eeec56254865b2b5256 177 SUPERFAMILY SSF50104 120 175 3.07E-15 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C3Y93_11110 cc91a408e1ed3eeec56254865b2b5256 177 SUPERFAMILY SSF82679 1 112 5.23E-38 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 C3Y93_11110 cc91a408e1ed3eeec56254865b2b5256 177 Pfam PF02357 Transcription termination factor nusG 2 107 5.5E-28 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 C3Y93_11110 cc91a408e1ed3eeec56254865b2b5256 177 SMART SM00739 122 149 0.0032 T 14-10-2018 IPR005824 KOW C3Y93_11110 cc91a408e1ed3eeec56254865b2b5256 177 Gene3D G3DSA:2.30.30.30 118 175 1.7E-19 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 C3Y93_05810 d5f5fd4e908845d485c34bcdff6efe0e 290 PIRSF PIRSF006278 5 289 1.3E-68 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase C3Y93_05810 d5f5fd4e908845d485c34bcdff6efe0e 290 Gene3D G3DSA:3.40.50.1100 8 284 4.7E-62 T 14-10-2018 C3Y93_05810 d5f5fd4e908845d485c34bcdff6efe0e 290 SUPERFAMILY SSF53686 5 285 1.44E-52 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C3Y93_05810 d5f5fd4e908845d485c34bcdff6efe0e 290 Gene3D G3DSA:3.40.50.1100 37 142 4.7E-62 T 14-10-2018 C3Y93_05810 d5f5fd4e908845d485c34bcdff6efe0e 290 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 281 1.9E-19 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C3Y93_10770 b652c16ae20a9a08ee863b26bcc7ed35 558 Gene3D G3DSA:3.30.300.310 461 558 5.8E-33 T 14-10-2018 C3Y93_10770 b652c16ae20a9a08ee863b26bcc7ed35 558 Gene3D G3DSA:3.40.50.12780 18 458 2.7E-116 T 14-10-2018 C3Y93_10770 b652c16ae20a9a08ee863b26bcc7ed35 558 SUPERFAMILY SSF56801 20 557 2.49E-152 T 14-10-2018 C3Y93_10770 b652c16ae20a9a08ee863b26bcc7ed35 558 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 14-10-2018 IPR020845 AMP-binding, conserved site C3Y93_10770 b652c16ae20a9a08ee863b26bcc7ed35 558 Pfam PF00501 AMP-binding enzyme 31 465 2.0E-110 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C3Y93_10770 b652c16ae20a9a08ee863b26bcc7ed35 558 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 548 4.2E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C3Y93_06155 d1edb2b86566df6c46db28d374ac5c16 305 Gene3D G3DSA:3.40.50.720 6 302 2.3E-70 T 14-10-2018 C3Y93_06155 d1edb2b86566df6c46db28d374ac5c16 305 Pfam PF08338 Domain of unknown function (DUF1731) 253 297 3.6E-18 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 C3Y93_06155 d1edb2b86566df6c46db28d374ac5c16 305 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 6 295 1.6E-86 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 C3Y93_06155 d1edb2b86566df6c46db28d374ac5c16 305 SUPERFAMILY SSF51735 6 297 1.97E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_06155 d1edb2b86566df6c46db28d374ac5c16 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 223 4.7E-24 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 C3Y93_09320 7d171e3514a9410df05cc3ae4cabbbb1 245 SUPERFAMILY SSF111364 25 245 6.28E-59 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 C3Y93_09320 7d171e3514a9410df05cc3ae4cabbbb1 245 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 49 230 4.5E-13 T 14-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 C3Y93_09320 7d171e3514a9410df05cc3ae4cabbbb1 245 Gene3D G3DSA:2.40.230.20 20 239 1.1E-20 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 C3Y93_01735 31210c2d6ea8e95724fe1c3789dca673 373 SUPERFAMILY SSF52096 13 342 1.09E-50 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_01735 31210c2d6ea8e95724fe1c3789dca673 373 Gene3D G3DSA:3.90.226.10 13 356 8.2E-88 T 14-10-2018 C3Y93_01735 31210c2d6ea8e95724fe1c3789dca673 373 Pfam PF16113 Enoyl-CoA hydratase/isomerase 24 342 3.4E-84 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 C3Y93_07440 894d6e8516585ef25baa2782f49ad795 238 Pfam PF11008 Protein of unknown function (DUF2846) 56 164 1.9E-25 T 14-10-2018 IPR022548 Domain of unknown function DUF2846 C3Y93_02745 8b68b0e817220e2b47654cdf8d683686 224 Pfam PF06912 Protein of unknown function (DUF1275) 14 208 8.4E-29 T 14-10-2018 IPR010699 Protein of unknown function DUF1275 C3Y93_13500 bc452f1600ab26bb6b99182c386f008e 301 Gene3D G3DSA:3.30.2010.10 74 165 8.0E-34 T 14-10-2018 C3Y93_13500 bc452f1600ab26bb6b99182c386f008e 301 Pfam PF01435 Peptidase family M48 81 298 7.4E-41 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 C3Y93_13500 bc452f1600ab26bb6b99182c386f008e 301 Hamap MF_00188 Protease HtpX [htpX]. 1 298 25.48 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 C3Y93_04225 743dce50cd7114b03fc1ffa913542956 341 Pfam PF01207 Dihydrouridine synthase (Dus) 13 315 3.8E-99 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3Y93_04225 743dce50cd7114b03fc1ffa913542956 341 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3Y93_04225 743dce50cd7114b03fc1ffa913542956 341 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 47.863 T 14-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 C3Y93_04225 743dce50cd7114b03fc1ffa913542956 341 PIRSF PIRSF006621 1 327 1.7E-102 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 C3Y93_04225 743dce50cd7114b03fc1ffa913542956 341 SUPERFAMILY SSF51395 10 318 2.93E-89 T 14-10-2018 C3Y93_04225 743dce50cd7114b03fc1ffa913542956 341 Gene3D G3DSA:3.20.20.70 6 249 2.8E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_04225 743dce50cd7114b03fc1ffa913542956 341 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 1.4E-118 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 C3Y93_04225 743dce50cd7114b03fc1ffa913542956 341 Gene3D G3DSA:1.10.1200.80 251 325 5.5E-14 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 C3Y93_01235 c1cb66247aacad06c3ba7f026ca67b1a 504 Gene3D G3DSA:1.20.1600.10 99 503 1.4E-60 T 14-10-2018 C3Y93_01235 c1cb66247aacad06c3ba7f026ca67b1a 504 Pfam PF02321 Outer membrane efflux protein 309 484 2.8E-18 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3Y93_01235 c1cb66247aacad06c3ba7f026ca67b1a 504 Pfam PF02321 Outer membrane efflux protein 100 279 2.2E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3Y93_01235 c1cb66247aacad06c3ba7f026ca67b1a 504 SUPERFAMILY SSF56954 91 485 4.97E-62 T 14-10-2018 C3Y93_08135 629dbb5aec762fb23a1da01fa916f145 171 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 9 116 3.2E-15 T 14-10-2018 IPR013362 Pilus modification type IV, PilV C3Y93_08135 629dbb5aec762fb23a1da01fa916f145 171 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 1.0E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_08135 629dbb5aec762fb23a1da01fa916f145 171 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 30 1.9E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_00815 2400c95251c2475a79c401b974e6baa0 191 Pfam PF00881 Nitroreductase family 13 168 7.5E-21 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 C3Y93_00815 2400c95251c2475a79c401b974e6baa0 191 SUPERFAMILY SSF55469 10 188 4.45E-30 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3Y93_00815 2400c95251c2475a79c401b974e6baa0 191 Gene3D G3DSA:3.40.109.10 9 189 1.8E-34 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3Y93_00815 2400c95251c2475a79c401b974e6baa0 191 PIRSF PIRSF000232 4 191 4.8E-62 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like C3Y93_11175 c9c97927c3e6170906ad3dfe695ba309 201 Gene3D G3DSA:2.40.160.20 14 201 6.5E-40 T 14-10-2018 C3Y93_11175 c9c97927c3e6170906ad3dfe695ba309 201 SUPERFAMILY SSF56925 19 201 1.18E-20 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel C3Y93_11175 c9c97927c3e6170906ad3dfe695ba309 201 Pfam PF03922 OmpW family 19 201 1.5E-36 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 C3Y93_06470 49102303443caef3b3b4a48c73aee82b 554 SUPERFAMILY SSF56935 30 553 2.14E-51 T 14-10-2018 C3Y93_06470 49102303443caef3b3b4a48c73aee82b 554 Gene3D G3DSA:2.40.160.60 114 554 7.5E-58 T 14-10-2018 C3Y93_06470 49102303443caef3b3b4a48c73aee82b 554 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 26 553 3.2E-70 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) C3Y93_04290 08e3aca1790f57191c19546994accfa0 488 Pfam PF01928 CYTH domain 1 176 2.4E-20 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 C3Y93_04290 08e3aca1790f57191c19546994accfa0 488 Gene3D G3DSA:2.40.320.10 1 198 1.3E-31 T 14-10-2018 C3Y93_04290 08e3aca1790f57191c19546994accfa0 488 SUPERFAMILY SSF55154 1 219 5.72E-32 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 C3Y93_04290 08e3aca1790f57191c19546994accfa0 488 SMART SM01118 1 205 3.4E-22 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 C3Y93_07315 447689949bf75527b0130f8c44d2c460 257 Gene3D G3DSA:3.40.50.720 3 256 4.8E-89 T 14-10-2018 C3Y93_07315 447689949bf75527b0130f8c44d2c460 257 Pfam PF00899 ThiF family 24 251 8.1E-36 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 C3Y93_07315 447689949bf75527b0130f8c44d2c460 257 SUPERFAMILY SSF69572 8 249 2.09E-57 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 C3Y93_02545 a8c4cb742b667588c4397d373c08c807 232 SMART SM00855 3 176 3.4E-12 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 C3Y93_02545 a8c4cb742b667588c4397d373c08c807 232 SUPERFAMILY SSF53254 1 222 1.15E-32 T 14-10-2018 IPR029033 Histidine phosphatase superfamily C3Y93_02545 a8c4cb742b667588c4397d373c08c807 232 PIRSF PIRSF000709 1 80 0.0023 T 14-10-2018 C3Y93_02545 a8c4cb742b667588c4397d373c08c807 232 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 217 3.5E-19 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 C3Y93_02545 a8c4cb742b667588c4397d373c08c807 232 Gene3D G3DSA:3.40.50.1240 1 228 3.2E-32 T 14-10-2018 IPR029033 Histidine phosphatase superfamily C3Y93_02150 24c47586f84708d0b01bb2ff887d1102 200 Gene3D G3DSA:1.10.10.690 50 200 8.6E-26 T 14-10-2018 IPR027405 YidB-like C3Y93_02150 24c47586f84708d0b01bb2ff887d1102 200 SUPERFAMILY SSF140804 53 198 1.31E-24 T 14-10-2018 IPR027405 YidB-like C3Y93_02150 24c47586f84708d0b01bb2ff887d1102 200 Pfam PF06078 Bacterial protein of unknown function (DUF937) 14 174 6.8E-20 T 14-10-2018 IPR009282 Protein of unknown function DUF937 C3Y93_02315 cd90353f7672c725eeb4269933ea6476 155 Gene3D G3DSA:3.90.960.10 1 154 1.4E-59 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 C3Y93_02315 cd90353f7672c725eeb4269933ea6476 155 SUPERFAMILY SSF55826 2 152 6.41E-44 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 C3Y93_02315 cd90353f7672c725eeb4269933ea6476 155 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 153 8.2E-59 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC C3Y93_02315 cd90353f7672c725eeb4269933ea6476 155 PIRSF PIRSF006181 1 155 3.1E-57 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC C3Y93_02315 cd90353f7672c725eeb4269933ea6476 155 Pfam PF04073 Aminoacyl-tRNA editing domain 32 143 2.9E-27 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 C3Y93_10880 9d3a93f397e2e139e9666de796a99748 387 SMART SM00245 178 365 5.8E-43 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 C3Y93_10880 9d3a93f397e2e139e9666de796a99748 387 Gene3D G3DSA:3.90.226.10 192 361 1.3E-70 T 14-10-2018 C3Y93_10880 9d3a93f397e2e139e9666de796a99748 387 Pfam PF03572 Peptidase family S41 203 362 1.4E-42 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 C3Y93_10880 9d3a93f397e2e139e9666de796a99748 387 Gene3D G3DSA:2.30.42.10 106 191 1.3E-70 T 14-10-2018 C3Y93_10880 9d3a93f397e2e139e9666de796a99748 387 Gene3D G3DSA:3.30.750.44 57 340 1.3E-70 T 14-10-2018 C3Y93_10880 9d3a93f397e2e139e9666de796a99748 387 SUPERFAMILY SSF52096 45 369 1.09E-60 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C3Y93_10880 9d3a93f397e2e139e9666de796a99748 387 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 59 371 7.1E-68 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 C3Y93_10880 9d3a93f397e2e139e9666de796a99748 387 SUPERFAMILY SSF50156 100 179 7.07E-7 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C3Y93_07395 1405a015108bef6d2e6f8d6004cdc631 127 SUPERFAMILY SSF48295 13 60 1.57E-11 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 C3Y93_07395 1405a015108bef6d2e6f8d6004cdc631 127 Pfam PF01527 Transposase 14 65 1.0E-10 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 C3Y93_03750 48c7860049edbbd7a2821653af305d30 303 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 2 283 1.1E-55 T 14-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 C3Y93_10545 69ff810ebb12da26637d5c0604b0785c 164 Gene3D G3DSA:1.10.10.10 16 105 7.0E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_10545 69ff810ebb12da26637d5c0604b0785c 164 Gene3D G3DSA:3.30.1490.190 106 164 1.6E-12 T 14-10-2018 C3Y93_10545 69ff810ebb12da26637d5c0604b0785c 164 Pfam PF01475 Ferric uptake regulator family 35 153 4.0E-10 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 C3Y93_10545 69ff810ebb12da26637d5c0604b0785c 164 SUPERFAMILY SSF46785 27 159 1.23E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_02595 94047477c3516c346a13edfbb9a52f58 116 Gene3D G3DSA:3.40.1260.10 1 115 1.0E-12 T 14-10-2018 IPR027396 DsrEFH-like C3Y93_02595 94047477c3516c346a13edfbb9a52f58 116 SUPERFAMILY SSF75169 2 116 1.81E-6 T 14-10-2018 IPR027396 DsrEFH-like C3Y93_11940 a8b545b1791734bac3ec314905e7f01f 433 Gene3D G3DSA:1.20.58.2200 370 432 1.1E-8 T 14-10-2018 IPR038440 FimV, C-terminal domain superfamily C3Y93_13380 af90923597ae8271eee889bed9141622 216 Pfam PF01728 FtsJ-like methyltransferase 35 210 7.2E-58 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 C3Y93_13380 af90923597ae8271eee889bed9141622 216 Gene3D G3DSA:3.40.50.150 31 216 3.2E-60 T 14-10-2018 C3Y93_13380 af90923597ae8271eee889bed9141622 216 SUPERFAMILY SSF53335 34 212 7.93E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_13380 af90923597ae8271eee889bed9141622 216 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 19 212 30.683 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 C3Y93_13380 af90923597ae8271eee889bed9141622 216 PIRSF PIRSF005461 3 216 4.2E-80 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 C3Y93_03230 b55e03d0b433eafbf809cf9ddb186c09 382 Pfam PF02253 Phospholipase A1 114 378 3.1E-102 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 C3Y93_03230 b55e03d0b433eafbf809cf9ddb186c09 382 Gene3D G3DSA:2.40.230.10 120 382 2.9E-86 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 C3Y93_03230 b55e03d0b433eafbf809cf9ddb186c09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 329 346 1.0E-34 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 C3Y93_03230 b55e03d0b433eafbf809cf9ddb186c09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 213 232 1.0E-34 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 C3Y93_03230 b55e03d0b433eafbf809cf9ddb186c09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 258 276 1.0E-34 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 C3Y93_03230 b55e03d0b433eafbf809cf9ddb186c09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 190 206 1.0E-34 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 C3Y93_03230 b55e03d0b433eafbf809cf9ddb186c09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 243 257 1.0E-34 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 C3Y93_03230 b55e03d0b433eafbf809cf9ddb186c09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 293 311 1.0E-34 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 C3Y93_03230 b55e03d0b433eafbf809cf9ddb186c09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 168 185 1.0E-34 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 C3Y93_03230 b55e03d0b433eafbf809cf9ddb186c09 382 PRINTS PR01486 Bacterial phospholipase A1 protein signature 351 371 1.0E-34 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 C3Y93_03230 b55e03d0b433eafbf809cf9ddb186c09 382 SUPERFAMILY SSF56931 115 382 3.01E-89 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 C3Y93_08220 7622ecbe30e1834a7e1d697a96907516 177 SUPERFAMILY SSF54523 8 172 3.61E-21 T 14-10-2018 C3Y93_08220 7622ecbe30e1834a7e1d697a96907516 177 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 27 1.0E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_08220 7622ecbe30e1834a7e1d697a96907516 177 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_08220 7622ecbe30e1834a7e1d697a96907516 177 Gene3D G3DSA:3.30.700.10 8 177 2.0E-30 T 14-10-2018 C3Y93_08220 7622ecbe30e1834a7e1d697a96907516 177 Pfam PF00114 Pilin (bacterial filament) 37 173 2.8E-13 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 C3Y93_08220 7622ecbe30e1834a7e1d697a96907516 177 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 2.4E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_08085 045e99d56963d020a2751e148ea11bef 322 Gene3D G3DSA:3.40.50.1820 34 322 3.3E-84 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_08085 045e99d56963d020a2751e148ea11bef 322 SUPERFAMILY SSF53474 37 316 6.33E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_08085 045e99d56963d020a2751e148ea11bef 322 Pfam PF00561 alpha/beta hydrolase fold 42 267 4.8E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_00175 c60e96c391aa1b8a887404ff707fb226 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 266 6.0E-96 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 C3Y93_00175 c60e96c391aa1b8a887404ff707fb226 277 Gene3D G3DSA:1.10.3720.10 13 272 2.0E-68 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_00175 c60e96c391aa1b8a887404ff707fb226 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 7 270 4.0E-127 T 14-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 C3Y93_00175 c60e96c391aa1b8a887404ff707fb226 277 SUPERFAMILY SSF161098 14 264 2.62E-55 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_00175 c60e96c391aa1b8a887404ff707fb226 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 272 3.4E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3Y93_04310 50695348979af382a36893166394cbec 353 Pfam PF04909 Amidohydrolase 138 353 2.8E-20 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C3Y93_04310 50695348979af382a36893166394cbec 353 Gene3D G3DSA:3.20.20.140 5 353 2.3E-67 T 14-10-2018 C3Y93_04310 50695348979af382a36893166394cbec 353 SUPERFAMILY SSF51556 8 353 1.44E-32 T 14-10-2018 IPR032466 Metal-dependent hydrolase C3Y93_08110 f51465803a64ce212567157bada14048 152 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 1.0E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_08110 f51465803a64ce212567157bada14048 152 SUPERFAMILY SSF54523 7 137 1.73E-22 T 14-10-2018 C3Y93_08110 f51465803a64ce212567157bada14048 152 Gene3D G3DSA:3.30.700.10 7 148 1.0E-24 T 14-10-2018 C3Y93_08110 f51465803a64ce212567157bada14048 152 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 28 120 1.9E-14 T 14-10-2018 IPR031982 Type IV minor pilin ComP C3Y93_08110 f51465803a64ce212567157bada14048 152 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 2.3E-12 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C3Y93_08110 f51465803a64ce212567157bada14048 152 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 2.3E-12 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C3Y93_08110 f51465803a64ce212567157bada14048 152 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_08110 f51465803a64ce212567157bada14048 152 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 9.7E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C3Y93_06840 9dd6449a48c91df563d67e0f4ceecb6c 183 Gene3D G3DSA:1.20.144.10 64 179 1.4E-18 T 14-10-2018 C3Y93_06840 9dd6449a48c91df563d67e0f4ceecb6c 183 Pfam PF01569 PAP2 superfamily 70 177 1.3E-20 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase C3Y93_06840 9dd6449a48c91df563d67e0f4ceecb6c 183 SUPERFAMILY SSF48317 7 174 6.28E-37 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily C3Y93_06840 9dd6449a48c91df563d67e0f4ceecb6c 183 SMART SM00014 63 173 3.4E-15 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase C3Y93_06975 12fd07257edf727960d490aa6a304785 156 Gene3D G3DSA:3.10.450.160 88 156 2.6E-7 T 14-10-2018 C3Y93_06975 12fd07257edf727960d490aa6a304785 156 Pfam PF11776 Nickel/cobalt transporter regulator 123 155 5.8E-8 T 14-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB C3Y93_06975 12fd07257edf727960d490aa6a304785 156 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 107 154 0.001 T 14-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB C3Y93_09270 dd7dd9d096680119acc857575426378f 272 SUPERFAMILY SSF56219 14 271 1.31E-70 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C3Y93_09270 dd7dd9d096680119acc857575426378f 272 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 18 263 3.2E-19 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase C3Y93_09270 dd7dd9d096680119acc857575426378f 272 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 14 268 4.5E-66 T 14-10-2018 C3Y93_09270 dd7dd9d096680119acc857575426378f 272 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 14 270 1.1E-69 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 C3Y93_09270 dd7dd9d096680119acc857575426378f 272 Gene3D G3DSA:3.60.10.10 12 272 4.3E-80 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C3Y93_03325 52e74ecc6b102f9fabd1aee6069eebd3 82 Gene3D G3DSA:2.10.260.10 1 81 3.8E-14 T 14-10-2018 C3Y93_03325 52e74ecc6b102f9fabd1aee6069eebd3 82 SMART SM00966 7 52 3.6E-5 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C3Y93_03325 52e74ecc6b102f9fabd1aee6069eebd3 82 SUPERFAMILY SSF89447 3 62 4.71E-11 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily C3Y93_11205 a8bdcf16f2348118552eb4a91b6f7d18 66 Pfam PF07311 Dodecin 3 66 6.3E-23 T 14-10-2018 IPR009923 Dodecin C3Y93_11205 a8bdcf16f2348118552eb4a91b6f7d18 66 Gene3D G3DSA:3.30.1660.10 1 66 6.9E-19 T 14-10-2018 IPR025543 Dodecin-like C3Y93_11205 a8bdcf16f2348118552eb4a91b6f7d18 66 SUPERFAMILY SSF89807 2 66 3.92E-20 T 14-10-2018 IPR036694 Dodecin-like superfamily C3Y93_09805 021786d5c2744bfa9df260be199fd17f 88 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 5.0E-22 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 C3Y93_09805 021786d5c2744bfa9df260be199fd17f 88 Gene3D G3DSA:1.20.58.1000 3 88 4.5E-24 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily C3Y93_07610 20702b58877bcf0bdab3f522671bcdc4 71 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 49 2.7E-17 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 C3Y93_07610 20702b58877bcf0bdab3f522671bcdc4 71 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 49 5.4E-18 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 C3Y93_09605 c3517751fa4d3e4f0bf6ba8b3882323b 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 58 1.2E-4 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C3Y93_09605 c3517751fa4d3e4f0bf6ba8b3882323b 218 Gene3D G3DSA:1.10.357.10 53 217 4.0E-35 T 14-10-2018 C3Y93_09605 c3517751fa4d3e4f0bf6ba8b3882323b 218 SUPERFAMILY SSF46689 2 75 6.16E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_09605 c3517751fa4d3e4f0bf6ba8b3882323b 218 Gene3D G3DSA:1.10.10.60 1 52 8.6E-22 T 14-10-2018 C3Y93_07845 c9bdca3e151b7878b6171d4012226739 854 SUPERFAMILY SSF69593 259 494 4.18E-26 T 14-10-2018 C3Y93_07845 c9bdca3e151b7878b6171d4012226739 854 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 16 820 8.8E-299 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 C3Y93_07845 c9bdca3e151b7878b6171d4012226739 854 PIRSF PIRSF500064 10 835 1.3E-227 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 C3Y93_07845 c9bdca3e151b7878b6171d4012226739 854 PIRSF PIRSF000437 29 837 3.9E-224 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 C3Y93_07845 c9bdca3e151b7878b6171d4012226739 854 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 15 829 23.413 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 C3Y93_07845 c9bdca3e151b7878b6171d4012226739 854 SMART SM00563 314 441 3.7E-22 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3Y93_07845 c9bdca3e151b7878b6171d4012226739 854 Pfam PF01553 Acyltransferase 297 437 4.1E-20 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3Y93_00790 6899487a4cc849e2ea718f93199ac400 85 Gene3D G3DSA:3.30.110.40 4 79 5.7E-12 T 14-10-2018 IPR036868 TusA-like domain superfamily C3Y93_00790 6899487a4cc849e2ea718f93199ac400 85 SUPERFAMILY SSF64307 7 76 8.37E-15 T 14-10-2018 IPR036868 TusA-like domain superfamily C3Y93_00790 6899487a4cc849e2ea718f93199ac400 85 Pfam PF01206 Sulfurtransferase TusA 10 76 1.1E-14 T 14-10-2018 IPR001455 TusA-like domain C3Y93_12160 fd223a539b36ca2e61ed7827ebd39ace 85 Gene3D G3DSA:1.10.10.1130 2 79 5.0E-25 T 14-10-2018 C3Y93_12160 fd223a539b36ca2e61ed7827ebd39ace 85 Pfam PF10982 Protein of unknown function (DUF2789) 5 75 9.7E-25 T 14-10-2018 IPR021250 Protein of unknown function DUF2789 C3Y93_02525 de1a1edf5c0cbcba5d07cb248c8ebb7f 196 Gene3D G3DSA:3.40.470.10 6 194 1.1E-20 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3Y93_02525 de1a1edf5c0cbcba5d07cb248c8ebb7f 196 SUPERFAMILY SSF52141 10 191 4.58E-18 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C3Y93_09745 b5f07010a1d488065847d1c48b5cd619 120 SUPERFAMILY SSF54427 1 112 7.46E-5 T 14-10-2018 IPR032710 NTF2-like domain superfamily C3Y93_10455 3f73b7422bc5f5d41766a36f11fd5788 361 Pfam PF04332 Protein of unknown function (DUF475) 54 356 4.9E-114 T 14-10-2018 IPR007427 Protein of unknown function DUF475 C3Y93_04625 928ec97f4244cbd362e0f71ab1f89f51 909 TIGRFAM TIGR02687 TIGR02687: TIGR02687 family protein 14 896 1.5E-201 T 14-10-2018 IPR014060 Conserved hypothetical protein CHP02687 C3Y93_04625 928ec97f4244cbd362e0f71ab1f89f51 909 Pfam PF08665 PglZ domain 522 700 1.3E-47 T 14-10-2018 IPR013973 PglZ domain C3Y93_13515 a0bfce7732d5ccfe125f3f9427dc8114 127 Pfam PF02036 SCP-2 sterol transfer family 34 108 7.4E-8 T 14-10-2018 IPR003033 SCP2 sterol-binding domain C3Y93_13515 a0bfce7732d5ccfe125f3f9427dc8114 127 Gene3D G3DSA:3.30.1050.10 8 111 6.4E-13 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily C3Y93_13515 a0bfce7732d5ccfe125f3f9427dc8114 127 SUPERFAMILY SSF55718 5 108 8.95E-12 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily C3Y93_05200 ec1bd39aa263e80d5b8b806fb24bdba0 615 Gene3D G3DSA:3.10.105.10 318 579 4.1E-222 T 14-10-2018 C3Y93_05200 ec1bd39aa263e80d5b8b806fb24bdba0 615 Gene3D G3DSA:3.40.190.10 35 599 4.1E-222 T 14-10-2018 C3Y93_05200 ec1bd39aa263e80d5b8b806fb24bdba0 615 SUPERFAMILY SSF53850 56 600 1.03E-105 T 14-10-2018 C3Y93_05200 ec1bd39aa263e80d5b8b806fb24bdba0 615 PIRSF PIRSF002741 24 604 2.6E-91 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 C3Y93_05200 ec1bd39aa263e80d5b8b806fb24bdba0 615 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 104 516 2.7E-67 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain C3Y93_11295 8a7f2afe0c4f3bd5fd1cf9fff2e41e55 133 Pfam PF07233 Protein of unknown function (DUF1425) 43 131 2.3E-20 T 14-10-2018 IPR010824 Protein of unknown function DUF1425 C3Y93_11295 8a7f2afe0c4f3bd5fd1cf9fff2e41e55 133 Gene3D G3DSA:2.60.40.3230 23 133 9.0E-22 T 14-10-2018 IPR038483 YcfL-like superfamily C3Y93_00200 76821236bea68f2fec602935b7046c02 202 SUPERFAMILY SSF52540 1 197 2.44E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00200 76821236bea68f2fec602935b7046c02 202 Gene3D G3DSA:3.40.50.300 1 201 2.0E-63 T 14-10-2018 C3Y93_00200 76821236bea68f2fec602935b7046c02 202 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 190 2.3E-52 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 C3Y93_00200 76821236bea68f2fec602935b7046c02 202 Pfam PF02223 Thymidylate kinase 5 192 2.1E-50 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 C3Y93_00200 76821236bea68f2fec602935b7046c02 202 Hamap MF_00165 Thymidylate kinase [tmk]. 1 202 28.663 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 C3Y93_05570 2278f0c5f2656f494ea515bb2a058a5d 173 Gene3D G3DSA:3.10.129.10 10 161 2.1E-57 T 14-10-2018 C3Y93_05570 2278f0c5f2656f494ea515bb2a058a5d 173 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 9 102 7.1E-10 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 C3Y93_05570 2278f0c5f2656f494ea515bb2a058a5d 173 SUPERFAMILY SSF54637 10 158 3.05E-45 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_05570 2278f0c5f2656f494ea515bb2a058a5d 173 Pfam PF03061 Thioesterase superfamily 32 103 8.0E-19 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 C3Y93_04915 dc96b7b09056b163fbc5932feab67ea2 311 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C3Y93_04915 dc96b7b09056b163fbc5932feab67ea2 311 Gene3D G3DSA:3.40.50.300 1 236 4.3E-65 T 14-10-2018 C3Y93_04915 dc96b7b09056b163fbc5932feab67ea2 311 Pfam PF00005 ABC transporter 21 165 4.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C3Y93_04915 dc96b7b09056b163fbc5932feab67ea2 311 SMART SM00382 30 213 5.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C3Y93_04915 dc96b7b09056b163fbc5932feab67ea2 311 SUPERFAMILY SSF52540 4 228 6.29E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_00285 fa4d1807f90ed962136dc166ef658376 275 SUPERFAMILY SSF103481 178 272 3.27E-11 T 14-10-2018 C3Y93_00285 fa4d1807f90ed962136dc166ef658376 275 SUPERFAMILY SSF103481 38 133 6.54E-8 T 14-10-2018 C3Y93_00285 fa4d1807f90ed962136dc166ef658376 275 Pfam PF00892 EamA-like transporter family 140 269 6.8E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_00285 fa4d1807f90ed962136dc166ef658376 275 Pfam PF00892 EamA-like transporter family 2 129 4.1E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_07325 b46a63d79bd62e140bba18f1cffb62b7 338 Gene3D G3DSA:3.90.640.20 221 315 4.8E-25 T 14-10-2018 IPR037126 PdaC/RsiV-like superfamily C3Y93_07325 b46a63d79bd62e140bba18f1cffb62b7 338 Pfam PF11738 Protein of unknown function (DUF3298) 232 301 1.7E-8 T 14-10-2018 IPR021729 Domain of unknown function DUF3298 C3Y93_05010 a2dd0638b98ba30664e2698646f3cc88 212 Pfam PF12158 Protein of unknown function (DUF3592) 4 130 1.8E-6 T 14-10-2018 IPR021994 Protein of unknown function DUF3592 C3Y93_01535 17faaaa3dcd8c598d9724d2c254d0641 503 Pfam PF00171 Aldehyde dehydrogenase family 27 490 1.9E-165 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C3Y93_01535 17faaaa3dcd8c598d9724d2c254d0641 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 C3Y93_01535 17faaaa3dcd8c598d9724d2c254d0641 503 Gene3D G3DSA:3.40.605.10 23 489 1.5E-164 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C3Y93_01535 17faaaa3dcd8c598d9724d2c254d0641 503 SUPERFAMILY SSF53720 14 495 1.11E-163 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C3Y93_01535 17faaaa3dcd8c598d9724d2c254d0641 503 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 C3Y93_01535 17faaaa3dcd8c598d9724d2c254d0641 503 Gene3D G3DSA:3.40.309.10 266 461 1.5E-164 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C3Y93_04340 14cb2ad66c4e301fc392586903a8564e 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 7 137 2.1E-15 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain C3Y93_04340 14cb2ad66c4e301fc392586903a8564e 160 Gene3D G3DSA:2.40.10.330 71 121 3.5E-57 T 14-10-2018 C3Y93_04340 14cb2ad66c4e301fc392586903a8564e 160 SUPERFAMILY SSF54534 4 140 3.54E-38 T 14-10-2018 C3Y93_04340 14cb2ad66c4e301fc392586903a8564e 160 Gene3D G3DSA:3.10.50.40 4 154 3.5E-57 T 14-10-2018 C3Y93_00430 4bc9bbc1f1faf9ea28594ab3ed7e2f81 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 5.2E-8 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_00430 4bc9bbc1f1faf9ea28594ab3ed7e2f81 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 47 6.5E-4 T 14-10-2018 IPR001451 Hexapeptide repeat C3Y93_00430 4bc9bbc1f1faf9ea28594ab3ed7e2f81 176 Gene3D G3DSA:2.160.10.10 1 176 5.6E-55 T 14-10-2018 C3Y93_00430 4bc9bbc1f1faf9ea28594ab3ed7e2f81 176 SUPERFAMILY SSF51161 5 173 9.15E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C3Y93_03340 5a1cd8a773d33d36895bccd83a6be9c8 391 SUPERFAMILY SSF53756 7 319 4.32E-27 T 14-10-2018 C3Y93_03340 5a1cd8a773d33d36895bccd83a6be9c8 391 Pfam PF02684 Lipid-A-disaccharide synthetase 8 379 6.0E-108 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 C3Y93_03340 5a1cd8a773d33d36895bccd83a6be9c8 391 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 387 4.2E-105 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 C3Y93_03340 5a1cd8a773d33d36895bccd83a6be9c8 391 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 390 36.786 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 C3Y93_05550 22fe965746df44bb0bf7e546593839f4 113 SUPERFAMILY SSF54534 4 110 2.16E-40 T 14-10-2018 C3Y93_05550 22fe965746df44bb0bf7e546593839f4 113 Gene3D G3DSA:3.10.50.40 1 113 3.9E-43 T 14-10-2018 C3Y93_05550 22fe965746df44bb0bf7e546593839f4 113 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 16 105 8.4E-33 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain C3Y93_04670 bd0b004cc13dac266dc5affd59a3377a 354 Gene3D G3DSA:3.90.320.10 44 250 2.5E-38 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal C3Y93_04670 bd0b004cc13dac266dc5affd59a3377a 354 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 44 198 1.4E-38 T 14-10-2018 IPR017482 Putative phage-type endonuclease C3Y93_04670 bd0b004cc13dac266dc5affd59a3377a 354 Pfam PF09588 YqaJ-like viral recombinase domain 47 189 3.9E-35 T 14-10-2018 IPR019080 YqaJ viral recombinase C3Y93_04670 bd0b004cc13dac266dc5affd59a3377a 354 SUPERFAMILY SSF52980 43 231 1.13E-33 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C3Y93_07910 41548cbf02347ebea6d7ccc99dcc9e08 276 SUPERFAMILY SSF56655 1 272 1.31E-75 T 14-10-2018 C3Y93_07910 41548cbf02347ebea6d7ccc99dcc9e08 276 Gene3D G3DSA:3.30.540.10 1 144 2.0E-45 T 14-10-2018 C3Y93_07910 41548cbf02347ebea6d7ccc99dcc9e08 276 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 221 235 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 C3Y93_07910 41548cbf02347ebea6d7ccc99dcc9e08 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 5.9E-50 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3Y93_07910 41548cbf02347ebea6d7ccc99dcc9e08 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 5.9E-50 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3Y93_07910 41548cbf02347ebea6d7ccc99dcc9e08 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 5.9E-50 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3Y93_07910 41548cbf02347ebea6d7ccc99dcc9e08 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 218 242 5.9E-50 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3Y93_07910 41548cbf02347ebea6d7ccc99dcc9e08 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 134 157 5.9E-50 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3Y93_07910 41548cbf02347ebea6d7ccc99dcc9e08 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 187 208 5.9E-50 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3Y93_07910 41548cbf02347ebea6d7ccc99dcc9e08 276 Gene3D G3DSA:3.40.190.80 145 271 5.5E-32 T 14-10-2018 C3Y93_07910 41548cbf02347ebea6d7ccc99dcc9e08 276 Pfam PF00459 Inositol monophosphatase family 2 264 4.8E-68 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C3Y93_07910 41548cbf02347ebea6d7ccc99dcc9e08 276 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site C3Y93_04115 3bdee7358cb9436a69e515ee57d8ba7f 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 2.6E-19 T 14-10-2018 IPR022569 Ferredoxin, C-terminal C3Y93_04115 3bdee7358cb9436a69e515ee57d8ba7f 107 Gene3D G3DSA:3.30.70.20 2 101 1.3E-32 T 14-10-2018 C3Y93_04115 3bdee7358cb9436a69e515ee57d8ba7f 107 SUPERFAMILY SSF54862 3 103 3.94E-25 T 14-10-2018 C3Y93_04115 3bdee7358cb9436a69e515ee57d8ba7f 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 4.5E-18 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 C3Y93_04115 3bdee7358cb9436a69e515ee57d8ba7f 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 4.5E-18 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 C3Y93_04115 3bdee7358cb9436a69e515ee57d8ba7f 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 4.5E-18 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 C3Y93_04115 3bdee7358cb9436a69e515ee57d8ba7f 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C3Y93_04115 3bdee7358cb9436a69e515ee57d8ba7f 107 Pfam PF00037 4Fe-4S binding domain 34 55 5.6E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C3Y93_04775 e02f245bfafc750ae9adf9ec4f3c146e 691 SUPERFAMILY SSF51055 180 224 2.35E-5 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 C3Y93_04775 e02f245bfafc750ae9adf9ec4f3c146e 691 Gene3D G3DSA:2.10.10.20 181 224 3.7E-5 T 14-10-2018 C3Y93_05575 24510286cf5414d0dd40e0876521a2f8 336 SUPERFAMILY SSF52151 36 307 4.45E-53 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase C3Y93_05575 24510286cf5414d0dd40e0876521a2f8 336 Gene3D G3DSA:3.40.1090.10 150 285 5.7E-19 T 14-10-2018 C3Y93_05575 24510286cf5414d0dd40e0876521a2f8 336 Gene3D G3DSA:3.40.1090.10 42 149 4.1E-29 T 14-10-2018 C3Y93_05575 24510286cf5414d0dd40e0876521a2f8 336 Pfam PF01734 Patatin-like phospholipase 62 219 8.2E-25 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 C3Y93_00485 448d44221de21d1f406e9fc1d8bfeb48 136 Gene3D G3DSA:3.10.180.10 3 136 3.5E-51 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3Y93_00485 448d44221de21d1f406e9fc1d8bfeb48 136 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 133 4.7E-68 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 C3Y93_00485 448d44221de21d1f406e9fc1d8bfeb48 136 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 C3Y93_00485 448d44221de21d1f406e9fc1d8bfeb48 136 SUPERFAMILY SSF54593 1 129 6.44E-38 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C3Y93_00485 448d44221de21d1f406e9fc1d8bfeb48 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 126 6.1E-24 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain C3Y93_00485 448d44221de21d1f406e9fc1d8bfeb48 136 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 C3Y93_08675 117fe8cbf35fbddfd5436e0c905d2480 163 Gene3D G3DSA:3.10.450.50 6 163 7.6E-42 T 14-10-2018 C3Y93_08675 117fe8cbf35fbddfd5436e0c905d2480 163 Pfam PF00866 Ring hydroxylating beta subunit 16 155 8.8E-45 T 14-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 C3Y93_08675 117fe8cbf35fbddfd5436e0c905d2480 163 SUPERFAMILY SSF54427 2 162 2.2E-45 T 14-10-2018 IPR032710 NTF2-like domain superfamily C3Y93_08675 117fe8cbf35fbddfd5436e0c905d2480 163 TIGRFAM TIGR03231 anthran_1_2_B: anthranilate 1,2-dioxygenase, small subunit 9 163 1.4E-87 T 14-10-2018 IPR017640 Anthranilate 1,2-dioxygenase, small subunit GO:0019439 KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079 C3Y93_13325 2946563d2c1c96a2c9448960d527b8e0 301 Pfam PF04228 Putative neutral zinc metallopeptidase 1 297 7.5E-109 T 14-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative C3Y93_00345 3b06f6c2c2f2dff8640e088770177fd6 234 Gene3D G3DSA:3.30.110.170 34 227 2.2E-17 T 14-10-2018 C3Y93_00345 3b06f6c2c2f2dff8640e088770177fd6 234 Gene3D G3DSA:3.30.70.2970 44 146 2.2E-17 T 14-10-2018 C3Y93_00345 3b06f6c2c2f2dff8640e088770177fd6 234 Pfam PF04402 Protein of unknown function (DUF541) 32 230 8.1E-24 T 14-10-2018 IPR007497 Protein of unknown function DUF541 C3Y93_11405 941cd1b509045e70cef6a0e90a2773d1 91 PIRSF PIRSF028784 1 91 2.6E-27 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 C3Y93_11405 941cd1b509045e70cef6a0e90a2773d1 91 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 84 3.8E-17 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 C3Y93_04630 0c409674cd8bf04dedcb97ee4e196faf 1236 SUPERFAMILY SSF53335 74 688 1.36E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_06210 9a469411b9909a8b9ecd4935869d3a07 361 SUPERFAMILY SSF161070 40 357 4.32E-9 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 C3Y93_02235 5f535d981778576a173b3791496cf230 77 Gene3D G3DSA:1.25.40.10 4 77 1.5E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_02235 5f535d981778576a173b3791496cf230 77 SUPERFAMILY SSF81901 18 73 9.42E-9 T 14-10-2018 C3Y93_13095 e255bb86c865f82499e30cff53ce9775 174 Gene3D G3DSA:1.20.120.740 7 164 4.5E-7 T 14-10-2018 C3Y93_13095 e255bb86c865f82499e30cff53ce9775 174 SUPERFAMILY SSF101327 4 172 4.71E-25 T 14-10-2018 IPR036255 YgfB-like superfamily C3Y93_13095 e255bb86c865f82499e30cff53ce9775 174 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 6 169 5.9E-21 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 C3Y93_13095 e255bb86c865f82499e30cff53ce9775 174 Pfam PF03695 Uncharacterised protein family (UPF0149) 10 170 1.5E-20 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 C3Y93_03065 ffe06b99c247ca282c040db2bae8f21c 288 Pfam PF13479 AAA domain 16 196 5.7E-22 T 14-10-2018 C3Y93_03065 ffe06b99c247ca282c040db2bae8f21c 288 Gene3D G3DSA:3.40.50.300 20 103 1.2E-6 T 14-10-2018 C3Y93_03065 ffe06b99c247ca282c040db2bae8f21c 288 SUPERFAMILY SSF52540 21 99 2.76E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_04495 02e532da6d84613ee177830c7ad81d41 460 Pfam PF01136 Peptidase family U32 79 344 2.5E-96 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 C3Y93_04495 02e532da6d84613ee177830c7ad81d41 460 Pfam PF16325 Peptidase family U32 C-terminal domain 361 441 4.0E-21 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal C3Y93_04495 02e532da6d84613ee177830c7ad81d41 460 ProSitePatterns PS01276 Peptidase family U32 signature. 165 183 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 C3Y93_04495 02e532da6d84613ee177830c7ad81d41 460 Gene3D G3DSA:2.40.30.10 358 442 8.8E-11 T 14-10-2018 C3Y93_01930 9f42dcb27ff53148a714606b32a1e03c 166 SUPERFAMILY SSF111384 21 163 3.14E-23 T 14-10-2018 C3Y93_01930 9f42dcb27ff53148a714606b32a1e03c 166 Pfam PF03938 Outer membrane protein (OmpH-like) 9 161 6.8E-22 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 C3Y93_01930 9f42dcb27ff53148a714606b32a1e03c 166 Gene3D G3DSA:3.30.910.20 14 166 1.4E-23 T 14-10-2018 IPR024930 Skp domain superfamily C3Y93_01930 9f42dcb27ff53148a714606b32a1e03c 166 SMART SM00935 10 163 3.3E-28 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 C3Y93_06035 d4c187141074afbc6e592abf3216ac67 201 SUPERFAMILY SSF55166 23 169 1.8E-14 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 C3Y93_12505 43800138a8202307a7af854b66935a31 148 Gene3D G3DSA:2.40.128.520 21 148 1.4E-18 T 14-10-2018 C3Y93_12505 43800138a8202307a7af854b66935a31 148 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 26 146 4.4E-26 T 14-10-2018 IPR019223 Domain of unknown function DUF2147 C3Y93_10105 422af9e9c4ed2e2b1a41fee2e551af9c 441 Pfam PF13384 Homeodomain-like domain 3 51 8.3E-10 T 14-10-2018 C3Y93_10105 422af9e9c4ed2e2b1a41fee2e551af9c 441 Gene3D G3DSA:3.30.420.10 129 315 1.8E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_10105 422af9e9c4ed2e2b1a41fee2e551af9c 441 SUPERFAMILY SSF46689 8 111 6.81E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_10105 422af9e9c4ed2e2b1a41fee2e551af9c 441 SUPERFAMILY SSF53098 132 286 3.49E-17 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_08470 587510938fbb8569b52d1513a2ca3ddc 209 Pfam PF06961 Protein of unknown function (DUF1294) 128 182 8.7E-22 T 14-10-2018 IPR010718 Protein of unknown function DUF1294 C3Y93_08470 587510938fbb8569b52d1513a2ca3ddc 209 Gene3D G3DSA:2.40.50.140 2 78 2.7E-11 T 14-10-2018 C3Y93_08470 587510938fbb8569b52d1513a2ca3ddc 209 SUPERFAMILY SSF50249 8 70 1.13E-10 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C3Y93_08470 587510938fbb8569b52d1513a2ca3ddc 209 Pfam PF00313 'Cold-shock' DNA-binding domain 8 58 1.9E-8 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C3Y93_07145 7a7e3d5e86dce52c6557e739cf7f8557 444 Gene3D G3DSA:2.40.30.170 218 313 2.3E-29 T 14-10-2018 C3Y93_07145 7a7e3d5e86dce52c6557e739cf7f8557 444 Gene3D G3DSA:1.10.287.470 94 185 4.3E-18 T 14-10-2018 C3Y93_07145 7a7e3d5e86dce52c6557e739cf7f8557 444 SUPERFAMILY SSF111369 52 263 7.72E-24 T 14-10-2018 C3Y93_07145 7a7e3d5e86dce52c6557e739cf7f8557 444 Gene3D G3DSA:2.40.420.20 357 424 1.2E-6 T 14-10-2018 C3Y93_07145 7a7e3d5e86dce52c6557e739cf7f8557 444 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 327 3.0E-40 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C3Y93_07145 7a7e3d5e86dce52c6557e739cf7f8557 444 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 264 1.2E-12 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C3Y93_03485 ca371baabd0527c06fa4fe2e60c32d74 264 SUPERFAMILY SSF51621 4 258 2.62E-78 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C3Y93_03485 ca371baabd0527c06fa4fe2e60c32d74 264 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 5 252 2.8E-116 T 14-10-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 C3Y93_03485 ca371baabd0527c06fa4fe2e60c32d74 264 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 16 241 7.6E-62 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 C3Y93_03485 ca371baabd0527c06fa4fe2e60c32d74 264 Gene3D G3DSA:3.20.20.60 2 263 9.5E-85 T 14-10-2018 C3Y93_10225 046710258cda64574bf7eebe3bd6142c 355 Pfam PF00534 Glycosyl transferases group 1 159 330 4.0E-27 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C3Y93_10225 046710258cda64574bf7eebe3bd6142c 355 SUPERFAMILY SSF53756 6 351 1.26E-44 T 14-10-2018 C3Y93_10225 046710258cda64574bf7eebe3bd6142c 355 Gene3D G3DSA:3.40.50.2000 167 337 4.1E-26 T 14-10-2018 C3Y93_10225 046710258cda64574bf7eebe3bd6142c 355 Gene3D G3DSA:3.40.50.2000 1 166 3.5E-6 T 14-10-2018 C3Y93_03765 ba7301c9566c80aa47da21fe04a65c03 141 Pfam PF05433 Glycine zipper 2TM domain 80 120 1.0E-5 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 C3Y93_13960 192e50423f022d5f6ef2fb739963fed2 493 SUPERFAMILY SSF56954 8 475 6.93E-53 T 14-10-2018 C3Y93_13960 192e50423f022d5f6ef2fb739963fed2 493 Pfam PF02321 Outer membrane efflux protein 33 277 1.2E-16 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3Y93_13960 192e50423f022d5f6ef2fb739963fed2 493 Pfam PF02321 Outer membrane efflux protein 299 472 7.6E-16 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3Y93_01825 16322074dcefd3eb4bfe451e3f92b0d2 154 SUPERFAMILY SSF46785 15 152 2.55E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_01825 16322074dcefd3eb4bfe451e3f92b0d2 154 Gene3D G3DSA:1.10.10.10 2 153 2.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_01825 16322074dcefd3eb4bfe451e3f92b0d2 154 SMART SM00347 38 138 1.0E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C3Y93_01825 16322074dcefd3eb4bfe451e3f92b0d2 154 Pfam PF12802 MarR family 43 101 2.5E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C3Y93_08625 6779c82e2da7bf7bf98a841c308d28d1 424 Pfam PF14072 DNA-sulfur modification-associated 8 214 1.3E-11 T 14-10-2018 IPR017642 DNA sulphur modification protein DndB C3Y93_08625 6779c82e2da7bf7bf98a841c308d28d1 424 TIGRFAM TIGR04172 DGQHR_dnd_1: DNA phosphorothioation-associated DGQHR protein 1 7 419 4.4E-139 T 14-10-2018 IPR026440 DNA phosphorothioation-associated DGQHR protein 1 C3Y93_08625 6779c82e2da7bf7bf98a841c308d28d1 424 TIGRFAM TIGR03187 DGQHR: DGQHR domain 9 369 1.2E-50 T 14-10-2018 IPR017601 DGQHR-containing domain C3Y93_10385 edb9d656e63b3d49cf62357fe53de2d0 215 Gene3D G3DSA:3.40.30.10 1 83 3.3E-32 T 14-10-2018 C3Y93_10385 edb9d656e63b3d49cf62357fe53de2d0 215 Pfam PF14497 Glutathione S-transferase, C-terminal domain 136 204 8.1E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal C3Y93_10385 edb9d656e63b3d49cf62357fe53de2d0 215 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 73 3.1E-17 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C3Y93_10385 edb9d656e63b3d49cf62357fe53de2d0 215 SUPERFAMILY SSF52833 1 79 1.6E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_10385 edb9d656e63b3d49cf62357fe53de2d0 215 Gene3D G3DSA:1.20.1050.10 84 208 3.7E-26 T 14-10-2018 C3Y93_10385 edb9d656e63b3d49cf62357fe53de2d0 215 SUPERFAMILY SSF47616 92 208 3.34E-19 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C3Y93_12075 eae7d140c1552a96b5122cc39dca4d9a 415 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 2 299 21.265 T 14-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial C3Y93_12075 eae7d140c1552a96b5122cc39dca4d9a 415 Pfam PF03631 Virulence factor BrkB 30 277 8.2E-54 T 14-10-2018 IPR017039 Virulence factor BrkB C3Y93_12075 eae7d140c1552a96b5122cc39dca4d9a 415 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 279 1.4E-58 T 14-10-2018 IPR017039 Virulence factor BrkB C3Y93_03815 566c4707b1f0b307d478c569c3d58b6c 108 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 19 91 3.5E-16 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 C3Y93_03815 566c4707b1f0b307d478c569c3d58b6c 108 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 12 107 2.1E-37 T 14-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 C3Y93_12350 7b66c96209fce22b011346b1ff538448 427 Pfam PF08245 Mur ligase middle domain 52 193 1.0E-15 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C3Y93_12350 7b66c96209fce22b011346b1ff538448 427 Gene3D G3DSA:3.90.190.20 290 424 8.6E-26 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3Y93_12350 7b66c96209fce22b011346b1ff538448 427 PIRSF PIRSF001563 4 427 8.9E-110 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 C3Y93_12350 7b66c96209fce22b011346b1ff538448 427 Gene3D G3DSA:3.40.1190.10 2 289 1.4E-92 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3Y93_12350 7b66c96209fce22b011346b1ff538448 427 SUPERFAMILY SSF53623 10 286 4.58E-86 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C3Y93_12350 7b66c96209fce22b011346b1ff538448 427 TIGRFAM TIGR01499 folC: bifunctional protein FolC 30 422 1.1E-100 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 C3Y93_12350 7b66c96209fce22b011346b1ff538448 427 SUPERFAMILY SSF53244 290 424 2.56E-24 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C3Y93_06255 bddfec6f9c0b3dfbf972856cecce7316 308 Pfam PF01553 Acyltransferase 88 235 2.3E-10 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3Y93_06255 bddfec6f9c0b3dfbf972856cecce7316 308 SMART SM00563 94 236 3.3E-10 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3Y93_06255 bddfec6f9c0b3dfbf972856cecce7316 308 SUPERFAMILY SSF69593 83 298 1.06E-28 T 14-10-2018 C3Y93_13320 336eec9d820f3ad886f8719c99514ecc 308 PIRSF PIRSF016660 1 306 7.6E-128 T 14-10-2018 IPR008526 Inner membrane protein YedI C3Y93_13320 336eec9d820f3ad886f8719c99514ecc 308 Pfam PF05661 Protein of unknown function (DUF808) 3 294 1.9E-114 T 14-10-2018 IPR008526 Inner membrane protein YedI C3Y93_08075 b82a88046b3e1bd5b7fa991ff9abde71 342 Pfam PF03280 Proteobacterial lipase chaperone protein 131 321 3.9E-54 T 14-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 C3Y93_08075 b82a88046b3e1bd5b7fa991ff9abde71 342 Hamap MF_00790 Lipase chaperone [lifO]. 3 330 20.993 T 14-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 C3Y93_08075 b82a88046b3e1bd5b7fa991ff9abde71 342 SUPERFAMILY SSF158855 59 333 5.36E-90 T 14-10-2018 C3Y93_03565 e919d63c44b0c22153feeac4cae021bc 386 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 376 5.0E-105 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 C3Y93_03565 e919d63c44b0c22153feeac4cae021bc 386 SUPERFAMILY SSF56796 2 385 4.06E-110 T 14-10-2018 C3Y93_03565 e919d63c44b0c22153feeac4cae021bc 386 Gene3D G3DSA:3.40.50.1970 1 185 1.6E-50 T 14-10-2018 C3Y93_03565 e919d63c44b0c22153feeac4cae021bc 386 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 C3Y93_03565 e919d63c44b0c22153feeac4cae021bc 386 Gene3D G3DSA:1.20.1090.10 186 386 1.0E-55 T 14-10-2018 C3Y93_06565 12aafd7531489943fa40c2af0ed25f0f 322 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 153 312 1.4E-22 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3Y93_06565 12aafd7531489943fa40c2af0ed25f0f 322 SMART SM00331 126 320 9.5E-11 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3Y93_06565 12aafd7531489943fa40c2af0ed25f0f 322 Gene3D G3DSA:3.60.40.10 93 321 4.7E-39 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C3Y93_04805 7a019822d0c71fce1809600946b03a1b 547 Pfam PF12236 Bacteriophage head to tail connecting protein 14 494 2.7E-123 T 14-10-2018 IPR020991 Head-to-tail connector protein, podovirus-type C3Y93_02435 39b1b27e0e7d0a0a78388dc1f073a01b 363 Gene3D G3DSA:3.30.450.40 9 178 2.0E-29 T 14-10-2018 IPR029016 GAF-like domain superfamily C3Y93_06270 3ce11497d9b9df546261c9a7cf5b3c5c 270 SUPERFAMILY SSF52540 2 268 1.51E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_06270 3ce11497d9b9df546261c9a7cf5b3c5c 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.3E-106 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 C3Y93_06270 3ce11497d9b9df546261c9a7cf5b3c5c 270 Gene3D G3DSA:3.40.50.300 1 260 4.5E-72 T 14-10-2018 C3Y93_06270 3ce11497d9b9df546261c9a7cf5b3c5c 270 PIRSF PIRSF003092 1 270 4.0E-90 T 14-10-2018 IPR025501 ATP binding protein MinD C3Y93_06270 3ce11497d9b9df546261c9a7cf5b3c5c 270 Pfam PF13614 AAA domain 3 168 9.9E-22 T 14-10-2018 IPR025669 AAA domain C3Y93_05500 afe32a46653eecd1bb9ab120dabedf28 208 SUPERFAMILY SSF69593 39 167 3.14E-11 T 14-10-2018 C3Y93_05500 afe32a46653eecd1bb9ab120dabedf28 208 SMART SM00563 43 161 2.9E-14 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3Y93_04085 c02f2b882c4a91e5e25d55343acdf187 354 Gene3D G3DSA:3.90.320.10 44 250 4.5E-38 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal C3Y93_04085 c02f2b882c4a91e5e25d55343acdf187 354 SUPERFAMILY SSF52980 43 231 1.39E-33 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C3Y93_04085 c02f2b882c4a91e5e25d55343acdf187 354 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 44 198 1.3E-38 T 14-10-2018 IPR017482 Putative phage-type endonuclease C3Y93_04085 c02f2b882c4a91e5e25d55343acdf187 354 Pfam PF09588 YqaJ-like viral recombinase domain 47 189 2.5E-34 T 14-10-2018 IPR019080 YqaJ viral recombinase C3Y93_11235 8601cd36540a9ff64f2f22ee8d254bae 304 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 70 223 2.2E-46 T 14-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 C3Y93_11235 8601cd36540a9ff64f2f22ee8d254bae 304 SUPERFAMILY SSF51197 100 239 3.02E-17 T 14-10-2018 C3Y93_11235 8601cd36540a9ff64f2f22ee8d254bae 304 Gene3D G3DSA:2.60.120.330 44 230 2.7E-42 T 14-10-2018 IPR027443 Isopenicillin N synthase-like C3Y93_13840 9d249a40d3a62def7b7296169f744e08 147 Pfam PF10881 Protein of unknown function (DUF2726) 38 146 3.4E-17 T 14-10-2018 IPR024402 Domain of unknown function DUF2726 C3Y93_13840 9d249a40d3a62def7b7296169f744e08 147 Gene3D G3DSA:3.40.960.10 40 145 3.3E-9 T 14-10-2018 C3Y93_13545 6d0ef9039460c8f640d9980798708d88 538 Pfam PF01384 Phosphate transporter family 80 527 7.8E-87 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 C3Y93_02270 77acdf5bcb973f4d8b99762f52b12169 197 Gene3D G3DSA:3.40.109.10 1 197 4.3E-80 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3Y93_02270 77acdf5bcb973f4d8b99762f52b12169 197 Pfam PF00881 Nitroreductase family 8 175 2.2E-15 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 C3Y93_02270 77acdf5bcb973f4d8b99762f52b12169 197 SUPERFAMILY SSF55469 1 196 6.67E-67 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3Y93_07555 02ef9586bfa5bda091a81fb95dd8067f 351 Pfam PF13387 Domain of unknown function (DUF4105) 120 271 5.9E-46 T 14-10-2018 IPR025178 Domain of unknown function DUF4105 C3Y93_09375 5b4b039c4e48e192496bd0e1f8da3446 442 Pfam PF04286 Protein of unknown function (DUF445) 62 436 8.1E-73 T 14-10-2018 IPR007383 Protein of unknown function DUF445 C3Y93_09530 2edbe36f0de45a314d832540b78d242b 52 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 51 17.475 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 C3Y93_09530 2edbe36f0de45a314d832540b78d242b 52 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 3.0E-9 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 C3Y93_09530 2edbe36f0de45a314d832540b78d242b 52 PIRSF PIRSF036466 1 52 3.2E-18 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 C3Y93_11310 58d8463a1ccf91a56dba13724a6deb4c 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 505 2.4E-18 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal C3Y93_11310 58d8463a1ccf91a56dba13724a6deb4c 553 Gene3D G3DSA:3.40.50.300 1 257 1.5E-41 T 14-10-2018 C3Y93_11310 58d8463a1ccf91a56dba13724a6deb4c 553 SUPERFAMILY SSF52540 1 203 7.12E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_11310 58d8463a1ccf91a56dba13724a6deb4c 553 PIRSF PIRSF003128 1 552 1.1E-134 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 C3Y93_11310 58d8463a1ccf91a56dba13724a6deb4c 553 Gene3D G3DSA:3.40.50.300 258 512 2.4E-22 T 14-10-2018 C3Y93_11310 58d8463a1ccf91a56dba13724a6deb4c 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 545 1.0E-135 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 C3Y93_11310 58d8463a1ccf91a56dba13724a6deb4c 553 SUPERFAMILY SSF52540 3 503 8.5E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_09005 aa05d2ca15d973353910263f17e319d1 174 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 6 171 2.0E-56 T 14-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria C3Y93_09005 aa05d2ca15d973353910263f17e319d1 174 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 174 79.714 T 14-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria C3Y93_09005 aa05d2ca15d973353910263f17e319d1 174 Pfam PF03350 Uncharacterized protein family, UPF0114 13 129 1.4E-38 T 14-10-2018 IPR005134 Uncharacterised protein family UPF0114 C3Y93_03705 a64ab9871888121b6e4f9284b9fc4b0f 126 Gene3D G3DSA:3.30.1130.10 1 118 5.6E-33 T 14-10-2018 C3Y93_03705 a64ab9871888121b6e4f9284b9fc4b0f 126 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 114 3.8E-25 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 C3Y93_03705 a64ab9871888121b6e4f9284b9fc4b0f 126 TIGRFAM TIGR00526 folB_dom: FolB domain 1 118 6.3E-27 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 C3Y93_03705 a64ab9871888121b6e4f9284b9fc4b0f 126 SMART SM00905 4 115 1.5E-35 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 C3Y93_03705 a64ab9871888121b6e4f9284b9fc4b0f 126 Pfam PF02152 Dihydroneopterin aldolase 4 113 7.1E-28 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 C3Y93_03705 a64ab9871888121b6e4f9284b9fc4b0f 126 SUPERFAMILY SSF55620 1 117 1.17E-29 T 14-10-2018 C3Y93_04945 f46b27a206b6383f2d3d4786edf4c195 151 Pfam PF06127 Protein of unknown function (DUF962) 1 135 5.8E-22 T 14-10-2018 IPR009305 Protein of unknown function DUF962 C3Y93_00780 f39def73d2ef071af8b05bee19b39836 121 Pfam PF04241 Protein of unknown function (DUF423) 16 102 1.3E-25 T 14-10-2018 IPR006696 Protein of unknown function DUF423 C3Y93_04965 cf4a3a0679327db58bec623b4afc6254 275 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 12 264 5.1E-99 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3Y93_04965 cf4a3a0679327db58bec623b4afc6254 275 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 182 200 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3Y93_04965 cf4a3a0679327db58bec623b4afc6254 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 82 95 1.7E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3Y93_04965 cf4a3a0679327db58bec623b4afc6254 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 176 188 1.7E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3Y93_04965 cf4a3a0679327db58bec623b4afc6254 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 219 1.7E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3Y93_04965 cf4a3a0679327db58bec623b4afc6254 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 105 121 1.7E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3Y93_04965 cf4a3a0679327db58bec623b4afc6254 275 Hamap MF_01974 Methionine aminopeptidase [map]. 10 265 41.468 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 C3Y93_04965 cf4a3a0679327db58bec623b4afc6254 275 Pfam PF00557 Metallopeptidase family M24 19 256 4.5E-53 T 14-10-2018 IPR000994 Peptidase M24 C3Y93_04965 cf4a3a0679327db58bec623b4afc6254 275 Gene3D G3DSA:3.90.230.10 10 274 5.9E-107 T 14-10-2018 C3Y93_04965 cf4a3a0679327db58bec623b4afc6254 275 SUPERFAMILY SSF55920 10 268 4.97E-88 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like C3Y93_00885 4318f524ab0536d0934d2c1684adb396 148 Gene3D G3DSA:1.10.1510.10 1 91 3.4E-26 T 14-10-2018 C3Y93_00885 4318f524ab0536d0934d2c1684adb396 148 Gene3D G3DSA:1.10.10.410 92 148 6.2E-17 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal C3Y93_00885 4318f524ab0536d0934d2c1684adb396 148 Pfam PF09424 Yqey-like protein 5 147 6.2E-50 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 C3Y93_00885 4318f524ab0536d0934d2c1684adb396 148 SUPERFAMILY SSF89095 3 148 4.92E-38 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 C3Y93_11635 b663985e983288b7768802cc065fe94c 228 SUPERFAMILY SSF53335 21 156 4.62E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_11635 b663985e983288b7768802cc065fe94c 228 Gene3D G3DSA:3.40.50.150 3 195 3.9E-28 T 14-10-2018 C3Y93_11635 b663985e983288b7768802cc065fe94c 228 Pfam PF02390 Putative methyltransferase 23 161 4.6E-21 T 14-10-2018 C3Y93_05540 c96524b1815b2567f59a487dd9bf08a0 106 Pfam PF00085 Thioredoxin 5 103 7.0E-21 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C3Y93_05540 c96524b1815b2567f59a487dd9bf08a0 106 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C3Y93_05540 c96524b1815b2567f59a487dd9bf08a0 106 Gene3D G3DSA:3.40.30.10 1 106 2.0E-26 T 14-10-2018 C3Y93_05540 c96524b1815b2567f59a487dd9bf08a0 106 SUPERFAMILY SSF52833 2 106 7.73E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_05540 c96524b1815b2567f59a487dd9bf08a0 106 PIRSF PIRSF000077 1 106 1.0E-23 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C3Y93_02265 aa8a4bc855b9d80458f3bebe1aafc745 228 SUPERFAMILY SSF55469 34 227 6.54E-57 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3Y93_02265 aa8a4bc855b9d80458f3bebe1aafc745 228 Gene3D G3DSA:3.40.109.10 32 228 4.9E-74 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C3Y93_02265 aa8a4bc855b9d80458f3bebe1aafc745 228 Pfam PF00881 Nitroreductase family 39 206 5.9E-12 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 C3Y93_07980 e2e81a682a9928d8f74f5ab60986c662 93 Pfam PF04221 RelB antitoxin 9 70 1.6E-7 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ C3Y93_07980 e2e81a682a9928d8f74f5ab60986c662 93 Gene3D G3DSA:1.10.1220.10 7 82 6.8E-9 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 C3Y93_07305 b6a96b2204145dbcb9f2c1f511cf4bbf 215 SUPERFAMILY SSF158615 48 142 7.06E-5 T 14-10-2018 IPR038052 Chaperonin-like RbcX superfamily C3Y93_13495 3dece32b3439f7dd9774f30f214c244c 196 Pfam PF13430 Domain of unknown function (DUF4112) 22 121 2.2E-22 T 14-10-2018 IPR025187 Protein of unknown function DUF4112 C3Y93_09200 26c80b5e5c86be5f1cd1a01877d1cc74 146 Pfam PF05258 Protein of unknown function (DUF721) 45 95 2.4E-4 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 C3Y93_03415 13117d93162da1d7bb40d00a3ec2126b 137 Gene3D G3DSA:3.10.450.50 3 137 3.2E-44 T 14-10-2018 C3Y93_03415 13117d93162da1d7bb40d00a3ec2126b 137 SUPERFAMILY SSF54427 10 114 2.3E-21 T 14-10-2018 IPR032710 NTF2-like domain superfamily C3Y93_03415 13117d93162da1d7bb40d00a3ec2126b 137 Pfam PF12680 SnoaL-like domain 10 107 5.2E-8 T 14-10-2018 IPR037401 SnoaL-like domain C3Y93_11855 17c22c6002ac6357fd48f37f40946a3b 163 Pfam PF01661 Macro domain 87 133 1.9E-6 T 14-10-2018 IPR002589 Macro domain C3Y93_11855 17c22c6002ac6357fd48f37f40946a3b 163 SMART SM00506 1 135 1.0E-5 T 14-10-2018 IPR002589 Macro domain C3Y93_11855 17c22c6002ac6357fd48f37f40946a3b 163 Gene3D G3DSA:3.40.220.10 1 151 2.1E-31 T 14-10-2018 C3Y93_11855 17c22c6002ac6357fd48f37f40946a3b 163 SUPERFAMILY SSF52949 1 150 3.36E-32 T 14-10-2018 C3Y93_00375 041a21d5bf277fc24700fdeffdd0d721 462 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 219 459 1.5E-63 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 C3Y93_00375 041a21d5bf277fc24700fdeffdd0d721 462 Gene3D G3DSA:1.10.3720.10 232 460 4.3E-34 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_00375 041a21d5bf277fc24700fdeffdd0d721 462 Pfam PF11812 Domain of unknown function (DUF3333) 30 193 1.6E-42 T 14-10-2018 IPR024573 Domain of unknown function DUF3333 C3Y93_00375 041a21d5bf277fc24700fdeffdd0d721 462 SUPERFAMILY SSF161098 236 448 1.1E-35 T 14-10-2018 IPR035906 MetI-like superfamily C3Y93_00375 041a21d5bf277fc24700fdeffdd0d721 462 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 258 459 5.6E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C3Y93_04675 d965233f5dcdc071b8a496982b5feabb 344 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 340 7.5E-117 T 14-10-2018 IPR017686 Phage/plasmid-like protein C3Y93_04675 d965233f5dcdc071b8a496982b5feabb 344 Pfam PF06067 Domain of unknown function (DUF932) 77 324 1.8E-79 T 14-10-2018 IPR026325 Protein of unknown function DUF932 C3Y93_04995 d4877cb7d7915f9306fa53a6337b5822 128 SUPERFAMILY SSF69118 4 123 1.31E-33 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 C3Y93_04995 d4877cb7d7915f9306fa53a6337b5822 128 Gene3D G3DSA:1.20.1290.10 3 126 1.1E-36 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 C3Y93_04995 d4877cb7d7915f9306fa53a6337b5822 128 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 1.1E-21 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 C3Y93_09655 ea79fb8c66dc07e4662a081086af942d 188 Gene3D G3DSA:3.40.50.1580 2 187 5.0E-37 T 14-10-2018 C3Y93_09655 ea79fb8c66dc07e4662a081086af942d 188 SUPERFAMILY SSF53167 5 181 7.2E-32 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 C3Y93_09655 ea79fb8c66dc07e4662a081086af942d 188 Pfam PF01048 Phosphorylase superfamily 28 169 8.3E-16 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 C3Y93_11655 edc29479d70acbe6be6a6cd98c9183d1 422 SUPERFAMILY SSF53474 50 191 3.4E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_12105 7a81debcb1baf66a9c675a7d78728c45 237 Pfam PF11306 Protein of unknown function (DUF3108) 24 220 3.3E-22 T 14-10-2018 IPR021457 Protein of unknown function DUF3108 C3Y93_06410 7fc4362b925b89487b4cef4210795129 343 Pfam PF01435 Peptidase family M48 179 334 2.4E-22 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 C3Y93_02225 8fac5a6811adf5d05be4de99d4b9a6a6 144 SMART SM00116 15 63 9.7E-10 T 14-10-2018 IPR000644 CBS domain C3Y93_02225 8fac5a6811adf5d05be4de99d4b9a6a6 144 SMART SM00116 81 128 8.1E-9 T 14-10-2018 IPR000644 CBS domain C3Y93_02225 8fac5a6811adf5d05be4de99d4b9a6a6 144 Gene3D G3DSA:3.10.580.10 1 144 9.0E-47 T 14-10-2018 C3Y93_02225 8fac5a6811adf5d05be4de99d4b9a6a6 144 Pfam PF00571 CBS domain 74 126 2.1E-13 T 14-10-2018 IPR000644 CBS domain C3Y93_02225 8fac5a6811adf5d05be4de99d4b9a6a6 144 Pfam PF00571 CBS domain 14 60 2.3E-11 T 14-10-2018 IPR000644 CBS domain C3Y93_02225 8fac5a6811adf5d05be4de99d4b9a6a6 144 SUPERFAMILY SSF54631 10 142 9.47E-36 T 14-10-2018 C3Y93_03155 148aaeb05e36ac9596cc599d53871e1a 378 Pfam PF00285 Citrate synthase, C-terminal domain 11 357 3.3E-117 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3Y93_03155 148aaeb05e36ac9596cc599d53871e1a 378 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 375 5.0E-160 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 C3Y93_03155 148aaeb05e36ac9596cc599d53871e1a 378 PIRSF PIRSF001369 3 376 6.7E-121 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type C3Y93_03155 148aaeb05e36ac9596cc599d53871e1a 378 SUPERFAMILY SSF48256 6 375 8.5E-127 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 C3Y93_03155 148aaeb05e36ac9596cc599d53871e1a 378 Gene3D G3DSA:1.10.230.10 224 322 3.4E-124 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain C3Y93_03155 148aaeb05e36ac9596cc599d53871e1a 378 Gene3D G3DSA:1.10.580.10 32 355 3.4E-124 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 C3Y93_03155 148aaeb05e36ac9596cc599d53871e1a 378 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 C3Y93_03155 148aaeb05e36ac9596cc599d53871e1a 378 PRINTS PR00143 Citrate synthase signature 251 271 1.5E-38 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3Y93_03155 148aaeb05e36ac9596cc599d53871e1a 378 PRINTS PR00143 Citrate synthase signature 126 139 1.5E-38 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3Y93_03155 148aaeb05e36ac9596cc599d53871e1a 378 PRINTS PR00143 Citrate synthase signature 176 191 1.5E-38 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3Y93_03155 148aaeb05e36ac9596cc599d53871e1a 378 PRINTS PR00143 Citrate synthase signature 308 324 1.5E-38 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3Y93_03155 148aaeb05e36ac9596cc599d53871e1a 378 PRINTS PR00143 Citrate synthase signature 198 226 1.5E-38 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3Y93_03155 148aaeb05e36ac9596cc599d53871e1a 378 PRINTS PR00143 Citrate synthase signature 328 342 1.5E-38 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C3Y93_04605 79f0508961ebf26c907251b28beff189 3928 SMART SM00912 39 156 8.8E-27 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal C3Y93_04605 79f0508961ebf26c907251b28beff189 3928 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 77 151 1.0E-18 T 14-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal C3Y93_04605 79f0508961ebf26c907251b28beff189 3928 Gene3D G3DSA:2.160.20.10 36 348 6.2E-48 T 14-10-2018 IPR012334 Pectin lyase fold C3Y93_04605 79f0508961ebf26c907251b28beff189 3928 SUPERFAMILY SSF51126 66 329 3.45E-27 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor C3Y93_00225 81c3bd29be878d48b39fb1cd620feda3 148 Pfam PF13279 Thioesterase-like superfamily 11 130 1.5E-9 T 14-10-2018 C3Y93_00225 81c3bd29be878d48b39fb1cd620feda3 148 Gene3D G3DSA:3.10.129.10 1 139 7.9E-34 T 14-10-2018 C3Y93_00225 81c3bd29be878d48b39fb1cd620feda3 148 SUPERFAMILY SSF54637 1 135 5.25E-40 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_04045 75f7d3c1f5b71d88ca620e598a5753fb 345 Pfam PF11726 Inovirus Gp2 167 329 2.2E-15 T 14-10-2018 C3Y93_08960 6ae64008a2d4cf0193de7d12d912b140 404 SUPERFAMILY SSF103473 8 394 4.32E-49 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_08960 6ae64008a2d4cf0193de7d12d912b140 404 Pfam PF07690 Major Facilitator Superfamily 24 355 2.1E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_08960 6ae64008a2d4cf0193de7d12d912b140 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 390 7.5E-96 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 C3Y93_08960 6ae64008a2d4cf0193de7d12d912b140 404 Gene3D G3DSA:1.20.1720.10 15 390 8.6E-78 T 14-10-2018 C3Y93_09105 1eeefdf3bacdd0e72fceb6bf26308c76 486 Pfam PF11855 Protein of unknown function (DUF3375) 12 471 4.4E-112 T 14-10-2018 IPR021804 Protein of unknown function DUF3375 C3Y93_12770 fd35354f42681ff9ca6f9d571dd74cfc 231 SMART SM00345 13 71 2.3E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3Y93_12770 fd35354f42681ff9ca6f9d571dd74cfc 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 2.7E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C3Y93_12770 fd35354f42681ff9ca6f9d571dd74cfc 231 Pfam PF07729 FCD domain 83 202 1.2E-7 T 14-10-2018 IPR011711 GntR, C-terminal C3Y93_12770 fd35354f42681ff9ca6f9d571dd74cfc 231 Gene3D G3DSA:1.10.10.10 5 73 9.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_12770 fd35354f42681ff9ca6f9d571dd74cfc 231 SUPERFAMILY SSF48008 92 213 4.45E-5 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal C3Y93_12770 fd35354f42681ff9ca6f9d571dd74cfc 231 SUPERFAMILY SSF46785 3 75 5.83E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_12770 fd35354f42681ff9ca6f9d571dd74cfc 231 Gene3D G3DSA:1.20.120.530 74 214 7.3E-8 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal C3Y93_10710 23a724d631361e636738b5aa3c1271be 336 SUPERFAMILY SSF56281 55 287 1.39E-23 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_10710 23a724d631361e636738b5aa3c1271be 336 SMART SM00849 55 246 0.001 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_10710 23a724d631361e636738b5aa3c1271be 336 Gene3D G3DSA:3.60.15.10 32 315 5.5E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C3Y93_10710 23a724d631361e636738b5aa3c1271be 336 Pfam PF12706 Beta-lactamase superfamily domain 67 278 1.2E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase C3Y93_06420 0234fdae4879299ffb3ea5e423e2f23d 279 Pfam PF00756 Putative esterase 21 270 4.9E-54 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 C3Y93_06420 0234fdae4879299ffb3ea5e423e2f23d 279 Gene3D G3DSA:3.40.50.1820 1 278 3.1E-87 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_06420 0234fdae4879299ffb3ea5e423e2f23d 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 276 2.2E-122 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 C3Y93_06420 0234fdae4879299ffb3ea5e423e2f23d 279 SUPERFAMILY SSF53474 1 273 3.06E-80 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_00985 495adef23012d7da0ba45fb7919c0244 115 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 107 2.4E-8 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD C3Y93_05615 914d4d6c1f4482cb66212ddf086e6f7d 272 Gene3D G3DSA:3.40.50.620 95 246 2.5E-8 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C3Y93_05615 914d4d6c1f4482cb66212ddf086e6f7d 272 Pfam PF02698 DUF218 domain 116 261 1.8E-30 T 14-10-2018 IPR003848 Domain of unknown function DUF218 C3Y93_03305 8b0162ba238e41d7248536b3ff90aff6 457 Pfam PF03109 ABC1 family 128 232 1.9E-25 T 14-10-2018 IPR004147 UbiB domain C3Y93_03305 8b0162ba238e41d7248536b3ff90aff6 457 SUPERFAMILY SSF56112 107 317 7.02E-10 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3Y93_06380 59910daab3707a12cb92a3dfda48ec57 353 Gene3D G3DSA:1.20.1510.10 175 352 8.7E-12 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3Y93_06380 59910daab3707a12cb92a3dfda48ec57 353 Pfam PF01545 Cation efflux family 181 350 2.5E-15 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C3Y93_06380 59910daab3707a12cb92a3dfda48ec57 353 SUPERFAMILY SSF161111 175 350 1.31E-31 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C3Y93_06380 59910daab3707a12cb92a3dfda48ec57 353 SUPERFAMILY SSF55008 94 156 1.07E-6 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C3Y93_06045 290e6863740c38d7c7600e1b21651448 398 Pfam PF05992 SbmA/BacA-like family 84 396 3.4E-156 T 14-10-2018 IPR009248 SbmA/BacA-like GO:0015833|GO:0016021|GO:1904680 C3Y93_12125 2aef8b2f26cbeb97c202fdaba55d7114 357 Gene3D G3DSA:3.40.50.300 115 321 2.8E-75 T 14-10-2018 C3Y93_12125 2aef8b2f26cbeb97c202fdaba55d7114 357 SUPERFAMILY SSF52540 117 293 6.32E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_12125 2aef8b2f26cbeb97c202fdaba55d7114 357 Pfam PF02562 PhoH-like protein 118 321 8.0E-95 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 C3Y93_02955 81d3ab2947efb032467480881f81978d 133 Gene3D G3DSA:3.40.960.10 31 133 1.2E-10 T 14-10-2018 C3Y93_02955 81d3ab2947efb032467480881f81978d 133 Pfam PF04480 Protein of unknown function (DUF559) 33 121 8.6E-6 T 14-10-2018 IPR007569 Protein of unknown function DUF559 C3Y93_10795 58667d4019df1542bc6b240c3d2dea3b 250 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 5 250 2.3E-44 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 C3Y93_10795 58667d4019df1542bc6b240c3d2dea3b 250 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 23 250 5.9E-37 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 C3Y93_13700 3a67d9af5c885bfaed924513ad977afe 165 Pfam PF10698 Protein of unknown function (DUF2505) 14 148 3.0E-13 T 14-10-2018 IPR019639 Protein of unknown function DUF2505 C3Y93_01850 b8483f508b6415f61616e01a23621cab 430 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 414 1.6E-141 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 C3Y93_01850 b8483f508b6415f61616e01a23621cab 430 Pfam PF05525 Branched-chain amino acid transport protein 7 428 2.7E-143 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 C3Y93_13645 b673a28399fa2be79af0aced4219dff0 168 Gene3D G3DSA:3.40.50.1820 6 166 1.3E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_13645 b673a28399fa2be79af0aced4219dff0 168 Pfam PF05728 Uncharacterised protein family (UPF0227) 8 93 9.7E-11 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA C3Y93_13645 b673a28399fa2be79af0aced4219dff0 168 SUPERFAMILY SSF53474 8 149 2.6E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_05870 84f74c27d4c4858b44b39562f3ba67be 537 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 10 511 1.9E-156 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05870 84f74c27d4c4858b44b39562f3ba67be 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 180 204 7.6E-34 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05870 84f74c27d4c4858b44b39562f3ba67be 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 260 284 7.6E-34 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05870 84f74c27d4c4858b44b39562f3ba67be 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 400 426 7.6E-34 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05870 84f74c27d4c4858b44b39562f3ba67be 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 348 367 7.6E-34 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05870 84f74c27d4c4858b44b39562f3ba67be 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 145 164 7.6E-34 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05870 84f74c27d4c4858b44b39562f3ba67be 537 Pfam PF00361 Proton-conducting membrane transporter 139 441 1.9E-67 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_04870 0cd4d325ed0cdf0a989a5044c8732783 293 Pfam PF12684 PDDEXK-like domain of unknown function (DUF3799) 29 267 3.5E-32 T 14-10-2018 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain C3Y93_03000 4d25b9486bb323bef101caf0de4868aa 289 Pfam PF07120 Protein of unknown function (DUF1376) 2 88 5.9E-23 T 14-10-2018 IPR010781 Protein of unknown function DUF1376 C3Y93_07880 463d910b8396c10a28f39cc8930ba2ec 95 SUPERFAMILY SSF52091 9 92 1.2E-8 T 14-10-2018 IPR036513 STAS domain superfamily C3Y93_07880 463d910b8396c10a28f39cc8930ba2ec 95 Pfam PF13466 STAS domain 9 83 3.4E-8 T 14-10-2018 IPR002645 STAS domain C3Y93_07880 463d910b8396c10a28f39cc8930ba2ec 95 Gene3D G3DSA:3.30.750.24 7 94 5.2E-9 T 14-10-2018 IPR036513 STAS domain superfamily C3Y93_03385 2712a6c2a4bc1ef9209b61ccfefd394d 134 Pfam PF04977 Septum formation initiator 22 99 2.0E-21 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC C3Y93_03385 2712a6c2a4bc1ef9209b61ccfefd394d 134 Hamap MF_00599 Cell division protein FtsB [ftsB]. 13 101 25.716 T 14-10-2018 IPR023081 Cell division protein FtsB C3Y93_07400 581ce466126af5a453a742a757a651a0 129 Pfam PF05717 IS66 Orf2 like protein 24 120 1.2E-30 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C3Y93_04015 7e0fc4c806ebc3fbbef0fe95587aa88d 188 SUPERFAMILY SSF52949 5 182 3.03E-55 T 14-10-2018 C3Y93_04015 7e0fc4c806ebc3fbbef0fe95587aa88d 188 Pfam PF01661 Macro domain 23 139 1.9E-35 T 14-10-2018 IPR002589 Macro domain C3Y93_04015 7e0fc4c806ebc3fbbef0fe95587aa88d 188 Gene3D G3DSA:3.40.220.10 1 186 3.7E-60 T 14-10-2018 C3Y93_04015 7e0fc4c806ebc3fbbef0fe95587aa88d 188 SMART SM00506 6 139 2.9E-41 T 14-10-2018 IPR002589 Macro domain C3Y93_08445 157139047df481d300f779df81e77a27 154 Pfam PF05656 Protein of unknown function (DUF805) 11 122 1.8E-19 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 281 335 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 98 121 2.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 384 402 2.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 279 300 2.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 199 217 2.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 349 370 2.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 125 149 2.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 48 73 2.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 228 247 2.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 412 431 2.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 325 340 2.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 462 483 2.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 167 179 2.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 SUPERFAMILY SSF81442 44 560 9.94E-176 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 Gene3D G3DSA:1.20.210.10 31 565 1.2E-188 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 57 505 3.9E-137 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C3Y93_03805 6b6f23dd78932067849a37c75da0c00c 662 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 4 648 0.0 T 14-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 C3Y93_01865 c91c8b7ddc372f0befc7332aa52e7903 142 SUPERFAMILY SSF109604 3 126 6.15E-23 T 14-10-2018 C3Y93_01865 c91c8b7ddc372f0befc7332aa52e7903 142 Gene3D G3DSA:1.10.3210.10 1 142 2.7E-23 T 14-10-2018 C3Y93_02610 2f417d4c3ab0a416be22c9ab00cd4bc7 162 Gene3D G3DSA:1.10.10.10 3 161 6.3E-50 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C3Y93_02610 2f417d4c3ab0a416be22c9ab00cd4bc7 162 SUPERFAMILY SSF46785 7 143 3.14E-41 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C3Y93_02610 2f417d4c3ab0a416be22c9ab00cd4bc7 162 Pfam PF01638 HxlR-like helix-turn-helix 19 106 2.5E-23 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type C3Y93_04030 31455633956c69a5604eb0694e4f717d 402 SUPERFAMILY SSF116734 231 401 1.6E-20 T 14-10-2018 C3Y93_04030 31455633956c69a5604eb0694e4f717d 402 Gene3D G3DSA:3.90.220.20 219 359 1.5E-52 T 14-10-2018 C3Y93_04030 31455633956c69a5604eb0694e4f717d 402 Pfam PF01420 Type I restriction modification DNA specificity domain 33 186 2.1E-13 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 C3Y93_04030 31455633956c69a5604eb0694e4f717d 402 Pfam PF01420 Type I restriction modification DNA specificity domain 290 389 8.3E-6 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 C3Y93_04030 31455633956c69a5604eb0694e4f717d 402 Gene3D G3DSA:3.90.220.20 16 158 1.5E-52 T 14-10-2018 C3Y93_04030 31455633956c69a5604eb0694e4f717d 402 Gene3D G3DSA:1.10.287.1120 159 400 1.5E-52 T 14-10-2018 C3Y93_04030 31455633956c69a5604eb0694e4f717d 402 SUPERFAMILY SSF116734 3 208 9.32E-41 T 14-10-2018 C3Y93_00685 0dac87966be5f96edbf8b62aec1ca1b0 494 Pfam PF00691 OmpA family 369 464 1.6E-23 T 14-10-2018 IPR006665 OmpA-like domain C3Y93_00685 0dac87966be5f96edbf8b62aec1ca1b0 494 Gene3D G3DSA:3.30.1330.60 330 477 1.4E-37 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3Y93_00685 0dac87966be5f96edbf8b62aec1ca1b0 494 SUPERFAMILY SSF103088 358 469 1.26E-32 T 14-10-2018 IPR036737 OmpA-like domain superfamily C3Y93_00685 0dac87966be5f96edbf8b62aec1ca1b0 494 PRINTS PR01021 OMPA domain signature 370 392 6.4E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_00685 0dac87966be5f96edbf8b62aec1ca1b0 494 PRINTS PR01021 OMPA domain signature 400 415 6.4E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_00685 0dac87966be5f96edbf8b62aec1ca1b0 494 PRINTS PR01021 OMPA domain signature 415 431 6.4E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C3Y93_11890 c4f27f979794b7e7fdfec8ef21fca76b 78 Pfam PF09834 Predicted membrane protein (DUF2061) 17 66 1.2E-18 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane C3Y93_10535 044648c09fe3edc487ca37bd1b9f58a6 266 SUPERFAMILY SSF81345 4 256 3.92E-31 T 14-10-2018 IPR037294 ABC transporter, BtuC-like C3Y93_10535 044648c09fe3edc487ca37bd1b9f58a6 266 Pfam PF00950 ABC 3 transport family 6 258 3.4E-53 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 C3Y93_08060 fc2b1f46b152de6ffa7401de4cc4f782 292 Pfam PF00892 EamA-like transporter family 146 279 5.8E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_08060 fc2b1f46b152de6ffa7401de4cc4f782 292 SUPERFAMILY SSF103481 184 281 3.27E-12 T 14-10-2018 C3Y93_12595 ce8df491e042f72cd20a6539ff980055 161 PIRSF PIRSF030820 2 161 2.8E-35 T 14-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 C3Y93_12595 ce8df491e042f72cd20a6539ff980055 161 Pfam PF06073 Bacterial protein of unknown function (DUF934) 54 156 4.1E-32 T 14-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 C3Y93_08715 d77fcb463ae1fab45a54a2cf7ddb561f 163 Gene3D G3DSA:2.60.120.10 18 157 1.5E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C3Y93_08715 d77fcb463ae1fab45a54a2cf7ddb561f 163 SUPERFAMILY SSF51182 39 136 1.09E-23 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C3Y93_08715 d77fcb463ae1fab45a54a2cf7ddb561f 163 Pfam PF07883 Cupin domain 53 116 2.0E-17 T 14-10-2018 IPR013096 Cupin 2, conserved barrel C3Y93_07680 6b74574720a46648f52c4ec5d0547b25 118 Gene3D G3DSA:1.10.8.50 1 71 2.3E-26 T 14-10-2018 C3Y93_07680 6b74574720a46648f52c4ec5d0547b25 118 Gene3D G3DSA:4.10.910.10 72 118 3.8E-27 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07680 6b74574720a46648f52c4ec5d0547b25 118 SUPERFAMILY SSF46946 2 114 9.29E-46 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 C3Y93_07680 6b74574720a46648f52c4ec5d0547b25 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07680 6b74574720a46648f52c4ec5d0547b25 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.5E-53 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_07680 6b74574720a46648f52c4ec5d0547b25 118 Pfam PF00416 Ribosomal protein S13/S18 3 62 4.8E-14 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07680 6b74574720a46648f52c4ec5d0547b25 118 Pfam PF00416 Ribosomal protein S13/S18 65 108 9.7E-17 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07680 6b74574720a46648f52c4ec5d0547b25 118 PIRSF PIRSF002134 1 118 5.8E-41 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07680 6b74574720a46648f52c4ec5d0547b25 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.073 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_02310 5a2bbbe3e2fa27b0656b3c7210c2409e 530 Pfam PF02690 Na+/Pi-cotransporter 14 153 2.7E-39 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 C3Y93_02310 5a2bbbe3e2fa27b0656b3c7210c2409e 530 Pfam PF02690 Na+/Pi-cotransporter 176 257 1.5E-11 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 C3Y93_10280 fcc8136167daf81ec607065aa3ca9b85 341 SUPERFAMILY SSF51735 1 338 3.04E-96 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_10280 fcc8136167daf81ec607065aa3ca9b85 341 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 325 3.5E-55 T 14-10-2018 IPR016040 NAD(P)-binding domain C3Y93_10280 fcc8136167daf81ec607065aa3ca9b85 341 Gene3D G3DSA:3.90.25.10 195 330 2.1E-138 T 14-10-2018 C3Y93_10280 fcc8136167daf81ec607065aa3ca9b85 341 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 336 1.3E-135 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 C3Y93_10280 fcc8136167daf81ec607065aa3ca9b85 341 Gene3D G3DSA:3.40.50.720 4 275 2.1E-138 T 14-10-2018 C3Y93_10330 393cdbc43dcc3e57d1e405897370dc18 103 Gene3D G3DSA:3.30.300.90 2 90 5.7E-24 T 14-10-2018 C3Y93_10330 393cdbc43dcc3e57d1e405897370dc18 103 Pfam PF01722 BolA-like protein 12 84 4.5E-23 T 14-10-2018 IPR002634 BolA protein C3Y93_10330 393cdbc43dcc3e57d1e405897370dc18 103 PIRSF PIRSF003113 1 98 6.9E-29 T 14-10-2018 IPR002634 BolA protein C3Y93_10330 393cdbc43dcc3e57d1e405897370dc18 103 SUPERFAMILY SSF82657 2 89 2.88E-25 T 14-10-2018 IPR036065 BolA-like superfamily C3Y93_04900 79dcb8707f5acb9c2846a0ef49b8bfa7 69 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 41 5.7E-6 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA C3Y93_09330 928330ee4824f15f2f9dcdcb70626760 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 43 469 8.3E-111 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 C3Y93_09330 928330ee4824f15f2f9dcdcb70626760 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 43 469 3.4E-54 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 C3Y93_09330 928330ee4824f15f2f9dcdcb70626760 471 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 420 436 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 C3Y93_01095 6acff1aa0a16d680797da27c4699dc00 248 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 5.2E-21 T 14-10-2018 IPR025161 Putative transposase IS4/IS5 family C3Y93_01095 6acff1aa0a16d680797da27c4699dc00 248 Pfam PF01609 Transposase DDE domain 87 243 3.2E-21 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3Y93_05680 147faa10c98c2a1a187c10f9120f8f3b 48 Pfam PF08085 Entericidin EcnA/B family 19 39 1.4E-10 T 14-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 C3Y93_02770 9ffa1181ef0233c80bf7e6867085df3b 496 Pfam PF01425 Amidase 27 475 2.5E-79 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C3Y93_02770 9ffa1181ef0233c80bf7e6867085df3b 496 Gene3D G3DSA:3.90.1300.10 4 495 2.0E-151 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C3Y93_02770 9ffa1181ef0233c80bf7e6867085df3b 496 SUPERFAMILY SSF75304 2 484 1.44E-115 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C3Y93_02770 9ffa1181ef0233c80bf7e6867085df3b 496 ProSitePatterns PS00571 Amidases signature. 150 181 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 C3Y93_05820 0e22ad2d6e6954f6a19f9df35f504cd3 573 Pfam PF05552 Conserved TM helix 192 238 5.0E-15 T 14-10-2018 IPR008910 Conserved TM helix C3Y93_05820 0e22ad2d6e6954f6a19f9df35f504cd3 573 Pfam PF05552 Conserved TM helix 102 149 6.8E-16 T 14-10-2018 IPR008910 Conserved TM helix C3Y93_05820 0e22ad2d6e6954f6a19f9df35f504cd3 573 Pfam PF05552 Conserved TM helix 283 331 1.7E-11 T 14-10-2018 IPR008910 Conserved TM helix C3Y93_05820 0e22ad2d6e6954f6a19f9df35f504cd3 573 Pfam PF05552 Conserved TM helix 26 58 2.3E-7 T 14-10-2018 IPR008910 Conserved TM helix C3Y93_04195 c6bbe7abaca233fe363c2006aa7525f7 148 SUPERFAMILY SSF51126 16 120 3.77E-5 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor C3Y93_04195 c6bbe7abaca233fe363c2006aa7525f7 148 Gene3D G3DSA:2.160.20.20 7 143 2.4E-7 T 14-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily C3Y93_00025 b800649337b90f4f5b7ab902f008830e 133 Pfam PF11304 Protein of unknown function (DUF3106) 38 89 1.1E-6 T 14-10-2018 IPR021455 Protein of unknown function DUF3106 C3Y93_12220 0393965fea13b0f7dbe6555ab6c68a38 666 SUPERFAMILY SSF49373 82 157 8.24E-6 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments C3Y93_12220 0393965fea13b0f7dbe6555ab6c68a38 666 Gene3D G3DSA:2.60.40.10 54 158 2.1E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold C3Y93_12220 0393965fea13b0f7dbe6555ab6c68a38 666 Gene3D G3DSA:2.60.40.10 375 469 2.2E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold C3Y93_08275 bf0e8c7281b5208191d470fdf3275b36 174 Pfam PF04351 Pilus assembly protein, PilP 27 169 1.1E-43 T 14-10-2018 IPR007446 Pilus assembly protein PilP C3Y93_08275 bf0e8c7281b5208191d470fdf3275b36 174 Gene3D G3DSA:2.30.30.830 77 170 7.0E-29 T 14-10-2018 C3Y93_08275 bf0e8c7281b5208191d470fdf3275b36 174 PIRSF PIRSF016481 1 171 5.1E-37 T 14-10-2018 IPR007446 Pilus assembly protein PilP C3Y93_07560 d5527f49a44ec9382b5c047ad22162c8 155 Pfam PF03724 META domain 38 148 1.5E-23 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ C3Y93_07560 d5527f49a44ec9382b5c047ad22162c8 155 Gene3D G3DSA:2.40.128.270 34 152 1.2E-21 T 14-10-2018 IPR038670 HslJ-like superfamily C3Y93_14185 61b1573b6f69835ebef96f409850a9da 103 Pfam PF01527 Transposase 46 97 4.5E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 C3Y93_14185 61b1573b6f69835ebef96f409850a9da 103 SUPERFAMILY SSF48295 44 102 2.77E-13 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 C3Y93_11430 4437b63c5b811a6125c5901c8a3787cd 457 Pfam PF13476 AAA domain 6 260 3.7E-9 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain C3Y93_11430 4437b63c5b811a6125c5901c8a3787cd 457 Gene3D G3DSA:3.40.50.300 1 379 7.9E-17 T 14-10-2018 C3Y93_11430 4437b63c5b811a6125c5901c8a3787cd 457 SUPERFAMILY SSF52540 1 373 1.61E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_12135 57c122cbfe328f12dc9350200dbd740c 658 Gene3D G3DSA:1.25.20.10 34 395 1.0E-58 T 14-10-2018 C3Y93_12135 57c122cbfe328f12dc9350200dbd740c 658 Pfam PF01464 Transglycosylase SLT domain 499 604 4.9E-22 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C3Y93_12135 57c122cbfe328f12dc9350200dbd740c 658 SUPERFAMILY SSF53955 490 650 2.52E-44 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C3Y93_12135 57c122cbfe328f12dc9350200dbd740c 658 SUPERFAMILY SSF48435 37 488 1.83E-88 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 C3Y93_12135 57c122cbfe328f12dc9350200dbd740c 658 Gene3D G3DSA:1.10.530.10 486 651 5.7E-43 T 14-10-2018 C3Y93_08665 eab425d76808a23a2fb04a09df548f65 985 SUPERFAMILY SSF56349 486 644 1.18E-10 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3Y93_08665 eab425d76808a23a2fb04a09df548f65 985 Gene3D G3DSA:1.10.443.10 486 716 1.6E-13 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C3Y93_08665 eab425d76808a23a2fb04a09df548f65 985 Pfam PF00589 Phage integrase family 491 644 7.7E-9 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C3Y93_06560 4e1fe07fbeb98848eb3666df12c7900e 307 PRINTS PR01805 VacJ lipoprotein signature 97 113 1.8E-17 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C3Y93_06560 4e1fe07fbeb98848eb3666df12c7900e 307 PRINTS PR01805 VacJ lipoprotein signature 183 200 1.8E-17 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C3Y93_06560 4e1fe07fbeb98848eb3666df12c7900e 307 PRINTS PR01805 VacJ lipoprotein signature 148 165 1.8E-17 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C3Y93_06560 4e1fe07fbeb98848eb3666df12c7900e 307 PRINTS PR01805 VacJ lipoprotein signature 80 93 1.8E-17 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C3Y93_06560 4e1fe07fbeb98848eb3666df12c7900e 307 Pfam PF04333 MlaA lipoprotein 79 269 1.4E-59 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C3Y93_05665 c3aedde1e67f8366f44e40575816174a 174 SUPERFAMILY SSF141523 7 160 5.89E-23 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like C3Y93_05665 c3aedde1e67f8366f44e40575816174a 174 Gene3D G3DSA:2.40.440.10 4 170 2.3E-23 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like C3Y93_05665 c3aedde1e67f8366f44e40575816174a 174 Pfam PF03734 L,D-transpeptidase catalytic domain 10 160 3.7E-17 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 C3Y93_13990 deab5c5dfbfb643f3a08a8a1f2e9fa7f 155 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 21 149 2.3E-45 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 C3Y93_13990 deab5c5dfbfb643f3a08a8a1f2e9fa7f 155 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 4 150 27.643 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 C3Y93_07200 48c1ef55c693049d8ff4a10513d42098 274 Pfam PF14136 Domain of unknown function (DUF4303) 8 164 3.8E-8 T 14-10-2018 IPR025409 Protein of unknown function DUF4303 C3Y93_12150 bed13c8f88c93a94992f5242984d3dc5 403 Pfam PF04143 Sulphur transport 53 380 3.3E-82 T 14-10-2018 IPR007272 Sulphur transport domain C3Y93_07085 910c9af45e38ccb0df5e38947ddb5f59 296 Pfam PF06258 Mitochondrial fission ELM1 11 292 3.7E-59 T 14-10-2018 IPR009367 Mitochondrial fission protein ELM1-like C3Y93_04405 ca0ec63999e0d087affa82e2f82401ed 172 SUPERFAMILY SSF48452 80 169 1.11E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_04405 ca0ec63999e0d087affa82e2f82401ed 172 Gene3D G3DSA:1.25.40.10 44 172 3.5E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_12280 86b9a56926b8c7daf8b26d118ad6ef6d 203 Pfam PF04279 Intracellular septation protein A 1 201 2.6E-46 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 C3Y93_12280 86b9a56926b8c7daf8b26d118ad6ef6d 203 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 202 15.714 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 C3Y93_10065 690278d8124b555e3cf77bd0783495ac 129 Pfam PF05717 IS66 Orf2 like protein 24 120 1.8E-30 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C3Y93_08255 bb38f08ca0d8ac9587c539f496aa8449 281 Gene3D G3DSA:3.30.70.1070 84 184 5.7E-9 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C3Y93_00150 ce37d45dd2db0de8232b2e8d03eecdc2 248 Gene3D G3DSA:2.40.160.170 23 248 7.7E-80 T 14-10-2018 C3Y93_00150 ce37d45dd2db0de8232b2e8d03eecdc2 248 SUPERFAMILY SSF56925 41 248 2.62E-7 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel C3Y93_06405 dffc9855d282a81e655287f5b4e6a88d 94 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 92 4.7E-18 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 C3Y93_06405 dffc9855d282a81e655287f5b4e6a88d 94 Gene3D G3DSA:3.30.310.50 1 94 1.1E-22 T 14-10-2018 C3Y93_06680 f0431af1206a9378e3b8992d98edb4d4 64 SUPERFAMILY SSF143034 3 63 3.79E-21 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_06680 f0431af1206a9378e3b8992d98edb4d4 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 3 63 7.7E-25 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C3Y93_06680 f0431af1206a9378e3b8992d98edb4d4 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 16.361 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C3Y93_06680 f0431af1206a9378e3b8992d98edb4d4 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_06680 f0431af1206a9378e3b8992d98edb4d4 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.1E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C3Y93_06680 f0431af1206a9378e3b8992d98edb4d4 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 7.1E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C3Y93_06680 f0431af1206a9378e3b8992d98edb4d4 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 7.1E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C3Y93_06680 f0431af1206a9378e3b8992d98edb4d4 64 Gene3D G3DSA:2.40.50.530 4 63 5.0E-21 T 14-10-2018 C3Y93_06680 f0431af1206a9378e3b8992d98edb4d4 64 Pfam PF01632 Ribosomal protein L35 3 60 2.5E-22 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C3Y93_08545 419c02c7960a94209034f9f8d3deba99 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 153 1.4E-56 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3Y93_08545 419c02c7960a94209034f9f8d3deba99 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 152 9.6E-53 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3Y93_08545 419c02c7960a94209034f9f8d3deba99 156 SUPERFAMILY SSF52121 11 156 2.22E-60 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3Y93_08545 419c02c7960a94209034f9f8d3deba99 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 156 30.912 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3Y93_08545 419c02c7960a94209034f9f8d3deba99 156 Gene3D G3DSA:3.40.50.960 3 156 4.6E-59 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C3Y93_06615 f7b0a8a3d2951ea959aff2476af02f54 189 Pfam PF02325 YGGT family 108 177 5.7E-16 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 C3Y93_03785 5ca4fa36036c5c67c2e6279e50a891b5 278 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 8 277 74.806 T 14-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein C3Y93_03785 5ca4fa36036c5c67c2e6279e50a891b5 278 Pfam PF03618 Kinase/pyrophosphorylase 11 268 2.3E-75 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 C3Y93_12465 790bf1cb46acbdaebe9b2d13a51d4f08 217 SUPERFAMILY SSF47616 91 207 1.71E-15 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C3Y93_12465 790bf1cb46acbdaebe9b2d13a51d4f08 217 SUPERFAMILY SSF52833 7 87 1.42E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_12465 790bf1cb46acbdaebe9b2d13a51d4f08 217 Gene3D G3DSA:3.40.30.10 11 203 2.8E-58 T 14-10-2018 C3Y93_12465 790bf1cb46acbdaebe9b2d13a51d4f08 217 Gene3D G3DSA:1.20.1050.10 87 195 2.8E-58 T 14-10-2018 C3Y93_12465 790bf1cb46acbdaebe9b2d13a51d4f08 217 Pfam PF02798 Glutathione S-transferase, N-terminal domain 11 78 1.3E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C3Y93_12825 32b03e46f6b84e4528684acf8da208ee 399 Gene3D G3DSA:3.10.290.10 1 58 3.7E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C3Y93_12825 32b03e46f6b84e4528684acf8da208ee 399 Pfam PF01479 S4 domain 4 48 3.8E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_12825 32b03e46f6b84e4528684acf8da208ee 399 SUPERFAMILY SSF55174 5 95 4.71E-17 T 14-10-2018 C3Y93_12825 32b03e46f6b84e4528684acf8da208ee 399 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 231 2.2E-51 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 C3Y93_12825 32b03e46f6b84e4528684acf8da208ee 399 Pfam PF00849 RNA pseudouridylate synthase 67 199 1.8E-15 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_12825 32b03e46f6b84e4528684acf8da208ee 399 Gene3D G3DSA:3.30.70.580 68 235 4.6E-48 T 14-10-2018 C3Y93_12825 32b03e46f6b84e4528684acf8da208ee 399 SMART SM00363 3 64 2.7E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_12825 32b03e46f6b84e4528684acf8da208ee 399 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 C3Y93_12825 32b03e46f6b84e4528684acf8da208ee 399 SUPERFAMILY SSF55120 66 235 8.92E-41 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C3Y93_12825 32b03e46f6b84e4528684acf8da208ee 399 Gene3D G3DSA:3.30.70.1560 134 217 4.6E-48 T 14-10-2018 C3Y93_09730 a6877143b93e89278605aac79742db5b 335 Gene3D G3DSA:3.40.190.170 56 251 4.3E-12 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily C3Y93_03960 754d32a75b0ecef62105085caa67c163 300 Gene3D G3DSA:1.25.40.10 185 298 1.6E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_03960 754d32a75b0ecef62105085caa67c163 300 SUPERFAMILY SSF48452 193 290 2.47E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C3Y93_01910 5842c1eb0effad6c9b2947b6599948b2 274 Pfam PF01148 Cytidylyltransferase family 3 265 1.1E-60 T 14-10-2018 C3Y93_01910 5842c1eb0effad6c9b2947b6599948b2 274 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 225 251 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 C3Y93_07870 8a23b964dd2aed306d711a28025d3c16 200 SUPERFAMILY SSF102405 2 179 3.66E-57 T 14-10-2018 C3Y93_07870 8a23b964dd2aed306d711a28025d3c16 200 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 3 179 2.1E-59 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG C3Y93_07870 8a23b964dd2aed306d711a28025d3c16 200 Pfam PF03641 Possible lysine decarboxylase 46 174 4.9E-39 T 14-10-2018 IPR031100 LOG family C3Y93_07870 8a23b964dd2aed306d711a28025d3c16 200 Gene3D G3DSA:3.40.50.450 1 192 2.0E-70 T 14-10-2018 C3Y93_09310 ffdf206458839818f5da3a3d62e91201 180 SUPERFAMILY SSF48403 9 139 1.13E-8 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily C3Y93_09310 ffdf206458839818f5da3a3d62e91201 180 Gene3D G3DSA:1.25.40.20 2 179 7.9E-13 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily C3Y93_10305 c85d6c02d196e569e37f5618d9c9d2a5 87 Gene3D G3DSA:3.30.2310.20 4 87 1.3E-41 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C3Y93_10305 c85d6c02d196e569e37f5618d9c9d2a5 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 8 87 9.5E-42 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 C3Y93_10305 c85d6c02d196e569e37f5618d9c9d2a5 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 8 87 3.9E-36 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 C3Y93_10305 c85d6c02d196e569e37f5618d9c9d2a5 87 SUPERFAMILY SSF143011 6 86 1.57E-28 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C3Y93_09550 0e5734eccc7827e39fa07412efc0a8ea 179 Gene3D G3DSA:2.70.70.10 33 179 1.2E-42 T 14-10-2018 IPR011055 Duplicated hybrid motif C3Y93_09550 0e5734eccc7827e39fa07412efc0a8ea 179 SUPERFAMILY SSF51261 47 178 9.94E-31 T 14-10-2018 IPR011055 Duplicated hybrid motif C3Y93_09550 0e5734eccc7827e39fa07412efc0a8ea 179 Pfam PF01551 Peptidase family M23 73 167 2.6E-21 T 14-10-2018 IPR016047 Peptidase M23 C3Y93_06435 e7cbc8ba26e639fbde80373716a34ece 274 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 258 6.4E-73 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 C3Y93_06435 e7cbc8ba26e639fbde80373716a34ece 274 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 267 17.368 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 C3Y93_06435 e7cbc8ba26e639fbde80373716a34ece 274 Pfam PF02673 Bacitracin resistance protein BacA 9 262 2.0E-80 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 C3Y93_00195 b1b908badd6e9344a86057b3b0a0879b 354 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 26 350 1.0E-83 T 14-10-2018 IPR003770 Endolytic murein transglycosylase C3Y93_00195 b1b908badd6e9344a86057b3b0a0879b 354 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 25 348 31.981 T 14-10-2018 IPR003770 Endolytic murein transglycosylase C3Y93_00195 b1b908badd6e9344a86057b3b0a0879b 354 Pfam PF02618 YceG-like family 57 342 1.2E-77 T 14-10-2018 IPR003770 Endolytic murein transglycosylase C3Y93_00195 b1b908badd6e9344a86057b3b0a0879b 354 Gene3D G3DSA:3.30.160.60 316 352 1.6E-18 T 14-10-2018 C3Y93_09180 930de9886e39334e5f3b1d8047108f33 191 Pfam PF01169 Uncharacterized protein family UPF0016 6 80 4.8E-18 T 14-10-2018 IPR001727 Gdt1 family C3Y93_09180 930de9886e39334e5f3b1d8047108f33 191 Pfam PF01169 Uncharacterized protein family UPF0016 107 181 3.3E-24 T 14-10-2018 IPR001727 Gdt1 family C3Y93_08035 264fb3c516266a8300d73d5982cf7faa 98 Pfam PF12823 Domain of unknown function (DUF3817) 4 90 1.4E-25 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane C3Y93_08035 264fb3c516266a8300d73d5982cf7faa 98 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 6 89 6.1E-32 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane C3Y93_07720 66a73a42654038c7e184ed447db917b4 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 30.787 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07720 66a73a42654038c7e184ed447db917b4 131 SUPERFAMILY SSF56047 2 130 6.41E-47 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07720 66a73a42654038c7e184ed447db917b4 131 Gene3D G3DSA:3.30.1490.10 74 130 2.3E-21 T 14-10-2018 C3Y93_07720 66a73a42654038c7e184ed447db917b4 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07720 66a73a42654038c7e184ed447db917b4 131 Pfam PF00410 Ribosomal protein S8 5 130 8.3E-49 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07720 66a73a42654038c7e184ed447db917b4 131 Gene3D G3DSA:3.30.1370.30 2 73 2.2E-29 T 14-10-2018 C3Y93_08300 4e792d29f0b65b2199123aa2512d0925 267 SUPERFAMILY SSF53335 6 250 2.05E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_08300 4e792d29f0b65b2199123aa2512d0925 267 Pfam PF08241 Methyltransferase domain 88 172 7.8E-11 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C3Y93_08300 4e792d29f0b65b2199123aa2512d0925 267 Gene3D G3DSA:3.40.50.150 3 267 7.3E-70 T 14-10-2018 C3Y93_08300 4e792d29f0b65b2199123aa2512d0925 267 PIRSF PIRSF018249 1 267 6.3E-85 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 C3Y93_14020 806300e0c7be48757f63985c94a7569c 329 PIRSF PIRSF026649 1 292 6.0E-72 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C3Y93_14020 806300e0c7be48757f63985c94a7569c 329 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 18 285 4.0E-42 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C3Y93_10840 356a811c41b9a9b1a70a34548a8029f3 181 Pfam PF09335 SNARE associated Golgi protein 43 168 1.9E-20 T 14-10-2018 IPR032816 SNARE associated Golgi protein C3Y93_11325 45c2f321986b5fd42c669855dfd035e9 309 SUPERFAMILY SSF103481 44 140 1.83E-10 T 14-10-2018 C3Y93_11325 45c2f321986b5fd42c669855dfd035e9 309 Pfam PF00892 EamA-like transporter family 155 285 3.3E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_11325 45c2f321986b5fd42c669855dfd035e9 309 Pfam PF00892 EamA-like transporter family 10 141 3.4E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C3Y93_04540 86675b6290f69e411671ddd511029d22 232 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 188 213 1.0E-4 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor C3Y93_04540 86675b6290f69e411671ddd511029d22 232 SUPERFAMILY SSF53098 3 196 3.16E-22 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_04540 86675b6290f69e411671ddd511029d22 232 Gene3D G3DSA:3.30.420.10 3 186 6.9E-21 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_04540 86675b6290f69e411671ddd511029d22 232 Pfam PF00929 Exonuclease 4 161 1.6E-4 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3Y93_04540 86675b6290f69e411671ddd511029d22 232 SMART SM00479 2 170 1.8E-4 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C3Y93_12980 ee0f8ee76649c25966f95df4dc1bb795 153 SUPERFAMILY SSF117782 57 143 7.46E-25 T 14-10-2018 IPR035439 UPF0145 domain superfamily C3Y93_12980 ee0f8ee76649c25966f95df4dc1bb795 153 Pfam PF01906 Putative heavy-metal-binding 58 143 3.6E-24 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 C3Y93_12980 ee0f8ee76649c25966f95df4dc1bb795 153 Gene3D G3DSA:3.30.110.70 45 146 9.4E-25 T 14-10-2018 C3Y93_08925 8115b825f35265510df96bb27800eff5 100 Gene3D G3DSA:3.40.120.10 2 83 7.6E-24 T 14-10-2018 C3Y93_08925 8115b825f35265510df96bb27800eff5 100 SUPERFAMILY SSF53738 2 81 5.1E-22 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_08925 8115b825f35265510df96bb27800eff5 100 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 81 1.1E-22 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C3Y93_03680 b64019aeb86e4bd12363444516aa0b39 1503 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1156 1503 1.1E-42 T 14-10-2018 IPR007452 Translocation and assembly module TamB C3Y93_12880 68d1dc38bd5c1b5ff2c71759b977b3cf 103 SUPERFAMILY SSF54637 1 41 9.69E-6 T 14-10-2018 IPR029069 HotDog domain superfamily C3Y93_12880 68d1dc38bd5c1b5ff2c71759b977b3cf 103 Pfam PF13622 Thioesterase-like superfamily 1 67 1.0E-8 T 14-10-2018 C3Y93_12880 68d1dc38bd5c1b5ff2c71759b977b3cf 103 Gene3D G3DSA:3.10.129.90 1 96 5.4E-14 T 14-10-2018 C3Y93_03780 73a0b6ee536c5af3815b3cdf93fd18d7 184 SUPERFAMILY SSF51905 20 182 7.66E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_13365 4966e6b79821f66007763e13b3e162dc 160 SUPERFAMILY SSF58113 15 143 2.88E-7 T 14-10-2018 C3Y93_13365 4966e6b79821f66007763e13b3e162dc 160 Gene3D G3DSA:1.20.5.1230 6 154 1.0E-6 T 14-10-2018 C3Y93_13725 57e044ceabed92d90c9e59aea337951f 88 ProDom PD004249 MONOOXYGENASE COMPONENT HYDROXYLASE MMOB/DMPM PHENOL SUBUNIT 3D-STRUCTURE HYDROCARBONS IRON PHENOLHYDROXYLASE 8 86 2.0E-37 T 14-10-2018 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 C3Y93_13725 57e044ceabed92d90c9e59aea337951f 88 Gene3D G3DSA:3.90.56.10 1 88 2.6E-34 T 14-10-2018 IPR036889 Monooxygenase component MmoB/DmpM superfamily GO:0004497|GO:0006725 C3Y93_13725 57e044ceabed92d90c9e59aea337951f 88 Pfam PF02406 MmoB/DmpM family 3 86 1.3E-28 T 14-10-2018 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 C3Y93_13725 57e044ceabed92d90c9e59aea337951f 88 SUPERFAMILY SSF56029 3 88 1.83E-30 T 14-10-2018 IPR036889 Monooxygenase component MmoB/DmpM superfamily GO:0004497|GO:0006725 C3Y93_06000 9586ee80add327cea084e78bef356361 168 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 23 164 1.6E-23 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 C3Y93_06000 9586ee80add327cea084e78bef356361 168 Pfam PF04093 rod shape-determining protein MreD 23 165 6.0E-13 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 C3Y93_03240 771b8ffa620fcb23c16a1ba0c2134280 149 Pfam PF13673 Acetyltransferase (GNAT) domain 22 137 1.7E-14 T 14-10-2018 IPR000182 GNAT domain C3Y93_03240 771b8ffa620fcb23c16a1ba0c2134280 149 SUPERFAMILY SSF55729 15 142 2.49E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3Y93_03240 771b8ffa620fcb23c16a1ba0c2134280 149 Gene3D G3DSA:3.40.630.30 2 145 6.7E-35 T 14-10-2018 C3Y93_08990 5d72b2625909e4c626746efb62b6f5d0 88 SUPERFAMILY SSF47598 5 82 2.67E-16 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C3Y93_08990 5d72b2625909e4c626746efb62b6f5d0 88 Pfam PF08681 Protein of unknown function (DUF1778) 8 83 1.8E-18 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 C3Y93_08990 5d72b2625909e4c626746efb62b6f5d0 88 Gene3D G3DSA:1.20.5.780 2 87 2.0E-19 T 14-10-2018 C3Y93_02325 0d66360126a6697603cfe573d7460a2c 138 Pfam PF04143 Sulphur transport 37 131 1.6E-7 T 14-10-2018 IPR007272 Sulphur transport domain C3Y93_05620 9912c6263a992db97a185b221c5b2f16 153 Pfam PF11042 Protein of unknown function (DUF2750) 24 124 8.6E-23 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 C3Y93_06970 39119ab0604399548105425dd9ec2be3 169 PIRSF PIRSF029598 5 148 4.7E-35 T 14-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 C3Y93_06970 39119ab0604399548105425dd9ec2be3 169 Pfam PF06146 Phosphate-starvation-inducible E 62 130 4.7E-17 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like C3Y93_13775 218e8d441634ea4ef0f94bf736312f4f 273 Pfam PF05675 Protein of unknown function (DUF817) 11 247 4.4E-83 T 14-10-2018 IPR008535 Protein of unknown function DUF817 C3Y93_13775 218e8d441634ea4ef0f94bf736312f4f 273 PIRSF PIRSF009141 1 267 2.2E-74 T 14-10-2018 IPR008535 Protein of unknown function DUF817 C3Y93_02930 fae61ffd74c1e7c55720ae8820cfcf40 495 Pfam PF06074 Protein of unknown function (DUF935) 57 489 1.3E-52 T 14-10-2018 IPR009279 Protein of unknown function DUF935 C3Y93_06170 01e6d70b1c049d0bde5b154bb94db7bc 1203 Gene3D G3DSA:3.40.50.300 968 1203 4.5E-24 T 14-10-2018 C3Y93_06170 01e6d70b1c049d0bde5b154bb94db7bc 1203 Gene3D G3DSA:3.40.50.300 1 311 1.5E-38 T 14-10-2018 C3Y93_06170 01e6d70b1c049d0bde5b154bb94db7bc 1203 Pfam PF13555 P-loop containing region of AAA domain 26 55 1.5E-6 T 14-10-2018 C3Y93_06170 01e6d70b1c049d0bde5b154bb94db7bc 1203 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1105 1161 1.2E-10 T 14-10-2018 C3Y93_06170 01e6d70b1c049d0bde5b154bb94db7bc 1203 SUPERFAMILY SSF52540 16 1181 4.07E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_02130 982993237b1d3e064d0c9c14faff23a7 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.8E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_02130 982993237b1d3e064d0c9c14faff23a7 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.8E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_02130 982993237b1d3e064d0c9c14faff23a7 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.8E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_02130 982993237b1d3e064d0c9c14faff23a7 90 Gene3D G3DSA:4.10.520.10 1 90 4.4E-38 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C3Y93_02130 982993237b1d3e064d0c9c14faff23a7 90 SMART SM00411 1 90 3.2E-46 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_02130 982993237b1d3e064d0c9c14faff23a7 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 C3Y93_02130 982993237b1d3e064d0c9c14faff23a7 90 SUPERFAMILY SSF47729 1 89 2.94E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C3Y93_02130 982993237b1d3e064d0c9c14faff23a7 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 9.3E-35 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C3Y93_09800 f301dbe0ba3bdb11a4507b080201ffcd 384 Pfam PF07690 Major Facilitator Superfamily 3 279 1.8E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_09800 f301dbe0ba3bdb11a4507b080201ffcd 384 SUPERFAMILY SSF103473 2 378 2.49E-36 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_09800 f301dbe0ba3bdb11a4507b080201ffcd 384 Gene3D G3DSA:1.20.1250.20 197 380 1.9E-9 T 14-10-2018 C3Y93_09800 f301dbe0ba3bdb11a4507b080201ffcd 384 Gene3D G3DSA:1.20.1250.20 1 182 4.9E-18 T 14-10-2018 C3Y93_11520 5777f09e1d8cab13eaaaa9318b5ce71b 153 Gene3D G3DSA:2.40.128.520 27 153 3.8E-14 T 14-10-2018 C3Y93_11520 5777f09e1d8cab13eaaaa9318b5ce71b 153 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 30 152 1.0E-22 T 14-10-2018 IPR019223 Domain of unknown function DUF2147 C3Y93_10350 d9f38a28d2f95a83096f196245ddafc8 196 Pfam PF01810 LysE type translocator 13 187 1.6E-6 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 C3Y93_04645 bc8f94d0a7e92dc2422fef5289b03e64 198 Gene3D G3DSA:1.10.3540.10 2 197 1.6E-45 T 14-10-2018 C3Y93_04645 bc8f94d0a7e92dc2422fef5289b03e64 198 Pfam PF08849 Putative inner membrane protein (DUF1819) 15 179 2.7E-30 T 14-10-2018 IPR014948 Protein of unknown function DUF1819, putative inner membrane C3Y93_01540 d3e94d2adcb6d3738f7394d30a3e5310 393 SUPERFAMILY SSF46894 224 285 3.12E-5 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C3Y93_01540 d3e94d2adcb6d3738f7394d30a3e5310 393 Gene3D G3DSA:3.30.450.40 25 207 2.9E-37 T 14-10-2018 IPR029016 GAF-like domain superfamily C3Y93_04635 c3b664ab934d962eb503138c564bb0e8 1247 SUPERFAMILY SSF52540 58 313 6.41E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_03465 64d45f3e4f25f387b8d743f2ff649f22 177 Pfam PF04970 Lecithin retinol acyltransferase 8 108 1.9E-16 T 14-10-2018 IPR007053 LRAT-like domain C3Y93_04275 92406bbe5303011e684216f2d1a0f829 206 Gene3D G3DSA:3.20.20.70 2 198 7.5E-48 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_04275 92406bbe5303011e684216f2d1a0f829 206 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 4 186 1.1E-45 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C3Y93_04275 92406bbe5303011e684216f2d1a0f829 206 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 1 203 20.462 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C3Y93_04275 92406bbe5303011e684216f2d1a0f829 206 SUPERFAMILY SSF51391 3 187 2.62E-49 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C3Y93_04275 92406bbe5303011e684216f2d1a0f829 206 Pfam PF02581 Thiamine monophosphate synthase 4 183 1.4E-49 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C3Y93_12630 ec17a19968b42d079e610035467cf425 456 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 368 388 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 C3Y93_12630 ec17a19968b42d079e610035467cf425 456 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 27 450 4.9E-120 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 C3Y93_12630 ec17a19968b42d079e610035467cf425 456 Pfam PF00860 Permease family 29 420 4.6E-96 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 C3Y93_12630 ec17a19968b42d079e610035467cf425 456 TIGRFAM TIGR03173 pbuX: xanthine permease 33 452 1.9E-127 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 C3Y93_00650 baf09822ba88fa9ce3dcfc5215650d15 427 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 420 7.0E-34 T 14-10-2018 IPR010352 Protein of unknown function DUF945 C3Y93_08080 5e776585940436e9872c81edaafb2426 326 SUPERFAMILY SSF53474 42 298 3.81E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_08080 5e776585940436e9872c81edaafb2426 326 Gene3D G3DSA:3.40.50.1820 40 326 1.5E-71 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_08080 5e776585940436e9872c81edaafb2426 326 Pfam PF00561 alpha/beta hydrolase fold 48 178 1.8E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C3Y93_07040 06be8e1ea7d71802efbd4b725b0c6667 91 SUPERFAMILY SSF53448 4 89 8.84E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_07040 06be8e1ea7d71802efbd4b725b0c6667 91 Gene3D G3DSA:3.90.550.10 1 91 2.2E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_07040 06be8e1ea7d71802efbd4b725b0c6667 91 Pfam PF00535 Glycosyl transferase family 2 6 89 1.9E-18 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C3Y93_10210 59523da8c2cbf5b92ebb533a53c3b656 317 Gene3D G3DSA:3.30.370.20 8 84 1.1E-6 T 14-10-2018 C3Y93_10210 59523da8c2cbf5b92ebb533a53c3b656 317 Pfam PF07922 Glycosyltransferase family 52 35 288 2.1E-21 T 14-10-2018 IPR012477 Glycosyltransferase family 52 C3Y93_09965 2dd7ab89efcb77abf3e9df2693512f96 36 Pfam PF16951 Putative methionine and alanine importer, small subunit 1 33 1.3E-11 T 14-10-2018 IPR031596 Putative methionine and alanine importer, small subunit C3Y93_13780 dd71efd48f96b2aa8784808281ee69c5 156 Pfam PF11220 Protein of unknown function (DUF3015) 19 155 4.4E-41 T 14-10-2018 IPR021383 Protein of unknown function DUF3015 C3Y93_01685 c272be8a18ced5a04588ce0fffe10174 329 SUPERFAMILY SSF52540 11 214 4.32E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_01685 c272be8a18ced5a04588ce0fffe10174 329 Gene3D G3DSA:3.40.50.300 8 172 1.6E-44 T 14-10-2018 C3Y93_01685 c272be8a18ced5a04588ce0fffe10174 329 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 216 317 1.3E-5 T 14-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C3Y93_01685 c272be8a18ced5a04588ce0fffe10174 329 Pfam PF13177 DNA polymerase III, delta subunit 26 173 8.6E-37 T 14-10-2018 C3Y93_02900 9baa5dc2e316851d1b7a2055af97d529 357 Pfam PF03864 Phage major capsid protein E 20 353 4.9E-47 T 14-10-2018 IPR005564 Major capsid protein GpE C3Y93_02900 9baa5dc2e316851d1b7a2055af97d529 357 Gene3D G3DSA:3.15.30.10 38 345 7.6E-43 T 14-10-2018 C3Y93_02900 9baa5dc2e316851d1b7a2055af97d529 357 Gene3D G3DSA:3.30.1930.10 176 298 7.6E-43 T 14-10-2018 C3Y93_09990 e435b52a02ce41a2ec869bb1c9d562a6 425 SUPERFAMILY SSF52833 241 422 2.1E-7 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C3Y93_05935 fe2ea2a86c4e58228d407369d33f8199 303 Gene3D G3DSA:1.10.600.10 6 300 5.9E-84 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C3Y93_05935 fe2ea2a86c4e58228d407369d33f8199 303 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 221 233 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site C3Y93_05935 fe2ea2a86c4e58228d407369d33f8199 303 Pfam PF00348 Polyprenyl synthetase 36 272 3.8E-56 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 C3Y93_05935 fe2ea2a86c4e58228d407369d33f8199 303 SUPERFAMILY SSF48576 14 289 1.51E-77 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C3Y93_08210 213552cc9d0ce1f5d7d9554459099cac 233 Pfam PF03400 IS1 transposase 104 220 5.1E-25 T 14-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 C3Y93_08210 213552cc9d0ce1f5d7d9554459099cac 233 Pfam PF03811 InsA N-terminal domain 4 36 2.4E-6 T 14-10-2018 IPR003220 InsA N-terminal domain GO:0006313 C3Y93_03700 9ae5930cb7f254396a25a713c5c21146 145 Gene3D G3DSA:3.30.70.560 6 136 4.8E-11 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C3Y93_03700 9ae5930cb7f254396a25a713c5c21146 145 SUPERFAMILY SSF55083 8 130 1.83E-13 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C3Y93_03700 9ae5930cb7f254396a25a713c5c21146 145 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 10 127 1.2E-10 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C3Y93_02385 c60f36b201adbd9eb54789d473b9eb28 115 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 39 87 5.0E-13 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 C3Y93_02385 c60f36b201adbd9eb54789d473b9eb28 115 SUPERFAMILY SSF69118 3 108 2.09E-28 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 C3Y93_02385 c60f36b201adbd9eb54789d473b9eb28 115 Gene3D G3DSA:1.20.1290.10 1 114 1.0E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 C3Y93_02385 c60f36b201adbd9eb54789d473b9eb28 115 Pfam PF02627 Carboxymuconolactone decarboxylase family 22 104 1.9E-20 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 C3Y93_00680 c0cce0d18ad075c608b8465adf3c8599 289 Gene3D G3DSA:1.20.1270.180 176 286 4.0E-7 T 14-10-2018 C3Y93_00680 c0cce0d18ad075c608b8465adf3c8599 289 Pfam PF07007 Lysozyme inhibitor LprI 207 280 1.8E-8 T 14-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal C3Y93_02040 3bb7527b942bebeff915ddb60ec95302 221 Pfam PF13460 NAD(P)H-binding 12 203 5.4E-7 T 14-10-2018 IPR016040 NAD(P)-binding domain C3Y93_02040 3bb7527b942bebeff915ddb60ec95302 221 SUPERFAMILY SSF51735 5 212 5.2E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C3Y93_02040 3bb7527b942bebeff915ddb60ec95302 221 Gene3D G3DSA:3.40.50.720 1 221 3.5E-47 T 14-10-2018 C3Y93_05800 629a4b9cd7e8f4d5d6291b7648ca5eb5 540 Gene3D G3DSA:3.50.50.60 441 526 7.3E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_05800 629a4b9cd7e8f4d5d6291b7648ca5eb5 540 Gene3D G3DSA:3.50.50.60 1 134 5.8E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_05800 629a4b9cd7e8f4d5d6291b7648ca5eb5 540 Gene3D G3DSA:3.50.50.60 158 360 7.5E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_05800 629a4b9cd7e8f4d5d6291b7648ca5eb5 540 Pfam PF06100 MCRA family 15 509 9.1E-186 T 14-10-2018 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 C3Y93_05800 629a4b9cd7e8f4d5d6291b7648ca5eb5 540 SUPERFAMILY SSF51905 16 251 1.89E-12 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C3Y93_05885 7ead35af7544d9c2651ed629dc2873e7 173 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 160 1.4E-31 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05885 7ead35af7544d9c2651ed629dc2873e7 173 Gene3D G3DSA:1.20.120.1200 1 163 7.8E-45 T 14-10-2018 C3Y93_02940 63f240cfecfebb794d5dadfe47bb220a 158 Pfam PF10045 Uncharacterized conserved protein (DUF2280) 1 102 3.8E-37 T 14-10-2018 IPR018738 Protein of unknown function DUF2280 C3Y93_01070 210ff3740bc5ddf0c740b1a8ea84598c 248 Pfam PF01609 Transposase DDE domain 87 243 3.1E-21 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C3Y93_01070 210ff3740bc5ddf0c740b1a8ea84598c 248 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 2.8E-20 T 14-10-2018 IPR025161 Putative transposase IS4/IS5 family C3Y93_14000 9018250c8ccce2d01ead7a7e97ea4bc6 187 Pfam PF07238 PilZ domain 109 182 5.3E-7 T 14-10-2018 IPR009875 PilZ domain GO:0035438 C3Y93_06885 80ac81df9039f909f12c1d5c4371b66b 330 Pfam PF10974 Protein of unknown function (DUF2804) 7 329 4.2E-66 T 14-10-2018 IPR021243 Protein of unknown function DUF2804 C3Y93_07890 dfc985ebcd37f10da8bf1012d1600223 225 Pfam PF02470 MlaD protein 38 164 1.7E-30 T 14-10-2018 IPR003399 Mce/MlaD C3Y93_14085 9ce131133e95ea9ad9db72ddcc8c41c7 100 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 91 1.3E-8 T 14-10-2018 IPR009241 Toxin HigB-like C3Y93_14085 9ce131133e95ea9ad9db72ddcc8c41c7 100 PIRSF PIRSF028744 1 100 2.5E-42 T 14-10-2018 IPR014056 Addiction module killer protein, predicted C3Y93_14085 9ce131133e95ea9ad9db72ddcc8c41c7 100 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 95 2.1E-40 T 14-10-2018 IPR014056 Addiction module killer protein, predicted C3Y93_07170 4dd151cbb86cc6decc5c789c39a265e5 99 Gene3D G3DSA:3.30.40.60 9 98 1.3E-11 T 14-10-2018 C3Y93_07170 4dd151cbb86cc6decc5c789c39a265e5 99 Pfam PF01844 HNH endonuclease 22 68 1.2E-4 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 C3Y93_07725 f00afc62f4427691c0cb0d1dc154e66d 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C3Y93_07725 f00afc62f4427691c0cb0d1dc154e66d 101 Gene3D G3DSA:4.10.830.10 41 101 5.8E-22 T 14-10-2018 C3Y93_07725 f00afc62f4427691c0cb0d1dc154e66d 101 SUPERFAMILY SSF57716 2 101 2.57E-38 T 14-10-2018 C3Y93_07725 f00afc62f4427691c0cb0d1dc154e66d 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.606 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid C3Y93_07725 f00afc62f4427691c0cb0d1dc154e66d 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 2.4E-25 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C3Y93_08325 f606cba82ff9d478d161e49419acda36 109 Pfam PF04999 Cell division protein FtsL 16 101 1.4E-26 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 C3Y93_08325 f606cba82ff9d478d161e49419acda36 109 Hamap MF_00910 Cell division protein FtsL [ftsL]. 17 100 13.599 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 C3Y93_08325 f606cba82ff9d478d161e49419acda36 109 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 100 6.1E-13 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 C3Y93_07810 aedabf5d3826a9e830f13fba87ea80d5 527 Pfam PF05872 Bacterial protein of unknown function (DUF853) 11 526 4.8E-232 T 14-10-2018 IPR033186 Helicase HerA-like C-terminal C3Y93_07810 aedabf5d3826a9e830f13fba87ea80d5 527 SUPERFAMILY SSF52540 17 386 7.61E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_07810 aedabf5d3826a9e830f13fba87ea80d5 527 Gene3D G3DSA:3.40.50.300 4 85 6.8E-10 T 14-10-2018 C3Y93_07810 aedabf5d3826a9e830f13fba87ea80d5 527 Gene3D G3DSA:3.40.50.300 202 379 8.7E-22 T 14-10-2018 C3Y93_02015 0b32e2359a67e7336b644058fd79a83b 288 Pfam PF13612 Transposase DDE domain 111 259 1.0E-46 T 14-10-2018 IPR025668 Transposase DDE domain C3Y93_02080 0b32e2359a67e7336b644058fd79a83b 288 Pfam PF13612 Transposase DDE domain 111 259 1.0E-46 T 14-10-2018 IPR025668 Transposase DDE domain C3Y93_12720 dbbee96eb06afdcdaa6e81c0582b78f3 121 Pfam PF04343 Protein of unknown function, DUF488 6 112 9.6E-32 T 14-10-2018 IPR007438 Protein of unknown function DUF488 C3Y93_08720 c04e9ac949d325e7f4972505006c5a9d 118 Pfam PF02656 Domain of unknown function (DUF202) 19 85 1.5E-11 T 14-10-2018 IPR003807 Domain of unknown function DUF202 C3Y93_11975 a660ea7e13ff4328c8c84b401575a55d 80 Pfam PF04102 SlyX 15 80 8.4E-18 T 14-10-2018 IPR007236 SlyX C3Y93_07625 640ebc66d1f460396bd8aa3a0b0a0b0d 735 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 309 723 4.2E-16 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit C3Y93_12155 f311d7bd884e7d1845d2e872d0e09eba 82 Gene3D G3DSA:1.10.10.1130 1 79 3.7E-26 T 14-10-2018 C3Y93_12155 f311d7bd884e7d1845d2e872d0e09eba 82 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 5.1E-26 T 14-10-2018 IPR021250 Protein of unknown function DUF2789 C3Y93_00155 93732e77dd03aee4f4d082e43b95d1e0 398 Gene3D G3DSA:2.40.160.60 29 398 2.9E-18 T 14-10-2018 C3Y93_00155 93732e77dd03aee4f4d082e43b95d1e0 398 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 181 398 3.2E-8 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) C3Y93_00155 93732e77dd03aee4f4d082e43b95d1e0 398 SUPERFAMILY SSF56935 22 398 3.16E-34 T 14-10-2018 C3Y93_09960 fa3dbf3fdb1123ed6f1ddbf928f7377a 494 Pfam PF00209 Sodium:neurotransmitter symporter family 5 120 1.7E-39 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C3Y93_09960 fa3dbf3fdb1123ed6f1ddbf928f7377a 494 Pfam PF00209 Sodium:neurotransmitter symporter family 125 460 1.1E-62 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C3Y93_09960 fa3dbf3fdb1123ed6f1ddbf928f7377a 494 SUPERFAMILY SSF161070 5 476 8.37E-133 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 C3Y93_09960 fa3dbf3fdb1123ed6f1ddbf928f7377a 494 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 1.7E-24 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C3Y93_09960 fa3dbf3fdb1123ed6f1ddbf928f7377a 494 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 1.7E-24 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C3Y93_09960 fa3dbf3fdb1123ed6f1ddbf928f7377a 494 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 85 111 1.7E-24 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C3Y93_09960 fa3dbf3fdb1123ed6f1ddbf928f7377a 494 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 310 329 1.7E-24 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C3Y93_09960 fa3dbf3fdb1123ed6f1ddbf928f7377a 494 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 29 43 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C3Y93_00535 aaf9b0b79d5805d1915a80eb40718400 302 Pfam PF01882 Protein of unknown function DUF58 200 274 1.7E-10 T 14-10-2018 IPR002881 Domain of unknown function DUF58 C3Y93_03370 fde65ad5e14e497bd76cef66a4a141d8 302 Gene3D G3DSA:1.20.1530.20 158 302 2.9E-8 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily C3Y93_03370 fde65ad5e14e497bd76cef66a4a141d8 302 Pfam PF01758 Sodium Bile acid symporter family 193 302 2.7E-7 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 C3Y93_01025 0bc08fd6ff00e61a309c8ceb1a7d146d 192 Pfam PF01553 Acyltransferase 23 139 7.7E-14 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3Y93_01025 0bc08fd6ff00e61a309c8ceb1a7d146d 192 SUPERFAMILY SSF69593 19 146 2.09E-16 T 14-10-2018 C3Y93_01025 0bc08fd6ff00e61a309c8ceb1a7d146d 192 SMART SM00563 30 143 2.8E-17 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C3Y93_07330 dc73f18a65a94e33f1fb2e497f3e1760 271 Gene3D G3DSA:3.30.565.40 41 154 1.7E-7 T 14-10-2018 C3Y93_07080 2ecf60befc65174f7578b9fb64417e44 268 Pfam PF01522 Polysaccharide deacetylase 84 226 1.2E-29 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 C3Y93_07080 2ecf60befc65174f7578b9fb64417e44 268 SUPERFAMILY SSF88713 49 247 6.43E-42 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 C3Y93_07080 2ecf60befc65174f7578b9fb64417e44 268 Gene3D G3DSA:3.20.20.370 27 264 1.5E-63 T 14-10-2018 C3Y93_09820 cffcb83b9843a078d234fcb569bc7e7e 85 Pfam PF04226 Transglycosylase associated protein 34 80 4.9E-12 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 C3Y93_11510 61b59787ec79c42f498cc80e0dd4f30e 87 Pfam PF04325 Protein of unknown function (DUF465) 31 78 8.1E-12 T 14-10-2018 IPR007420 Protein of unknown function DUF465 C3Y93_11510 61b59787ec79c42f498cc80e0dd4f30e 87 Gene3D G3DSA:1.20.58.660 13 87 4.7E-25 T 14-10-2018 C3Y93_09050 5931f1d5480326a98eb2e638d600c01f 109 Gene3D G3DSA:1.20.1270.360 2 109 4.5E-33 T 14-10-2018 C3Y93_09050 5931f1d5480326a98eb2e638d600c01f 109 Pfam PF03860 Domain of Unknown Function (DUF326) 87 106 2.3E-6 T 14-10-2018 IPR005560 Protein of unknown function DUF326 C3Y93_06125 6f4e848eebab713de7e59c8e18d2c660 284 Gene3D G3DSA:3.60.130.10 2 275 7.8E-45 T 14-10-2018 C3Y93_06125 6f4e848eebab713de7e59c8e18d2c660 284 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 13 272 4.5E-28 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 C3Y93_06125 6f4e848eebab713de7e59c8e18d2c660 284 SUPERFAMILY SSF51197 12 275 2.06E-38 T 14-10-2018 C3Y93_09130 de35831e2c3092561f8b1784731fcdaf 359 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 329 2.8E-76 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 C3Y93_09130 de35831e2c3092561f8b1784731fcdaf 359 SUPERFAMILY SSF51395 2 351 2.29E-112 T 14-10-2018 C3Y93_09130 de35831e2c3092561f8b1784731fcdaf 359 Gene3D G3DSA:3.20.20.70 1 359 6.0E-127 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C3Y93_10300 d95583315dc5ca542ad0934510abc7c7 460 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 292 366 7.6E-9 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C3Y93_04440 015bb8752ee31bae17b9cce25d31b3d1 400 Pfam PF13194 Domain of unknown function (DUF4010) 167 373 4.6E-31 T 14-10-2018 IPR025105 Domain of unknown function DUF4010 C3Y93_04440 015bb8752ee31bae17b9cce25d31b3d1 400 Pfam PF02308 MgtC family 3 118 5.1E-15 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 C3Y93_12645 b8bdc87b06782bff5f691f09b2ce8a3d 92 SUPERFAMILY SSF54534 4 88 1.24E-25 T 14-10-2018 C3Y93_12645 b8bdc87b06782bff5f691f09b2ce8a3d 92 Pfam PF00639 PPIC-type PPIASE domain 14 88 6.5E-19 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 C3Y93_12645 b8bdc87b06782bff5f691f09b2ce8a3d 92 Gene3D G3DSA:3.10.50.40 1 91 1.6E-29 T 14-10-2018 C3Y93_06225 e41575cf82bf60474dd079b50f3f4c42 266 SUPERFAMILY SSF55729 31 236 2.81E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C3Y93_06225 e41575cf82bf60474dd079b50f3f4c42 266 Pfam PF13444 Acetyltransferase (GNAT) domain 50 145 3.8E-17 T 14-10-2018 C3Y93_06225 e41575cf82bf60474dd079b50f3f4c42 266 Gene3D G3DSA:3.40.630.30 37 197 2.9E-16 T 14-10-2018 C3Y93_13005 27e757ca0dc455726e26cf0ae7730946 205 SUPERFAMILY SSF48317 10 198 1.02E-38 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily C3Y93_13005 27e757ca0dc455726e26cf0ae7730946 205 Pfam PF01569 PAP2 superfamily 84 190 1.8E-19 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase C3Y93_13005 27e757ca0dc455726e26cf0ae7730946 205 SMART SM00014 80 189 6.8E-20 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase C3Y93_13005 27e757ca0dc455726e26cf0ae7730946 205 Gene3D G3DSA:1.20.144.10 1 111 1.1E-8 T 14-10-2018 C3Y93_13005 27e757ca0dc455726e26cf0ae7730946 205 Gene3D G3DSA:1.20.144.10 112 203 1.1E-21 T 14-10-2018 C3Y93_03615 104e15eaf427e2ff3ae707be33db8ae0 220 PIRSF PIRSF006324 2 220 3.2E-45 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 C3Y93_03615 104e15eaf427e2ff3ae707be33db8ae0 220 Pfam PF01810 LysE type translocator 17 217 2.3E-36 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 C3Y93_02600 53d79aea8a1c2780f5ea5405f80082eb 94 Pfam PF04077 DsrH like protein 20 89 3.4E-8 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 C3Y93_02600 53d79aea8a1c2780f5ea5405f80082eb 94 SUPERFAMILY SSF75169 6 91 1.22E-8 T 14-10-2018 IPR027396 DsrEFH-like C3Y93_02600 53d79aea8a1c2780f5ea5405f80082eb 94 Gene3D G3DSA:3.40.1260.10 5 93 5.9E-9 T 14-10-2018 IPR027396 DsrEFH-like C3Y93_08690 af04cadf2bb2693ea99a294e9c714c72 419 Pfam PF03573 outer membrane porin, OprD family 37 418 5.0E-67 T 14-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 C3Y93_08690 af04cadf2bb2693ea99a294e9c714c72 419 Gene3D G3DSA:2.40.160.10 30 419 5.9E-121 T 14-10-2018 IPR023614 Porin domain superfamily C3Y93_07280 ce1e333d822b867ba4bca659dad97205 107 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 5 99 4.3E-35 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 C3Y93_03345 f89c7475eaa0ed7913de416e01082b1a 295 Pfam PF01925 Sulfite exporter TauE/SafE 7 268 1.1E-47 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 C3Y93_12515 28f498a02d430104c704254e90b49a61 224 Pfam PF04172 LrgB-like family 11 218 4.8E-49 T 14-10-2018 IPR007300 CidB/LrgB family C3Y93_05590 cbc4eec85d16f09e656416cd9abdb049 445 SUPERFAMILY SSF56935 85 445 3.66E-25 T 14-10-2018 C3Y93_05590 cbc4eec85d16f09e656416cd9abdb049 445 Gene3D G3DSA:2.40.160.10 84 445 5.6E-8 T 14-10-2018 IPR023614 Porin domain superfamily C3Y93_12940 7551456c050308eefb3528ac37bee26f 427 SUPERFAMILY SSF103473 6 419 2.88E-28 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_12940 7551456c050308eefb3528ac37bee26f 427 Pfam PF13000 Acetyl-coenzyme A transporter 1 8 157 7.0E-22 T 14-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 C3Y93_12940 7551456c050308eefb3528ac37bee26f 427 Gene3D G3DSA:1.20.1250.20 1 414 3.1E-21 T 14-10-2018 C3Y93_03280 727f382d6272df251cb15c346f0d06c2 99 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 21 96 5.0E-21 T 14-10-2018 IPR011846 Cyd operon protein YbgE C3Y93_11880 af99ae84d6acdc8bf03f99e19a654f5e 81 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 3.6E-28 T 14-10-2018 IPR021250 Protein of unknown function DUF2789 C3Y93_11880 af99ae84d6acdc8bf03f99e19a654f5e 81 Gene3D G3DSA:1.10.10.1130 1 79 6.1E-28 T 14-10-2018 C3Y93_04155 14a9806f4ac4afa439b83400ba7d3764 180 Gene3D G3DSA:2.60.450.10 57 180 2.0E-8 T 14-10-2018 C3Y93_04155 14a9806f4ac4afa439b83400ba7d3764 180 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 179 5.8E-31 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related C3Y93_04155 14a9806f4ac4afa439b83400ba7d3764 180 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 178 1.3E-32 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 C3Y93_05230 6f64636d8cc4e4a24b311b818fdf86e3 225 Pfam PF04972 BON domain 61 113 3.6E-11 T 14-10-2018 IPR007055 BON domain C3Y93_05230 6f64636d8cc4e4a24b311b818fdf86e3 225 Pfam PF04972 BON domain 124 185 0.0068 T 14-10-2018 IPR007055 BON domain C3Y93_04125 1208ed7127ff458958fec2ccace8bbf4 221 Pfam PF01596 O-methyltransferase 20 193 3.2E-42 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 C3Y93_04125 1208ed7127ff458958fec2ccace8bbf4 221 Gene3D G3DSA:3.40.50.150 1 221 3.2E-65 T 14-10-2018 C3Y93_04125 1208ed7127ff458958fec2ccace8bbf4 221 SUPERFAMILY SSF53335 4 220 1.79E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C3Y93_07155 8ac3f5e64155cb638b6d0716ce25b786 478 SUPERFAMILY SSF56954 13 472 2.35E-84 T 14-10-2018 C3Y93_07155 8ac3f5e64155cb638b6d0716ce25b786 478 Pfam PF02321 Outer membrane efflux protein 285 470 2.5E-25 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3Y93_07155 8ac3f5e64155cb638b6d0716ce25b786 478 Pfam PF02321 Outer membrane efflux protein 72 257 4.3E-19 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C3Y93_07155 8ac3f5e64155cb638b6d0716ce25b786 478 Gene3D G3DSA:1.20.1600.10 63 471 2.5E-102 T 14-10-2018 C3Y93_07155 8ac3f5e64155cb638b6d0716ce25b786 478 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 22 471 5.5E-82 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 C3Y93_07155 8ac3f5e64155cb638b6d0716ce25b786 478 Gene3D G3DSA:2.20.200.10 109 361 2.5E-102 T 14-10-2018 C3Y93_00525 e40515975b42c987ca375a7c0c00d878 100 Pfam PF04328 Selenoprotein, putative 36 100 2.5E-22 T 14-10-2018 IPR007423 Selenoprotein, putative C3Y93_10420 709cfd052fa13727df2c6f0ea520c102 110 Pfam PF04341 Protein of unknown function, DUF485 11 95 2.8E-30 T 14-10-2018 IPR007436 Protein of unknown function DUF485 C3Y93_04570 9aec1fb947dd6aa6febc05eb24e88853 142 Pfam PF01527 Transposase 16 61 1.8E-9 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 C3Y93_04570 9aec1fb947dd6aa6febc05eb24e88853 142 SUPERFAMILY SSF46689 16 68 3.14E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_12800 00831b1505096d13972ba34af4efaed8 243 Gene3D G3DSA:3.40.50.1820 2 234 8.5E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_12800 00831b1505096d13972ba34af4efaed8 243 SUPERFAMILY SSF53474 5 238 1.57E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C3Y93_09325 1ba6a3ba52d61775393d0443a867afb9 260 Pfam PF01925 Sulfite exporter TauE/SafE 9 243 2.1E-19 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 C3Y93_10140 55a0e9d428101ee3a74ee031e2b26baa 480 Pfam PF14052 Capsule assembly protein Wzi 90 466 2.9E-107 T 14-10-2018 IPR026950 Capsule assembly protein Wzi C3Y93_10140 55a0e9d428101ee3a74ee031e2b26baa 480 Gene3D G3DSA:2.40.160.130 21 475 3.0E-161 T 14-10-2018 IPR038636 Capsule assembly protein Wzi superfamily C3Y93_02155 e2e486bb58090113f645d8029eaad320 357 Pfam PF13609 Gram-negative porin 7 334 4.9E-29 T 14-10-2018 C3Y93_02155 e2e486bb58090113f645d8029eaad320 357 SUPERFAMILY SSF56935 14 357 1.71E-45 T 14-10-2018 C3Y93_02155 e2e486bb58090113f645d8029eaad320 357 Gene3D G3DSA:2.40.160.10 7 357 8.9E-54 T 14-10-2018 IPR023614 Porin domain superfamily C3Y93_03690 2e5c8768cd071ff5620c2a70b9240b3f 439 SUPERFAMILY SSF103473 8 427 1.31E-35 T 14-10-2018 IPR036259 MFS transporter superfamily C3Y93_03690 2e5c8768cd071ff5620c2a70b9240b3f 439 Pfam PF07690 Major Facilitator Superfamily 17 379 8.1E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C3Y93_03690 2e5c8768cd071ff5620c2a70b9240b3f 439 Gene3D G3DSA:1.20.1250.20 7 424 2.4E-31 T 14-10-2018 C3Y93_11450 f357fcd318cb900f30757edc59de98e7 539 Pfam PF03109 ABC1 family 113 231 3.2E-34 T 14-10-2018 IPR004147 UbiB domain C3Y93_11450 f357fcd318cb900f30757edc59de98e7 539 SUPERFAMILY SSF56112 95 435 7.26E-23 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3Y93_02875 d0a29d861beedaa6cfbfddb9dcdad59c 252 PIRSF PIRSF028589 1 248 5.3E-40 T 14-10-2018 IPR016893 Protein of unknown function UCP028589 C3Y93_13785 115db0e9357290322c75e2705398c64c 605 Pfam PF13387 Domain of unknown function (DUF4105) 99 268 2.4E-53 T 14-10-2018 IPR025178 Domain of unknown function DUF4105 C3Y93_11610 cbc52bb5f933312fd69b136e0be7edff 342 Pfam PF13271 Domain of unknown function (DUF4062) 7 85 1.8E-12 T 14-10-2018 IPR025139 Domain of unknown function DUF4062 C3Y93_11305 a2a79c4228a152688002c0f9585b2269 328 Pfam PF03783 Curli production assembly/transport component CsgG 124 266 9.1E-11 T 14-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 C3Y93_02850 85422ef67a5e3f9506721db242c67bb5 956 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 121 195 2.5E-23 T 14-10-2018 IPR013491 Caudovirus, tape measure, N-terminal C3Y93_01305 71930a96c53db91f02ffbbe0d4686160 264 Pfam PF07103 Protein of unknown function (DUF1365) 9 256 4.8E-48 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 C3Y93_05865 9c60bcc652588c109fa6ef8ac7bf945e 497 Pfam PF00361 Proton-conducting membrane transporter 127 423 2.7E-72 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05865 9c60bcc652588c109fa6ef8ac7bf945e 497 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 11 478 4.0E-126 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 C3Y93_05865 9c60bcc652588c109fa6ef8ac7bf945e 497 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 8 478 17.485 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 C3Y93_05865 9c60bcc652588c109fa6ef8ac7bf945e 497 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 7.4E-5 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05865 9c60bcc652588c109fa6ef8ac7bf945e 497 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 7.4E-5 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_05865 9c60bcc652588c109fa6ef8ac7bf945e 497 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 380 406 7.4E-5 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C3Y93_10805 387f2aa0447ab99125210b1abb137815 75 Pfam PF04380 Membrane fusogenic activity 4 69 2.3E-13 T 14-10-2018 IPR007475 Membrane fusogenic activity C3Y93_09090 77b2998495d044970504ebdf762d4662 234 Gene3D G3DSA:3.30.420.10 67 210 3.0E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C3Y93_09090 77b2998495d044970504ebdf762d4662 234 SUPERFAMILY SSF53098 72 191 1.21E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C3Y93_09090 77b2998495d044970504ebdf762d4662 234 Pfam PF13610 DDE domain 74 212 9.8E-50 T 14-10-2018 IPR032874 DDE domain C3Y93_09735 1ddb39f13b32381fec7604ed3d45c565 338 Gene3D G3DSA:3.40.190.170 58 248 1.1E-9 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily C3Y93_00990 892d3efca38666175d2ed35bbf7fc10a 250 Pfam PF03591 AzlC protein 24 164 1.6E-33 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease C3Y93_09170 20fff2a892195a6ec3b3a4aa6705135f 121 Pfam PF03692 Putative zinc- or iron-chelating domain 10 90 2.4E-6 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein C3Y93_13110 4e626254857356b31e47014eccd29bf0 204 Pfam PF09335 SNARE associated Golgi protein 32 162 3.0E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein C3Y93_11270 f9337b618355e0497b149cbceb2a0acf 205 Gene3D G3DSA:2.60.120.590 23 203 2.0E-57 T 14-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily C3Y93_11270 f9337b618355e0497b149cbceb2a0acf 205 SUPERFAMILY SSF51197 27 200 6.11E-55 T 14-10-2018 C3Y93_11270 f9337b618355e0497b149cbceb2a0acf 205 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 27 198 7.7E-28 T 14-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like C3Y93_09835 74a1695e5fb93856bc9b4e0908e77d14 321 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 314 3.5E-115 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 C3Y93_09835 74a1695e5fb93856bc9b4e0908e77d14 321 Pfam PF03741 Integral membrane protein TerC family 80 283 2.3E-51 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 C3Y93_13735 ae44ce861317e8bdc844fe8ee84fbe41 120 Gene3D G3DSA:3.10.20.560 18 120 5.6E-35 T 14-10-2018 C3Y93_13735 ae44ce861317e8bdc844fe8ee84fbe41 120 Pfam PF04663 Phenol hydroxylase conserved region 15 78 1.1E-18 T 14-10-2018 IPR006756 Phenol hydroxylase KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 C3Y93_01765 49114c7cb7ec0580d67dad9d556eea3a 121 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 87 1.7E-15 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 C3Y93_01480 f5901764da65e9d4a294a3e68666ca3e 127 Pfam PF06803 Protein of unknown function (DUF1232) 34 70 4.1E-14 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 C3Y93_05300 29882c812080b712258979c09a989aa2 96 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 19 90 5.6E-28 T 14-10-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 C3Y93_12765 9d8d3e0b4fb04065a8e1ec1da58d894b 269 Pfam PF01925 Sulfite exporter TauE/SafE 7 259 6.5E-51 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 C3Y93_11400 9dc4a9d1cdc4c11b0ca7ca283d46cbb1 132 Pfam PF03334 Na+/H+ antiporter subunit 12 91 4.5E-25 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 C3Y93_11400 9dc4a9d1cdc4c11b0ca7ca283d46cbb1 132 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 98 9.9E-25 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 C3Y93_04520 fb37534d7ae556e488a1257c061a6625 263 ProDom PD121987 PLASMID RESISTANT TELLURIUM KLAA KLAA/KILA MAINTENANCE RESISTANCE KILA TELLURITE 64 258 2.0E-61 T 14-10-2018 C3Y93_05025 61d559b12d3db735e6a84ca06e1c422f 321 Pfam PF14415 Domain of unknown function (DUF4424) 24 313 8.7E-76 T 14-10-2018 IPR025538 Domain of unknown function DUF4424 C3Y93_09305 1270bbef81a14390d385d38ba5dfb177 256 Pfam PF13557 Putative MetA-pathway of phenol degradation 27 255 8.8E-14 T 14-10-2018 IPR025737 MetA-pathway of phenol degradation, putative C3Y93_03010 cbda6f16e39a7c3c308edf6a445f5b6e 262 Pfam PF10543 ORF6N domain 16 101 5.2E-15 T 14-10-2018 IPR018873 KilA-N, DNA-binding domain C3Y93_13950 27441984bdea32bd66a98a91b731a8bf 376 Pfam PF12698 ABC-2 family transporter protein 17 364 1.1E-27 T 14-10-2018 C3Y93_13950 27441984bdea32bd66a98a91b731a8bf 376 Gene3D G3DSA:3.40.1710.10 39 160 7.0E-6 T 14-10-2018 C3Y93_03520 af9e23375f502a371fc983f2b348cd23 127 Gene3D G3DSA:3.30.56.110 8 127 8.3E-50 T 14-10-2018 C3Y93_03520 af9e23375f502a371fc983f2b348cd23 127 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 13 126 6.6E-50 T 14-10-2018 IPR018714 Protein of unknown function DUF2237 C3Y93_12550 f683a78bfaa01bfdcc5d2acbe0d923c2 215 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 214 1.2E-54 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 C3Y93_12550 f683a78bfaa01bfdcc5d2acbe0d923c2 215 Pfam PF03006 Haemolysin-III related 12 207 4.6E-33 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 C3Y93_12685 810d32afbb72a26b8f0e6164d0feafee 47 Pfam PF07295 Zinc-ribbon containing domain 3 43 7.9E-8 T 14-10-2018 IPR009912 Zinc-ribbon containing domain C3Y93_06385 0e723f470a168bb715f5f2ff4219da5a 302 Pfam PF05275 Copper resistance protein B precursor (CopB) 98 302 5.3E-50 T 14-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 C3Y93_04690 6f9f951968d7cfcf2d8c97610aeb3c7b 127 Pfam PF01527 Transposase 14 68 4.4E-8 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 C3Y93_04690 6f9f951968d7cfcf2d8c97610aeb3c7b 127 SUPERFAMILY SSF46689 15 67 2.15E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C3Y93_04010 2ca16e16795341abcd704a49c21497a7 477 Pfam PF03235 Protein of unknown function DUF262 14 194 5.0E-27 T 14-10-2018 IPR004919 Domain of unknown function DUF262 C3Y93_08020 84af25805a12d5e5bea1f963054e3c47 214 Gene3D G3DSA:3.40.50.300 1 207 4.1E-41 T 14-10-2018 C3Y93_08020 84af25805a12d5e5bea1f963054e3c47 214 PIRSF PIRSF009320 1 200 2.8E-31 T 14-10-2018 C3Y93_08020 84af25805a12d5e5bea1f963054e3c47 214 SUPERFAMILY SSF52540 1 204 6.73E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C3Y93_08020 84af25805a12d5e5bea1f963054e3c47 214 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 182 9.8E-18 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain C3Y93_01315 8caad2068696c04cc38a84d6c709ba13 258 Pfam PF06966 Protein of unknown function (DUF1295) 17 249 6.1E-54 T 14-10-2018 IPR010721 Protein of unknown function DUF1295 C3Y93_01315 8caad2068696c04cc38a84d6c709ba13 258 Gene3D G3DSA:1.20.120.1630 54 255 6.3E-19 T 14-10-2018 C3Y93_06135 f83ac67afb1010debbc3ac2e68e5cc4f 185 Pfam PF12261 Thermostable hemolysin 4 173 7.9E-51 T 14-10-2018 IPR022050 Thermostable hemolysin C3Y93_13750 1cd117adda9f178a2402aca1340de3d2 290 Pfam PF13557 Putative MetA-pathway of phenol degradation 62 284 3.9E-57 T 14-10-2018 IPR025737 MetA-pathway of phenol degradation, putative C3Y93_08170 83f8ac6245e7b8af9c9a5d64a5892360 64 Gene3D G3DSA:1.10.10.1100 1 57 6.7E-22 T 14-10-2018 C3Y93_08170 83f8ac6245e7b8af9c9a5d64a5892360 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 1.3E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain C3Y93_00015 16a9180a7cc6025e8fa5d6f8845a6033 605 TIGRFAM TIGR04214 CSLREA_Nterm: CSLREA domain 22 47 1.7E-10 T 14-10-2018 IPR026457 CSLREA domain C3Y93_00015 16a9180a7cc6025e8fa5d6f8845a6033 605 TIGRFAM TIGR04212 GlyGly_RbtA: rhombotarget A 1 602 5.0E-231 T 14-10-2018 IPR026454 Rhombotarget A C3Y93_00015 16a9180a7cc6025e8fa5d6f8845a6033 605 SUPERFAMILY SSF51126 10 450 5.97E-13 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor C3Y93_02140 fe33ff9e5318ebce2c6932e8f1ade714 290 Pfam PF10977 Protein of unknown function (DUF2797) 47 285 8.5E-93 T 14-10-2018 IPR021246 Protein of unknown function DUF2797 C3Y93_00520 bf4e90d7e8532443c2f18e7e6df70805 699 Pfam PF02554 Carbon starvation protein CstA 38 414 8.9E-172 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 C3Y93_00520 bf4e90d7e8532443c2f18e7e6df70805 699 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 597 6.5E-33 T 14-10-2018 IPR025299 CstA, C-terminal domain C3Y93_10400 df21fddf3e01fcb68b00e6349a15db96 93 Pfam PF11391 Protein of unknown function (DUF2798) 25 82 4.5E-19 T 14-10-2018 IPR021529 Protein of unknown function DUF2798 C3Y93_04875 6072e8d06cff70be0337ecf1c425ac44 490 Pfam PF03837 RecT family 106 231 1.9E-4 T 14-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 C3Y93_00625 abc1db87108be9b0cdbdfe584569a3e5 260 Pfam PF01435 Peptidase family M48 63 246 1.2E-35 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 C3Y93_02885 6a65ad32f59313c3b8c4812a37af965e 164 Pfam PF05069 Phage virion morphogenesis family 10 154 3.1E-19 T 14-10-2018 IPR006522 Phage virion morphogensis protein C3Y93_03330 ff30907f445155306a569f17e50db841 401 Pfam PF00487 Fatty acid desaturase 133 341 7.8E-27 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 C3Y93_10555 9b09c4079593206cd978498eb79e2734 132 Pfam PF03899 ATP synthase I chain 16 112 3.6E-21 T 14-10-2018 IPR005598 ATP synthase protein I C3Y93_11240 076b376bdf8988830f2a7c280c05bbcb 138 Pfam PF06713 Bacterial PH domain 60 132 2.6E-17 T 14-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 C3Y93_06365 1474fd093f23d3d49701cf74f327cd08 212 Pfam PF08378 Nuclease-related domain 30 143 2.3E-29 T 14-10-2018 IPR011528 Nuclease-related domain, NERD C3Y93_09385 d4741758ba0a8bf07db7233d581ee098 59 Pfam PF14436 Bacterial EndoU nuclease 1 54 2.0E-10 T 14-10-2018 IPR029501 Bacterial EndoU nuclease C3Y93_02870 bbe68f07b8be5428af9c79cf29aa49dd 176 Pfam PF08346 AntA/AntB antirepressor 26 95 1.8E-25 T 14-10-2018 IPR013557 AntA/AntB antirepressor C3Y93_01745 85616a482850a7c559bff89fec8d84e3 143 Gene3D G3DSA:3.30.530.20 1 143 1.1E-16 T 14-10-2018 IPR023393 START-like domain superfamily C3Y93_01745 85616a482850a7c559bff89fec8d84e3 143 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 142 1.8E-12 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase C3Y93_01745 85616a482850a7c559bff89fec8d84e3 143 SUPERFAMILY SSF55961 1 141 3.93E-18 T 14-10-2018 C3Y93_01485 18b4d23dc3cca3e09666e512cb27d73b 190 Pfam PF04186 FxsA cytoplasmic membrane protein 6 113 9.5E-20 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 C3Y93_03710 e4f9f253fdd05b200175c135bb33fe16 432 Pfam PF03109 ABC1 family 99 217 4.6E-32 T 14-10-2018 IPR004147 UbiB domain C3Y93_03710 e4f9f253fdd05b200175c135bb33fe16 432 SUPERFAMILY SSF56112 79 360 4.6E-24 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C3Y93_04730 223ee17173997977c4c8283cd85ae8ca 550 Gene3D G3DSA:3.40.50.300 9 141 1.1E-5 T 14-10-2018 C3Y93_07420 19a5fdc4896d810e578e877f42dd14fb 156 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 69 116 7.0E-18 T 14-10-2018 IPR027805 Transposase, Helix-turn-helix domain C3Y93_13070 98c850c8d7824a6c31d4fa7bbb64054e 177 Gene3D G3DSA:3.30.1050.10 19 134 1.4E-5 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily C3Y93_08660 5ec6a86aafe78ec1361055398ab54172 726 SUPERFAMILY SSF56349 523 690 1.22E-5 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C3Y93_04950 63ebcf63de365d2ccdec89a6a6c938df 173 Pfam PF11948 Protein of unknown function (DUF3465) 59 173 5.7E-54 T 14-10-2018 IPR021856 Protein of unknown function DUF3465 C3Y93_01640 46da729394e3b74fa41dd32637e15083 229 SUPERFAMILY SSF53448 1 224 8.56E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_01640 46da729394e3b74fa41dd32637e15083 229 Gene3D G3DSA:3.90.550.10 1 227 5.8E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C3Y93_01640 46da729394e3b74fa41dd32637e15083 229 Pfam PF00483 Nucleotidyl transferase 2 222 2.9E-21 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 C3Y93_00845 71940226f4f5eba5c6b37d300b2819ef 193 Pfam PF02674 Colicin V production protein 4 141 4.8E-28 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 C3Y93_01490 8fb3699626d43bbad82b2a2a7e3e9ac2 213 Pfam PF01810 LysE type translocator 14 205 9.5E-28 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 C3Y93_01660 b11a7212b00a5d20541ab31e41e72703 215 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 185 2.7E-32 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel C3Y93_07575 b66e884c2b372f591fc12ff5f3808a70 165 Pfam PF14317 YcxB-like protein 108 164 8.4E-6 T 14-10-2018 IPR025588 YcxB-like protein C3Y93_03150 2fbdbb3a7d66145a101e80914ba4d14c 71 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 5 62 2.5E-17 T 14-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system C3Y93_08025 6e7b9eeef154d9891a1374e1aaa93b4d 378 Pfam PF01594 AI-2E family transporter 15 346 2.9E-43 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like C3Y93_01335 ca6b54c039b245300d98695c8177dd60 165 Pfam PF16036 Chalcone isomerase-like 58 164 2.4E-10 T 14-10-2018 IPR016087 Chalcone isomerase GO:0016872 C3Y93_12500 604932e33a9a59b78d1198605a73eedc 150 Gene3D G3DSA:2.40.128.520 22 150 5.7E-16 T 14-10-2018 C3Y93_12500 604932e33a9a59b78d1198605a73eedc 150 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 27 148 1.5E-25 T 14-10-2018 IPR019223 Domain of unknown function DUF2147 C3Y93_06925 88e25c2b47c2ececfb5aa1388962d55e 481 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 3 448 9.2E-117 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 C3Y93_04240 ff4282c3e0f0c24b428373879c893e19 364 Pfam PF00487 Fatty acid desaturase 75 340 5.3E-28 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 C3Y93_02685 8c9fa9478fa484ea8b9a4a07e9e56d18 406 Pfam PF03594 Benzoate membrane transport protein 11 386 1.2E-155 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 C3Y93_02685 8c9fa9478fa484ea8b9a4a07e9e56d18 406 TIGRFAM TIGR00843 benE: benzoate transporter 1 388 1.4E-180 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 C3Y93_00005 5a8514ea420943c6ec30d343c6a3e870 377 Pfam PF01594 AI-2E family transporter 10 343 2.3E-57 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like C3Y93_12735 31eaf07925ed2ce2039b6bbdd7ceebee 355 Pfam PF06674 Protein of unknown function (DUF1176) 45 351 7.2E-91 T 14-10-2018 IPR009560 Protein of unknown function DUF1176 C3Y93_12850 a3aca17ada4504c7b4a80203a0da7120 185 Pfam PF02620 Uncharacterized ACR, COG1399 64 181 1.9E-16 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD C3Y93_04390 845c89c0473c7c26fd705142330aac31 89 Pfam PF07023 Protein of unknown function (DUF1315) 4 82 8.1E-33 T 14-10-2018 IPR009749 Protein of unknown function DUF1315 C3Y93_14230 122760cf1f8c69d94300708d996ee24c 104 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 41 96 3.4E-21 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system C3Y93_02320 5e03e9ff207ac7fde895cfe6a25a2118 138 Pfam PF04143 Sulphur transport 40 125 7.5E-8 T 14-10-2018 IPR007272 Sulphur transport domain C3Y93_04660 f242fa82c07a6e8405b185857b768122 76 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 13 68 5.6E-17 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA C3Y93_13370 2b8064793dc8cb24972986df64d73a94 179 Gene3D G3DSA:2.60.40.1190 27 177 2.4E-5 T 14-10-2018 C3Y93_07025 222ec417b2671f49958c8fa1e94332c7 310 Pfam PF13737 Transposase DDE domain 23 130 1.4E-42 T 14-10-2018 IPR025668 Transposase DDE domain C3Y93_13595 27633eb411e7e219301c1f3a2e339dad 829 Pfam PF02687 FtsX-like permease family 731 818 1.4E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 C3Y93_06995 85cd601a0ff4850e5a23a3364077d142 254 Pfam PF13803 Domain of unknown function (DUF4184) 1 211 3.3E-37 T 14-10-2018 IPR025238 Protein of unknown function DUF4184