locus-tag class description AMQ28_00010 IPR003317 Cytochrome ubiquinol oxidase subunit 2 AMQ28_00015 IPR002585 Cytochrome ubiquinol oxidase subunit 1 AMQ28_00040 IPR036265 HIT-like superfamily AMQ28_00040 IPR011146 HIT-like domain AMQ28_00040 IPR001310 Histidine triad (HIT) protein AMQ28_00040 IPR039384 HINT family AMQ28_00040 IPR019808 Histidine triad, conserved site AMQ28_00055 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AMQ28_00055 IPR036291 NAD(P)-binding domain superfamily AMQ28_00055 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AMQ28_00055 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMQ28_00055 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMQ28_00055 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AMQ28_00055 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMQ28_00065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_00065 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_00065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_00065 IPR006234 O-succinylhomoserine sulfhydrylase AMQ28_00065 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AMQ28_00070 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMQ28_00070 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMQ28_00075 IPR034137 RecR, TOPRIM domain AMQ28_00075 IPR000093 DNA recombination protein RecR AMQ28_00075 IPR023627 Recombination protein RecR AMQ28_00075 IPR023628 Recombination protein RecR, C4-type zinc finger AMQ28_00075 IPR015967 Recombination protein RecR, conserved site AMQ28_00075 IPR006171 TOPRIM domain AMQ28_00080 IPR010997 HRDC-like superfamily AMQ28_00080 IPR036397 Ribonuclease H superfamily AMQ28_00080 IPR012337 Ribonuclease H-like superfamily AMQ28_00080 IPR006292 Ribonuclease D AMQ28_00080 IPR002121 HRDC domain AMQ28_00080 IPR002562 3'-5' exonuclease domain AMQ28_00085 IPR027354 YcgL domain AMQ28_00085 IPR038068 YcgL-like superfamily AMQ28_00095 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_00095 IPR005936 Peptidase, FtsH AMQ28_00095 IPR003959 ATPase, AAA-type, core AMQ28_00095 IPR041569 AAA ATPase, AAA+ lid domain AMQ28_00095 IPR037219 Peptidase M41-like AMQ28_00095 IPR000642 Peptidase M41 AMQ28_00095 IPR003593 AAA+ ATPase domain AMQ28_00105 IPR005990 Inosine-5'-monophosphate dehydrogenase AMQ28_00105 IPR013785 Aldolase-type TIM barrel AMQ28_00105 IPR000644 CBS domain AMQ28_00105 IPR015875 IMP dehydrogenase / GMP reductase, conserved site AMQ28_00105 IPR001093 IMP dehydrogenase/GMP reductase AMQ28_00135 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AMQ28_00135 IPR011765 Peptidase M16, N-terminal AMQ28_00135 IPR001431 Peptidase M16, zinc-binding site AMQ28_00135 IPR007863 Peptidase M16, C-terminal AMQ28_00140 IPR003593 AAA+ ATPase domain AMQ28_00140 IPR036225 SRP/SRP receptor, N-terminal AMQ28_00140 IPR013822 Signal recognition particle SRP54, helical bundle AMQ28_00140 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AMQ28_00140 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_00140 IPR004390 Signal-recognition particle receptor FtsY AMQ28_00140 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AMQ28_00180 IPR036397 Ribonuclease H superfamily AMQ28_00180 IPR012337 Ribonuclease H-like superfamily AMQ28_00180 IPR001584 Integrase, catalytic core AMQ28_00180 IPR038965 Transposase InsF-like AMQ28_00180 IPR025948 HTH-like domain AMQ28_00185 IPR009057 Homeobox-like domain superfamily AMQ28_00185 IPR002514 Transposase IS3/IS911family AMQ28_00185 IPR010921 Trp repressor/replication initiator AMQ28_00190 IPR000189 Prokaryotic transglycosylase, active site AMQ28_00190 IPR016047 Peptidase M23 AMQ28_00190 IPR023346 Lysozyme-like domain superfamily AMQ28_00190 IPR011055 Duplicated hybrid motif AMQ28_00190 IPR010090 Phage tail tape measure protein AMQ28_00190 IPR008258 Transglycosylase SLT domain 1 AMQ28_00195 IPR002818 DJ-1/PfpI AMQ28_00195 IPR029062 Class I glutamine amidotransferase-like AMQ28_00195 IPR006286 Deglycase PfpI AMQ28_00205 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMQ28_00205 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMQ28_00205 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMQ28_00205 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMQ28_00205 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMQ28_00205 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMQ28_00205 IPR006089 Acyl-CoA dehydrogenase, conserved site AMQ28_00210 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMQ28_00210 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMQ28_00210 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMQ28_00210 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMQ28_00210 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMQ28_00210 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMQ28_00210 IPR006089 Acyl-CoA dehydrogenase, conserved site AMQ28_00215 IPR011009 Protein kinase-like domain superfamily AMQ28_00215 IPR004147 UbiB domain AMQ28_00230 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMQ28_00230 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase AMQ28_00230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_00230 IPR004556 Methyltransferase HemK-like AMQ28_00230 IPR007848 Methyltransferase small domain AMQ28_00235 IPR020541 Chorismate synthase, conserved site AMQ28_00235 IPR000453 Chorismate synthase AMQ28_00235 IPR035904 Chorismate synthase AroC superfamily AMQ28_00245 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site AMQ28_00245 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily AMQ28_00245 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase AMQ28_00255 IPR006218 DAHP synthetase I/KDSA AMQ28_00255 IPR013785 Aldolase-type TIM barrel AMQ28_00255 IPR006219 DHAP synthase, class 1 AMQ28_00260 IPR002781 Transmembrane protein TauE-like AMQ28_00275 IPR011662 Secretin/TonB, short N-terminal domain AMQ28_00275 IPR012910 TonB-dependent receptor, plug domain AMQ28_00275 IPR010105 TonB-dependent siderophore receptor AMQ28_00275 IPR010917 TonB-dependent receptor, conserved site AMQ28_00275 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMQ28_00275 IPR010916 TonB box, conserved site AMQ28_00275 IPR000531 TonB-dependent receptor-like, beta-barrel AMQ28_00275 IPR039423 TonB-dependent receptor-like AMQ28_00275 IPR037066 TonB-dependent receptor, plug domain superfamily AMQ28_00280 IPR003835 Glycosyl transferase, family 19 AMQ28_00285 IPR009057 Homeobox-like domain superfamily AMQ28_00285 IPR018060 DNA binding HTH domain, AraC-type AMQ28_00285 IPR018062 HTH domain AraC-type, conserved site AMQ28_00285 IPR014710 RmlC-like jelly roll fold AMQ28_00285 IPR011051 RmlC-like cupin domain superfamily AMQ28_00285 IPR032783 AraC-type transcription regulator, ligand-binding domain AMQ28_00285 IPR020449 Transcription regulator HTH, AraC- type AMQ28_00290 IPR033885 Alkane/xylene monooxygenase AMQ28_00290 IPR005804 Fatty acid desaturase domain AMQ28_00295 IPR036458 Sodium:dicarboxylate symporter superfamily AMQ28_00295 IPR023954 C4-dicarboxylate transport protein AMQ28_00295 IPR001991 Sodium:dicarboxylate symporter AMQ28_00295 IPR018107 Sodium:dicarboxylate symporter, conserved site AMQ28_00300 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AMQ28_00300 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily AMQ28_00300 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMQ28_00310 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase AMQ28_00310 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_00315 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic AMQ28_00315 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily AMQ28_00315 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like AMQ28_00315 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal AMQ28_00325 IPR003805 Adenosylcobinamide-GDP ribazoletransferase AMQ28_00345 IPR017463 Sulphur relay, TusD/DsrE AMQ28_00345 IPR027396 DsrEFH-like AMQ28_00345 IPR003787 Sulphur relay, DsrE/F-like protein AMQ28_00350 IPR025948 HTH-like domain AMQ28_00350 IPR012337 Ribonuclease H-like superfamily AMQ28_00350 IPR036397 Ribonuclease H superfamily AMQ28_00350 IPR001584 Integrase, catalytic core AMQ28_00365 IPR036291 NAD(P)-binding domain superfamily AMQ28_00365 IPR016040 NAD(P)-binding domain AMQ28_00365 IPR005886 UDP-glucose 4-epimerase AMQ28_00370 IPR020557 Fumarate lyase, conserved site AMQ28_00370 IPR005677 Fumarate hydratase, class II AMQ28_00370 IPR024083 Fumarase/histidase, N-terminal AMQ28_00370 IPR018951 Fumarase C, C-terminal AMQ28_00370 IPR008948 L-Aspartase-like AMQ28_00370 IPR022761 Fumarate lyase, N-terminal AMQ28_00370 IPR000362 Fumarate lyase family AMQ28_00390 IPR002585 Cytochrome ubiquinol oxidase subunit 1 AMQ28_00395 IPR003317 Cytochrome ubiquinol oxidase subunit 2 AMQ28_00400 IPR035437 SNase-like, OB-fold superfamily AMQ28_00400 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMQ28_00400 IPR002071 Thermonuclease active site AMQ28_00405 IPR000847 Transcription regulator HTH, LysR AMQ28_00405 IPR005119 LysR, substrate-binding AMQ28_00405 IPR037416 Nodulation protein D, PBP2 AMQ28_00405 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_00405 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_00410 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMQ28_00410 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMQ28_00410 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMQ28_00410 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMQ28_00410 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMQ28_00410 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMQ28_00410 IPR006089 Acyl-CoA dehydrogenase, conserved site AMQ28_00425 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMQ28_00425 IPR036291 NAD(P)-binding domain superfamily AMQ28_00425 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_00440 IPR025202 Phospholipase D-like domain AMQ28_00440 IPR030871 Cardiolipin synthase C AMQ28_00440 IPR001736 Phospholipase D/Transphosphatidylase AMQ28_00445 IPR014183 Alcohol dehydrogenase class III AMQ28_00445 IPR013149 Alcohol dehydrogenase, C-terminal AMQ28_00445 IPR036291 NAD(P)-binding domain superfamily AMQ28_00445 IPR020843 Polyketide synthase, enoylreductase domain AMQ28_00445 IPR013154 Alcohol dehydrogenase, N-terminal AMQ28_00445 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMQ28_00445 IPR011032 GroES-like superfamily AMQ28_00450 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AMQ28_00450 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_00450 IPR000796 Aspartate/other aminotransferase AMQ28_00450 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_00450 IPR004839 Aminotransferase, class I/classII AMQ28_00450 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_00455 IPR004840 Amino acid permease, conserved site AMQ28_00455 IPR004841 Amino acid permease/ SLC12A domain AMQ28_00460 IPR005956 4-hydroxyphenylpyruvate dioxygenase AMQ28_00460 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMQ28_00460 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal AMQ28_00460 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal AMQ28_00460 IPR037523 Vicinal oxygen chelate (VOC) domain AMQ28_00460 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMQ28_00465 IPR013785 Aldolase-type TIM barrel AMQ28_00465 IPR006218 DAHP synthetase I/KDSA AMQ28_00465 IPR006219 DHAP synthase, class 1 AMQ28_00470 IPR020846 Major facilitator superfamily domain AMQ28_00470 IPR036259 MFS transporter superfamily AMQ28_00470 IPR011701 Major facilitator superfamily AMQ28_00475 IPR002930 Glycine cleavage system H-protein AMQ28_00475 IPR033753 Glycine cleavage system H-protein/Simiate AMQ28_00475 IPR017453 Glycine cleavage system H-protein, subgroup AMQ28_00475 IPR011053 Single hybrid motif AMQ28_00475 IPR000089 Biotin/lipoyl attachment AMQ28_00480 IPR020449 Transcription regulator HTH, AraC- type AMQ28_00480 IPR018060 DNA binding HTH domain, AraC-type AMQ28_00480 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AMQ28_00480 IPR009057 Homeobox-like domain superfamily AMQ28_00490 IPR011527 ABC transporter type 1, transmembrane domain AMQ28_00490 IPR003593 AAA+ ATPase domain AMQ28_00490 IPR017871 ABC transporter, conserved site AMQ28_00490 IPR003439 ABC transporter-like AMQ28_00490 IPR039421 Type I protein exporter AMQ28_00490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_00490 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMQ28_00500 IPR025668 Transposase DDE domain AMQ28_00520 IPR012337 Ribonuclease H-like superfamily AMQ28_00520 IPR025246 Transposase IS30-like HTH domain AMQ28_00520 IPR001598 Transposase, IS30, conserved site AMQ28_00520 IPR001584 Integrase, catalytic core AMQ28_00520 IPR036397 Ribonuclease H superfamily AMQ28_00525 IPR006685 Mechanosensitive ion channel MscS AMQ28_00525 IPR030192 Miniconductance mechanosensitive channel YbdG AMQ28_00525 IPR010920 LSM domain superfamily AMQ28_00525 IPR011066 Mechanosensitive ion channel MscS, C-terminal AMQ28_00530 IPR018636 Protein of unknown function DUF2058 AMQ28_00540 IPR036397 Ribonuclease H superfamily AMQ28_00540 IPR012337 Ribonuclease H-like superfamily AMQ28_00540 IPR001584 Integrase, catalytic core AMQ28_00540 IPR025948 HTH-like domain AMQ28_00545 IPR023025 Serine/threonine transporter SstT AMQ28_00545 IPR001991 Sodium:dicarboxylate symporter AMQ28_00545 IPR036458 Sodium:dicarboxylate symporter superfamily AMQ28_00550 IPR002645 STAS domain AMQ28_00550 IPR001902 SLC26A/SulP transporter AMQ28_00550 IPR011547 SLC26A/SulP transporter domain AMQ28_00550 IPR036513 STAS domain superfamily AMQ28_00555 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase AMQ28_00555 IPR041728 GPAT/DHAPAT, acyltransferase domain AMQ28_00555 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB AMQ28_00555 IPR002123 Phospholipid/glycerol acyltransferase AMQ28_00560 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMQ28_00560 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AMQ28_00560 IPR005859 Cysteine synthase CysK AMQ28_00560 IPR001926 Pyridoxal-phosphate dependent enzyme AMQ28_00560 IPR005856 Cysteine synthase AMQ28_00565 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_00565 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_00565 IPR005119 LysR, substrate-binding AMQ28_00565 IPR037416 Nodulation protein D, PBP2 AMQ28_00565 IPR000847 Transcription regulator HTH, LysR AMQ28_00570 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMQ28_00570 IPR013571 Transcription regulator QacR, C-terminal AMQ28_00570 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMQ28_00570 IPR001647 DNA-binding HTH domain, TetR-type AMQ28_00570 IPR009057 Homeobox-like domain superfamily AMQ28_00575 IPR026968 3-oxoadipate enol-lactonase 1/2 AMQ28_00575 IPR022742 Serine aminopeptidase, S33 AMQ28_00575 IPR000073 Alpha/beta hydrolase fold-1 AMQ28_00575 IPR029058 Alpha/Beta hydrolase fold AMQ28_00580 IPR020610 Thiolase, active site AMQ28_00580 IPR020617 Thiolase, C-terminal AMQ28_00580 IPR020613 Thiolase, conserved site AMQ28_00580 IPR020616 Thiolase, N-terminal AMQ28_00580 IPR020615 Thiolase, acyl-enzyme intermediate active site AMQ28_00580 IPR016039 Thiolase-like AMQ28_00580 IPR002155 Thiolase AMQ28_00580 IPR012793 Beta-ketoadipyl CoA thiolase AMQ28_00585 IPR012791 3-oxoacid CoA-transferase, subunit B AMQ28_00585 IPR004164 Coenzyme A transferase active site AMQ28_00585 IPR037171 NagB/RpiA transferase-like AMQ28_00585 IPR004165 Coenzyme A transferase family I AMQ28_00590 IPR004165 Coenzyme A transferase family I AMQ28_00590 IPR037171 NagB/RpiA transferase-like AMQ28_00590 IPR004163 Coenzyme A transferase binding site AMQ28_00590 IPR012792 3-oxoacid CoA-transferase, subunit A AMQ28_00595 IPR004711 Benzoate transporter AMQ28_00600 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_00600 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMQ28_00600 IPR036291 NAD(P)-binding domain superfamily AMQ28_00605 IPR012675 Beta-grasp domain superfamily AMQ28_00605 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMQ28_00605 IPR017927 FAD-binding domain, ferredoxin reductase-type AMQ28_00605 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMQ28_00605 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMQ28_00605 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMQ28_00605 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMQ28_00605 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMQ28_00605 IPR036010 2Fe-2S ferredoxin-like superfamily AMQ28_00605 IPR017938 Riboflavin synthase-like beta-barrel AMQ28_00610 IPR017641 Benzoate 1,2-dioxygenase, small subunit AMQ28_00610 IPR000391 Ring-hydroxylating dioxygenase beta subunit AMQ28_00610 IPR032710 NTF2-like domain superfamily AMQ28_00615 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AMQ28_00615 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site AMQ28_00615 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain AMQ28_00615 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit AMQ28_00615 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMQ28_00615 IPR017639 Benzoate 1,2-dioxygenase, large subunit AMQ28_00620 IPR015889 Intradiol ring-cleavage dioxygenase, core AMQ28_00620 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal AMQ28_00620 IPR012801 Catechol 1,2-dioxygenase, proteobacteria AMQ28_00620 IPR007535 Catechol dioxygenase, N-terminal AMQ28_00625 IPR011008 Dimeric alpha-beta barrel AMQ28_00625 IPR003464 Muconolactone delta-isomerase AMQ28_00625 IPR026029 Muconolactone isomerase domain AMQ28_00630 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMQ28_00630 IPR029017 Enolase-like, N-terminal AMQ28_00630 IPR036849 Enolase-like, C-terminal domain superfamily AMQ28_00630 IPR029065 Enolase C-terminal domain-like AMQ28_00630 IPR013370 Muconate/chloromuconate cycloisomerase AMQ28_00630 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AMQ28_00630 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMQ28_00635 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_00635 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_00635 IPR000847 Transcription regulator HTH, LysR AMQ28_00635 IPR005119 LysR, substrate-binding AMQ28_00640 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family AMQ28_00640 IPR005829 Sugar transporter, conserved site AMQ28_00640 IPR036259 MFS transporter superfamily AMQ28_00640 IPR011701 Major facilitator superfamily AMQ28_00640 IPR020846 Major facilitator superfamily domain AMQ28_00650 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMQ28_00650 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain AMQ28_00650 IPR017927 FAD-binding domain, ferredoxin reductase-type AMQ28_00650 IPR001094 Flavodoxin-like AMQ28_00650 IPR008254 Flavodoxin/nitric oxide synthase AMQ28_00650 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMQ28_00650 IPR029039 Flavoprotein-like superfamily AMQ28_00650 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMQ28_00650 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily AMQ28_00650 IPR017938 Riboflavin synthase-like beta-barrel AMQ28_00650 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria AMQ28_00650 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding AMQ28_00655 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_00655 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_00655 IPR023187 Transcriptional regulator MarR-type, conserved site AMQ28_00655 IPR000835 MarR-type HTH domain AMQ28_00660 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family AMQ28_00660 IPR011701 Major facilitator superfamily AMQ28_00660 IPR020846 Major facilitator superfamily domain AMQ28_00660 IPR036259 MFS transporter superfamily AMQ28_00660 IPR005829 Sugar transporter, conserved site AMQ28_00665 IPR006160 Short chain fatty acid transporter AtoE AMQ28_00665 IPR006161 Conserved hypothetical protein CHP00336 AMQ28_00670 IPR004164 Coenzyme A transferase active site AMQ28_00670 IPR004165 Coenzyme A transferase family I AMQ28_00670 IPR037171 NagB/RpiA transferase-like AMQ28_00670 IPR012791 3-oxoacid CoA-transferase, subunit B AMQ28_00675 IPR037171 NagB/RpiA transferase-like AMQ28_00675 IPR004163 Coenzyme A transferase binding site AMQ28_00675 IPR012792 3-oxoacid CoA-transferase, subunit A AMQ28_00675 IPR004165 Coenzyme A transferase family I AMQ28_00680 IPR013785 Aldolase-type TIM barrel AMQ28_00680 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site AMQ28_00680 IPR000891 Pyruvate carboxyltransferase AMQ28_00680 IPR027167 Hydroxymethylglutaryl-CoA lyase AMQ28_00685 IPR016185 Pre-ATP-grasp domain superfamily AMQ28_00685 IPR011764 Biotin carboxylation domain AMQ28_00685 IPR005482 Biotin carboxylase, C-terminal AMQ28_00685 IPR011053 Single hybrid motif AMQ28_00685 IPR005481 Biotin carboxylase-like, N-terminal domain AMQ28_00685 IPR011761 ATP-grasp fold AMQ28_00685 IPR000089 Biotin/lipoyl attachment AMQ28_00685 IPR011054 Rudiment single hybrid motif AMQ28_00685 IPR001882 Biotin-binding site AMQ28_00685 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMQ28_00690 IPR029045 ClpP/crotonase-like domain superfamily AMQ28_00690 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMQ28_00690 IPR001753 Enoyl-CoA hydratase/isomerase AMQ28_00690 IPR014748 Enoyl-CoA hydratase, C-terminal AMQ28_00695 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AMQ28_00695 IPR034733 Acetyl-CoA carboxylase AMQ28_00695 IPR029045 ClpP/crotonase-like domain superfamily AMQ28_00695 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AMQ28_00700 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMQ28_00700 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMQ28_00700 IPR006089 Acyl-CoA dehydrogenase, conserved site AMQ28_00700 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMQ28_00700 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMQ28_00700 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMQ28_00700 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMQ28_00705 IPR041642 HTH-type transcriptional repressor KstR, C-terminal AMQ28_00705 IPR001647 DNA-binding HTH domain, TetR-type AMQ28_00705 IPR009057 Homeobox-like domain superfamily AMQ28_00710 IPR025110 AMP-binding enzyme, C-terminal domain AMQ28_00710 IPR020845 AMP-binding, conserved site AMQ28_00710 IPR000873 AMP-dependent synthetase/ligase AMQ28_00725 IPR036291 NAD(P)-binding domain superfamily AMQ28_00725 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AMQ28_00725 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMQ28_00725 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMQ28_00725 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AMQ28_00725 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AMQ28_00725 IPR011548 3-hydroxyisobutyrate dehydrogenase AMQ28_00725 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMQ28_00730 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMQ28_00730 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMQ28_00730 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMQ28_00730 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMQ28_00730 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMQ28_00730 IPR006089 Acyl-CoA dehydrogenase, conserved site AMQ28_00730 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMQ28_00735 IPR014748 Enoyl-CoA hydratase, C-terminal AMQ28_00735 IPR001753 Enoyl-CoA hydratase/isomerase AMQ28_00735 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMQ28_00735 IPR029045 ClpP/crotonase-like domain superfamily AMQ28_00745 IPR001451 Hexapeptide repeat AMQ28_00745 IPR023446 Carnitine operon protein CaiE AMQ28_00745 IPR011004 Trimeric LpxA-like superfamily AMQ28_00750 IPR003776 YcaO-like domain AMQ28_00750 IPR041080 YcaO cyclodehydratase, C-terminal AMQ28_00755 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_00755 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_00755 IPR005471 Transcription regulator IclR, N-terminal AMQ28_00755 IPR014757 Transcription regulator IclR, C-terminal AMQ28_00755 IPR029016 GAF-like domain superfamily AMQ28_00755 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR AMQ28_00765 IPR024925 Malonyl CoA-acyl carrier protein transacylase AMQ28_00765 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMQ28_00765 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMQ28_00765 IPR001227 Acyl transferase domain superfamily AMQ28_00765 IPR014043 Acyl transferase AMQ28_00765 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type AMQ28_00780 IPR037400 Malonate utilization transcriptional regulator, PBP2 domain AMQ28_00780 IPR005119 LysR, substrate-binding AMQ28_00780 IPR000847 Transcription regulator HTH, LysR AMQ28_00780 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_00780 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_00785 IPR000868 Isochorismatase-like AMQ28_00785 IPR036380 Isochorismatase-like superfamily AMQ28_00800 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMQ28_00800 IPR001279 Metallo-beta-lactamase AMQ28_00810 IPR012337 Ribonuclease H-like superfamily AMQ28_00810 IPR025948 HTH-like domain AMQ28_00810 IPR001584 Integrase, catalytic core AMQ28_00810 IPR036397 Ribonuclease H superfamily AMQ28_00840 IPR000522 ABC transporter, permease protein, BtuC-like AMQ28_00840 IPR037294 ABC transporter, BtuC-like AMQ28_00845 IPR012910 TonB-dependent receptor, plug domain AMQ28_00845 IPR037066 TonB-dependent receptor, plug domain superfamily AMQ28_00845 IPR039423 TonB-dependent receptor-like AMQ28_00845 IPR000531 TonB-dependent receptor-like, beta-barrel AMQ28_00845 IPR010105 TonB-dependent siderophore receptor AMQ28_00845 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMQ28_00850 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_00850 IPR004839 Aminotransferase, class I/classII AMQ28_00850 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_00850 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_00850 IPR000524 Transcription regulator HTH, GntR AMQ28_00850 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_00850 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_00860 IPR000917 Sulfatase, N-terminal AMQ28_00860 IPR017850 Alkaline-phosphatase-like, core domain superfamily AMQ28_00860 IPR024607 Sulfatase, conserved site AMQ28_00865 IPR016187 C-type lectin fold AMQ28_00865 IPR042095 Sulfatase-modifying factor enzyme superfamily AMQ28_00865 IPR005532 Sulfatase-modifying factor enzyme AMQ28_00875 IPR006276 Cobalamin-independent methionine synthase AMQ28_00875 IPR038071 UROD/MetE-like superfamily AMQ28_00875 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal AMQ28_00875 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal AMQ28_00880 IPR012349 FMN-binding split barrel AMQ28_00880 IPR019917 FMN reductase (NADH) RutF AMQ28_00880 IPR002563 Flavin reductase like domain AMQ28_00885 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR AMQ28_00885 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_00885 IPR014757 Transcription regulator IclR, C-terminal AMQ28_00885 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_00885 IPR029016 GAF-like domain superfamily AMQ28_00885 IPR005471 Transcription regulator IclR, N-terminal AMQ28_00890 IPR012733 4-hydroxybenzoate 3-monooxygenase AMQ28_00890 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_00890 IPR002938 FAD-binding domain AMQ28_00895 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMQ28_00895 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_00895 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_00895 IPR003660 HAMP domain AMQ28_00895 IPR006290 Heavy metal sensor kinase AMQ28_00895 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMQ28_00895 IPR005467 Histidine kinase domain AMQ28_00895 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMQ28_00900 IPR039420 Transcriptional regulatory protein WalR-like AMQ28_00900 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_00900 IPR001867 OmpR/PhoB-type DNA-binding domain AMQ28_00900 IPR011006 CheY-like superfamily AMQ28_00900 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response AMQ28_00900 IPR001789 Signal transduction response regulator, receiver domain AMQ28_00905 IPR005624 Haem-degrading AMQ28_00905 IPR038084 GlcG-like domain superfamily AMQ28_00910 IPR014306 Hydroxyisourate hydrolase AMQ28_00910 IPR023418 Transthyretin, thyroxine binding site AMQ28_00910 IPR000895 Transthyretin/hydroxyisourate hydrolase AMQ28_00910 IPR023416 Transthyretin/hydroxyisourate hydrolase domain AMQ28_00910 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily AMQ28_00910 IPR023419 Transthyretin, conserved site AMQ28_00920 IPR036291 NAD(P)-binding domain superfamily AMQ28_00920 IPR013154 Alcohol dehydrogenase, N-terminal AMQ28_00920 IPR020843 Polyketide synthase, enoylreductase domain AMQ28_00920 IPR011032 GroES-like superfamily AMQ28_00920 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMQ28_00920 IPR013149 Alcohol dehydrogenase, C-terminal AMQ28_00925 IPR003819 TauD/TfdA-like domain AMQ28_00925 IPR042098 Taurine dioxygenase TauD-like superfamily AMQ28_00935 IPR001207 Transposase, mutator type AMQ28_00940 IPR020846 Major facilitator superfamily domain AMQ28_00940 IPR023495 Sugar efflux transporter, putative AMQ28_00940 IPR036259 MFS transporter superfamily AMQ28_00940 IPR011701 Major facilitator superfamily AMQ28_00955 IPR018383 Uncharacterised protein family UPF0324, prokaryote AMQ28_00970 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_00970 IPR017631 Salicylate 1-monooxygenase AMQ28_00970 IPR002938 FAD-binding domain AMQ28_00975 IPR015889 Intradiol ring-cleavage dioxygenase, core AMQ28_00975 IPR007535 Catechol dioxygenase, N-terminal AMQ28_00975 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal AMQ28_00975 IPR012801 Catechol 1,2-dioxygenase, proteobacteria AMQ28_00980 IPR020846 Major facilitator superfamily domain AMQ28_00980 IPR036259 MFS transporter superfamily AMQ28_00980 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family AMQ28_00980 IPR005829 Sugar transporter, conserved site AMQ28_00980 IPR011701 Major facilitator superfamily AMQ28_00990 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AMQ28_00990 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AMQ28_00990 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMQ28_00990 IPR006249 Aconitase/Iron-responsive element-binding protein 2 AMQ28_00990 IPR036008 Aconitase, iron-sulfur domain AMQ28_00990 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AMQ28_00990 IPR018136 Aconitase family, 4Fe-4S cluster binding site AMQ28_00995 IPR012893 HipA-like, C-terminal AMQ28_00995 IPR017508 HipA, N-terminal subdomain 1 AMQ28_01005 IPR036361 SAP domain superfamily AMQ28_01005 IPR018668 DNA-binding protein VF530-like AMQ28_01020 IPR001584 Integrase, catalytic core AMQ28_01020 IPR036397 Ribonuclease H superfamily AMQ28_01020 IPR009057 Homeobox-like domain superfamily AMQ28_01020 IPR012337 Ribonuclease H-like superfamily AMQ28_01025 IPR000073 Alpha/beta hydrolase fold-1 AMQ28_01025 IPR029058 Alpha/Beta hydrolase fold AMQ28_01030 IPR001279 Metallo-beta-lactamase AMQ28_01030 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMQ28_01050 IPR036286 LexA/Signal peptidase-like superfamily AMQ28_01050 IPR006197 Peptidase S24, LexA-like AMQ28_01050 IPR015927 Peptidase S24/S26A/S26B/S26C AMQ28_01050 IPR039418 LexA-like AMQ28_01060 IPR017961 DNA polymerase, Y-family, little finger domain AMQ28_01060 IPR036775 DNA polymerase, Y-family, little finger domain superfamily AMQ28_01060 IPR001126 UmuC domain AMQ28_01060 IPR025188 Domain of unknown function DUF4113 AMQ28_01065 IPR036441 Dehydroquinase, class II superfamily AMQ28_01065 IPR018509 Dehydroquinase, class II, conserved site AMQ28_01065 IPR001874 Dehydroquinase, class II AMQ28_01070 IPR001882 Biotin-binding site AMQ28_01070 IPR011053 Single hybrid motif AMQ28_01070 IPR001249 Acetyl-CoA biotin carboxyl carrier AMQ28_01070 IPR000089 Biotin/lipoyl attachment AMQ28_01075 IPR011764 Biotin carboxylation domain AMQ28_01075 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase AMQ28_01075 IPR011761 ATP-grasp fold AMQ28_01075 IPR013815 ATP-grasp fold, subdomain 1 AMQ28_01075 IPR011054 Rudiment single hybrid motif AMQ28_01075 IPR005482 Biotin carboxylase, C-terminal AMQ28_01075 IPR005481 Biotin carboxylase-like, N-terminal domain AMQ28_01075 IPR016185 Pre-ATP-grasp domain superfamily AMQ28_01075 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMQ28_01085 IPR000120 Amidase AMQ28_01085 IPR036928 Amidase signature (AS) superfamily AMQ28_01085 IPR023631 Amidase signature domain AMQ28_01085 IPR020556 Amidase, conserved site AMQ28_01110 IPR023753 FAD/NAD(P)-binding domain AMQ28_01110 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AMQ28_01110 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_01110 IPR013785 Aldolase-type TIM barrel AMQ28_01125 IPR005119 LysR, substrate-binding AMQ28_01125 IPR000847 Transcription regulator HTH, LysR AMQ28_01125 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_01125 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_01130 IPR001714 Peptidase M24, methionine aminopeptidase AMQ28_01130 IPR000994 Peptidase M24 AMQ28_01130 IPR036005 Creatinase/aminopeptidase-like AMQ28_01130 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 AMQ28_01135 IPR025668 Transposase DDE domain AMQ28_01140 IPR004685 Branched-chain amino acid transport system II carrier protein AMQ28_01185 IPR004445 Sodium/glutamate symport carrier protein GltS AMQ28_01200 IPR004406 Aconitase B AMQ28_01200 IPR015933 Aconitase B, HEAT-like domain AMQ28_01200 IPR015929 Aconitase B, swivel AMQ28_01200 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMQ28_01200 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AMQ28_01200 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AMQ28_01200 IPR036288 Aconitase B, HEAT-like domain superfamily AMQ28_01200 IPR015932 Aconitase, domain 2 AMQ28_01200 IPR018136 Aconitase family, 4Fe-4S cluster binding site AMQ28_01200 IPR036008 Aconitase, iron-sulfur domain AMQ28_01225 IPR011129 Cold shock domain AMQ28_01225 IPR012156 Cold shock, CspA AMQ28_01225 IPR019844 Cold-shock (CSD) domain AMQ28_01225 IPR002059 Cold-shock protein, DNA-binding AMQ28_01225 IPR012340 Nucleic acid-binding, OB-fold AMQ28_01255 IPR034746 POTRA domain AMQ28_01255 IPR035243 TamA, POTRA domain 1 AMQ28_01255 IPR010827 POTRA domain, BamA/TamA-like AMQ28_01255 IPR000184 Bacterial surface antigen (D15) AMQ28_01255 IPR039910 Surface antigen D15-like AMQ28_01260 IPR011701 Major facilitator superfamily AMQ28_01260 IPR036259 MFS transporter superfamily AMQ28_01260 IPR023727 Lysophospholipid transporter LplT AMQ28_01265 IPR009078 Ferritin-like superfamily AMQ28_01265 IPR011566 Ubiquinone biosynthesis protein Coq7 AMQ28_01280 IPR006156 Dihydroneopterin aldolase AMQ28_01280 IPR006157 Dihydroneopterin aldolase/epimerase domain AMQ28_01285 IPR011009 Protein kinase-like domain superfamily AMQ28_01285 IPR004147 UbiB domain AMQ28_01285 IPR000719 Protein kinase domain AMQ28_01290 IPR012730 Molybdopterin synthase sulfurylase MoeB AMQ28_01290 IPR000594 THIF-type NAD/FAD binding fold AMQ28_01290 IPR035985 Ubiquitin-activating enzyme AMQ28_01295 IPR020845 AMP-binding, conserved site AMQ28_01295 IPR025110 AMP-binding enzyme, C-terminal domain AMQ28_01295 IPR000873 AMP-dependent synthetase/ligase AMQ28_01295 IPR042099 AMP-dependent synthetase-like superfamily AMQ28_01300 IPR036291 NAD(P)-binding domain superfamily AMQ28_01300 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMQ28_01300 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_01305 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AMQ28_01305 IPR009057 Homeobox-like domain superfamily AMQ28_01305 IPR018060 DNA binding HTH domain, AraC-type AMQ28_01305 IPR020449 Transcription regulator HTH, AraC- type AMQ28_01320 IPR035906 MetI-like superfamily AMQ28_01320 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMQ28_01325 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMQ28_01325 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific AMQ28_01325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_01325 IPR004556 Methyltransferase HemK-like AMQ28_01325 IPR040758 Release factor glutamine methyltransferase, N-terminal domain AMQ28_01325 IPR025714 Methyltransferase domain AMQ28_01330 IPR005139 Peptide chain release factor AMQ28_01330 IPR004373 Peptide chain release factor 1 AMQ28_01330 IPR000352 Peptide chain release factor class I AMQ28_01345 IPR019949 Luciferase family oxidoreductase, group 1 AMQ28_01345 IPR036661 Luciferase-like domain superfamily AMQ28_01345 IPR011251 Luciferase-like domain AMQ28_01350 IPR038972 Inner membrane protein YiaA-like AMQ28_01350 IPR008024 YiaAB two helix AMQ28_01365 IPR026530 Phosphoenolpyruvate synthase regulatory protein AMQ28_01365 IPR005177 Bifunctional kinase-pyrophosphorylase AMQ28_01370 IPR000121 PEP-utilising enzyme, C-terminal AMQ28_01370 IPR018274 PEP-utilising enzyme, active site AMQ28_01370 IPR006319 Phosphoenolpyruvate synthase AMQ28_01370 IPR008279 PEP-utilising enzyme, mobile domain AMQ28_01370 IPR013815 ATP-grasp fold, subdomain 1 AMQ28_01370 IPR036637 Phosphohistidine domain superfamily AMQ28_01370 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding AMQ28_01370 IPR023151 PEP-utilising enzyme, conserved site AMQ28_01370 IPR040442 Pyruvate kinase-like domain superfamily AMQ28_01370 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMQ28_01380 IPR010514 COX aromatic rich motif AMQ28_01380 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain AMQ28_01380 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain AMQ28_01380 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily AMQ28_01380 IPR008972 Cupredoxin AMQ28_01380 IPR002429 Cytochrome c oxidase subunit II-like C-terminal AMQ28_01380 IPR006333 Cytochrome o ubiquinol oxidase subunit II AMQ28_01385 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AMQ28_01385 IPR014207 Cytochrome o ubiquinol oxidase, subunit I AMQ28_01385 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AMQ28_01385 IPR023616 Cytochrome c oxidase-like, subunit I domain AMQ28_01385 IPR000883 Cytochrome c oxidase subunit I AMQ28_01390 IPR024791 Cytochrome c oxidase subunit III AMQ28_01390 IPR000298 Cytochrome c oxidase subunit III-like AMQ28_01390 IPR035973 Cytochrome c oxidase subunit III-like superfamily AMQ28_01390 IPR014206 Cytochrome o ubiquinol oxidase, subunit III AMQ28_01390 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle AMQ28_01390 IPR033946 Ubiquinol oxidase subunit III domain AMQ28_01395 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes AMQ28_01395 IPR014210 Cytochrome o ubiquinol oxidase subunit IV AMQ28_01400 IPR006369 Protohaem IX farnesyltransferase AMQ28_01400 IPR000537 UbiA prenyltransferase family AMQ28_01400 IPR030470 UbiA prenyltransferase conserved site AMQ28_01405 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMQ28_01405 IPR035980 Ribosomal protein S6 superfamily AMQ28_01405 IPR020815 Ribosomal protein S6, conserved site AMQ28_01405 IPR000529 Ribosomal protein S6 AMQ28_01405 IPR020814 Ribosomal protein S6, plastid/chloroplast AMQ28_01410 IPR001648 Ribosomal protein S18 AMQ28_01410 IPR036870 Ribosomal protein S18 superfamily AMQ28_01410 IPR018275 Ribosomal protein S18, conserved site AMQ28_01415 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AMQ28_01415 IPR000244 Ribosomal protein L9 AMQ28_01415 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AMQ28_01415 IPR020594 Ribosomal protein L9, bacteria/chloroplast AMQ28_01415 IPR020069 Ribosomal protein L9, C-terminal AMQ28_01415 IPR020070 Ribosomal protein L9, N-terminal AMQ28_01415 IPR036935 Ribosomal protein L9, N-terminal domain superfamily AMQ28_01420 IPR007694 DNA helicase, DnaB-like, C-terminal AMQ28_01420 IPR007693 DNA helicase, DnaB-like, N-terminal AMQ28_01420 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMQ28_01420 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_01420 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily AMQ28_01420 IPR003593 AAA+ ATPase domain AMQ28_01420 IPR007692 DNA helicase, DnaB type AMQ28_01425 IPR029066 PLP-binding barrel AMQ28_01425 IPR000821 Alanine racemase AMQ28_01425 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AMQ28_01425 IPR001608 Alanine racemase, N-terminal AMQ28_01425 IPR011079 Alanine racemase, C-terminal AMQ28_01435 IPR038765 Papain-like cysteine peptidase superfamily AMQ28_01435 IPR002931 Transglutaminase-like AMQ28_01435 IPR013589 Bacterial transglutaminase-like, N-terminal AMQ28_01445 IPR016450 Uncharacterised conserved protein UCP005522 AMQ28_01445 IPR025841 Circularly permuted ATP-grasp type 2 AMQ28_01455 IPR013785 Aldolase-type TIM barrel AMQ28_01455 IPR027283 Glutamate synthase large subunit-like protein, bacteria AMQ28_01455 IPR002932 Glutamate synthase domain AMQ28_01455 IPR024188 Glutamate synthase large subunit-like protein AMQ28_01470 IPR006094 FAD linked oxidase, N-terminal AMQ28_01470 IPR016166 FAD-binding domain, PCMH-type AMQ28_01470 IPR036318 FAD-binding, type PCMH-like superfamily AMQ28_01470 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase AMQ28_01470 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal AMQ28_01470 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily AMQ28_01470 IPR016167 FAD-binding, type PCMH, subdomain 1 AMQ28_01470 IPR016169 FAD-binding, type PCMH, subdomain 2 AMQ28_01475 IPR023485 Phosphotyrosine protein phosphatase I AMQ28_01475 IPR036196 Phosphotyrosine protein phosphatase I superfamily AMQ28_01475 IPR017867 Protein-tyrosine phosphatase, low molecular weight AMQ28_01480 IPR039697 Iron-type alcohol dehydrogenase-like AMQ28_01480 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA AMQ28_01480 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AMQ28_01485 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_01485 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV AMQ28_01485 IPR022754 DNA polymerase III, gamma subunit, domain III AMQ28_01485 IPR003593 AAA+ ATPase domain AMQ28_01485 IPR012763 DNA polymerase III, subunit gamma/ tau AMQ28_01485 IPR021029 DNA polymerase III, tau subunit, domain V AMQ28_01485 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AMQ28_01485 IPR001270 ClpA/B family AMQ28_01485 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily AMQ28_01495 IPR012338 Beta-lactamase/transpeptidase-like AMQ28_01495 IPR001466 Beta-lactamase-related AMQ28_01505 IPR036291 NAD(P)-binding domain superfamily AMQ28_01505 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_01505 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMQ28_01510 IPR016039 Thiolase-like AMQ28_01510 IPR020616 Thiolase, N-terminal AMQ28_01510 IPR020617 Thiolase, C-terminal AMQ28_01510 IPR012806 Acetyl-CoA C-acyltransferase FadI AMQ28_01510 IPR020610 Thiolase, active site AMQ28_01510 IPR002155 Thiolase AMQ28_01525 IPR005119 LysR, substrate-binding AMQ28_01525 IPR000847 Transcription regulator HTH, LysR AMQ28_01525 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_01525 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_01530 IPR018225 Transaldolase, active site AMQ28_01530 IPR004730 Transaldolase type 1 AMQ28_01530 IPR001585 Transaldolase/Fructose-6-phosphate aldolase AMQ28_01530 IPR013785 Aldolase-type TIM barrel AMQ28_01535 IPR004778 Homoserine/Threonine efflux protein AMQ28_01535 IPR001123 Amino acid exporter protein, LeuE-type AMQ28_01540 IPR004711 Benzoate transporter AMQ28_01545 IPR000390 Small multidrug resistance protein family AMQ28_01550 IPR006016 UspA AMQ28_01550 IPR006015 Universal stress protein A family AMQ28_01550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_01555 IPR006016 UspA AMQ28_01570 IPR027268 Peptidase M4/M1, CTD superfamily AMQ28_01570 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily AMQ28_01570 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AMQ28_01570 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AMQ28_01570 IPR014782 Peptidase M1, membrane alanine aminopeptidase AMQ28_01570 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase AMQ28_01570 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily AMQ28_01570 IPR042097 Aminopeptidase N-like , N-terminal AMQ28_01570 IPR012779 Peptidase M1, alanyl aminopeptidase AMQ28_01590 IPR029056 Ribokinase-like AMQ28_01590 IPR000417 Hydroxyethylthiazole kinase AMQ28_01595 IPR016169 FAD-binding, type PCMH, subdomain 2 AMQ28_01595 IPR036318 FAD-binding, type PCMH-like superfamily AMQ28_01595 IPR000644 CBS domain AMQ28_01595 IPR005496 Integral membrane protein TerC AMQ28_01595 IPR005170 Transporter-associated domain AMQ28_01610 IPR016160 Aldehyde dehydrogenase, cysteine active site AMQ28_01610 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMQ28_01610 IPR016161 Aldehyde/histidinol dehydrogenase AMQ28_01610 IPR015590 Aldehyde dehydrogenase domain AMQ28_01610 IPR016163 Aldehyde dehydrogenase, C-terminal AMQ28_01610 IPR016162 Aldehyde dehydrogenase, N-terminal AMQ28_01615 IPR006253 Malate synthase G AMQ28_01615 IPR023310 Malate synthase G, beta sub-domain AMQ28_01615 IPR001465 Malate synthase AMQ28_01615 IPR011076 Malate synthase-like superfamily AMQ28_01620 IPR030870 Cell division protein ZapE AMQ28_01620 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_01620 IPR005654 ATPase, AFG1-like AMQ28_01625 IPR005642 Lysine exporter LysO AMQ28_01630 IPR001754 Orotidine 5'-phosphate decarboxylase domain AMQ28_01630 IPR013785 Aldolase-type TIM barrel AMQ28_01630 IPR014732 Orotidine 5'-phosphate decarboxylase AMQ28_01630 IPR018089 Orotidine 5'-phosphate decarboxylase, active site AMQ28_01630 IPR011060 Ribulose-phosphate binding barrel AMQ28_01640 IPR005685 Integration host factor, beta subunit AMQ28_01640 IPR000119 Histone-like DNA-binding protein AMQ28_01640 IPR020816 Histone-like DNA-binding protein, conserved site AMQ28_01640 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AMQ28_01645 IPR000110 Ribosomal protein S1 AMQ28_01645 IPR022967 RNA-binding domain, S1 AMQ28_01645 IPR012340 Nucleic acid-binding, OB-fold AMQ28_01645 IPR003029 S1 domain AMQ28_01650 IPR011994 Cytidylate kinase domain AMQ28_01650 IPR003136 Cytidylate kinase AMQ28_01650 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_01660 IPR028883 tRNA-specific adenosine deaminase AMQ28_01660 IPR002125 Cytidine and deoxycytidylate deaminase domain AMQ28_01660 IPR016193 Cytidine deaminase-like AMQ28_01660 IPR016192 APOBEC/CMP deaminase, zinc-binding AMQ28_01670 IPR002043 Uracil-DNA glycosylase family 1 AMQ28_01670 IPR018085 Uracil-DNA glycosylase, active site AMQ28_01670 IPR036895 Uracil-DNA glycosylase-like domain superfamily AMQ28_01670 IPR005122 Uracil-DNA glycosylase-like AMQ28_01680 IPR005628 General secretion pathway protein K AMQ28_01680 IPR038072 GspK, central domain superfamily AMQ28_01685 IPR012902 Prokaryotic N-terminal methylation site AMQ28_01685 IPR010055 Type II secretion system protein J AMQ28_01690 IPR003413 Type II secretion system protein I domain AMQ28_01690 IPR010052 Type II secretion system protein I AMQ28_01690 IPR012902 Prokaryotic N-terminal methylation site AMQ28_01695 IPR012902 Prokaryotic N-terminal methylation site AMQ28_01695 IPR002416 Type II secretion system protein H AMQ28_01695 IPR022346 General secretion pathway, GspH AMQ28_01700 IPR009057 Homeobox-like domain superfamily AMQ28_01700 IPR001647 DNA-binding HTH domain, TetR-type AMQ28_01705 IPR015991 Uncharacterised hydrolase TatD-type AMQ28_01705 IPR018228 Deoxyribonuclease, TatD-related, conserved site AMQ28_01705 IPR001130 TatD family AMQ28_01705 IPR032466 Metal-dependent hydrolase AMQ28_01715 IPR015199 DNA polymerase III, delta subunit, C-terminal AMQ28_01715 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_01715 IPR004622 DNA polymerase III, delta prime subunit AMQ28_01720 IPR029044 Nucleotide-diphospho-sugar transferases AMQ28_01720 IPR003329 Acylneuraminate cytidylyltransferase AMQ28_01720 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase AMQ28_01725 IPR003758 Tetraacyldisaccharide 4'-kinase AMQ28_01725 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_01730 IPR039421 Type I protein exporter AMQ28_01730 IPR003439 ABC transporter-like AMQ28_01730 IPR017871 ABC transporter, conserved site AMQ28_01730 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMQ28_01730 IPR011527 ABC transporter type 1, transmembrane domain AMQ28_01730 IPR011917 ABC transporter, lipid A export, MsbA AMQ28_01730 IPR003593 AAA+ ATPase domain AMQ28_01730 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_01740 IPR002898 MotA/TolQ/ExbB proton channel AMQ28_01745 IPR041468 ParB/Spo0J, HTH domain AMQ28_01745 IPR036086 ParB/Sulfiredoxin superfamily AMQ28_01745 IPR003115 ParB/Sulfiredoxin AMQ28_01745 IPR004437 ParB/RepB/Spo0J partition protein AMQ28_01750 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_01750 IPR025669 AAA domain AMQ28_01755 IPR003682 rRNA small subunit methyltransferase G AMQ28_01755 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_01760 IPR005835 Nucleotidyl transferase domain AMQ28_01760 IPR029044 Nucleotide-diphospho-sugar transferases AMQ28_01765 IPR011009 Protein kinase-like domain superfamily AMQ28_01765 IPR002575 Aminoglycoside phosphotransferase AMQ28_01770 IPR020889 LPS-assembly protein LptD AMQ28_01770 IPR007543 LptD, C-terminal AMQ28_01770 IPR005653 Organic solvent tolerance-like, N-terminal AMQ28_01775 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AMQ28_01775 IPR015391 SurA N-terminal AMQ28_01775 IPR023034 Peptidyl-prolyl isomerase SurA AMQ28_01775 IPR027304 Trigger factor/SurA domain superfamily AMQ28_01780 IPR005001 RNA-binding protein Hfq AMQ28_01780 IPR010920 LSM domain superfamily AMQ28_01785 IPR018022 IPP transferase AMQ28_01785 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_01785 IPR039657 Dimethylallyltransferase AMQ28_01790 IPR020667 DNA mismatch repair protein, MutL AMQ28_01790 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMQ28_01790 IPR014762 DNA mismatch repair, conserved site AMQ28_01790 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_01790 IPR037198 MutL, C-terminal domain superfamily AMQ28_01790 IPR042121 MutL, C-terminal domain, regulatory subdomain AMQ28_01790 IPR013507 DNA mismatch repair protein, S5 domain 2-like AMQ28_01790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_01790 IPR002099 DNA mismatch repair protein family, N-terminal AMQ28_01790 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms AMQ28_01790 IPR042120 MutL, C-terminal domain, dimerisation subdomain AMQ28_01790 IPR014790 MutL, C-terminal, dimerisation AMQ28_01795 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE AMQ28_01795 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_01800 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMQ28_01800 IPR002942 RNA-binding S4 domain AMQ28_01800 IPR006145 Pseudouridine synthase, RsuA/RluA AMQ28_01800 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AMQ28_01800 IPR036986 RNA-binding S4 domain superfamily AMQ28_01800 IPR006225 Pseudouridine synthase, RluC/RluD AMQ28_01815 IPR036986 RNA-binding S4 domain superfamily AMQ28_01815 IPR002942 RNA-binding S4 domain AMQ28_01815 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AMQ28_01815 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AMQ28_01815 IPR006145 Pseudouridine synthase, RsuA/RluA AMQ28_01815 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMQ28_01815 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AMQ28_01820 IPR007382 Uncharacterised protein family UPF0756, transmembrame AMQ28_01825 IPR029787 Nucleotide cyclase AMQ28_01825 IPR000160 GGDEF domain AMQ28_01825 IPR005330 MHYT domain AMQ28_01825 IPR035919 EAL domain superfamily AMQ28_01825 IPR001633 EAL domain AMQ28_01830 IPR005119 LysR, substrate-binding AMQ28_01830 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain AMQ28_01830 IPR000847 Transcription regulator HTH, LysR AMQ28_01830 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_01830 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_01835 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_01835 IPR003593 AAA+ ATPase domain AMQ28_01835 IPR010285 DNA helicase Pif1-like AMQ28_01835 IPR029491 Helicase Helix-turn-helix domain AMQ28_01845 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AMQ28_01845 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMQ28_01845 IPR016039 Thiolase-like AMQ28_01845 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AMQ28_01850 IPR011709 Domain of unknown function DUF1605 AMQ28_01850 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_01850 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMQ28_01850 IPR001650 Helicase, C-terminal AMQ28_01850 IPR024590 RNA helicase HrpA, C-terminal AMQ28_01850 IPR003593 AAA+ ATPase domain AMQ28_01850 IPR010222 RNA helicase HrpA AMQ28_01850 IPR007502 Helicase-associated domain AMQ28_01850 IPR011545 DEAD/DEAH box helicase domain AMQ28_01855 IPR013766 Thioredoxin domain AMQ28_01855 IPR036249 Thioredoxin-like superfamily AMQ28_01855 IPR019479 Peroxiredoxin, C-terminal AMQ28_01855 IPR024706 Peroxiredoxin, AhpC-type AMQ28_01855 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AMQ28_01855 IPR017559 Alkyl hydroperoxide reductase subunit C AMQ28_01865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_01865 IPR002935 Class I-like SAM-dependent O-methyltransferase AMQ28_01875 IPR012336 Thioredoxin-like fold AMQ28_01875 IPR036249 Thioredoxin-like superfamily AMQ28_01875 IPR012081 Alkyl hydroperoxide reductase subunit F AMQ28_01875 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_01875 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AMQ28_01875 IPR023753 FAD/NAD(P)-binding domain AMQ28_01875 IPR002109 Glutaredoxin AMQ28_01890 IPR007272 Sulphur transport domain AMQ28_01910 IPR004136 Nitronate monooxygenase AMQ28_01910 IPR013785 Aldolase-type TIM barrel AMQ28_01915 IPR035587 DUS-like, FMN-binding domain AMQ28_01915 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal AMQ28_01915 IPR018517 tRNA-dihydrouridine synthase, conserved site AMQ28_01915 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 AMQ28_01915 IPR013785 Aldolase-type TIM barrel AMQ28_01915 IPR001269 tRNA-dihydrouridine synthase AMQ28_01915 IPR032887 tRNA-dihydrouridine synthase B AMQ28_01940 IPR014063 Arsenate resistance ArsH AMQ28_01940 IPR005025 NADPH-dependent FMN reductase-like AMQ28_01940 IPR029039 Flavoprotein-like superfamily AMQ28_01945 IPR004706 Arsenical-resistance protein Acr3 AMQ28_01945 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 AMQ28_01945 IPR038770 Sodium/solute symporter superfamily AMQ28_02000 IPR036397 Ribonuclease H superfamily AMQ28_02000 IPR001584 Integrase, catalytic core AMQ28_02000 IPR012337 Ribonuclease H-like superfamily AMQ28_02000 IPR025948 HTH-like domain AMQ28_02010 IPR011673 Protein of unknown function DUF1615 AMQ28_02020 IPR005804 Fatty acid desaturase domain AMQ28_02025 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMQ28_02025 IPR017927 FAD-binding domain, ferredoxin reductase-type AMQ28_02025 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMQ28_02025 IPR012675 Beta-grasp domain superfamily AMQ28_02025 IPR036010 2Fe-2S ferredoxin-like superfamily AMQ28_02025 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMQ28_02025 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMQ28_02025 IPR017938 Riboflavin synthase-like beta-barrel AMQ28_02025 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMQ28_02030 IPR023764 Transcriptional repressor HTH, FabR AMQ28_02030 IPR009057 Homeobox-like domain superfamily AMQ28_02030 IPR001647 DNA-binding HTH domain, TetR-type AMQ28_02035 IPR040766 RapA, N-terminal Tudor-like domain 2 AMQ28_02035 IPR040765 RapA, N-terminal Tudor like domain 1 AMQ28_02035 IPR038718 SNF2-like, N-terminal domain superfamily AMQ28_02035 IPR000330 SNF2-related, N-terminal domain AMQ28_02035 IPR022737 RNA polymerase recycling, bacterial, C-terminal AMQ28_02035 IPR001650 Helicase, C-terminal AMQ28_02035 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_02035 IPR023949 RNA polymerase-associated protein RapA AMQ28_02035 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMQ28_02040 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMQ28_02040 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AMQ28_02040 IPR006145 Pseudouridine synthase, RsuA/RluA AMQ28_02055 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_02055 IPR009057 Homeobox-like domain superfamily AMQ28_02055 IPR002514 Transposase IS3/IS911family AMQ28_02060 IPR036397 Ribonuclease H superfamily AMQ28_02060 IPR012337 Ribonuclease H-like superfamily AMQ28_02060 IPR001584 Integrase, catalytic core AMQ28_02060 IPR025948 HTH-like domain AMQ28_02070 IPR038084 GlcG-like domain superfamily AMQ28_02070 IPR005624 Haem-degrading AMQ28_02075 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_02075 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase AMQ28_02075 IPR005814 Aminotransferase class-III AMQ28_02075 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_02075 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_02080 IPR013785 Aldolase-type TIM barrel AMQ28_02080 IPR036206 Thiamin phosphate synthase superfamily AMQ28_02080 IPR022998 Thiamine phosphate synthase/TenI AMQ28_02080 IPR034291 Thiamine phosphate synthase AMQ28_02090 IPR039013 Inorganic triphosphatase YgiF AMQ28_02090 IPR023577 CYTH domain AMQ28_02090 IPR033469 CYTH-like domain superfamily AMQ28_02110 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AMQ28_02110 IPR011765 Peptidase M16, N-terminal AMQ28_02110 IPR001431 Peptidase M16, zinc-binding site AMQ28_02110 IPR007863 Peptidase M16, C-terminal AMQ28_02115 IPR003719 Phenazine biosynthesis PhzF protein AMQ28_02120 IPR001279 Metallo-beta-lactamase AMQ28_02120 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMQ28_02120 IPR017782 Hydroxyacylglutathione hydrolase AMQ28_02120 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain AMQ28_02120 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain AMQ28_02145 IPR017441 Protein kinase, ATP binding site AMQ28_02145 IPR000719 Protein kinase domain AMQ28_02145 IPR008271 Serine/threonine-protein kinase, active site AMQ28_02145 IPR011009 Protein kinase-like domain superfamily AMQ28_02145 IPR005543 PASTA domain AMQ28_02165 IPR000905 Gcp-like domain AMQ28_02165 IPR017861 Kae1/TsaD family AMQ28_02165 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD AMQ28_02165 IPR017860 Peptidase M22, conserved site AMQ28_02170 IPR001911 Ribosomal protein S21 AMQ28_02170 IPR018278 Ribosomal protein S21, conserved site AMQ28_02170 IPR038380 Ribosomal protein S21 superfamily AMQ28_02190 IPR011990 Tetratricopeptide-like helical domain superfamily AMQ28_02190 IPR030873 Beta-barrel assembly-enhancing protease AMQ28_02190 IPR019734 Tetratricopeptide repeat AMQ28_02190 IPR001915 Peptidase M48 AMQ28_02190 IPR013026 Tetratricopeptide repeat-containing domain AMQ28_02195 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMQ28_02195 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMQ28_02195 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMQ28_02195 IPR023756 Glyoxylate/hydroxypyruvate reductase B AMQ28_02195 IPR036291 NAD(P)-binding domain superfamily AMQ28_02210 IPR029057 Phosphoribosyltransferase-like AMQ28_02210 IPR000836 Phosphoribosyltransferase domain AMQ28_02210 IPR029055 Nucleophile aminohydrolases, N-terminal AMQ28_02210 IPR017932 Glutamine amidotransferase type 2 domain AMQ28_02210 IPR005854 Amidophosphoribosyltransferase AMQ28_02210 IPR035584 Amidophosphoribosyltransferase, N-terminal AMQ28_02215 IPR003825 Colicin V production, CvpA AMQ28_02220 IPR013785 Aldolase-type TIM barrel AMQ28_02220 IPR005719 Dihydroorotate dehydrogenase, class 2 AMQ28_02220 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 AMQ28_02220 IPR005720 Dihydroorotate dehydrogenase domain AMQ28_02220 IPR001295 Dihydroorotate dehydrogenase, conserved site AMQ28_02240 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMQ28_02240 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMQ28_02240 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent AMQ28_02240 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal AMQ28_02240 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal AMQ28_02240 IPR036291 NAD(P)-binding domain superfamily AMQ28_02245 IPR029479 Nitroreductase AMQ28_02245 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AMQ28_02245 IPR000415 Nitroreductase-like AMQ28_02255 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMQ28_02255 IPR023554 ATP-dependent RNA helicase RhlB type AMQ28_02255 IPR011545 DEAD/DEAH box helicase domain AMQ28_02255 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMQ28_02255 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_02255 IPR001650 Helicase, C-terminal AMQ28_02255 IPR014014 RNA helicase, DEAD-box type, Q motif AMQ28_02260 IPR019844 Cold-shock (CSD) domain AMQ28_02260 IPR012156 Cold shock, CspA AMQ28_02260 IPR002059 Cold-shock protein, DNA-binding AMQ28_02260 IPR012340 Nucleic acid-binding, OB-fold AMQ28_02260 IPR011129 Cold shock domain AMQ28_02265 IPR014284 RNA polymerase sigma-70 like domain AMQ28_02265 IPR007630 RNA polymerase sigma-70 region 4 AMQ28_02265 IPR013325 RNA polymerase sigma factor, region 2 AMQ28_02265 IPR013324 RNA polymerase sigma factor, region 3/4-like AMQ28_02265 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria AMQ28_02265 IPR000943 RNA polymerase sigma-70 AMQ28_02265 IPR009042 RNA polymerase sigma-70 region 1.2 AMQ28_02265 IPR007627 RNA polymerase sigma-70 region 2 AMQ28_02270 IPR006696 Protein of unknown function DUF423 AMQ28_02280 IPR033983 Thiazole synthase ThiG AMQ28_02280 IPR013785 Aldolase-type TIM barrel AMQ28_02280 IPR008867 Thiazole synthase AMQ28_02285 IPR007138 Antibiotic biosynthesis monooxygenase domain AMQ28_02285 IPR011008 Dimeric alpha-beta barrel AMQ28_02290 IPR003680 Flavodoxin-like fold AMQ28_02290 IPR029039 Flavoprotein-like superfamily AMQ28_02295 IPR004045 Glutathione S-transferase, N-terminal AMQ28_02295 IPR036249 Thioredoxin-like superfamily AMQ28_02295 IPR004046 Glutathione S-transferase, C-terminal AMQ28_02295 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMQ28_02295 IPR010987 Glutathione S-transferase, C-terminal-like AMQ28_02300 IPR011547 SLC26A/SulP transporter domain AMQ28_02300 IPR036513 STAS domain superfamily AMQ28_02300 IPR018045 Sulphate anion transporter, conserved site AMQ28_02300 IPR001902 SLC26A/SulP transporter AMQ28_02300 IPR002645 STAS domain AMQ28_02305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_02305 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type AMQ28_02320 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMQ28_02320 IPR006664 Outer membrane protein, bacterial AMQ28_02320 IPR008722 Outer membrane porin F, N-terminal AMQ28_02320 IPR028974 TSP type-3 repeat AMQ28_02320 IPR036737 OmpA-like domain superfamily AMQ28_02320 IPR006690 Outer membrane protein, OmpA-like, conserved site AMQ28_02320 IPR006665 OmpA-like domain AMQ28_02325 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMQ28_02325 IPR006680 Amidohydrolase-related AMQ28_02325 IPR032466 Metal-dependent hydrolase AMQ28_02325 IPR004722 Dihydroorotase AMQ28_02330 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AMQ28_02330 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AMQ28_02330 IPR002082 Aspartate carbamoyltransferase AMQ28_02330 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AMQ28_02330 IPR006130 Aspartate/ornithine carbamoyltransferase AMQ28_02340 IPR004114 THUMP domain AMQ28_02340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_02340 IPR019614 S-adenosylmethionine-dependent methyltransferase AMQ28_02340 IPR000241 Putative RNA methylase domain AMQ28_02340 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMQ28_02340 IPR017244 Ribosomal RNA large subunit methyltransferase K/L AMQ28_02355 IPR028299 ClpA/B, conserved site 2 AMQ28_02355 IPR018368 ClpA/B, conserved site 1 AMQ28_02355 IPR001270 ClpA/B family AMQ28_02355 IPR017730 Chaperonin ClpB AMQ28_02355 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_02355 IPR019489 Clp ATPase, C-terminal AMQ28_02355 IPR003593 AAA+ ATPase domain AMQ28_02355 IPR003959 ATPase, AAA-type, core AMQ28_02355 IPR004176 Clp, N-terminal AMQ28_02355 IPR036628 Clp, N-terminal domain superfamily AMQ28_02355 IPR041546 ClpA/ClpB, AAA lid domain AMQ28_02360 IPR003718 OsmC/Ohr family AMQ28_02360 IPR036102 OsmC/Ohr superfamily AMQ28_02360 IPR015946 K homology domain-like, alpha/beta AMQ28_02365 IPR000595 Cyclic nucleotide-binding domain AMQ28_02365 IPR012318 Crp-type HTH domain AMQ28_02365 IPR014710 RmlC-like jelly roll fold AMQ28_02365 IPR018488 Cyclic nucleotide-binding, conserved site AMQ28_02365 IPR018335 Transcription regulator HTH, Crp-type, conserved site AMQ28_02365 IPR018490 Cyclic nucleotide-binding-like AMQ28_02365 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_02365 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_02370 IPR036812 NADP-dependent oxidoreductase domain superfamily AMQ28_02370 IPR023210 NADP-dependent oxidoreductase domain AMQ28_02370 IPR020471 Aldo/keto reductase AMQ28_02385 IPR042109 Adenylosuccinate synthetase, domain 1 AMQ28_02385 IPR001114 Adenylosuccinate synthetase AMQ28_02385 IPR042111 Adenylosuccinate synthetase, domain 3 AMQ28_02385 IPR042110 Adenylosuccinate synthetase, domain 2 AMQ28_02385 IPR033128 Adenylosuccinate synthase, active site AMQ28_02385 IPR018220 Adenylosuccinate synthase, GTP-binding site AMQ28_02385 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_02390 IPR004517 ATP phosphoribosyltransferase regulatory subunit AMQ28_02390 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit AMQ28_02390 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain AMQ28_02400 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AMQ28_02400 IPR036291 NAD(P)-binding domain superfamily AMQ28_02400 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AMQ28_02400 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AMQ28_02400 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AMQ28_02400 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AMQ28_02405 IPR003156 DHHA1 domain AMQ28_02405 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria AMQ28_02405 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AMQ28_02405 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal AMQ28_02405 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain AMQ28_02405 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily AMQ28_02405 IPR002318 Alanine-tRNA ligase, class IIc AMQ28_02405 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AMQ28_02405 IPR009000 Translation protein, beta-barrel domain superfamily AMQ28_02410 IPR005260 Aspartate kinase, monofunctional class AMQ28_02410 IPR001341 Aspartate kinase AMQ28_02410 IPR027795 CASTOR, ACT domain AMQ28_02410 IPR018042 Aspartate kinase, conserved site AMQ28_02410 IPR036393 Acetylglutamate kinase-like superfamily AMQ28_02410 IPR002912 ACT domain AMQ28_02410 IPR041740 Aspartokinase catalytic domain AMQ28_02410 IPR001048 Aspartate/glutamate/uridylate kinase AMQ28_02415 IPR003751 Translational regulator CsrA AMQ28_02415 IPR036107 Carbon storage regulator superfamily AMQ28_02420 IPR001352 Ribonuclease HII/HIII AMQ28_02420 IPR022898 Ribonuclease HII AMQ28_02420 IPR012337 Ribonuclease H-like superfamily AMQ28_02420 IPR036397 Ribonuclease H superfamily AMQ28_02420 IPR024567 Ribonuclease HII/HIII domain AMQ28_02430 IPR016174 Di-haem cytochrome, transmembrane AMQ28_02430 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AMQ28_02440 IPR001365 Adenosine/AMP deaminase domain AMQ28_02440 IPR006330 Adenosine/adenine deaminase AMQ28_02440 IPR032466 Metal-dependent hydrolase AMQ28_02440 IPR028892 Adenine deaminase type 2 AMQ28_02445 IPR026033 Azaguanine-like transporters AMQ28_02445 IPR006043 Xanthine/uracil/vitamin C permease AMQ28_02450 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain AMQ28_02450 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily AMQ28_02450 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMQ28_02450 IPR006050 DNA photolyase, N-terminal AMQ28_02450 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_02450 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily AMQ28_02450 IPR002081 Cryptochrome/DNA photolyase class 1 AMQ28_02460 IPR005583 Peroxide stress protein YaaA AMQ28_02475 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AMQ28_02475 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site AMQ28_02475 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase AMQ28_02475 IPR001986 Enolpyruvate transferase domain AMQ28_02475 IPR036968 Enolpyruvate transferase domain superfamily AMQ28_02480 IPR036979 Chorismate mutase domain superfamily AMQ28_02480 IPR036263 Chorismate mutase type II superfamily AMQ28_02480 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase AMQ28_02480 IPR002912 ACT domain AMQ28_02480 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain AMQ28_02480 IPR018528 Prephenate dehydratase, conserved site AMQ28_02480 IPR002701 Chorismate mutase II, prokaryotic-type AMQ28_02480 IPR001086 Prephenate dehydratase AMQ28_02490 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMQ28_02490 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMQ28_02490 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMQ28_02490 IPR006089 Acyl-CoA dehydrogenase, conserved site AMQ28_02490 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMQ28_02490 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMQ28_02490 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMQ28_02495 IPR036458 Sodium:dicarboxylate symporter superfamily AMQ28_02495 IPR018107 Sodium:dicarboxylate symporter, conserved site AMQ28_02495 IPR001991 Sodium:dicarboxylate symporter AMQ28_02495 IPR023954 C4-dicarboxylate transport protein AMQ28_02500 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily AMQ28_02500 IPR017459 Glycosyl transferase family 3, N-terminal domain AMQ28_02500 IPR000312 Glycosyl transferase, family 3 AMQ28_02500 IPR017926 Glutamine amidotransferase AMQ28_02500 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain AMQ28_02500 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily AMQ28_02500 IPR029062 Class I glutamine amidotransferase-like AMQ28_02500 IPR005940 Anthranilate phosphoribosyl transferase AMQ28_02505 IPR009749 Protein of unknown function DUF1315 AMQ28_02510 IPR002504 NAD kinase AMQ28_02510 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal AMQ28_02510 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal AMQ28_02510 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMQ28_02515 IPR011813 Penicillin-binding protein 1B AMQ28_02515 IPR012338 Beta-lactamase/transpeptidase-like AMQ28_02515 IPR028166 Bifunctional transglycosylase second domain AMQ28_02515 IPR001460 Penicillin-binding protein, transpeptidase AMQ28_02515 IPR036950 Penicillin binding protein transglycosylase domain AMQ28_02515 IPR001264 Glycosyl transferase, family 51 AMQ28_02515 IPR023346 Lysozyme-like domain superfamily AMQ28_02525 IPR000086 NUDIX hydrolase domain AMQ28_02525 IPR020084 NUDIX hydrolase, conserved site AMQ28_02525 IPR003561 Mutator MutT AMQ28_02525 IPR015797 NUDIX hydrolase-like domain superfamily AMQ28_02525 IPR020476 NUDIX hydrolase AMQ28_02535 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_02535 IPR013727 Two-component sensor kinase, N-terminal AMQ28_02535 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_02535 IPR005467 Histidine kinase domain AMQ28_02535 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMQ28_02535 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMQ28_02535 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMQ28_02535 IPR003660 HAMP domain AMQ28_02540 IPR001867 OmpR/PhoB-type DNA-binding domain AMQ28_02540 IPR011006 CheY-like superfamily AMQ28_02540 IPR039420 Transcriptional regulatory protein WalR-like AMQ28_02540 IPR001789 Signal transduction response regulator, receiver domain AMQ28_02540 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_02550 IPR013369 Type II secretion system GspE AMQ28_02550 IPR037257 General secretory system II, protein E, N-terminal superfamily AMQ28_02550 IPR001482 Type II/IV secretion system protein AMQ28_02550 IPR003593 AAA+ ATPase domain AMQ28_02550 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_02555 IPR023370 TrmO-like, N-terminal domain AMQ28_02555 IPR041369 TrmO, C-terminal AMQ28_02555 IPR023368 Uncharacterised protein family UPF0066, conserved site AMQ28_02555 IPR040372 YaeB-like AMQ28_02555 IPR036413 YaeB-like superfamily AMQ28_02555 IPR036414 YaeB, N-terminal domain superfamily AMQ28_02560 IPR017938 Riboflavin synthase-like beta-barrel AMQ28_02560 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMQ28_02560 IPR017927 FAD-binding domain, ferredoxin reductase-type AMQ28_02560 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMQ28_02560 IPR033892 Ferredoxin--NADP reductase, bacteria AMQ28_02560 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMQ28_02560 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMQ28_02580 IPR009061 Putative DNA-binding domain superfamily AMQ28_02580 IPR000551 MerR-type HTH domain AMQ28_02585 IPR002109 Glutaredoxin AMQ28_02585 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AMQ28_02585 IPR012336 Thioredoxin-like fold AMQ28_02585 IPR036249 Thioredoxin-like superfamily AMQ28_02585 IPR012081 Alkyl hydroperoxide reductase subunit F AMQ28_02585 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_02585 IPR023753 FAD/NAD(P)-binding domain AMQ28_02595 IPR008863 Toxic anion resistance AMQ28_02605 IPR001991 Sodium:dicarboxylate symporter AMQ28_02605 IPR018107 Sodium:dicarboxylate symporter, conserved site AMQ28_02605 IPR023954 C4-dicarboxylate transport protein AMQ28_02605 IPR036458 Sodium:dicarboxylate symporter superfamily AMQ28_02610 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_02610 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_02610 IPR005119 LysR, substrate-binding AMQ28_02610 IPR000847 Transcription regulator HTH, LysR AMQ28_02615 IPR018951 Fumarase C, C-terminal AMQ28_02615 IPR024083 Fumarase/histidase, N-terminal AMQ28_02615 IPR020557 Fumarate lyase, conserved site AMQ28_02615 IPR022761 Fumarate lyase, N-terminal AMQ28_02615 IPR004708 Aspartate ammonia-lyase AMQ28_02615 IPR008948 L-Aspartase-like AMQ28_02615 IPR000362 Fumarate lyase family AMQ28_02625 IPR038765 Papain-like cysteine peptidase superfamily AMQ28_02625 IPR002931 Transglutaminase-like AMQ28_02625 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal AMQ28_02625 IPR025403 Domain of unknown function DUF4129 AMQ28_02635 IPR011703 ATPase, AAA-3 AMQ28_02635 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_02635 IPR041628 ChlI/MoxR, AAA lid domain AMQ28_02640 IPR007423 Selenoprotein, putative AMQ28_02645 IPR003706 CstA, N-terminal domain AMQ28_02645 IPR025299 CstA, C-terminal domain AMQ28_02650 IPR015365 Elongation factor P, C-terminal AMQ28_02650 IPR012340 Nucleic acid-binding, OB-fold AMQ28_02650 IPR014722 Ribosomal protein L2, domain 2 AMQ28_02650 IPR020599 Translation elongation factor P/YeiP AMQ28_02650 IPR013185 Translation elongation factor, KOW-like AMQ28_02650 IPR001059 Translation elongation factor P/YeiP, central AMQ28_02650 IPR011768 Translation elongation factor P AMQ28_02650 IPR008991 Translation protein SH3-like domain superfamily AMQ28_02655 IPR022462 Lysine-2,3-aminomutase-like AMQ28_02655 IPR007197 Radical SAM AMQ28_02655 IPR013785 Aldolase-type TIM barrel AMQ28_02655 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AMQ28_02670 IPR034704 L28p-like AMQ28_02670 IPR002150 Ribosomal protein L31 AMQ28_02670 IPR042105 Ribosomal protein L31 superfamily AMQ28_02670 IPR027491 Ribosomal protein L31 type A AMQ28_02675 IPR016833 Putative sodium bile acid cotransporter AMQ28_02675 IPR038770 Sodium/solute symporter superfamily AMQ28_02680 IPR037523 Vicinal oxygen chelate (VOC) domain AMQ28_02680 IPR018146 Glyoxalase I, conserved site AMQ28_02680 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMQ28_02680 IPR004361 Glyoxalase I AMQ28_02680 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMQ28_02685 IPR020846 Major facilitator superfamily domain AMQ28_02685 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 AMQ28_02685 IPR011701 Major facilitator superfamily AMQ28_02685 IPR036259 MFS transporter superfamily AMQ28_02690 IPR027065 Lon protease AMQ28_02690 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_02690 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMQ28_02690 IPR041699 Lon protease, AAA domain AMQ28_02690 IPR008269 Peptidase S16, Lon proteolytic domain AMQ28_02695 IPR014434 Monothiol glutaredoxin AMQ28_02695 IPR033658 Glutaredoxin, PICOT-like AMQ28_02695 IPR002109 Glutaredoxin AMQ28_02695 IPR036249 Thioredoxin-like superfamily AMQ28_02695 IPR004480 Monothiol glutaredoxin-related AMQ28_02700 IPR005814 Aminotransferase class-III AMQ28_02700 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_02700 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_02700 IPR004636 Acetylornithine/Succinylornithine transaminase family AMQ28_02700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_02705 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_02705 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_02705 IPR005119 LysR, substrate-binding AMQ28_02705 IPR000847 Transcription regulator HTH, LysR AMQ28_02710 IPR018392 LysM domain AMQ28_02710 IPR011055 Duplicated hybrid motif AMQ28_02710 IPR036779 LysM domain superfamily AMQ28_02710 IPR016047 Peptidase M23 AMQ28_02715 IPR036523 SurE-like phosphatase/nucleotidase superfamily AMQ28_02715 IPR002828 Survival protein SurE-like phosphatase/nucleotidase AMQ28_02715 IPR030048 Survival protein SurE AMQ28_02730 IPR012338 Beta-lactamase/transpeptidase-like AMQ28_02730 IPR015956 Penicillin-binding protein, C-terminal domain superfamily AMQ28_02730 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AMQ28_02730 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal AMQ28_02730 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily AMQ28_02730 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AMQ28_02735 IPR011004 Trimeric LpxA-like superfamily AMQ28_02735 IPR001451 Hexapeptide repeat AMQ28_02740 IPR015797 NUDIX hydrolase-like domain superfamily AMQ28_02740 IPR020084 NUDIX hydrolase, conserved site AMQ28_02740 IPR000086 NUDIX hydrolase domain AMQ28_02740 IPR033713 Phosphatase NudJ AMQ28_02740 IPR020476 NUDIX hydrolase AMQ28_02745 IPR023382 Adenine nucleotide alpha hydrolase-like domains AMQ28_02745 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_02745 IPR004506 tRNA-specific 2-thiouridylase AMQ28_02750 IPR035932 HflD-like superfamily AMQ28_02750 IPR007451 High frequency lysogenization protein HflD AMQ28_02755 IPR022761 Fumarate lyase, N-terminal AMQ28_02755 IPR000362 Fumarate lyase family AMQ28_02755 IPR020557 Fumarate lyase, conserved site AMQ28_02755 IPR008948 L-Aspartase-like AMQ28_02755 IPR004769 Adenylosuccinate lyase AMQ28_02755 IPR024083 Fumarase/histidase, N-terminal AMQ28_02755 IPR013539 Adenylosuccinate lyase PurB, C-terminal AMQ28_02770 IPR013703 Peptidase S49, N-terminal proteobacteria AMQ28_02770 IPR002142 Peptidase S49 AMQ28_02770 IPR029045 ClpP/crotonase-like domain superfamily AMQ28_02775 IPR017871 ABC transporter, conserved site AMQ28_02775 IPR003593 AAA+ ATPase domain AMQ28_02775 IPR003439 ABC transporter-like AMQ28_02775 IPR005670 Phosphate transport system permease protein 1 AMQ28_02775 IPR015850 ABC transporter, phosphate import, PstB AMQ28_02775 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_02780 IPR035906 MetI-like superfamily AMQ28_02780 IPR005672 Phosphate transport system permease protein PstA AMQ28_02780 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMQ28_02785 IPR011864 Phosphate ABC transporter, permease protein PstC AMQ28_02785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMQ28_02785 IPR035906 MetI-like superfamily AMQ28_02790 IPR024370 PBP domain AMQ28_02790 IPR011862 Phosphate binding protein AMQ28_02795 IPR011701 Major facilitator superfamily AMQ28_02795 IPR020846 Major facilitator superfamily domain AMQ28_02795 IPR036259 MFS transporter superfamily AMQ28_02800 IPR002129 Pyridoxal phosphate-dependent decarboxylase AMQ28_02800 IPR021115 Pyridoxal-phosphate binding site AMQ28_02800 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_02800 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_02805 IPR004637 2,4-diaminobutyrate 4-transaminase AMQ28_02805 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_02805 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_02805 IPR005814 Aminotransferase class-III AMQ28_02805 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_02815 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMQ28_02815 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMQ28_02815 IPR033879 Undecaprenyl-diphosphatase AMQ28_02820 IPR011529 Glutamate 5-kinase AMQ28_02820 IPR001057 Glutamate/acetylglutamate kinase AMQ28_02820 IPR019797 Glutamate 5-kinase, conserved site AMQ28_02820 IPR041739 Glutamate-5-kinase domain AMQ28_02820 IPR001048 Aspartate/glutamate/uridylate kinase AMQ28_02820 IPR036393 Acetylglutamate kinase-like superfamily AMQ28_02820 IPR036974 PUA domain superfamily AMQ28_02820 IPR002478 PUA domain AMQ28_02820 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase AMQ28_02820 IPR015947 PUA-like superfamily AMQ28_02825 IPR006074 GTP1/OBG, conserved site AMQ28_02825 IPR035101 GTP-binding protein, Obg-type AMQ28_02825 IPR014100 GTP-binding protein Obg/CgtA AMQ28_02825 IPR036726 GTP1/OBG domain superfamily AMQ28_02825 IPR031167 OBG-type guanine nucleotide-binding (G) domain AMQ28_02825 IPR006073 GTP binding domain AMQ28_02825 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_02825 IPR006169 GTP1/OBG domain AMQ28_02830 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_02830 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_02830 IPR002577 Helix-turn-helix, HxlR type AMQ28_02835 IPR008030 NmrA-like domain AMQ28_02835 IPR036291 NAD(P)-binding domain superfamily AMQ28_02850 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AMQ28_02850 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AMQ28_02850 IPR036291 NAD(P)-binding domain superfamily AMQ28_02850 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AMQ28_02850 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AMQ28_02850 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AMQ28_02855 IPR004626 RarD protein AMQ28_02855 IPR000620 EamA domain AMQ28_02865 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMQ28_02865 IPR001650 Helicase, C-terminal AMQ28_02865 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_02865 IPR001943 UVR domain AMQ28_02865 IPR006935 Helicase/UvrB, N-terminal AMQ28_02865 IPR036876 UVR domain superfamily AMQ28_02865 IPR004807 UvrABC system, subunit B AMQ28_02865 IPR041471 UvrB, interaction domain AMQ28_02865 IPR024759 UvrB, YAD/RRR-motif-containing domain AMQ28_02895 IPR042098 Taurine dioxygenase TauD-like superfamily AMQ28_02895 IPR003819 TauD/TfdA-like domain AMQ28_02900 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMQ28_02900 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMQ28_02900 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AMQ28_02900 IPR022962 Soluble pyridine nucleotide transhydrogenase AMQ28_02900 IPR023753 FAD/NAD(P)-binding domain AMQ28_02900 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_02905 IPR007197 Radical SAM AMQ28_02905 IPR003698 Lipoyl synthase AMQ28_02905 IPR006638 Elp3/MiaB/NifB AMQ28_02905 IPR013785 Aldolase-type TIM barrel AMQ28_02910 IPR009078 Ferritin-like superfamily AMQ28_02910 IPR012347 Ferritin-like AMQ28_02910 IPR010386 tRNA-hydroxylase MiaE AMQ28_02915 IPR013785 Aldolase-type TIM barrel AMQ28_02915 IPR036130 Pyridoxine 5'-phosphate synthase AMQ28_02915 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ AMQ28_02920 IPR022572 DNA replication/recombination mediator RecO, N-terminal AMQ28_02920 IPR012340 Nucleic acid-binding, OB-fold AMQ28_02920 IPR003717 Recombination protein O, RecO AMQ28_02920 IPR037278 ARFGAP/RecO-like zinc finger AMQ28_02930 IPR005662 GTP-binding protein Era AMQ28_02930 IPR006073 GTP binding domain AMQ28_02930 IPR015946 K homology domain-like, alpha/beta AMQ28_02930 IPR009019 K homology domain superfamily, prokaryotic type AMQ28_02930 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_02930 IPR030388 Era-type guanine nucleotide-binding (G) domain AMQ28_02930 IPR005225 Small GTP-binding protein domain AMQ28_02930 IPR004044 K Homology domain, type 2 AMQ28_02935 IPR014720 Double-stranded RNA-binding domain AMQ28_02935 IPR011907 Ribonuclease III AMQ28_02935 IPR000999 Ribonuclease III domain AMQ28_02935 IPR036389 Ribonuclease III, endonuclease domain superfamily AMQ28_02945 IPR019533 Peptidase S26 AMQ28_02945 IPR036286 LexA/Signal peptidase-like superfamily AMQ28_02945 IPR000223 Peptidase S26A, signal peptidase I AMQ28_02945 IPR019757 Peptidase S26A, signal peptidase I, lysine active site AMQ28_02945 IPR019758 Peptidase S26A, signal peptidase I, conserved site AMQ28_02945 IPR019756 Peptidase S26A, signal peptidase I, serine active site AMQ28_02950 IPR000640 Elongation factor EFG, domain V-like AMQ28_02950 IPR013842 GTP-binding protein LepA, C-terminal AMQ28_02950 IPR035654 Elongation factor 4, domain IV AMQ28_02950 IPR006297 Elongation factor 4 AMQ28_02950 IPR004161 Translation elongation factor EFTu-like, domain 2 AMQ28_02950 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_02950 IPR005225 Small GTP-binding protein domain AMQ28_02950 IPR000795 Transcription factor, GTP-binding domain AMQ28_02950 IPR035647 EF-G domain III/V-like AMQ28_02950 IPR038363 LepA, C-terminal domain superfamily AMQ28_02950 IPR031157 Tr-type G domain, conserved site AMQ28_02960 IPR001940 Peptidase S1C AMQ28_02960 IPR009003 Peptidase S1, PA clan AMQ28_02960 IPR011782 Peptidase S1C, Do AMQ28_02960 IPR036034 PDZ superfamily AMQ28_02960 IPR001478 PDZ domain AMQ28_02965 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AMQ28_02965 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AMQ28_02965 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AMQ28_02965 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_02965 IPR005288 L-aspartate oxidase AMQ28_02965 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMQ28_02975 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_02975 IPR018094 Thymidylate kinase AMQ28_02975 IPR039430 Thymidylate kinase-like domain AMQ28_02980 IPR003770 Endolytic murein transglycosylase AMQ28_02990 IPR005669 Thiosulphate/Sulfate-binding protein AMQ28_02990 IPR034408 Sulphate/thiosulphate-binding site AMQ28_02990 IPR000957 Sulphate/thiosulphate-binding, conserved site AMQ28_03000 IPR005667 Sulphate ABC transporter permease protein 2 AMQ28_03000 IPR035906 MetI-like superfamily AMQ28_03000 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMQ28_03000 IPR011865 Sulphate ABC transporter, permease protein CysT AMQ28_03005 IPR035906 MetI-like superfamily AMQ28_03005 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMQ28_03005 IPR011866 Sulphate ABC transporter, permease protein CysW AMQ28_03005 IPR005667 Sulphate ABC transporter permease protein 2 AMQ28_03010 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal AMQ28_03010 IPR003593 AAA+ ATPase domain AMQ28_03010 IPR024765 TOBE-like domain AMQ28_03010 IPR017871 ABC transporter, conserved site AMQ28_03010 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_03010 IPR003439 ABC transporter-like AMQ28_03010 IPR005666 Sulphate transport system permease protein 1 AMQ28_03010 IPR008995 Molybdate/tungstate binding, C-terminal AMQ28_03015 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain AMQ28_03015 IPR005119 LysR, substrate-binding AMQ28_03015 IPR000847 Transcription regulator HTH, LysR AMQ28_03015 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_03015 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_03025 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 AMQ28_03025 IPR018357 Hexapeptide transferase, conserved site AMQ28_03025 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family AMQ28_03025 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily AMQ28_03025 IPR001451 Hexapeptide repeat AMQ28_03025 IPR011004 Trimeric LpxA-like superfamily AMQ28_03030 IPR007197 Radical SAM AMQ28_03030 IPR013785 Aldolase-type TIM barrel AMQ28_03030 IPR024924 7-carboxy-7-deazaguanine synthase-like AMQ28_03035 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_03035 IPR018317 Queuosine biosynthesis protein QueC AMQ28_03050 IPR013766 Thioredoxin domain AMQ28_03050 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AMQ28_03050 IPR036249 Thioredoxin-like superfamily AMQ28_03055 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMQ28_03055 IPR023480 Uncharacterised protein family UPF0312/YceI AMQ28_03055 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMQ28_03060 IPR004821 Cytidyltransferase-like domain AMQ28_03060 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain AMQ28_03060 IPR015797 NUDIX hydrolase-like domain superfamily AMQ28_03060 IPR020084 NUDIX hydrolase, conserved site AMQ28_03060 IPR000086 NUDIX hydrolase domain AMQ28_03060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_03065 IPR029045 ClpP/crotonase-like domain superfamily AMQ28_03065 IPR001753 Enoyl-CoA hydratase/isomerase AMQ28_03070 IPR029479 Nitroreductase AMQ28_03070 IPR000415 Nitroreductase-like AMQ28_03075 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria AMQ28_03075 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AMQ28_03075 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMQ28_03075 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMQ28_03080 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMQ28_03080 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMQ28_03080 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMQ28_03080 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMQ28_03080 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMQ28_03080 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMQ28_03080 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type AMQ28_03085 IPR029062 Class I glutamine amidotransferase-like AMQ28_03085 IPR036676 PurM-like, C-terminal domain superfamily AMQ28_03085 IPR010918 PurM-like, C-terminal domain AMQ28_03085 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain AMQ28_03085 IPR010073 Phosphoribosylformylglycinamidine synthase PurL AMQ28_03085 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal AMQ28_03085 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily AMQ28_03085 IPR036921 PurM-like, N-terminal domain superfamily AMQ28_03085 IPR017926 Glutamine amidotransferase AMQ28_03095 IPR003607 HD/PDEase domain AMQ28_03095 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily AMQ28_03095 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal AMQ28_03095 IPR006674 HD domain AMQ28_03095 IPR023024 dNTP triphosphohydrolase, type 3 AMQ28_03095 IPR006261 dNTP triphosphohydrolase AMQ28_03100 IPR011114 Holliday junction DNA helicase RuvA, C-terminal AMQ28_03100 IPR012340 Nucleic acid-binding, OB-fold AMQ28_03100 IPR000085 Bacterial DNA recombination protein RuvA AMQ28_03100 IPR010994 RuvA domain 2-like AMQ28_03100 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial AMQ28_03100 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AMQ28_03100 IPR036267 RuvA, C-terminal domain superfamily AMQ28_03105 IPR008823 RuvB C-terminal winged helix domain AMQ28_03105 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_03105 IPR003593 AAA+ ATPase domain AMQ28_03105 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_03105 IPR041445 RuvB, AAA lid domain AMQ28_03105 IPR008824 RuvB-like P-loop domain AMQ28_03105 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_03105 IPR004605 DNA helicase, Holliday junction RuvB-type AMQ28_03120 IPR029069 HotDog domain superfamily AMQ28_03120 IPR006683 Thioesterase domain AMQ28_03120 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase AMQ28_03120 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family AMQ28_03120 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site AMQ28_03125 IPR002898 MotA/TolQ/ExbB proton channel AMQ28_03125 IPR014163 Tol-Pal system, TolQ AMQ28_03130 IPR003400 Biopolymer transport protein ExbD/TolR AMQ28_03130 IPR014168 Tol-Pal system protein TolR AMQ28_03140 IPR036752 TolB, N-terminal domain superfamily AMQ28_03140 IPR007195 TolB, N-terminal AMQ28_03140 IPR014167 Tol-Pal system protein TolB AMQ28_03140 IPR011659 WD40-like Beta Propeller AMQ28_03140 IPR011042 Six-bladed beta-propeller, TolB-like AMQ28_03145 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal AMQ28_03145 IPR006664 Outer membrane protein, bacterial AMQ28_03145 IPR006665 OmpA-like domain AMQ28_03145 IPR039001 Peptidoglycan-associated lipoprotein AMQ28_03145 IPR036737 OmpA-like domain superfamily AMQ28_03145 IPR006690 Outer membrane protein, OmpA-like, conserved site AMQ28_03155 IPR000146 Fructose-1,6-bisphosphatase class 1 AMQ28_03155 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal AMQ28_03155 IPR028343 Fructose-1,6-bisphosphatase AMQ28_03160 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMQ28_03160 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AMQ28_03160 IPR029028 Alpha/beta knot methyltransferases AMQ28_03160 IPR029064 50S ribosomal protein L30e-like AMQ28_03160 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMQ28_03190 IPR013317 Chromosomal replication initiator protein DnaA AMQ28_03190 IPR018312 Chromosomal replication control, initiator DnaA, conserved site AMQ28_03190 IPR038454 DnaA, N-terminal domain superfamily AMQ28_03190 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_03190 IPR020591 Chromosomal replication control, initiator DnaA-like AMQ28_03190 IPR001957 Chromosomal replication control, initiator DnaA AMQ28_03190 IPR003593 AAA+ ATPase domain AMQ28_03190 IPR010921 Trp repressor/replication initiator AMQ28_03190 IPR024633 DnaA N-terminal domain AMQ28_03190 IPR013159 Chromosomal replication initiator, DnaA C-terminal AMQ28_03195 IPR002549 Transmembrane protein TqsA-like AMQ28_03200 IPR010918 PurM-like, C-terminal domain AMQ28_03200 IPR036921 PurM-like, N-terminal domain superfamily AMQ28_03200 IPR016188 PurM-like, N-terminal domain AMQ28_03200 IPR036676 PurM-like, C-terminal domain superfamily AMQ28_03200 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase AMQ28_03205 IPR036477 Formyl transferase, N-terminal domain superfamily AMQ28_03205 IPR001555 Phosphoribosylglycinamide formyltransferase, active site AMQ28_03205 IPR004607 Phosphoribosylglycinamide formyltransferase AMQ28_03205 IPR002376 Formyl transferase, N-terminal AMQ28_03215 IPR002142 Peptidase S49 AMQ28_03215 IPR029045 ClpP/crotonase-like domain superfamily AMQ28_03215 IPR004670 Na+/H+ antiporter NhaA AMQ28_03215 IPR023171 Na/H antiporter domain superfamily AMQ28_03225 IPR035681 ComA-like, MBL domain AMQ28_03225 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMQ28_03225 IPR001279 Metallo-beta-lactamase AMQ28_03225 IPR025405 Domain of unknown function DUF4131 AMQ28_03225 IPR004477 ComEC/Rec2-related protein AMQ28_03225 IPR004797 Competence protein ComEC/Rec2 AMQ28_03230 IPR017871 ABC transporter, conserved site AMQ28_03230 IPR015854 ABC transporter, lipoprotein release, LolD AMQ28_03230 IPR003439 ABC transporter-like AMQ28_03230 IPR003593 AAA+ ATPase domain AMQ28_03230 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_03235 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E AMQ28_03235 IPR025857 MacB-like periplasmic core domain AMQ28_03235 IPR003838 ABC transporter permease protein domain AMQ28_03245 IPR000620 EamA domain AMQ28_03250 IPR003791 Protein of unknown function UPF0178 AMQ28_03260 IPR022278 Phosphoserine aminotransferase AMQ28_03260 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMQ28_03260 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_03260 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_03260 IPR000192 Aminotransferase class V domain AMQ28_03260 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_03270 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMQ28_03285 IPR034703 Proton/glutamate-aspartate symporter GltP AMQ28_03285 IPR036458 Sodium:dicarboxylate symporter superfamily AMQ28_03285 IPR033380 Glutamate-aspartate symport protein GltP/GltT AMQ28_03285 IPR001991 Sodium:dicarboxylate symporter AMQ28_03285 IPR018107 Sodium:dicarboxylate symporter, conserved site AMQ28_03290 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily AMQ28_03290 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AMQ28_03290 IPR005743 DNA gyrase, subunit A AMQ28_03290 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AMQ28_03290 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AMQ28_03290 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMQ28_03290 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat AMQ28_03295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_03295 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site AMQ28_03295 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal AMQ28_03295 IPR001308 Electron transfer flavoprotein alpha subunit/FixB AMQ28_03295 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AMQ28_03295 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMQ28_03295 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AMQ28_03300 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AMQ28_03300 IPR012255 Electron transfer flavoprotein, beta subunit AMQ28_03300 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal AMQ28_03300 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_03300 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site AMQ28_03305 IPR001123 Amino acid exporter protein, LeuE-type AMQ28_03305 IPR004778 Homoserine/Threonine efflux protein AMQ28_03310 IPR027805 Transposase, Helix-turn-helix domain AMQ28_03310 IPR027806 Harbinger transposase-derived nuclease domain AMQ28_03320 IPR019888 Transcription regulator AsnC-type AMQ28_03320 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMQ28_03320 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMQ28_03320 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_03320 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_03320 IPR000485 AsnC-type HTH domain AMQ28_03320 IPR011008 Dimeric alpha-beta barrel AMQ28_03330 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMQ28_03330 IPR023009 Tyrosine recombinase XerC/XerD AMQ28_03330 IPR011931 Tyrosine recombinase XerC AMQ28_03330 IPR004107 Integrase, SAM-like, N-terminal AMQ28_03330 IPR010998 Integrase/recombinase, N-terminal AMQ28_03330 IPR002104 Integrase, catalytic domain AMQ28_03330 IPR013762 Integrase-like, catalytic domain superfamily AMQ28_03340 IPR001653 Diaminopimelate epimerase, DapF AMQ28_03340 IPR018510 Diaminopimelate epimerase, active site AMQ28_03345 IPR029066 PLP-binding barrel AMQ28_03345 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AMQ28_03345 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AMQ28_03345 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AMQ28_03345 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AMQ28_03345 IPR000183 Ornithine/DAP/Arg decarboxylase AMQ28_03345 IPR002986 Diaminopimelate decarboxylase, LysA AMQ28_03345 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AMQ28_03355 IPR004840 Amino acid permease, conserved site AMQ28_03355 IPR004841 Amino acid permease/ SLC12A domain AMQ28_03360 IPR003593 AAA+ ATPase domain AMQ28_03360 IPR041166 LapB, rubredoxin metal binding domain AMQ28_03360 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMQ28_03360 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_03360 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain AMQ28_03360 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_03360 IPR004504 DNA repair protein RadA AMQ28_03405 IPR042172 Adenosylhomocysteinase-like superfamily AMQ28_03405 IPR000043 Adenosylhomocysteinase-like AMQ28_03405 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMQ28_03405 IPR036291 NAD(P)-binding domain superfamily AMQ28_03405 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site AMQ28_03410 IPR029041 FAD-linked oxidoreductase-like AMQ28_03410 IPR003171 Methylenetetrahydrofolate reductase AMQ28_03410 IPR004620 5,10-methylenetetrahydrofolate reductase AMQ28_03415 IPR029028 Alpha/beta knot methyltransferases AMQ28_03415 IPR015947 PUA-like superfamily AMQ28_03415 IPR006700 Ribosomal RNA small subunit methyltransferase E AMQ28_03415 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMQ28_03420 IPR029787 Nucleotide cyclase AMQ28_03420 IPR000253 Forkhead-associated (FHA) domain AMQ28_03420 IPR001633 EAL domain AMQ28_03420 IPR035919 EAL domain superfamily AMQ28_03420 IPR008984 SMAD/FHA domain superfamily AMQ28_03420 IPR000160 GGDEF domain AMQ28_03425 IPR015884 Malic enzyme, conserved site AMQ28_03425 IPR012301 Malic enzyme, N-terminal domain AMQ28_03425 IPR002505 Phosphate acetyl/butaryl transferase AMQ28_03425 IPR042112 Phosphate acetyltransferase, domain 2 AMQ28_03425 IPR042113 Phosphate acetyltransferase, domain 1 AMQ28_03425 IPR036291 NAD(P)-binding domain superfamily AMQ28_03425 IPR012188 NAD(P)-dependent malic enzyme AMQ28_03425 IPR012302 Malic enzyme, NAD-binding AMQ28_03425 IPR037062 Malic enzyme, N-terminal domain superfamily AMQ28_03430 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AMQ28_03430 IPR002646 Poly A polymerase, head domain AMQ28_03430 IPR012006 tRNA nucleotidyltransferase, proteobacteria AMQ28_03430 IPR003607 HD/PDEase domain AMQ28_03435 IPR004525 Elongation factor P--(R)-beta-lysine ligase AMQ28_03435 IPR006195 Aminoacyl-tRNA synthetase, class II AMQ28_03435 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AMQ28_03435 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal AMQ28_03440 IPR038251 PdxB, dimerisation domain superfamily AMQ28_03440 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMQ28_03440 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMQ28_03440 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMQ28_03440 IPR020921 Erythronate-4-phosphate dehydrogenase AMQ28_03440 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain AMQ28_03440 IPR036291 NAD(P)-binding domain superfamily AMQ28_03445 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMQ28_03445 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMQ28_03445 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMQ28_03445 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMQ28_03445 IPR006089 Acyl-CoA dehydrogenase, conserved site AMQ28_03445 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMQ28_03445 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMQ28_03450 IPR000847 Transcription regulator HTH, LysR AMQ28_03450 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_03450 IPR005119 LysR, substrate-binding AMQ28_03450 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_03450 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria AMQ28_03450 IPR017685 HTH-type transcriptional regulator ArgP AMQ28_03455 IPR036291 NAD(P)-binding domain superfamily AMQ28_03455 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMQ28_03455 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_03470 IPR015852 ABC transporter, molybdenum import, ModC AMQ28_03470 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_03470 IPR011868 Molybdate ABC transporter, ATP-binding protein AMQ28_03470 IPR008995 Molybdate/tungstate binding, C-terminal AMQ28_03470 IPR004606 Molybdenum-pterin binding AMQ28_03470 IPR005116 Transport-associated OB, type 1 AMQ28_03470 IPR003439 ABC transporter-like AMQ28_03470 IPR017871 ABC transporter, conserved site AMQ28_03470 IPR003593 AAA+ ATPase domain AMQ28_03475 IPR011867 Molybdate ABC transporter, permease protein AMQ28_03475 IPR035906 MetI-like superfamily AMQ28_03475 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMQ28_03480 IPR005950 Molybdate ABC transporter, substrate-binding protein AMQ28_03485 IPR036135 MoeA, N-terminal and linker domain superfamily AMQ28_03485 IPR036425 MoaB/Mog-like domain superfamily AMQ28_03485 IPR001453 MoaB/Mog domain AMQ28_03485 IPR005110 MoeA, N-terminal and linker domain AMQ28_03485 IPR005111 MoeA, C-terminal, domain IV AMQ28_03485 IPR036688 MoeA, C-terminal, domain IV superfamily AMQ28_03485 IPR038987 Molybdopterin biosynthesis protein MoeA-like AMQ28_03490 IPR023045 Molybdenum cofactor biosynthesis C AMQ28_03490 IPR036425 MoaB/Mog-like domain superfamily AMQ28_03490 IPR001453 MoaB/Mog domain AMQ28_03490 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily AMQ28_03490 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain AMQ28_03490 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA AMQ28_03500 IPR003448 Molybdopterin biosynthesis MoaE AMQ28_03500 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily AMQ28_03510 IPR007197 Radical SAM AMQ28_03510 IPR010505 Molybdenum cofactor synthesis C-terminal AMQ28_03510 IPR013785 Aldolase-type TIM barrel AMQ28_03510 IPR013483 Molybdenum cofactor biosynthesis protein A AMQ28_03510 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AMQ28_03510 IPR006638 Elp3/MiaB/NifB AMQ28_03515 IPR029044 Nucleotide-diphospho-sugar transferases AMQ28_03515 IPR013482 Molybdenum cofactor guanylyltransferase AMQ28_03515 IPR025877 MobA-like NTP transferase AMQ28_03520 IPR003786 Sulfur carrier protein FdhD AMQ28_03520 IPR016193 Cytidine deaminase-like AMQ28_03525 IPR010046 Oxidoreductase alpha (molybdopterin) subunit AMQ28_03525 IPR009010 Aspartate decarboxylase-like domain superfamily AMQ28_03525 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain AMQ28_03525 IPR006656 Molybdopterin oxidoreductase AMQ28_03525 IPR037951 YdeP-like, MopB domain AMQ28_03530 IPR011294 3-hydroxybutyrate dehydrogenase AMQ28_03530 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_03530 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMQ28_03530 IPR036291 NAD(P)-binding domain superfamily AMQ28_03535 IPR003474 Gluconate transporter AMQ28_03545 IPR005119 LysR, substrate-binding AMQ28_03545 IPR000847 Transcription regulator HTH, LysR AMQ28_03545 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_03545 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_03550 IPR000847 Transcription regulator HTH, LysR AMQ28_03550 IPR011781 D-serine deaminase transcriptional activator AMQ28_03550 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_03550 IPR005119 LysR, substrate-binding AMQ28_03550 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_03555 IPR003474 Gluconate transporter AMQ28_03560 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMQ28_03560 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AMQ28_03560 IPR001926 Pyridoxal-phosphate dependent enzyme AMQ28_03560 IPR011780 D-serine ammonia-lyase AMQ28_03565 IPR002577 Helix-turn-helix, HxlR type AMQ28_03565 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_03565 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_03565 IPR011991 ArsR-like helix-turn-helix domain AMQ28_03570 IPR024473 Transposase, IS4, N-terminal AMQ28_03570 IPR002559 Transposase, IS4-like AMQ28_03570 IPR012337 Ribonuclease H-like superfamily AMQ28_03575 IPR013785 Aldolase-type TIM barrel AMQ28_03575 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_03575 IPR023753 FAD/NAD(P)-binding domain AMQ28_03575 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AMQ28_03585 IPR000639 Epoxide hydrolase-like AMQ28_03585 IPR000073 Alpha/beta hydrolase fold-1 AMQ28_03585 IPR029058 Alpha/Beta hydrolase fold AMQ28_03590 IPR005944 Proline iminopeptidase AMQ28_03590 IPR002410 Peptidase S33 AMQ28_03590 IPR000073 Alpha/beta hydrolase fold-1 AMQ28_03590 IPR029058 Alpha/Beta hydrolase fold AMQ28_03595 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_03595 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMQ28_03595 IPR036291 NAD(P)-binding domain superfamily AMQ28_03600 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMQ28_03600 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMQ28_03600 IPR020807 Polyketide synthase, dehydratase domain AMQ28_03600 IPR042104 Polyketide synthase, dehydratase domain superfamily AMQ28_03600 IPR032821 Ketoacyl-synthetase, C-terminal extension AMQ28_03600 IPR036291 NAD(P)-binding domain superfamily AMQ28_03600 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMQ28_03600 IPR036299 Polyketide synthase, docking domain superfmaily AMQ28_03600 IPR020843 Polyketide synthase, enoylreductase domain AMQ28_03600 IPR018201 Beta-ketoacyl synthase, active site AMQ28_03600 IPR013154 Alcohol dehydrogenase, N-terminal AMQ28_03600 IPR013968 Polyketide synthase, ketoreductase domain AMQ28_03600 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMQ28_03600 IPR014043 Acyl transferase AMQ28_03600 IPR036736 ACP-like superfamily AMQ28_03600 IPR001227 Acyl transferase domain superfamily AMQ28_03600 IPR009081 Phosphopantetheine binding ACP domain AMQ28_03600 IPR014030 Beta-ketoacyl synthase, N-terminal AMQ28_03600 IPR014031 Beta-ketoacyl synthase, C-terminal AMQ28_03600 IPR011032 GroES-like superfamily AMQ28_03600 IPR006162 Phosphopantetheine attachment site AMQ28_03600 IPR016039 Thiolase-like AMQ28_03610 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily AMQ28_03610 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AMQ28_03610 IPR028624 Transcription elongation factor GreA/GreB AMQ28_03610 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AMQ28_03610 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AMQ28_03610 IPR023459 Transcription elongation factor GreA/GreB family AMQ28_03610 IPR006358 Transcription elongation factor GreB AMQ28_03610 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily AMQ28_03615 IPR008258 Transglycosylase SLT domain 1 AMQ28_03615 IPR000189 Prokaryotic transglycosylase, active site AMQ28_03615 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMQ28_03615 IPR023346 Lysozyme-like domain superfamily AMQ28_03615 IPR023703 Membrane-bound lytic murein transglycosylase F AMQ28_03625 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase AMQ28_03625 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AMQ28_03625 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_03625 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type AMQ28_03630 IPR000189 Prokaryotic transglycosylase, active site AMQ28_03630 IPR010090 Phage tail tape measure protein AMQ28_03630 IPR016047 Peptidase M23 AMQ28_03630 IPR023346 Lysozyme-like domain superfamily AMQ28_03630 IPR008258 Transglycosylase SLT domain 1 AMQ28_03630 IPR011055 Duplicated hybrid motif AMQ28_03635 IPR022919 Peptidase M48, protease HtpX, putative AMQ28_03635 IPR001915 Peptidase M48 AMQ28_03650 IPR006668 Magnesium transporter, MgtE intracellular domain AMQ28_03650 IPR038048 Magnesium transporter MgtE, transmembrane domain AMQ28_03650 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily AMQ28_03650 IPR006667 SLC41 divalent cation transporters, integral membrane domain AMQ28_03650 IPR006669 Magnesium transporter MgtE AMQ28_03650 IPR038076 MgtE, N-terminal domain superfamily AMQ28_03650 IPR000644 CBS domain AMQ28_03655 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMQ28_03655 IPR001036 Acriflavin resistance protein AMQ28_03655 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AMQ28_03660 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily AMQ28_03660 IPR030395 Glycerophosphodiester phosphodiesterase domain AMQ28_03665 IPR040442 Pyruvate kinase-like domain superfamily AMQ28_03665 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMQ28_03665 IPR006254 Isocitrate lyase AMQ28_03665 IPR039556 ICL/PEPM domain AMQ28_03670 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_03670 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_03670 IPR005119 LysR, substrate-binding AMQ28_03670 IPR000847 Transcription regulator HTH, LysR AMQ28_03675 IPR016169 FAD-binding, type PCMH, subdomain 2 AMQ28_03675 IPR036318 FAD-binding, type PCMH-like superfamily AMQ28_03675 IPR002550 CNNM, transmembrane domain AMQ28_03675 IPR000644 CBS domain AMQ28_03675 IPR005170 Transporter-associated domain AMQ28_03680 IPR004680 Citrate transporter-like domain AMQ28_03680 IPR014738 Citrate transporter AMQ28_03695 IPR018946 Alkaline phosphatase D-related AMQ28_03695 IPR038607 PhoD-like superfamily AMQ28_03695 IPR032093 Phospholipase D, N-terminal AMQ28_03695 IPR008963 Purple acid phosphatase-like, N-terminal AMQ28_03695 IPR006311 Twin-arginine translocation pathway, signal sequence AMQ28_03710 IPR006390 Dihydropteroate synthase AMQ28_03710 IPR000489 Pterin-binding domain AMQ28_03710 IPR011005 Dihydropteroate synthase-like AMQ28_03715 IPR003960 ATPase, AAA-type, conserved site AMQ28_03715 IPR003593 AAA+ ATPase domain AMQ28_03715 IPR041569 AAA ATPase, AAA+ lid domain AMQ28_03715 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_03715 IPR011546 Peptidase M41, FtsH extracellular AMQ28_03715 IPR000642 Peptidase M41 AMQ28_03715 IPR037219 Peptidase M41-like AMQ28_03715 IPR003959 ATPase, AAA-type, core AMQ28_03715 IPR005936 Peptidase, FtsH AMQ28_03720 IPR015507 Ribosomal RNA large subunit methyltransferase E AMQ28_03720 IPR002877 Ribosomal RNA methyltransferase FtsJ domain AMQ28_03720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_03725 IPR035920 YhbY-like superfamily AMQ28_03725 IPR001890 RNA-binding, CRM domain AMQ28_03725 IPR017924 RNA-binding protein YhbY AMQ28_03740 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily AMQ28_03740 IPR006274 Carbamoyl-phosphate synthase, small subunit AMQ28_03740 IPR017926 Glutamine amidotransferase AMQ28_03740 IPR029062 Class I glutamine amidotransferase-like AMQ28_03740 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain AMQ28_03740 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain AMQ28_03745 IPR006275 Carbamoyl-phosphate synthase, large subunit AMQ28_03745 IPR036914 Methylglyoxal synthase-like domain superfamily AMQ28_03745 IPR011607 Methylglyoxal synthase-like domain AMQ28_03745 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain AMQ28_03745 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMQ28_03745 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily AMQ28_03745 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain AMQ28_03745 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain AMQ28_03745 IPR016185 Pre-ATP-grasp domain superfamily AMQ28_03745 IPR011761 ATP-grasp fold AMQ28_03750 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily AMQ28_03750 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AMQ28_03750 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AMQ28_03750 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AMQ28_03750 IPR006359 Transcription elongation factor GreA AMQ28_03750 IPR028624 Transcription elongation factor GreA/GreB AMQ28_03750 IPR023459 Transcription elongation factor GreA/GreB family AMQ28_03750 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily AMQ28_03760 IPR018357 Hexapeptide transferase, conserved site AMQ28_03760 IPR011004 Trimeric LpxA-like superfamily AMQ28_03760 IPR001451 Hexapeptide repeat AMQ28_03770 IPR006015 Universal stress protein A family AMQ28_03770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_03770 IPR006016 UspA AMQ28_03775 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain AMQ28_03775 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_03775 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AMQ28_03780 IPR006153 Cation/H+ exchanger AMQ28_03780 IPR018422 Cation/H+ exchanger, CPA1 family AMQ28_03780 IPR038770 Sodium/solute symporter superfamily AMQ28_03790 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AMQ28_03795 IPR008526 Inner membrane protein YedI AMQ28_03800 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMQ28_03800 IPR024109 Tryptophan-tRNA ligase, bacterial-type AMQ28_03800 IPR002305 Aminoacyl-tRNA synthetase, class Ic AMQ28_03800 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_03800 IPR002306 Tryptophan-tRNA ligase AMQ28_03805 IPR038636 Capsule assembly protein Wzi superfamily AMQ28_03805 IPR026950 Capsule assembly protein Wzi AMQ28_03810 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal AMQ28_03810 IPR012340 Nucleic acid-binding, OB-fold AMQ28_03810 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMQ28_03810 IPR002313 Lysine-tRNA ligase, class II AMQ28_03810 IPR006195 Aminoacyl-tRNA synthetase, class II AMQ28_03810 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AMQ28_03820 IPR029057 Phosphoribosyltransferase-like AMQ28_03820 IPR005764 Adenine phosphoribosyl transferase AMQ28_03820 IPR000836 Phosphoribosyltransferase domain AMQ28_03825 IPR018527 Rubredoxin, iron-binding site AMQ28_03825 IPR024934 Rubredoxin-like domain AMQ28_03825 IPR024935 Rubredoxin domain AMQ28_03825 IPR024922 Rubredoxin AMQ28_03830 IPR041364 Rubredoxin binding domain AMQ28_03830 IPR023753 FAD/NAD(P)-binding domain AMQ28_03830 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_03835 IPR029058 Alpha/Beta hydrolase fold AMQ28_03835 IPR000073 Alpha/beta hydrolase fold-1 AMQ28_03835 IPR011942 Poly(3-hydroxyalkanoate) depolymerase AMQ28_03840 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_03840 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_03840 IPR000847 Transcription regulator HTH, LysR AMQ28_03840 IPR005119 LysR, substrate-binding AMQ28_03845 IPR036830 Polyphosphate kinase middle domain superfamily AMQ28_03845 IPR025200 Polyphosphate kinase C-terminal domain 2 AMQ28_03845 IPR024953 Polyphosphate kinase middle domain AMQ28_03845 IPR041108 Polyphosphate kinase, C-terminal domain 1 AMQ28_03845 IPR003414 Polyphosphate kinase AMQ28_03845 IPR025198 Polyphosphate kinase N-terminal domain AMQ28_03845 IPR036832 Polyphosphate kinase N-terminal domain superfamily AMQ28_03850 IPR023346 Lysozyme-like domain superfamily AMQ28_03850 IPR001264 Glycosyl transferase, family 51 AMQ28_03850 IPR036950 Penicillin binding protein transglycosylase domain AMQ28_03850 IPR011812 Biosynthetic peptidoglycan transglycosylase AMQ28_03855 IPR035952 Rhomboid-like superfamily AMQ28_03855 IPR022764 Peptidase S54, rhomboid domain AMQ28_03860 IPR038766 Membrane component of ABC transporter, predicted AMQ28_03865 IPR003593 AAA+ ATPase domain AMQ28_03865 IPR003439 ABC transporter-like AMQ28_03865 IPR017871 ABC transporter, conserved site AMQ28_03865 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_03870 IPR036514 SGNH hydrolase superfamily AMQ28_03870 IPR013830 SGNH hydrolase-type esterase domain AMQ28_03875 IPR001765 Carbonic anhydrase AMQ28_03875 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site AMQ28_03875 IPR036874 Carbonic anhydrase superfamily AMQ28_03880 IPR000639 Epoxide hydrolase-like AMQ28_03880 IPR000073 Alpha/beta hydrolase fold-1 AMQ28_03880 IPR029058 Alpha/Beta hydrolase fold AMQ28_03890 IPR010917 TonB-dependent receptor, conserved site AMQ28_03890 IPR010916 TonB box, conserved site AMQ28_03890 IPR037066 TonB-dependent receptor, plug domain superfamily AMQ28_03890 IPR012910 TonB-dependent receptor, plug domain AMQ28_03890 IPR039426 Vitamin B12 transporter BtuB-like AMQ28_03890 IPR000531 TonB-dependent receptor-like, beta-barrel AMQ28_03890 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMQ28_03895 IPR000361 FeS cluster biogenesis AMQ28_03895 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal AMQ28_03895 IPR035903 HesB-like domain superfamily AMQ28_03895 IPR034904 Fe-S cluster assembly domain superfamily AMQ28_03895 IPR017726 Fe/S biogenesis protein NfuA AMQ28_03910 IPR001204 Phosphate transporter AMQ28_03915 IPR011005 Dihydropteroate synthase-like AMQ28_03915 IPR036589 Homocysteine-binding domain superfamily AMQ28_03915 IPR033706 Methionine synthase, B12-binding domain AMQ28_03915 IPR011822 Cobalamin-dependent methionine synthase AMQ28_03915 IPR036594 Methionine synthase domain AMQ28_03915 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily AMQ28_03915 IPR006158 Cobalamin (vitamin B12)-binding domain AMQ28_03915 IPR036724 Cobalamin-binding domain superfamily AMQ28_03915 IPR000489 Pterin-binding domain AMQ28_03915 IPR004223 Vitamin B12-dependent methionine synthase, activation domain AMQ28_03915 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMQ28_03915 IPR003726 Homocysteine-binding domain AMQ28_03920 IPR023635 Peptide deformylase AMQ28_03920 IPR036821 Peptide deformylase superfamily AMQ28_03960 IPR001173 Glycosyltransferase 2-like AMQ28_03960 IPR029044 Nucleotide-diphospho-sugar transferases AMQ28_03960 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA AMQ28_03985 IPR000182 GNAT domain AMQ28_03985 IPR016181 Acyl-CoA N-acyltransferase AMQ28_03990 IPR029787 Nucleotide cyclase AMQ28_03990 IPR029016 GAF-like domain superfamily AMQ28_03990 IPR000160 GGDEF domain AMQ28_03995 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMQ28_04000 IPR011335 Restriction endonuclease type II-like AMQ28_04000 IPR009822 YaeQ AMQ28_04000 IPR038590 YaeQ superfamily AMQ28_04005 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMQ28_04005 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMQ28_04005 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_04015 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain AMQ28_04015 IPR006683 Thioesterase domain AMQ28_04015 IPR029069 HotDog domain superfamily AMQ28_04015 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase AMQ28_04020 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMQ28_04020 IPR002641 Patatin-like phospholipase domain AMQ28_04020 IPR001423 Lysophospholipase patatin, conserved site AMQ28_04030 IPR004445 Sodium/glutamate symport carrier protein GltS AMQ28_04040 IPR029479 Nitroreductase AMQ28_04040 IPR000415 Nitroreductase-like AMQ28_04045 IPR036259 MFS transporter superfamily AMQ28_04045 IPR011701 Major facilitator superfamily AMQ28_04045 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AMQ28_04045 IPR020846 Major facilitator superfamily domain AMQ28_04050 IPR010019 Integral membrane protein, YccS AMQ28_04050 IPR010020 Integral membrane protein, YccS/YhfK AMQ28_04050 IPR032692 Integral membrane protein YccS, N-terminal AMQ28_04060 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily AMQ28_04060 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMQ28_04060 IPR017938 Riboflavin synthase-like beta-barrel AMQ28_04060 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMQ28_04060 IPR029039 Flavoprotein-like superfamily AMQ28_04060 IPR001094 Flavodoxin-like AMQ28_04060 IPR017927 FAD-binding domain, ferredoxin reductase-type AMQ28_04060 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMQ28_04060 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria AMQ28_04060 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding AMQ28_04060 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain AMQ28_04060 IPR008254 Flavodoxin/nitric oxide synthase AMQ28_04115 IPR005490 L,D-transpeptidase catalytic domain AMQ28_04115 IPR038063 L,D-transpeptidase catalytic domain-like AMQ28_04115 IPR041597 L,D-transpeptidase C-terminal domain AMQ28_04120 IPR007401 Protein of unknown function DUF454 AMQ28_04135 IPR002933 Peptidase M20 AMQ28_04135 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria AMQ28_04135 IPR036264 Bacterial exopeptidase dimerisation domain AMQ28_04135 IPR011650 Peptidase M20, dimerisation domain AMQ28_04145 IPR005467 Histidine kinase domain AMQ28_04145 IPR036061 CheW-like domain superfamily AMQ28_04145 IPR002545 CheW-like domain AMQ28_04145 IPR011006 CheY-like superfamily AMQ28_04145 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_04145 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_04145 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMQ28_04145 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AMQ28_04145 IPR001789 Signal transduction response regulator, receiver domain AMQ28_04145 IPR036641 HPT domain superfamily AMQ28_04155 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AMQ28_04155 IPR003660 HAMP domain AMQ28_04155 IPR004090 Chemotaxis methyl-accepting receptor AMQ28_04155 IPR029095 NarX-like, N-terminal AMQ28_04160 IPR039315 Chemotaxis protein CheW AMQ28_04160 IPR036061 CheW-like domain superfamily AMQ28_04160 IPR002545 CheW-like domain AMQ28_04165 IPR001789 Signal transduction response regulator, receiver domain AMQ28_04165 IPR011006 CheY-like superfamily AMQ28_04170 IPR001789 Signal transduction response regulator, receiver domain AMQ28_04170 IPR011006 CheY-like superfamily AMQ28_04185 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMQ28_04185 IPR001036 Acriflavin resistance protein AMQ28_04190 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AMQ28_04190 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily AMQ28_04190 IPR033730 Prokaryote proline-tRNA ligase core domain AMQ28_04190 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 AMQ28_04190 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type AMQ28_04190 IPR002316 Proline-tRNA ligase, class IIa AMQ28_04190 IPR036621 Anticodon-binding domain superfamily AMQ28_04190 IPR004154 Anticodon-binding AMQ28_04190 IPR006195 Aminoacyl-tRNA synthetase, class II AMQ28_04190 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AMQ28_04215 IPR029054 dUTPase-like AMQ28_04215 IPR033704 dUTPase, trimeric AMQ28_04215 IPR036157 dUTPase-like superfamily AMQ28_04215 IPR011962 dCTP deaminase AMQ28_04230 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_04230 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AMQ28_04230 IPR034904 Fe-S cluster assembly domain superfamily AMQ28_04230 IPR019591 Mrp/NBP35 ATP-binding protein AMQ28_04230 IPR000808 Mrp, conserved site AMQ28_04250 IPR025166 Integrase, DNA-binding domain AMQ28_04250 IPR002104 Integrase, catalytic domain AMQ28_04250 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMQ28_04250 IPR010998 Integrase/recombinase, N-terminal AMQ28_04250 IPR013762 Integrase-like, catalytic domain superfamily AMQ28_04250 IPR038488 Integrase, DNA-binding domain superfamily AMQ28_04330 IPR027806 Harbinger transposase-derived nuclease domain AMQ28_04330 IPR027805 Transposase, Helix-turn-helix domain AMQ28_04335 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMQ28_04335 IPR039444 SIR2-like domain AMQ28_04340 IPR012340 Nucleic acid-binding, OB-fold AMQ28_04340 IPR000424 Primosome PriB/single-strand DNA-binding AMQ28_04340 IPR011344 Single-stranded DNA-binding protein AMQ28_04370 IPR001207 Transposase, mutator type AMQ28_04390 IPR020846 Major facilitator superfamily domain AMQ28_04390 IPR011701 Major facilitator superfamily AMQ28_04390 IPR036259 MFS transporter superfamily AMQ28_04390 IPR004638 Drug resistance transporter EmrB-like AMQ28_04395 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMQ28_04395 IPR005694 Efflux pump membrane protein AMQ28_04400 IPR003736 Phenylacetic acid degradation-related domain AMQ28_04400 IPR029069 HotDog domain superfamily AMQ28_04400 IPR006683 Thioesterase domain AMQ28_04405 IPR030656 Delta-aminolevulinic acid dehydratase, active site AMQ28_04405 IPR013785 Aldolase-type TIM barrel AMQ28_04405 IPR001731 Delta-aminolevulinic acid dehydratase AMQ28_04410 IPR012727 Glycine oxidase ThiO AMQ28_04410 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_04410 IPR006076 FAD dependent oxidoreductase AMQ28_04415 IPR010099 Epimerase family protein SDR39U1 AMQ28_04415 IPR036291 NAD(P)-binding domain superfamily AMQ28_04415 IPR001509 NAD-dependent epimerase/dehydratase AMQ28_04415 IPR013549 Domain of unknown function DUF1731 AMQ28_04450 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMQ28_04455 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMQ28_04455 IPR001926 Pyridoxal-phosphate dependent enzyme AMQ28_04455 IPR005966 D-cysteine desulfhydrase AMQ28_04455 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AMQ28_04460 IPR023166 HI0933-like insert domain superfamily AMQ28_04460 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like AMQ28_04460 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_04465 IPR008910 Conserved TM helix AMQ28_04480 IPR017927 FAD-binding domain, ferredoxin reductase-type AMQ28_04480 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMQ28_04480 IPR033892 Ferredoxin--NADP reductase, bacteria AMQ28_04480 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMQ28_04480 IPR017938 Riboflavin synthase-like beta-barrel AMQ28_04480 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMQ28_04480 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMQ28_04485 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_04485 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_04485 IPR000847 Transcription regulator HTH, LysR AMQ28_04485 IPR005119 LysR, substrate-binding AMQ28_04500 IPR000836 Phosphoribosyltransferase domain AMQ28_04500 IPR029057 Phosphoribosyltransferase-like AMQ28_04500 IPR034332 Uracil phosphoribosyltransferase, bacterial-type AMQ28_04500 IPR005765 Uracil phosphoribosyl transferase AMQ28_04505 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AMQ28_04505 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 AMQ28_04510 IPR003918 NADH:ubiquinone oxidoreductase AMQ28_04510 IPR010227 NADH-quinone oxidoreductase, chain M/4 AMQ28_04510 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AMQ28_04515 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 AMQ28_04515 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup AMQ28_04515 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AMQ28_04515 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AMQ28_04520 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AMQ28_04520 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K AMQ28_04525 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 AMQ28_04525 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ AMQ28_04530 IPR010226 NADH-quinone oxidoreductase, chain I AMQ28_04530 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMQ28_04530 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMQ28_04535 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H AMQ28_04535 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site AMQ28_04540 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding AMQ28_04540 IPR010228 NADH:ubiquinone oxidoreductase, subunit G AMQ28_04540 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site AMQ28_04540 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AMQ28_04540 IPR009010 Aspartate decarboxylase-like domain superfamily AMQ28_04540 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMQ28_04540 IPR036010 2Fe-2S ferredoxin-like superfamily AMQ28_04540 IPR006656 Molybdopterin oxidoreductase AMQ28_04545 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site AMQ28_04545 IPR011537 NADH ubiquinone oxidoreductase, F subunit AMQ28_04545 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain AMQ28_04545 IPR019554 Soluble ligand binding domain AMQ28_04545 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily AMQ28_04545 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily AMQ28_04545 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain AMQ28_04550 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal AMQ28_04550 IPR042128 NuoE domain AMQ28_04550 IPR002023 NADH-quinone oxidoreductase subunit E-like AMQ28_04550 IPR036249 Thioredoxin-like superfamily AMQ28_04555 IPR023062 NADH dehydrogenase, subunit CD AMQ28_04555 IPR010218 NADH dehydrogenase, subunit C AMQ28_04555 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily AMQ28_04555 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit AMQ28_04555 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site AMQ28_04555 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site AMQ28_04555 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H AMQ28_04555 IPR029014 [NiFe]-hydrogenase, large subunit AMQ28_04555 IPR001135 NADH-quinone oxidoreductase, subunit D AMQ28_04555 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily AMQ28_04560 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AMQ28_04560 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit AMQ28_04565 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily AMQ28_04565 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 AMQ28_04565 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid AMQ28_04570 IPR025668 Transposase DDE domain AMQ28_04580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMQ28_04580 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_04580 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMQ28_04580 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_04580 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMQ28_04580 IPR005467 Histidine kinase domain AMQ28_04580 IPR003660 HAMP domain AMQ28_04585 IPR001867 OmpR/PhoB-type DNA-binding domain AMQ28_04585 IPR011006 CheY-like superfamily AMQ28_04585 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_04585 IPR016032 Signal transduction response regulator, C-terminal effector AMQ28_04585 IPR001789 Signal transduction response regulator, receiver domain AMQ28_04585 IPR039420 Transcriptional regulatory protein WalR-like AMQ28_04590 IPR005144 ATP-cone domain AMQ28_04590 IPR039718 Ribonucleoside-diphosphate reductase large subunit AMQ28_04590 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal AMQ28_04590 IPR013346 Ribonucleotide reductase, class I , alpha subunit AMQ28_04590 IPR000788 Ribonucleotide reductase large subunit, C-terminal AMQ28_04590 IPR013509 Ribonucleotide reductase large subunit, N-terminal AMQ28_04595 IPR009078 Ferritin-like superfamily AMQ28_04595 IPR012348 Ribonucleotide reductase-like AMQ28_04595 IPR033909 Ribonucleotide reductase small subunit AMQ28_04595 IPR000358 Ribonucleotide reductase small subunit family AMQ28_04600 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMQ28_04600 IPR006398 2-hydroxy-3-oxopropionate reductase AMQ28_04600 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AMQ28_04600 IPR036291 NAD(P)-binding domain superfamily AMQ28_04600 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AMQ28_04600 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMQ28_04600 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMQ28_04600 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AMQ28_04605 IPR036259 MFS transporter superfamily AMQ28_04605 IPR020846 Major facilitator superfamily domain AMQ28_04605 IPR011701 Major facilitator superfamily AMQ28_04610 IPR001509 NAD-dependent epimerase/dehydratase AMQ28_04610 IPR036291 NAD(P)-binding domain superfamily AMQ28_04615 IPR005119 LysR, substrate-binding AMQ28_04615 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_04615 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_04615 IPR000847 Transcription regulator HTH, LysR AMQ28_04625 IPR042096 Dihydroxy-acid dehydratase, C-terminal AMQ28_04625 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AMQ28_04625 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AMQ28_04625 IPR037237 IlvD/EDD, N-terminal domain AMQ28_04630 IPR016163 Aldehyde dehydrogenase, C-terminal AMQ28_04630 IPR016162 Aldehyde dehydrogenase, N-terminal AMQ28_04630 IPR015590 Aldehyde dehydrogenase domain AMQ28_04630 IPR016161 Aldehyde/histidinol dehydrogenase AMQ28_04640 IPR019405 Lactonase, 7-bladed beta propeller AMQ28_04640 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AMQ28_04640 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AMQ28_04645 IPR015590 Aldehyde dehydrogenase domain AMQ28_04645 IPR016162 Aldehyde dehydrogenase, N-terminal AMQ28_04645 IPR016163 Aldehyde dehydrogenase, C-terminal AMQ28_04645 IPR016161 Aldehyde/histidinol dehydrogenase AMQ28_04655 IPR036259 MFS transporter superfamily AMQ28_04655 IPR020846 Major facilitator superfamily domain AMQ28_04655 IPR011701 Major facilitator superfamily AMQ28_04660 IPR042096 Dihydroxy-acid dehydratase, C-terminal AMQ28_04660 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AMQ28_04660 IPR037237 IlvD/EDD, N-terminal domain AMQ28_04660 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AMQ28_04665 IPR011711 GntR, C-terminal AMQ28_04665 IPR008920 Transcription regulator FadR/GntR, C-terminal AMQ28_04665 IPR000524 Transcription regulator HTH, GntR AMQ28_04665 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_04665 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_04670 IPR036291 NAD(P)-binding domain superfamily AMQ28_04670 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMQ28_04670 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMQ28_04670 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMQ28_04675 IPR036779 LysM domain superfamily AMQ28_04675 IPR007055 BON domain AMQ28_04675 IPR018392 LysM domain AMQ28_04675 IPR014004 Transport-associated and nodulation domain, bacteria AMQ28_04680 IPR006664 Outer membrane protein, bacterial AMQ28_04680 IPR027385 Outer membrane protein beta-barrel domain AMQ28_04680 IPR006665 OmpA-like domain AMQ28_04680 IPR036737 OmpA-like domain superfamily AMQ28_04680 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMQ28_04690 IPR020610 Thiolase, active site AMQ28_04690 IPR020617 Thiolase, C-terminal AMQ28_04690 IPR020615 Thiolase, acyl-enzyme intermediate active site AMQ28_04690 IPR016039 Thiolase-like AMQ28_04690 IPR002155 Thiolase AMQ28_04690 IPR020613 Thiolase, conserved site AMQ28_04690 IPR020616 Thiolase, N-terminal AMQ28_04705 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AMQ28_04705 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AMQ28_04705 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AMQ28_04705 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AMQ28_04710 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMQ28_04710 IPR017511 PQQ-dependent membrane bound dehydrogenase AMQ28_04710 IPR002372 Pyrrolo-quinoline quinone repeat AMQ28_04710 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMQ28_04710 IPR001479 Quinoprotein dehydrogenase, conserved site AMQ28_04715 IPR007049 Carbohydrate-selective porin OprB AMQ28_04715 IPR038673 Carbohydrate-selective porin OprB superfamily AMQ28_04720 IPR023606 CoA-transferase family III domain superfamily AMQ28_04720 IPR003673 CoA-transferase family III AMQ28_04725 IPR018060 DNA binding HTH domain, AraC-type AMQ28_04725 IPR037923 Transcription regulator HTH-like AMQ28_04725 IPR018062 HTH domain AraC-type, conserved site AMQ28_04725 IPR020449 Transcription regulator HTH, AraC- type AMQ28_04725 IPR009057 Homeobox-like domain superfamily AMQ28_04725 IPR003313 AraC-type arabinose-binding/dimerisation domain AMQ28_04730 IPR020610 Thiolase, active site AMQ28_04730 IPR020615 Thiolase, acyl-enzyme intermediate active site AMQ28_04730 IPR020613 Thiolase, conserved site AMQ28_04730 IPR020617 Thiolase, C-terminal AMQ28_04730 IPR020616 Thiolase, N-terminal AMQ28_04730 IPR016039 Thiolase-like AMQ28_04730 IPR002155 Thiolase AMQ28_04735 IPR036291 NAD(P)-binding domain superfamily AMQ28_04735 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMQ28_04735 IPR029045 ClpP/crotonase-like domain superfamily AMQ28_04735 IPR001753 Enoyl-CoA hydratase/isomerase AMQ28_04735 IPR012802 Fatty oxidation complex, alpha subunit FadJ AMQ28_04735 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMQ28_04735 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMQ28_04735 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AMQ28_04745 IPR039143 Glucosamine 6-phosphate N-acetyltransferase AMQ28_04745 IPR016181 Acyl-CoA N-acyltransferase AMQ28_04745 IPR000182 GNAT domain AMQ28_04750 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AMQ28_04750 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain AMQ28_04750 IPR035937 MutM-like, N-terminal AMQ28_04750 IPR010663 Zinc finger, FPG/IleRS-type AMQ28_04750 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type AMQ28_04750 IPR020629 Formamidopyrimidine-DNA glycosylase AMQ28_04750 IPR010979 Ribosomal protein S13-like, H2TH AMQ28_04755 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AMQ28_04755 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AMQ28_04760 IPR036019 Gated mechanosensitive channel AMQ28_04760 IPR019823 Large-conductance mechanosensitive channel, conserved site AMQ28_04760 IPR001185 Large-conductance mechanosensitive channel AMQ28_04760 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L AMQ28_04770 IPR006043 Xanthine/uracil/vitamin C permease AMQ28_04770 IPR006042 Xanthine/uracil permease AMQ28_04775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_04775 IPR023543 rRNA small subunit methyltransferase C AMQ28_04775 IPR013675 Methyltransferase small, N-terminal AMQ28_04775 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMQ28_04775 IPR007848 Methyltransferase small domain AMQ28_04780 IPR004841 Amino acid permease/ SLC12A domain AMQ28_04780 IPR004840 Amino acid permease, conserved site AMQ28_04785 IPR009081 Phosphopantetheine binding ACP domain AMQ28_04785 IPR003231 Acyl carrier protein (ACP) AMQ28_04785 IPR036736 ACP-like superfamily AMQ28_04785 IPR006162 Phosphopantetheine attachment site AMQ28_04790 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMQ28_04790 IPR036291 NAD(P)-binding domain superfamily AMQ28_04790 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMQ28_04790 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_04795 IPR001227 Acyl transferase domain superfamily AMQ28_04795 IPR014043 Acyl transferase AMQ28_04795 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMQ28_04795 IPR024925 Malonyl CoA-acyl carrier protein transacylase AMQ28_04795 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type AMQ28_04795 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMQ28_04800 IPR002677 Ribosomal protein L32p AMQ28_04800 IPR011332 Zinc-binding ribosomal protein AMQ28_04805 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AMQ28_04805 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria AMQ28_04810 IPR007411 Elongation factor P hydroxylase AMQ28_04815 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMQ28_04815 IPR006070 YrdC-like domain AMQ28_04825 IPR003768 Segregation and condensation protein A AMQ28_04830 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_04830 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_04830 IPR005234 Chromosome segregation/condensation protein ScpB AMQ28_04840 IPR004472 Dethiobiotin synthase BioD AMQ28_04840 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_04845 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC AMQ28_04845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_04845 IPR013216 Methyltransferase type 11 AMQ28_04850 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AMQ28_04850 IPR004839 Aminotransferase, class I/classII AMQ28_04850 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_04850 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_04850 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type AMQ28_04850 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_04855 IPR013785 Aldolase-type TIM barrel AMQ28_04855 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_04855 IPR006638 Elp3/MiaB/NifB AMQ28_04855 IPR007197 Radical SAM AMQ28_04855 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB AMQ28_04855 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA AMQ28_04855 IPR010722 Biotin and thiamin synthesis-associated domain AMQ28_04855 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_04855 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_04855 IPR005814 Aminotransferase class-III AMQ28_04860 IPR000073 Alpha/beta hydrolase fold-1 AMQ28_04860 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC AMQ28_04860 IPR013216 Methyltransferase type 11 AMQ28_04860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_04860 IPR029058 Alpha/Beta hydrolase fold AMQ28_04865 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AMQ28_04865 IPR024706 Peroxiredoxin, AhpC-type AMQ28_04865 IPR036249 Thioredoxin-like superfamily AMQ28_04865 IPR013766 Thioredoxin domain AMQ28_04870 IPR008331 Ferritin/DPS protein domain AMQ28_04870 IPR009078 Ferritin-like superfamily AMQ28_04870 IPR009040 Ferritin-like diiron domain AMQ28_04870 IPR002024 Bacterioferritin AMQ28_04870 IPR012347 Ferritin-like AMQ28_04890 IPR038717 Tc1-like transposase, DDE domain AMQ28_04895 IPR036526 Carbon-nitrogen hydrolase superfamily AMQ28_04895 IPR000132 Nitrilase/cyanide hydratase, conserved site AMQ28_04895 IPR003010 Carbon-nitrogen hydrolase AMQ28_04900 IPR036397 Ribonuclease H superfamily AMQ28_04900 IPR009057 Homeobox-like domain superfamily AMQ28_04900 IPR001584 Integrase, catalytic core AMQ28_04900 IPR012337 Ribonuclease H-like superfamily AMQ28_04910 IPR002514 Transposase IS3/IS911family AMQ28_04910 IPR009057 Homeobox-like domain superfamily AMQ28_04910 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_04915 IPR012337 Ribonuclease H-like superfamily AMQ28_04915 IPR025948 HTH-like domain AMQ28_04915 IPR001584 Integrase, catalytic core AMQ28_04915 IPR036397 Ribonuclease H superfamily AMQ28_04925 IPR001387 Cro/C1-type helix-turn-helix domain AMQ28_04925 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMQ28_04935 IPR001357 BRCT domain AMQ28_04935 IPR036420 BRCT domain superfamily AMQ28_04935 IPR001679 NAD-dependent DNA ligase AMQ28_04935 IPR013839 NAD-dependent DNA ligase, adenylation AMQ28_04935 IPR012340 Nucleic acid-binding, OB-fold AMQ28_04935 IPR010994 RuvA domain 2-like AMQ28_04935 IPR004150 NAD-dependent DNA ligase, OB-fold AMQ28_04935 IPR013840 NAD-dependent DNA ligase, N-terminal AMQ28_04950 IPR011890 Structural maintenance of chromosomes protein, prokaryotic AMQ28_04950 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_04950 IPR036277 SMCs flexible hinge superfamily AMQ28_04950 IPR003395 RecF/RecN/SMC, N-terminal AMQ28_04950 IPR010935 SMCs flexible hinge AMQ28_04950 IPR024704 Structural maintenance of chromosomes protein AMQ28_04960 IPR002781 Transmembrane protein TauE-like AMQ28_04970 IPR004619 Type III pantothenate kinase AMQ28_04975 IPR010662 Putative hydrolase RBBP9/YdeN AMQ28_04975 IPR029058 Alpha/Beta hydrolase fold AMQ28_04980 IPR022941 Signal recognition particle, SRP54 subunit AMQ28_04980 IPR003593 AAA+ ATPase domain AMQ28_04980 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_04980 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AMQ28_04980 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily AMQ28_04980 IPR013822 Signal recognition particle SRP54, helical bundle AMQ28_04980 IPR004125 Signal recognition particle, SRP54 subunit, M-domain AMQ28_04980 IPR004780 Signal recognition particle protein AMQ28_04980 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AMQ28_05010 IPR013785 Aldolase-type TIM barrel AMQ28_05010 IPR001269 tRNA-dihydrouridine synthase AMQ28_05010 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal AMQ28_05010 IPR035587 DUS-like, FMN-binding domain AMQ28_05010 IPR032886 tRNA-dihydrouridine(16) synthase AMQ28_05010 IPR018517 tRNA-dihydrouridine synthase, conserved site AMQ28_05015 IPR011528 Nuclease-related domain, NERD AMQ28_05020 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site AMQ28_05020 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AMQ28_05020 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain AMQ28_05020 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain AMQ28_05020 IPR023546 Methylated-DNA--protein-cysteine methyltransferase AMQ28_05020 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily AMQ28_05020 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_05025 IPR000390 Small multidrug resistance protein family AMQ28_05030 IPR007939 Copper resistance B precursor AMQ28_05035 IPR011707 Multicopper oxidase, type 3 AMQ28_05035 IPR006376 Copper-resistance protein CopA AMQ28_05035 IPR033138 Multicopper oxidases, conserved site AMQ28_05035 IPR002355 Multicopper oxidase, copper-binding site AMQ28_05035 IPR008972 Cupredoxin AMQ28_05035 IPR011706 Multicopper oxidase, type 2 AMQ28_05035 IPR034284 Copper resistance protein, first cupredoxin domain AMQ28_05035 IPR034282 Copper resistance protein CopA, second cupredoxin domain AMQ28_05035 IPR034279 Copper resistance protein, third cupredoxin domain AMQ28_05035 IPR006311 Twin-arginine translocation pathway, signal sequence AMQ28_05035 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMQ28_05035 IPR001117 Multicopper oxidase, type 1 AMQ28_05045 IPR026019 Ribulose-phosphate 3-epimerase AMQ28_05045 IPR013785 Aldolase-type TIM barrel AMQ28_05045 IPR000056 Ribulose-phosphate 3-epimerase-like AMQ28_05045 IPR011060 Ribulose-phosphate binding barrel AMQ28_05055 IPR029058 Alpha/Beta hydrolase fold AMQ28_05055 IPR000801 Putative esterase AMQ28_05055 IPR014186 S-formylglutathione hydrolase AMQ28_05065 IPR007536 Ribosomal RNA small subunit methyltransferase J AMQ28_05065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_05070 IPR003824 Undecaprenyl-diphosphatase UppP AMQ28_05075 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB AMQ28_05075 IPR000905 Gcp-like domain AMQ28_05080 IPR011004 Trimeric LpxA-like superfamily AMQ28_05080 IPR001451 Hexapeptide repeat AMQ28_05085 IPR015797 NUDIX hydrolase-like domain superfamily AMQ28_05085 IPR000086 NUDIX hydrolase domain AMQ28_05085 IPR023735 Uncharacterised nudix hydrolase NudL AMQ28_05085 IPR000059 NUDIX hydrolase, NudL, conserved site AMQ28_05125 IPR006805 Anthranilate synthase component I, N-terminal AMQ28_05125 IPR019999 Anthranilate synthase component I-like AMQ28_05125 IPR005802 Aminodeoxychorismate synthase, component I AMQ28_05125 IPR015890 Chorismate-utilising enzyme, C-terminal AMQ28_05125 IPR005801 ADC synthase AMQ28_05130 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_05130 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_05130 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_05130 IPR004839 Aminotransferase, class I/classII AMQ28_05130 IPR005861 Histidinol-phosphate aminotransferase family AMQ28_05135 IPR001692 Histidinol dehydrogenase, conserved site AMQ28_05135 IPR022695 Histidinol dehydrogenase, monofunctional AMQ28_05135 IPR012131 Histidinol dehydrogenase AMQ28_05135 IPR016161 Aldehyde/histidinol dehydrogenase AMQ28_05140 IPR018198 ATP phosphoribosyltransferase, conserved site AMQ28_05140 IPR013820 ATP phosphoribosyltransferase, catalytic domain AMQ28_05140 IPR024893 ATP phosphoribosyltransferase HisG, short form AMQ28_05140 IPR001348 ATP phosphoribosyltransferase HisG AMQ28_05145 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AMQ28_05145 IPR036968 Enolpyruvate transferase domain superfamily AMQ28_05145 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase AMQ28_05145 IPR001986 Enolpyruvate transferase domain AMQ28_05150 IPR002634 BolA protein AMQ28_05150 IPR036065 BolA-like superfamily AMQ28_05155 IPR003489 Ribosome hibernation promoting factor/RaiA AMQ28_05155 IPR036567 Ribosome hibernation promotion factor-like AMQ28_05160 IPR000394 RNA polymerase sigma factor 54 AMQ28_05160 IPR007046 RNA polymerase sigma factor 54, core-binding domain AMQ28_05160 IPR007634 RNA polymerase sigma factor 54, DNA-binding AMQ28_05160 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily AMQ28_05205 IPR001110 Uncharacterised protein family UPF0012, conserved site AMQ28_05205 IPR036526 Carbon-nitrogen hydrolase superfamily AMQ28_05205 IPR003010 Carbon-nitrogen hydrolase AMQ28_05210 IPR003718 OsmC/Ohr family AMQ28_05210 IPR015946 K homology domain-like, alpha/beta AMQ28_05210 IPR019953 Organic hydroperoxide resistance protein famiy AMQ28_05210 IPR036102 OsmC/Ohr superfamily AMQ28_05215 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_05215 IPR001482 Type II/IV secretion system protein AMQ28_05215 IPR013369 Type II secretion system GspE AMQ28_05215 IPR042181 Type II secretion system, protein E, N-terminal AMQ28_05215 IPR037257 General secretory system II, protein E, N-terminal superfamily AMQ28_05235 IPR019760 DNA-directed DNA polymerase, family A, conserved site AMQ28_05235 IPR020045 DNA polymerase I-like, H3TH domain AMQ28_05235 IPR001098 DNA-directed DNA polymerase, family A, palm domain AMQ28_05235 IPR018320 DNA polymerase 1 AMQ28_05235 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AMQ28_05235 IPR012337 Ribonuclease H-like superfamily AMQ28_05235 IPR002298 DNA polymerase A AMQ28_05235 IPR029060 PIN-like domain superfamily AMQ28_05235 IPR002421 5'-3' exonuclease, N-terminal AMQ28_05235 IPR036397 Ribonuclease H superfamily AMQ28_05235 IPR002562 3'-5' exonuclease domain AMQ28_05235 IPR008918 Helix-hairpin-helix motif, class 2 AMQ28_05235 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal AMQ28_05240 IPR003425 CCB3/YggT AMQ28_05245 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMQ28_05245 IPR036291 NAD(P)-binding domain superfamily AMQ28_05245 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMQ28_05245 IPR000304 Pyrroline-5-carboxylate reductase AMQ28_05245 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain AMQ28_05250 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain AMQ28_05250 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal AMQ28_05250 IPR012094 tRNA(Ile)-lysidine synthase AMQ28_05250 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AMQ28_05250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_05250 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal AMQ28_05255 IPR001095 Acetyl-CoA carboxylase, alpha subunit AMQ28_05255 IPR029045 ClpP/crotonase-like domain superfamily AMQ28_05255 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AMQ28_05260 IPR003695 Ppx/GppA phosphatase AMQ28_05260 IPR030673 Pyrophosphatase, GppA/Ppx-type AMQ28_05260 IPR022371 Exopolyphosphatase AMQ28_05265 IPR005746 Thioredoxin AMQ28_05265 IPR013766 Thioredoxin domain AMQ28_05265 IPR017937 Thioredoxin, conserved site AMQ28_05265 IPR036249 Thioredoxin-like superfamily AMQ28_05270 IPR003593 AAA+ ATPase domain AMQ28_05270 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AMQ28_05270 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_05270 IPR041703 Transcription termination factor Rho, ATP binding domain AMQ28_05270 IPR004665 Transcription termination factor Rho AMQ28_05270 IPR011113 Rho termination factor, RNA-binding domain AMQ28_05270 IPR036269 Rho termination factor, N-terminal domain superfamily AMQ28_05270 IPR011112 Rho termination factor, N-terminal AMQ28_05270 IPR012340 Nucleic acid-binding, OB-fold AMQ28_05270 IPR011129 Cold shock domain AMQ28_05280 IPR020816 Histone-like DNA-binding protein, conserved site AMQ28_05280 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AMQ28_05280 IPR000119 Histone-like DNA-binding protein AMQ28_05280 IPR005684 Integration host factor, alpha subunit AMQ28_05285 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit AMQ28_05285 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMQ28_05285 IPR005121 Ferrodoxin-fold anticodon-binding domain AMQ28_05285 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain AMQ28_05285 IPR012340 Nucleic acid-binding, OB-fold AMQ28_05285 IPR002547 tRNA-binding domain AMQ28_05285 IPR009061 Putative DNA-binding domain superfamily AMQ28_05285 IPR005146 B3/B4 tRNA-binding domain AMQ28_05285 IPR005147 tRNA synthetase, B5-domain AMQ28_05285 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain AMQ28_05285 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily AMQ28_05290 IPR002319 Phenylalanyl-tRNA synthetase AMQ28_05290 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AMQ28_05290 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial AMQ28_05290 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit AMQ28_05290 IPR006195 Aminoacyl-tRNA synthetase, class II AMQ28_05290 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal AMQ28_05305 IPR035985 Ubiquitin-activating enzyme AMQ28_05305 IPR000594 THIF-type NAD/FAD binding fold AMQ28_05310 IPR013520 Exonuclease, RNase T/DNA polymerase III AMQ28_05310 IPR022894 Oligoribonuclease AMQ28_05310 IPR012337 Ribonuclease H-like superfamily AMQ28_05310 IPR036397 Ribonuclease H superfamily AMQ28_05315 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain AMQ28_05315 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_05315 IPR004881 Ribosome biogenesis GTPase RsgA AMQ28_05315 IPR010914 RsgA GTPase domain AMQ28_05325 IPR036249 Thioredoxin-like superfamily AMQ28_05325 IPR014025 Glutaredoxin subgroup AMQ28_05325 IPR011900 Glutaredoxin, GrxC AMQ28_05325 IPR011767 Glutaredoxin active site AMQ28_05325 IPR002109 Glutaredoxin AMQ28_05330 IPR035958 SecB-like superfamily AMQ28_05330 IPR003708 Bacterial protein export chaperone SecB AMQ28_05335 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_05335 IPR036291 NAD(P)-binding domain superfamily AMQ28_05335 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) AMQ28_05345 IPR018228 Deoxyribonuclease, TatD-related, conserved site AMQ28_05345 IPR015991 Uncharacterised hydrolase TatD-type AMQ28_05345 IPR032466 Metal-dependent hydrolase AMQ28_05345 IPR001130 TatD family AMQ28_05360 IPR009000 Translation protein, beta-barrel domain superfamily AMQ28_05360 IPR004161 Translation elongation factor EFTu-like, domain 2 AMQ28_05360 IPR031157 Tr-type G domain, conserved site AMQ28_05360 IPR035647 EF-G domain III/V-like AMQ28_05360 IPR032090 Peptide chain release factor 3, C-terminal AMQ28_05360 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily AMQ28_05360 IPR004548 Peptide chain release factor 3 AMQ28_05360 IPR041732 Peptide chain release factor 3, GTP-binding domain AMQ28_05360 IPR005225 Small GTP-binding protein domain AMQ28_05360 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_05360 IPR000795 Transcription factor, GTP-binding domain AMQ28_05375 IPR006935 Helicase/UvrB, N-terminal AMQ28_05375 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_05375 IPR014883 VRR-NUC domain AMQ28_05380 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMQ28_05380 IPR002941 DNA methylase N-4/N-6 AMQ28_05380 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class AMQ28_05380 IPR041405 Type III R-M EcoP15I, C-terminal AMQ28_05380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_05390 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMQ28_05390 IPR000330 SNF2-related, N-terminal domain AMQ28_05390 IPR038718 SNF2-like, N-terminal domain superfamily AMQ28_05390 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_05390 IPR001650 Helicase, C-terminal AMQ28_05445 IPR029787 Nucleotide cyclase AMQ28_05445 IPR001633 EAL domain AMQ28_05445 IPR035919 EAL domain superfamily AMQ28_05445 IPR000160 GGDEF domain AMQ28_05445 IPR005330 MHYT domain AMQ28_05455 IPR020992 Tail specific protease, C-terminal AMQ28_05455 IPR005151 Tail specific protease AMQ28_05455 IPR004447 C-terminal-processing peptidase S41A AMQ28_05455 IPR036034 PDZ superfamily AMQ28_05455 IPR040573 Tail specific protease, N-terminal domain AMQ28_05455 IPR001478 PDZ domain AMQ28_05455 IPR029045 ClpP/crotonase-like domain superfamily AMQ28_05460 IPR001764 Glycoside hydrolase, family 3, N-terminal AMQ28_05460 IPR017853 Glycoside hydrolase superfamily AMQ28_05460 IPR022956 Beta-hexosaminidase, bacterial AMQ28_05460 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMQ28_05460 IPR019800 Glycoside hydrolase, family 3, active site AMQ28_05470 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase AMQ28_05470 IPR029058 Alpha/Beta hydrolase fold AMQ28_05470 IPR000073 Alpha/beta hydrolase fold-1 AMQ28_05470 IPR000639 Epoxide hydrolase-like AMQ28_05475 IPR012134 Glutamate-5-semialdehyde dehydrogenase AMQ28_05475 IPR016161 Aldehyde/histidinol dehydrogenase AMQ28_05475 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site AMQ28_05475 IPR016162 Aldehyde dehydrogenase, N-terminal AMQ28_05475 IPR015590 Aldehyde dehydrogenase domain AMQ28_05475 IPR000965 GPR domain AMQ28_05475 IPR016163 Aldehyde dehydrogenase, C-terminal AMQ28_05485 IPR004372 Acetate/propionate kinase AMQ28_05485 IPR000890 Aliphatic acid kinase, short-chain AMQ28_05485 IPR023865 Aliphatic acid kinase, short-chain, conserved site AMQ28_05490 IPR004614 Phosphate acetyltransferase AMQ28_05490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_05490 IPR016475 Phosphate acetyltransferase, bacteria AMQ28_05490 IPR010766 DRTGG AMQ28_05490 IPR002505 Phosphate acetyl/butaryl transferase AMQ28_05490 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AMQ28_05490 IPR042112 Phosphate acetyltransferase, domain 2 AMQ28_05490 IPR042113 Phosphate acetyltransferase, domain 1 AMQ28_05495 IPR005271 Carboxy-S-adenosyl-L-methionine synthase AMQ28_05495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_05495 IPR041698 Methyltransferase domain 25 AMQ28_05500 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily AMQ28_05500 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain AMQ28_05500 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain AMQ28_05500 IPR020557 Fumarate lyase, conserved site AMQ28_05500 IPR011167 Iron-dependent fumarate hydratase AMQ28_05505 IPR001584 Integrase, catalytic core AMQ28_05505 IPR025948 HTH-like domain AMQ28_05505 IPR038965 Transposase InsF-like AMQ28_05505 IPR012337 Ribonuclease H-like superfamily AMQ28_05505 IPR036397 Ribonuclease H superfamily AMQ28_05520 IPR004487 Clp protease, ATP-binding subunit ClpX AMQ28_05520 IPR003593 AAA+ ATPase domain AMQ28_05520 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_05520 IPR038366 Zinc finger, ClpX C4-type superfamily AMQ28_05520 IPR003959 ATPase, AAA-type, core AMQ28_05520 IPR010603 Zinc finger, ClpX C4-type AMQ28_05520 IPR019489 Clp ATPase, C-terminal AMQ28_05525 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMQ28_05525 IPR018215 ClpP, Ser active site AMQ28_05525 IPR033135 ClpP, histidine active site AMQ28_05525 IPR001907 ATP-dependent Clp protease proteolytic subunit AMQ28_05525 IPR029045 ClpP/crotonase-like domain superfamily AMQ28_05530 IPR037041 Trigger factor, C-terminal domain superfamily AMQ28_05530 IPR027304 Trigger factor/SurA domain superfamily AMQ28_05530 IPR036611 Trigger factor ribosome-binding domain superfamily AMQ28_05530 IPR008880 Trigger factor, C-terminal AMQ28_05530 IPR005215 Trigger factor AMQ28_05530 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMQ28_05530 IPR008881 Trigger factor, ribosome-binding, bacterial AMQ28_05535 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMQ28_05535 IPR039426 Vitamin B12 transporter BtuB-like AMQ28_05535 IPR012910 TonB-dependent receptor, plug domain AMQ28_05535 IPR010917 TonB-dependent receptor, conserved site AMQ28_05535 IPR010916 TonB box, conserved site AMQ28_05535 IPR000531 TonB-dependent receptor-like, beta-barrel AMQ28_05535 IPR037066 TonB-dependent receptor, plug domain superfamily AMQ28_05540 IPR010105 TonB-dependent siderophore receptor AMQ28_05540 IPR000531 TonB-dependent receptor-like, beta-barrel AMQ28_05540 IPR039423 TonB-dependent receptor-like AMQ28_05540 IPR037066 TonB-dependent receptor, plug domain superfamily AMQ28_05540 IPR012910 TonB-dependent receptor, plug domain AMQ28_05540 IPR030148 Catecholate siderophore receptor Fiu AMQ28_05540 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMQ28_05545 IPR006620 Prolyl 4-hydroxylase, alpha subunit AMQ28_05545 IPR023550 PKHD-type hydroxylase AMQ28_05545 IPR005123 Oxoglutarate/iron-dependent dioxygenase AMQ28_05545 IPR041097 PKHD-type hydroxylase C-terminal domain AMQ28_05550 IPR039423 TonB-dependent receptor-like AMQ28_05550 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMQ28_05550 IPR030148 Catecholate siderophore receptor Fiu AMQ28_05550 IPR037066 TonB-dependent receptor, plug domain superfamily AMQ28_05550 IPR010105 TonB-dependent siderophore receptor AMQ28_05550 IPR012910 TonB-dependent receptor, plug domain AMQ28_05550 IPR000531 TonB-dependent receptor-like, beta-barrel AMQ28_05550 IPR010916 TonB box, conserved site AMQ28_05555 IPR041097 PKHD-type hydroxylase C-terminal domain AMQ28_05555 IPR005123 Oxoglutarate/iron-dependent dioxygenase AMQ28_05555 IPR023550 PKHD-type hydroxylase AMQ28_05555 IPR006620 Prolyl 4-hydroxylase, alpha subunit AMQ28_05560 IPR013785 Aldolase-type TIM barrel AMQ28_05560 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent AMQ28_05560 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site AMQ28_05560 IPR000262 FMN-dependent dehydrogenase AMQ28_05560 IPR037396 FMN hydroxy acid dehydrogenase domain AMQ28_05565 IPR000891 Pyruvate carboxyltransferase AMQ28_05565 IPR005668 2-isopropylmalate synthase AMQ28_05565 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AMQ28_05565 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily AMQ28_05565 IPR039371 LeuA, N-terminal catalytic TIM barrel domain AMQ28_05565 IPR013785 Aldolase-type TIM barrel AMQ28_05565 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AMQ28_05570 IPR000073 Alpha/beta hydrolase fold-1 AMQ28_05570 IPR029058 Alpha/Beta hydrolase fold AMQ28_05570 IPR008220 Homoserine/serine acetyltransferase MetX-like AMQ28_05575 IPR010743 Methionine biosynthesis MetW AMQ28_05575 IPR000073 Alpha/beta hydrolase fold-1 AMQ28_05575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_05575 IPR029058 Alpha/Beta hydrolase fold AMQ28_05575 IPR008220 Homoserine/serine acetyltransferase MetX-like AMQ28_05585 IPR020922 dITP/XTP pyrophosphatase AMQ28_05585 IPR002637 Ham1-like protein AMQ28_05585 IPR029001 Inosine triphosphate pyrophosphatase-like AMQ28_05595 IPR006312 Sec-independent protein translocase protein TatA/E AMQ28_05595 IPR003369 Sec-independent protein translocase protein TatA/B/E AMQ28_05605 IPR019820 Sec-independent periplasmic protein translocase, conserved site AMQ28_05605 IPR002033 Sec-independent periplasmic protein translocase TatC AMQ28_05620 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt AMQ28_05635 IPR035566 Ribosomal protein L20, C-terminal AMQ28_05635 IPR005813 Ribosomal protein L20 AMQ28_05640 IPR021137 Ribosomal protein L35 AMQ28_05640 IPR018265 Ribosomal protein L35, conserved site AMQ28_05640 IPR037229 Ribosomal protein L35 superfamily AMQ28_05640 IPR001706 Ribosomal protein L35, non-mitochondrial AMQ28_05650 IPR032816 SNARE associated Golgi protein AMQ28_05660 IPR036249 Thioredoxin-like superfamily AMQ28_05660 IPR004046 Glutathione S-transferase, C-terminal AMQ28_05660 IPR004045 Glutathione S-transferase, N-terminal AMQ28_05660 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMQ28_05660 IPR010987 Glutathione S-transferase, C-terminal-like AMQ28_05665 IPR002068 Alpha crystallin/Hsp20 domain AMQ28_05665 IPR008978 HSP20-like chaperone AMQ28_05665 IPR023728 Small heat shock protein IbpA AMQ28_05665 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain AMQ28_05675 IPR001288 Translation initiation factor 3 AMQ28_05675 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily AMQ28_05675 IPR019814 Translation initiation factor 3, N-terminal AMQ28_05675 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily AMQ28_05675 IPR019815 Translation initiation factor 3, C-terminal AMQ28_05680 IPR036621 Anticodon-binding domain superfamily AMQ28_05680 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AMQ28_05680 IPR012675 Beta-grasp domain superfamily AMQ28_05680 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AMQ28_05680 IPR033728 Threonine-tRNA ligase catalytic core domain AMQ28_05680 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AMQ28_05680 IPR002320 Threonine-tRNA ligase, class IIa AMQ28_05680 IPR012676 TGS-like AMQ28_05680 IPR004095 TGS AMQ28_05680 IPR004154 Anticodon-binding AMQ28_05680 IPR006195 Aminoacyl-tRNA synthetase, class II AMQ28_05685 IPR025110 AMP-binding enzyme, C-terminal domain AMQ28_05685 IPR000873 AMP-dependent synthetase/ligase AMQ28_05685 IPR020845 AMP-binding, conserved site AMQ28_05685 IPR042099 AMP-dependent synthetase-like superfamily AMQ28_05690 IPR023153 PSPTO4464-like domain superfamily AMQ28_05690 IPR006839 Ribosome-associated, YjgA AMQ28_05695 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AMQ28_05695 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AMQ28_05695 IPR035895 HPr-like superfamily AMQ28_05695 IPR000032 Phosphocarrier protein HPr-like AMQ28_05700 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_05700 IPR005337 RapZ-like family AMQ28_05705 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain AMQ28_05705 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_05705 IPR003721 Pantoate-beta-alanine ligase AMQ28_05705 IPR004821 Cytidyltransferase-like domain AMQ28_05710 IPR040442 Pyruvate kinase-like domain superfamily AMQ28_05710 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMQ28_05710 IPR003700 Ketopantoate hydroxymethyltransferase AMQ28_05715 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK AMQ28_05715 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily AMQ28_05720 IPR002646 Poly A polymerase, head domain AMQ28_05720 IPR010206 Poly(A) polymerase I AMQ28_05720 IPR025866 Polymerase A arginine-rich C-terminal domain AMQ28_05720 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AMQ28_05725 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AMQ28_05725 IPR010994 RuvA domain 2-like AMQ28_05725 IPR019554 Soluble ligand binding domain AMQ28_05725 IPR004787 Competence protein ComEA AMQ28_05725 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AMQ28_05730 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMQ28_05730 IPR011551 NTP pyrophosphohydrolase MazG AMQ28_05735 IPR004568 Phosphopantetheine-protein transferase domain AMQ28_05735 IPR037143 4'-phosphopantetheinyl transferase domain superfamily AMQ28_05735 IPR008278 4'-phosphopantetheinyl transferase domain AMQ28_05740 IPR016484 GTP-binding protein EngA AMQ28_05740 IPR005225 Small GTP-binding protein domain AMQ28_05740 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_05740 IPR015946 K homology domain-like, alpha/beta AMQ28_05740 IPR032859 GTPase Der, C-terminal KH-domain-like AMQ28_05740 IPR006073 GTP binding domain AMQ28_05740 IPR031166 EngA-type guanine nucleotide-binding (G) domain AMQ28_05745 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMQ28_05745 IPR017687 Outer membrane protein assembly factor BamB AMQ28_05745 IPR002372 Pyrrolo-quinoline quinone repeat AMQ28_05745 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AMQ28_05745 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMQ28_05755 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit AMQ28_05755 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain AMQ28_05755 IPR015807 Histidine-tRNA ligase AMQ28_05755 IPR036621 Anticodon-binding domain superfamily AMQ28_05755 IPR004154 Anticodon-binding AMQ28_05755 IPR006195 Aminoacyl-tRNA synthetase, class II AMQ28_05760 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type AMQ28_05760 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial AMQ28_05760 IPR036849 Enolase-like, C-terminal domain superfamily AMQ28_05760 IPR011005 Dihydropteroate synthase-like AMQ28_05765 IPR025194 Domain of unknown function DUF4115 AMQ28_05765 IPR001387 Cro/C1-type helix-turn-helix domain AMQ28_05765 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMQ28_05775 IPR013785 Aldolase-type TIM barrel AMQ28_05775 IPR040072 Methyltransferase (Class A) AMQ28_05775 IPR007197 Radical SAM AMQ28_05775 IPR027492 Dual-specificity RNA methyltransferase RlmN AMQ28_05775 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr AMQ28_05780 IPR034907 Nucleoside diphosphate kinase-like domain AMQ28_05780 IPR036850 Nucleoside diphosphate kinase-like domain superfamily AMQ28_05780 IPR001564 Nucleoside diphosphate kinase AMQ28_05780 IPR023005 Nucleoside diphosphate kinase, active site AMQ28_05785 IPR036762 IscX-like superfamily AMQ28_05785 IPR007479 ISC system FeS cluster assembly, IscX AMQ28_05790 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMQ28_05790 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMQ28_05795 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMQ28_05795 IPR001296 Glycosyl transferase, family 1 AMQ28_05825 IPR013023 Ketol-acid reductoisomerase AMQ28_05825 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMQ28_05825 IPR000506 Ketol-acid reductoisomerase, C-terminal AMQ28_05825 IPR013116 Ketol-acid reductoisomerase, N-terminal AMQ28_05825 IPR014359 Ketol-acid reductoisomerase, prokaryotic AMQ28_05825 IPR036291 NAD(P)-binding domain superfamily AMQ28_05830 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AMQ28_05830 IPR019455 Acetolactate synthase, small subunit, C-terminal AMQ28_05830 IPR002912 ACT domain AMQ28_05830 IPR039557 AHAS, ACT domain AMQ28_05830 IPR004789 Acetolactate synthase, small subunit AMQ28_05835 IPR012846 Acetolactate synthase, large subunit, biosynthetic AMQ28_05835 IPR039368 Acetolactate synthase large subunit, TPP binding domain AMQ28_05835 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMQ28_05835 IPR012000 Thiamine pyrophosphate enzyme, central domain AMQ28_05835 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMQ28_05835 IPR000399 TPP-binding enzyme, conserved site AMQ28_05835 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMQ28_05835 IPR029061 Thiamin diphosphate-binding fold AMQ28_05845 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AMQ28_05845 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMQ28_05845 IPR025709 Leucyl-tRNA synthetase, editing domain AMQ28_05845 IPR002302 Leucine-tRNA ligase AMQ28_05845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_05845 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMQ28_05845 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AMQ28_05845 IPR002300 Aminoacyl-tRNA synthetase, class Ia AMQ28_05845 IPR015413 Methionyl/Leucyl tRNA synthetase AMQ28_05860 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMQ28_05860 IPR006143 RND efflux pump, membrane fusion protein AMQ28_05860 IPR030190 Macrolide export protein MacA AMQ28_05865 IPR017871 ABC transporter, conserved site AMQ28_05865 IPR003439 ABC transporter-like AMQ28_05865 IPR003838 ABC transporter permease protein domain AMQ28_05865 IPR017911 ABC transporter, macrolide export, ATP-binding domain AMQ28_05865 IPR025857 MacB-like periplasmic core domain AMQ28_05865 IPR003593 AAA+ ATPase domain AMQ28_05865 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_05870 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AMQ28_05870 IPR003423 Outer membrane efflux protein AMQ28_05880 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain AMQ28_05880 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily AMQ28_05880 IPR000398 Thymidylate synthase AMQ28_05880 IPR020940 Thymidylate synthase, active site AMQ28_05885 IPR001796 Dihydrofolate reductase domain AMQ28_05885 IPR012259 Dihydrofolate reductase AMQ28_05885 IPR024072 Dihydrofolate reductase-like domain superfamily AMQ28_05885 IPR017925 Dihydrofolate reductase conserved site AMQ28_05900 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily AMQ28_05900 IPR002569 Peptide methionine sulphoxide reductase MsrA AMQ28_05910 IPR002898 MotA/TolQ/ExbB proton channel AMQ28_05920 IPR036477 Formyl transferase, N-terminal domain superfamily AMQ28_05920 IPR004810 Formyltetrahydrofolate deformylase AMQ28_05920 IPR002912 ACT domain AMQ28_05920 IPR002376 Formyl transferase, N-terminal AMQ28_05920 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain AMQ28_05925 IPR009057 Homeobox-like domain superfamily AMQ28_05925 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMQ28_05925 IPR013571 Transcription regulator QacR, C-terminal AMQ28_05925 IPR001647 DNA-binding HTH domain, TetR-type AMQ28_05925 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMQ28_05930 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent AMQ28_05930 IPR016161 Aldehyde/histidinol dehydrogenase AMQ28_05930 IPR016162 Aldehyde dehydrogenase, N-terminal AMQ28_05930 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMQ28_05930 IPR016163 Aldehyde dehydrogenase, C-terminal AMQ28_05930 IPR015590 Aldehyde dehydrogenase domain AMQ28_05935 IPR034704 L28p-like AMQ28_05935 IPR026569 Ribosomal protein L28/L24 AMQ28_05935 IPR037147 Ribosomal protein L28/L24 superfamily AMQ28_05935 IPR001383 Ribosomal protein L28 AMQ28_05940 IPR011332 Zinc-binding ribosomal protein AMQ28_05940 IPR018264 Ribosomal protein L33, conserved site AMQ28_05940 IPR001705 Ribosomal protein L33 AMQ28_05940 IPR038584 Ribosomal protein L33 superfamily AMQ28_05945 IPR004771 K+/H+ exchanger AMQ28_05945 IPR038770 Sodium/solute symporter superfamily AMQ28_05945 IPR036291 NAD(P)-binding domain superfamily AMQ28_05945 IPR003148 Regulator of K+ conductance, N-terminal AMQ28_05945 IPR006153 Cation/H+ exchanger AMQ28_05970 IPR005751 ATP-dependent DNA helicase PcrA AMQ28_05970 IPR013986 DExx box DNA helicase domain superfamily AMQ28_05970 IPR014017 UvrD-like DNA helicase, C-terminal AMQ28_05970 IPR000212 DNA helicase, UvrD/REP type AMQ28_05970 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_05970 IPR014016 UvrD-like helicase, ATP-binding domain AMQ28_05970 IPR034739 UvrD/AddA helicase, N-terminal AMQ28_05975 IPR018197 Glycerate kinase, restriction-enzyme-like fold AMQ28_05975 IPR036129 Glycerate kinase superfamily AMQ28_05975 IPR004381 Glycerate kinase AMQ28_05975 IPR018193 Glycerate kinase, flavodoxin-like fold AMQ28_05990 IPR000380 DNA topoisomerase, type IA AMQ28_05990 IPR003602 DNA topoisomerase, type IA, DNA-binding domain AMQ28_05990 IPR023406 DNA topoisomerase, type IA, active site AMQ28_05990 IPR034149 DNA topoisomerase 1, TOPRIM domain AMQ28_05990 IPR006171 TOPRIM domain AMQ28_05990 IPR028612 DNA topoisomerase I, type IA AMQ28_05990 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type AMQ28_05990 IPR005733 DNA topoisomerase I, bacterial-type AMQ28_05990 IPR013498 DNA topoisomerase, type IA, zn finger AMQ28_05990 IPR003601 DNA topoisomerase, type IA, domain 2 AMQ28_05990 IPR023405 DNA topoisomerase, type IA, core domain AMQ28_05990 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMQ28_05990 IPR013497 DNA topoisomerase, type IA, central AMQ28_05990 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AMQ28_05990 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMQ28_06005 IPR007236 SlyX AMQ28_06015 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase AMQ28_06015 IPR004960 Bacterial lipid A biosynthesis acyltransferase AMQ28_06030 IPR012080 Aspartate-semialdehyde dehydrogenase AMQ28_06030 IPR036291 NAD(P)-binding domain superfamily AMQ28_06030 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site AMQ28_06030 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type AMQ28_06030 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AMQ28_06030 IPR000534 Semialdehyde dehydrogenase, NAD-binding AMQ28_06050 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMQ28_06050 IPR001406 Pseudouridine synthase I, TruA AMQ28_06050 IPR020095 Pseudouridine synthase I, TruA, C-terminal AMQ28_06050 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain AMQ28_06060 IPR006196 RNA-binding domain, S1, IF1 type AMQ28_06060 IPR022967 RNA-binding domain, S1 AMQ28_06060 IPR004368 Translation initiation factor IF-1 AMQ28_06060 IPR012340 Nucleic acid-binding, OB-fold AMQ28_06075 IPR004429 Isopropylmalate dehydrogenase AMQ28_06075 IPR024084 Isopropylmalate dehydrogenase-like domain AMQ28_06075 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AMQ28_06085 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMQ28_06085 IPR004431 3-isopropylmalate dehydratase, small subunit AMQ28_06085 IPR033940 3-isopropylmalate dehydratase, swivel domain AMQ28_06085 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AMQ28_06090 IPR004430 3-isopropylmalate dehydratase, large subunit AMQ28_06090 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AMQ28_06090 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AMQ28_06090 IPR018136 Aconitase family, 4Fe-4S cluster binding site AMQ28_06090 IPR033941 3-Isopropylmalate dehydratase, catalytic domain AMQ28_06090 IPR036008 Aconitase, iron-sulfur domain AMQ28_06105 IPR000847 Transcription regulator HTH, LysR AMQ28_06105 IPR005119 LysR, substrate-binding AMQ28_06105 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_06105 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_06115 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site AMQ28_06115 IPR001525 C-5 cytosine methyltransferase AMQ28_06115 IPR018117 DNA methylase, C-5 cytosine-specific, active site AMQ28_06115 IPR001387 Cro/C1-type helix-turn-helix domain AMQ28_06115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_06115 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMQ28_06120 IPR011006 CheY-like superfamily AMQ28_06120 IPR000792 Transcription regulator LuxR, C-terminal AMQ28_06120 IPR001789 Signal transduction response regulator, receiver domain AMQ28_06120 IPR016032 Signal transduction response regulator, C-terminal effector AMQ28_06120 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_06135 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AMQ28_06135 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AMQ28_06145 IPR036397 Ribonuclease H superfamily AMQ28_06145 IPR001584 Integrase, catalytic core AMQ28_06145 IPR025948 HTH-like domain AMQ28_06145 IPR012337 Ribonuclease H-like superfamily AMQ28_06150 IPR036397 Ribonuclease H superfamily AMQ28_06150 IPR012337 Ribonuclease H-like superfamily AMQ28_06150 IPR001584 Integrase, catalytic core AMQ28_06150 IPR009057 Homeobox-like domain superfamily AMQ28_06160 IPR001207 Transposase, mutator type AMQ28_06175 IPR001584 Integrase, catalytic core AMQ28_06175 IPR025246 Transposase IS30-like HTH domain AMQ28_06175 IPR001598 Transposase, IS30, conserved site AMQ28_06175 IPR036397 Ribonuclease H superfamily AMQ28_06175 IPR012337 Ribonuclease H-like superfamily AMQ28_06190 IPR020476 NUDIX hydrolase AMQ28_06190 IPR020084 NUDIX hydrolase, conserved site AMQ28_06190 IPR000086 NUDIX hydrolase domain AMQ28_06190 IPR022927 RNA pyrophosphohydrolase RppH AMQ28_06190 IPR015797 NUDIX hydrolase-like domain superfamily AMQ28_06195 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMQ28_06195 IPR036618 PtsI, HPr-binding domain superfamily AMQ28_06195 IPR018274 PEP-utilising enzyme, active site AMQ28_06195 IPR006318 Phosphotransferase system, enzyme I-like AMQ28_06195 IPR023151 PEP-utilising enzyme, conserved site AMQ28_06195 IPR000121 PEP-utilising enzyme, C-terminal AMQ28_06195 IPR008731 Phosphotransferase system, enzyme I N-terminal AMQ28_06195 IPR036637 Phosphohistidine domain superfamily AMQ28_06195 IPR040442 Pyruvate kinase-like domain superfamily AMQ28_06195 IPR003018 GAF domain AMQ28_06195 IPR029016 GAF-like domain superfamily AMQ28_06195 IPR008279 PEP-utilising enzyme, mobile domain AMQ28_06205 IPR034184 Putative acyl-CoA dehydrogenase AidB AMQ28_06205 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMQ28_06205 IPR006089 Acyl-CoA dehydrogenase, conserved site AMQ28_06205 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMQ28_06205 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMQ28_06205 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMQ28_06205 IPR041504 Adaptive response protein AidB, N-terminal AMQ28_06215 IPR020835 Catalase superfamily AMQ28_06215 IPR010582 Catalase immune-responsive domain AMQ28_06215 IPR002226 Catalase haem-binding site AMQ28_06215 IPR037060 Catalase core domain superfamily AMQ28_06215 IPR011614 Catalase core domain AMQ28_06215 IPR024708 Catalase active site AMQ28_06215 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 AMQ28_06215 IPR018028 Catalase, mono-functional, haem-containing AMQ28_06215 IPR040333 Catalase, clade 3 AMQ28_06220 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMQ28_06220 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D AMQ28_06220 IPR001279 Metallo-beta-lactamase AMQ28_06230 IPR005119 LysR, substrate-binding AMQ28_06230 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_06230 IPR000847 Transcription regulator HTH, LysR AMQ28_06230 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_06240 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AMQ28_06240 IPR002942 RNA-binding S4 domain AMQ28_06240 IPR036986 RNA-binding S4 domain superfamily AMQ28_06240 IPR006145 Pseudouridine synthase, RsuA/RluA AMQ28_06240 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMQ28_06240 IPR006225 Pseudouridine synthase, RluC/RluD AMQ28_06245 IPR003029 S1 domain AMQ28_06245 IPR022967 RNA-binding domain, S1 AMQ28_06245 IPR012340 Nucleic acid-binding, OB-fold AMQ28_06245 IPR021968 Polyribonucleotide phosphorylase C-terminal AMQ28_06245 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AMQ28_06245 IPR028878 Ribonuclease E AMQ28_06245 IPR004659 Ribonuclease E/G AMQ28_06250 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 AMQ28_06250 IPR020845 AMP-binding, conserved site AMQ28_06250 IPR000873 AMP-dependent synthetase/ligase AMQ28_06250 IPR042099 AMP-dependent synthetase-like superfamily AMQ28_06250 IPR025110 AMP-binding enzyme, C-terminal domain AMQ28_06275 IPR007168 Phage shock protein, PspC, N-terminal AMQ28_06285 IPR006194 Glycine-tRNA synthetase, heterodimeric AMQ28_06285 IPR002310 Glycine-tRNA ligase, alpha subunit AMQ28_06290 IPR015944 Glycine-tRNA ligase, beta subunit AMQ28_06290 IPR008909 DALR anticodon binding AMQ28_06290 IPR006194 Glycine-tRNA synthetase, heterodimeric AMQ28_06315 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMQ28_06315 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMQ28_06315 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMQ28_06315 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMQ28_06315 IPR036291 NAD(P)-binding domain superfamily AMQ28_06345 IPR009051 Alpha-helical ferredoxin AMQ28_06345 IPR023753 FAD/NAD(P)-binding domain AMQ28_06345 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_06345 IPR028261 Dihydroprymidine dehydrogenase domain II AMQ28_06355 IPR005584 DNA gyrase inhibitor YacG AMQ28_06355 IPR013088 Zinc finger, NHR/GATA-type AMQ28_06360 IPR001279 Metallo-beta-lactamase AMQ28_06360 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMQ28_06365 IPR001015 Ferrochelatase AMQ28_06365 IPR019772 Ferrochelatase, active site AMQ28_06365 IPR033659 Ferrochelatase, N-terminal AMQ28_06365 IPR033644 Ferrochelatase, C-terminal AMQ28_06375 IPR018187 Asp/Glu racemase, active site 1 AMQ28_06375 IPR001920 Asp/Glu racemase AMQ28_06375 IPR015942 Asp/Glu/hydantoin racemase AMQ28_06375 IPR004391 Glutamate racemase AMQ28_06375 IPR033134 Asp/Glu racemase, active site 2 AMQ28_06385 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMQ28_06385 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase AMQ28_06385 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_06395 IPR022931 Sulfur carrier protein TusA AMQ28_06395 IPR001455 TusA-like domain AMQ28_06395 IPR036868 TusA-like domain superfamily AMQ28_06400 IPR005170 Transporter-associated domain AMQ28_06400 IPR000644 CBS domain AMQ28_06400 IPR036318 FAD-binding, type PCMH-like superfamily AMQ28_06400 IPR016169 FAD-binding, type PCMH, subdomain 2 AMQ28_06405 IPR036526 Carbon-nitrogen hydrolase superfamily AMQ28_06405 IPR003010 Carbon-nitrogen hydrolase AMQ28_06405 IPR004563 Apolipoprotein N-acyltransferase AMQ28_06415 IPR010054 General secretion pathway protein G AMQ28_06415 IPR000983 Bacterial general secretion pathway protein G-type pilin AMQ28_06415 IPR012902 Prokaryotic N-terminal methylation site AMQ28_06415 IPR013545 Type II secretion system protein G AMQ28_06420 IPR042094 Type II secretion system F domain superfamily AMQ28_06420 IPR018076 Type II secretion system F domain AMQ28_06420 IPR001992 Type II secretion system conserved site AMQ28_06420 IPR011850 General secretion pathway protein F AMQ28_06420 IPR003004 GspF/PilC family AMQ28_06425 IPR001650 Helicase, C-terminal AMQ28_06425 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_06425 IPR005259 Primosomal protein N' AMQ28_06425 IPR011545 DEAD/DEAH box helicase domain AMQ28_06425 IPR041236 Primosomal protein N, C-terminal domain AMQ28_06425 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMQ28_06425 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily AMQ28_06425 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain AMQ28_06425 IPR041222 Primosomal protein N', 3' DNA-binding domain AMQ28_06430 IPR006153 Cation/H+ exchanger AMQ28_06430 IPR036291 NAD(P)-binding domain superfamily AMQ28_06430 IPR004771 K+/H+ exchanger AMQ28_06430 IPR020884 Glutathione-regulated potassium-efflux system protein KefB AMQ28_06430 IPR038770 Sodium/solute symporter superfamily AMQ28_06430 IPR003148 Regulator of K+ conductance, N-terminal AMQ28_06435 IPR016153 Heat shock protein Hsp33, N-terminal AMQ28_06435 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily AMQ28_06435 IPR016154 Heat shock protein Hsp33, C-terminal AMQ28_06435 IPR000397 Heat shock protein Hsp33 AMQ28_06440 IPR003018 GAF domain AMQ28_06440 IPR000160 GGDEF domain AMQ28_06440 IPR029787 Nucleotide cyclase AMQ28_06440 IPR029016 GAF-like domain superfamily AMQ28_06445 IPR001623 DnaJ domain AMQ28_06445 IPR002939 Chaperone DnaJ, C-terminal AMQ28_06445 IPR008971 HSP40/DnaJ peptide-binding AMQ28_06445 IPR023859 DNA-binding protein, curved-DNA AMQ28_06445 IPR018253 DnaJ domain, conserved site AMQ28_06445 IPR036869 Chaperone J-domain superfamily AMQ28_06450 IPR022835 Chaperone modulatory protein CbpM AMQ28_06460 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB AMQ28_06460 IPR004488 Magnesium/cobalt transport protein CorA AMQ28_06465 IPR004087 K Homology domain AMQ28_06465 IPR012340 Nucleic acid-binding, OB-fold AMQ28_06465 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_06465 IPR004088 K Homology domain, type 1 AMQ28_06465 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain AMQ28_06465 IPR027408 PNPase/RNase PH domain superfamily AMQ28_06465 IPR022967 RNA-binding domain, S1 AMQ28_06465 IPR003029 S1 domain AMQ28_06465 IPR036345 Exoribonuclease, PH domain 2 superfamily AMQ28_06465 IPR036612 K Homology domain, type 1 superfamily AMQ28_06465 IPR015847 Exoribonuclease, phosphorolytic domain 2 AMQ28_06465 IPR012162 Polyribonucleotide nucleotidyltransferase AMQ28_06465 IPR001247 Exoribonuclease, phosphorolytic domain 1 AMQ28_06470 IPR005290 Ribosomal protein S15, bacterial-type AMQ28_06470 IPR009068 S15/NS1, RNA-binding AMQ28_06470 IPR000589 Ribosomal protein S15 AMQ28_06480 IPR006344 RecBCD enzyme subunit RecD AMQ28_06480 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain AMQ28_06480 IPR027785 UvrD-like helicase C-terminal domain AMQ28_06480 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_06480 IPR003593 AAA+ ATPase domain AMQ28_06485 IPR000212 DNA helicase, UvrD/REP type AMQ28_06485 IPR014017 UvrD-like DNA helicase, C-terminal AMQ28_06485 IPR014016 UvrD-like helicase, ATP-binding domain AMQ28_06485 IPR011335 Restriction endonuclease type II-like AMQ28_06485 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AMQ28_06485 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_06485 IPR011604 Exonuclease, phage-type/RecB, C-terminal AMQ28_06485 IPR034739 UvrD/AddA helicase, N-terminal AMQ28_06485 IPR004586 RecBCD enzyme subunit RecB AMQ28_06490 IPR041500 RecC, C-terminal AMQ28_06490 IPR011335 Restriction endonuclease type II-like AMQ28_06490 IPR013986 DExx box DNA helicase domain superfamily AMQ28_06490 IPR006697 RecBCD enzyme subunit RecC AMQ28_06490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_06500 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_06500 IPR022488 Polyphosphate kinase-2-related AMQ28_06510 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMQ28_06510 IPR004033 UbiE/COQ5 methyltransferase AMQ28_06510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_06520 IPR011009 Protein kinase-like domain superfamily AMQ28_06520 IPR010232 Probable protein kinase UbiB AMQ28_06520 IPR004147 UbiB domain AMQ28_06530 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily AMQ28_06530 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain AMQ28_06530 IPR026660 Phosphoribosyl-AMP cyclohydrolase AMQ28_06540 IPR005281 Monovalent cation:proton antiporter, subunit B AMQ28_06540 IPR025383 Domain of unknown function DUF4040 AMQ28_06540 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AMQ28_06540 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AMQ28_06540 IPR005663 Monovalent cation proton antiporter subunit A AMQ28_06540 IPR007182 Na+/H+ antiporter MnhB subunit-related protein AMQ28_06545 IPR006673 Mnh complex subunit C1 AMQ28_06545 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AMQ28_06550 IPR004775 Na(+)/H(+) antiporter subunit D1 AMQ28_06550 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AMQ28_06560 IPR007208 Na(+)/H(+) antiporter subunit F-like AMQ28_06570 IPR023799 Ribosome-binding factor A domain superfamily AMQ28_06570 IPR000238 Ribosome-binding factor A AMQ28_06570 IPR015946 K homology domain-like, alpha/beta AMQ28_06575 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_06575 IPR000795 Transcription factor, GTP-binding domain AMQ28_06575 IPR005225 Small GTP-binding protein domain AMQ28_06575 IPR009061 Putative DNA-binding domain superfamily AMQ28_06575 IPR006847 Translation initiation factor IF-2, N-terminal AMQ28_06575 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AMQ28_06575 IPR023115 Translation initiation factor IF- 2, domain 3 AMQ28_06575 IPR015760 Translation initiation factor IF- 2 AMQ28_06575 IPR009000 Translation protein, beta-barrel domain superfamily AMQ28_06575 IPR000178 Translation initiation factor aIF-2, bacterial-like AMQ28_06575 IPR013575 Initiation factor 2 associated domain, bacterial AMQ28_06580 IPR003029 S1 domain AMQ28_06580 IPR022967 RNA-binding domain, S1 AMQ28_06580 IPR036555 NusA, N-terminal domain superfamily AMQ28_06580 IPR030842 Transcription termination/antitermination protein NusA, bacterial AMQ28_06580 IPR012340 Nucleic acid-binding, OB-fold AMQ28_06580 IPR009019 K homology domain superfamily, prokaryotic type AMQ28_06580 IPR010213 Transcription termination factor NusA AMQ28_06580 IPR015946 K homology domain-like, alpha/beta AMQ28_06580 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical AMQ28_06580 IPR013735 Transcription factor NusA, N-terminal AMQ28_06580 IPR010214 Transcription termination factor NusA, C-terminal duplication AMQ28_06580 IPR025249 KH domain, NusA-like AMQ28_06585 IPR035956 RimP, N-terminal domain superfamily AMQ28_06585 IPR028998 Ribosome maturation factor RimP, C-terminal AMQ28_06585 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily AMQ28_06585 IPR003728 Ribosome maturation factor RimP AMQ28_06585 IPR028989 Ribosome maturation factor RimP, N-terminal AMQ28_06610 IPR004692 Preprotein translocase SecG subunit AMQ28_06615 IPR035990 Triosephosphate isomerase superfamily AMQ28_06615 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic AMQ28_06615 IPR013785 Aldolase-type TIM barrel AMQ28_06615 IPR000652 Triosephosphate isomerase AMQ28_06615 IPR020861 Triosephosphate isomerase, active site AMQ28_06620 IPR042181 Type II secretion system, protein E, N-terminal AMQ28_06620 IPR007831 General secretory system II, protein E, N-terminal AMQ28_06620 IPR013374 ATPase, type IV, pilus assembly, PilB AMQ28_06620 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_06620 IPR037257 General secretory system II, protein E, N-terminal superfamily AMQ28_06620 IPR001482 Type II/IV secretion system protein AMQ28_06625 IPR001992 Type II secretion system conserved site AMQ28_06625 IPR018076 Type II secretion system F domain AMQ28_06625 IPR042094 Type II secretion system F domain superfamily AMQ28_06625 IPR003004 GspF/PilC family AMQ28_06630 IPR014032 Peptidase A24A, prepilin type IV, bacterial AMQ28_06630 IPR000045 Prepilin type IV endopeptidase, peptidase domain AMQ28_06630 IPR010627 Peptidase A24A, N-terminal AMQ28_06635 IPR001977 Dephospho-CoA kinase AMQ28_06635 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_06645 IPR029028 Alpha/beta knot methyltransferases AMQ28_06645 IPR029064 50S ribosomal protein L30e-like AMQ28_06645 IPR004441 RNA methyltransferase TrmH family AMQ28_06645 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMQ28_06645 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMQ28_06645 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AMQ28_06645 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AMQ28_06650 IPR011051 RmlC-like cupin domain superfamily AMQ28_06650 IPR014710 RmlC-like jelly roll fold AMQ28_06650 IPR009664 Pyrimidine/purine nucleoside phosphorylase AMQ28_06655 IPR003395 RecF/RecN/SMC, N-terminal AMQ28_06655 IPR004604 DNA recombination/repair protein RecN AMQ28_06655 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_06660 IPR003774 Protein of unknown function UPF0301 AMQ28_06665 IPR037027 YqgF/RNase H-like domain superfamily AMQ28_06665 IPR006641 YqgF/RNase H-like domain AMQ28_06665 IPR012337 Ribonuclease H-like superfamily AMQ28_06665 IPR005227 Putative pre-16S rRNA nuclease AMQ28_06670 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA AMQ28_06670 IPR006143 RND efflux pump, membrane fusion protein AMQ28_06670 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMQ28_06680 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein AMQ28_06680 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB AMQ28_06695 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_06695 IPR017871 ABC transporter, conserved site AMQ28_06695 IPR011527 ABC transporter type 1, transmembrane domain AMQ28_06695 IPR003439 ABC transporter-like AMQ28_06695 IPR003593 AAA+ ATPase domain AMQ28_06695 IPR039421 Type I protein exporter AMQ28_06695 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMQ28_06700 IPR026022 PhoU domain AMQ28_06700 IPR038078 PhoU-like domain superfamily AMQ28_06700 IPR028366 Phosphate transport system protein PhoU AMQ28_06705 IPR010130 Type I secretion outer membrane protein, TolC AMQ28_06705 IPR003423 Outer membrane efflux protein AMQ28_06715 IPR038521 ThiC/Bza superfamily AMQ28_06715 IPR025747 ThiC-associated domain AMQ28_06715 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B AMQ28_06715 IPR037509 Phosphomethylpyrimidine synthase AMQ28_06720 IPR000086 NUDIX hydrolase domain AMQ28_06720 IPR020084 NUDIX hydrolase, conserved site AMQ28_06720 IPR015797 NUDIX hydrolase-like domain superfamily AMQ28_06720 IPR004385 Nucleoside diphosphate pyrophosphatase AMQ28_06725 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA AMQ28_06725 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMQ28_06725 IPR029052 Metallo-dependent phosphatase-like AMQ28_06730 IPR037187 DksA, N-terminal domain superfamily AMQ28_06730 IPR012784 RNA polymerase-binding transcription factor DksA AMQ28_06730 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AMQ28_06730 IPR000962 Zinc finger, DksA/TraR C4-type AMQ28_06730 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMQ28_06735 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AMQ28_06735 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AMQ28_06735 IPR022380 Glutamyl-Q tRNA(Asp) synthetase AMQ28_06735 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_06740 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA AMQ28_06740 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site AMQ28_06740 IPR013437 Probable peptidoglycan glycosyltransferase FtsW AMQ28_06745 IPR004101 Mur ligase, C-terminal AMQ28_06745 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase AMQ28_06745 IPR036565 Mur-like, catalytic domain superfamily AMQ28_06745 IPR036615 Mur ligase, C-terminal domain superfamily AMQ28_06745 IPR013221 Mur ligase, central AMQ28_06755 IPR030389 FeoB-type guanine nucleotide-binding (G) domain AMQ28_06755 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_06755 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain AMQ28_06755 IPR003373 Ferrous iron transport protein B AMQ28_06755 IPR011640 Ferrous iron transport protein B, C-terminal AMQ28_06755 IPR006073 GTP binding domain AMQ28_06765 IPR023009 Tyrosine recombinase XerC/XerD AMQ28_06765 IPR004107 Integrase, SAM-like, N-terminal AMQ28_06765 IPR010998 Integrase/recombinase, N-terminal AMQ28_06765 IPR002104 Integrase, catalytic domain AMQ28_06765 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMQ28_06765 IPR013762 Integrase-like, catalytic domain superfamily AMQ28_06765 IPR011932 Tyrosine recombinase XerD AMQ28_06770 IPR012336 Thioredoxin-like fold AMQ28_06770 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AMQ28_06770 IPR017937 Thioredoxin, conserved site AMQ28_06770 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily AMQ28_06770 IPR013766 Thioredoxin domain AMQ28_06770 IPR033954 Disulphide bond isomerase, DsbC/G AMQ28_06770 IPR036249 Thioredoxin-like superfamily AMQ28_06775 IPR002912 ACT domain AMQ28_06775 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AMQ28_06775 IPR016204 Homoserine dehydrogenase AMQ28_06775 IPR001342 Homoserine dehydrogenase, catalytic AMQ28_06775 IPR019811 Homoserine dehydrogenase, conserved site AMQ28_06775 IPR036291 NAD(P)-binding domain superfamily AMQ28_06780 IPR001926 Pyridoxal-phosphate dependent enzyme AMQ28_06780 IPR026260 Threonine synthase, bacterial/archaeal AMQ28_06780 IPR004450 Threonine synthase-like AMQ28_06780 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMQ28_06780 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AMQ28_06785 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AMQ28_06785 IPR012338 Beta-lactamase/transpeptidase-like AMQ28_06785 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AMQ28_06790 IPR011006 CheY-like superfamily AMQ28_06790 IPR016032 Signal transduction response regulator, C-terminal effector AMQ28_06790 IPR000792 Transcription regulator LuxR, C-terminal AMQ28_06790 IPR001789 Signal transduction response regulator, receiver domain AMQ28_06795 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_06795 IPR005467 Histidine kinase domain AMQ28_06795 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_06795 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMQ28_06795 IPR000014 PAS domain AMQ28_06795 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMQ28_06795 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMQ28_06800 IPR001789 Signal transduction response regulator, receiver domain AMQ28_06800 IPR002078 RNA polymerase sigma factor 54 interaction domain AMQ28_06800 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMQ28_06800 IPR011006 CheY-like superfamily AMQ28_06800 IPR009057 Homeobox-like domain superfamily AMQ28_06800 IPR002197 DNA binding HTH domain, Fis-type AMQ28_06800 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_06800 IPR025944 Sigma-54 interaction domain, conserved site AMQ28_06800 IPR003593 AAA+ ATPase domain AMQ28_06800 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMQ28_06805 IPR029045 ClpP/crotonase-like domain superfamily AMQ28_06805 IPR036034 PDZ superfamily AMQ28_06805 IPR001478 PDZ domain AMQ28_06805 IPR004447 C-terminal-processing peptidase S41A AMQ28_06805 IPR005151 Tail specific protease AMQ28_06810 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily AMQ28_06810 IPR011258 BPG-independent PGAM, N-terminal AMQ28_06810 IPR017850 Alkaline-phosphatase-like, core domain superfamily AMQ28_06810 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent AMQ28_06810 IPR006124 Metalloenzyme AMQ28_06815 IPR030923 LPS export ABC transporter permease LptG AMQ28_06815 IPR005495 Permease LptG/LptF-related AMQ28_06820 IPR030922 LPS export ABC transporter permease LptF AMQ28_06820 IPR005495 Permease LptG/LptF-related AMQ28_06825 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B AMQ28_06825 IPR023042 Peptidase M17, leucine aminopeptidase AMQ28_06825 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal AMQ28_06825 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal AMQ28_06845 IPR032818 DedA family AMQ28_06845 IPR032816 SNARE associated Golgi protein AMQ28_06850 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily AMQ28_06850 IPR017938 Riboflavin synthase-like beta-barrel AMQ28_06850 IPR026017 Lumazine-binding domain AMQ28_06850 IPR001783 Lumazine-binding protein AMQ28_06860 IPR016192 APOBEC/CMP deaminase, zinc-binding AMQ28_06860 IPR024072 Dihydrofolate reductase-like domain superfamily AMQ28_06860 IPR004794 Riboflavin biosynthesis protein RibD AMQ28_06860 IPR011549 Riboflavin-specific deaminase, C-terminal AMQ28_06860 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal AMQ28_06860 IPR002125 Cytidine and deoxycytidylate deaminase domain AMQ28_06860 IPR016193 Cytidine deaminase-like AMQ28_06865 IPR005144 ATP-cone domain AMQ28_06865 IPR003796 Ribonucleotide reductase regulator NrdR-like AMQ28_06870 IPR018047 Ammonium transporter, conserved site AMQ28_06870 IPR029020 Ammonium/urea transporter AMQ28_06870 IPR001905 Ammonium transporter AMQ28_06870 IPR024041 Ammonium transporter AmtB-like domain AMQ28_06875 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMQ28_06875 IPR002187 Nitrogen regulatory protein PII AMQ28_06875 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMQ28_06875 IPR017918 Nitrogen regulatory protein PII, conserved site AMQ28_06875 IPR002332 Nitrogen regulatory protein P-II, urydylation site AMQ28_06885 IPR025158 Mg chelatase-related protein, C-terminal domain AMQ28_06885 IPR000523 Magnesium chelatase ChlI domain AMQ28_06885 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_06885 IPR003593 AAA+ ATPase domain AMQ28_06885 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_06885 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMQ28_06885 IPR004482 Mg chelatase-related protein AMQ28_06885 IPR001208 MCM domain AMQ28_06900 IPR005318 Outer membrane porin, bacterial AMQ28_06900 IPR023614 Porin domain superfamily AMQ28_06905 IPR008162 Inorganic pyrophosphatase AMQ28_06905 IPR036649 Inorganic pyrophosphatase superfamily AMQ28_06920 IPR020845 AMP-binding, conserved site AMQ28_06920 IPR042099 AMP-dependent synthetase-like superfamily AMQ28_06920 IPR000873 AMP-dependent synthetase/ligase AMQ28_06920 IPR025110 AMP-binding enzyme, C-terminal domain AMQ28_06925 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat AMQ28_06925 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative AMQ28_06925 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AMQ28_06925 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AMQ28_06925 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AMQ28_06925 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMQ28_06925 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily AMQ28_06930 IPR005829 Sugar transporter, conserved site AMQ28_06930 IPR036259 MFS transporter superfamily AMQ28_06930 IPR020846 Major facilitator superfamily domain AMQ28_06930 IPR011701 Major facilitator superfamily AMQ28_06935 IPR005115 Uncharacterised domain UPF0126 AMQ28_06940 IPR023006 Uncharacterised protein family UPF0225 AMQ28_06940 IPR004027 SEC-C motif AMQ28_06940 IPR032710 NTF2-like domain superfamily AMQ28_06945 IPR000644 CBS domain AMQ28_06945 IPR005170 Transporter-associated domain AMQ28_06945 IPR005496 Integral membrane protein TerC AMQ28_06945 IPR016169 FAD-binding, type PCMH, subdomain 2 AMQ28_06945 IPR036318 FAD-binding, type PCMH-like superfamily AMQ28_06950 IPR031100 LOG family AMQ28_06950 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AMQ28_06965 IPR023721 Multidrug resistance protein MdtD AMQ28_06965 IPR036259 MFS transporter superfamily AMQ28_06965 IPR004638 Drug resistance transporter EmrB-like AMQ28_06965 IPR011701 Major facilitator superfamily AMQ28_06965 IPR020846 Major facilitator superfamily domain AMQ28_06975 IPR001126 UmuC domain AMQ28_06975 IPR024728 DNA polymerase type-Y, HhH motif AMQ28_06975 IPR022880 DNA polymerase IV AMQ28_06975 IPR017961 DNA polymerase, Y-family, little finger domain AMQ28_06975 IPR036775 DNA polymerase, Y-family, little finger domain superfamily AMQ28_06990 IPR022946 Uncharacterised protein family UPF0313 AMQ28_06990 IPR023404 Radical SAM, alpha/beta horseshoe AMQ28_06990 IPR020612 Methylthiotransferase, conserved site AMQ28_06990 IPR006638 Elp3/MiaB/NifB AMQ28_06990 IPR013704 Uncharacterised protein family UPF0313, N-terminal AMQ28_06990 IPR024560 Uncharacterised protein family UPF0313, C-terminal AMQ28_06990 IPR007197 Radical SAM AMQ28_06995 IPR011701 Major facilitator superfamily AMQ28_06995 IPR005829 Sugar transporter, conserved site AMQ28_06995 IPR020846 Major facilitator superfamily domain AMQ28_06995 IPR036259 MFS transporter superfamily AMQ28_07025 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMQ28_07025 IPR009057 Homeobox-like domain superfamily AMQ28_07025 IPR001647 DNA-binding HTH domain, TetR-type AMQ28_07045 IPR023635 Peptide deformylase AMQ28_07045 IPR036821 Peptide deformylase superfamily AMQ28_07055 IPR041614 DprA, winged helix domain AMQ28_07055 IPR003488 DNA recombination-mediator protein A AMQ28_07055 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_07060 IPR023535 Threonylcarbamoyl-AMP synthase AMQ28_07060 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMQ28_07060 IPR006070 YrdC-like domain AMQ28_07065 IPR000620 EamA domain AMQ28_07080 IPR033674 Thioredoxin/glutathione peroxidase BtuE AMQ28_07080 IPR000889 Glutathione peroxidase AMQ28_07080 IPR029759 Glutathione peroxidase active site AMQ28_07080 IPR036249 Thioredoxin-like superfamily AMQ28_07080 IPR029760 Glutathione peroxidase conserved site AMQ28_07090 IPR013149 Alcohol dehydrogenase, C-terminal AMQ28_07090 IPR013154 Alcohol dehydrogenase, N-terminal AMQ28_07090 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMQ28_07090 IPR011032 GroES-like superfamily AMQ28_07090 IPR036291 NAD(P)-binding domain superfamily AMQ28_07090 IPR020843 Polyketide synthase, enoylreductase domain AMQ28_07105 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily AMQ28_07105 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit AMQ28_07105 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal AMQ28_07105 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal AMQ28_07110 IPR005722 ATP synthase, F1 complex, beta subunit AMQ28_07110 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_07110 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AMQ28_07110 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily AMQ28_07110 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AMQ28_07110 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AMQ28_07110 IPR003593 AAA+ ATPase domain AMQ28_07110 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal AMQ28_07115 IPR000131 ATP synthase, F1 complex, gamma subunit AMQ28_07115 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site AMQ28_07115 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily AMQ28_07120 IPR005294 ATP synthase, F1 complex, alpha subunit AMQ28_07120 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain AMQ28_07120 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily AMQ28_07120 IPR000793 ATP synthase, alpha subunit, C-terminal AMQ28_07120 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily AMQ28_07120 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AMQ28_07120 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily AMQ28_07120 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AMQ28_07120 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AMQ28_07120 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_07125 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily AMQ28_07125 IPR020781 ATPase, OSCP/delta subunit, conserved site AMQ28_07125 IPR000711 ATPase, OSCP/delta subunit AMQ28_07130 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast AMQ28_07130 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AMQ28_07130 IPR005864 ATP synthase, F0 complex, subunit b, bacterial AMQ28_07135 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast AMQ28_07135 IPR002379 V-ATPase proteolipid subunit C-like domain AMQ28_07135 IPR035921 F/V-ATP synthase subunit C superfamily AMQ28_07135 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site AMQ28_07135 IPR038662 F1F0 ATP synthase subunit C superfamily AMQ28_07135 IPR000454 ATP synthase, F0 complex, subunit C AMQ28_07140 IPR035908 ATP synthase, F0 complex, subunit A superfamily AMQ28_07140 IPR023011 ATP synthase, F0 complex, subunit A, active site AMQ28_07140 IPR000568 ATP synthase, F0 complex, subunit A AMQ28_07160 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_07160 IPR003593 AAA+ ATPase domain AMQ28_07160 IPR017882 Zinc import ATP-binding protein ZnuC AMQ28_07160 IPR017871 ABC transporter, conserved site AMQ28_07160 IPR003439 ABC transporter-like AMQ28_07165 IPR037294 ABC transporter, BtuC-like AMQ28_07165 IPR001626 ABC transporter, TroCD-like AMQ28_07170 IPR004778 Homoserine/Threonine efflux protein AMQ28_07170 IPR001123 Amino acid exporter protein, LeuE-type AMQ28_07175 IPR011008 Dimeric alpha-beta barrel AMQ28_07175 IPR006314 Dyp-type peroxidase AMQ28_07180 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_07180 IPR004839 Aminotransferase, class I/classII AMQ28_07180 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_07180 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_07185 IPR002528 Multi antimicrobial extrusion protein AMQ28_07200 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMQ28_07200 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_07200 IPR036291 NAD(P)-binding domain superfamily AMQ28_07210 IPR016032 Signal transduction response regulator, C-terminal effector AMQ28_07210 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_07210 IPR039420 Transcriptional regulatory protein WalR-like AMQ28_07210 IPR001789 Signal transduction response regulator, receiver domain AMQ28_07210 IPR011006 CheY-like superfamily AMQ28_07210 IPR001867 OmpR/PhoB-type DNA-binding domain AMQ28_07210 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB AMQ28_07215 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMQ28_07215 IPR013767 PAS fold AMQ28_07215 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR AMQ28_07215 IPR021766 Phosphate regulon sensor protein PhoR AMQ28_07215 IPR035965 PAS domain superfamily AMQ28_07215 IPR000014 PAS domain AMQ28_07215 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMQ28_07215 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMQ28_07215 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_07215 IPR005467 Histidine kinase domain AMQ28_07215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_07225 IPR012093 Pirin AMQ28_07225 IPR008778 Pirin, C-terminal domain AMQ28_07225 IPR011051 RmlC-like cupin domain superfamily AMQ28_07225 IPR014710 RmlC-like jelly roll fold AMQ28_07225 IPR003829 Pirin, N-terminal domain AMQ28_07230 IPR011006 CheY-like superfamily AMQ28_07230 IPR000160 GGDEF domain AMQ28_07230 IPR029787 Nucleotide cyclase AMQ28_07230 IPR001789 Signal transduction response regulator, receiver domain AMQ28_07235 IPR007560 Restriction endonuclease type IV, Mrr AMQ28_07235 IPR011335 Restriction endonuclease type II-like AMQ28_07235 IPR025745 Restriction system protein Mrr-like N-terminal domain AMQ28_07240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_07240 IPR022955 GMP synthase AMQ28_07240 IPR004739 GMP synthase, glutamine amidotransferase AMQ28_07240 IPR025777 GMP synthetase ATP pyrophosphatase domain AMQ28_07240 IPR001674 GMP synthase, C-terminal AMQ28_07240 IPR022310 NAD/GMP synthase AMQ28_07240 IPR029062 Class I glutamine amidotransferase-like AMQ28_07240 IPR017926 Glutamine amidotransferase AMQ28_07250 IPR032808 DoxX family AMQ28_07255 IPR032818 DedA family AMQ28_07255 IPR032816 SNARE associated Golgi protein AMQ28_07270 IPR025669 AAA domain AMQ28_07270 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_07280 IPR002634 BolA protein AMQ28_07280 IPR036065 BolA-like superfamily AMQ28_07315 IPR010781 Protein of unknown function DUF1376 AMQ28_07320 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AMQ28_07320 IPR002611 IstB-like ATP-binding protein AMQ28_07320 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_07320 IPR001270 ClpA/B family AMQ28_07320 IPR003593 AAA+ ATPase domain AMQ28_07330 IPR020084 NUDIX hydrolase, conserved site AMQ28_07330 IPR015797 NUDIX hydrolase-like domain superfamily AMQ28_07330 IPR000086 NUDIX hydrolase domain AMQ28_07330 IPR020476 NUDIX hydrolase AMQ28_07330 IPR003561 Mutator MutT AMQ28_07395 IPR025948 HTH-like domain AMQ28_07395 IPR001584 Integrase, catalytic core AMQ28_07395 IPR012337 Ribonuclease H-like superfamily AMQ28_07395 IPR036397 Ribonuclease H superfamily AMQ28_07405 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMQ28_07405 IPR001650 Helicase, C-terminal AMQ28_07405 IPR038718 SNF2-like, N-terminal domain superfamily AMQ28_07405 IPR000330 SNF2-related, N-terminal domain AMQ28_07405 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_07405 IPR022138 Helicase SWF/SNF-related AMQ28_07425 IPR025948 HTH-like domain AMQ28_07425 IPR001584 Integrase, catalytic core AMQ28_07425 IPR036397 Ribonuclease H superfamily AMQ28_07425 IPR012337 Ribonuclease H-like superfamily AMQ28_07440 IPR001126 UmuC domain AMQ28_07440 IPR025188 Domain of unknown function DUF4113 AMQ28_07440 IPR017961 DNA polymerase, Y-family, little finger domain AMQ28_07440 IPR036775 DNA polymerase, Y-family, little finger domain superfamily AMQ28_07445 IPR001584 Integrase, catalytic core AMQ28_07445 IPR036397 Ribonuclease H superfamily AMQ28_07445 IPR012337 Ribonuclease H-like superfamily AMQ28_07445 IPR032874 DDE domain AMQ28_07460 IPR004029 UreE urease accessory, N-terminal AMQ28_07460 IPR007864 Urease accessory protein UreE, C-terminal domain AMQ28_07460 IPR036675 UreE, C-terminal domain superfamily AMQ28_07460 IPR036118 UreE urease accessory, N-terminal domain superfamily AMQ28_07460 IPR012406 Urease accessory protein UreE AMQ28_07465 IPR002639 Urease accessory protein UreF AMQ28_07465 IPR038277 UreF domain superfamily AMQ28_07470 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMQ28_07470 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_07470 IPR004400 Urease accessory protein UreG AMQ28_07480 IPR002669 Urease accessory protein UreD AMQ28_07485 IPR002026 Urease, gamma/gamma-beta subunit AMQ28_07485 IPR036463 Urease, gamma subunit superfamily AMQ28_07485 IPR012010 Urease, gamma subunit AMQ28_07490 IPR036461 Urease, beta subunit superfamily AMQ28_07490 IPR002019 Urease, beta subunit AMQ28_07495 IPR006680 Amidohydrolase-related AMQ28_07495 IPR011612 Urease alpha-subunit, N-terminal domain AMQ28_07495 IPR017950 Urease active site AMQ28_07495 IPR005848 Urease, alpha subunit AMQ28_07495 IPR017951 Urease alpha subunit, C-terminal AMQ28_07495 IPR029754 Urease nickel binding site AMQ28_07495 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMQ28_07495 IPR032466 Metal-dependent hydrolase AMQ28_07505 IPR001279 Metallo-beta-lactamase AMQ28_07505 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMQ28_07515 IPR007272 Sulphur transport domain AMQ28_07520 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_07520 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_07520 IPR001845 HTH ArsR-type DNA-binding domain AMQ28_07520 IPR011991 ArsR-like helix-turn-helix domain AMQ28_07525 IPR036249 Thioredoxin-like superfamily AMQ28_07525 IPR012336 Thioredoxin-like fold AMQ28_07525 IPR033954 Disulphide bond isomerase, DsbC/G AMQ28_07525 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily AMQ28_07530 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE AMQ28_07530 IPR017937 Thioredoxin, conserved site AMQ28_07530 IPR036249 Thioredoxin-like superfamily AMQ28_07530 IPR013766 Thioredoxin domain AMQ28_07530 IPR013740 Redoxin AMQ28_07535 IPR017937 Thioredoxin, conserved site AMQ28_07535 IPR013766 Thioredoxin domain AMQ28_07535 IPR003834 Cytochrome C biogenesis protein, transmembrane domain AMQ28_07535 IPR036249 Thioredoxin-like superfamily AMQ28_07535 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AMQ28_07535 IPR022910 Thiol:disulphide interchange protein DsbD AMQ28_07535 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AMQ28_07535 IPR035671 DsbD gamma AMQ28_07540 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_07540 IPR001789 Signal transduction response regulator, receiver domain AMQ28_07540 IPR001867 OmpR/PhoB-type DNA-binding domain AMQ28_07540 IPR011006 CheY-like superfamily AMQ28_07540 IPR039420 Transcriptional regulatory protein WalR-like AMQ28_07545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_07545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMQ28_07545 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMQ28_07545 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMQ28_07545 IPR005467 Histidine kinase domain AMQ28_07545 IPR013727 Two-component sensor kinase, N-terminal AMQ28_07545 IPR003660 HAMP domain AMQ28_07545 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_07550 IPR025668 Transposase DDE domain AMQ28_07570 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AMQ28_07570 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMQ28_07570 IPR006249 Aconitase/Iron-responsive element-binding protein 2 AMQ28_07570 IPR018136 Aconitase family, 4Fe-4S cluster binding site AMQ28_07570 IPR036008 Aconitase, iron-sulfur domain AMQ28_07570 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AMQ28_07570 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AMQ28_07585 IPR023753 FAD/NAD(P)-binding domain AMQ28_07585 IPR006322 Glutathione reductase, eukaryote/bacterial AMQ28_07585 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AMQ28_07585 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMQ28_07585 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMQ28_07585 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AMQ28_07585 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_07590 IPR020846 Major facilitator superfamily domain AMQ28_07590 IPR011701 Major facilitator superfamily AMQ28_07590 IPR005829 Sugar transporter, conserved site AMQ28_07590 IPR036259 MFS transporter superfamily AMQ28_07595 IPR009057 Homeobox-like domain superfamily AMQ28_07595 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_07595 IPR002514 Transposase IS3/IS911family AMQ28_07600 IPR025948 HTH-like domain AMQ28_07600 IPR036397 Ribonuclease H superfamily AMQ28_07600 IPR012337 Ribonuclease H-like superfamily AMQ28_07600 IPR001584 Integrase, catalytic core AMQ28_07610 IPR020846 Major facilitator superfamily domain AMQ28_07610 IPR011701 Major facilitator superfamily AMQ28_07610 IPR036259 MFS transporter superfamily AMQ28_07615 IPR027805 Transposase, Helix-turn-helix domain AMQ28_07615 IPR027806 Harbinger transposase-derived nuclease domain AMQ28_07630 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase AMQ28_07630 IPR012938 Glucose/Sorbosone dehydrogenase AMQ28_07630 IPR011042 Six-bladed beta-propeller, TolB-like AMQ28_07640 IPR036144 RibA-like superfamily AMQ28_07640 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMQ28_07640 IPR032677 GTP cyclohydrolase II AMQ28_07640 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB AMQ28_07645 IPR036467 Lumazine/riboflavin synthase superfamily AMQ28_07645 IPR034964 Lumazine synthase AMQ28_07645 IPR002180 Lumazine/riboflavin synthase AMQ28_07650 IPR035926 NusB-like superfamily AMQ28_07650 IPR011605 NusB antitermination factor AMQ28_07650 IPR006027 NusB/RsmB/TIM44 AMQ28_07655 IPR010918 PurM-like, C-terminal domain AMQ28_07655 IPR036921 PurM-like, N-terminal domain superfamily AMQ28_07655 IPR006283 Thiamine-monophosphate kinase AMQ28_07655 IPR036676 PurM-like, C-terminal domain superfamily AMQ28_07655 IPR016188 PurM-like, N-terminal domain AMQ28_07660 IPR007686 YutG/PgpA domain AMQ28_07660 IPR036681 PgpA-like superfamily AMQ28_07660 IPR026037 Phosphatidylglycerophosphatase A AMQ28_07665 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase AMQ28_07665 IPR025877 MobA-like NTP transferase AMQ28_07665 IPR018357 Hexapeptide transferase, conserved site AMQ28_07665 IPR011004 Trimeric LpxA-like superfamily AMQ28_07665 IPR001451 Hexapeptide repeat AMQ28_07665 IPR038009 GlmU, C-terminal LbH domain AMQ28_07665 IPR029044 Nucleotide-diphospho-sugar transferases AMQ28_07670 IPR017932 Glutamine amidotransferase type 2 domain AMQ28_07670 IPR035490 GlmS/FrlB, SIS domain 2 AMQ28_07670 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising AMQ28_07670 IPR029055 Nucleophile aminohydrolases, N-terminal AMQ28_07670 IPR001347 Sugar isomerase (SIS) AMQ28_07670 IPR035466 GlmS/AgaS, SIS domain 1 AMQ28_07675 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AMQ28_07675 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AMQ28_07675 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AMQ28_07675 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AMQ28_07675 IPR005843 Alpha-D-phosphohexomutase, C-terminal AMQ28_07675 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AMQ28_07675 IPR016066 Alpha-D-phosphohexomutase, conserved site AMQ28_07675 IPR005841 Alpha-D-phosphohexomutase superfamily AMQ28_07680 IPR005886 UDP-glucose 4-epimerase AMQ28_07680 IPR036291 NAD(P)-binding domain superfamily AMQ28_07680 IPR016040 NAD(P)-binding domain AMQ28_07685 IPR035482 Phosphoglucose isomerase, SIS domain 2 AMQ28_07685 IPR001672 Phosphoglucose isomerase (PGI) AMQ28_07685 IPR035476 Phosphoglucose isomerase, SIS domain 1 AMQ28_07685 IPR018189 Phosphoglucose isomerase, conserved site AMQ28_07685 IPR023096 Phosphoglucose isomerase, C-terminal AMQ28_07690 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AMQ28_07690 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type AMQ28_07690 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AMQ28_07690 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AMQ28_07690 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AMQ28_07690 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AMQ28_07690 IPR036291 NAD(P)-binding domain superfamily AMQ28_07690 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMQ28_07695 IPR005835 Nucleotidyl transferase domain AMQ28_07695 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type AMQ28_07695 IPR029044 Nucleotide-diphospho-sugar transferases AMQ28_07700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_07700 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AMQ28_07700 IPR036291 NAD(P)-binding domain superfamily AMQ28_07705 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMQ28_07705 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_07705 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_07705 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_07725 IPR003362 Bacterial sugar transferase AMQ28_07730 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMQ28_07730 IPR001296 Glycosyl transferase, family 1 AMQ28_07740 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMQ28_07740 IPR001296 Glycosyl transferase, family 1 AMQ28_07750 IPR001296 Glycosyl transferase, family 1 AMQ28_07765 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMQ28_07765 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AMQ28_07765 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AMQ28_07765 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AMQ28_07765 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase AMQ28_07765 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AMQ28_07765 IPR036291 NAD(P)-binding domain superfamily AMQ28_07765 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AMQ28_07770 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain AMQ28_07770 IPR019554 Soluble ligand binding domain AMQ28_07770 IPR003715 Polysaccharide export protein AMQ28_07775 IPR023485 Phosphotyrosine protein phosphatase I AMQ28_07775 IPR036196 Phosphotyrosine protein phosphatase I superfamily AMQ28_07775 IPR017867 Protein-tyrosine phosphatase, low molecular weight AMQ28_07780 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_07780 IPR003856 Polysaccharide chain length determinant N-terminal domain AMQ28_07780 IPR032807 Tyrosine kinase, G-rich domain AMQ28_07780 IPR005702 Exopolysaccharide synthesis protein AMQ28_07780 IPR025669 AAA domain AMQ28_07785 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily AMQ28_07785 IPR008104 Macrophage infectivity potentiator AMQ28_07785 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal AMQ28_07785 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMQ28_07790 IPR008104 Macrophage infectivity potentiator AMQ28_07790 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMQ28_07790 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily AMQ28_07790 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal AMQ28_07795 IPR003140 Phospholipase/carboxylesterase/thioesterase AMQ28_07795 IPR029058 Alpha/Beta hydrolase fold AMQ28_07805 IPR015797 NUDIX hydrolase-like domain superfamily AMQ28_07805 IPR029119 MutY, C-terminal AMQ28_07805 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMQ28_07805 IPR000445 Helix-hairpin-helix motif AMQ28_07805 IPR004035 Endonuclease III, iron-sulphur binding site AMQ28_07805 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AMQ28_07805 IPR004036 Endonuclease III-like, conserved site-2 AMQ28_07805 IPR011257 DNA glycosylase AMQ28_07805 IPR005760 A/G-specific adenine glycosylase MutY AMQ28_07805 IPR003265 HhH-GPD domain AMQ28_07820 IPR011257 DNA glycosylase AMQ28_07820 IPR004597 DNA-3-methyladenine glycosylase I AMQ28_07820 IPR005019 Methyladenine glycosylase AMQ28_07825 IPR020843 Polyketide synthase, enoylreductase domain AMQ28_07825 IPR011032 GroES-like superfamily AMQ28_07825 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMQ28_07825 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMQ28_07825 IPR013154 Alcohol dehydrogenase, N-terminal AMQ28_07825 IPR013149 Alcohol dehydrogenase, C-terminal AMQ28_07825 IPR036291 NAD(P)-binding domain superfamily AMQ28_07830 IPR005119 LysR, substrate-binding AMQ28_07830 IPR000847 Transcription regulator HTH, LysR AMQ28_07830 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_07830 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_07840 IPR022664 Dihydrodipicolinate reductase, conserved site AMQ28_07840 IPR023940 Dihydrodipicolinate reductase AMQ28_07840 IPR022663 Dihydrodipicolinate reductase, C-terminal AMQ28_07840 IPR036291 NAD(P)-binding domain superfamily AMQ28_07840 IPR000846 Dihydrodipicolinate reductase, N-terminal AMQ28_07850 IPR018253 DnaJ domain, conserved site AMQ28_07850 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AMQ28_07850 IPR012724 Chaperone DnaJ AMQ28_07850 IPR002939 Chaperone DnaJ, C-terminal AMQ28_07850 IPR001623 DnaJ domain AMQ28_07850 IPR008971 HSP40/DnaJ peptide-binding AMQ28_07850 IPR001305 Heat shock protein DnaJ, cysteine-rich domain AMQ28_07850 IPR036869 Chaperone J-domain superfamily AMQ28_07860 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AMQ28_07860 IPR001036 Acriflavin resistance protein AMQ28_07860 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMQ28_07865 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMQ28_07865 IPR030190 Macrolide export protein MacA AMQ28_07865 IPR006143 RND efflux pump, membrane fusion protein AMQ28_07870 IPR009057 Homeobox-like domain superfamily AMQ28_07870 IPR001647 DNA-binding HTH domain, TetR-type AMQ28_07875 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMQ28_07875 IPR033129 Phosphoenolpyruvate carboxylase, His active site AMQ28_07875 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site AMQ28_07875 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type AMQ28_07875 IPR021135 Phosphoenolpyruvate carboxylase AMQ28_07880 IPR019918 Pyrimidine permease RutG, predicted AMQ28_07880 IPR006042 Xanthine/uracil permease AMQ28_07880 IPR006043 Xanthine/uracil/vitamin C permease AMQ28_07885 IPR005119 LysR, substrate-binding AMQ28_07885 IPR000847 Transcription regulator HTH, LysR AMQ28_07885 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_07885 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_07905 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AMQ28_07905 IPR042096 Dihydroxy-acid dehydratase, C-terminal AMQ28_07905 IPR037237 IlvD/EDD, N-terminal domain AMQ28_07905 IPR004404 Dihydroxy-acid dehydratase AMQ28_07905 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AMQ28_07910 IPR004404 Dihydroxy-acid dehydratase AMQ28_07910 IPR042096 Dihydroxy-acid dehydratase, C-terminal AMQ28_07910 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AMQ28_07910 IPR037237 IlvD/EDD, N-terminal domain AMQ28_07910 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AMQ28_07915 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain AMQ28_07915 IPR011034 Formyl transferase-like, C-terminal domain superfamily AMQ28_07915 IPR036477 Formyl transferase, N-terminal domain superfamily AMQ28_07915 IPR002376 Formyl transferase, N-terminal AMQ28_07915 IPR037022 Formyl transferase, C-terminal domain superfamily AMQ28_07915 IPR005794 Methionyl-tRNA formyltransferase AMQ28_07915 IPR005793 Formyl transferase, C-terminal AMQ28_07920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_07920 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae AMQ28_07920 IPR004573 rRNA small subunit methyltransferase B AMQ28_07920 IPR023267 RNA (C5-cytosine) methyltransferase AMQ28_07920 IPR006027 NusB/RsmB/TIM44 AMQ28_07920 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site AMQ28_07920 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type AMQ28_07920 IPR035926 NusB-like superfamily AMQ28_07925 IPR023498 Zinc transporter ZupT AMQ28_07925 IPR003689 Zinc/iron permease AMQ28_07930 IPR037272 Sodium:neurotransmitter symporter superfamily AMQ28_07930 IPR000175 Sodium:neurotransmitter symporter AMQ28_07970 IPR029000 Cyclophilin-like domain superfamily AMQ28_07970 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AMQ28_07970 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AMQ28_07980 IPR013094 Alpha/beta hydrolase fold-3 AMQ28_07980 IPR029058 Alpha/Beta hydrolase fold AMQ28_07995 IPR013805 GrpE nucleotide exchange factor, coiled-coil AMQ28_07995 IPR000740 GrpE nucleotide exchange factor AMQ28_07995 IPR009012 GrpE nucleotide exchange factor, head AMQ28_08000 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily AMQ28_08000 IPR018181 Heat shock protein 70, conserved site AMQ28_08000 IPR013126 Heat shock protein 70 family AMQ28_08000 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily AMQ28_08000 IPR012725 Chaperone DnaK AMQ28_08005 IPR001279 Metallo-beta-lactamase AMQ28_08005 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMQ28_08005 IPR022877 Protein of unknown funcion UPF0173 AMQ28_08050 IPR000361 FeS cluster biogenesis AMQ28_08050 IPR016092 FeS cluster insertion protein AMQ28_08050 IPR017870 FeS cluster insertion, C-terminal, conserved site AMQ28_08050 IPR023063 FeS cluster insertion protein ErpA AMQ28_08050 IPR035903 HesB-like domain superfamily AMQ28_08055 IPR038404 TRAP transporter solute receptor DctP superfamily AMQ28_08060 IPR038404 TRAP transporter solute receptor DctP superfamily AMQ28_08065 IPR038404 TRAP transporter solute receptor DctP superfamily AMQ28_08070 IPR003593 AAA+ ATPase domain AMQ28_08070 IPR032781 ABC-transporter extension domain AMQ28_08070 IPR003439 ABC transporter-like AMQ28_08070 IPR017871 ABC transporter, conserved site AMQ28_08070 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_08080 IPR011557 DNA gyrase, subunit B AMQ28_08080 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal AMQ28_08080 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_08080 IPR018522 DNA topoisomerase, type IIA, conserved site AMQ28_08080 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMQ28_08080 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_08080 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_08080 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AMQ28_08080 IPR002288 DNA gyrase B subunit, C-terminal AMQ28_08080 IPR034160 DNA gyrase subunit B, TOPRIM domain AMQ28_08080 IPR041423 DNA gyrase subunit B insert domain AMQ28_08080 IPR006171 TOPRIM domain AMQ28_08080 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AMQ28_08080 IPR001241 DNA topoisomerase, type IIA AMQ28_08085 IPR042174 DNA-binding RecF, domain 2 AMQ28_08085 IPR003395 RecF/RecN/SMC, N-terminal AMQ28_08085 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_08085 IPR001238 DNA-binding, RecF AMQ28_08090 IPR022637 DNA polymerase III, beta sliding clamp, central AMQ28_08090 IPR001001 DNA polymerase III, beta sliding clamp AMQ28_08090 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal AMQ28_08090 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal AMQ28_08095 IPR003593 AAA+ ATPase domain AMQ28_08095 IPR001957 Chromosomal replication control, initiator DnaA AMQ28_08095 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_08095 IPR013159 Chromosomal replication initiator, DnaA C-terminal AMQ28_08095 IPR038454 DnaA, N-terminal domain superfamily AMQ28_08095 IPR024633 DnaA N-terminal domain AMQ28_08095 IPR020591 Chromosomal replication control, initiator DnaA-like AMQ28_08095 IPR013317 Chromosomal replication initiator protein DnaA AMQ28_08095 IPR018312 Chromosomal replication control, initiator DnaA, conserved site AMQ28_08095 IPR010921 Trp repressor/replication initiator AMQ28_08100 IPR000271 Ribosomal protein L34 AMQ28_08100 IPR020939 Ribosomal protein L34, conserved site AMQ28_08105 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_08105 IPR000100 Ribonuclease P AMQ28_08105 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMQ28_08105 IPR020539 Ribonuclease P, conserved site AMQ28_08110 IPR002696 Putative membrane protein insertion efficiency factor AMQ28_08115 IPR019998 Membrane insertase YidC AMQ28_08115 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 AMQ28_08115 IPR028053 Membrane insertase YidC, N-terminal AMQ28_08115 IPR038210 Membrane insertase YidC, periplasmic domain AMQ28_08115 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AMQ28_08115 IPR038221 YidC, periplasmic domain superfamily AMQ28_08120 IPR031168 TrmE-type guanine nucleotide-binding domain AMQ28_08120 IPR006073 GTP binding domain AMQ28_08120 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AMQ28_08120 IPR005225 Small GTP-binding protein domain AMQ28_08120 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_08120 IPR025867 MnmE, helical domain AMQ28_08120 IPR027368 tRNA modification GTPase MnmE domain 2 AMQ28_08120 IPR004520 tRNA modification GTPase MnmE AMQ28_08120 IPR018948 GTP-binding protein TrmE, N-terminal AMQ28_08130 IPR033954 Disulphide bond isomerase, DsbC/G AMQ28_08130 IPR012336 Thioredoxin-like fold AMQ28_08130 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AMQ28_08130 IPR017937 Thioredoxin, conserved site AMQ28_08130 IPR036249 Thioredoxin-like superfamily AMQ28_08140 IPR029057 Phosphoribosyltransferase-like AMQ28_08140 IPR000836 Phosphoribosyltransferase domain AMQ28_08140 IPR005904 Hypoxanthine phosphoribosyl transferase AMQ28_08145 IPR006680 Amidohydrolase-related AMQ28_08145 IPR014311 Guanine deaminase AMQ28_08145 IPR032466 Metal-dependent hydrolase AMQ28_08145 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMQ28_08150 IPR022369 Integral membrane protein TerC, riboswitch-linked AMQ28_08150 IPR005496 Integral membrane protein TerC AMQ28_08155 IPR036259 MFS transporter superfamily AMQ28_08155 IPR023495 Sugar efflux transporter, putative AMQ28_08155 IPR020846 Major facilitator superfamily domain AMQ28_08155 IPR011701 Major facilitator superfamily AMQ28_08160 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AMQ28_08160 IPR016181 Acyl-CoA N-acyltransferase AMQ28_08165 IPR000713 Mur ligase, N-terminal catalytic domain AMQ28_08165 IPR013221 Mur ligase, central AMQ28_08165 IPR005757 Murein peptide ligase AMQ28_08165 IPR036565 Mur-like, catalytic domain superfamily AMQ28_08165 IPR004101 Mur ligase, C-terminal AMQ28_08165 IPR036615 Mur ligase, C-terminal domain superfamily AMQ28_08175 IPR033747 Class I PurE AMQ28_08175 IPR000031 PurE domain AMQ28_08175 IPR024694 PurE, prokaryotic type AMQ28_08175 IPR035893 PurE domain superfamily AMQ28_08180 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AMQ28_08180 IPR013815 ATP-grasp fold, subdomain 1 AMQ28_08180 IPR016185 Pre-ATP-grasp domain superfamily AMQ28_08180 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit AMQ28_08180 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain AMQ28_08180 IPR011761 ATP-grasp fold AMQ28_08180 IPR011054 Rudiment single hybrid motif AMQ28_08185 IPR023346 Lysozyme-like domain superfamily AMQ28_08185 IPR031304 Transglycosylase SLT domain 2 AMQ28_08185 IPR011757 Lytic transglycosylase MltB AMQ28_08190 IPR005338 Anhydro-N-acetylmuramic acid kinase AMQ28_08195 IPR036986 RNA-binding S4 domain superfamily AMQ28_08195 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 AMQ28_08195 IPR024088 Tyrosine-tRNA ligase, bacterial-type AMQ28_08195 IPR002307 Tyrosine-tRNA ligase AMQ28_08195 IPR002942 RNA-binding S4 domain AMQ28_08195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_08195 IPR002305 Aminoacyl-tRNA synthetase, class Ic AMQ28_08195 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMQ28_08225 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase AMQ28_08225 IPR011042 Six-bladed beta-propeller, TolB-like AMQ28_08225 IPR012938 Glucose/Sorbosone dehydrogenase AMQ28_08235 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMQ28_08240 IPR001872 Peptidase A8, signal peptidase II AMQ28_08245 IPR002300 Aminoacyl-tRNA synthetase, class Ia AMQ28_08245 IPR010663 Zinc finger, FPG/IleRS-type AMQ28_08245 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AMQ28_08245 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMQ28_08245 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMQ28_08245 IPR023585 Isoleucine-tRNA ligase, type 1 AMQ28_08245 IPR002301 Isoleucine-tRNA ligase AMQ28_08245 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_08245 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain AMQ28_08245 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AMQ28_08250 IPR023465 Riboflavin kinase domain superfamily AMQ28_08250 IPR002606 Riboflavin kinase, bacterial AMQ28_08250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_08250 IPR015864 FAD synthetase AMQ28_08250 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic AMQ28_08250 IPR023468 Riboflavin kinase AMQ28_08265 IPR001647 DNA-binding HTH domain, TetR-type AMQ28_08265 IPR009057 Homeobox-like domain superfamily AMQ28_08265 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMQ28_08265 IPR019915 Transcription regulator, pyrimidine utilisation, RutR AMQ28_08265 IPR013573 Transcription regulator YcdC, C-terminal AMQ28_08270 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_08270 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB AMQ28_08270 IPR003593 AAA+ ATPase domain AMQ28_08270 IPR003439 ABC transporter-like AMQ28_08275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMQ28_08275 IPR035906 MetI-like superfamily AMQ28_08295 IPR036661 Luciferase-like domain superfamily AMQ28_08295 IPR011251 Luciferase-like domain AMQ28_08295 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent AMQ28_08300 IPR010067 Aliphatic sulfonates-binding protein AMQ28_08300 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMQ28_08300 IPR015168 SsuA/THI5-like AMQ28_08305 IPR015168 SsuA/THI5-like AMQ28_08305 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMQ28_08305 IPR010067 Aliphatic sulfonates-binding protein AMQ28_08310 IPR001048 Aspartate/glutamate/uridylate kinase AMQ28_08310 IPR000182 GNAT domain AMQ28_08310 IPR033719 N-acetylglutamate synthase, kinase-like domain AMQ28_08310 IPR010167 Amino-acid N-acetyltransferase AMQ28_08310 IPR036393 Acetylglutamate kinase-like superfamily AMQ28_08310 IPR016181 Acyl-CoA N-acyltransferase AMQ28_08325 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_08325 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMQ28_08325 IPR036291 NAD(P)-binding domain superfamily AMQ28_08330 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMQ28_08330 IPR023214 HAD superfamily AMQ28_08330 IPR041492 Haloacid dehalogenase-like hydrolase AMQ28_08330 IPR006439 HAD hydrolase, subfamily IA AMQ28_08330 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AMQ28_08330 IPR036412 HAD-like superfamily AMQ28_08335 IPR010233 Ubiquinone biosynthesis O-methyltransferase AMQ28_08335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_08340 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AMQ28_08340 IPR017937 Thioredoxin, conserved site AMQ28_08340 IPR013766 Thioredoxin domain AMQ28_08340 IPR001853 DSBA-like thioredoxin domain AMQ28_08340 IPR036249 Thioredoxin-like superfamily AMQ28_08345 IPR001647 DNA-binding HTH domain, TetR-type AMQ28_08345 IPR009057 Homeobox-like domain superfamily AMQ28_08345 IPR023764 Transcriptional repressor HTH, FabR AMQ28_08350 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMQ28_08350 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMQ28_08350 IPR017938 Riboflavin synthase-like beta-barrel AMQ28_08350 IPR036010 2Fe-2S ferredoxin-like superfamily AMQ28_08350 IPR017927 FAD-binding domain, ferredoxin reductase-type AMQ28_08350 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMQ28_08350 IPR012675 Beta-grasp domain superfamily AMQ28_08350 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMQ28_08350 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMQ28_08355 IPR005804 Fatty acid desaturase domain AMQ28_08360 IPR018336 Ribonuclease PH, conserved site AMQ28_08360 IPR002381 Ribonuclease PH, bacterial-type AMQ28_08360 IPR036345 Exoribonuclease, PH domain 2 superfamily AMQ28_08360 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_08360 IPR027408 PNPase/RNase PH domain superfamily AMQ28_08360 IPR001247 Exoribonuclease, phosphorolytic domain 1 AMQ28_08360 IPR015847 Exoribonuclease, phosphorolytic domain 2 AMQ28_08365 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal AMQ28_08365 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal AMQ28_08365 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal AMQ28_08365 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily AMQ28_08365 IPR013785 Aldolase-type TIM barrel AMQ28_08365 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD AMQ28_08365 IPR004393 Nicotinate-nucleotide pyrophosphorylase AMQ28_08370 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily AMQ28_08370 IPR002502 N-acetylmuramoyl-L-alanine amidase domain AMQ28_08375 IPR004268 Peptidoglycan biosynthesis protein MurJ AMQ28_08380 IPR005358 Putative zinc- or iron-chelating domain containing protein AMQ28_08380 IPR008228 Uncharacterised conserved protein UCP006173 AMQ28_08385 IPR035965 PAS domain superfamily AMQ28_08385 IPR029787 Nucleotide cyclase AMQ28_08385 IPR035919 EAL domain superfamily AMQ28_08385 IPR000160 GGDEF domain AMQ28_08385 IPR005330 MHYT domain AMQ28_08385 IPR001633 EAL domain AMQ28_08390 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AMQ28_08390 IPR003959 ATPase, AAA-type, core AMQ28_08390 IPR032423 AAA C-terminal domain AMQ28_08390 IPR003593 AAA+ ATPase domain AMQ28_08390 IPR021886 MgsA AAA+ ATPase C-terminal AMQ28_08390 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_08395 IPR028923 SAICAR synthetase/ADE2, N-terminal AMQ28_08395 IPR018236 SAICAR synthetase, conserved site AMQ28_08395 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase AMQ28_08395 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase AMQ28_08405 IPR020625 Schiff base-forming aldolase, active site AMQ28_08405 IPR002220 DapA-like AMQ28_08405 IPR013785 Aldolase-type TIM barrel AMQ28_08405 IPR020624 Schiff base-forming aldolase, conserved site AMQ28_08405 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA AMQ28_08410 IPR036380 Isochorismatase-like superfamily AMQ28_08410 IPR000868 Isochorismatase-like AMQ28_08415 IPR004710 Bile acid:sodium symporter AMQ28_08415 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 AMQ28_08415 IPR038770 Sodium/solute symporter superfamily AMQ28_08425 IPR002912 ACT domain AMQ28_08425 IPR036412 HAD-like superfamily AMQ28_08425 IPR023214 HAD superfamily AMQ28_08425 IPR023190 Phosphoserine phosphatase, domain 2 AMQ28_08440 IPR003732 D-aminoacyl-tRNA deacylase DTD AMQ28_08440 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AMQ28_08445 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase AMQ28_08445 IPR006406 Nicotinate phosphoribosyltransferase AMQ28_08445 IPR007229 Nicotinate phosphoribosyltransferase family AMQ28_08445 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal AMQ28_08445 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain AMQ28_08450 IPR001307 Thiosulphate sulfurtransferase, conserved site AMQ28_08450 IPR001763 Rhodanese-like domain AMQ28_08450 IPR036873 Rhodanese-like domain superfamily AMQ28_08455 IPR033177 Phosphatidylserine decarboxylase AMQ28_08455 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 AMQ28_08455 IPR003817 Phosphatidylserine decarboxylase-related AMQ28_08465 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMQ28_08465 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily AMQ28_08465 IPR001278 Arginine-tRNA ligase AMQ28_08465 IPR005148 Arginyl tRNA synthetase N-terminal domain AMQ28_08465 IPR035684 Arginyl-tRNA synthetase, catalytic core domain AMQ28_08465 IPR008909 DALR anticodon binding AMQ28_08475 IPR007383 Protein of unknown function DUF445 AMQ28_08495 IPR007370 Glutamate--cysteine ligase AMQ28_08495 IPR006334 Glutamate--cysteine ligase, monofunctional AMQ28_08495 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMQ28_08500 IPR022920 Disulphide bond formation protein DsbB AMQ28_08500 IPR023380 DsbB-like superfamily AMQ28_08500 IPR003752 Disulphide bond formation protein DsbB/BdbC AMQ28_08510 IPR029058 Alpha/Beta hydrolase fold AMQ28_08510 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AMQ28_08515 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_08515 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMQ28_08515 IPR001241 DNA topoisomerase, type IIA AMQ28_08515 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AMQ28_08515 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_08515 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal AMQ28_08515 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AMQ28_08515 IPR018522 DNA topoisomerase, type IIA, conserved site AMQ28_08515 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative AMQ28_08515 IPR006171 TOPRIM domain AMQ28_08515 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_08515 IPR002288 DNA gyrase B subunit, C-terminal AMQ28_08520 IPR016181 Acyl-CoA N-acyltransferase AMQ28_08520 IPR000182 GNAT domain AMQ28_08545 IPR003834 Cytochrome C biogenesis protein, transmembrane domain AMQ28_08545 IPR036249 Thioredoxin-like superfamily AMQ28_08545 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AMQ28_08545 IPR035671 DsbD gamma AMQ28_08545 IPR017937 Thioredoxin, conserved site AMQ28_08545 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AMQ28_08545 IPR013766 Thioredoxin domain AMQ28_08545 IPR022910 Thiol:disulphide interchange protein DsbD AMQ28_08550 IPR039435 Diguanylate cyclase DosC, globin sensor domain AMQ28_08550 IPR000160 GGDEF domain AMQ28_08550 IPR009050 Globin-like superfamily AMQ28_08550 IPR012292 Globin/Protoglobin AMQ28_08550 IPR029787 Nucleotide cyclase AMQ28_08555 IPR029039 Flavoprotein-like superfamily AMQ28_08555 IPR003680 Flavodoxin-like fold AMQ28_08555 IPR023048 NADH-azoreductase, FMN-dependent AMQ28_08560 IPR002168 Lipase, GDXG, putative histidine active site AMQ28_08560 IPR029058 Alpha/Beta hydrolase fold AMQ28_08560 IPR013094 Alpha/beta hydrolase fold-3 AMQ28_08560 IPR033140 Lipase, GDXG, putative serine active site AMQ28_08570 IPR006660 Arsenate reductase-like AMQ28_08570 IPR036249 Thioredoxin-like superfamily AMQ28_08570 IPR006504 Transcriptional regulator Spx/MgsR AMQ28_08575 IPR004808 AP endonuclease 1 AMQ28_08575 IPR020848 AP endonuclease 1, conserved site AMQ28_08575 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMQ28_08575 IPR005135 Endonuclease/exonuclease/phosphatase AMQ28_08575 IPR020847 AP endonuclease 1, binding site AMQ28_08580 IPR000836 Phosphoribosyltransferase domain AMQ28_08580 IPR004467 Orotate phosphoribosyl transferase domain AMQ28_08580 IPR023031 Orotate phosphoribosyltransferase AMQ28_08580 IPR029057 Phosphoribosyltransferase-like AMQ28_08585 IPR012910 TonB-dependent receptor, plug domain AMQ28_08585 IPR037066 TonB-dependent receptor, plug domain superfamily AMQ28_08585 IPR010105 TonB-dependent siderophore receptor AMQ28_08585 IPR039423 TonB-dependent receptor-like AMQ28_08585 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMQ28_08585 IPR000531 TonB-dependent receptor-like, beta-barrel AMQ28_08590 IPR025668 Transposase DDE domain AMQ28_08595 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_08595 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_08595 IPR000835 MarR-type HTH domain AMQ28_08600 IPR029760 Glutathione peroxidase conserved site AMQ28_08600 IPR036249 Thioredoxin-like superfamily AMQ28_08600 IPR000889 Glutathione peroxidase AMQ28_08600 IPR029759 Glutathione peroxidase active site AMQ28_08605 IPR011761 ATP-grasp fold AMQ28_08605 IPR013815 ATP-grasp fold, subdomain 1 AMQ28_08605 IPR004215 Prokaryotic glutathione synthetase, N-terminal AMQ28_08605 IPR006284 Glutathione synthetase, prokaryotic AMQ28_08605 IPR004218 Prokaryotic glutathione synthetase, ATP-binding AMQ28_08605 IPR016185 Pre-ATP-grasp domain superfamily AMQ28_08610 IPR007235 Glycosyl transferase, family 28, C-terminal AMQ28_08610 IPR004276 Glycosyltransferase family 28, N-terminal domain AMQ28_08610 IPR006009 N-acetylglucosaminyltransferase, MurG AMQ28_08615 IPR036565 Mur-like, catalytic domain superfamily AMQ28_08615 IPR036615 Mur ligase, C-terminal domain superfamily AMQ28_08615 IPR005758 UDP-N-acetylmuramate--L-alanine ligase AMQ28_08615 IPR000713 Mur ligase, N-terminal catalytic domain AMQ28_08615 IPR004101 Mur ligase, C-terminal AMQ28_08615 IPR013221 Mur ligase, central AMQ28_08620 IPR011761 ATP-grasp fold AMQ28_08620 IPR013815 ATP-grasp fold, subdomain 1 AMQ28_08620 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site AMQ28_08620 IPR005905 D-alanine--D-alanine ligase AMQ28_08620 IPR011095 D-alanine--D-alanine ligase, C-terminal AMQ28_08620 IPR016185 Pre-ATP-grasp domain superfamily AMQ28_08620 IPR011127 D-alanine--D-alanine ligase, N-terminal domain AMQ28_08625 IPR005548 Cell division protein FtsQ/DivIB AMQ28_08625 IPR026579 Cell division protein FtsQ AMQ28_08625 IPR034746 POTRA domain AMQ28_08625 IPR013685 POTRA domain, FtsQ-type AMQ28_08630 IPR003494 SHS2 domain inserted in FtsA AMQ28_08630 IPR020823 Cell division protein FtsA AMQ28_08635 IPR003008 Tubulin/FtsZ, GTPase domain AMQ28_08635 IPR036525 Tubulin/FtsZ, GTPase domain superfamily AMQ28_08635 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AMQ28_08635 IPR024757 Cell division protein FtsZ, C-terminal AMQ28_08635 IPR020805 Cell division protein FtsZ, conserved site AMQ28_08635 IPR000158 Cell division protein FtsZ AMQ28_08635 IPR008280 Tubulin/FtsZ, C-terminal AMQ28_08640 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_08640 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase AMQ28_08640 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal AMQ28_08640 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal AMQ28_08655 IPR005474 Transketolase, N-terminal AMQ28_08655 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMQ28_08655 IPR029061 Thiamin diphosphate-binding fold AMQ28_08655 IPR041621 Pyruvate dehydrogenase E1 component, middle domain AMQ28_08655 IPR004660 Pyruvate dehydrogenase E1 component AMQ28_08655 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal AMQ28_08660 IPR000089 Biotin/lipoyl attachment AMQ28_08660 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex AMQ28_08660 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMQ28_08660 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AMQ28_08660 IPR004167 Peripheral subunit-binding domain AMQ28_08660 IPR011053 Single hybrid motif AMQ28_08660 IPR036625 E3-binding domain superfamily AMQ28_08660 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMQ28_08665 IPR001727 Gdt1 family AMQ28_08670 IPR005358 Putative zinc- or iron-chelating domain containing protein AMQ28_08675 IPR013785 Aldolase-type TIM barrel AMQ28_08675 IPR000644 CBS domain AMQ28_08675 IPR005990 Inosine-5'-monophosphate dehydrogenase AMQ28_08675 IPR015875 IMP dehydrogenase / GMP reductase, conserved site AMQ28_08675 IPR001093 IMP dehydrogenase/GMP reductase AMQ28_08680 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AMQ28_08680 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AMQ28_08680 IPR006352 Phosphoglucosamine mutase, bacterial type AMQ28_08680 IPR005841 Alpha-D-phosphohexomutase superfamily AMQ28_08680 IPR016066 Alpha-D-phosphohexomutase, conserved site AMQ28_08680 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AMQ28_08680 IPR005843 Alpha-D-phosphohexomutase, C-terminal AMQ28_08680 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AMQ28_08680 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AMQ28_08685 IPR000659 Pyridoxamine 5'-phosphate oxidase AMQ28_08685 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal AMQ28_08685 IPR012349 FMN-binding split barrel AMQ28_08685 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative AMQ28_08685 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site AMQ28_08690 IPR041122 RecJ, OB domain AMQ28_08690 IPR003156 DHHA1 domain AMQ28_08690 IPR038763 DHH phosphoesterase superfamily AMQ28_08690 IPR001667 DDH domain AMQ28_08690 IPR004610 Bacterial RecJ exonuclease AMQ28_08700 IPR000352 Peptide chain release factor class I AMQ28_08700 IPR004374 Peptide chain release factor 2 AMQ28_08700 IPR005139 Peptide chain release factor AMQ28_08710 IPR013785 Aldolase-type TIM barrel AMQ28_08710 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AMQ28_08715 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily AMQ28_08715 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal AMQ28_08715 IPR039901 3-deoxy-D-manno-octulosonic acid transferase AMQ28_08720 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMQ28_08720 IPR006700 Ribosomal RNA small subunit methyltransferase E AMQ28_08720 IPR029028 Alpha/beta knot methyltransferases AMQ28_08725 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AMQ28_08725 IPR011066 Mechanosensitive ion channel MscS, C-terminal AMQ28_08725 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMQ28_08725 IPR006685 Mechanosensitive ion channel MscS AMQ28_08725 IPR010920 LSM domain superfamily AMQ28_08735 IPR011904 Acetate-CoA ligase AMQ28_08735 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain AMQ28_08735 IPR025110 AMP-binding enzyme, C-terminal domain AMQ28_08735 IPR020845 AMP-binding, conserved site AMQ28_08735 IPR042099 AMP-dependent synthetase-like superfamily AMQ28_08735 IPR000873 AMP-dependent synthetase/ligase AMQ28_08740 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AMQ28_08740 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMQ28_08740 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMQ28_08740 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMQ28_08740 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMQ28_08750 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG AMQ28_08750 IPR036661 Luciferase-like domain superfamily AMQ28_08750 IPR011251 Luciferase-like domain AMQ28_08755 IPR019912 FMN reductase, MsuE-like AMQ28_08755 IPR005025 NADPH-dependent FMN reductase-like AMQ28_08755 IPR029039 Flavoprotein-like superfamily AMQ28_08760 IPR011006 CheY-like superfamily AMQ28_08760 IPR001789 Signal transduction response regulator, receiver domain AMQ28_08760 IPR016032 Signal transduction response regulator, C-terminal effector AMQ28_08760 IPR000792 Transcription regulator LuxR, C-terminal AMQ28_08770 IPR036641 HPT domain superfamily AMQ28_08770 IPR038188 TorS, sensor domain superfamily AMQ28_08770 IPR037952 Sensor histidine kinase TorS, sensor domain AMQ28_08770 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMQ28_08770 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMQ28_08770 IPR001789 Signal transduction response regulator, receiver domain AMQ28_08770 IPR005467 Histidine kinase domain AMQ28_08770 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AMQ28_08770 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_08770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_08770 IPR011006 CheY-like superfamily AMQ28_08770 IPR003660 HAMP domain AMQ28_08770 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMQ28_08775 IPR007436 Protein of unknown function DUF485 AMQ28_08780 IPR014083 Cation/acetate symporter ActP AMQ28_08780 IPR038377 Sodium/glucose symporter superfamily AMQ28_08780 IPR018212 Sodium/solute symporter, conserved site AMQ28_08780 IPR001734 Sodium/solute symporter AMQ28_08790 IPR000060 BCCT transporter family AMQ28_08790 IPR018093 BCCT transporter, conserved site AMQ28_08800 IPR012338 Beta-lactamase/transpeptidase-like AMQ28_08800 IPR001460 Penicillin-binding protein, transpeptidase AMQ28_08805 IPR017871 ABC transporter, conserved site AMQ28_08805 IPR004602 UvrABC system subunit A AMQ28_08805 IPR041552 UvrA DNA-binding domain AMQ28_08805 IPR041102 UvrA, interaction domain AMQ28_08805 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_08805 IPR003439 ABC transporter-like AMQ28_08815 IPR009707 Membrane protein GlpM/YdgC AMQ28_08820 IPR022998 Thiamine phosphate synthase/TenI AMQ28_08820 IPR034291 Thiamine phosphate synthase AMQ28_08820 IPR013785 Aldolase-type TIM barrel AMQ28_08820 IPR016084 Haem oxygenase-like, multi-helical AMQ28_08820 IPR036206 Thiamin phosphate synthase superfamily AMQ28_08820 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase AMQ28_08820 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AMQ28_08820 IPR004305 Thiaminase-2/PQQC AMQ28_08820 IPR029056 Ribokinase-like AMQ28_08830 IPR011701 Major facilitator superfamily AMQ28_08830 IPR020846 Major facilitator superfamily domain AMQ28_08830 IPR036259 MFS transporter superfamily AMQ28_08845 IPR025948 HTH-like domain AMQ28_08845 IPR001584 Integrase, catalytic core AMQ28_08845 IPR012337 Ribonuclease H-like superfamily AMQ28_08845 IPR036397 Ribonuclease H superfamily AMQ28_08850 IPR009057 Homeobox-like domain superfamily AMQ28_08850 IPR002514 Transposase IS3/IS911family AMQ28_08850 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_08865 IPR012340 Nucleic acid-binding, OB-fold AMQ28_08865 IPR000424 Primosome PriB/single-strand DNA-binding AMQ28_08865 IPR011344 Single-stranded DNA-binding protein AMQ28_08870 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMQ28_08870 IPR013762 Integrase-like, catalytic domain superfamily AMQ28_08870 IPR010998 Integrase/recombinase, N-terminal AMQ28_08870 IPR002104 Integrase, catalytic domain AMQ28_08870 IPR004107 Integrase, SAM-like, N-terminal AMQ28_08880 IPR001207 Transposase, mutator type AMQ28_08910 IPR025948 HTH-like domain AMQ28_08910 IPR036397 Ribonuclease H superfamily AMQ28_08910 IPR001584 Integrase, catalytic core AMQ28_08910 IPR012337 Ribonuclease H-like superfamily AMQ28_08915 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMQ28_08915 IPR001387 Cro/C1-type helix-turn-helix domain AMQ28_08925 IPR025948 HTH-like domain AMQ28_08925 IPR001584 Integrase, catalytic core AMQ28_08925 IPR012337 Ribonuclease H-like superfamily AMQ28_08925 IPR036397 Ribonuclease H superfamily AMQ28_08940 IPR012337 Ribonuclease H-like superfamily AMQ28_08940 IPR036397 Ribonuclease H superfamily AMQ28_08940 IPR001584 Integrase, catalytic core AMQ28_08940 IPR025948 HTH-like domain AMQ28_08970 IPR009057 Homeobox-like domain superfamily AMQ28_08970 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_08970 IPR002514 Transposase IS3/IS911family AMQ28_08975 IPR025948 HTH-like domain AMQ28_08975 IPR001584 Integrase, catalytic core AMQ28_08975 IPR012337 Ribonuclease H-like superfamily AMQ28_08975 IPR036397 Ribonuclease H superfamily AMQ28_08980 IPR018298 Adrenodoxin, iron-sulphur binding site AMQ28_08980 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMQ28_08980 IPR012675 Beta-grasp domain superfamily AMQ28_08980 IPR001055 Adrenodoxin AMQ28_08980 IPR036010 2Fe-2S ferredoxin-like superfamily AMQ28_08985 IPR036396 Cytochrome P450 superfamily AMQ28_08985 IPR017972 Cytochrome P450, conserved site AMQ28_08985 IPR002397 Cytochrome P450, B-class AMQ28_08985 IPR001128 Cytochrome P450 AMQ28_08990 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_08990 IPR023753 FAD/NAD(P)-binding domain AMQ28_08990 IPR028202 Reductase, C-terminal AMQ28_08990 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMQ28_09010 IPR027805 Transposase, Helix-turn-helix domain AMQ28_09010 IPR027806 Harbinger transposase-derived nuclease domain AMQ28_09030 IPR011344 Single-stranded DNA-binding protein AMQ28_09030 IPR012340 Nucleic acid-binding, OB-fold AMQ28_09030 IPR000424 Primosome PriB/single-strand DNA-binding AMQ28_09040 IPR013766 Thioredoxin domain AMQ28_09040 IPR024706 Peroxiredoxin, AhpC-type AMQ28_09040 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AMQ28_09040 IPR036249 Thioredoxin-like superfamily AMQ28_09040 IPR019479 Peroxiredoxin, C-terminal AMQ28_09040 IPR017559 Alkyl hydroperoxide reductase subunit C AMQ28_09045 IPR011051 RmlC-like cupin domain superfamily AMQ28_09045 IPR014710 RmlC-like jelly roll fold AMQ28_09045 IPR003829 Pirin, N-terminal domain AMQ28_09045 IPR008778 Pirin, C-terminal domain AMQ28_09045 IPR012093 Pirin AMQ28_09050 IPR002937 Amine oxidase AMQ28_09050 IPR014103 Zeta-carotene desaturase AMQ28_09050 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_09070 IPR004550 L-asparaginase, type II AMQ28_09070 IPR027475 Asparaginase/glutaminase, active site 2 AMQ28_09070 IPR040919 Asparaginase/glutaminase, C-terminal AMQ28_09070 IPR037152 L-asparaginase, N-terminal domain superfamily AMQ28_09070 IPR027474 L-asparaginase, N-terminal AMQ28_09070 IPR006034 Asparaginase/glutaminase-like AMQ28_09070 IPR036152 Asparaginase/glutaminase-like superfamily AMQ28_09070 IPR027473 L-asparaginase, C-terminal AMQ28_09070 IPR020827 Asparaginase/glutaminase, active site 1 AMQ28_09085 IPR025948 HTH-like domain AMQ28_09085 IPR001584 Integrase, catalytic core AMQ28_09085 IPR036397 Ribonuclease H superfamily AMQ28_09085 IPR012337 Ribonuclease H-like superfamily AMQ28_09100 IPR003812 Fido domain AMQ28_09100 IPR026287 Protein adenylyltransferase SoFic-like AMQ28_09100 IPR040198 Fido domain-containing protein AMQ28_09100 IPR036597 Fido-like domain superfamily AMQ28_09100 IPR025758 Fic/DOC N-terminal AMQ28_09125 IPR003855 Potassium transporter AMQ28_09125 IPR023051 Potassium uptake protein, low affinity, Kup AMQ28_09155 IPR006062 Histidine biosynthesis AMQ28_09155 IPR013785 Aldolase-type TIM barrel AMQ28_09155 IPR011060 Ribulose-phosphate binding barrel AMQ28_09155 IPR004651 Histidine biosynthesis, HisF AMQ28_09160 IPR002575 Aminoglycoside phosphotransferase AMQ28_09160 IPR011009 Protein kinase-like domain superfamily AMQ28_09160 IPR005280 Homoserine kinase, type II AMQ28_09175 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA AMQ28_09175 IPR011060 Ribulose-phosphate binding barrel AMQ28_09175 IPR013785 Aldolase-type TIM barrel AMQ28_09175 IPR006062 Histidine biosynthesis AMQ28_09175 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase AMQ28_09185 IPR010139 Imidazole glycerol phosphate synthase, subunit H AMQ28_09185 IPR017926 Glutamine amidotransferase AMQ28_09185 IPR029062 Class I glutamine amidotransferase-like AMQ28_09190 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site AMQ28_09190 IPR000807 Imidazoleglycerol-phosphate dehydratase AMQ28_09190 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily AMQ28_09190 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_09230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_09230 IPR015985 Tellurite resistance methyltransferase TehB-like domain AMQ28_09230 IPR015392 Domain of unknown function DUF1971 AMQ28_09230 IPR004537 Tellurite resistance methyltransferase, TehB AMQ28_09230 IPR014710 RmlC-like jelly roll fold AMQ28_09230 IPR014431 Tellurite resistance methyltransferase, TehB type-2 AMQ28_09260 IPR036397 Ribonuclease H superfamily AMQ28_09260 IPR001598 Transposase, IS30, conserved site AMQ28_09260 IPR012337 Ribonuclease H-like superfamily AMQ28_09260 IPR025246 Transposase IS30-like HTH domain AMQ28_09260 IPR001584 Integrase, catalytic core AMQ28_09265 IPR012805 Acetyl-CoA C-acyltransferase FadA AMQ28_09265 IPR002155 Thiolase AMQ28_09265 IPR016039 Thiolase-like AMQ28_09265 IPR020615 Thiolase, acyl-enzyme intermediate active site AMQ28_09265 IPR020610 Thiolase, active site AMQ28_09265 IPR020617 Thiolase, C-terminal AMQ28_09265 IPR020616 Thiolase, N-terminal AMQ28_09265 IPR020613 Thiolase, conserved site AMQ28_09270 IPR036291 NAD(P)-binding domain superfamily AMQ28_09270 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AMQ28_09270 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMQ28_09270 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMQ28_09270 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMQ28_09270 IPR029045 ClpP/crotonase-like domain superfamily AMQ28_09270 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMQ28_09270 IPR001753 Enoyl-CoA hydratase/isomerase AMQ28_09270 IPR012799 Fatty oxidation complex, alpha subunit FadB AMQ28_09275 IPR038476 UvrC homology region 2 superfamily AMQ28_09275 IPR035901 GIY-YIG endonuclease superfamily AMQ28_09275 IPR001162 UvrC family homology region AMQ28_09275 IPR004791 UvrABC system, subunit C AMQ28_09275 IPR036876 UVR domain superfamily AMQ28_09275 IPR001943 UVR domain AMQ28_09275 IPR010994 RuvA domain 2-like AMQ28_09275 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AMQ28_09275 IPR000305 GIY-YIG endonuclease AMQ28_09285 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase AMQ28_09285 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial AMQ28_09285 IPR000462 CDP-alcohol phosphatidyltransferase AMQ28_09290 IPR007457 Fe(II) trafficking protein YggX AMQ28_09290 IPR036766 Fe(II) trafficking protein YggX superfamily AMQ28_09295 IPR008948 L-Aspartase-like AMQ28_09295 IPR022761 Fumarate lyase, N-terminal AMQ28_09295 IPR000362 Fumarate lyase family AMQ28_09295 IPR020557 Fumarate lyase, conserved site AMQ28_09295 IPR029419 Argininosuccinate lyase, C-terminal AMQ28_09295 IPR009049 Argininosuccinate lyase AMQ28_09295 IPR024083 Fumarase/histidase, N-terminal AMQ28_09300 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region AMQ28_09300 IPR010559 Signal transduction histidine kinase, internal region AMQ28_09300 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_09300 IPR029016 GAF-like domain superfamily AMQ28_09300 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_09305 IPR007492 LytTR DNA-binding domain AMQ28_09305 IPR011006 CheY-like superfamily AMQ28_09305 IPR001789 Signal transduction response regulator, receiver domain AMQ28_09310 IPR000860 Porphobilinogen deaminase AMQ28_09310 IPR022417 Porphobilinogen deaminase, N-terminal AMQ28_09310 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily AMQ28_09310 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site AMQ28_09310 IPR022418 Porphobilinogen deaminase, C-terminal AMQ28_09330 IPR029069 HotDog domain superfamily AMQ28_09330 IPR006683 Thioesterase domain AMQ28_09335 IPR027444 Histone-like protein H-NS, C-terminal domain AMQ28_09335 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily AMQ28_09335 IPR001801 Histone-like protein H-NS AMQ28_09350 IPR013356 Type II secretion system GspD AMQ28_09350 IPR004846 Type II/III secretion system AMQ28_09350 IPR038591 NolW-like superfamily AMQ28_09350 IPR005644 NolW-like AMQ28_09350 IPR001775 GspD/PilQ family AMQ28_09350 IPR004845 Type II secretion system GspD, conserved site AMQ28_09355 IPR008984 SMAD/FHA domain superfamily AMQ28_09355 IPR000253 Forkhead-associated (FHA) domain AMQ28_09355 IPR022128 Domain of unknown function DUF3662 AMQ28_09355 IPR042287 FhaA, N-terminal AMQ28_09360 IPR036412 HAD-like superfamily AMQ28_09360 IPR037512 Phosphoglycolate phosphatase, prokaryotic AMQ28_09360 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AMQ28_09360 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMQ28_09360 IPR023214 HAD superfamily AMQ28_09360 IPR041492 Haloacid dehalogenase-like hydrolase AMQ28_09360 IPR006439 HAD hydrolase, subfamily IA AMQ28_09365 IPR015890 Chorismate-utilising enzyme, C-terminal AMQ28_09365 IPR005801 ADC synthase AMQ28_09365 IPR019999 Anthranilate synthase component I-like AMQ28_09365 IPR006805 Anthranilate synthase component I, N-terminal AMQ28_09365 IPR005256 Anthranilate synthase component I, PabB-like AMQ28_09390 IPR005225 Small GTP-binding protein domain AMQ28_09390 IPR000795 Transcription factor, GTP-binding domain AMQ28_09390 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMQ28_09390 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AMQ28_09390 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMQ28_09390 IPR009000 Translation protein, beta-barrel domain superfamily AMQ28_09390 IPR004161 Translation elongation factor EFTu-like, domain 2 AMQ28_09390 IPR033720 Elongation factor Tu, domain 2 AMQ28_09390 IPR031157 Tr-type G domain, conserved site AMQ28_09390 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_09390 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AMQ28_09395 IPR038379 SecE superfamily AMQ28_09395 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit AMQ28_09395 IPR005807 SecE subunit of protein translocation complex, bacterial-like AMQ28_09400 IPR005824 KOW AMQ28_09400 IPR006645 NusG, N-terminal AMQ28_09400 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AMQ28_09400 IPR036735 NusG, N-terminal domain superfamily AMQ28_09400 IPR014722 Ribosomal protein L2, domain 2 AMQ28_09400 IPR008991 Translation protein SH3-like domain superfamily AMQ28_09400 IPR001062 Transcription antitermination protein, NusG AMQ28_09405 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AMQ28_09405 IPR006519 Ribosomal protein L11, bacterial-type AMQ28_09405 IPR000911 Ribosomal protein L11/L12 AMQ28_09405 IPR020783 Ribosomal protein L11, C-terminal AMQ28_09405 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AMQ28_09405 IPR020784 Ribosomal protein L11, N-terminal AMQ28_09405 IPR020785 Ribosomal protein L11, conserved site AMQ28_09410 IPR023674 Ribosomal protein L1-like AMQ28_09410 IPR002143 Ribosomal protein L1 AMQ28_09410 IPR005878 Ribosomal protein L1, bacterial-type AMQ28_09410 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AMQ28_09410 IPR023673 Ribosomal protein L1, conserved site AMQ28_09410 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AMQ28_09415 IPR022973 Ribosomal protein L10 AMQ28_09415 IPR001790 Ribosomal protein L10P AMQ28_09415 IPR002363 Ribosomal protein L10, eubacterial, conserved site AMQ28_09420 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMQ28_09420 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily AMQ28_09420 IPR000206 Ribosomal protein L7/L12 AMQ28_09420 IPR008932 Ribosomal protein L7/L12, oligomerisation AMQ28_09420 IPR013823 Ribosomal protein L7/L12, C-terminal AMQ28_09425 IPR014724 RNA polymerase Rpb2, OB-fold AMQ28_09425 IPR037034 RNA polymerase Rpb2, domain 2 superfamily AMQ28_09425 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain AMQ28_09425 IPR007642 RNA polymerase Rpb2, domain 2 AMQ28_09425 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain AMQ28_09425 IPR007641 RNA polymerase Rpb2, domain 7 AMQ28_09425 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily AMQ28_09425 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type AMQ28_09425 IPR007121 RNA polymerase, beta subunit, conserved site AMQ28_09425 IPR007644 RNA polymerase, beta subunit, protrusion AMQ28_09425 IPR015712 DNA-directed RNA polymerase, subunit 2 AMQ28_09425 IPR007645 RNA polymerase Rpb2, domain 3 AMQ28_09430 IPR042102 RNA polymerase Rpb1, domain 3 superfamily AMQ28_09430 IPR007081 RNA polymerase Rpb1, domain 5 AMQ28_09430 IPR007083 RNA polymerase Rpb1, domain 4 AMQ28_09430 IPR007066 RNA polymerase Rpb1, domain 3 AMQ28_09430 IPR007080 RNA polymerase Rpb1, domain 1 AMQ28_09430 IPR006592 RNA polymerase, N-terminal AMQ28_09430 IPR012754 DNA-directed RNA polymerase, subunit beta-prime AMQ28_09430 IPR038120 RNA polymerase Rpb1, funnel domain superfamily AMQ28_09430 IPR000722 RNA polymerase, alpha subunit AMQ28_09445 IPR029058 Alpha/Beta hydrolase fold AMQ28_09445 IPR000073 Alpha/beta hydrolase fold-1 AMQ28_09445 IPR000639 Epoxide hydrolase-like AMQ28_09450 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal AMQ28_09450 IPR032813 Putative Na+/H+ antiporter, N-terminal AMQ28_09455 IPR025668 Transposase DDE domain AMQ28_09470 IPR037196 HSP90, C-terminal domain AMQ28_09470 IPR020575 Heat shock protein Hsp90, N-terminal AMQ28_09470 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_09470 IPR001404 Heat shock protein Hsp90 family AMQ28_09470 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_09470 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_09500 IPR001853 DSBA-like thioredoxin domain AMQ28_09500 IPR036249 Thioredoxin-like superfamily AMQ28_09510 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain AMQ28_09510 IPR017821 Succinate CoA transferase AMQ28_09510 IPR037171 NagB/RpiA transferase-like AMQ28_09510 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily AMQ28_09510 IPR003702 Acetyl-CoA hydrolase/transferase AMQ28_09515 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_09515 IPR005467 Histidine kinase domain AMQ28_09515 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMQ28_09515 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMQ28_09515 IPR003660 HAMP domain AMQ28_09515 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_09515 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMQ28_09520 IPR016032 Signal transduction response regulator, C-terminal effector AMQ28_09520 IPR011006 CheY-like superfamily AMQ28_09520 IPR001867 OmpR/PhoB-type DNA-binding domain AMQ28_09520 IPR039420 Transcriptional regulatory protein WalR-like AMQ28_09520 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_09520 IPR001789 Signal transduction response regulator, receiver domain AMQ28_09525 IPR037027 YqgF/RNase H-like domain superfamily AMQ28_09525 IPR010994 RuvA domain 2-like AMQ28_09525 IPR032639 Tex protein, YqgF-like domain AMQ28_09525 IPR023323 Tex-like domain superfamily AMQ28_09525 IPR006641 YqgF/RNase H-like domain AMQ28_09525 IPR012340 Nucleic acid-binding, OB-fold AMQ28_09525 IPR003029 S1 domain AMQ28_09525 IPR023319 Tex-like protein, HTH domain superfamily AMQ28_09525 IPR018974 Tex-like protein, N-terminal AMQ28_09525 IPR041692 HHH domain 9 AMQ28_09525 IPR012337 Ribonuclease H-like superfamily AMQ28_09525 IPR022967 RNA-binding domain, S1 AMQ28_09535 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMQ28_09535 IPR036291 NAD(P)-binding domain superfamily AMQ28_09535 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_09540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_09540 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_09540 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase AMQ28_09540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_09540 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AMQ28_09545 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_09545 IPR003439 ABC transporter-like AMQ28_09545 IPR032781 ABC-transporter extension domain AMQ28_09545 IPR017871 ABC transporter, conserved site AMQ28_09545 IPR022374 Energy-dependent translational throttle protein EttA AMQ28_09545 IPR003593 AAA+ ATPase domain AMQ28_09570 IPR036670 SecA, preprotein cross-linking domain superfamily AMQ28_09570 IPR011116 SecA Wing/Scaffold AMQ28_09570 IPR036266 SecA, Wing/Scaffold superfamily AMQ28_09570 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_09570 IPR000185 Protein translocase subunit SecA AMQ28_09570 IPR011115 SecA DEAD-like, N-terminal AMQ28_09570 IPR004027 SEC-C motif AMQ28_09570 IPR020937 SecA conserved site AMQ28_09570 IPR014018 SecA motor DEAD AMQ28_09570 IPR011130 SecA, preprotein cross-linking domain AMQ28_09575 IPR036397 Ribonuclease H superfamily AMQ28_09575 IPR025948 HTH-like domain AMQ28_09575 IPR001584 Integrase, catalytic core AMQ28_09575 IPR012337 Ribonuclease H-like superfamily AMQ28_09580 IPR002514 Transposase IS3/IS911family AMQ28_09580 IPR009057 Homeobox-like domain superfamily AMQ28_09580 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_09625 IPR002524 Cation efflux protein AMQ28_09625 IPR036837 Cation efflux protein, cytoplasmic domain superfamily AMQ28_09625 IPR027469 Cation efflux transmembrane domain superfamily AMQ28_09630 IPR025948 HTH-like domain AMQ28_09630 IPR001584 Integrase, catalytic core AMQ28_09630 IPR012337 Ribonuclease H-like superfamily AMQ28_09630 IPR036397 Ribonuclease H superfamily AMQ28_09660 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_09660 IPR033910 Glutamyl-tRNA synthetase AMQ28_09660 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 AMQ28_09660 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AMQ28_09660 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding AMQ28_09660 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AMQ28_09660 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial AMQ28_09660 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMQ28_09670 IPR000957 Sulphate/thiosulphate-binding, conserved site AMQ28_09670 IPR034408 Sulphate/thiosulphate-binding site AMQ28_09670 IPR005669 Thiosulphate/Sulfate-binding protein AMQ28_09675 IPR005669 Thiosulphate/Sulfate-binding protein AMQ28_09675 IPR034408 Sulphate/thiosulphate-binding site AMQ28_09675 IPR000957 Sulphate/thiosulphate-binding, conserved site AMQ28_09680 IPR002903 Ribosomal RNA small subunit methyltransferase H AMQ28_09680 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily AMQ28_09680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_09690 IPR036138 Penicillin-binding protein, dimerisation domain superfamily AMQ28_09690 IPR005311 Penicillin-binding protein, dimerisation domain AMQ28_09690 IPR037532 Peptidoglycan D,D-transpeptidase FtsI AMQ28_09690 IPR012338 Beta-lactamase/transpeptidase-like AMQ28_09690 IPR001460 Penicillin-binding protein, transpeptidase AMQ28_09695 IPR036615 Mur ligase, C-terminal domain superfamily AMQ28_09695 IPR013221 Mur ligase, central AMQ28_09695 IPR000713 Mur ligase, N-terminal catalytic domain AMQ28_09695 IPR035911 MurE/MurF, N-terminal AMQ28_09695 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase AMQ28_09695 IPR004101 Mur ligase, C-terminal AMQ28_09695 IPR036565 Mur-like, catalytic domain superfamily AMQ28_09700 IPR036565 Mur-like, catalytic domain superfamily AMQ28_09700 IPR013221 Mur ligase, central AMQ28_09700 IPR036615 Mur ligase, C-terminal domain superfamily AMQ28_09700 IPR004101 Mur ligase, C-terminal AMQ28_09700 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase AMQ28_09700 IPR035911 MurE/MurF, N-terminal AMQ28_09700 IPR000713 Mur ligase, N-terminal catalytic domain AMQ28_09705 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site AMQ28_09705 IPR000715 Glycosyl transferase, family 4 AMQ28_09705 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase AMQ28_09710 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted AMQ28_09710 IPR025714 Methyltransferase domain AMQ28_09710 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_09715 IPR001460 Penicillin-binding protein, transpeptidase AMQ28_09715 IPR012338 Beta-lactamase/transpeptidase-like AMQ28_09715 IPR036950 Penicillin binding protein transglycosylase domain AMQ28_09715 IPR023346 Lysozyme-like domain superfamily AMQ28_09715 IPR001264 Glycosyl transferase, family 51 AMQ28_09715 IPR031376 Penicillin-binding protein, OB-like domain AMQ28_09740 IPR021731 AMIN domain AMQ28_09740 IPR001775 GspD/PilQ family AMQ28_09740 IPR005644 NolW-like AMQ28_09740 IPR038591 NolW-like superfamily AMQ28_09740 IPR011662 Secretin/TonB, short N-terminal domain AMQ28_09740 IPR013355 Type IV pilus secretin PilQ AMQ28_09740 IPR004846 Type II/III secretion system AMQ28_09740 IPR004845 Type II secretion system GspD, conserved site AMQ28_09745 IPR031322 Shikimate kinase/gluconokinase AMQ28_09745 IPR023000 Shikimate kinase, conserved site AMQ28_09745 IPR000623 Shikimate kinase/Threonine synthase-like 1 AMQ28_09745 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_09750 IPR016037 3-dehydroquinate synthase AroB AMQ28_09750 IPR030963 3-dehydroquinate synthase family AMQ28_09750 IPR030960 3-dehydroquinate synthase domain AMQ28_09760 IPR002932 Glutamate synthase domain AMQ28_09760 IPR006982 Glutamate synthase, central-N AMQ28_09760 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily AMQ28_09760 IPR029055 Nucleophile aminohydrolases, N-terminal AMQ28_09760 IPR013785 Aldolase-type TIM barrel AMQ28_09760 IPR002489 Glutamate synthase, alpha subunit, C-terminal AMQ28_09760 IPR017932 Glutamine amidotransferase type 2 domain AMQ28_09765 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 AMQ28_09765 IPR023753 FAD/NAD(P)-binding domain AMQ28_09765 IPR028261 Dihydroprymidine dehydrogenase domain II AMQ28_09765 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_09765 IPR009051 Alpha-helical ferredoxin AMQ28_09775 IPR023353 LemA-like domain superfamily AMQ28_09775 IPR007156 LemA AMQ28_09780 IPR007621 TPM domain AMQ28_09790 IPR012902 Prokaryotic N-terminal methylation site AMQ28_09790 IPR001082 Fimbrial protein pilin AMQ28_09805 IPR031726 Protein glycosylation ligase domain AMQ28_09805 IPR021797 Virulence factor membrane-bound polymerase, C-terminal AMQ28_09805 IPR007016 O-antigen ligase-related AMQ28_09810 IPR002024 Bacterioferritin AMQ28_09810 IPR012347 Ferritin-like AMQ28_09810 IPR009078 Ferritin-like superfamily AMQ28_09810 IPR009040 Ferritin-like diiron domain AMQ28_09810 IPR008331 Ferritin/DPS protein domain AMQ28_09815 IPR007419 BFD-like [2Fe-2S]-binding domain AMQ28_09815 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMQ28_09820 IPR006056 RidA family AMQ28_09820 IPR019897 RidA, conserved site AMQ28_09820 IPR035959 RutC-like superfamily AMQ28_09820 IPR006175 YjgF/YER057c/UK114 family AMQ28_09825 IPR004095 TGS AMQ28_09825 IPR002912 ACT domain AMQ28_09825 IPR012675 Beta-grasp domain superfamily AMQ28_09825 IPR003607 HD/PDEase domain AMQ28_09825 IPR004811 RelA/SpoT family AMQ28_09825 IPR033655 RelA, TGS domain AMQ28_09825 IPR007685 RelA/SpoT AMQ28_09825 IPR012676 TGS-like AMQ28_09830 IPR006110 RNA polymerase, subunit omega/K/RPB6 AMQ28_09830 IPR036161 RPB6/omega subunit-like superfamily AMQ28_09830 IPR012293 RNA polymerase subunit, RPB6/omega AMQ28_09830 IPR003716 DNA-directed RNA polymerase, omega subunit AMQ28_09835 IPR020590 Guanylate kinase, conserved site AMQ28_09835 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_09835 IPR008144 Guanylate kinase-like domain AMQ28_09835 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMQ28_09835 IPR017665 Guanylate kinase AMQ28_09840 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase AMQ28_09845 IPR012902 Prokaryotic N-terminal methylation site AMQ28_09845 IPR001082 Fimbrial protein pilin AMQ28_09845 IPR000983 Bacterial general secretion pathway protein G-type pilin AMQ28_09880 IPR023803 Ribosomal protein S16 domain superfamily AMQ28_09880 IPR020592 Ribosomal protein S16, conserved site AMQ28_09880 IPR000307 Ribosomal protein S16 AMQ28_09885 IPR011961 16S rRNA processing protein RimM AMQ28_09885 IPR036976 RimM, N-terminal domain superfamily AMQ28_09885 IPR027275 PRC-barrel domain AMQ28_09885 IPR011033 PRC-barrel-like superfamily AMQ28_09885 IPR009000 Translation protein, beta-barrel domain superfamily AMQ28_09885 IPR002676 RimM, N-terminal AMQ28_09890 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMQ28_09890 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain AMQ28_09890 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria AMQ28_09890 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal AMQ28_09890 IPR029028 Alpha/beta knot methyltransferases AMQ28_09895 IPR008991 Translation protein SH3-like domain superfamily AMQ28_09895 IPR018257 Ribosomal protein L19, conserved site AMQ28_09895 IPR001857 Ribosomal protein L19 AMQ28_09895 IPR038657 Ribosomal protein L19 superfamily AMQ28_09900 IPR000073 Alpha/beta hydrolase fold-1 AMQ28_09900 IPR029058 Alpha/Beta hydrolase fold AMQ28_09905 IPR000073 Alpha/beta hydrolase fold-1 AMQ28_09905 IPR029058 Alpha/Beta hydrolase fold AMQ28_09910 IPR004961 Lipase chaperone AMQ28_09915 IPR014780 tRNA pseudouridine synthase II, TruB AMQ28_09915 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal AMQ28_09915 IPR015947 PUA-like superfamily AMQ28_09915 IPR002501 Pseudouridine synthase II, N-terminal AMQ28_09915 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMQ28_09915 IPR032819 tRNA pseudouridylate synthase B, C-terminal AMQ28_09920 IPR002781 Transmembrane protein TauE-like AMQ28_09930 IPR000620 EamA domain AMQ28_09935 IPR000620 EamA domain AMQ28_09940 IPR002912 ACT domain AMQ28_09940 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMQ28_09940 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMQ28_09940 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMQ28_09940 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMQ28_09940 IPR036291 NAD(P)-binding domain superfamily AMQ28_09945 IPR006094 FAD linked oxidase, N-terminal AMQ28_09945 IPR004490 Glycolate oxidase subunit GlcD AMQ28_09945 IPR004113 FAD-linked oxidase, C-terminal AMQ28_09945 IPR036318 FAD-binding, type PCMH-like superfamily AMQ28_09945 IPR016166 FAD-binding domain, PCMH-type AMQ28_09945 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMQ28_09945 IPR016164 FAD-linked oxidase-like, C-terminal AMQ28_09955 IPR005829 Sugar transporter, conserved site AMQ28_09955 IPR011701 Major facilitator superfamily AMQ28_09955 IPR036259 MFS transporter superfamily AMQ28_09955 IPR020846 Major facilitator superfamily domain AMQ28_09960 IPR032692 Integral membrane protein YccS, N-terminal AMQ28_09960 IPR010019 Integral membrane protein, YccS AMQ28_09960 IPR010020 Integral membrane protein, YccS/YhfK AMQ28_09965 IPR001424 Superoxide dismutase, copper/zinc binding domain AMQ28_09965 IPR018152 Superoxide dismutase, copper/zinc, binding site AMQ28_09965 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone AMQ28_09965 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily AMQ28_09970 IPR002549 Transmembrane protein TqsA-like AMQ28_09975 IPR025669 AAA domain AMQ28_09975 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_09985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_09985 IPR004033 UbiE/COQ5 methyltransferase AMQ28_09985 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMQ28_10005 IPR003691 Putative fluoride ion transporter CrcB AMQ28_10010 IPR042105 Ribosomal protein L31 superfamily AMQ28_10010 IPR034704 L28p-like AMQ28_10010 IPR002150 Ribosomal protein L31 AMQ28_10010 IPR027493 Ribosomal protein L31 type B AMQ28_10015 IPR000719 Protein kinase domain AMQ28_10015 IPR011009 Protein kinase-like domain superfamily AMQ28_10015 IPR004147 UbiB domain AMQ28_10020 IPR002528 Multi antimicrobial extrusion protein AMQ28_10030 IPR023404 Radical SAM, alpha/beta horseshoe AMQ28_10030 IPR007197 Radical SAM AMQ28_10030 IPR004559 Heme chaperone HemW-like AMQ28_10030 IPR034505 Anaerobic coproporphyrinogen-III oxidase AMQ28_10030 IPR006638 Elp3/MiaB/NifB AMQ28_10030 IPR010723 HemN, C-terminal AMQ28_10035 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMQ28_10035 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMQ28_10035 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMQ28_10035 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMQ28_10035 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMQ28_10035 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMQ28_10035 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMQ28_10040 IPR011342 Shikimate dehydrogenase AMQ28_10040 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AMQ28_10040 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal AMQ28_10040 IPR022893 Shikimate dehydrogenase family AMQ28_10040 IPR041121 SDH, C-terminal AMQ28_10040 IPR036291 NAD(P)-binding domain superfamily AMQ28_10055 IPR036144 RibA-like superfamily AMQ28_10055 IPR032677 GTP cyclohydrolase II AMQ28_10055 IPR000926 GTP cyclohydrolase II, RibA AMQ28_10060 IPR005475 Transketolase-like, pyrimidine-binding domain AMQ28_10060 IPR033248 Transketolase, C-terminal domain AMQ28_10060 IPR029061 Thiamin diphosphate-binding fold AMQ28_10060 IPR005477 Deoxyxylulose-5-phosphate synthase AMQ28_10060 IPR020826 Transketolase binding site AMQ28_10060 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMQ28_10065 IPR022337 Inositol monophosphatase, SuhB AMQ28_10065 IPR020550 Inositol monophosphatase, conserved site AMQ28_10065 IPR000760 Inositol monophosphatase-like AMQ28_10065 IPR033942 Inositol monophosphatase AMQ28_10065 IPR020583 Inositol monophosphatase, metal-binding site AMQ28_10070 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMQ28_10070 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMQ28_10070 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_10070 IPR028622 ATP-dependent RNA helicase RhlE AMQ28_10070 IPR001650 Helicase, C-terminal AMQ28_10070 IPR011545 DEAD/DEAH box helicase domain AMQ28_10070 IPR014014 RNA helicase, DEAD-box type, Q motif AMQ28_10075 IPR003439 ABC transporter-like AMQ28_10075 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_10075 IPR003593 AAA+ ATPase domain AMQ28_10075 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl AMQ28_10075 IPR017871 ABC transporter, conserved site AMQ28_10080 IPR030802 ABC transporter permease MalE AMQ28_10080 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AMQ28_10085 IPR003399 Mce/MlaD AMQ28_10085 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD AMQ28_10090 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AMQ28_10090 IPR042245 Tgt2/MlaC superfamily AMQ28_10100 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB AMQ28_10100 IPR004488 Magnesium/cobalt transport protein CorA AMQ28_10105 IPR031100 LOG family AMQ28_10105 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AMQ28_10115 IPR029057 Phosphoribosyltransferase-like AMQ28_10115 IPR000836 Phosphoribosyltransferase domain AMQ28_10115 IPR005222 Competence protein ComF AMQ28_10120 IPR011545 DEAD/DEAH box helicase domain AMQ28_10120 IPR033454 RecG, wedge domain AMQ28_10120 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_10120 IPR012340 Nucleic acid-binding, OB-fold AMQ28_10120 IPR001650 Helicase, C-terminal AMQ28_10120 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMQ28_10120 IPR004609 ATP-dependent DNA helicase RecG AMQ28_10130 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase AMQ28_10130 IPR041728 GPAT/DHAPAT, acyltransferase domain AMQ28_10130 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB AMQ28_10130 IPR002123 Phospholipid/glycerol acyltransferase AMQ28_10135 IPR003703 Acyl-CoA thioesterase AMQ28_10135 IPR029069 HotDog domain superfamily AMQ28_10140 IPR036458 Sodium:dicarboxylate symporter superfamily AMQ28_10140 IPR018107 Sodium:dicarboxylate symporter, conserved site AMQ28_10140 IPR001991 Sodium:dicarboxylate symporter AMQ28_10140 IPR033380 Glutamate-aspartate symport protein GltP/GltT AMQ28_10140 IPR034703 Proton/glutamate-aspartate symporter GltP AMQ28_10150 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_10150 IPR006073 GTP binding domain AMQ28_10150 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC AMQ28_10150 IPR030393 EngB-type guanine nucleotide-binding (G) domain AMQ28_10155 IPR030489 Transcription regulator Rrf2-type, conserved site AMQ28_10155 IPR000944 Transcription regulator Rrf2-type AMQ28_10155 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_10155 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_10160 IPR017938 Riboflavin synthase-like beta-barrel AMQ28_10160 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMQ28_10160 IPR017927 FAD-binding domain, ferredoxin reductase-type AMQ28_10160 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMQ28_10160 IPR000971 Globin AMQ28_10160 IPR009050 Globin-like superfamily AMQ28_10160 IPR012292 Globin/Protoglobin AMQ28_10160 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMQ28_10160 IPR023950 Flavohemoprotein AMQ28_10165 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_10165 IPR033186 Helicase HerA-like C-terminal AMQ28_10170 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_10170 IPR006237 L-methionine gamma-lyase AMQ28_10170 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AMQ28_10170 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_10170 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_10175 IPR029062 Class I glutamine amidotransferase-like AMQ28_10175 IPR022955 GMP synthase AMQ28_10175 IPR001674 GMP synthase, C-terminal AMQ28_10175 IPR004739 GMP synthase, glutamine amidotransferase AMQ28_10175 IPR025777 GMP synthetase ATP pyrophosphatase domain AMQ28_10175 IPR022310 NAD/GMP synthase AMQ28_10175 IPR017926 Glutamine amidotransferase AMQ28_10175 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_10180 IPR001848 Ribosomal protein S10 AMQ28_10180 IPR018268 Ribosomal protein S10, conserved site AMQ28_10180 IPR036838 Ribosomal protein S10 domain superfamily AMQ28_10180 IPR027486 Ribosomal protein S10 domain AMQ28_10185 IPR000597 Ribosomal protein L3 AMQ28_10185 IPR019927 Ribosomal protein L3, bacterial/organelle-type AMQ28_10185 IPR019926 Ribosomal protein L3, conserved site AMQ28_10185 IPR009000 Translation protein, beta-barrel domain superfamily AMQ28_10190 IPR013005 50S ribosomal protein uL4 AMQ28_10190 IPR002136 Ribosomal protein L4/L1e AMQ28_10190 IPR023574 Ribosomal protein L4 domain superfamily AMQ28_10195 IPR013025 Ribosomal protein L25/L23 AMQ28_10195 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMQ28_10195 IPR012678 Ribosomal protein L23/L15e core domain superfamily AMQ28_10200 IPR022669 Ribosomal protein L2, C-terminal AMQ28_10200 IPR012340 Nucleic acid-binding, OB-fold AMQ28_10200 IPR014726 Ribosomal protein L2, domain 3 AMQ28_10200 IPR022666 Ribosomal Proteins L2, RNA binding domain AMQ28_10200 IPR014722 Ribosomal protein L2, domain 2 AMQ28_10200 IPR002171 Ribosomal protein L2 AMQ28_10200 IPR005880 Ribosomal protein L2, bacterial/organellar-type AMQ28_10200 IPR008991 Translation protein SH3-like domain superfamily AMQ28_10205 IPR023575 Ribosomal protein S19, superfamily AMQ28_10205 IPR020934 Ribosomal protein S19 conserved site AMQ28_10205 IPR005732 Ribosomal protein S19, bacterial-type AMQ28_10205 IPR002222 Ribosomal protein S19/S15 AMQ28_10210 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type AMQ28_10210 IPR036394 Ribosomal protein L22/L17 superfamily AMQ28_10210 IPR001063 Ribosomal protein L22/L17 AMQ28_10210 IPR018260 Ribosomal protein L22/L17, conserved site AMQ28_10215 IPR036419 Ribosomal protein S3, C-terminal domain superfamily AMQ28_10215 IPR015946 K homology domain-like, alpha/beta AMQ28_10215 IPR018280 Ribosomal protein S3, conserved site AMQ28_10215 IPR004044 K Homology domain, type 2 AMQ28_10215 IPR009019 K homology domain superfamily, prokaryotic type AMQ28_10215 IPR005704 Ribosomal protein S3, bacterial-type AMQ28_10215 IPR001351 Ribosomal protein S3, C-terminal AMQ28_10215 IPR004087 K Homology domain AMQ28_10220 IPR020798 Ribosomal protein L16, conserved site AMQ28_10220 IPR000114 Ribosomal protein L16 AMQ28_10220 IPR036920 Ribosomal protein L10e/L16 superfamily AMQ28_10220 IPR016180 Ribosomal protein L10e/L16 AMQ28_10225 IPR036049 Ribosomal protein L29/L35 superfamily AMQ28_10225 IPR001854 Ribosomal protein L29/L35 AMQ28_10230 IPR019984 30S ribosomal protein S17 AMQ28_10230 IPR012340 Nucleic acid-binding, OB-fold AMQ28_10230 IPR019979 Ribosomal protein S17, conserved site AMQ28_10230 IPR000266 Ribosomal protein S17/S11 AMQ28_10235 IPR005745 Ribosomal protein L14P, bacterial-type AMQ28_10235 IPR000218 Ribosomal protein L14P AMQ28_10235 IPR036853 Ribosomal protein L14 superfamily AMQ28_10235 IPR019972 Ribosomal protein L14P, conserved site AMQ28_10240 IPR005824 KOW AMQ28_10240 IPR041988 Ribosomal Protein L26/L24, KOW domain AMQ28_10240 IPR014722 Ribosomal protein L2, domain 2 AMQ28_10240 IPR008991 Translation protein SH3-like domain superfamily AMQ28_10240 IPR005825 Ribosomal protein L24/L26, conserved site AMQ28_10240 IPR003256 Ribosomal protein L24 AMQ28_10245 IPR020930 Ribosomal protein L5, bacterial-type AMQ28_10245 IPR031310 Ribosomal protein L5, N-terminal AMQ28_10245 IPR022803 Ribosomal protein L5 domain superfamily AMQ28_10245 IPR020929 Ribosomal protein L5, conserved site AMQ28_10245 IPR002132 Ribosomal protein L5 AMQ28_10245 IPR031309 Ribosomal protein L5, C-terminal AMQ28_10250 IPR018271 Ribosomal protein S14, conserved site AMQ28_10250 IPR001209 Ribosomal protein S14 AMQ28_10250 IPR023036 Ribosomal protein S14, bacterial/plastid AMQ28_10255 IPR035987 Ribosomal protein S8 superfamily AMQ28_10255 IPR000630 Ribosomal protein S8 AMQ28_10260 IPR002358 Ribosomal protein L6, conserved site AMQ28_10260 IPR020040 Ribosomal protein L6, alpha-beta domain AMQ28_10260 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily AMQ28_10260 IPR019906 Ribosomal protein L6, bacterial-type AMQ28_10260 IPR000702 Ribosomal protein L6 AMQ28_10265 IPR005484 Ribosomal protein L18 AMQ28_10265 IPR004389 Ribosomal protein L18, bacterial-type AMQ28_10270 IPR005712 Ribosomal protein S5, bacterial-type AMQ28_10270 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_10270 IPR000851 Ribosomal protein S5 AMQ28_10270 IPR013810 Ribosomal protein S5, N-terminal AMQ28_10270 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMQ28_10270 IPR018192 Ribosomal protein S5, N-terminal, conserved site AMQ28_10270 IPR005324 Ribosomal protein S5, C-terminal AMQ28_10275 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMQ28_10275 IPR005996 Ribosomal protein L30, bacterial-type AMQ28_10275 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AMQ28_10280 IPR021131 Ribosomal protein L18e/L15P AMQ28_10280 IPR001196 Ribosomal protein L15, conserved site AMQ28_10280 IPR005749 Ribosomal protein L15, bacterial-type AMQ28_10280 IPR030878 Ribosomal protein L15 AMQ28_10280 IPR036227 Ribosomal L18e/L15P superfamily AMQ28_10285 IPR023201 SecY domain superfamily AMQ28_10285 IPR030659 SecY conserved site AMQ28_10285 IPR026593 Protein translocase subunit SecY AMQ28_10285 IPR002208 SecY/SEC61-alpha family AMQ28_10290 IPR035977 Ribosomal protein L36 superfamily AMQ28_10290 IPR000473 Ribosomal protein L36 AMQ28_10295 IPR001892 Ribosomal protein S13 AMQ28_10295 IPR010979 Ribosomal protein S13-like, H2TH AMQ28_10295 IPR019980 Ribosomal protein S13, bacterial-type AMQ28_10295 IPR018269 Ribosomal protein S13, conserved site AMQ28_10295 IPR027437 30s ribosomal protein S13, C-terminal AMQ28_10300 IPR036967 Ribosomal protein S11 superfamily AMQ28_10300 IPR001971 Ribosomal protein S11 AMQ28_10300 IPR018102 Ribosomal S11, conserved site AMQ28_10300 IPR019981 Ribosomal protein S11, bacterial-type AMQ28_10305 IPR005709 Ribosomal protein S4, bacterial-type AMQ28_10305 IPR002942 RNA-binding S4 domain AMQ28_10305 IPR022801 Ribosomal protein S4/S9 AMQ28_10305 IPR001912 Ribosomal protein S4/S9, N-terminal AMQ28_10305 IPR036986 RNA-binding S4 domain superfamily AMQ28_10305 IPR018079 Ribosomal protein S4, conserved site AMQ28_10310 IPR036603 RNA polymerase, RBP11-like subunit AMQ28_10310 IPR036643 DNA-directed RNA polymerase, insert domain superfamily AMQ28_10310 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type AMQ28_10310 IPR011262 DNA-directed RNA polymerase, insert domain AMQ28_10310 IPR011260 RNA polymerase, alpha subunit, C-terminal AMQ28_10310 IPR011773 DNA-directed RNA polymerase, alpha subunit AMQ28_10315 IPR036373 Ribosomal protein L17 superfamily AMQ28_10315 IPR000456 Ribosomal protein L17 AMQ28_10320 IPR020946 Flavin monooxygenase-like AMQ28_10320 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_10325 IPR006089 Acyl-CoA dehydrogenase, conserved site AMQ28_10325 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMQ28_10325 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMQ28_10325 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMQ28_10325 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMQ28_10325 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMQ28_10325 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMQ28_10330 IPR005631 Flavinator of succinate dehydrogenase AMQ28_10330 IPR036714 Flavinator of succinate dehydrogenase superfamily AMQ28_10360 IPR012658 Conserved hypothetical protein CHP02443 AMQ28_10365 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AMQ28_10365 IPR001567 Peptidase M3A/M3B catalytic domain AMQ28_10370 IPR022966 Ribonuclease II/R, conserved site AMQ28_10370 IPR040476 RNase II/RNase R, cold shock domain AMQ28_10370 IPR012340 Nucleic acid-binding, OB-fold AMQ28_10370 IPR003029 S1 domain AMQ28_10370 IPR022967 RNA-binding domain, S1 AMQ28_10370 IPR013668 Ribonuclease R winged-helix domain AMQ28_10370 IPR011129 Cold shock domain AMQ28_10370 IPR004476 Ribonuclease II/ribonuclease R AMQ28_10370 IPR001900 Ribonuclease II/R AMQ28_10370 IPR011805 Ribonuclease R AMQ28_10370 IPR013223 Ribonuclease B, N-terminal OB domain AMQ28_10405 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AMQ28_10405 IPR011234 Fumarylacetoacetase-like, C-terminal AMQ28_10410 IPR017039 Virulence factor BrkB AMQ28_10410 IPR023679 Uncharacterised protein family UPF0761, bacterial AMQ28_10415 IPR029039 Flavoprotein-like superfamily AMQ28_10415 IPR008254 Flavodoxin/nitric oxide synthase AMQ28_10415 IPR010089 Flavoprotein WrbA-like AMQ28_10415 IPR005025 NADPH-dependent FMN reductase-like AMQ28_10415 IPR001226 Flavodoxin, conserved site AMQ28_10430 IPR010079 Xanthine phosphoribosyltransferase AMQ28_10430 IPR000836 Phosphoribosyltransferase domain AMQ28_10430 IPR029057 Phosphoribosyltransferase-like AMQ28_10455 IPR023091 Metalloprotease catalytic domain superfamily, predicted AMQ28_10455 IPR020549 Endoribonuclease YbeY, conserved site AMQ28_10455 IPR002036 Endoribonuclease YbeY AMQ28_10460 IPR003714 PhoH-like protein AMQ28_10460 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_10465 IPR013848 Methylthiotransferase, N-terminal AMQ28_10465 IPR007197 Radical SAM AMQ28_10465 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB AMQ28_10465 IPR005839 Methylthiotransferase AMQ28_10465 IPR002792 TRAM domain AMQ28_10465 IPR023404 Radical SAM, alpha/beta horseshoe AMQ28_10465 IPR006638 Elp3/MiaB/NifB AMQ28_10465 IPR020612 Methylthiotransferase, conserved site AMQ28_10465 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMQ28_10470 IPR023346 Lysozyme-like domain superfamily AMQ28_10470 IPR000189 Prokaryotic transglycosylase, active site AMQ28_10470 IPR008258 Transglycosylase SLT domain 1 AMQ28_10470 IPR011055 Duplicated hybrid motif AMQ28_10470 IPR016047 Peptidase M23 AMQ28_10470 IPR010090 Phage tail tape measure protein AMQ28_10480 IPR001557 L-lactate/malate dehydrogenase AMQ28_10480 IPR022383 Lactate/malate dehydrogenase, C-terminal AMQ28_10480 IPR001236 Lactate/malate dehydrogenase, N-terminal AMQ28_10480 IPR010945 Malate dehydrogenase, type 2 AMQ28_10480 IPR036291 NAD(P)-binding domain superfamily AMQ28_10480 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AMQ28_10505 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMQ28_10505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_10505 IPR007473 Ribosomal RNA large subunit methyltransferase J AMQ28_10510 IPR000462 CDP-alcohol phosphatidyltransferase AMQ28_10510 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase AMQ28_10555 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMQ28_10555 IPR001279 Metallo-beta-lactamase AMQ28_10555 IPR005939 Beta-lactamase hydrolase-like AMQ28_10555 IPR029021 Protein-tyrosine phosphatase-like AMQ28_10565 IPR017937 Thioredoxin, conserved site AMQ28_10565 IPR005746 Thioredoxin AMQ28_10565 IPR036249 Thioredoxin-like superfamily AMQ28_10565 IPR013766 Thioredoxin domain AMQ28_10570 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase AMQ28_10570 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain AMQ28_10570 IPR006683 Thioesterase domain AMQ28_10570 IPR029069 HotDog domain superfamily AMQ28_10580 IPR035570 UPF0234, N-terminal AMQ28_10580 IPR036183 YajQ-like superfamily AMQ28_10580 IPR007551 Protein of unknown function DUF520 AMQ28_10580 IPR035571 UPF0234-like, C-terminal AMQ28_10590 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal AMQ28_10590 IPR006076 FAD dependent oxidoreductase AMQ28_10590 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC AMQ28_10590 IPR008471 MnmC-like methyltransferase AMQ28_10590 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_10605 IPR006008 Intracellular septation protein A AMQ28_10615 IPR021134 Bestrophin/UPF0187 AMQ28_10620 IPR037518 MPN domain AMQ28_10620 IPR025657 RadC-like JAB domain AMQ28_10620 IPR010994 RuvA domain 2-like AMQ28_10620 IPR001405 Uncharacterised protein family UPF0758 AMQ28_10625 IPR036551 Flavin prenyltransferase-like AMQ28_10625 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal AMQ28_10625 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC AMQ28_10625 IPR003382 Flavoprotein AMQ28_10625 IPR035929 CoaB-like superfamily AMQ28_10630 IPR010980 Cytochrome c/b562 AMQ28_10630 IPR009155 Cytochrome b562 AMQ28_10635 IPR001269 tRNA-dihydrouridine synthase AMQ28_10635 IPR004653 tRNA-dihydrouridine(20/20a) synthase AMQ28_10635 IPR035587 DUS-like, FMN-binding domain AMQ28_10635 IPR018517 tRNA-dihydrouridine synthase, conserved site AMQ28_10635 IPR013785 Aldolase-type TIM barrel AMQ28_10640 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMQ28_10640 IPR035069 TTHA1013/TTHA0281-like AMQ28_10640 IPR010998 Integrase/recombinase, N-terminal AMQ28_10640 IPR002104 Integrase, catalytic domain AMQ28_10640 IPR013762 Integrase-like, catalytic domain superfamily AMQ28_10700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_10700 IPR003356 DNA methylase, adenine-specific AMQ28_10700 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AMQ28_10705 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain AMQ28_10705 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_10705 IPR012340 Nucleic acid-binding, OB-fold AMQ28_10705 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMQ28_10705 IPR033454 RecG, wedge domain AMQ28_10705 IPR011545 DEAD/DEAH box helicase domain AMQ28_10705 IPR038475 RecG, C-terminal domain superfamily AMQ28_10720 IPR001584 Integrase, catalytic core AMQ28_10720 IPR025948 HTH-like domain AMQ28_10720 IPR012337 Ribonuclease H-like superfamily AMQ28_10720 IPR036397 Ribonuclease H superfamily AMQ28_10750 IPR040980 SWI2/SNF2 ATPase AMQ28_10750 IPR004473 Restriction endonuclease, type I, HsdR AMQ28_10750 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal AMQ28_10750 IPR021810 Protein of unknown function DUF3387 AMQ28_10750 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_10750 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMQ28_10775 IPR011701 Major facilitator superfamily AMQ28_10775 IPR020846 Major facilitator superfamily domain AMQ28_10775 IPR036259 MFS transporter superfamily AMQ28_10780 IPR000620 EamA domain AMQ28_10785 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMQ28_10785 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 AMQ28_10785 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMQ28_10785 IPR036291 NAD(P)-binding domain superfamily AMQ28_10785 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 AMQ28_10790 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal AMQ28_10795 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMQ28_10795 IPR012136 NADP transhydrogenase, beta subunit AMQ28_10795 IPR034300 NADP transhydrogenase beta-like domain AMQ28_10800 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_10800 IPR005979 Light-dependent protochlorophyllide reductase AMQ28_10800 IPR036291 NAD(P)-binding domain superfamily AMQ28_10805 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMQ28_10810 IPR036237 Xylose isomerase-like superfamily AMQ28_10810 IPR026040 Hydroxypyruvate isomerase-like AMQ28_10810 IPR013022 Xylose isomerase-like, TIM barrel domain AMQ28_10815 IPR006398 2-hydroxy-3-oxopropionate reductase AMQ28_10815 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AMQ28_10815 IPR036291 NAD(P)-binding domain superfamily AMQ28_10815 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMQ28_10815 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AMQ28_10815 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMQ28_10815 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMQ28_10815 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AMQ28_10820 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMQ28_10820 IPR001753 Enoyl-CoA hydratase/isomerase AMQ28_10820 IPR029045 ClpP/crotonase-like domain superfamily AMQ28_10820 IPR014748 Enoyl-CoA hydratase, C-terminal AMQ28_10825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_10825 IPR005467 Histidine kinase domain AMQ28_10825 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMQ28_10825 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMQ28_10825 IPR011006 CheY-like superfamily AMQ28_10825 IPR036641 HPT domain superfamily AMQ28_10825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMQ28_10825 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AMQ28_10825 IPR001789 Signal transduction response regulator, receiver domain AMQ28_10825 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_10825 IPR019247 Histidine kinase BarA, N-terminal AMQ28_10825 IPR003660 HAMP domain AMQ28_10830 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMQ28_10830 IPR001926 Pyridoxal-phosphate dependent enzyme AMQ28_10830 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AMQ28_10830 IPR005856 Cysteine synthase AMQ28_10830 IPR005858 Cysteine synthase CysM AMQ28_10840 IPR012340 Nucleic acid-binding, OB-fold AMQ28_10840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_10840 IPR002792 TRAM domain AMQ28_10840 IPR010280 (Uracil-5)-methyltransferase family AMQ28_10840 IPR030390 RNA methyltransferase TrmA, active site AMQ28_10840 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD AMQ28_10845 IPR002912 ACT domain AMQ28_10845 IPR012675 Beta-grasp domain superfamily AMQ28_10845 IPR003607 HD/PDEase domain AMQ28_10845 IPR004811 RelA/SpoT family AMQ28_10845 IPR007685 RelA/SpoT AMQ28_10845 IPR004095 TGS AMQ28_10845 IPR012676 TGS-like AMQ28_10845 IPR033655 RelA, TGS domain AMQ28_10850 IPR005665 Protein-export membrane protein SecF, bacterial AMQ28_10850 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMQ28_10850 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMQ28_10850 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMQ28_10855 IPR005791 Protein translocase subunit SecD AMQ28_10855 IPR027398 SecD export protein N-terminal TM domain AMQ28_10855 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMQ28_10855 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMQ28_10855 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMQ28_10860 IPR003849 Preprotein translocase YajC AMQ28_10865 IPR036511 Queuine tRNA-ribosyltransferase-like AMQ28_10865 IPR002616 tRNA-guanine(15) transglycosylase-like AMQ28_10865 IPR004803 tRNA-guanine transglycosylase AMQ28_10870 IPR007156 LemA AMQ28_10870 IPR023353 LemA-like domain superfamily AMQ28_10880 IPR042119 QueA, domain 2 AMQ28_10880 IPR042118 QueA, domain 1 AMQ28_10880 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily AMQ28_10880 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA AMQ28_10890 IPR001789 Signal transduction response regulator, receiver domain AMQ28_10890 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AMQ28_10890 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMQ28_10890 IPR036641 HPT domain superfamily AMQ28_10890 IPR019247 Histidine kinase BarA, N-terminal AMQ28_10890 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMQ28_10890 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMQ28_10890 IPR005467 Histidine kinase domain AMQ28_10890 IPR011006 CheY-like superfamily AMQ28_10890 IPR003660 HAMP domain AMQ28_10890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_10890 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_10895 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AMQ28_10895 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain AMQ28_10895 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme AMQ28_10900 IPR033939 Branched-chain aminotransferase AMQ28_10900 IPR005785 Branched-chain amino acid aminotransferase I AMQ28_10900 IPR036038 Aminotransferase-like, PLP-dependent enzymes AMQ28_10900 IPR018300 Aminotransferase, class IV, conserved site AMQ28_10900 IPR001544 Aminotransferase class IV AMQ28_10910 IPR002509 NodB homology domain AMQ28_10910 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AMQ28_10915 IPR001296 Glycosyl transferase, family 1 AMQ28_10915 IPR011835 Bacterial/plant glycogen synthase AMQ28_10915 IPR013534 Starch synthase, catalytic domain AMQ28_10925 IPR036291 NAD(P)-binding domain superfamily AMQ28_10925 IPR005888 dTDP-glucose 4,6-dehydratase AMQ28_10925 IPR016040 NAD(P)-binding domain AMQ28_10930 IPR029903 RmlD-like substrate binding domain AMQ28_10930 IPR036291 NAD(P)-binding domain superfamily AMQ28_10930 IPR005913 dTDP-4-dehydrorhamnose reductase family AMQ28_10935 IPR029044 Nucleotide-diphospho-sugar transferases AMQ28_10935 IPR005835 Nucleotidyl transferase domain AMQ28_10935 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form AMQ28_10940 IPR011051 RmlC-like cupin domain superfamily AMQ28_10940 IPR014710 RmlC-like jelly roll fold AMQ28_10940 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related AMQ28_10950 IPR036397 Ribonuclease H superfamily AMQ28_10950 IPR025246 Transposase IS30-like HTH domain AMQ28_10950 IPR001598 Transposase, IS30, conserved site AMQ28_10950 IPR012337 Ribonuclease H-like superfamily AMQ28_10950 IPR001584 Integrase, catalytic core AMQ28_10955 IPR029044 Nucleotide-diphospho-sugar transferases AMQ28_10955 IPR001173 Glycosyltransferase 2-like AMQ28_10975 IPR004115 GAD-like domain superfamily AMQ28_10975 IPR029351 GAD domain AMQ28_10975 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMQ28_10975 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AMQ28_10975 IPR004524 Aspartate-tRNA ligase, type 1 AMQ28_10975 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb AMQ28_10975 IPR006195 Aminoacyl-tRNA synthetase, class II AMQ28_10975 IPR012340 Nucleic acid-binding, OB-fold AMQ28_10985 IPR039426 Vitamin B12 transporter BtuB-like AMQ28_10985 IPR000531 TonB-dependent receptor-like, beta-barrel AMQ28_10985 IPR012910 TonB-dependent receptor, plug domain AMQ28_10985 IPR037066 TonB-dependent receptor, plug domain superfamily AMQ28_11005 IPR020948 Phosphate-starvation-induced PsiE-like AMQ28_11005 IPR009315 Phosphate-starvation-induced PsiE AMQ28_11010 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMQ28_11010 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMQ28_11010 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMQ28_11010 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMQ28_11010 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMQ28_11010 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMQ28_11010 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMQ28_11015 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMQ28_11015 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMQ28_11015 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMQ28_11015 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMQ28_11015 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMQ28_11015 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMQ28_11015 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMQ28_11025 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMQ28_11025 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_11025 IPR003660 HAMP domain AMQ28_11025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_11025 IPR005467 Histidine kinase domain AMQ28_11025 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMQ28_11025 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMQ28_11030 IPR001867 OmpR/PhoB-type DNA-binding domain AMQ28_11030 IPR016032 Signal transduction response regulator, C-terminal effector AMQ28_11030 IPR011006 CheY-like superfamily AMQ28_11030 IPR001789 Signal transduction response regulator, receiver domain AMQ28_11030 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_11030 IPR039420 Transcriptional regulatory protein WalR-like AMQ28_11040 IPR003846 Protein adenylyltransferase SelO AMQ28_11055 IPR016030 Cobalamin adenosyltransferase-like AMQ28_11055 IPR036451 Cobalamin adenosyltransferase-like superfamily AMQ28_11055 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type AMQ28_11060 IPR010101 TonB-dependent vitamin B12 transporter BtuB AMQ28_11060 IPR012910 TonB-dependent receptor, plug domain AMQ28_11060 IPR000531 TonB-dependent receptor-like, beta-barrel AMQ28_11060 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMQ28_11060 IPR039426 Vitamin B12 transporter BtuB-like AMQ28_11060 IPR037066 TonB-dependent receptor, plug domain superfamily AMQ28_11065 IPR011060 Ribulose-phosphate binding barrel AMQ28_11065 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) AMQ28_11065 IPR013785 Aldolase-type TIM barrel AMQ28_11070 IPR023026 Tryptophan synthase beta chain/beta chain-like AMQ28_11070 IPR006654 Tryptophan synthase, beta chain AMQ28_11070 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMQ28_11070 IPR001926 Pyridoxal-phosphate dependent enzyme AMQ28_11070 IPR006653 Tryptophan synthase, beta chain, conserved site AMQ28_11090 IPR009057 Homeobox-like domain superfamily AMQ28_11090 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AMQ28_11090 IPR018060 DNA binding HTH domain, AraC-type AMQ28_11095 IPR018204 Tryptophan synthase, alpha chain, active site AMQ28_11095 IPR011060 Ribulose-phosphate binding barrel AMQ28_11095 IPR013785 Aldolase-type TIM barrel AMQ28_11095 IPR002028 Tryptophan synthase, alpha chain AMQ28_11100 IPR034733 Acetyl-CoA carboxylase AMQ28_11100 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AMQ28_11100 IPR029045 ClpP/crotonase-like domain superfamily AMQ28_11100 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit AMQ28_11105 IPR036615 Mur ligase, C-terminal domain superfamily AMQ28_11105 IPR013221 Mur ligase, central AMQ28_11105 IPR036565 Mur-like, catalytic domain superfamily AMQ28_11105 IPR001645 Folylpolyglutamate synthetase AMQ28_11105 IPR018109 Folylpolyglutamate synthetase, conserved site AMQ28_11120 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMQ28_11120 IPR001279 Metallo-beta-lactamase AMQ28_11125 IPR013766 Thioredoxin domain AMQ28_11125 IPR036249 Thioredoxin-like superfamily AMQ28_11125 IPR022915 Peroxiredoxin, TDXH subfamily AMQ28_11125 IPR019479 Peroxiredoxin, C-terminal AMQ28_11125 IPR024706 Peroxiredoxin, AhpC-type AMQ28_11125 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AMQ28_11130 IPR014018 SecA motor DEAD AMQ28_11130 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_11130 IPR004027 SEC-C motif AMQ28_11130 IPR000185 Protein translocase subunit SecA AMQ28_11130 IPR020937 SecA conserved site AMQ28_11130 IPR011115 SecA DEAD-like, N-terminal AMQ28_11130 IPR036670 SecA, preprotein cross-linking domain superfamily AMQ28_11130 IPR036266 SecA, Wing/Scaffold superfamily AMQ28_11130 IPR011130 SecA, preprotein cross-linking domain AMQ28_11130 IPR011116 SecA Wing/Scaffold AMQ28_11140 IPR002813 Arginine biosynthesis protein ArgJ AMQ28_11140 IPR042195 ArgJ beta chain, C-terminal domain AMQ28_11140 IPR016117 ArgJ-like domain superfamily AMQ28_11145 IPR036094 Quinolinate synthetase A superfamily AMQ28_11145 IPR003473 Quinolinate synthetase A AMQ28_11145 IPR023513 Quinolinate synthase A, type 1 AMQ28_11220 IPR007481 Stringent starvation protein B AMQ28_11220 IPR036760 SspB-like superfamily AMQ28_11225 IPR004046 Glutathione S-transferase, C-terminal AMQ28_11225 IPR004045 Glutathione S-transferase, N-terminal AMQ28_11225 IPR040079 Glutathione Transferase family AMQ28_11225 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMQ28_11225 IPR034341 Stringent starvation protein A, N-terminal AMQ28_11225 IPR010987 Glutathione S-transferase, C-terminal-like AMQ28_11225 IPR036249 Thioredoxin-like superfamily AMQ28_11230 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMQ28_11230 IPR020574 Ribosomal protein S9, conserved site AMQ28_11230 IPR023035 Ribosomal protein S9, bacterial/plastid AMQ28_11230 IPR000754 Ribosomal protein S9 AMQ28_11230 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_11235 IPR005822 Ribosomal protein L13 AMQ28_11235 IPR036899 Ribosomal protein L13 superfamily AMQ28_11235 IPR005823 Ribosomal protein L13, bacterial-type AMQ28_11240 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase AMQ28_11240 IPR005255 PdxA family AMQ28_11245 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site AMQ28_11245 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal AMQ28_11245 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_11245 IPR011530 Ribosomal RNA adenine dimethylase AMQ28_11245 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMQ28_11245 IPR023165 rRNA adenine dimethylase-like AMQ28_11250 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) AMQ28_11250 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMQ28_11250 IPR029052 Metallo-dependent phosphatase-like AMQ28_11275 IPR032305 GTP-binding protein, middle domain AMQ28_11275 IPR006073 GTP binding domain AMQ28_11275 IPR016496 GTPase HflX AMQ28_11275 IPR025121 GTPase HflX, N-terminal AMQ28_11275 IPR042108 GTPase HflX, N-terminal domain superfamily AMQ28_11275 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_11275 IPR035647 EF-G domain III/V-like AMQ28_11275 IPR030394 HflX-type guanine nucleotide-binding (G) domain AMQ28_11285 IPR001736 Phospholipase D/Transphosphatidylase AMQ28_11285 IPR025202 Phospholipase D-like domain AMQ28_11285 IPR030871 Cardiolipin synthase C AMQ28_11290 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMQ28_11290 IPR029052 Metallo-dependent phosphatase-like AMQ28_11300 IPR011701 Major facilitator superfamily AMQ28_11300 IPR020846 Major facilitator superfamily domain AMQ28_11300 IPR005828 Major facilitator, sugar transporter-like AMQ28_11300 IPR036259 MFS transporter superfamily AMQ28_11300 IPR004736 MFS transporter, metabolite:H symporter AMQ28_11300 IPR005829 Sugar transporter, conserved site AMQ28_11305 IPR005744 Hly-III AMQ28_11305 IPR004254 AdipoR/Haemolysin-III-related AMQ28_11315 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMQ28_11315 IPR039426 Vitamin B12 transporter BtuB-like AMQ28_11315 IPR010105 TonB-dependent siderophore receptor AMQ28_11315 IPR037066 TonB-dependent receptor, plug domain superfamily AMQ28_11315 IPR012910 TonB-dependent receptor, plug domain AMQ28_11315 IPR000531 TonB-dependent receptor-like, beta-barrel AMQ28_11320 IPR023663 NADPH dehydrogenase AMQ28_11320 IPR013785 Aldolase-type TIM barrel AMQ28_11320 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AMQ28_11345 IPR006222 Aminomethyltransferase, folate-binding domain AMQ28_11345 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMQ28_11345 IPR017703 YgfZ/GcvT conserved site AMQ28_11345 IPR028896 Aminomethyltransferase-like AMQ28_11350 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMQ28_11350 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent AMQ28_11350 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AMQ28_11350 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AMQ28_11350 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AMQ28_11350 IPR036008 Aconitase, iron-sulfur domain AMQ28_11350 IPR006249 Aconitase/Iron-responsive element-binding protein 2 AMQ28_11365 IPR036259 MFS transporter superfamily AMQ28_11365 IPR023495 Sugar efflux transporter, putative AMQ28_11365 IPR011701 Major facilitator superfamily AMQ28_11365 IPR020846 Major facilitator superfamily domain AMQ28_11370 IPR036259 MFS transporter superfamily AMQ28_11370 IPR020846 Major facilitator superfamily domain AMQ28_11370 IPR005829 Sugar transporter, conserved site AMQ28_11370 IPR005828 Major facilitator, sugar transporter-like AMQ28_11370 IPR004736 MFS transporter, metabolite:H symporter AMQ28_11375 IPR006225 Pseudouridine synthase, RluC/RluD AMQ28_11375 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AMQ28_11375 IPR006145 Pseudouridine synthase, RsuA/RluA AMQ28_11375 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMQ28_11390 IPR013988 PhnA protein, C-terminal AMQ28_11390 IPR013987 PhnA protein, N-terminal AMQ28_11390 IPR004624 PhnA protein AMQ28_11400 IPR013785 Aldolase-type TIM barrel AMQ28_11400 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase AMQ28_11400 IPR034291 Thiamine phosphate synthase AMQ28_11400 IPR022998 Thiamine phosphate synthase/TenI AMQ28_11400 IPR016084 Haem oxygenase-like, multi-helical AMQ28_11400 IPR004305 Thiaminase-2/PQQC AMQ28_11400 IPR036206 Thiamin phosphate synthase superfamily AMQ28_11400 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AMQ28_11400 IPR029056 Ribokinase-like AMQ28_11405 IPR036412 HAD-like superfamily AMQ28_11405 IPR041492 Haloacid dehalogenase-like hydrolase AMQ28_11405 IPR023214 HAD superfamily AMQ28_11405 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMQ28_11415 IPR000794 Beta-ketoacyl synthase AMQ28_11415 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMQ28_11415 IPR016039 Thiolase-like AMQ28_11415 IPR018201 Beta-ketoacyl synthase, active site AMQ28_11415 IPR014031 Beta-ketoacyl synthase, C-terminal AMQ28_11415 IPR014030 Beta-ketoacyl synthase, N-terminal AMQ28_11425 IPR006032 Ribosomal protein S12/S23 AMQ28_11425 IPR012340 Nucleic acid-binding, OB-fold AMQ28_11425 IPR005679 Ribosomal protein S12, bacterial-type AMQ28_11430 IPR020606 Ribosomal protein S7, conserved site AMQ28_11430 IPR036823 Ribosomal protein S7 domain superfamily AMQ28_11430 IPR000235 Ribosomal protein S5/S7 AMQ28_11430 IPR023798 Ribosomal protein S7 domain AMQ28_11430 IPR005717 Ribosomal protein S7, bacterial/organellar-type AMQ28_11435 IPR041095 Elongation Factor G, domain II AMQ28_11435 IPR005517 Translation elongation factor EFG/EF2, domain IV AMQ28_11435 IPR004540 Translation elongation factor EFG/EF2 AMQ28_11435 IPR004161 Translation elongation factor EFTu-like, domain 2 AMQ28_11435 IPR035647 EF-G domain III/V-like AMQ28_11435 IPR000640 Elongation factor EFG, domain V-like AMQ28_11435 IPR009000 Translation protein, beta-barrel domain superfamily AMQ28_11435 IPR000795 Transcription factor, GTP-binding domain AMQ28_11435 IPR005225 Small GTP-binding protein domain AMQ28_11435 IPR031157 Tr-type G domain, conserved site AMQ28_11435 IPR009022 Elongation factor G, domain III AMQ28_11435 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_11435 IPR035649 EFG, domain V AMQ28_11435 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMQ28_11435 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_11440 IPR009000 Translation protein, beta-barrel domain superfamily AMQ28_11440 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMQ28_11440 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMQ28_11440 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AMQ28_11440 IPR000795 Transcription factor, GTP-binding domain AMQ28_11440 IPR005225 Small GTP-binding protein domain AMQ28_11440 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_11440 IPR004161 Translation elongation factor EFTu-like, domain 2 AMQ28_11440 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AMQ28_11440 IPR033720 Elongation factor Tu, domain 2 AMQ28_11440 IPR031157 Tr-type G domain, conserved site AMQ28_11450 IPR006464 N-acetyltransferase RimI/Ard1 AMQ28_11450 IPR016181 Acyl-CoA N-acyltransferase AMQ28_11450 IPR000182 GNAT domain AMQ28_11455 IPR016181 Acyl-CoA N-acyltransferase AMQ28_11455 IPR017138 Aspartate/glutamate leucyltransferase AMQ28_11455 IPR007471 N-end aminoacyl transferase, N-terminal AMQ28_11455 IPR030700 N-end rule aminoacyl transferase AMQ28_11455 IPR007472 N-end rule aminoacyl transferase, C-terminal AMQ28_11460 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal AMQ28_11460 IPR016181 Acyl-CoA N-acyltransferase AMQ28_11460 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase AMQ28_11465 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_11465 IPR023753 FAD/NAD(P)-binding domain AMQ28_11465 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AMQ28_11465 IPR005982 Thioredoxin reductase AMQ28_11470 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_11470 IPR041027 FtsK alpha domain AMQ28_11470 IPR002543 FtsK domain AMQ28_11470 IPR018541 FtsK gamma domain AMQ28_11470 IPR025199 DNA translocase FtsK, 4TM region AMQ28_11470 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_11470 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_11485 IPR005527 Cell division topological specificity factor MinE AMQ28_11485 IPR036707 Cell division topological specificity factor MinE superfamily AMQ28_11490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_11490 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMQ28_11490 IPR025501 ATP binding protein MinD AMQ28_11490 IPR010223 ATP binding protein MinD, bacterial-type AMQ28_11495 IPR005526 Septum formation inhibitor MinC, C-terminal AMQ28_11495 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily AMQ28_11495 IPR013033 Septum formation inhibitor MinC AMQ28_11495 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal AMQ28_11505 IPR002123 Phospholipid/glycerol acyltransferase AMQ28_11510 IPR006690 Outer membrane protein, OmpA-like, conserved site AMQ28_11510 IPR039567 Glycine zipper domain AMQ28_11510 IPR036737 OmpA-like domain superfamily AMQ28_11510 IPR006664 Outer membrane protein, bacterial AMQ28_11510 IPR006665 OmpA-like domain AMQ28_11515 IPR014017 UvrD-like DNA helicase, C-terminal AMQ28_11515 IPR000212 DNA helicase, UvrD/REP type AMQ28_11515 IPR005752 ATP-dependent DNA helicase Rep AMQ28_11515 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_11515 IPR014016 UvrD-like helicase, ATP-binding domain AMQ28_11515 IPR034739 UvrD/AddA helicase, N-terminal AMQ28_11515 IPR013986 DExx box DNA helicase domain superfamily AMQ28_11520 IPR036157 dUTPase-like superfamily AMQ28_11520 IPR033704 dUTPase, trimeric AMQ28_11520 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase AMQ28_11520 IPR029054 dUTPase-like AMQ28_11525 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AMQ28_11525 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AMQ28_11525 IPR016066 Alpha-D-phosphohexomutase, conserved site AMQ28_11525 IPR005841 Alpha-D-phosphohexomutase superfamily AMQ28_11525 IPR005843 Alpha-D-phosphohexomutase, C-terminal AMQ28_11525 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AMQ28_11525 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AMQ28_11525 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AMQ28_11530 IPR037528 Acetylglutamate kinase ArgB AMQ28_11530 IPR004662 Acetylglutamate kinase family AMQ28_11530 IPR036393 Acetylglutamate kinase-like superfamily AMQ28_11530 IPR041727 N-Acetyl-L-glutamate kinase, cyclic AMQ28_11530 IPR001048 Aspartate/glutamate/uridylate kinase AMQ28_11535 IPR017932 Glutamine amidotransferase type 2 domain AMQ28_11535 IPR026869 Putative glutamine amidotransferase type 2 AMQ28_11535 IPR029055 Nucleophile aminohydrolases, N-terminal AMQ28_11540 IPR035938 Hemerythrin-like superfamily AMQ28_11540 IPR012312 Haemerythrin-like AMQ28_11540 IPR016131 Haemerythrin, iron-binding site AMQ28_11540 IPR012827 Haemerythrin, metal-binding domain AMQ28_11540 IPR023504 Bacteriohemerythrin-like protein AMQ28_11550 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMQ28_11550 IPR005346 RnfH protein AMQ28_11550 IPR037021 RnfH superfamily AMQ28_11555 IPR007450 Lipoprotein SmpA/OmlA AMQ28_11555 IPR037873 BamE-like AMQ28_11555 IPR026592 Outer membrane protein assembly factor BamE AMQ28_11560 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_11560 IPR002481 Ferric-uptake regulator AMQ28_11560 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_11565 IPR001482 Type II/IV secretion system protein AMQ28_11565 IPR006321 Pilus retraction protein PilT AMQ28_11565 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_11565 IPR003593 AAA+ ATPase domain AMQ28_11570 IPR001482 Type II/IV secretion system protein AMQ28_11570 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_11570 IPR003593 AAA+ ATPase domain AMQ28_11570 IPR006321 Pilus retraction protein PilT AMQ28_11575 IPR001608 Alanine racemase, N-terminal AMQ28_11575 IPR029066 PLP-binding barrel AMQ28_11575 IPR011078 Pyridoxal phosphate homeostasis protein AMQ28_11580 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_11585 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AMQ28_11585 IPR004593 Nuclease SbcCD subunit D AMQ28_11585 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain AMQ28_11585 IPR029052 Metallo-dependent phosphatase-like AMQ28_11585 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMQ28_11590 IPR001633 EAL domain AMQ28_11590 IPR035919 EAL domain superfamily AMQ28_11590 IPR029016 GAF-like domain superfamily AMQ28_11590 IPR013515 Phytochrome, central region AMQ28_11590 IPR000160 GGDEF domain AMQ28_11590 IPR029787 Nucleotide cyclase AMQ28_11590 IPR016132 Phytochrome chromophore attachment domain AMQ28_11590 IPR001294 Phytochrome AMQ28_11590 IPR003018 GAF domain AMQ28_11605 IPR027805 Transposase, Helix-turn-helix domain AMQ28_11605 IPR027806 Harbinger transposase-derived nuclease domain AMQ28_11610 IPR005534 Curli production assembly/transport component CsgG AMQ28_11620 IPR008517 Protein of unknown function DUF799 AMQ28_11625 IPR033911 Methioninyl-tRNA synthetase core domain AMQ28_11625 IPR012340 Nucleic acid-binding, OB-fold AMQ28_11625 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_11625 IPR023458 Methionine-tRNA ligase, type 1 AMQ28_11625 IPR002547 tRNA-binding domain AMQ28_11625 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMQ28_11625 IPR029038 Methionyl-tRNA synthetase, Zn-domain AMQ28_11625 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain AMQ28_11625 IPR015413 Methionyl/Leucyl tRNA synthetase AMQ28_11625 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMQ28_11625 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal AMQ28_11625 IPR014758 Methionyl-tRNA synthetase AMQ28_11645 IPR009248 SbmA/BacA-like AMQ28_11645 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMQ28_11660 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_11660 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_11660 IPR000847 Transcription regulator HTH, LysR AMQ28_11660 IPR005119 LysR, substrate-binding AMQ28_11660 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain AMQ28_11685 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMQ28_11685 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 AMQ28_11685 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 AMQ28_11685 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like AMQ28_11685 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic AMQ28_11685 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site AMQ28_11685 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E AMQ28_11685 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit AMQ28_11685 IPR018027 Asn/Gln amidotransferase AMQ28_11690 IPR023631 Amidase signature domain AMQ28_11690 IPR020556 Amidase, conserved site AMQ28_11690 IPR000120 Amidase AMQ28_11690 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AMQ28_11690 IPR036928 Amidase signature (AS) superfamily AMQ28_11695 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C AMQ28_11695 IPR003837 Glu-tRNAGln amidotransferase C subunit AMQ28_11700 IPR004753 Cell shape determining protein MreB AMQ28_11705 IPR007221 Rod shape-determining protein MreC AMQ28_11705 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 AMQ28_11705 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 AMQ28_11715 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein AMQ28_11715 IPR029001 Inosine triphosphate pyrophosphatase-like AMQ28_11720 IPR012340 Nucleic acid-binding, OB-fold AMQ28_11720 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AMQ28_11720 IPR004659 Ribonuclease E/G AMQ28_11720 IPR022967 RNA-binding domain, S1 AMQ28_11720 IPR003029 S1 domain AMQ28_11725 IPR014292 Acyltransferase, WS/DGAT/MGAT AMQ28_11725 IPR004255 O-acyltransferase, WSD1, N-terminal AMQ28_11725 IPR009721 O-acyltransferase WSD1, C-terminal AMQ28_11730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_11730 IPR002500 Phosphoadenosine phosphosulphate reductase AMQ28_11730 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase AMQ28_11730 IPR011798 Adenosine 5'-phosphosulphate reductase AMQ28_11735 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein AMQ28_11735 IPR023214 HAD superfamily AMQ28_11735 IPR036412 HAD-like superfamily AMQ28_11755 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA AMQ28_11755 IPR016205 Glycerol dehydrogenase AMQ28_11755 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AMQ28_11760 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_11760 IPR036291 NAD(P)-binding domain superfamily AMQ28_11760 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMQ28_11760 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMQ28_11765 IPR005829 Sugar transporter, conserved site AMQ28_11765 IPR004736 MFS transporter, metabolite:H symporter AMQ28_11765 IPR036259 MFS transporter superfamily AMQ28_11765 IPR020846 Major facilitator superfamily domain AMQ28_11765 IPR005828 Major facilitator, sugar transporter-like AMQ28_11785 IPR004841 Amino acid permease/ SLC12A domain AMQ28_11785 IPR004840 Amino acid permease, conserved site AMQ28_11790 IPR007400 PrpF protein AMQ28_11790 IPR012709 2-methyl-aconitate isomerase PrpF AMQ28_11795 IPR000092 Polyprenyl synthetase AMQ28_11795 IPR008949 Isoprenoid synthase domain superfamily AMQ28_11795 IPR033749 Polyprenyl synthetase, conserved site AMQ28_11800 IPR038377 Sodium/glucose symporter superfamily AMQ28_11800 IPR011851 Sodium/proline symporter AMQ28_11800 IPR018212 Sodium/solute symporter, conserved site AMQ28_11800 IPR001734 Sodium/solute symporter AMQ28_11805 IPR018080 Band 7/stomatin-like, conserved site AMQ28_11805 IPR036013 Band 7/SPFH domain superfamily AMQ28_11805 IPR001107 Band 7 domain AMQ28_11805 IPR001972 Stomatin family AMQ28_11815 IPR002641 Patatin-like phospholipase domain AMQ28_11815 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMQ28_11815 IPR001423 Lysophospholipase patatin, conserved site AMQ28_11835 IPR000917 Sulfatase, N-terminal AMQ28_11835 IPR012549 Phosphoethanolamine transferase, N-terminal AMQ28_11835 IPR040423 Phosphoethanolamine transferase AMQ28_11835 IPR017850 Alkaline-phosphatase-like, core domain superfamily AMQ28_11840 IPR011006 CheY-like superfamily AMQ28_11840 IPR001789 Signal transduction response regulator, receiver domain AMQ28_11840 IPR001867 OmpR/PhoB-type DNA-binding domain AMQ28_11840 IPR039420 Transcriptional regulatory protein WalR-like AMQ28_11840 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_11845 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMQ28_11845 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMQ28_11845 IPR005467 Histidine kinase domain AMQ28_11845 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_11845 IPR013727 Two-component sensor kinase, N-terminal AMQ28_11845 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMQ28_11845 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_11855 IPR018047 Ammonium transporter, conserved site AMQ28_11855 IPR001905 Ammonium transporter AMQ28_11855 IPR029020 Ammonium/urea transporter AMQ28_11855 IPR024041 Ammonium transporter AmtB-like domain AMQ28_11860 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AMQ28_11860 IPR003439 ABC transporter-like AMQ28_11860 IPR017871 ABC transporter, conserved site AMQ28_11860 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_11860 IPR003593 AAA+ ATPase domain AMQ28_11865 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AMQ28_11865 IPR035906 MetI-like superfamily AMQ28_11865 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM AMQ28_11865 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMQ28_11870 IPR035906 MetI-like superfamily AMQ28_11870 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ AMQ28_11870 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AMQ28_11870 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMQ28_11875 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMQ28_11880 IPR023090 UPF0702, alpha/beta domain superfamily AMQ28_11880 IPR007353 Protein of unknown function DUF421 AMQ28_11905 IPR042174 DNA-binding RecF, domain 2 AMQ28_11905 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_11905 IPR018078 DNA-binding, RecF, conserved site AMQ28_11905 IPR001238 DNA-binding, RecF AMQ28_11905 IPR003395 RecF/RecN/SMC, N-terminal AMQ28_11910 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMQ28_11910 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily AMQ28_11910 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm AMQ28_11910 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AMQ28_11910 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AMQ28_11910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_11910 IPR002300 Aminoacyl-tRNA synthetase, class Ia AMQ28_11910 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMQ28_11910 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AMQ28_11910 IPR033705 Valyl tRNA synthetase, anticodon-binding domain AMQ28_11910 IPR002303 Valine-tRNA ligase AMQ28_11920 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_11920 IPR036291 NAD(P)-binding domain superfamily AMQ28_11925 IPR002765 Uncharacterised protein family UPF0145 AMQ28_11925 IPR035439 UPF0145 domain superfamily AMQ28_11930 IPR002765 Uncharacterised protein family UPF0145 AMQ28_11930 IPR035439 UPF0145 domain superfamily AMQ28_11935 IPR003423 Outer membrane efflux protein AMQ28_11935 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AMQ28_11940 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMQ28_11940 IPR001036 Acriflavin resistance protein AMQ28_11940 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AMQ28_11945 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMQ28_11945 IPR006143 RND efflux pump, membrane fusion protein AMQ28_11950 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMQ28_11950 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMQ28_11960 IPR000092 Polyprenyl synthetase AMQ28_11960 IPR008949 Isoprenoid synthase domain superfamily AMQ28_11960 IPR033749 Polyprenyl synthetase, conserved site AMQ28_11965 IPR001787 Ribosomal protein L21 AMQ28_11965 IPR028909 Ribosomal protein L21-like AMQ28_11965 IPR036164 L21-like superfamily AMQ28_11965 IPR018258 Ribosomal protein L21, conserved site AMQ28_11970 IPR001684 Ribosomal protein L27 AMQ28_11970 IPR018261 Ribosomal protein L27, conserved site AMQ28_11985 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AMQ28_11985 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria AMQ28_11985 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMQ28_11995 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AMQ28_11995 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AMQ28_11995 IPR006195 Aminoacyl-tRNA synthetase, class II AMQ28_11995 IPR002317 Serine-tRNA ligase, type1 AMQ28_11995 IPR015866 Serine-tRNA synthetase, type1, N-terminal AMQ28_11995 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily AMQ28_11995 IPR033729 Serine-tRNA ligase catalytic core domain AMQ28_12000 IPR000878 Tetrapyrrole methylase AMQ28_12000 IPR035996 Tetrapyrrole methylase superfamily AMQ28_12000 IPR014777 Tetrapyrrole methylase, subdomain 1 AMQ28_12000 IPR014776 Tetrapyrrole methylase, subdomain 2 AMQ28_12000 IPR006366 Uroporphyrin-III C-methyltransferase AMQ28_12000 IPR036291 NAD(P)-binding domain superfamily AMQ28_12000 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AMQ28_12000 IPR006367 Sirohaem synthase, N-terminal AMQ28_12000 IPR019478 Sirohaem synthase, dimerisation domain AMQ28_12000 IPR028281 Siroheme synthase, central domain AMQ28_12000 IPR012409 Sirohaem synthase AMQ28_12000 IPR037115 Sirohaem synthase, dimerisation domain superfamily AMQ28_12005 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMQ28_12005 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase AMQ28_12005 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMQ28_12005 IPR029028 Alpha/beta knot methyltransferases AMQ28_12010 IPR002293 Amino acid/polyamine transporter I AMQ28_12015 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA AMQ28_12015 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AMQ28_12015 IPR039697 Iron-type alcohol dehydrogenase-like AMQ28_12025 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AMQ28_12025 IPR020605 Octanoyltransferase, conserved site AMQ28_12025 IPR000544 Octanoyltransferase AMQ28_12030 IPR007454 Uncharacterised protein family UPF0250 AMQ28_12030 IPR027471 YbeD-like domain superfamily AMQ28_12035 IPR042189 Sigma-70 factor, region 1.1 superfamily AMQ28_12035 IPR013325 RNA polymerase sigma factor, region 2 AMQ28_12035 IPR007627 RNA polymerase sigma-70 region 2 AMQ28_12035 IPR013324 RNA polymerase sigma factor, region 3/4-like AMQ28_12035 IPR000943 RNA polymerase sigma-70 AMQ28_12035 IPR014284 RNA polymerase sigma-70 like domain AMQ28_12035 IPR007630 RNA polymerase sigma-70 region 4 AMQ28_12035 IPR012760 RNA polymerase sigma factor RpoD, C-terminal AMQ28_12035 IPR028630 RNA polymerase sigma factor RpoD AMQ28_12035 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_12035 IPR007624 RNA polymerase sigma-70 region 3 AMQ28_12035 IPR007631 RNA polymerase sigma factor 70, non-essential domain AMQ28_12035 IPR009042 RNA polymerase sigma-70 region 1.2 AMQ28_12035 IPR007127 RNA polymerase sigma factor 70, region 1.1 AMQ28_12050 IPR032816 SNARE associated Golgi protein AMQ28_12065 IPR003190 Aspartate decarboxylase AMQ28_12065 IPR009010 Aspartate decarboxylase-like domain superfamily AMQ28_12070 IPR036416 Peptidyl-tRNA hydrolase superfamily AMQ28_12070 IPR001328 Peptidyl-tRNA hydrolase AMQ28_12070 IPR018171 Peptidyl-tRNA hydrolase, conserved site AMQ28_12075 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal AMQ28_12075 IPR029751 Ribosomal protein L25 AMQ28_12075 IPR020055 Ribosomal protein L25, short-form AMQ28_12075 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily AMQ28_12080 IPR005946 Ribose-phosphate pyrophosphokinase AMQ28_12080 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type AMQ28_12080 IPR029057 Phosphoribosyltransferase-like AMQ28_12080 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain AMQ28_12080 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site AMQ28_12080 IPR000836 Phosphoribosyltransferase domain AMQ28_12105 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_12105 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMQ28_12105 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase AMQ28_12105 IPR006204 GHMP kinase N-terminal domain AMQ28_12105 IPR036554 GHMP kinase, C-terminal domain superfamily AMQ28_12105 IPR013750 GHMP kinase, C-terminal domain AMQ28_12110 IPR004565 Outer membrane lipoprotein LolB AMQ28_12110 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMQ28_12120 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain AMQ28_12120 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AMQ28_12120 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase AMQ28_12120 IPR018214 Glutamyl-tRNA reductase, conserved site AMQ28_12120 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily AMQ28_12120 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily AMQ28_12120 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal AMQ28_12120 IPR036291 NAD(P)-binding domain superfamily AMQ28_12125 IPR002694 Zinc finger, CHC2-type AMQ28_12125 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AMQ28_12125 IPR006171 TOPRIM domain AMQ28_12125 IPR013264 DNA primase, catalytic core, N-terminal AMQ28_12125 IPR034151 Bacterial DnaG primase, TOPRIM domain AMQ28_12125 IPR030846 DNA primase DnaG, bacteria AMQ28_12125 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMQ28_12125 IPR036977 DNA Primase, CHC2-type zinc finger AMQ28_12125 IPR013173 DNA primase DnaG, DnaB-binding domain AMQ28_12125 IPR019475 DNA primase, DnaB-helicase binding domain AMQ28_12125 IPR006295 DNA primase, DnaG AMQ28_12130 IPR011990 Tetratricopeptide-like helical domain superfamily AMQ28_12130 IPR039565 Outer membrane lipoprotein BamD-like AMQ28_12130 IPR017689 Outer membrane protein assembly factor BamD AMQ28_12135 IPR036986 RNA-binding S4 domain superfamily AMQ28_12135 IPR002942 RNA-binding S4 domain AMQ28_12135 IPR006145 Pseudouridine synthase, RsuA/RluA AMQ28_12135 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AMQ28_12135 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMQ28_12135 IPR006225 Pseudouridine synthase, RluC/RluD AMQ28_12145 IPR008254 Flavodoxin/nitric oxide synthase AMQ28_12145 IPR029039 Flavoprotein-like superfamily AMQ28_12145 IPR005025 NADPH-dependent FMN reductase-like AMQ28_12150 IPR020081 SsrA-binding protein, conserved site AMQ28_12150 IPR000037 SsrA-binding protein AMQ28_12150 IPR023620 Small protein B AMQ28_12155 IPR001980 Phosphopantetheine adenylyltransferase AMQ28_12155 IPR004821 Cytidyltransferase-like domain AMQ28_12155 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_12160 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMQ28_12160 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMQ28_12185 IPR003694 NAD(+) synthetase AMQ28_12185 IPR014445 Glutamine-dependent NAD(+) synthetase AMQ28_12185 IPR000132 Nitrilase/cyanide hydratase, conserved site AMQ28_12185 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_12185 IPR022310 NAD/GMP synthase AMQ28_12185 IPR003010 Carbon-nitrogen hydrolase AMQ28_12185 IPR036526 Carbon-nitrogen hydrolase superfamily AMQ28_12215 IPR020946 Flavin monooxygenase-like AMQ28_12215 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_12220 IPR002020 Citrate synthase AMQ28_12220 IPR016143 Citrate synthase-like, small alpha subdomain AMQ28_12220 IPR036969 Citrate synthase superfamily AMQ28_12220 IPR024176 Citrate synthase, bacterial-type AMQ28_12220 IPR019810 Citrate synthase active site AMQ28_12220 IPR016142 Citrate synthase-like, large alpha subdomain AMQ28_12220 IPR010953 Citrate synthase, type I AMQ28_12225 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit AMQ28_12225 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site AMQ28_12225 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit AMQ28_12225 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit AMQ28_12230 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit AMQ28_12230 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor AMQ28_12230 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit AMQ28_12235 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AMQ28_12235 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AMQ28_12235 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AMQ28_12235 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit AMQ28_12235 IPR011281 Succinate dehydrogenase, flavoprotein subunit AMQ28_12235 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMQ28_12235 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_12235 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site AMQ28_12240 IPR012675 Beta-grasp domain superfamily AMQ28_12240 IPR036010 2Fe-2S ferredoxin-like superfamily AMQ28_12240 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMQ28_12240 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMQ28_12240 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMQ28_12240 IPR009051 Alpha-helical ferredoxin AMQ28_12240 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein AMQ28_12240 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal AMQ28_12250 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain AMQ28_12250 IPR011603 2-oxoglutarate dehydrogenase E1 component AMQ28_12250 IPR005475 Transketolase-like, pyrimidine-binding domain AMQ28_12250 IPR001017 Dehydrogenase, E1 component AMQ28_12250 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal AMQ28_12250 IPR029061 Thiamin diphosphate-binding fold AMQ28_12250 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily AMQ28_12255 IPR036625 E3-binding domain superfamily AMQ28_12255 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMQ28_12255 IPR011053 Single hybrid motif AMQ28_12255 IPR004167 Peripheral subunit-binding domain AMQ28_12255 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMQ28_12255 IPR000089 Biotin/lipoyl attachment AMQ28_12255 IPR006255 Dihydrolipoamide succinyltransferase AMQ28_12255 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AMQ28_12260 IPR006258 Dihydrolipoamide dehydrogenase AMQ28_12260 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMQ28_12260 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AMQ28_12260 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AMQ28_12260 IPR023753 FAD/NAD(P)-binding domain AMQ28_12260 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMQ28_12260 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_12265 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AMQ28_12265 IPR016102 Succinyl-CoA synthetase-like AMQ28_12265 IPR005809 Succinate--CoA synthetase, beta subunit AMQ28_12265 IPR011761 ATP-grasp fold AMQ28_12265 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type AMQ28_12265 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site AMQ28_12265 IPR013815 ATP-grasp fold, subdomain 1 AMQ28_12270 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AMQ28_12270 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AMQ28_12270 IPR003781 CoA-binding AMQ28_12270 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AMQ28_12270 IPR036291 NAD(P)-binding domain superfamily AMQ28_12270 IPR016102 Succinyl-CoA synthetase-like AMQ28_12270 IPR005810 Succinyl-CoA ligase, alpha subunit AMQ28_12275 IPR002500 Phosphoadenosine phosphosulphate reductase AMQ28_12275 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_12275 IPR011784 Sulphate adenylyltransferase, small subunit AMQ28_12280 IPR000795 Transcription factor, GTP-binding domain AMQ28_12280 IPR011779 Sulphate adenylyltransferase, large subunit AMQ28_12280 IPR005225 Small GTP-binding protein domain AMQ28_12280 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_12280 IPR031157 Tr-type G domain, conserved site AMQ28_12280 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain AMQ28_12280 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMQ28_12280 IPR002891 Adenylyl-sulfate kinase AMQ28_12280 IPR009000 Translation protein, beta-barrel domain superfamily AMQ28_12290 IPR009081 Phosphopantetheine binding ACP domain AMQ28_12290 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMQ28_12290 IPR013149 Alcohol dehydrogenase, C-terminal AMQ28_12290 IPR018201 Beta-ketoacyl synthase, active site AMQ28_12290 IPR011032 GroES-like superfamily AMQ28_12290 IPR013154 Alcohol dehydrogenase, N-terminal AMQ28_12290 IPR014030 Beta-ketoacyl synthase, N-terminal AMQ28_12290 IPR006162 Phosphopantetheine attachment site AMQ28_12290 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMQ28_12290 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMQ28_12290 IPR014043 Acyl transferase AMQ28_12290 IPR036736 ACP-like superfamily AMQ28_12290 IPR036291 NAD(P)-binding domain superfamily AMQ28_12290 IPR032821 Ketoacyl-synthetase, C-terminal extension AMQ28_12290 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMQ28_12290 IPR020807 Polyketide synthase, dehydratase domain AMQ28_12290 IPR042104 Polyketide synthase, dehydratase domain superfamily AMQ28_12290 IPR020843 Polyketide synthase, enoylreductase domain AMQ28_12290 IPR013968 Polyketide synthase, ketoreductase domain AMQ28_12290 IPR016039 Thiolase-like AMQ28_12290 IPR014031 Beta-ketoacyl synthase, C-terminal AMQ28_12305 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMQ28_12305 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site AMQ28_12305 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMQ28_12305 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase AMQ28_12305 IPR036291 NAD(P)-binding domain superfamily AMQ28_12310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_12310 IPR004498 Ribosomal protein L11 methyltransferase AMQ28_12320 IPR018484 Carbohydrate kinase, FGGY, N-terminal AMQ28_12320 IPR005999 Glycerol kinase AMQ28_12320 IPR018485 Carbohydrate kinase, FGGY, C-terminal AMQ28_12320 IPR000577 Carbohydrate kinase, FGGY AMQ28_12320 IPR018483 Carbohydrate kinase, FGGY, conserved site AMQ28_12325 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_12325 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_12325 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AMQ28_12325 IPR001034 DeoR-type HTH domain AMQ28_12325 IPR014036 DeoR C-terminal sensor domain AMQ28_12325 IPR037171 NagB/RpiA transferase-like AMQ28_12330 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase AMQ28_12330 IPR031656 Alpha-glycerophosphate oxidase, C-terminal AMQ28_12330 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily AMQ28_12330 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_12330 IPR006076 FAD dependent oxidoreductase AMQ28_12335 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal AMQ28_12335 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal AMQ28_12335 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain AMQ28_12335 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising AMQ28_12335 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal AMQ28_12335 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site AMQ28_12340 IPR005218 Diacylglycerol/lipid kinase AMQ28_12340 IPR004363 Methylglyoxal synthase AMQ28_12340 IPR001206 Diacylglycerol kinase, catalytic domain AMQ28_12340 IPR018148 Methylglyoxal synthase, active site AMQ28_12340 IPR011607 Methylglyoxal synthase-like domain AMQ28_12340 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal AMQ28_12340 IPR036914 Methylglyoxal synthase-like domain superfamily AMQ28_12340 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMQ28_12350 IPR011032 GroES-like superfamily AMQ28_12350 IPR018369 Chaperonin GroES, conserved site AMQ28_12350 IPR037124 GroES chaperonin superfamily AMQ28_12350 IPR020818 GroES chaperonin family AMQ28_12355 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMQ28_12355 IPR001844 Chaperonin Cpn60 AMQ28_12355 IPR018370 Chaperonin Cpn60, conserved site AMQ28_12355 IPR002423 Chaperonin Cpn60/TCP-1 family AMQ28_12355 IPR027409 GroEL-like apical domain superfamily AMQ28_12355 IPR027413 GroEL-like equatorial domain superfamily AMQ28_12365 IPR007298 Copper resistance lipoprotein NlpE AMQ28_12365 IPR033450 NlpE, C-terminal OB domain AMQ28_12365 IPR038139 NlpE, C-terminal domain superfamily AMQ28_12385 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMQ28_12385 IPR004398 RNA methyltransferase, RsmD AMQ28_12385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_12390 IPR036138 Penicillin-binding protein, dimerisation domain superfamily AMQ28_12390 IPR012338 Beta-lactamase/transpeptidase-like AMQ28_12390 IPR005311 Penicillin-binding protein, dimerisation domain AMQ28_12390 IPR001460 Penicillin-binding protein, transpeptidase AMQ28_12390 IPR017790 Penicillin-binding protein 2 AMQ28_12405 IPR006259 Adenylate kinase subfamily AMQ28_12405 IPR000850 Adenylate kinase/UMP-CMP kinase AMQ28_12405 IPR033690 Adenylate kinase, conserved site AMQ28_12405 IPR007862 Adenylate kinase, active site lid domain AMQ28_12405 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_12415 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMQ28_12415 IPR000445 Helix-hairpin-helix motif AMQ28_12415 IPR004036 Endonuclease III-like, conserved site-2 AMQ28_12415 IPR003265 HhH-GPD domain AMQ28_12415 IPR011257 DNA glycosylase AMQ28_12415 IPR005759 Endonuclease III AMQ28_12415 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AMQ28_12415 IPR004035 Endonuclease III, iron-sulphur binding site AMQ28_12420 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria AMQ28_12420 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB AMQ28_12420 IPR011005 Dihydropteroate synthase-like AMQ28_12420 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMQ28_12420 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMQ28_12420 IPR007202 4Fe-4S domain AMQ28_12425 IPR014362 Glutamate dehydrogenase AMQ28_12425 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase AMQ28_12425 IPR033524 Leu/Phe/Val dehydrogenases active site AMQ28_12425 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal AMQ28_12425 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain AMQ28_12425 IPR036291 NAD(P)-binding domain superfamily AMQ28_12425 IPR033922 NAD(P) binding domain of glutamate dehydrogenase AMQ28_12435 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AMQ28_12435 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type AMQ28_12440 IPR029028 Alpha/beta knot methyltransferases AMQ28_12440 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMQ28_12440 IPR003742 RNA methyltransferase RlmH AMQ28_12455 IPR007484 Peptidase M28 AMQ28_12460 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_12460 IPR003111 Lon, substrate-binding domain AMQ28_12460 IPR003959 ATPase, AAA-type, core AMQ28_12460 IPR003593 AAA+ ATPase domain AMQ28_12460 IPR008268 Peptidase S16, active site AMQ28_12460 IPR015947 PUA-like superfamily AMQ28_12460 IPR027065 Lon protease AMQ28_12460 IPR008269 Peptidase S16, Lon proteolytic domain AMQ28_12460 IPR027543 Lon protease, bacterial AMQ28_12460 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_12460 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMQ28_12460 IPR004815 Lon protease, bacterial/eukaryotic-type AMQ28_12465 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AMQ28_12465 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMQ28_12465 IPR037171 NagB/RpiA transferase-like AMQ28_12470 IPR009061 Putative DNA-binding domain superfamily AMQ28_12470 IPR011794 Hg(II)-responsive transcriptional regulator AMQ28_12470 IPR000551 MerR-type HTH domain AMQ28_12475 IPR023299 P-type ATPase, cytoplasmic domain N AMQ28_12475 IPR018303 P-type ATPase, phosphorylation site AMQ28_12475 IPR023298 P-type ATPase, transmembrane domain superfamily AMQ28_12475 IPR001757 P-type ATPase AMQ28_12475 IPR027256 P-type ATPase, subfamily IB AMQ28_12475 IPR023214 HAD superfamily AMQ28_12475 IPR036412 HAD-like superfamily AMQ28_12475 IPR008250 P-type ATPase, A domain superfamily AMQ28_12485 IPR036291 NAD(P)-binding domain superfamily AMQ28_12485 IPR001891 Malic oxidoreductase AMQ28_12485 IPR012302 Malic enzyme, NAD-binding AMQ28_12485 IPR015884 Malic enzyme, conserved site AMQ28_12485 IPR023667 NAD-dependent malic enzyme, proteobacteria AMQ28_12485 IPR037062 Malic enzyme, N-terminal domain superfamily AMQ28_12485 IPR012301 Malic enzyme, N-terminal domain AMQ28_12520 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AMQ28_12520 IPR000994 Peptidase M24 AMQ28_12520 IPR001714 Peptidase M24, methionine aminopeptidase AMQ28_12520 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMQ28_12520 IPR007865 Aminopeptidase P, N-terminal AMQ28_12520 IPR036005 Creatinase/aminopeptidase-like AMQ28_12525 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase AMQ28_12525 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AMQ28_12525 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_12525 IPR002938 FAD-binding domain AMQ28_12525 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 AMQ28_12530 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_12530 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AMQ28_12530 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 AMQ28_12530 IPR002938 FAD-binding domain AMQ28_12540 IPR000878 Tetrapyrrole methylase AMQ28_12540 IPR018063 SAM-dependent methyltransferase RsmI, conserved site AMQ28_12540 IPR008189 rRNA small subunit methyltransferase I AMQ28_12540 IPR014777 Tetrapyrrole methylase, subdomain 1 AMQ28_12540 IPR035996 Tetrapyrrole methylase superfamily AMQ28_12540 IPR014776 Tetrapyrrole methylase, subdomain 2 AMQ28_12545 IPR011335 Restriction endonuclease type II-like AMQ28_12545 IPR011856 tRNA endonuclease-like domain superfamily AMQ28_12545 IPR003509 Uncharacterised protein family UPF0102 AMQ28_12550 IPR007055 BON domain AMQ28_12550 IPR014004 Transport-associated and nodulation domain, bacteria AMQ28_12560 IPR015376 Zinc ribbon, NADH pyrophosphatase AMQ28_12560 IPR022925 NADH pyrophosphatase NudC AMQ28_12560 IPR015797 NUDIX hydrolase-like domain superfamily AMQ28_12560 IPR020084 NUDIX hydrolase, conserved site AMQ28_12560 IPR000086 NUDIX hydrolase domain AMQ28_12570 IPR006309 DNA polymerase 3, epsilon subunit AMQ28_12570 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain AMQ28_12570 IPR013520 Exonuclease, RNase T/DNA polymerase III AMQ28_12570 IPR012337 Ribonuclease H-like superfamily AMQ28_12570 IPR036397 Ribonuclease H superfamily AMQ28_12575 IPR036779 LysM domain superfamily AMQ28_12575 IPR000189 Prokaryotic transglycosylase, active site AMQ28_12575 IPR008258 Transglycosylase SLT domain 1 AMQ28_12575 IPR018392 LysM domain AMQ28_12575 IPR023346 Lysozyme-like domain superfamily AMQ28_12580 IPR030678 Peptide/nickel binding protein, MppA-type AMQ28_12580 IPR039424 Solute-binding protein family 5 AMQ28_12580 IPR000914 Solute-binding protein family 5 domain AMQ28_12585 IPR035906 MetI-like superfamily AMQ28_12585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMQ28_12590 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMQ28_12590 IPR035906 MetI-like superfamily AMQ28_12590 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMQ28_12595 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_12595 IPR003439 ABC transporter-like AMQ28_12595 IPR017871 ABC transporter, conserved site AMQ28_12595 IPR003593 AAA+ ATPase domain AMQ28_12595 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMQ28_12600 IPR013785 Aldolase-type TIM barrel AMQ28_12600 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_12600 IPR023753 FAD/NAD(P)-binding domain AMQ28_12600 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AMQ28_12620 IPR004840 Amino acid permease, conserved site AMQ28_12620 IPR004841 Amino acid permease/ SLC12A domain AMQ28_12635 IPR012337 Ribonuclease H-like superfamily AMQ28_12635 IPR005987 Ribonuclease T AMQ28_12635 IPR013520 Exonuclease, RNase T/DNA polymerase III AMQ28_12635 IPR036397 Ribonuclease H superfamily AMQ28_12640 IPR002195 Dihydroorotase, conserved site AMQ28_12640 IPR004721 Dihydroorotase homodimeric type AMQ28_12640 IPR006680 Amidohydrolase-related AMQ28_12640 IPR032466 Metal-dependent hydrolase AMQ28_12645 IPR000160 GGDEF domain AMQ28_12645 IPR029016 GAF-like domain superfamily AMQ28_12645 IPR001633 EAL domain AMQ28_12645 IPR035919 EAL domain superfamily AMQ28_12645 IPR003018 GAF domain AMQ28_12645 IPR013515 Phytochrome, central region AMQ28_12645 IPR001294 Phytochrome AMQ28_12645 IPR016132 Phytochrome chromophore attachment domain AMQ28_12645 IPR029787 Nucleotide cyclase AMQ28_12650 IPR023434 Argininosuccinate synthase, type 1 subfamily AMQ28_12650 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body AMQ28_12650 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_12650 IPR018223 Argininosuccinate synthase, conserved site AMQ28_12650 IPR001518 Argininosuccinate synthase AMQ28_12650 IPR023437 Argininosuccinate synthase, type 2 subfamily AMQ28_12650 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail AMQ28_12655 IPR003804 L-lactate permease AMQ28_12660 IPR008920 Transcription regulator FadR/GntR, C-terminal AMQ28_12660 IPR000524 Transcription regulator HTH, GntR AMQ28_12660 IPR011711 GntR, C-terminal AMQ28_12660 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_12660 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_12665 IPR037396 FMN hydroxy acid dehydrogenase domain AMQ28_12665 IPR000262 FMN-dependent dehydrogenase AMQ28_12665 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent AMQ28_12665 IPR020920 L-lactate dehydrogenase, bacterial AMQ28_12665 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site AMQ28_12665 IPR013785 Aldolase-type TIM barrel AMQ28_12670 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal AMQ28_12670 IPR016164 FAD-linked oxidase-like, C-terminal AMQ28_12670 IPR036318 FAD-binding, type PCMH-like superfamily AMQ28_12670 IPR016167 FAD-binding, type PCMH, subdomain 1 AMQ28_12670 IPR016166 FAD-binding domain, PCMH-type AMQ28_12670 IPR012256 D-lactate dehydrogenase AMQ28_12670 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 AMQ28_12670 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 AMQ28_12670 IPR016169 FAD-binding, type PCMH, subdomain 2 AMQ28_12670 IPR006094 FAD linked oxidase, N-terminal AMQ28_12675 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_12675 IPR013785 Aldolase-type TIM barrel AMQ28_12675 IPR023753 FAD/NAD(P)-binding domain AMQ28_12675 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AMQ28_12685 IPR025668 Transposase DDE domain AMQ28_12690 IPR032710 NTF2-like domain superfamily AMQ28_12690 IPR000391 Ring-hydroxylating dioxygenase beta subunit AMQ28_12690 IPR017640 Anthranilate 1,2-dioxygenase, small subunit AMQ28_12695 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain AMQ28_12695 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site AMQ28_12695 IPR017638 Anthranilate 1,2-dioxygenase, large subunit AMQ28_12695 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit AMQ28_12695 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AMQ28_12695 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMQ28_12700 IPR003829 Pirin, N-terminal domain AMQ28_12700 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain AMQ28_12700 IPR012093 Pirin AMQ28_12700 IPR011051 RmlC-like cupin domain superfamily AMQ28_12700 IPR014710 RmlC-like jelly roll fold AMQ28_12710 IPR000257 Uroporphyrinogen decarboxylase (URO-D) AMQ28_12710 IPR006361 Uroporphyrinogen decarboxylase HemE AMQ28_12710 IPR038071 UROD/MetE-like superfamily AMQ28_12715 IPR008535 Protein of unknown function DUF817 AMQ28_12735 IPR018234 GTP cyclohydrolase I, conserved site AMQ28_12735 IPR020602 GTP cyclohydrolase I domain AMQ28_12735 IPR001474 GTP cyclohydrolase I AMQ28_12740 IPR022990 Uncharacterised protein family UPF0115 AMQ28_12740 IPR036063 Smr domain superfamily AMQ28_12740 IPR002625 Smr domain AMQ28_12745 IPR013785 Aldolase-type TIM barrel AMQ28_12745 IPR013798 Indole-3-glycerol phosphate synthase AMQ28_12745 IPR001468 Indole-3-glycerol phosphate synthase, conserved site AMQ28_12745 IPR011060 Ribulose-phosphate binding barrel AMQ28_12750 IPR005940 Anthranilate phosphoribosyl transferase AMQ28_12750 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily AMQ28_12750 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily AMQ28_12750 IPR000312 Glycosyl transferase, family 3 AMQ28_12750 IPR017459 Glycosyl transferase family 3, N-terminal domain AMQ28_12755 IPR029062 Class I glutamine amidotransferase-like AMQ28_12755 IPR017926 Glutamine amidotransferase AMQ28_12755 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain AMQ28_12770 IPR015590 Aldehyde dehydrogenase domain AMQ28_12770 IPR016162 Aldehyde dehydrogenase, N-terminal AMQ28_12770 IPR010102 Succinate semialdehyde dehydrogenase AMQ28_12770 IPR016163 Aldehyde dehydrogenase, C-terminal AMQ28_12770 IPR016160 Aldehyde dehydrogenase, cysteine active site AMQ28_12770 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMQ28_12770 IPR016161 Aldehyde/histidinol dehydrogenase AMQ28_12775 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMQ28_12775 IPR007440 Chorismate--pyruvate lyase AMQ28_12780 IPR006370 4-hydroxybenzoate polyprenyltransferase-like AMQ28_12780 IPR039653 Prenyltransferase AMQ28_12780 IPR000537 UbiA prenyltransferase family AMQ28_12795 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMQ28_12795 IPR000531 TonB-dependent receptor-like, beta-barrel AMQ28_12795 IPR039423 TonB-dependent receptor-like AMQ28_12820 IPR019833 Manganese/iron superoxide dismutase, binding site AMQ28_12820 IPR019832 Manganese/iron superoxide dismutase, C-terminal AMQ28_12820 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily AMQ28_12820 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily AMQ28_12820 IPR019831 Manganese/iron superoxide dismutase, N-terminal AMQ28_12820 IPR001189 Manganese/iron superoxide dismutase AMQ28_12825 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AMQ28_12825 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMQ28_12830 IPR001940 Peptidase S1C AMQ28_12830 IPR001478 PDZ domain AMQ28_12830 IPR009003 Peptidase S1, PA clan AMQ28_12830 IPR011782 Peptidase S1C, Do AMQ28_12830 IPR036034 PDZ superfamily AMQ28_12830 IPR041489 PDZ domain 6 AMQ28_12855 IPR001714 Peptidase M24, methionine aminopeptidase AMQ28_12855 IPR000994 Peptidase M24 AMQ28_12855 IPR036005 Creatinase/aminopeptidase-like AMQ28_12855 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 AMQ28_12860 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AMQ28_12860 IPR018130 Ribosomal protein S2, conserved site AMQ28_12860 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid AMQ28_12860 IPR001865 Ribosomal protein S2 AMQ28_12865 IPR036402 Elongation factor Ts, dimerisation domain superfamily AMQ28_12865 IPR001816 Translation elongation factor EFTs/EF1B AMQ28_12865 IPR018101 Translation elongation factor Ts, conserved site AMQ28_12865 IPR009060 UBA-like superfamily AMQ28_12865 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation AMQ28_12880 IPR034718 Endolytic peptidoglycan transglycosylase RlpA AMQ28_12880 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMQ28_12880 IPR036908 RlpA-like domain superfamily AMQ28_12880 IPR012997 Rare lipoprotein A AMQ28_12880 IPR007730 Sporulation-like domain AMQ28_12885 IPR011757 Lytic transglycosylase MltB AMQ28_12885 IPR023346 Lysozyme-like domain superfamily AMQ28_12885 IPR031304 Transglycosylase SLT domain 2 AMQ28_12895 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF AMQ28_12895 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal AMQ28_12895 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 AMQ28_12900 IPR000412 ABC-2 transporter AMQ28_12900 IPR013525 ABC-2 type transporter AMQ28_12905 IPR017871 ABC transporter, conserved site AMQ28_12905 IPR003439 ABC transporter-like AMQ28_12905 IPR003593 AAA+ ATPase domain AMQ28_12905 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_12920 IPR027805 Transposase, Helix-turn-helix domain AMQ28_12920 IPR027806 Harbinger transposase-derived nuclease domain AMQ28_12925 IPR027805 Transposase, Helix-turn-helix domain AMQ28_12925 IPR027806 Harbinger transposase-derived nuclease domain AMQ28_12950 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_12950 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_12950 IPR001085 Serine hydroxymethyltransferase AMQ28_12950 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AMQ28_12950 IPR039429 Serine hydroxymethyltransferase-like domain AMQ28_12950 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_12955 IPR028625 Regulator of nucleoside diphosphate kinase AMQ28_12955 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AMQ28_12955 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AMQ28_12955 IPR023459 Transcription elongation factor GreA/GreB family AMQ28_12955 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily AMQ28_12960 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMQ28_12965 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_12965 IPR023753 FAD/NAD(P)-binding domain AMQ28_12970 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily AMQ28_12970 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AMQ28_12970 IPR015956 Penicillin-binding protein, C-terminal domain superfamily AMQ28_12970 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AMQ28_12970 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal AMQ28_12970 IPR012338 Beta-lactamase/transpeptidase-like AMQ28_12980 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric AMQ28_12985 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AMQ28_12985 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMQ28_12985 IPR006145 Pseudouridine synthase, RsuA/RluA AMQ28_12985 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AMQ28_12985 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AMQ28_13070 IPR015927 Peptidase S24/S26A/S26B/S26C AMQ28_13070 IPR036286 LexA/Signal peptidase-like superfamily AMQ28_13070 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMQ28_13070 IPR039418 LexA-like AMQ28_13070 IPR001387 Cro/C1-type helix-turn-helix domain AMQ28_13090 IPR002611 IstB-like ATP-binding protein AMQ28_13090 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AMQ28_13090 IPR001270 ClpA/B family AMQ28_13090 IPR003593 AAA+ ATPase domain AMQ28_13090 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_13095 IPR018876 Bacteriophage P22, antirepressor protein, C-terminal AMQ28_13095 IPR003497 BRO N-terminal domain AMQ28_13150 IPR009279 Protein of unknown function DUF935 AMQ28_13310 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMQ28_13310 IPR038488 Integrase, DNA-binding domain superfamily AMQ28_13310 IPR010998 Integrase/recombinase, N-terminal AMQ28_13310 IPR025166 Integrase, DNA-binding domain AMQ28_13310 IPR013762 Integrase-like, catalytic domain superfamily AMQ28_13310 IPR002104 Integrase, catalytic domain AMQ28_13315 IPR024084 Isopropylmalate dehydrogenase-like domain AMQ28_13315 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic AMQ28_13315 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AMQ28_13330 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_13330 IPR004839 Aminotransferase, class I/classII AMQ28_13330 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_13330 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_13335 IPR011057 Mss4-like superfamily AMQ28_13335 IPR002579 Peptide methionine sulphoxide reductase MrsB AMQ28_13335 IPR028427 Peptide methionine sulfoxide reductase AMQ28_13340 IPR029759 Glutathione peroxidase active site AMQ28_13340 IPR036249 Thioredoxin-like superfamily AMQ28_13340 IPR000889 Glutathione peroxidase AMQ28_13340 IPR029760 Glutathione peroxidase conserved site AMQ28_13345 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ AMQ28_13345 IPR004839 Aminotransferase, class I/classII AMQ28_13345 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_13345 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_13345 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_13350 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AMQ28_13350 IPR002934 Polymerase, nucleotidyl transferase domain AMQ28_13350 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme AMQ28_13350 IPR006674 HD domain AMQ28_13350 IPR003607 HD/PDEase domain AMQ28_13350 IPR002912 ACT domain AMQ28_13355 IPR013815 ATP-grasp fold, subdomain 1 AMQ28_13355 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AMQ28_13355 IPR011761 ATP-grasp fold AMQ28_13355 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase AMQ28_13355 IPR016185 Pre-ATP-grasp domain superfamily AMQ28_13355 IPR011054 Rudiment single hybrid motif AMQ28_13360 IPR008407 Branched-chain amino acid transport, AzlD AMQ28_13365 IPR011606 Branched-chain amino acid transport, permease AMQ28_13375 IPR012318 Crp-type HTH domain AMQ28_13375 IPR018490 Cyclic nucleotide-binding-like AMQ28_13375 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_13375 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_13375 IPR014710 RmlC-like jelly roll fold AMQ28_13375 IPR000595 Cyclic nucleotide-binding domain AMQ28_13385 IPR004095 TGS AMQ28_13385 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 AMQ28_13385 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_13385 IPR006073 GTP binding domain AMQ28_13385 IPR012676 TGS-like AMQ28_13385 IPR012675 Beta-grasp domain superfamily AMQ28_13385 IPR013029 YchF, C-terminal domain AMQ28_13385 IPR023192 TGS-like domain superfamily AMQ28_13385 IPR031167 OBG-type guanine nucleotide-binding (G) domain AMQ28_13385 IPR041706 YchF, N-terminal AMQ28_13395 IPR000485 AsnC-type HTH domain AMQ28_13395 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_13395 IPR011008 Dimeric alpha-beta barrel AMQ28_13395 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_13395 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMQ28_13395 IPR011991 ArsR-like helix-turn-helix domain AMQ28_13395 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMQ28_13395 IPR019888 Transcription regulator AsnC-type AMQ28_13400 IPR029072 YebC-like AMQ28_13400 IPR026564 Transcriptional regulator TACO1-like, domain 3 AMQ28_13400 IPR002876 Transcriptional regulator TACO1-like AMQ28_13400 IPR017856 Integrase-like, N-terminal AMQ28_13405 IPR002123 Phospholipid/glycerol acyltransferase AMQ28_13405 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase AMQ28_13440 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB AMQ28_13440 IPR006638 Elp3/MiaB/NifB AMQ28_13440 IPR013785 Aldolase-type TIM barrel AMQ28_13440 IPR007197 Radical SAM AMQ28_13440 IPR010722 Biotin and thiamin synthesis-associated domain AMQ28_13440 IPR024177 Biotin synthase AMQ28_13445 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMQ28_13445 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMQ28_13445 IPR004453 Epoxyqueuosine reductase QueG AMQ28_13445 IPR009051 Alpha-helical ferredoxin AMQ28_13445 IPR013542 Domain of unknown function DUF1730 AMQ28_13450 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr AMQ28_13450 IPR036652 YjeF N-terminal domain superfamily AMQ28_13450 IPR004443 YjeF N-terminal domain AMQ28_13450 IPR017953 Carbohydrate kinase, predicted, conserved site AMQ28_13450 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase AMQ28_13450 IPR029056 Ribokinase-like AMQ28_13460 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site AMQ28_13460 IPR036397 Ribonuclease H superfamily AMQ28_13460 IPR012337 Ribonuclease H-like superfamily AMQ28_13460 IPR002176 Crossover junction endodeoxyribonuclease RuvC AMQ28_13480 IPR011008 Dimeric alpha-beta barrel AMQ28_13480 IPR014910 Putative monooxygenase YdhR AMQ28_13485 IPR002133 S-adenosylmethionine synthetase AMQ28_13485 IPR022636 S-adenosylmethionine synthetase superfamily AMQ28_13485 IPR022629 S-adenosylmethionine synthetase, central domain AMQ28_13485 IPR022628 S-adenosylmethionine synthetase, N-terminal AMQ28_13485 IPR022630 S-adenosylmethionine synthetase, C-terminal AMQ28_13485 IPR022631 S-adenosylmethionine synthetase, conserved site AMQ28_13490 IPR005474 Transketolase, N-terminal AMQ28_13490 IPR033247 Transketolase family AMQ28_13490 IPR029061 Thiamin diphosphate-binding fold AMQ28_13490 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMQ28_13490 IPR033248 Transketolase, C-terminal domain AMQ28_13490 IPR020826 Transketolase binding site AMQ28_13490 IPR005475 Transketolase-like, pyrimidine-binding domain AMQ28_13490 IPR005478 Transketolase, bacterial-like AMQ28_13505 IPR023480 Uncharacterised protein family UPF0312/YceI AMQ28_13505 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMQ28_13505 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMQ28_13510 IPR004778 Homoserine/Threonine efflux protein AMQ28_13510 IPR001123 Amino acid exporter protein, LeuE-type AMQ28_13515 IPR029062 Class I glutamine amidotransferase-like AMQ28_13515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_13515 IPR022310 NAD/GMP synthase AMQ28_13515 IPR017926 Glutamine amidotransferase AMQ28_13515 IPR004739 GMP synthase, glutamine amidotransferase AMQ28_13515 IPR001674 GMP synthase, C-terminal AMQ28_13515 IPR022955 GMP synthase AMQ28_13515 IPR025777 GMP synthetase ATP pyrophosphatase domain AMQ28_13520 IPR015590 Aldehyde dehydrogenase domain AMQ28_13520 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMQ28_13520 IPR016160 Aldehyde dehydrogenase, cysteine active site AMQ28_13520 IPR016162 Aldehyde dehydrogenase, N-terminal AMQ28_13520 IPR016163 Aldehyde dehydrogenase, C-terminal AMQ28_13520 IPR016161 Aldehyde/histidinol dehydrogenase AMQ28_13525 IPR029016 GAF-like domain superfamily AMQ28_13535 IPR002347 Short-chain dehydrogenase/reductase SDR AMQ28_13535 IPR005979 Light-dependent protochlorophyllide reductase AMQ28_13535 IPR036291 NAD(P)-binding domain superfamily AMQ28_13540 IPR003593 AAA+ ATPase domain AMQ28_13540 IPR005890 Nitrate transport ATP-binding subunit C/D AMQ28_13540 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_13540 IPR003439 ABC transporter-like AMQ28_13540 IPR017871 ABC transporter, conserved site AMQ28_13550 IPR004737 Nitrate transporter AMQ28_13550 IPR036259 MFS transporter superfamily AMQ28_13550 IPR020846 Major facilitator superfamily domain AMQ28_13550 IPR011701 Major facilitator superfamily AMQ28_13555 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMQ28_13555 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_13555 IPR023753 FAD/NAD(P)-binding domain AMQ28_13555 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AMQ28_13555 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AMQ28_13555 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AMQ28_13555 IPR017121 Nitrite reductase [NAD(P)H], large subunit AMQ28_13555 IPR007419 BFD-like [2Fe-2S]-binding domain AMQ28_13555 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AMQ28_13555 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal AMQ28_13555 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB AMQ28_13560 IPR007419 BFD-like [2Fe-2S]-binding domain AMQ28_13560 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMQ28_13560 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AMQ28_13560 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMQ28_13560 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AMQ28_13560 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB AMQ28_13560 IPR017121 Nitrite reductase [NAD(P)H], large subunit AMQ28_13560 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AMQ28_13560 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AMQ28_13560 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal AMQ28_13560 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_13560 IPR023753 FAD/NAD(P)-binding domain AMQ28_13565 IPR006656 Molybdopterin oxidoreductase AMQ28_13565 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain AMQ28_13565 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMQ28_13565 IPR007419 BFD-like [2Fe-2S]-binding domain AMQ28_13565 IPR009010 Aspartate decarboxylase-like domain superfamily AMQ28_13565 IPR006657 Molybdopterin dinucleotide-binding domain AMQ28_13565 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AMQ28_13565 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AMQ28_13570 IPR025877 MobA-like NTP transferase AMQ28_13570 IPR013482 Molybdenum cofactor guanylyltransferase AMQ28_13570 IPR029044 Nucleotide-diphospho-sugar transferases AMQ28_13575 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AMQ28_13575 IPR006638 Elp3/MiaB/NifB AMQ28_13575 IPR013785 Aldolase-type TIM barrel AMQ28_13575 IPR007197 Radical SAM AMQ28_13575 IPR010505 Molybdenum cofactor synthesis C-terminal AMQ28_13575 IPR013483 Molybdenum cofactor biosynthesis protein A AMQ28_13585 IPR003448 Molybdopterin biosynthesis MoaE AMQ28_13585 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily AMQ28_13600 IPR005955 Glutathione S-transferases, class Zeta AMQ28_13600 IPR004046 Glutathione S-transferase, C-terminal AMQ28_13600 IPR004045 Glutathione S-transferase, N-terminal AMQ28_13600 IPR040079 Glutathione Transferase family AMQ28_13600 IPR034330 Glutathione S-transferases, class Zeta , C-terminal AMQ28_13600 IPR010987 Glutathione S-transferase, C-terminal-like AMQ28_13600 IPR034333 Glutathione S-transferases, class Zeta , N-terminal AMQ28_13600 IPR036249 Thioredoxin-like superfamily AMQ28_13600 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMQ28_13625 IPR015803 Cysteine-tRNA ligase AMQ28_13625 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR AMQ28_13625 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMQ28_13625 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase AMQ28_13625 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_13625 IPR032678 tRNA synthetases class I, catalytic domain AMQ28_13630 IPR000644 CBS domain AMQ28_13630 IPR001347 Sugar isomerase (SIS) AMQ28_13630 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type AMQ28_13630 IPR035474 KpsF-like, SIS domain AMQ28_13635 IPR036412 HAD-like superfamily AMQ28_13635 IPR023214 HAD superfamily AMQ28_13635 IPR010023 KdsC family AMQ28_13645 IPR005653 Organic solvent tolerance-like, N-terminal AMQ28_13645 IPR014340 Lipopolysaccharide export system protein LptA AMQ28_13650 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMQ28_13650 IPR030921 LPS export ABC transporter, ATP-binding protein LptB AMQ28_13650 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_13650 IPR003593 AAA+ ATPase domain AMQ28_13650 IPR003439 ABC transporter-like AMQ28_13650 IPR017871 ABC transporter, conserved site AMQ28_13660 IPR027805 Transposase, Helix-turn-helix domain AMQ28_13660 IPR027806 Harbinger transposase-derived nuclease domain AMQ28_13665 IPR027805 Transposase, Helix-turn-helix domain AMQ28_13665 IPR027806 Harbinger transposase-derived nuclease domain AMQ28_13675 IPR003439 ABC transporter-like AMQ28_13675 IPR017871 ABC transporter, conserved site AMQ28_13675 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_13675 IPR003593 AAA+ ATPase domain AMQ28_13675 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMQ28_13675 IPR039421 Type I protein exporter AMQ28_13675 IPR005074 Peptidase C39, bacteriocin processing AMQ28_13675 IPR005897 Peptidase C39, ABC-type bacteriocin transporter AMQ28_13675 IPR011527 ABC transporter type 1, transmembrane domain AMQ28_13680 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMQ28_13680 IPR010129 Type I secretion membrane fusion protein, HlyD family AMQ28_13680 IPR006144 Secretion protein HlyD, conserved site AMQ28_13685 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AMQ28_13685 IPR035647 EF-G domain III/V-like AMQ28_13685 IPR020568 Ribosomal protein S5 domain 2-type fold AMQ28_13685 IPR036956 Impact, N-terminal domain superfamily AMQ28_13685 IPR023582 Impact family AMQ28_13685 IPR001498 Impact, N-terminal AMQ28_13695 IPR006015 Universal stress protein A family AMQ28_13695 IPR006016 UspA AMQ28_13700 IPR002935 Class I-like SAM-dependent O-methyltransferase AMQ28_13700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_13710 IPR022569 Ferredoxin, C-terminal AMQ28_13710 IPR000813 7Fe ferredoxin AMQ28_13710 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMQ28_13710 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMQ28_13715 IPR005748 DNA mismatch repair protein MutS AMQ28_13715 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_13715 IPR036678 MutS, connector domain superfamily AMQ28_13715 IPR007860 DNA mismatch repair protein MutS, connector domain AMQ28_13715 IPR036187 DNA mismatch repair protein MutS, core domain superfamily AMQ28_13715 IPR016151 DNA mismatch repair protein MutS, N-terminal AMQ28_13715 IPR007696 DNA mismatch repair protein MutS, core AMQ28_13715 IPR007861 DNA mismatch repair protein MutS, clamp AMQ28_13715 IPR000432 DNA mismatch repair protein MutS, C-terminal AMQ28_13715 IPR017261 DNA mismatch repair protein MutS/MSH AMQ28_13715 IPR007695 DNA mismatch repair protein MutS-like, N-terminal AMQ28_13730 IPR001451 Hexapeptide repeat AMQ28_13730 IPR005881 Serine O-acetyltransferase AMQ28_13730 IPR011004 Trimeric LpxA-like superfamily AMQ28_13730 IPR042122 Serine acetyltransferase, N-terminal domain superfamily AMQ28_13735 IPR029028 Alpha/beta knot methyltransferases AMQ28_13735 IPR004384 RNA methyltransferase TrmJ/LasT AMQ28_13735 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMQ28_13735 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMQ28_13740 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMQ28_13740 IPR004013 PHP domain AMQ28_13740 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMQ28_13740 IPR029460 DNA polymerase, helix-hairpin-helix motif AMQ28_13740 IPR040982 DNA polymerase III alpha subunit finger domain AMQ28_13740 IPR004805 DNA polymerase III, alpha subunit AMQ28_13740 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain AMQ28_13740 IPR016195 Polymerase/histidinol phosphatase-like AMQ28_13740 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain AMQ28_13745 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMQ28_13745 IPR035906 MetI-like superfamily AMQ28_13750 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain AMQ28_13750 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal AMQ28_13750 IPR017871 ABC transporter, conserved site AMQ28_13750 IPR003439 ABC transporter-like AMQ28_13750 IPR026253 Methionine import ATP-binding protein MetN AMQ28_13750 IPR003593 AAA+ ATPase domain AMQ28_13750 IPR018449 NIL domain AMQ28_13750 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_13755 IPR004872 Lipoprotein NlpA family AMQ28_13760 IPR016185 Pre-ATP-grasp domain superfamily AMQ28_13760 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMQ28_13760 IPR000115 Phosphoribosylglycinamide synthetase AMQ28_13760 IPR020560 Phosphoribosylglycinamide synthetase, C-domain AMQ28_13760 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily AMQ28_13760 IPR020559 Phosphoribosylglycinamide synthetase, conserved site AMQ28_13760 IPR013815 ATP-grasp fold, subdomain 1 AMQ28_13760 IPR011761 ATP-grasp fold AMQ28_13760 IPR011054 Rudiment single hybrid motif AMQ28_13760 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal AMQ28_13765 IPR024051 AICAR transformylase, duplicated domain superfamily AMQ28_13765 IPR016193 Cytidine deaminase-like AMQ28_13765 IPR011607 Methylglyoxal synthase-like domain AMQ28_13765 IPR036914 Methylglyoxal synthase-like domain superfamily AMQ28_13765 IPR002695 Bifunctional purine biosynthesis protein PurH-like AMQ28_13770 IPR002197 DNA binding HTH domain, Fis-type AMQ28_13770 IPR009057 Homeobox-like domain superfamily AMQ28_13770 IPR005412 DNA-binding protein Fis AMQ28_13780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_13780 IPR004498 Ribosomal protein L11 methyltransferase AMQ28_13795 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related AMQ28_13795 IPR020595 MnmG-related, conserved site AMQ28_13795 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG AMQ28_13795 IPR026904 GidA associated domain 3 AMQ28_13795 IPR036188 FAD/NAD(P)-binding domain superfamily AMQ28_13805 IPR002078 RNA polymerase sigma factor 54 interaction domain AMQ28_13805 IPR010114 DNA-binding transcriptional regulator NtrC AMQ28_13805 IPR025944 Sigma-54 interaction domain, conserved site AMQ28_13805 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMQ28_13805 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMQ28_13805 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_13805 IPR002197 DNA binding HTH domain, Fis-type AMQ28_13805 IPR009057 Homeobox-like domain superfamily AMQ28_13805 IPR011006 CheY-like superfamily AMQ28_13805 IPR003593 AAA+ ATPase domain AMQ28_13805 IPR001789 Signal transduction response regulator, receiver domain AMQ28_13810 IPR005467 Histidine kinase domain AMQ28_13810 IPR013767 PAS fold AMQ28_13810 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMQ28_13810 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMQ28_13810 IPR000014 PAS domain AMQ28_13810 IPR003594 Histidine kinase/HSP90-like ATPase AMQ28_13810 IPR035965 PAS domain superfamily AMQ28_13810 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMQ28_13810 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMQ28_13815 IPR041582 RimO, TRAM domain AMQ28_13815 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMQ28_13815 IPR005839 Methylthiotransferase AMQ28_13815 IPR006638 Elp3/MiaB/NifB AMQ28_13815 IPR002792 TRAM domain AMQ28_13815 IPR023404 Radical SAM, alpha/beta horseshoe AMQ28_13815 IPR007197 Radical SAM AMQ28_13815 IPR013848 Methylthiotransferase, N-terminal AMQ28_13815 IPR005840 Ribosomal protein S12 methylthiotransferase RimO AMQ28_13815 IPR020612 Methylthiotransferase, conserved site AMQ28_13820 IPR015963 Uridylate kinase, bacteria AMQ28_13820 IPR011817 Uridylate kinase AMQ28_13820 IPR036393 Acetylglutamate kinase-like superfamily AMQ28_13820 IPR001048 Aspartate/glutamate/uridylate kinase AMQ28_13825 IPR036191 RRF superfamily AMQ28_13825 IPR023584 Ribosome recycling factor domain AMQ28_13825 IPR002661 Ribosome recycling factor AMQ28_13830 IPR001441 Decaprenyl diphosphate synthase-like AMQ28_13830 IPR036424 Decaprenyl diphosphate synthase-like superfamily AMQ28_13830 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site AMQ28_13835 IPR000374 Phosphatidate cytidylyltransferase AMQ28_13840 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMQ28_13840 IPR036291 NAD(P)-binding domain superfamily AMQ28_13840 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal AMQ28_13840 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal AMQ28_13840 IPR026877 DXP reductoisomerase C-terminal domain AMQ28_13840 IPR036169 DXP reductoisomerase, C-terminal domain superfamily AMQ28_13845 IPR036034 PDZ superfamily AMQ28_13845 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase AMQ28_13845 IPR008915 Peptidase M50 AMQ28_13845 IPR001478 PDZ domain AMQ28_13845 IPR041489 PDZ domain 6 AMQ28_13850 IPR000184 Bacterial surface antigen (D15) AMQ28_13850 IPR010827 POTRA domain, BamA/TamA-like AMQ28_13850 IPR039910 Surface antigen D15-like AMQ28_13850 IPR034746 POTRA domain AMQ28_13850 IPR023707 Outer membrane protein assembly factor BamA AMQ28_13860 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region AMQ28_13860 IPR011004 Trimeric LpxA-like superfamily AMQ28_13860 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD AMQ28_13860 IPR001451 Hexapeptide repeat AMQ28_13865 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AMQ28_13865 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ AMQ28_13865 IPR029069 HotDog domain superfamily AMQ28_13870 IPR018357 Hexapeptide transferase, conserved site AMQ28_13870 IPR001451 Hexapeptide repeat AMQ28_13870 IPR011004 Trimeric LpxA-like superfamily AMQ28_13870 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily AMQ28_13870 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal AMQ28_13870 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase AMQ28_13880 IPR003783 Regulatory protein RecX AMQ28_13880 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_13885 IPR003593 AAA+ ATPase domain AMQ28_13885 IPR013765 DNA recombination and repair protein RecA AMQ28_13885 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface AMQ28_13885 IPR023400 DNA recombination and repair protein RecA, C-terminal AMQ28_13885 IPR020584 DNA recombination/repair protein RecA, conserved site AMQ28_13885 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_13885 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain AMQ28_13890 IPR025708 Heat shock protein 15 AMQ28_13890 IPR036986 RNA-binding S4 domain superfamily AMQ28_13890 IPR002942 RNA-binding S4 domain AMQ28_13895 IPR041492 Haloacid dehalogenase-like hydrolase AMQ28_13895 IPR036412 HAD-like superfamily AMQ28_13895 IPR006439 HAD hydrolase, subfamily IA AMQ28_13895 IPR023214 HAD superfamily AMQ28_13900 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ AMQ28_13900 IPR020583 Inositol monophosphatase, metal-binding site AMQ28_13900 IPR000760 Inositol monophosphatase-like AMQ28_13900 IPR020550 Inositol monophosphatase, conserved site AMQ28_13910 IPR002583 Ribosomal protein S20 AMQ28_13910 IPR036510 Ribosomal protein S20 superfamily AMQ28_13915 IPR016040 NAD(P)-binding domain AMQ28_13915 IPR036291 NAD(P)-binding domain superfamily AMQ28_13915 IPR000534 Semialdehyde dehydrogenase, NAD-binding AMQ28_13920 IPR010203 Regulator of ribonuclease activity A AMQ28_13920 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AMQ28_13920 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AMQ28_13930 IPR039994 JmjC domain-containing AMQ28_13930 IPR003347 JmjC domain AMQ28_13935 IPR029001 Inosine triphosphate pyrophosphatase-like AMQ28_13935 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein AMQ28_13945 IPR001576 Phosphoglycerate kinase AMQ28_13945 IPR015824 Phosphoglycerate kinase, N-terminal AMQ28_13945 IPR015911 Phosphoglycerate kinase, conserved site AMQ28_13945 IPR036043 Phosphoglycerate kinase superfamily AMQ28_13955 IPR013785 Aldolase-type TIM barrel AMQ28_13955 IPR000771 Fructose-bisphosphate aldolase, class-II AMQ28_13955 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype AMQ28_13965 IPR033878 Nitroreductase NfsB-like AMQ28_13965 IPR000415 Nitroreductase-like AMQ28_13965 IPR029479 Nitroreductase AMQ28_13970 IPR010138 UDP-2,3-diacylglucosamine hydrolase AMQ28_13970 IPR029052 Metallo-dependent phosphatase-like AMQ28_13970 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMQ28_13975 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase AMQ28_13975 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AMQ28_13975 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AMQ28_13975 IPR029000 Cyclophilin-like domain superfamily AMQ28_13980 IPR022861 Glutamine-tRNA ligase, bacterial AMQ28_13980 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AMQ28_13980 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMQ28_13980 IPR004514 Glutamine-tRNA synthetase AMQ28_13980 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AMQ28_13980 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain AMQ28_13980 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily AMQ28_13980 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal AMQ28_13980 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily AMQ28_13980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMQ28_14030 IPR030390 RNA methyltransferase TrmA, active site AMQ28_14030 IPR010280 (Uracil-5)-methyltransferase family AMQ28_14030 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA AMQ28_14030 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMQ28_14030 IPR030391 RNA methyltransferase TrmA, conserved site AMQ28_14040 IPR003711 CarD-like/TRCF domain AMQ28_14040 IPR036101 CarD-like/TRCF domain superfamily AMQ28_14040 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMQ28_14040 IPR001650 Helicase, C-terminal AMQ28_14040 IPR004576 Transcription-repair coupling factor AMQ28_14040 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_14040 IPR037235 TRCF-like, C-terminal domain AMQ28_14040 IPR041471 UvrB, interaction domain AMQ28_14040 IPR005118 Transcription-repair-coupling factor, C-terminal domain AMQ28_14040 IPR011545 DEAD/DEAH box helicase domain AMQ28_14050 IPR029787 Nucleotide cyclase AMQ28_14050 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase AMQ28_14055 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMQ28_14055 IPR001055 Adrenodoxin AMQ28_14055 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria AMQ28_14055 IPR036010 2Fe-2S ferredoxin-like superfamily AMQ28_14055 IPR018298 Adrenodoxin, iron-sulphur binding site AMQ28_14055 IPR012675 Beta-grasp domain superfamily AMQ28_14060 IPR013126 Heat shock protein 70 family AMQ28_14060 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily AMQ28_14060 IPR018181 Heat shock protein 70, conserved site AMQ28_14060 IPR042039 HscA chaperone, nucleotide-binding domain AMQ28_14060 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily AMQ28_14060 IPR010236 ISC system FeS cluster assembly, HscA chaperone AMQ28_14065 IPR036869 Chaperone J-domain superfamily AMQ28_14065 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain AMQ28_14065 IPR036386 HscB, C-terminal domain superfamily AMQ28_14065 IPR004640 Co-chaperone Hsc20 AMQ28_14065 IPR001623 DnaJ domain AMQ28_14070 IPR016092 FeS cluster insertion protein AMQ28_14070 IPR000361 FeS cluster biogenesis AMQ28_14070 IPR017870 FeS cluster insertion, C-terminal, conserved site AMQ28_14070 IPR035903 HesB-like domain superfamily AMQ28_14070 IPR011302 Iron-binding protein IscA, proteobacteria AMQ28_14075 IPR011339 ISC system FeS cluster assembly, IscU scaffold AMQ28_14075 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal AMQ28_14080 IPR016454 Cysteine desulfurase AMQ28_14080 IPR010240 Cysteine desulfurase IscS AMQ28_14080 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMQ28_14080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMQ28_14080 IPR015424 Pyridoxal phosphate-dependent transferase AMQ28_14080 IPR000192 Aminotransferase class V domain AMQ28_14080 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMQ28_14085 IPR010242 Transcription factor HTH, IscR AMQ28_14085 IPR036388 Winged helix-like DNA-binding domain superfamily AMQ28_14085 IPR000944 Transcription regulator Rrf2-type AMQ28_14085 IPR036390 Winged helix DNA-binding domain superfamily AMQ28_14085 IPR030489 Transcription regulator Rrf2-type, conserved site AMQ28_14100 IPR020816 Histone-like DNA-binding protein, conserved site AMQ28_14100 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AMQ28_14100 IPR000119 Histone-like DNA-binding protein AMQ28_14105 IPR015391 SurA N-terminal AMQ28_14105 IPR023034 Peptidyl-prolyl isomerase SurA AMQ28_14105 IPR027304 Trigger factor/SurA domain superfamily AMQ28_14105 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AMQ28_14135 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMQ28_14135 IPR011611 Carbohydrate kinase PfkB AMQ28_14135 IPR029056 Ribokinase-like AMQ28_14145 IPR013578 Peptidase M16C associated AMQ28_14145 IPR007863 Peptidase M16, C-terminal AMQ28_14145 IPR011765 Peptidase M16, N-terminal AMQ28_14145 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AMQ28_14150 IPR036541 Phospholipase A1 superfamily AMQ28_14150 IPR003187 Phospholipase A1 AMQ28_14155 IPR003445 Cation transporter AMQ28_14155 IPR004772 TrkH potassium transport family AMQ28_14160 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AMQ28_14160 IPR006037 Regulator of K+ conductance, C-terminal AMQ28_14160 IPR036291 NAD(P)-binding domain superfamily AMQ28_14160 IPR003148 Regulator of K+ conductance, N-terminal AMQ28_14170 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMQ28_14170 IPR005787 Threonine dehydratase, biosynthetic AMQ28_14170 IPR001721 Threonine dehydratase, ACT-like domain AMQ28_14170 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AMQ28_14170 IPR038110 Threonine dehydratase, ACT-like domain superfamily AMQ28_14170 IPR001926 Pyridoxal-phosphate dependent enzyme AMQ28_14175 IPR037171 NagB/RpiA transferase-like AMQ28_14175 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup AMQ28_14175 IPR004788 Ribose 5-phosphate isomerase, type A AMQ28_14185 IPR000534 Semialdehyde dehydrogenase, NAD-binding AMQ28_14185 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AMQ28_14185 IPR036291 NAD(P)-binding domain superfamily AMQ28_14185 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 AMQ28_14185 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site AMQ28_14195 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AMQ28_14195 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMQ28_14195 IPR003769 Adaptor protein ClpS, core AMQ28_14200 IPR003593 AAA+ ATPase domain AMQ28_14200 IPR018368 ClpA/B, conserved site 1 AMQ28_14200 IPR019489 Clp ATPase, C-terminal AMQ28_14200 IPR036628 Clp, N-terminal domain superfamily AMQ28_14200 IPR004176 Clp, N-terminal AMQ28_14200 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA AMQ28_14200 IPR001270 ClpA/B family AMQ28_14200 IPR003959 ATPase, AAA-type, core AMQ28_14200 IPR028299 ClpA/B, conserved site 2 AMQ28_14200 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_14200 IPR041546 ClpA/ClpB, AAA lid domain AMQ28_14205 IPR003844 Uncharacterised protein family UPF0060 AMQ28_14210 IPR002292 Ornithine/putrescine carbamoyltransferase AMQ28_14210 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AMQ28_14210 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AMQ28_14210 IPR006130 Aspartate/ornithine carbamoyltransferase AMQ28_14210 IPR024904 Ornithine carbamoyltransferase AMQ28_14210 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AMQ28_14215 IPR001647 DNA-binding HTH domain, TetR-type AMQ28_14215 IPR009057 Homeobox-like domain superfamily AMQ28_14215 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMQ28_14220 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site AMQ28_14220 IPR039556 ICL/PEPM domain AMQ28_14220 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMQ28_14220 IPR012695 2-methylisocitrate lyase AMQ28_14220 IPR040442 Pyruvate kinase-like domain superfamily AMQ28_14225 IPR019810 Citrate synthase active site AMQ28_14225 IPR024176 Citrate synthase, bacterial-type AMQ28_14225 IPR016142 Citrate synthase-like, large alpha subdomain AMQ28_14225 IPR002020 Citrate synthase AMQ28_14225 IPR016143 Citrate synthase-like, small alpha subdomain AMQ28_14225 IPR036969 Citrate synthase superfamily AMQ28_14225 IPR011278 2-methylcitrate synthase/citrate synthase type I AMQ28_14240 IPR029062 Class I glutamine amidotransferase-like AMQ28_14240 IPR004468 CTP synthase AMQ28_14240 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMQ28_14240 IPR017456 CTP synthase, N-terminal AMQ28_14240 IPR017926 Glutamine amidotransferase AMQ28_14240 IPR033828 CTP synthase GATase domain AMQ28_14245 IPR013785 Aldolase-type TIM barrel AMQ28_14245 IPR006218 DAHP synthetase I/KDSA AMQ28_14245 IPR006269 3-deoxy-8-phosphooctulonate synthase AMQ28_14250 IPR020811 Enolase, N-terminal AMQ28_14250 IPR020809 Enolase, conserved site AMQ28_14250 IPR020810 Enolase, C-terminal TIM barrel domain AMQ28_14250 IPR029017 Enolase-like, N-terminal AMQ28_14250 IPR000941 Enolase AMQ28_14250 IPR036849 Enolase-like, C-terminal domain superfamily AMQ28_14255 IPR007060 Septum formation initiator FtsL/DivIC AMQ28_14255 IPR023081 Cell division protein FtsB AMQ28_14260 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site AMQ28_14260 IPR029044 Nucleotide-diphospho-sugar transferases AMQ28_14260 IPR034683 Cytidylyltransferase IspD/TarI AMQ28_14260 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMQ28_14265 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB AMQ28_14265 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site AMQ28_14265 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA