locus-tag class description CDG55_00050 IPR006120 Resolvase, HTH domain CDG55_00050 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CDG55_00050 IPR006119 Resolvase, N-terminal catalytic domain CDG55_00050 IPR006118 Recombinase, conserved site CDG55_00050 IPR009057 Homeobox-like domain superfamily CDG55_00055 IPR036390 Winged helix DNA-binding domain superfamily CDG55_00055 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_00055 IPR000525 Initiator Rep protein CDG55_00070 IPR035069 TTHA1013/TTHA0281-like CDG55_00070 IPR031807 HicB-like antitoxin of toxin-antitoxin system CDG55_00105 IPR000390 Small multidrug resistance protein family CDG55_00115 IPR036390 Winged helix DNA-binding domain superfamily CDG55_00115 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_00115 IPR000525 Initiator Rep protein CDG55_00135 IPR009057 Homeobox-like domain superfamily CDG55_00135 IPR001584 Integrase, catalytic core CDG55_00135 IPR012337 Ribonuclease H-like superfamily CDG55_00135 IPR036397 Ribonuclease H superfamily CDG55_00145 IPR005094 Endonuclease relaxase, MobA/VirD2 CDG55_00185 IPR003812 Fido domain CDG55_00185 IPR036597 Fido-like domain superfamily CDG55_00215 IPR025103 Protein of unknown function DUF4011 CDG55_00215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_00215 IPR041679 DNA2/NAM7 helicase-like, AAA domain CDG55_00215 IPR041677 DNA2/NAM7 helicase, AAA domain CDG55_00215 IPR025103 Protein of unknown function DUF4011 CDG55_00215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_00215 IPR041677 DNA2/NAM7 helicase, AAA domain CDG55_00215 IPR041679 DNA2/NAM7 helicase-like, AAA domain CDG55_00295 IPR010998 Integrase/recombinase, N-terminal CDG55_00295 IPR013762 Integrase-like, catalytic domain superfamily CDG55_00295 IPR002104 Integrase, catalytic domain CDG55_00295 IPR038488 Integrase, DNA-binding domain superfamily CDG55_00295 IPR025166 Integrase, DNA-binding domain CDG55_00295 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDG55_00320 IPR028345 Aminoglycoside 3-N-acetyltransferase-like CDG55_00320 IPR003679 Aminoglycoside N(3)-acetyltransferase CDG55_00325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_00370 IPR001460 Penicillin-binding protein, transpeptidase CDG55_00370 IPR012338 Beta-lactamase/transpeptidase-like CDG55_00385 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CDG55_00385 IPR001387 Cro/C1-type helix-turn-helix domain CDG55_00385 IPR014057 Uncharacterized protein HI1420 CDG55_00390 IPR009241 Toxin HigB-like CDG55_00390 IPR014056 Addiction module killer protein, predicted CDG55_00395 IPR025246 Transposase IS30-like HTH domain CDG55_00395 IPR001598 Transposase, IS30, conserved site CDG55_00395 IPR036397 Ribonuclease H superfamily CDG55_00395 IPR012337 Ribonuclease H-like superfamily CDG55_00395 IPR001584 Integrase, catalytic core CDG55_00415 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDG55_00415 IPR002423 Chaperonin Cpn60/TCP-1 family CDG55_00415 IPR001844 Chaperonin Cpn60 CDG55_00415 IPR018370 Chaperonin Cpn60, conserved site CDG55_00415 IPR027409 GroEL-like apical domain superfamily CDG55_00415 IPR027413 GroEL-like equatorial domain superfamily CDG55_00420 IPR018369 Chaperonin GroES, conserved site CDG55_00420 IPR037124 GroES chaperonin superfamily CDG55_00420 IPR020818 GroES chaperonin family CDG55_00420 IPR011032 GroES-like superfamily CDG55_00425 IPR004323 Divalent ion tolerance protein, CutA CDG55_00425 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDG55_00425 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDG55_00430 IPR036291 NAD(P)-binding domain superfamily CDG55_00430 IPR006311 Twin-arginine translocation pathway, signal sequence CDG55_00430 IPR000683 Oxidoreductase, N-terminal CDG55_00435 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) CDG55_00435 IPR013785 Aldolase-type TIM barrel CDG55_00435 IPR011060 Ribulose-phosphate binding barrel CDG55_00440 IPR037523 Vicinal oxygen chelate (VOC) domain CDG55_00440 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG55_00440 IPR000335 Bleomycin resistance protein CDG55_00445 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG55_00445 IPR001279 Metallo-beta-lactamase CDG55_00450 IPR012337 Ribonuclease H-like superfamily CDG55_00450 IPR025246 Transposase IS30-like HTH domain CDG55_00450 IPR001584 Integrase, catalytic core CDG55_00450 IPR036397 Ribonuclease H superfamily CDG55_00450 IPR001598 Transposase, IS30, conserved site CDG55_00480 IPR001584 Integrase, catalytic core CDG55_00480 IPR036397 Ribonuclease H superfamily CDG55_00480 IPR032874 DDE domain CDG55_00480 IPR012337 Ribonuclease H-like superfamily CDG55_00495 IPR006352 Phosphoglucosamine mutase, bacterial type CDG55_00495 IPR005841 Alpha-D-phosphohexomutase superfamily CDG55_00495 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CDG55_00495 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CDG55_00495 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CDG55_00495 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CDG55_00495 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CDG55_00495 IPR005843 Alpha-D-phosphohexomutase, C-terminal CDG55_00500 IPR006390 Dihydropteroate synthase CDG55_00500 IPR000489 Pterin-binding domain CDG55_00500 IPR011005 Dihydropteroate synthase-like CDG55_00515 IPR036397 Ribonuclease H superfamily CDG55_00515 IPR032874 DDE domain CDG55_00515 IPR001584 Integrase, catalytic core CDG55_00515 IPR012337 Ribonuclease H-like superfamily CDG55_00525 IPR005119 LysR, substrate-binding CDG55_00525 IPR000847 Transcription regulator HTH, LysR CDG55_00525 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_00525 IPR036390 Winged helix DNA-binding domain superfamily CDG55_00525 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain CDG55_00530 IPR032874 DDE domain CDG55_00530 IPR036397 Ribonuclease H superfamily CDG55_00530 IPR012337 Ribonuclease H-like superfamily CDG55_00530 IPR001584 Integrase, catalytic core CDG55_00575 IPR003115 ParB/Sulfiredoxin CDG55_00575 IPR004437 ParB/RepB/Spo0J partition protein CDG55_00575 IPR036086 ParB/Sulfiredoxin superfamily CDG55_00575 IPR041468 ParB/Spo0J, HTH domain CDG55_00580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_00580 IPR025669 AAA domain CDG55_00590 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CDG55_00590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_00590 IPR003356 DNA methylase, adenine-specific CDG55_00605 IPR004473 Restriction endonuclease, type I, HsdR CDG55_00605 IPR040980 SWI2/SNF2 ATPase CDG55_00605 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal CDG55_00605 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG55_00605 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_00605 IPR021810 Protein of unknown function DUF3387 CDG55_00625 IPR036597 Fido-like domain superfamily CDG55_00625 IPR003812 Fido domain CDG55_00655 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CDG55_00655 IPR025188 Domain of unknown function DUF4113 CDG55_00655 IPR001126 UmuC domain CDG55_00655 IPR017961 DNA polymerase, Y-family, little finger domain CDG55_00660 IPR036390 Winged helix DNA-binding domain superfamily CDG55_00660 IPR006199 LexA repressor, DNA-binding domain CDG55_00660 IPR036286 LexA/Signal peptidase-like superfamily CDG55_00660 IPR039418 LexA-like CDG55_00660 IPR006197 Peptidase S24, LexA-like CDG55_00660 IPR006200 Transcription regulator LexA CDG55_00660 IPR015927 Peptidase S24/S26A/S26B/S26C CDG55_00660 IPR011991 ArsR-like helix-turn-helix domain CDG55_00660 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_00675 IPR025161 Putative transposase IS4/IS5 family CDG55_00680 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CDG55_00680 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_00685 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CDG55_00685 IPR016161 Aldehyde/histidinol dehydrogenase CDG55_00685 IPR016163 Aldehyde dehydrogenase, C-terminal CDG55_00685 IPR015590 Aldehyde dehydrogenase domain CDG55_00685 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDG55_00685 IPR016162 Aldehyde dehydrogenase, N-terminal CDG55_00690 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG55_00690 IPR009057 Homeobox-like domain superfamily CDG55_00690 IPR018060 DNA binding HTH domain, AraC-type CDG55_00690 IPR020449 Transcription regulator HTH, AraC- type CDG55_00700 IPR025161 Putative transposase IS4/IS5 family CDG55_00710 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDG55_00710 IPR013762 Integrase-like, catalytic domain superfamily CDG55_00710 IPR002104 Integrase, catalytic domain CDG55_00710 IPR038488 Integrase, DNA-binding domain superfamily CDG55_00710 IPR025166 Integrase, DNA-binding domain CDG55_00710 IPR010998 Integrase/recombinase, N-terminal CDG55_00740 IPR032874 DDE domain CDG55_00740 IPR012337 Ribonuclease H-like superfamily CDG55_00740 IPR001584 Integrase, catalytic core CDG55_00740 IPR036397 Ribonuclease H superfamily CDG55_00745 IPR004630 Uncharacterised protein family UPF0324, bacteria CDG55_00745 IPR018383 Uncharacterised protein family UPF0324, prokaryote CDG55_00750 IPR036390 Winged helix DNA-binding domain superfamily CDG55_00750 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_00750 IPR000847 Transcription regulator HTH, LysR CDG55_00750 IPR005119 LysR, substrate-binding CDG55_00795 IPR036397 Ribonuclease H superfamily CDG55_00795 IPR012337 Ribonuclease H-like superfamily CDG55_00795 IPR009057 Homeobox-like domain superfamily CDG55_00795 IPR001584 Integrase, catalytic core CDG55_00805 IPR027469 Cation efflux transmembrane domain superfamily CDG55_00805 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CDG55_00805 IPR002524 Cation efflux protein CDG55_00810 IPR011794 Hg(II)-responsive transcriptional regulator CDG55_00810 IPR000551 MerR-type HTH domain CDG55_00810 IPR009061 Putative DNA-binding domain superfamily CDG55_00840 IPR041682 AAA domain, group 14 CDG55_00840 IPR025420 Domain of unknown function DUF4143 CDG55_00840 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_00915 IPR006119 Resolvase, N-terminal catalytic domain CDG55_00915 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CDG55_00915 IPR006118 Recombinase, conserved site CDG55_00915 IPR009057 Homeobox-like domain superfamily CDG55_00915 IPR006120 Resolvase, HTH domain CDG55_00935 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria CDG55_00935 IPR036010 2Fe-2S ferredoxin-like superfamily CDG55_00935 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDG55_00935 IPR001055 Adrenodoxin CDG55_00935 IPR018298 Adrenodoxin, iron-sulphur binding site CDG55_00935 IPR012675 Beta-grasp domain superfamily CDG55_00945 IPR015358 Transcription regulator MerR, DNA binding CDG55_00945 IPR000551 MerR-type HTH domain CDG55_00945 IPR011789 Cu(I)-responsive transcriptional regulator CDG55_00945 IPR009061 Putative DNA-binding domain superfamily CDG55_00950 IPR036412 HAD-like superfamily CDG55_00950 IPR023298 P-type ATPase, transmembrane domain superfamily CDG55_00950 IPR018303 P-type ATPase, phosphorylation site CDG55_00950 IPR023299 P-type ATPase, cytoplasmic domain N CDG55_00950 IPR008250 P-type ATPase, A domain superfamily CDG55_00950 IPR023214 HAD superfamily CDG55_00950 IPR036163 Heavy metal-associated domain superfamily CDG55_00950 IPR017969 Heavy-metal-associated, conserved site CDG55_00950 IPR001757 P-type ATPase CDG55_00950 IPR006121 Heavy metal-associated domain, HMA CDG55_00950 IPR027256 P-type ATPase, subfamily IB CDG55_00950 IPR006122 Heavy metal-associated domain, copper ion-binding CDG55_00955 IPR036390 Winged helix DNA-binding domain superfamily CDG55_00955 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_00955 IPR001845 HTH ArsR-type DNA-binding domain CDG55_00955 IPR011991 ArsR-like helix-turn-helix domain CDG55_00955 IPR018334 ArsR-type transcription regulator, HTH motif CDG55_00965 IPR027469 Cation efflux transmembrane domain superfamily CDG55_00965 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CDG55_00965 IPR023500 Zinc transporter ZitB CDG55_00965 IPR002524 Cation efflux protein CDG55_00985 IPR002575 Aminoglycoside phosphotransferase CDG55_00985 IPR011009 Protein kinase-like domain superfamily CDG55_01005 IPR012337 Ribonuclease H-like superfamily CDG55_01005 IPR036397 Ribonuclease H superfamily CDG55_01005 IPR001584 Integrase, catalytic core CDG55_01005 IPR009057 Homeobox-like domain superfamily CDG55_01030 IPR020449 Transcription regulator HTH, AraC- type CDG55_01030 IPR018062 HTH domain AraC-type, conserved site CDG55_01030 IPR018060 DNA binding HTH domain, AraC-type CDG55_01030 IPR029062 Class I glutamine amidotransferase-like CDG55_01030 IPR009057 Homeobox-like domain superfamily CDG55_01040 IPR001460 Penicillin-binding protein, transpeptidase CDG55_01040 IPR012338 Beta-lactamase/transpeptidase-like CDG55_01050 IPR012337 Ribonuclease H-like superfamily CDG55_01050 IPR036397 Ribonuclease H superfamily CDG55_01050 IPR009057 Homeobox-like domain superfamily CDG55_01050 IPR001584 Integrase, catalytic core CDG55_01085 IPR000477 Reverse transcriptase domain CDG55_01085 IPR024937 Domain X CDG55_01110 IPR001584 Integrase, catalytic core CDG55_01110 IPR032874 DDE domain CDG55_01110 IPR012337 Ribonuclease H-like superfamily CDG55_01110 IPR036397 Ribonuclease H superfamily CDG55_01115 IPR015358 Transcription regulator MerR, DNA binding CDG55_01115 IPR011794 Hg(II)-responsive transcriptional regulator CDG55_01115 IPR009061 Putative DNA-binding domain superfamily CDG55_01115 IPR000551 MerR-type HTH domain CDG55_01120 IPR003457 Mercuric transport protein MerT CDG55_01125 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ CDG55_01125 IPR011795 Mercuric transport protein periplasmic component CDG55_01125 IPR036163 Heavy metal-associated domain superfamily CDG55_01125 IPR006121 Heavy metal-associated domain, HMA CDG55_01125 IPR017969 Heavy-metal-associated, conserved site CDG55_01130 IPR004891 Mercury transport protein MerC CDG55_01135 IPR006121 Heavy metal-associated domain, HMA CDG55_01135 IPR017969 Heavy-metal-associated, conserved site CDG55_01135 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_01135 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CDG55_01135 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDG55_01135 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CDG55_01135 IPR021179 Mercury(II) reductase CDG55_01135 IPR036163 Heavy metal-associated domain superfamily CDG55_01135 IPR023753 FAD/NAD(P)-binding domain CDG55_01135 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CDG55_01140 IPR000551 MerR-type HTH domain CDG55_01140 IPR011797 Mercuric resistence transcriptional repressor protein MerD CDG55_01140 IPR009061 Putative DNA-binding domain superfamily CDG55_01145 IPR007746 Broad mercury transporter MerE CDG55_01155 IPR001633 EAL domain CDG55_01155 IPR021767 Transposon Tn21 modulator protein CDG55_01155 IPR035919 EAL domain superfamily CDG55_01170 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDG55_01170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_01175 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CDG55_01175 IPR010921 Trp repressor/replication initiator CDG55_01175 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_01175 IPR038454 DnaA, N-terminal domain superfamily CDG55_01175 IPR024633 DnaA N-terminal domain CDG55_01175 IPR003593 AAA+ ATPase domain CDG55_01175 IPR001957 Chromosomal replication control, initiator DnaA CDG55_01175 IPR020591 Chromosomal replication control, initiator DnaA-like CDG55_01175 IPR013159 Chromosomal replication initiator, DnaA C-terminal CDG55_01175 IPR013317 Chromosomal replication initiator protein DnaA CDG55_01180 IPR022637 DNA polymerase III, beta sliding clamp, central CDG55_01180 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal CDG55_01180 IPR001001 DNA polymerase III, beta sliding clamp CDG55_01180 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal CDG55_01185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_01185 IPR003395 RecF/RecN/SMC, N-terminal CDG55_01185 IPR042174 DNA-binding RecF, domain 2 CDG55_01185 IPR001238 DNA-binding, RecF CDG55_01190 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_01190 IPR011557 DNA gyrase, subunit B CDG55_01190 IPR002288 DNA gyrase B subunit, C-terminal CDG55_01190 IPR006171 TOPRIM domain CDG55_01190 IPR018522 DNA topoisomerase, type IIA, conserved site CDG55_01190 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CDG55_01190 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CDG55_01190 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CDG55_01190 IPR001241 DNA topoisomerase, type IIA CDG55_01190 IPR034160 DNA gyrase subunit B, TOPRIM domain CDG55_01190 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_01190 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_01190 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG55_01190 IPR041423 DNA gyrase subunit B insert domain CDG55_01195 IPR032816 SNARE associated Golgi protein CDG55_01195 IPR032818 DedA family CDG55_01200 IPR032781 ABC-transporter extension domain CDG55_01200 IPR003439 ABC transporter-like CDG55_01200 IPR003593 AAA+ ATPase domain CDG55_01200 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_01200 IPR017871 ABC transporter, conserved site CDG55_01205 IPR038404 TRAP transporter solute receptor DctP superfamily CDG55_01210 IPR038404 TRAP transporter solute receptor DctP superfamily CDG55_01215 IPR038404 TRAP transporter solute receptor DctP superfamily CDG55_01220 IPR038404 TRAP transporter solute receptor DctP superfamily CDG55_01225 IPR038404 TRAP transporter solute receptor DctP superfamily CDG55_01230 IPR000361 FeS cluster biogenesis CDG55_01230 IPR035903 HesB-like domain superfamily CDG55_01230 IPR023063 FeS cluster insertion protein ErpA CDG55_01230 IPR017870 FeS cluster insertion, C-terminal, conserved site CDG55_01230 IPR016092 FeS cluster insertion protein CDG55_01235 IPR005338 Anhydro-N-acetylmuramic acid kinase CDG55_01240 IPR002307 Tyrosine-tRNA ligase CDG55_01240 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDG55_01240 IPR002305 Aminoacyl-tRNA synthetase, class Ic CDG55_01240 IPR002942 RNA-binding S4 domain CDG55_01240 IPR036986 RNA-binding S4 domain superfamily CDG55_01240 IPR024088 Tyrosine-tRNA ligase, bacterial-type CDG55_01240 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 CDG55_01240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_01275 IPR025668 Transposase DDE domain CDG55_01295 IPR016163 Aldehyde dehydrogenase, C-terminal CDG55_01295 IPR016161 Aldehyde/histidinol dehydrogenase CDG55_01295 IPR015590 Aldehyde dehydrogenase domain CDG55_01295 IPR016162 Aldehyde dehydrogenase, N-terminal CDG55_01295 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDG55_01300 IPR000175 Sodium:neurotransmitter symporter CDG55_01300 IPR037272 Sodium:neurotransmitter symporter superfamily CDG55_01310 IPR035926 NusB-like superfamily CDG55_01310 IPR006027 NusB/RsmB/TIM44 CDG55_01310 IPR023267 RNA (C5-cytosine) methyltransferase CDG55_01310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_01310 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CDG55_01310 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CDG55_01310 IPR004573 rRNA small subunit methyltransferase B CDG55_01315 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CDG55_01315 IPR037022 Formyl transferase, C-terminal domain superfamily CDG55_01315 IPR002376 Formyl transferase, N-terminal CDG55_01315 IPR036477 Formyl transferase, N-terminal domain superfamily CDG55_01315 IPR011034 Formyl transferase-like, C-terminal domain superfamily CDG55_01315 IPR005793 Formyl transferase, C-terminal CDG55_01315 IPR005794 Methionyl-tRNA formyltransferase CDG55_01320 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CDG55_01320 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CDG55_01320 IPR004404 Dihydroxy-acid dehydratase CDG55_01320 IPR042096 Dihydroxy-acid dehydratase, C-terminal CDG55_01320 IPR037237 IlvD/EDD, N-terminal domain CDG55_01330 IPR006043 Xanthine/uracil/vitamin C permease CDG55_01330 IPR019918 Pyrimidine permease RutG, predicted CDG55_01330 IPR006042 Xanthine/uracil permease CDG55_01335 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CDG55_01335 IPR021135 Phosphoenolpyruvate carboxylase CDG55_01335 IPR033129 Phosphoenolpyruvate carboxylase, His active site CDG55_01335 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site CDG55_01335 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type CDG55_01350 IPR001036 Acriflavin resistance protein CDG55_01350 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG55_01360 IPR001623 DnaJ domain CDG55_01360 IPR002939 Chaperone DnaJ, C-terminal CDG55_01360 IPR036869 Chaperone J-domain superfamily CDG55_01360 IPR018253 DnaJ domain, conserved site CDG55_01360 IPR008971 HSP40/DnaJ peptide-binding CDG55_01360 IPR012724 Chaperone DnaJ CDG55_01360 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CDG55_01360 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CDG55_01365 IPR036291 NAD(P)-binding domain superfamily CDG55_01365 IPR023940 Dihydrodipicolinate reductase CDG55_01365 IPR000846 Dihydrodipicolinate reductase, N-terminal CDG55_01365 IPR022664 Dihydrodipicolinate reductase, conserved site CDG55_01365 IPR022663 Dihydrodipicolinate reductase, C-terminal CDG55_01375 IPR005119 LysR, substrate-binding CDG55_01375 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_01375 IPR000847 Transcription regulator HTH, LysR CDG55_01375 IPR036390 Winged helix DNA-binding domain superfamily CDG55_01385 IPR036291 NAD(P)-binding domain superfamily CDG55_01385 IPR013154 Alcohol dehydrogenase, N-terminal CDG55_01385 IPR011032 GroES-like superfamily CDG55_01385 IPR020843 Polyketide synthase, enoylreductase domain CDG55_01385 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDG55_01385 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDG55_01385 IPR013149 Alcohol dehydrogenase, C-terminal CDG55_01390 IPR005019 Methyladenine glycosylase CDG55_01390 IPR011257 DNA glycosylase CDG55_01390 IPR004597 DNA-3-methyladenine glycosylase I CDG55_01405 IPR029119 MutY, C-terminal CDG55_01405 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CDG55_01405 IPR000445 Helix-hairpin-helix motif CDG55_01405 IPR015797 NUDIX hydrolase-like domain superfamily CDG55_01405 IPR004035 Endonuclease III, iron-sulphur binding site CDG55_01405 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CDG55_01405 IPR004036 Endonuclease III-like, conserved site-2 CDG55_01405 IPR011257 DNA glycosylase CDG55_01405 IPR005760 A/G-specific adenine glycosylase MutY CDG55_01405 IPR003265 HhH-GPD domain CDG55_01415 IPR009760 Protein of unknown function DUF1328 CDG55_01420 IPR008228 Uncharacterised conserved protein UCP006173 CDG55_01420 IPR005358 Putative zinc- or iron-chelating domain containing protein CDG55_01430 IPR003959 ATPase, AAA-type, core CDG55_01430 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CDG55_01430 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_01430 IPR032423 AAA C-terminal domain CDG55_01430 IPR021886 MgsA AAA+ ATPase C-terminal CDG55_01430 IPR003593 AAA+ ATPase domain CDG55_01450 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase CDG55_01450 IPR018236 SAICAR synthetase, conserved site CDG55_01450 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CDG55_01450 IPR028923 SAICAR synthetase/ADE2, N-terminal CDG55_01460 IPR020624 Schiff base-forming aldolase, conserved site CDG55_01460 IPR002220 DapA-like CDG55_01460 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CDG55_01460 IPR013785 Aldolase-type TIM barrel CDG55_01460 IPR020625 Schiff base-forming aldolase, active site CDG55_01465 IPR000868 Isochorismatase-like CDG55_01465 IPR036380 Isochorismatase-like superfamily CDG55_01470 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG55_01470 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDG55_01470 IPR000485 AsnC-type HTH domain CDG55_01470 IPR011991 ArsR-like helix-turn-helix domain CDG55_01470 IPR011008 Dimeric alpha-beta barrel CDG55_01470 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_01470 IPR019888 Transcription regulator AsnC-type CDG55_01470 IPR036390 Winged helix DNA-binding domain superfamily CDG55_01480 IPR029055 Nucleophile aminohydrolases, N-terminal CDG55_01480 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CDG55_01480 IPR035490 GlmS/FrlB, SIS domain 2 CDG55_01480 IPR035466 GlmS/AgaS, SIS domain 1 CDG55_01480 IPR017932 Glutamine amidotransferase type 2 domain CDG55_01480 IPR001347 Sugar isomerase (SIS) CDG55_01485 IPR029044 Nucleotide-diphospho-sugar transferases CDG55_01485 IPR011004 Trimeric LpxA-like superfamily CDG55_01485 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CDG55_01485 IPR025877 MobA-like NTP transferase CDG55_01485 IPR018357 Hexapeptide transferase, conserved site CDG55_01485 IPR001451 Hexapeptide repeat CDG55_01485 IPR038009 GlmU, C-terminal LbH domain CDG55_01490 IPR007686 YutG/PgpA domain CDG55_01490 IPR036681 PgpA-like superfamily CDG55_01490 IPR026037 Phosphatidylglycerophosphatase A CDG55_01495 IPR036676 PurM-like, C-terminal domain superfamily CDG55_01495 IPR016188 PurM-like, N-terminal domain CDG55_01495 IPR036921 PurM-like, N-terminal domain superfamily CDG55_01495 IPR006283 Thiamine-monophosphate kinase CDG55_01495 IPR010918 PurM-like, C-terminal domain CDG55_01500 IPR006027 NusB/RsmB/TIM44 CDG55_01500 IPR011605 NusB antitermination factor CDG55_01500 IPR035926 NusB-like superfamily CDG55_01505 IPR034964 Lumazine synthase CDG55_01505 IPR002180 Lumazine/riboflavin synthase CDG55_01505 IPR036467 Lumazine/riboflavin synthase superfamily CDG55_01510 IPR032677 GTP cyclohydrolase II CDG55_01510 IPR036144 RibA-like superfamily CDG55_01510 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CDG55_01510 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDG55_01520 IPR023214 HAD superfamily CDG55_01520 IPR036412 HAD-like superfamily CDG55_01520 IPR023190 Phosphoserine phosphatase, domain 2 CDG55_01520 IPR002912 ACT domain CDG55_01535 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CDG55_01535 IPR003732 D-aminoacyl-tRNA deacylase DTD CDG55_01540 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain CDG55_01540 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase CDG55_01540 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CDG55_01540 IPR007229 Nicotinate phosphoribosyltransferase family CDG55_01540 IPR006406 Nicotinate phosphoribosyltransferase CDG55_01545 IPR001307 Thiosulphate sulfurtransferase, conserved site CDG55_01545 IPR001763 Rhodanese-like domain CDG55_01545 IPR036873 Rhodanese-like domain superfamily CDG55_01550 IPR003817 Phosphatidylserine decarboxylase-related CDG55_01550 IPR033177 Phosphatidylserine decarboxylase CDG55_01550 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 CDG55_01575 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR CDG55_01575 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDG55_01575 IPR021766 Phosphate regulon sensor protein PhoR CDG55_01575 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDG55_01575 IPR000014 PAS domain CDG55_01575 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_01575 IPR035965 PAS domain superfamily CDG55_01575 IPR013767 PAS fold CDG55_01575 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDG55_01575 IPR005467 Histidine kinase domain CDG55_01575 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_01580 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_01580 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB CDG55_01580 IPR039420 Transcriptional regulatory protein WalR-like CDG55_01580 IPR001789 Signal transduction response regulator, receiver domain CDG55_01580 IPR011006 CheY-like superfamily CDG55_01580 IPR001867 OmpR/PhoB-type DNA-binding domain CDG55_01580 IPR016032 Signal transduction response regulator, C-terminal effector CDG55_01590 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_01590 IPR036291 NAD(P)-binding domain superfamily CDG55_01590 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDG55_01595 IPR002528 Multi antimicrobial extrusion protein CDG55_01600 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_01600 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_01600 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_01600 IPR004839 Aminotransferase, class I/classII CDG55_01610 IPR007383 Protein of unknown function DUF445 CDG55_01625 IPR007370 Glutamate--cysteine ligase CDG55_01625 IPR006334 Glutamate--cysteine ligase, monofunctional CDG55_01625 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CDG55_01630 IPR022920 Disulphide bond formation protein DsbB CDG55_01630 IPR023380 DsbB-like superfamily CDG55_01630 IPR003752 Disulphide bond formation protein DsbB/BdbC CDG55_01645 IPR029058 Alpha/Beta hydrolase fold CDG55_01645 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CDG55_01650 IPR002288 DNA gyrase B subunit, C-terminal CDG55_01650 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_01650 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_01650 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG55_01650 IPR001241 DNA topoisomerase, type IIA CDG55_01650 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CDG55_01650 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CDG55_01650 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CDG55_01650 IPR018522 DNA topoisomerase, type IIA, conserved site CDG55_01650 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative CDG55_01650 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_01650 IPR006171 TOPRIM domain CDG55_01655 IPR039570 AmiC, periplasmic binding domain CDG55_01655 IPR028082 Periplasmic binding protein-like I CDG55_01655 IPR000709 Leu/Ile/Val-binding protein CDG55_01660 IPR001851 ABC transporter, permease CDG55_01670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_01670 IPR003439 ABC transporter-like CDG55_01670 IPR017871 ABC transporter, conserved site CDG55_01670 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDG55_01670 IPR003593 AAA+ ATPase domain CDG55_01675 IPR017871 ABC transporter, conserved site CDG55_01675 IPR003439 ABC transporter-like CDG55_01675 IPR003593 AAA+ ATPase domain CDG55_01675 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CDG55_01675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_01680 IPR000182 GNAT domain CDG55_01680 IPR016181 Acyl-CoA N-acyltransferase CDG55_01705 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CDG55_01705 IPR017937 Thioredoxin, conserved site CDG55_01705 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CDG55_01705 IPR036249 Thioredoxin-like superfamily CDG55_01705 IPR022910 Thiol:disulphide interchange protein DsbD CDG55_01705 IPR013766 Thioredoxin domain CDG55_01705 IPR035671 DsbD gamma CDG55_01705 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CDG55_01715 IPR000160 GGDEF domain CDG55_01715 IPR029787 Nucleotide cyclase CDG55_01715 IPR033416 Periplasmic sensor domain CHASE7 CDG55_01720 IPR033140 Lipase, GDXG, putative serine active site CDG55_01720 IPR002168 Lipase, GDXG, putative histidine active site CDG55_01720 IPR013094 Alpha/beta hydrolase fold-3 CDG55_01720 IPR029058 Alpha/Beta hydrolase fold CDG55_01730 IPR006504 Transcriptional regulator Spx/MgsR CDG55_01730 IPR036249 Thioredoxin-like superfamily CDG55_01730 IPR006660 Arsenate reductase-like CDG55_01735 IPR020848 AP endonuclease 1, conserved site CDG55_01735 IPR020847 AP endonuclease 1, binding site CDG55_01735 IPR004808 AP endonuclease 1 CDG55_01735 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDG55_01735 IPR005135 Endonuclease/exonuclease/phosphatase CDG55_01740 IPR029057 Phosphoribosyltransferase-like CDG55_01740 IPR000836 Phosphoribosyltransferase domain CDG55_01740 IPR004467 Orotate phosphoribosyl transferase domain CDG55_01740 IPR023031 Orotate phosphoribosyltransferase CDG55_01750 IPR003615 HNH nuclease CDG55_01755 IPR001525 C-5 cytosine methyltransferase CDG55_01755 IPR018117 DNA methylase, C-5 cytosine-specific, active site CDG55_01755 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site CDG55_01755 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_01765 IPR000835 MarR-type HTH domain CDG55_01765 IPR036390 Winged helix DNA-binding domain superfamily CDG55_01765 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_01770 IPR000889 Glutathione peroxidase CDG55_01770 IPR029760 Glutathione peroxidase conserved site CDG55_01770 IPR029759 Glutathione peroxidase active site CDG55_01770 IPR036249 Thioredoxin-like superfamily CDG55_01775 IPR004215 Prokaryotic glutathione synthetase, N-terminal CDG55_01775 IPR006284 Glutathione synthetase, prokaryotic CDG55_01775 IPR011761 ATP-grasp fold CDG55_01775 IPR004218 Prokaryotic glutathione synthetase, ATP-binding CDG55_01775 IPR013815 ATP-grasp fold, subdomain 1 CDG55_01775 IPR016185 Pre-ATP-grasp domain superfamily CDG55_01780 IPR006009 N-acetylglucosaminyltransferase, MurG CDG55_01780 IPR007235 Glycosyl transferase, family 28, C-terminal CDG55_01780 IPR004276 Glycosyltransferase family 28, N-terminal domain CDG55_01785 IPR036565 Mur-like, catalytic domain superfamily CDG55_01785 IPR004101 Mur ligase, C-terminal CDG55_01785 IPR036615 Mur ligase, C-terminal domain superfamily CDG55_01785 IPR013221 Mur ligase, central CDG55_01785 IPR000713 Mur ligase, N-terminal catalytic domain CDG55_01785 IPR005758 UDP-N-acetylmuramate--L-alanine ligase CDG55_01790 IPR016185 Pre-ATP-grasp domain superfamily CDG55_01790 IPR013815 ATP-grasp fold, subdomain 1 CDG55_01790 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CDG55_01790 IPR011095 D-alanine--D-alanine ligase, C-terminal CDG55_01790 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CDG55_01790 IPR011761 ATP-grasp fold CDG55_01790 IPR005905 D-alanine--D-alanine ligase CDG55_01795 IPR005548 Cell division protein FtsQ/DivIB CDG55_01795 IPR013685 POTRA domain, FtsQ-type CDG55_01795 IPR034746 POTRA domain CDG55_01795 IPR026579 Cell division protein FtsQ CDG55_01800 IPR020823 Cell division protein FtsA CDG55_01800 IPR003494 SHS2 domain inserted in FtsA CDG55_01805 IPR020805 Cell division protein FtsZ, conserved site CDG55_01805 IPR000158 Cell division protein FtsZ CDG55_01805 IPR008280 Tubulin/FtsZ, C-terminal CDG55_01805 IPR003008 Tubulin/FtsZ, GTPase domain CDG55_01805 IPR024757 Cell division protein FtsZ, C-terminal CDG55_01805 IPR036525 Tubulin/FtsZ, GTPase domain superfamily CDG55_01805 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CDG55_01810 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal CDG55_01810 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase CDG55_01810 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal CDG55_01810 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_01825 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CDG55_01825 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal CDG55_01825 IPR004660 Pyruvate dehydrogenase E1 component CDG55_01825 IPR005474 Transketolase, N-terminal CDG55_01825 IPR041621 Pyruvate dehydrogenase E1 component, middle domain CDG55_01825 IPR029061 Thiamin diphosphate-binding fold CDG55_01830 IPR000089 Biotin/lipoyl attachment CDG55_01830 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CDG55_01830 IPR036625 E3-binding domain superfamily CDG55_01830 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex CDG55_01830 IPR004167 Peripheral subunit-binding domain CDG55_01830 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CDG55_01830 IPR011053 Single hybrid motif CDG55_01830 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDG55_01845 IPR001727 Gdt1 family CDG55_01850 IPR008254 Flavodoxin/nitric oxide synthase CDG55_01850 IPR001226 Flavodoxin, conserved site CDG55_01850 IPR029039 Flavoprotein-like superfamily CDG55_01850 IPR001279 Metallo-beta-lactamase CDG55_01850 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG55_01850 IPR012349 FMN-binding split barrel CDG55_01850 IPR002563 Flavin reductase like domain CDG55_01855 IPR005358 Putative zinc- or iron-chelating domain containing protein CDG55_01860 IPR013785 Aldolase-type TIM barrel CDG55_01860 IPR000644 CBS domain CDG55_01860 IPR005990 Inosine-5'-monophosphate dehydrogenase CDG55_01860 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CDG55_01860 IPR001093 IMP dehydrogenase/GMP reductase CDG55_01865 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CDG55_01865 IPR006352 Phosphoglucosamine mutase, bacterial type CDG55_01865 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CDG55_01865 IPR005841 Alpha-D-phosphohexomutase superfamily CDG55_01865 IPR005843 Alpha-D-phosphohexomutase, C-terminal CDG55_01865 IPR016066 Alpha-D-phosphohexomutase, conserved site CDG55_01865 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CDG55_01865 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CDG55_01865 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CDG55_01870 IPR012349 FMN-binding split barrel CDG55_01870 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal CDG55_01870 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative CDG55_01870 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site CDG55_01870 IPR000659 Pyridoxamine 5'-phosphate oxidase CDG55_01875 IPR001667 DDH domain CDG55_01875 IPR041122 RecJ, OB domain CDG55_01875 IPR004610 Bacterial RecJ exonuclease CDG55_01875 IPR003156 DHHA1 domain CDG55_01875 IPR038763 DHH phosphoesterase superfamily CDG55_01895 IPR013785 Aldolase-type TIM barrel CDG55_01895 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDG55_01905 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal CDG55_01905 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily CDG55_01905 IPR039901 3-deoxy-D-manno-octulosonic acid transferase CDG55_01910 IPR006700 Ribosomal RNA small subunit methyltransferase E CDG55_01910 IPR029028 Alpha/beta knot methyltransferases CDG55_01910 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG55_01915 IPR006685 Mechanosensitive ion channel MscS CDG55_01915 IPR011066 Mechanosensitive ion channel MscS, C-terminal CDG55_01915 IPR006686 Mechanosensitive ion channel MscS, conserved site CDG55_01915 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CDG55_01915 IPR023408 Mechanosensitive ion channel MscS domain superfamily CDG55_01915 IPR010920 LSM domain superfamily CDG55_01925 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain CDG55_01925 IPR042099 AMP-dependent synthetase-like superfamily CDG55_01925 IPR000873 AMP-dependent synthetase/ligase CDG55_01925 IPR020845 AMP-binding, conserved site CDG55_01925 IPR025110 AMP-binding enzyme, C-terminal domain CDG55_01925 IPR011904 Acetate-CoA ligase CDG55_01930 IPR000868 Isochorismatase-like CDG55_01930 IPR036380 Isochorismatase-like superfamily CDG55_01935 IPR036390 Winged helix DNA-binding domain superfamily CDG55_01935 IPR019888 Transcription regulator AsnC-type CDG55_01935 IPR011008 Dimeric alpha-beta barrel CDG55_01935 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_01935 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG55_01935 IPR000485 AsnC-type HTH domain CDG55_01940 IPR036661 Luciferase-like domain superfamily CDG55_01940 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG CDG55_01940 IPR011251 Luciferase-like domain CDG55_01945 IPR029039 Flavoprotein-like superfamily CDG55_01945 IPR005025 NADPH-dependent FMN reductase-like CDG55_01945 IPR019912 FMN reductase, MsuE-like CDG55_01950 IPR000792 Transcription regulator LuxR, C-terminal CDG55_01950 IPR011006 CheY-like superfamily CDG55_01950 IPR016032 Signal transduction response regulator, C-terminal effector CDG55_01950 IPR001789 Signal transduction response regulator, receiver domain CDG55_01970 IPR017871 ABC transporter, conserved site CDG55_01970 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_01970 IPR004602 UvrABC system subunit A CDG55_01970 IPR041552 UvrA DNA-binding domain CDG55_01970 IPR003439 ABC transporter-like CDG55_01970 IPR041102 UvrA, interaction domain CDG55_01985 IPR016084 Haem oxygenase-like, multi-helical CDG55_01985 IPR034291 Thiamine phosphate synthase CDG55_01985 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CDG55_01985 IPR036206 Thiamin phosphate synthase superfamily CDG55_01985 IPR022998 Thiamine phosphate synthase/TenI CDG55_01985 IPR013785 Aldolase-type TIM barrel CDG55_01985 IPR004305 Thiaminase-2/PQQC CDG55_01985 IPR029056 Ribokinase-like CDG55_01985 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CDG55_01995 IPR011701 Major facilitator superfamily CDG55_01995 IPR036259 MFS transporter superfamily CDG55_01995 IPR020846 Major facilitator superfamily domain CDG55_02000 IPR012340 Nucleic acid-binding, OB-fold CDG55_02000 IPR000424 Primosome PriB/single-strand DNA-binding CDG55_02000 IPR011344 Single-stranded DNA-binding protein CDG55_02005 IPR012093 Pirin CDG55_02005 IPR008778 Pirin, C-terminal domain CDG55_02005 IPR003829 Pirin, N-terminal domain CDG55_02005 IPR014710 RmlC-like jelly roll fold CDG55_02005 IPR011051 RmlC-like cupin domain superfamily CDG55_02010 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_02010 IPR002937 Amine oxidase CDG55_02010 IPR014103 Zeta-carotene desaturase CDG55_02035 IPR025758 Fic/DOC N-terminal CDG55_02035 IPR003812 Fido domain CDG55_02035 IPR036597 Fido-like domain superfamily CDG55_02035 IPR040198 Fido domain-containing protein CDG55_02035 IPR026287 Protein adenylyltransferase SoFic-like CDG55_02115 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CDG55_02115 IPR008278 4'-phosphopantetheinyl transferase domain CDG55_02115 IPR002582 Holo-[acyl carrier protein] synthase CDG55_02115 IPR004568 Phosphopantetheine-protein transferase domain CDG55_02180 IPR004107 Integrase, SAM-like, N-terminal CDG55_02180 IPR038488 Integrase, DNA-binding domain superfamily CDG55_02180 IPR010998 Integrase/recombinase, N-terminal CDG55_02180 IPR025166 Integrase, DNA-binding domain CDG55_02180 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDG55_02180 IPR013762 Integrase-like, catalytic domain superfamily CDG55_02180 IPR002104 Integrase, catalytic domain CDG55_02190 IPR023051 Potassium uptake protein, low affinity, Kup CDG55_02190 IPR003855 Potassium transporter CDG55_02215 IPR013785 Aldolase-type TIM barrel CDG55_02215 IPR006062 Histidine biosynthesis CDG55_02215 IPR004651 Histidine biosynthesis, HisF CDG55_02215 IPR011060 Ribulose-phosphate binding barrel CDG55_02220 IPR005280 Homoserine kinase, type II CDG55_02220 IPR002575 Aminoglycoside phosphotransferase CDG55_02220 IPR011009 Protein kinase-like domain superfamily CDG55_02235 IPR011008 Dimeric alpha-beta barrel CDG55_02235 IPR007138 Antibiotic biosynthesis monooxygenase domain CDG55_02250 IPR011060 Ribulose-phosphate binding barrel CDG55_02250 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CDG55_02250 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA CDG55_02250 IPR006062 Histidine biosynthesis CDG55_02250 IPR013785 Aldolase-type TIM barrel CDG55_02260 IPR017926 Glutamine amidotransferase CDG55_02260 IPR029062 Class I glutamine amidotransferase-like CDG55_02260 IPR010139 Imidazole glycerol phosphate synthase, subunit H CDG55_02265 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_02265 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site CDG55_02265 IPR000807 Imidazoleglycerol-phosphate dehydratase CDG55_02265 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily CDG55_02290 IPR017821 Succinate CoA transferase CDG55_02290 IPR003702 Acetyl-CoA hydrolase/transferase CDG55_02290 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily CDG55_02290 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CDG55_02290 IPR037171 NagB/RpiA transferase-like CDG55_02295 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDG55_02295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDG55_02295 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDG55_02295 IPR003660 HAMP domain CDG55_02295 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_02295 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_02295 IPR005467 Histidine kinase domain CDG55_02300 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_02300 IPR039420 Transcriptional regulatory protein WalR-like CDG55_02300 IPR001789 Signal transduction response regulator, receiver domain CDG55_02300 IPR011006 CheY-like superfamily CDG55_02300 IPR001867 OmpR/PhoB-type DNA-binding domain CDG55_02300 IPR016032 Signal transduction response regulator, C-terminal effector CDG55_02305 IPR022967 RNA-binding domain, S1 CDG55_02305 IPR032639 Tex protein, YqgF-like domain CDG55_02305 IPR041692 HHH domain 9 CDG55_02305 IPR006641 YqgF/RNase H-like domain CDG55_02305 IPR037027 YqgF/RNase H-like domain superfamily CDG55_02305 IPR012340 Nucleic acid-binding, OB-fold CDG55_02305 IPR023319 Tex-like protein, HTH domain superfamily CDG55_02305 IPR023323 Tex-like domain superfamily CDG55_02305 IPR003029 S1 domain CDG55_02305 IPR010994 RuvA domain 2-like CDG55_02305 IPR012337 Ribonuclease H-like superfamily CDG55_02305 IPR018974 Tex-like protein, N-terminal CDG55_02325 IPR036291 NAD(P)-binding domain superfamily CDG55_02325 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_02325 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDG55_02330 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_02330 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CDG55_02330 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase CDG55_02330 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_02330 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_02335 IPR003439 ABC transporter-like CDG55_02335 IPR022374 Energy-dependent translational throttle protein EttA CDG55_02335 IPR003593 AAA+ ATPase domain CDG55_02335 IPR032781 ABC-transporter extension domain CDG55_02335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_02335 IPR017871 ABC transporter, conserved site CDG55_02350 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB CDG55_02350 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG55_02350 IPR006143 RND efflux pump, membrane fusion protein CDG55_02355 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG55_02355 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CDG55_02355 IPR001036 Acriflavin resistance protein CDG55_02360 IPR027469 Cation efflux transmembrane domain superfamily CDG55_02360 IPR002524 Cation efflux protein CDG55_02360 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CDG55_02390 IPR004840 Amino acid permease, conserved site CDG55_02390 IPR004841 Amino acid permease/ SLC12A domain CDG55_02405 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CDG55_02405 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CDG55_02405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_02405 IPR033910 Glutamyl-tRNA synthetase CDG55_02405 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CDG55_02405 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CDG55_02405 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CDG55_02405 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDG55_02415 IPR005669 Thiosulphate/Sulfate-binding protein CDG55_02415 IPR034408 Sulphate/thiosulphate-binding site CDG55_02415 IPR000957 Sulphate/thiosulphate-binding, conserved site CDG55_02420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_02420 IPR002903 Ribosomal RNA small subunit methyltransferase H CDG55_02420 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily CDG55_02430 IPR037532 Peptidoglycan D,D-transpeptidase FtsI CDG55_02430 IPR012338 Beta-lactamase/transpeptidase-like CDG55_02430 IPR005311 Penicillin-binding protein, dimerisation domain CDG55_02430 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CDG55_02430 IPR001460 Penicillin-binding protein, transpeptidase CDG55_02435 IPR036615 Mur ligase, C-terminal domain superfamily CDG55_02435 IPR004101 Mur ligase, C-terminal CDG55_02435 IPR036565 Mur-like, catalytic domain superfamily CDG55_02435 IPR000713 Mur ligase, N-terminal catalytic domain CDG55_02435 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CDG55_02435 IPR013221 Mur ligase, central CDG55_02435 IPR035911 MurE/MurF, N-terminal CDG55_02440 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CDG55_02440 IPR013221 Mur ligase, central CDG55_02440 IPR035911 MurE/MurF, N-terminal CDG55_02440 IPR000713 Mur ligase, N-terminal catalytic domain CDG55_02440 IPR036615 Mur ligase, C-terminal domain superfamily CDG55_02440 IPR004101 Mur ligase, C-terminal CDG55_02440 IPR036565 Mur-like, catalytic domain superfamily CDG55_02445 IPR000715 Glycosyl transferase, family 4 CDG55_02445 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CDG55_02445 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CDG55_02450 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted CDG55_02450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_02450 IPR025714 Methyltransferase domain CDG55_02455 IPR001460 Penicillin-binding protein, transpeptidase CDG55_02455 IPR012338 Beta-lactamase/transpeptidase-like CDG55_02455 IPR001264 Glycosyl transferase, family 51 CDG55_02455 IPR036950 Penicillin binding protein transglycosylase domain CDG55_02455 IPR031376 Penicillin-binding protein, OB-like domain CDG55_02455 IPR023346 Lysozyme-like domain superfamily CDG55_02480 IPR038591 NolW-like superfamily CDG55_02480 IPR005644 NolW-like CDG55_02480 IPR001775 GspD/PilQ family CDG55_02480 IPR011662 Secretin/TonB, short N-terminal domain CDG55_02480 IPR004846 Type II/III secretion system CDG55_02480 IPR021731 AMIN domain CDG55_02480 IPR013355 Type IV pilus secretin PilQ CDG55_02480 IPR004845 Type II secretion system GspD, conserved site CDG55_02485 IPR000623 Shikimate kinase/Threonine synthase-like 1 CDG55_02485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_02485 IPR023000 Shikimate kinase, conserved site CDG55_02485 IPR031322 Shikimate kinase/gluconokinase CDG55_02490 IPR030960 3-dehydroquinate synthase domain CDG55_02490 IPR016037 3-dehydroquinate synthase AroB CDG55_02490 IPR030963 3-dehydroquinate synthase family CDG55_02505 IPR029055 Nucleophile aminohydrolases, N-terminal CDG55_02505 IPR002932 Glutamate synthase domain CDG55_02505 IPR006982 Glutamate synthase, central-N CDG55_02505 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily CDG55_02505 IPR002489 Glutamate synthase, alpha subunit, C-terminal CDG55_02505 IPR017932 Glutamine amidotransferase type 2 domain CDG55_02505 IPR013785 Aldolase-type TIM barrel CDG55_02510 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_02510 IPR028261 Dihydroprymidine dehydrogenase domain II CDG55_02510 IPR023753 FAD/NAD(P)-binding domain CDG55_02510 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 CDG55_02510 IPR009051 Alpha-helical ferredoxin CDG55_02520 IPR007156 LemA CDG55_02520 IPR023353 LemA-like domain superfamily CDG55_02525 IPR007621 TPM domain CDG55_02535 IPR001082 Fimbrial protein pilin CDG55_02535 IPR012902 Prokaryotic N-terminal methylation site CDG55_02545 IPR001173 Glycosyltransferase 2-like CDG55_02545 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase CDG55_02545 IPR029044 Nucleotide-diphospho-sugar transferases CDG55_02550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_02550 IPR003439 ABC transporter-like CDG55_02550 IPR036640 ABC transporter type 1, transmembrane domain superfamily CDG55_02550 IPR011527 ABC transporter type 1, transmembrane domain CDG55_02550 IPR003593 AAA+ ATPase domain CDG55_02550 IPR017871 ABC transporter, conserved site CDG55_02550 IPR039421 Type I protein exporter CDG55_02555 IPR036291 NAD(P)-binding domain superfamily CDG55_02555 IPR016040 NAD(P)-binding domain CDG55_02555 IPR005888 dTDP-glucose 4,6-dehydratase CDG55_02560 IPR005835 Nucleotidyl transferase domain CDG55_02560 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CDG55_02560 IPR029044 Nucleotide-diphospho-sugar transferases CDG55_02565 IPR008894 WxcM-like, C-terminal CDG55_02565 IPR011051 RmlC-like cupin domain superfamily CDG55_02565 IPR014710 RmlC-like jelly roll fold CDG55_02580 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_02580 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDG55_02580 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDG55_02580 IPR036291 NAD(P)-binding domain superfamily CDG55_02585 IPR020459 AMP-binding CDG55_02585 IPR042099 AMP-dependent synthetase-like superfamily CDG55_02585 IPR000873 AMP-dependent synthetase/ligase CDG55_02585 IPR020845 AMP-binding, conserved site CDG55_02585 IPR025110 AMP-binding enzyme, C-terminal domain CDG55_02600 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDG55_02600 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_02600 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_02600 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_02610 IPR029044 Nucleotide-diphospho-sugar transferases CDG55_02610 IPR001173 Glycosyltransferase 2-like CDG55_02615 IPR029044 Nucleotide-diphospho-sugar transferases CDG55_02620 IPR015899 UDP-galactopyranose mutase, C-terminal CDG55_02620 IPR004379 UDP-galactopyranose mutase CDG55_02630 IPR001296 Glycosyl transferase, family 1 CDG55_02640 IPR012902 Prokaryotic N-terminal methylation site CDG55_02640 IPR001082 Fimbrial protein pilin CDG55_02650 IPR031726 Protein glycosylation ligase domain CDG55_02650 IPR021797 Virulence factor membrane-bound polymerase, C-terminal CDG55_02650 IPR007016 O-antigen ligase-related CDG55_02655 IPR012347 Ferritin-like CDG55_02655 IPR009040 Ferritin-like diiron domain CDG55_02655 IPR009078 Ferritin-like superfamily CDG55_02655 IPR008331 Ferritin/DPS protein domain CDG55_02655 IPR002024 Bacterioferritin CDG55_02660 IPR007419 BFD-like [2Fe-2S]-binding domain CDG55_02660 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CDG55_02665 IPR019897 RidA, conserved site CDG55_02665 IPR035959 RutC-like superfamily CDG55_02665 IPR006175 YjgF/YER057c/UK114 family CDG55_02665 IPR006056 RidA family CDG55_02670 IPR012676 TGS-like CDG55_02670 IPR004095 TGS CDG55_02670 IPR033655 RelA, TGS domain CDG55_02670 IPR004811 RelA/SpoT family CDG55_02670 IPR003607 HD/PDEase domain CDG55_02670 IPR012675 Beta-grasp domain superfamily CDG55_02670 IPR002912 ACT domain CDG55_02670 IPR007685 RelA/SpoT CDG55_02675 IPR006110 RNA polymerase, subunit omega/K/RPB6 CDG55_02675 IPR012293 RNA polymerase subunit, RPB6/omega CDG55_02675 IPR036161 RPB6/omega subunit-like superfamily CDG55_02675 IPR003716 DNA-directed RNA polymerase, omega subunit CDG55_02680 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_02680 IPR020590 Guanylate kinase, conserved site CDG55_02680 IPR017665 Guanylate kinase CDG55_02680 IPR008144 Guanylate kinase-like domain CDG55_02680 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CDG55_02685 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CDG55_02710 IPR008707 PilC beta-propeller domain CDG55_02710 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDG55_02725 IPR023803 Ribosomal protein S16 domain superfamily CDG55_02725 IPR000307 Ribosomal protein S16 CDG55_02725 IPR020592 Ribosomal protein S16, conserved site CDG55_02730 IPR011033 PRC-barrel-like superfamily CDG55_02730 IPR011961 16S rRNA processing protein RimM CDG55_02730 IPR027275 PRC-barrel domain CDG55_02730 IPR002676 RimM, N-terminal CDG55_02730 IPR036976 RimM, N-terminal domain superfamily CDG55_02730 IPR009000 Translation protein, beta-barrel domain superfamily CDG55_02735 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CDG55_02735 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CDG55_02735 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG55_02735 IPR029028 Alpha/beta knot methyltransferases CDG55_02735 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CDG55_02740 IPR038657 Ribosomal protein L19 superfamily CDG55_02740 IPR001857 Ribosomal protein L19 CDG55_02740 IPR018257 Ribosomal protein L19, conserved site CDG55_02740 IPR008991 Translation protein SH3-like domain superfamily CDG55_02745 IPR029058 Alpha/Beta hydrolase fold CDG55_02745 IPR000073 Alpha/beta hydrolase fold-1 CDG55_02750 IPR004961 Lipase chaperone CDG55_02755 IPR032819 tRNA pseudouridylate synthase B, C-terminal CDG55_02755 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal CDG55_02755 IPR014780 tRNA pseudouridine synthase II, TruB CDG55_02755 IPR002501 Pseudouridine synthase II, N-terminal CDG55_02755 IPR015947 PUA-like superfamily CDG55_02755 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDG55_02760 IPR002781 Transmembrane protein TauE-like CDG55_02770 IPR000620 EamA domain CDG55_02775 IPR000620 EamA domain CDG55_02780 IPR036291 NAD(P)-binding domain superfamily CDG55_02780 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDG55_02780 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDG55_02780 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDG55_02780 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDG55_02780 IPR002912 ACT domain CDG55_02790 IPR036318 FAD-binding, type PCMH-like superfamily CDG55_02790 IPR016164 FAD-linked oxidase-like, C-terminal CDG55_02790 IPR004113 FAD-linked oxidase, C-terminal CDG55_02790 IPR004490 Glycolate oxidase subunit GlcD CDG55_02790 IPR006094 FAD linked oxidase, N-terminal CDG55_02790 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDG55_02790 IPR016166 FAD-binding domain, PCMH-type CDG55_02805 IPR007138 Antibiotic biosynthesis monooxygenase domain CDG55_02805 IPR011008 Dimeric alpha-beta barrel CDG55_02810 IPR029039 Flavoprotein-like superfamily CDG55_02810 IPR003680 Flavodoxin-like fold CDG55_02825 IPR036259 MFS transporter superfamily CDG55_02825 IPR020846 Major facilitator superfamily domain CDG55_02825 IPR011701 Major facilitator superfamily CDG55_02825 IPR005829 Sugar transporter, conserved site CDG55_02830 IPR018152 Superoxide dismutase, copper/zinc, binding site CDG55_02830 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone CDG55_02830 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily CDG55_02830 IPR001424 Superoxide dismutase, copper/zinc binding domain CDG55_02835 IPR002549 Transmembrane protein TqsA-like CDG55_02845 IPR025669 AAA domain CDG55_02845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_02855 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_02855 IPR004033 UbiE/COQ5 methyltransferase CDG55_02855 IPR023576 UbiE/COQ5 methyltransferase, conserved site CDG55_02870 IPR013216 Methyltransferase type 11 CDG55_02870 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_02900 IPR008909 DALR anticodon binding CDG55_02900 IPR015944 Glycine-tRNA ligase, beta subunit CDG55_02900 IPR006194 Glycine-tRNA synthetase, heterodimeric CDG55_02910 IPR002310 Glycine-tRNA ligase, alpha subunit CDG55_02910 IPR006194 Glycine-tRNA synthetase, heterodimeric CDG55_02930 IPR000644 CBS domain CDG55_02935 IPR007168 Phage shock protein, PspC, N-terminal CDG55_02945 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDG55_02945 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDG55_02945 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDG55_02945 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDG55_02945 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDG55_02945 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDG55_02945 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDG55_02955 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CDG55_02955 IPR036291 NAD(P)-binding domain superfamily CDG55_02955 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CDG55_02955 IPR022893 Shikimate dehydrogenase family CDG55_02955 IPR041121 SDH, C-terminal CDG55_02955 IPR011342 Shikimate dehydrogenase CDG55_02965 IPR007197 Radical SAM CDG55_02965 IPR010723 HemN, C-terminal CDG55_02965 IPR006638 Elp3/MiaB/NifB CDG55_02965 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN CDG55_02965 IPR023404 Radical SAM, alpha/beta horseshoe CDG55_02965 IPR034505 Anaerobic coproporphyrinogen-III oxidase CDG55_02970 IPR036144 RibA-like superfamily CDG55_02970 IPR032677 GTP cyclohydrolase II CDG55_02970 IPR000926 GTP cyclohydrolase II, RibA CDG55_02975 IPR033248 Transketolase, C-terminal domain CDG55_02975 IPR020826 Transketolase binding site CDG55_02975 IPR005475 Transketolase-like, pyrimidine-binding domain CDG55_02975 IPR029061 Thiamin diphosphate-binding fold CDG55_02975 IPR005477 Deoxyxylulose-5-phosphate synthase CDG55_02975 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CDG55_02980 IPR033942 Inositol monophosphatase CDG55_02980 IPR020583 Inositol monophosphatase, metal-binding site CDG55_02980 IPR022337 Inositol monophosphatase, SuhB CDG55_02980 IPR020550 Inositol monophosphatase, conserved site CDG55_02980 IPR000760 Inositol monophosphatase-like CDG55_02985 IPR021046 Cold-shock protein, DEAD box A, C-terminal CDG55_02985 IPR034415 CsdA, RNA recognition motif CDG55_02985 IPR011545 DEAD/DEAH box helicase domain CDG55_02985 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CDG55_02985 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG55_02985 IPR001650 Helicase, C-terminal CDG55_02985 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CDG55_02985 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_02985 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDG55_02985 IPR014014 RNA helicase, DEAD-box type, Q motif CDG55_02985 IPR028618 ATP-dependent RNA helicase DeaD CDG55_02995 IPR003593 AAA+ ATPase domain CDG55_02995 IPR003439 ABC transporter-like CDG55_02995 IPR017871 ABC transporter, conserved site CDG55_02995 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_02995 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl CDG55_03000 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CDG55_03000 IPR030802 ABC transporter permease MalE CDG55_03005 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD CDG55_03005 IPR003399 Mce/MlaD CDG55_03010 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CDG55_03010 IPR042245 Tgt2/MlaC superfamily CDG55_03020 IPR004488 Magnesium/cobalt transport protein CorA CDG55_03020 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CDG55_03030 IPR000836 Phosphoribosyltransferase domain CDG55_03030 IPR005222 Competence protein ComF CDG55_03030 IPR029057 Phosphoribosyltransferase-like CDG55_03035 IPR004609 ATP-dependent DNA helicase RecG CDG55_03035 IPR011545 DEAD/DEAH box helicase domain CDG55_03035 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG55_03035 IPR001650 Helicase, C-terminal CDG55_03035 IPR012340 Nucleic acid-binding, OB-fold CDG55_03035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_03035 IPR033454 RecG, wedge domain CDG55_03050 IPR038404 TRAP transporter solute receptor DctP superfamily CDG55_03055 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB CDG55_03055 IPR002123 Phospholipid/glycerol acyltransferase CDG55_03055 IPR041728 GPAT/DHAPAT, acyltransferase domain CDG55_03055 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase CDG55_03060 IPR003703 Acyl-CoA thioesterase CDG55_03060 IPR029069 HotDog domain superfamily CDG55_03065 IPR036458 Sodium:dicarboxylate symporter superfamily CDG55_03065 IPR018107 Sodium:dicarboxylate symporter, conserved site CDG55_03065 IPR034703 Proton/glutamate-aspartate symporter GltP CDG55_03065 IPR033380 Glutamate-aspartate symport protein GltP/GltT CDG55_03065 IPR001991 Sodium:dicarboxylate symporter CDG55_03075 IPR030393 EngB-type guanine nucleotide-binding (G) domain CDG55_03075 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CDG55_03075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_03075 IPR006073 GTP binding domain CDG55_03080 IPR036390 Winged helix DNA-binding domain superfamily CDG55_03080 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_03080 IPR000944 Transcription regulator Rrf2-type CDG55_03080 IPR030489 Transcription regulator Rrf2-type, conserved site CDG55_03085 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG55_03085 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDG55_03085 IPR017938 Riboflavin synthase-like beta-barrel CDG55_03085 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDG55_03085 IPR023950 Flavohemoprotein CDG55_03085 IPR012292 Globin/Protoglobin CDG55_03085 IPR009050 Globin-like superfamily CDG55_03085 IPR000971 Globin CDG55_03085 IPR017927 FAD-binding domain, ferredoxin reductase-type CDG55_03090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_03090 IPR033186 Helicase HerA-like C-terminal CDG55_03095 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_03095 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_03095 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_03095 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CDG55_03100 IPR029062 Class I glutamine amidotransferase-like CDG55_03100 IPR017926 Glutamine amidotransferase CDG55_03105 IPR001848 Ribosomal protein S10 CDG55_03105 IPR036838 Ribosomal protein S10 domain superfamily CDG55_03105 IPR027486 Ribosomal protein S10 domain CDG55_03105 IPR018268 Ribosomal protein S10, conserved site CDG55_03110 IPR019926 Ribosomal protein L3, conserved site CDG55_03110 IPR019927 Ribosomal protein L3, bacterial/organelle-type CDG55_03110 IPR000597 Ribosomal protein L3 CDG55_03110 IPR009000 Translation protein, beta-barrel domain superfamily CDG55_03115 IPR013005 50S ribosomal protein uL4 CDG55_03115 IPR002136 Ribosomal protein L4/L1e CDG55_03115 IPR023574 Ribosomal protein L4 domain superfamily CDG55_03120 IPR013025 Ribosomal protein L25/L23 CDG55_03120 IPR012678 Ribosomal protein L23/L15e core domain superfamily CDG55_03120 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CDG55_03125 IPR022669 Ribosomal protein L2, C-terminal CDG55_03125 IPR014726 Ribosomal protein L2, domain 3 CDG55_03125 IPR008991 Translation protein SH3-like domain superfamily CDG55_03125 IPR012340 Nucleic acid-binding, OB-fold CDG55_03125 IPR022666 Ribosomal Proteins L2, RNA binding domain CDG55_03125 IPR014722 Ribosomal protein L2, domain 2 CDG55_03125 IPR002171 Ribosomal protein L2 CDG55_03125 IPR005880 Ribosomal protein L2, bacterial/organellar-type CDG55_03130 IPR002222 Ribosomal protein S19/S15 CDG55_03130 IPR005732 Ribosomal protein S19, bacterial-type CDG55_03130 IPR023575 Ribosomal protein S19, superfamily CDG55_03130 IPR020934 Ribosomal protein S19 conserved site CDG55_03135 IPR018260 Ribosomal protein L22/L17, conserved site CDG55_03135 IPR001063 Ribosomal protein L22/L17 CDG55_03135 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CDG55_03135 IPR036394 Ribosomal protein L22/L17 superfamily CDG55_03140 IPR001351 Ribosomal protein S3, C-terminal CDG55_03140 IPR036419 Ribosomal protein S3, C-terminal domain superfamily CDG55_03140 IPR018280 Ribosomal protein S3, conserved site CDG55_03140 IPR015946 K homology domain-like, alpha/beta CDG55_03140 IPR004044 K Homology domain, type 2 CDG55_03140 IPR009019 K homology domain superfamily, prokaryotic type CDG55_03140 IPR004087 K Homology domain CDG55_03140 IPR005704 Ribosomal protein S3, bacterial-type CDG55_03145 IPR000114 Ribosomal protein L16 CDG55_03145 IPR020798 Ribosomal protein L16, conserved site CDG55_03145 IPR036920 Ribosomal protein L10e/L16 superfamily CDG55_03145 IPR016180 Ribosomal protein L10e/L16 CDG55_03150 IPR001854 Ribosomal protein L29/L35 CDG55_03150 IPR036049 Ribosomal protein L29/L35 superfamily CDG55_03155 IPR019984 30S ribosomal protein S17 CDG55_03155 IPR000266 Ribosomal protein S17/S11 CDG55_03155 IPR019979 Ribosomal protein S17, conserved site CDG55_03155 IPR012340 Nucleic acid-binding, OB-fold CDG55_03160 IPR036853 Ribosomal protein L14 superfamily CDG55_03160 IPR000218 Ribosomal protein L14P CDG55_03160 IPR005745 Ribosomal protein L14P, bacterial-type CDG55_03160 IPR019972 Ribosomal protein L14P, conserved site CDG55_03165 IPR005824 KOW CDG55_03165 IPR008991 Translation protein SH3-like domain superfamily CDG55_03165 IPR041988 Ribosomal Protein L26/L24, KOW domain CDG55_03165 IPR014722 Ribosomal protein L2, domain 2 CDG55_03165 IPR003256 Ribosomal protein L24 CDG55_03165 IPR005825 Ribosomal protein L24/L26, conserved site CDG55_03170 IPR002132 Ribosomal protein L5 CDG55_03170 IPR031310 Ribosomal protein L5, N-terminal CDG55_03170 IPR022803 Ribosomal protein L5 domain superfamily CDG55_03170 IPR020929 Ribosomal protein L5, conserved site CDG55_03170 IPR031309 Ribosomal protein L5, C-terminal CDG55_03170 IPR020930 Ribosomal protein L5, bacterial-type CDG55_03175 IPR001209 Ribosomal protein S14 CDG55_03175 IPR023036 Ribosomal protein S14, bacterial/plastid CDG55_03175 IPR018271 Ribosomal protein S14, conserved site CDG55_03180 IPR000630 Ribosomal protein S8 CDG55_03180 IPR035987 Ribosomal protein S8 superfamily CDG55_03185 IPR000702 Ribosomal protein L6 CDG55_03185 IPR002358 Ribosomal protein L6, conserved site CDG55_03185 IPR020040 Ribosomal protein L6, alpha-beta domain CDG55_03185 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily CDG55_03185 IPR019906 Ribosomal protein L6, bacterial-type CDG55_03190 IPR004389 Ribosomal protein L18, bacterial-type CDG55_03190 IPR005484 Ribosomal protein L18 CDG55_03195 IPR018192 Ribosomal protein S5, N-terminal, conserved site CDG55_03195 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_03195 IPR005324 Ribosomal protein S5, C-terminal CDG55_03195 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG55_03195 IPR000851 Ribosomal protein S5 CDG55_03195 IPR013810 Ribosomal protein S5, N-terminal CDG55_03195 IPR005712 Ribosomal protein S5, bacterial-type CDG55_03200 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CDG55_03200 IPR005996 Ribosomal protein L30, bacterial-type CDG55_03200 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CDG55_03205 IPR036227 Ribosomal L18e/L15P superfamily CDG55_03205 IPR021131 Ribosomal protein L18e/L15P CDG55_03205 IPR030878 Ribosomal protein L15 CDG55_03205 IPR005749 Ribosomal protein L15, bacterial-type CDG55_03205 IPR001196 Ribosomal protein L15, conserved site CDG55_03210 IPR030659 SecY conserved site CDG55_03210 IPR002208 SecY/SEC61-alpha family CDG55_03210 IPR023201 SecY domain superfamily CDG55_03210 IPR026593 Protein translocase subunit SecY CDG55_03215 IPR000473 Ribosomal protein L36 CDG55_03215 IPR035977 Ribosomal protein L36 superfamily CDG55_03220 IPR027437 30s ribosomal protein S13, C-terminal CDG55_03220 IPR001892 Ribosomal protein S13 CDG55_03220 IPR010979 Ribosomal protein S13-like, H2TH CDG55_03220 IPR019980 Ribosomal protein S13, bacterial-type CDG55_03220 IPR018269 Ribosomal protein S13, conserved site CDG55_03225 IPR001971 Ribosomal protein S11 CDG55_03225 IPR036967 Ribosomal protein S11 superfamily CDG55_03225 IPR018102 Ribosomal S11, conserved site CDG55_03225 IPR019981 Ribosomal protein S11, bacterial-type CDG55_03230 IPR022801 Ribosomal protein S4/S9 CDG55_03230 IPR005709 Ribosomal protein S4, bacterial-type CDG55_03230 IPR018079 Ribosomal protein S4, conserved site CDG55_03230 IPR002942 RNA-binding S4 domain CDG55_03230 IPR001912 Ribosomal protein S4/S9, N-terminal CDG55_03230 IPR036986 RNA-binding S4 domain superfamily CDG55_03235 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CDG55_03235 IPR011773 DNA-directed RNA polymerase, alpha subunit CDG55_03235 IPR036643 DNA-directed RNA polymerase, insert domain superfamily CDG55_03235 IPR011262 DNA-directed RNA polymerase, insert domain CDG55_03235 IPR011260 RNA polymerase, alpha subunit, C-terminal CDG55_03235 IPR036603 RNA polymerase, RBP11-like subunit CDG55_03240 IPR036373 Ribosomal protein L17 superfamily CDG55_03240 IPR000456 Ribosomal protein L17 CDG55_03250 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_03250 IPR020946 Flavin monooxygenase-like CDG55_03260 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDG55_03260 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDG55_03260 IPR006089 Acyl-CoA dehydrogenase, conserved site CDG55_03260 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDG55_03260 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDG55_03260 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDG55_03260 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDG55_03265 IPR005631 Flavinator of succinate dehydrogenase CDG55_03265 IPR036714 Flavinator of succinate dehydrogenase superfamily CDG55_03305 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CDG55_03305 IPR001567 Peptidase M3A/M3B catalytic domain CDG55_03310 IPR040476 RNase II/RNase R, cold shock domain CDG55_03310 IPR003029 S1 domain CDG55_03310 IPR022967 RNA-binding domain, S1 CDG55_03310 IPR013668 Ribonuclease R winged-helix domain CDG55_03310 IPR011805 Ribonuclease R CDG55_03310 IPR004476 Ribonuclease II/ribonuclease R CDG55_03310 IPR001900 Ribonuclease II/R CDG55_03310 IPR013223 Ribonuclease B, N-terminal OB domain CDG55_03310 IPR012340 Nucleic acid-binding, OB-fold CDG55_03310 IPR022966 Ribonuclease II/R, conserved site CDG55_03310 IPR011129 Cold shock domain CDG55_03345 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CDG55_03345 IPR011234 Fumarylacetoacetase-like, C-terminal CDG55_03350 IPR023679 Uncharacterised protein family UPF0761, bacterial CDG55_03350 IPR017039 Virulence factor BrkB CDG55_03355 IPR008254 Flavodoxin/nitric oxide synthase CDG55_03355 IPR001226 Flavodoxin, conserved site CDG55_03355 IPR029039 Flavoprotein-like superfamily CDG55_03355 IPR010089 Flavoprotein WrbA-like CDG55_03355 IPR005025 NADPH-dependent FMN reductase-like CDG55_03360 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt CDG55_03375 IPR002033 Sec-independent periplasmic protein translocase TatC CDG55_03375 IPR019820 Sec-independent periplasmic protein translocase, conserved site CDG55_03380 IPR003369 Sec-independent protein translocase protein TatA/B/E CDG55_03380 IPR018448 Twin-arginine translocation protein TatB CDG55_03385 IPR006312 Sec-independent protein translocase protein TatA/E CDG55_03385 IPR003369 Sec-independent protein translocase protein TatA/B/E CDG55_03390 IPR029001 Inosine triphosphate pyrophosphatase-like CDG55_03390 IPR020922 dITP/XTP pyrophosphatase CDG55_03390 IPR002637 Ham1-like protein CDG55_03405 IPR010743 Methionine biosynthesis MetW CDG55_03405 IPR008220 Homoserine/serine acetyltransferase MetX-like CDG55_03405 IPR000073 Alpha/beta hydrolase fold-1 CDG55_03405 IPR029058 Alpha/Beta hydrolase fold CDG55_03405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_03410 IPR000073 Alpha/beta hydrolase fold-1 CDG55_03410 IPR029058 Alpha/Beta hydrolase fold CDG55_03410 IPR008220 Homoserine/serine acetyltransferase MetX-like CDG55_03415 IPR039371 LeuA, N-terminal catalytic TIM barrel domain CDG55_03415 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CDG55_03415 IPR013785 Aldolase-type TIM barrel CDG55_03415 IPR005668 2-isopropylmalate synthase CDG55_03415 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CDG55_03415 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CDG55_03415 IPR000891 Pyruvate carboxyltransferase CDG55_03420 IPR023550 PKHD-type hydroxylase CDG55_03420 IPR041097 PKHD-type hydroxylase C-terminal domain CDG55_03420 IPR005123 Oxoglutarate/iron-dependent dioxygenase CDG55_03420 IPR006620 Prolyl 4-hydroxylase, alpha subunit CDG55_03425 IPR010105 TonB-dependent siderophore receptor CDG55_03425 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG55_03425 IPR000531 TonB-dependent receptor-like, beta-barrel CDG55_03425 IPR039423 TonB-dependent receptor-like CDG55_03425 IPR030148 Catecholate siderophore receptor Fiu CDG55_03425 IPR037066 TonB-dependent receptor, plug domain superfamily CDG55_03425 IPR012910 TonB-dependent receptor, plug domain CDG55_03430 IPR008881 Trigger factor, ribosome-binding, bacterial CDG55_03430 IPR005215 Trigger factor CDG55_03430 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG55_03430 IPR036611 Trigger factor ribosome-binding domain superfamily CDG55_03430 IPR027304 Trigger factor/SurA domain superfamily CDG55_03430 IPR037041 Trigger factor, C-terminal domain superfamily CDG55_03430 IPR008880 Trigger factor, C-terminal CDG55_03435 IPR001907 ATP-dependent Clp protease proteolytic subunit CDG55_03435 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CDG55_03435 IPR033135 ClpP, histidine active site CDG55_03435 IPR029045 ClpP/crotonase-like domain superfamily CDG55_03435 IPR018215 ClpP, Ser active site CDG55_03440 IPR010603 Zinc finger, ClpX C4-type CDG55_03440 IPR003959 ATPase, AAA-type, core CDG55_03440 IPR019489 Clp ATPase, C-terminal CDG55_03440 IPR004487 Clp protease, ATP-binding subunit ClpX CDG55_03440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_03440 IPR003593 AAA+ ATPase domain CDG55_03440 IPR038366 Zinc finger, ClpX C4-type superfamily CDG55_03455 IPR020557 Fumarate lyase, conserved site CDG55_03455 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily CDG55_03455 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain CDG55_03455 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain CDG55_03455 IPR011167 Iron-dependent fumarate hydratase CDG55_03460 IPR042113 Phosphate acetyltransferase, domain 1 CDG55_03460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_03460 IPR016475 Phosphate acetyltransferase, bacteria CDG55_03460 IPR010766 DRTGG CDG55_03460 IPR004614 Phosphate acetyltransferase CDG55_03460 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CDG55_03460 IPR002505 Phosphate acetyl/butaryl transferase CDG55_03460 IPR042112 Phosphate acetyltransferase, domain 2 CDG55_03465 IPR000890 Aliphatic acid kinase, short-chain CDG55_03465 IPR023865 Aliphatic acid kinase, short-chain, conserved site CDG55_03465 IPR004372 Acetate/propionate kinase CDG55_03470 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site CDG55_03470 IPR016161 Aldehyde/histidinol dehydrogenase CDG55_03470 IPR000965 GPR domain CDG55_03470 IPR012134 Glutamate-5-semialdehyde dehydrogenase CDG55_03470 IPR016163 Aldehyde dehydrogenase, C-terminal CDG55_03470 IPR016162 Aldehyde dehydrogenase, N-terminal CDG55_03470 IPR015590 Aldehyde dehydrogenase domain CDG55_03475 IPR029058 Alpha/Beta hydrolase fold CDG55_03475 IPR000073 Alpha/beta hydrolase fold-1 CDG55_03475 IPR000639 Epoxide hydrolase-like CDG55_03485 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CDG55_03485 IPR017853 Glycoside hydrolase superfamily CDG55_03485 IPR019800 Glycoside hydrolase, family 3, active site CDG55_03485 IPR022956 Beta-hexosaminidase, bacterial CDG55_03485 IPR001764 Glycoside hydrolase, family 3, N-terminal CDG55_03490 IPR005151 Tail specific protease CDG55_03490 IPR004447 C-terminal-processing peptidase S41A CDG55_03490 IPR029045 ClpP/crotonase-like domain superfamily CDG55_03490 IPR020992 Tail specific protease, C-terminal CDG55_03490 IPR036034 PDZ superfamily CDG55_03490 IPR040573 Tail specific protease, N-terminal domain CDG55_03490 IPR001478 PDZ domain CDG55_03515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_03515 IPR042108 GTPase HflX, N-terminal domain superfamily CDG55_03515 IPR006073 GTP binding domain CDG55_03515 IPR032305 GTP-binding protein, middle domain CDG55_03515 IPR035647 EF-G domain III/V-like CDG55_03515 IPR025121 GTPase HflX, N-terminal CDG55_03515 IPR016496 GTPase HflX CDG55_03515 IPR030394 HflX-type guanine nucleotide-binding (G) domain CDG55_03525 IPR001736 Phospholipase D/Transphosphatidylase CDG55_03525 IPR025202 Phospholipase D-like domain CDG55_03525 IPR030871 Cardiolipin synthase C CDG55_03530 IPR006311 Twin-arginine translocation pathway, signal sequence CDG55_03530 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CDG55_03530 IPR029052 Metallo-dependent phosphatase-like CDG55_03530 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDG55_03535 IPR006664 Outer membrane protein, bacterial CDG55_03535 IPR006665 OmpA-like domain CDG55_03535 IPR000498 Outer membrane protein OmpA-like, transmembrane domain CDG55_03535 IPR036737 OmpA-like domain superfamily CDG55_03535 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG55_03535 IPR002368 Outer membrane protein, OmpA CDG55_03535 IPR006690 Outer membrane protein, OmpA-like, conserved site CDG55_03540 IPR029787 Nucleotide cyclase CDG55_03540 IPR003660 HAMP domain CDG55_03540 IPR000160 GGDEF domain CDG55_03540 IPR033417 Periplasmic sensor domain CHASE8 CDG55_03580 IPR029021 Protein-tyrosine phosphatase-like CDG55_03580 IPR001279 Metallo-beta-lactamase CDG55_03580 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG55_03580 IPR005939 Beta-lactamase hydrolase-like CDG55_03585 IPR000073 Alpha/beta hydrolase fold-1 CDG55_03585 IPR029058 Alpha/Beta hydrolase fold CDG55_03590 IPR005746 Thioredoxin CDG55_03590 IPR036249 Thioredoxin-like superfamily CDG55_03590 IPR017937 Thioredoxin, conserved site CDG55_03590 IPR013766 Thioredoxin domain CDG55_03595 IPR029069 HotDog domain superfamily CDG55_03595 IPR006683 Thioesterase domain CDG55_03595 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase CDG55_03595 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain CDG55_03605 IPR007551 Protein of unknown function DUF520 CDG55_03605 IPR035570 UPF0234, N-terminal CDG55_03605 IPR035571 UPF0234-like, C-terminal CDG55_03605 IPR036183 YajQ-like superfamily CDG55_03615 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal CDG55_03615 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_03615 IPR006076 FAD dependent oxidoreductase CDG55_03615 IPR008471 MnmC-like methyltransferase CDG55_03615 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC CDG55_03630 IPR006008 Intracellular septation protein A CDG55_03640 IPR021134 Bestrophin/UPF0187 CDG55_03645 IPR001405 Uncharacterised protein family UPF0758 CDG55_03645 IPR037518 MPN domain CDG55_03645 IPR010994 RuvA domain 2-like CDG55_03645 IPR025657 RadC-like JAB domain CDG55_03650 IPR003382 Flavoprotein CDG55_03650 IPR035929 CoaB-like superfamily CDG55_03650 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CDG55_03650 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CDG55_03650 IPR036551 Flavin prenyltransferase-like CDG55_03660 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CDG55_03660 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CDG55_03660 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CDG55_03660 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CDG55_03660 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_03660 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CDG55_03670 IPR035958 SecB-like superfamily CDG55_03670 IPR003708 Bacterial protein export chaperone SecB CDG55_03675 IPR011900 Glutaredoxin, GrxC CDG55_03675 IPR036249 Thioredoxin-like superfamily CDG55_03675 IPR014025 Glutaredoxin subgroup CDG55_03675 IPR002109 Glutaredoxin CDG55_03675 IPR011767 Glutaredoxin active site CDG55_03685 IPR012340 Nucleic acid-binding, OB-fold CDG55_03685 IPR004881 Ribosome biogenesis GTPase RsgA CDG55_03685 IPR010914 RsgA GTPase domain CDG55_03685 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CDG55_03685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_03690 IPR022894 Oligoribonuclease CDG55_03690 IPR036397 Ribonuclease H superfamily CDG55_03690 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG55_03690 IPR012337 Ribonuclease H-like superfamily CDG55_03695 IPR011701 Major facilitator superfamily CDG55_03695 IPR020846 Major facilitator superfamily domain CDG55_03695 IPR036259 MFS transporter superfamily CDG55_03715 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CDG55_03715 IPR036291 NAD(P)-binding domain superfamily CDG55_03715 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CDG55_03715 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CDG55_03715 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CDG55_03720 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CDG55_03725 IPR034300 NADP transhydrogenase beta-like domain CDG55_03725 IPR012136 NADP transhydrogenase, beta subunit CDG55_03725 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDG55_03730 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_03730 IPR005979 Light-dependent protochlorophyllide reductase CDG55_03730 IPR036291 NAD(P)-binding domain superfamily CDG55_03735 IPR029020 Ammonium/urea transporter CDG55_03735 IPR001905 Ammonium transporter CDG55_03735 IPR024041 Ammonium transporter AmtB-like domain CDG55_03735 IPR003660 HAMP domain CDG55_03735 IPR018047 Ammonium transporter, conserved site CDG55_03745 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CDG55_03750 IPR017643 Hydroxypyruvate isomerase CDG55_03750 IPR026040 Hydroxypyruvate isomerase-like CDG55_03750 IPR013022 Xylose isomerase-like, TIM barrel domain CDG55_03750 IPR036237 Xylose isomerase-like superfamily CDG55_03755 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CDG55_03755 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDG55_03755 IPR036291 NAD(P)-binding domain superfamily CDG55_03755 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CDG55_03755 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CDG55_03755 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CDG55_03755 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CDG55_03755 IPR006398 2-hydroxy-3-oxopropionate reductase CDG55_03760 IPR029045 ClpP/crotonase-like domain superfamily CDG55_03760 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDG55_03760 IPR001753 Enoyl-CoA hydratase/isomerase CDG55_03765 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDG55_03765 IPR036641 HPT domain superfamily CDG55_03765 IPR019247 Histidine kinase BarA, N-terminal CDG55_03765 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDG55_03765 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDG55_03765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_03765 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_03765 IPR003660 HAMP domain CDG55_03765 IPR011006 CheY-like superfamily CDG55_03765 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDG55_03765 IPR005467 Histidine kinase domain CDG55_03765 IPR001789 Signal transduction response regulator, receiver domain CDG55_03770 IPR001926 Pyridoxal-phosphate dependent enzyme CDG55_03770 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CDG55_03770 IPR005858 Cysteine synthase CysM CDG55_03770 IPR005856 Cysteine synthase CDG55_03770 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG55_03780 IPR010280 (Uracil-5)-methyltransferase family CDG55_03780 IPR030390 RNA methyltransferase TrmA, active site CDG55_03780 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD CDG55_03780 IPR012340 Nucleic acid-binding, OB-fold CDG55_03780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_03780 IPR002792 TRAM domain CDG55_03785 IPR004811 RelA/SpoT family CDG55_03785 IPR007685 RelA/SpoT CDG55_03785 IPR004095 TGS CDG55_03785 IPR012676 TGS-like CDG55_03785 IPR033655 RelA, TGS domain CDG55_03785 IPR003607 HD/PDEase domain CDG55_03785 IPR002912 ACT domain CDG55_03785 IPR012675 Beta-grasp domain superfamily CDG55_03810 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_03810 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDG55_03810 IPR036291 NAD(P)-binding domain superfamily CDG55_03815 IPR011551 NTP pyrophosphohydrolase MazG CDG55_03815 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CDG55_03820 IPR010994 RuvA domain 2-like CDG55_03820 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CDG55_03820 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CDG55_03825 IPR002646 Poly A polymerase, head domain CDG55_03825 IPR025866 Polymerase A arginine-rich C-terminal domain CDG55_03825 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CDG55_03825 IPR010206 Poly(A) polymerase I CDG55_03830 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CDG55_03830 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily CDG55_03835 IPR003700 Ketopantoate hydroxymethyltransferase CDG55_03835 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CDG55_03835 IPR040442 Pyruvate kinase-like domain superfamily CDG55_03840 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain CDG55_03840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_03840 IPR004821 Cytidyltransferase-like domain CDG55_03840 IPR003721 Pantoate-beta-alanine ligase CDG55_03845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_03845 IPR005337 RapZ-like family CDG55_03850 IPR000032 Phosphocarrier protein HPr-like CDG55_03850 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CDG55_03850 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CDG55_03850 IPR035895 HPr-like superfamily CDG55_03855 IPR006839 Ribosome-associated, YjgA CDG55_03855 IPR023153 PSPTO4464-like domain superfamily CDG55_03860 IPR000873 AMP-dependent synthetase/ligase CDG55_03860 IPR042099 AMP-dependent synthetase-like superfamily CDG55_03860 IPR025110 AMP-binding enzyme, C-terminal domain CDG55_03860 IPR020845 AMP-binding, conserved site CDG55_03865 IPR012675 Beta-grasp domain superfamily CDG55_03865 IPR004095 TGS CDG55_03865 IPR012676 TGS-like CDG55_03865 IPR036621 Anticodon-binding domain superfamily CDG55_03865 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CDG55_03865 IPR033728 Threonine-tRNA ligase catalytic core domain CDG55_03865 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CDG55_03865 IPR004154 Anticodon-binding CDG55_03865 IPR006195 Aminoacyl-tRNA synthetase, class II CDG55_03865 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CDG55_03865 IPR002320 Threonine-tRNA ligase, class IIa CDG55_03870 IPR019814 Translation initiation factor 3, N-terminal CDG55_03870 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily CDG55_03870 IPR001288 Translation initiation factor 3 CDG55_03870 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily CDG55_03870 IPR019815 Translation initiation factor 3, C-terminal CDG55_03875 IPR008978 HSP20-like chaperone CDG55_03875 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain CDG55_03875 IPR002068 Alpha crystallin/Hsp20 domain CDG55_03880 IPR010987 Glutathione S-transferase, C-terminal-like CDG55_03880 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG55_03880 IPR004046 Glutathione S-transferase, C-terminal CDG55_03880 IPR036249 Thioredoxin-like superfamily CDG55_03880 IPR004045 Glutathione S-transferase, N-terminal CDG55_03885 IPR032816 SNARE associated Golgi protein CDG55_03895 IPR018265 Ribosomal protein L35, conserved site CDG55_03895 IPR021137 Ribosomal protein L35 CDG55_03895 IPR037229 Ribosomal protein L35 superfamily CDG55_03895 IPR001706 Ribosomal protein L35, non-mitochondrial CDG55_03900 IPR035566 Ribosomal protein L20, C-terminal CDG55_03900 IPR005813 Ribosomal protein L20 CDG55_03915 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CDG55_03915 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CDG55_03915 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CDG55_03915 IPR006195 Aminoacyl-tRNA synthetase, class II CDG55_03915 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CDG55_03915 IPR002319 Phenylalanyl-tRNA synthetase CDG55_03920 IPR009061 Putative DNA-binding domain superfamily CDG55_03920 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CDG55_03920 IPR005147 tRNA synthetase, B5-domain CDG55_03920 IPR002547 tRNA-binding domain CDG55_03920 IPR005146 B3/B4 tRNA-binding domain CDG55_03920 IPR005121 Ferrodoxin-fold anticodon-binding domain CDG55_03920 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily CDG55_03920 IPR012340 Nucleic acid-binding, OB-fold CDG55_03920 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CDG55_03920 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain CDG55_03920 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CDG55_03925 IPR005684 Integration host factor, alpha subunit CDG55_03925 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CDG55_03925 IPR020816 Histone-like DNA-binding protein, conserved site CDG55_03925 IPR000119 Histone-like DNA-binding protein CDG55_03935 IPR003593 AAA+ ATPase domain CDG55_03935 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CDG55_03935 IPR036269 Rho termination factor, N-terminal domain superfamily CDG55_03935 IPR004665 Transcription termination factor Rho CDG55_03935 IPR011113 Rho termination factor, RNA-binding domain CDG55_03935 IPR011112 Rho termination factor, N-terminal CDG55_03935 IPR011129 Cold shock domain CDG55_03935 IPR012340 Nucleic acid-binding, OB-fold CDG55_03935 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_03935 IPR041703 Transcription termination factor Rho, ATP binding domain CDG55_03940 IPR013766 Thioredoxin domain CDG55_03940 IPR017937 Thioredoxin, conserved site CDG55_03940 IPR036249 Thioredoxin-like superfamily CDG55_03940 IPR005746 Thioredoxin CDG55_03945 IPR030673 Pyrophosphatase, GppA/Ppx-type CDG55_03945 IPR003695 Ppx/GppA phosphatase CDG55_03945 IPR022371 Exopolyphosphatase CDG55_03950 IPR029045 ClpP/crotonase-like domain superfamily CDG55_03950 IPR001095 Acetyl-CoA carboxylase, alpha subunit CDG55_03950 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CDG55_03955 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal CDG55_03955 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CDG55_03955 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal CDG55_03955 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain CDG55_03955 IPR012094 tRNA(Ile)-lysidine synthase CDG55_03955 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_03960 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDG55_03960 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CDG55_03960 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CDG55_03960 IPR000304 Pyrroline-5-carboxylate reductase CDG55_03960 IPR036291 NAD(P)-binding domain superfamily CDG55_03965 IPR003425 CCB3/YggT CDG55_03970 IPR001098 DNA-directed DNA polymerase, family A, palm domain CDG55_03970 IPR020045 DNA polymerase I-like, H3TH domain CDG55_03970 IPR018320 DNA polymerase 1 CDG55_03970 IPR002298 DNA polymerase A CDG55_03970 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CDG55_03970 IPR029060 PIN-like domain superfamily CDG55_03970 IPR012337 Ribonuclease H-like superfamily CDG55_03970 IPR036397 Ribonuclease H superfamily CDG55_03970 IPR002421 5'-3' exonuclease, N-terminal CDG55_03970 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CDG55_03970 IPR002562 3'-5' exonuclease domain CDG55_03970 IPR019760 DNA-directed DNA polymerase, family A, conserved site CDG55_03970 IPR008918 Helix-hairpin-helix motif, class 2 CDG55_03990 IPR037257 General secretory system II, protein E, N-terminal superfamily CDG55_03990 IPR013369 Type II secretion system GspE CDG55_03990 IPR042181 Type II secretion system, protein E, N-terminal CDG55_03990 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_03990 IPR001482 Type II/IV secretion system protein CDG55_03995 IPR015946 K homology domain-like, alpha/beta CDG55_03995 IPR019953 Organic hydroperoxide resistance protein famiy CDG55_03995 IPR003718 OsmC/Ohr family CDG55_03995 IPR036102 OsmC/Ohr superfamily CDG55_04000 IPR000835 MarR-type HTH domain CDG55_04000 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_04000 IPR036390 Winged helix DNA-binding domain superfamily CDG55_04010 IPR001110 Uncharacterised protein family UPF0012, conserved site CDG55_04010 IPR003010 Carbon-nitrogen hydrolase CDG55_04010 IPR036526 Carbon-nitrogen hydrolase superfamily CDG55_04055 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CDG55_04055 IPR007634 RNA polymerase sigma factor 54, DNA-binding CDG55_04055 IPR007046 RNA polymerase sigma factor 54, core-binding domain CDG55_04055 IPR000394 RNA polymerase sigma factor 54 CDG55_04060 IPR036567 Ribosome hibernation promotion factor-like CDG55_04060 IPR003489 Ribosome hibernation promoting factor/RaiA CDG55_04065 IPR002634 BolA protein CDG55_04065 IPR036065 BolA-like superfamily CDG55_04070 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CDG55_04070 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CDG55_04070 IPR001986 Enolpyruvate transferase domain CDG55_04070 IPR036968 Enolpyruvate transferase domain superfamily CDG55_04070 IPR020683 Ankyrin repeat-containing domain CDG55_04070 IPR002110 Ankyrin repeat CDG55_04075 IPR018198 ATP phosphoribosyltransferase, conserved site CDG55_04075 IPR001348 ATP phosphoribosyltransferase HisG CDG55_04075 IPR013820 ATP phosphoribosyltransferase, catalytic domain CDG55_04075 IPR024893 ATP phosphoribosyltransferase HisG, short form CDG55_04085 IPR016161 Aldehyde/histidinol dehydrogenase CDG55_04085 IPR012131 Histidinol dehydrogenase CDG55_04085 IPR022695 Histidinol dehydrogenase, monofunctional CDG55_04085 IPR001692 Histidinol dehydrogenase, conserved site CDG55_04090 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_04090 IPR004839 Aminotransferase, class I/classII CDG55_04090 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_04090 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_04090 IPR005861 Histidinol-phosphate aminotransferase family CDG55_04095 IPR015890 Chorismate-utilising enzyme, C-terminal CDG55_04095 IPR006805 Anthranilate synthase component I, N-terminal CDG55_04095 IPR019999 Anthranilate synthase component I-like CDG55_04095 IPR005802 Aminodeoxychorismate synthase, component I CDG55_04095 IPR005801 ADC synthase CDG55_04140 IPR015797 NUDIX hydrolase-like domain superfamily CDG55_04140 IPR000086 NUDIX hydrolase domain CDG55_04140 IPR023735 Uncharacterised nudix hydrolase NudL CDG55_04140 IPR000059 NUDIX hydrolase, NudL, conserved site CDG55_04145 IPR001451 Hexapeptide repeat CDG55_04145 IPR011004 Trimeric LpxA-like superfamily CDG55_04150 IPR000905 Gcp-like domain CDG55_04150 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB CDG55_04155 IPR003824 Undecaprenyl-diphosphatase UppP CDG55_04160 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_04160 IPR007536 Ribosomal RNA small subunit methyltransferase J CDG55_04170 IPR000801 Putative esterase CDG55_04170 IPR029058 Alpha/Beta hydrolase fold CDG55_04170 IPR014186 S-formylglutathione hydrolase CDG55_04180 IPR011060 Ribulose-phosphate binding barrel CDG55_04180 IPR013785 Aldolase-type TIM barrel CDG55_04180 IPR026019 Ribulose-phosphate 3-epimerase CDG55_04180 IPR000056 Ribulose-phosphate 3-epimerase-like CDG55_04190 IPR008972 Cupredoxin CDG55_04190 IPR034282 Copper resistance protein CopA, second cupredoxin domain CDG55_04190 IPR002355 Multicopper oxidase, copper-binding site CDG55_04190 IPR033138 Multicopper oxidases, conserved site CDG55_04190 IPR034284 Copper resistance protein, first cupredoxin domain CDG55_04190 IPR034279 Copper resistance protein, third cupredoxin domain CDG55_04190 IPR011707 Multicopper oxidase, type 3 CDG55_04190 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDG55_04190 IPR001117 Multicopper oxidase, type 1 CDG55_04190 IPR006376 Copper-resistance protein CopA CDG55_04190 IPR011706 Multicopper oxidase, type 2 CDG55_04190 IPR006311 Twin-arginine translocation pathway, signal sequence CDG55_04210 IPR000390 Small multidrug resistance protein family CDG55_04215 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CDG55_04215 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CDG55_04215 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CDG55_04215 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CDG55_04215 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CDG55_04215 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_04215 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CDG55_04220 IPR016117 ArgJ-like domain superfamily CDG55_04220 IPR002813 Arginine biosynthesis protein ArgJ CDG55_04220 IPR042195 ArgJ beta chain, C-terminal domain CDG55_04225 IPR023513 Quinolinate synthase A, type 1 CDG55_04225 IPR036094 Quinolinate synthetase A superfamily CDG55_04225 IPR003473 Quinolinate synthetase A CDG55_04270 IPR006231 Malate:quinone-oxidoreductase CDG55_04270 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_04275 IPR000358 Ribonucleotide reductase small subunit family CDG55_04275 IPR033909 Ribonucleotide reductase small subunit CDG55_04275 IPR009078 Ferritin-like superfamily CDG55_04275 IPR012348 Ribonucleotide reductase-like CDG55_04290 IPR039718 Ribonucleoside-diphosphate reductase large subunit CDG55_04290 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CDG55_04290 IPR000788 Ribonucleotide reductase large subunit, C-terminal CDG55_04290 IPR013509 Ribonucleotide reductase large subunit, N-terminal CDG55_04290 IPR013346 Ribonucleotide reductase, class I , alpha subunit CDG55_04290 IPR005144 ATP-cone domain CDG55_04300 IPR001867 OmpR/PhoB-type DNA-binding domain CDG55_04300 IPR039420 Transcriptional regulatory protein WalR-like CDG55_04300 IPR011006 CheY-like superfamily CDG55_04300 IPR001789 Signal transduction response regulator, receiver domain CDG55_04300 IPR016032 Signal transduction response regulator, C-terminal effector CDG55_04300 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_04305 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDG55_04305 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDG55_04305 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDG55_04305 IPR005467 Histidine kinase domain CDG55_04305 IPR003660 HAMP domain CDG55_04305 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_04305 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_04320 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid CDG55_04320 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 CDG55_04320 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily CDG55_04325 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CDG55_04325 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CDG55_04330 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CDG55_04330 IPR023062 NADH dehydrogenase, subunit CD CDG55_04330 IPR001135 NADH-quinone oxidoreductase, subunit D CDG55_04330 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CDG55_04330 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily CDG55_04330 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CDG55_04330 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site CDG55_04330 IPR010218 NADH dehydrogenase, subunit C CDG55_04330 IPR029014 [NiFe]-hydrogenase, large subunit CDG55_04330 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CDG55_04335 IPR036249 Thioredoxin-like superfamily CDG55_04335 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal CDG55_04335 IPR042128 NuoE domain CDG55_04335 IPR002023 NADH-quinone oxidoreductase subunit E-like CDG55_04340 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CDG55_04340 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CDG55_04340 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain CDG55_04340 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily CDG55_04340 IPR019554 Soluble ligand binding domain CDG55_04340 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CDG55_04340 IPR011537 NADH ubiquinone oxidoreductase, F subunit CDG55_04345 IPR009010 Aspartate decarboxylase-like domain superfamily CDG55_04345 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CDG55_04345 IPR036010 2Fe-2S ferredoxin-like superfamily CDG55_04345 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDG55_04345 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CDG55_04345 IPR010228 NADH:ubiquinone oxidoreductase, subunit G CDG55_04345 IPR006656 Molybdopterin oxidoreductase CDG55_04345 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDG55_04350 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CDG55_04350 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CDG55_04355 IPR010226 NADH-quinone oxidoreductase, chain I CDG55_04355 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG55_04355 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG55_04360 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 CDG55_04360 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ CDG55_04365 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CDG55_04365 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CDG55_04370 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CDG55_04370 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CDG55_04370 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CDG55_04370 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 CDG55_04375 IPR010227 NADH-quinone oxidoreductase, chain M/4 CDG55_04375 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CDG55_04375 IPR003918 NADH:ubiquinone oxidoreductase CDG55_04380 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 CDG55_04380 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CDG55_04385 IPR034332 Uracil phosphoribosyltransferase, bacterial-type CDG55_04385 IPR005765 Uracil phosphoribosyl transferase CDG55_04385 IPR029057 Phosphoribosyltransferase-like CDG55_04385 IPR000836 Phosphoribosyltransferase domain CDG55_04395 IPR012156 Cold shock, CspA CDG55_04395 IPR011129 Cold shock domain CDG55_04395 IPR019844 Cold-shock (CSD) domain CDG55_04395 IPR002059 Cold-shock protein, DNA-binding CDG55_04395 IPR012340 Nucleic acid-binding, OB-fold CDG55_04400 IPR036390 Winged helix DNA-binding domain superfamily CDG55_04400 IPR005119 LysR, substrate-binding CDG55_04400 IPR000847 Transcription regulator HTH, LysR CDG55_04400 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_04405 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDG55_04405 IPR033892 Ferredoxin--NADP reductase, bacteria CDG55_04405 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDG55_04405 IPR017927 FAD-binding domain, ferredoxin reductase-type CDG55_04405 IPR017938 Riboflavin synthase-like beta-barrel CDG55_04405 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDG55_04405 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG55_04420 IPR008910 Conserved TM helix CDG55_04430 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like CDG55_04430 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_04430 IPR023166 HI0933-like insert domain superfamily CDG55_04440 IPR005966 D-cysteine desulfhydrase CDG55_04440 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG55_04440 IPR001926 Pyridoxal-phosphate dependent enzyme CDG55_04440 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CDG55_04460 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_04460 IPR010354 Oleate hydratase CDG55_04470 IPR017782 Hydroxyacylglutathione hydrolase CDG55_04470 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain CDG55_04470 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG55_04470 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain CDG55_04470 IPR001279 Metallo-beta-lactamase CDG55_04480 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain CDG55_04480 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CDG55_04480 IPR002547 tRNA-binding domain CDG55_04480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_04480 IPR012340 Nucleic acid-binding, OB-fold CDG55_04480 IPR029038 Methionyl-tRNA synthetase, Zn-domain CDG55_04480 IPR033911 Methioninyl-tRNA synthetase core domain CDG55_04480 IPR015413 Methionyl/Leucyl tRNA synthetase CDG55_04480 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDG55_04480 IPR014758 Methionyl-tRNA synthetase CDG55_04480 IPR023458 Methionine-tRNA ligase, type 1 CDG55_04480 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal CDG55_04490 IPR000182 GNAT domain CDG55_04490 IPR016181 Acyl-CoA N-acyltransferase CDG55_04500 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CDG55_04500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_04500 IPR000808 Mrp, conserved site CDG55_04500 IPR019591 Mrp/NBP35 ATP-binding protein CDG55_04500 IPR034904 Fe-S cluster assembly domain superfamily CDG55_04515 IPR036157 dUTPase-like superfamily CDG55_04515 IPR011962 dCTP deaminase CDG55_04515 IPR029054 dUTPase-like CDG55_04515 IPR033704 dUTPase, trimeric CDG55_04545 IPR032886 tRNA-dihydrouridine(16) synthase CDG55_04545 IPR035587 DUS-like, FMN-binding domain CDG55_04545 IPR013785 Aldolase-type TIM barrel CDG55_04545 IPR018517 tRNA-dihydrouridine synthase, conserved site CDG55_04545 IPR001269 tRNA-dihydrouridine synthase CDG55_04545 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal CDG55_04560 IPR022941 Signal recognition particle, SRP54 subunit CDG55_04560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_04560 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily CDG55_04560 IPR003593 AAA+ ATPase domain CDG55_04560 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CDG55_04560 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CDG55_04560 IPR004780 Signal recognition particle protein CDG55_04560 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CDG55_04560 IPR013822 Signal recognition particle SRP54, helical bundle CDG55_04565 IPR004619 Type III pantothenate kinase CDG55_04575 IPR002781 Transmembrane protein TauE-like CDG55_04595 IPR003395 RecF/RecN/SMC, N-terminal CDG55_04595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_04595 IPR024704 Structural maintenance of chromosomes protein CDG55_04595 IPR010935 SMCs flexible hinge CDG55_04595 IPR011890 Structural maintenance of chromosomes protein, prokaryotic CDG55_04595 IPR036277 SMCs flexible hinge superfamily CDG55_04605 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CDG55_04605 IPR010994 RuvA domain 2-like CDG55_04605 IPR013840 NAD-dependent DNA ligase, N-terminal CDG55_04605 IPR001357 BRCT domain CDG55_04605 IPR036420 BRCT domain superfamily CDG55_04605 IPR041663 DisA/LigA, helix-hairpin-helix motif CDG55_04605 IPR004150 NAD-dependent DNA ligase, OB-fold CDG55_04605 IPR033136 NAD-dependent DNA ligase, conserved site CDG55_04605 IPR012340 Nucleic acid-binding, OB-fold CDG55_04605 IPR001679 NAD-dependent DNA ligase CDG55_04605 IPR013839 NAD-dependent DNA ligase, adenylation CDG55_04605 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CDG55_04605 IPR018239 NAD-dependent DNA ligase, active site CDG55_04615 IPR009078 Ferritin-like superfamily CDG55_04615 IPR009040 Ferritin-like diiron domain CDG55_04615 IPR012347 Ferritin-like CDG55_04615 IPR002024 Bacterioferritin CDG55_04615 IPR008331 Ferritin/DPS protein domain CDG55_04620 IPR036249 Thioredoxin-like superfamily CDG55_04620 IPR024706 Peroxiredoxin, AhpC-type CDG55_04620 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDG55_04620 IPR013766 Thioredoxin domain CDG55_04625 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CDG55_04625 IPR029058 Alpha/Beta hydrolase fold CDG55_04625 IPR000073 Alpha/beta hydrolase fold-1 CDG55_04625 IPR013216 Methyltransferase type 11 CDG55_04625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_04630 IPR013785 Aldolase-type TIM barrel CDG55_04630 IPR005814 Aminotransferase class-III CDG55_04630 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA CDG55_04630 IPR007197 Radical SAM CDG55_04630 IPR010722 Biotin and thiamin synthesis-associated domain CDG55_04630 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_04630 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_04630 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_04630 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CDG55_04630 IPR006638 Elp3/MiaB/NifB CDG55_04635 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CDG55_04635 IPR004839 Aminotransferase, class I/classII CDG55_04635 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_04635 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type CDG55_04635 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_04635 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_04640 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CDG55_04640 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_04645 IPR004472 Dethiobiotin synthase BioD CDG55_04645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_04660 IPR039424 Solute-binding protein family 5 CDG55_04660 IPR030678 Peptide/nickel binding protein, MppA-type CDG55_04660 IPR023765 Solute-binding protein family 5, conserved site CDG55_04660 IPR000914 Solute-binding protein family 5 domain CDG55_04665 IPR039424 Solute-binding protein family 5 CDG55_04665 IPR030678 Peptide/nickel binding protein, MppA-type CDG55_04665 IPR000914 Solute-binding protein family 5 domain CDG55_04670 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CDG55_04670 IPR001567 Peptidase M3A/M3B catalytic domain CDG55_04675 IPR035906 MetI-like superfamily CDG55_04675 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDG55_04680 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDG55_04680 IPR035906 MetI-like superfamily CDG55_04680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDG55_04685 IPR003593 AAA+ ATPase domain CDG55_04685 IPR003439 ABC transporter-like CDG55_04685 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDG55_04685 IPR017871 ABC transporter, conserved site CDG55_04685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_04690 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CDG55_04690 IPR002942 RNA-binding S4 domain CDG55_04690 IPR036986 RNA-binding S4 domain superfamily CDG55_04690 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CDG55_04690 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CDG55_04690 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDG55_04690 IPR006145 Pseudouridine synthase, RsuA/RluA CDG55_04695 IPR005234 Chromosome segregation/condensation protein ScpB CDG55_04695 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_04695 IPR036390 Winged helix DNA-binding domain superfamily CDG55_04700 IPR003768 Segregation and condensation protein A CDG55_04710 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDG55_04710 IPR006070 YrdC-like domain CDG55_04715 IPR007411 Elongation factor P hydroxylase CDG55_04720 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CDG55_04720 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria CDG55_04725 IPR011332 Zinc-binding ribosomal protein CDG55_04725 IPR002677 Ribosomal protein L32p CDG55_04730 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CDG55_04730 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CDG55_04730 IPR024925 Malonyl CoA-acyl carrier protein transacylase CDG55_04730 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG55_04730 IPR014043 Acyl transferase CDG55_04730 IPR001227 Acyl transferase domain superfamily CDG55_04735 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_04735 IPR036291 NAD(P)-binding domain superfamily CDG55_04735 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDG55_04735 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDG55_04740 IPR006162 Phosphopantetheine attachment site CDG55_04740 IPR009081 Phosphopantetheine binding ACP domain CDG55_04740 IPR036736 ACP-like superfamily CDG55_04740 IPR003231 Acyl carrier protein (ACP) CDG55_04745 IPR003231 Acyl carrier protein (ACP) CDG55_04745 IPR009081 Phosphopantetheine binding ACP domain CDG55_04745 IPR036736 ACP-like superfamily CDG55_04745 IPR006162 Phosphopantetheine attachment site CDG55_04750 IPR018392 LysM domain CDG55_04750 IPR036779 LysM domain superfamily CDG55_04750 IPR014004 Transport-associated and nodulation domain, bacteria CDG55_04750 IPR007055 BON domain CDG55_04755 IPR013785 Aldolase-type TIM barrel CDG55_04755 IPR016084 Haem oxygenase-like, multi-helical CDG55_04755 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CDG55_04755 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CDG55_04755 IPR036206 Thiamin phosphate synthase superfamily CDG55_04755 IPR022998 Thiamine phosphate synthase/TenI CDG55_04755 IPR034291 Thiamine phosphate synthase CDG55_04755 IPR029056 Ribokinase-like CDG55_04755 IPR004305 Thiaminase-2/PQQC CDG55_04760 IPR023214 HAD superfamily CDG55_04760 IPR041492 Haloacid dehalogenase-like hydrolase CDG55_04760 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG55_04760 IPR036412 HAD-like superfamily CDG55_04765 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDG55_04765 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CDG55_04770 IPR003190 Aspartate decarboxylase CDG55_04770 IPR009010 Aspartate decarboxylase-like domain superfamily CDG55_04775 IPR018171 Peptidyl-tRNA hydrolase, conserved site CDG55_04775 IPR036416 Peptidyl-tRNA hydrolase superfamily CDG55_04775 IPR001328 Peptidyl-tRNA hydrolase CDG55_04780 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CDG55_04780 IPR020055 Ribosomal protein L25, short-form CDG55_04780 IPR029751 Ribosomal protein L25 CDG55_04780 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CDG55_04785 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CDG55_04785 IPR000836 Phosphoribosyltransferase domain CDG55_04785 IPR029057 Phosphoribosyltransferase-like CDG55_04785 IPR005946 Ribose-phosphate pyrophosphokinase CDG55_04785 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type CDG55_04785 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CDG55_04810 IPR013750 GHMP kinase, C-terminal domain CDG55_04810 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CDG55_04810 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_04810 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG55_04810 IPR006204 GHMP kinase N-terminal domain CDG55_04810 IPR036554 GHMP kinase, C-terminal domain superfamily CDG55_04815 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDG55_04815 IPR004565 Outer membrane lipoprotein LolB CDG55_04825 IPR018214 Glutamyl-tRNA reductase, conserved site CDG55_04825 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CDG55_04825 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase CDG55_04825 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain CDG55_04825 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal CDG55_04825 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily CDG55_04825 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily CDG55_04825 IPR036291 NAD(P)-binding domain superfamily CDG55_04830 IPR030846 DNA primase DnaG, bacteria CDG55_04830 IPR036977 DNA Primase, CHC2-type zinc finger CDG55_04830 IPR013173 DNA primase DnaG, DnaB-binding domain CDG55_04830 IPR006295 DNA primase, DnaG CDG55_04830 IPR019475 DNA primase, DnaB-helicase binding domain CDG55_04830 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CDG55_04830 IPR002694 Zinc finger, CHC2-type CDG55_04830 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CDG55_04830 IPR006171 TOPRIM domain CDG55_04830 IPR013264 DNA primase, catalytic core, N-terminal CDG55_04830 IPR034151 Bacterial DnaG primase, TOPRIM domain CDG55_04835 IPR017689 Outer membrane protein assembly factor BamD CDG55_04835 IPR039565 Outer membrane lipoprotein BamD-like CDG55_04835 IPR011990 Tetratricopeptide-like helical domain superfamily CDG55_04840 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDG55_04840 IPR036986 RNA-binding S4 domain superfamily CDG55_04840 IPR002942 RNA-binding S4 domain CDG55_04840 IPR006145 Pseudouridine synthase, RsuA/RluA CDG55_04840 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CDG55_04840 IPR006225 Pseudouridine synthase, RluC/RluD CDG55_04850 IPR005025 NADPH-dependent FMN reductase-like CDG55_04850 IPR008254 Flavodoxin/nitric oxide synthase CDG55_04850 IPR029039 Flavoprotein-like superfamily CDG55_04855 IPR020081 SsrA-binding protein, conserved site CDG55_04855 IPR000037 SsrA-binding protein CDG55_04855 IPR023620 Small protein B CDG55_04955 IPR010998 Integrase/recombinase, N-terminal CDG55_04955 IPR025166 Integrase, DNA-binding domain CDG55_04955 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDG55_04955 IPR002104 Integrase, catalytic domain CDG55_04955 IPR013762 Integrase-like, catalytic domain superfamily CDG55_04955 IPR038488 Integrase, DNA-binding domain superfamily CDG55_04960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_04960 IPR001980 Phosphopantetheine adenylyltransferase CDG55_04960 IPR004821 Cytidyltransferase-like domain CDG55_04965 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG55_04965 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG55_04990 IPR003010 Carbon-nitrogen hydrolase CDG55_04990 IPR003694 NAD(+) synthetase CDG55_04990 IPR022310 NAD/GMP synthase CDG55_04990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_04990 IPR000132 Nitrilase/cyanide hydratase, conserved site CDG55_04990 IPR014445 Glutamine-dependent NAD(+) synthetase CDG55_04990 IPR036526 Carbon-nitrogen hydrolase superfamily CDG55_05010 IPR014030 Beta-ketoacyl synthase, N-terminal CDG55_05010 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDG55_05010 IPR016039 Thiolase-like CDG55_05010 IPR000794 Beta-ketoacyl synthase CDG55_05010 IPR018201 Beta-ketoacyl synthase, active site CDG55_05010 IPR014031 Beta-ketoacyl synthase, C-terminal CDG55_05015 IPR024787 EcsC protein CDG55_05020 IPR005679 Ribosomal protein S12, bacterial-type CDG55_05020 IPR006032 Ribosomal protein S12/S23 CDG55_05020 IPR012340 Nucleic acid-binding, OB-fold CDG55_05025 IPR000235 Ribosomal protein S5/S7 CDG55_05025 IPR020606 Ribosomal protein S7, conserved site CDG55_05025 IPR023798 Ribosomal protein S7 domain CDG55_05025 IPR036823 Ribosomal protein S7 domain superfamily CDG55_05025 IPR005717 Ribosomal protein S7, bacterial/organellar-type CDG55_05030 IPR009022 Elongation factor G, domain III CDG55_05030 IPR000795 Transcription factor, GTP-binding domain CDG55_05030 IPR041095 Elongation Factor G, domain II CDG55_05030 IPR005225 Small GTP-binding protein domain CDG55_05030 IPR031157 Tr-type G domain, conserved site CDG55_05030 IPR005517 Translation elongation factor EFG/EF2, domain IV CDG55_05030 IPR004540 Translation elongation factor EFG/EF2 CDG55_05030 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG55_05030 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_05030 IPR035647 EF-G domain III/V-like CDG55_05030 IPR004161 Translation elongation factor EFTu-like, domain 2 CDG55_05030 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05030 IPR000640 Elongation factor EFG, domain V-like CDG55_05030 IPR009000 Translation protein, beta-barrel domain superfamily CDG55_05030 IPR035649 EFG, domain V CDG55_05035 IPR000795 Transcription factor, GTP-binding domain CDG55_05035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05035 IPR005225 Small GTP-binding protein domain CDG55_05035 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDG55_05035 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CDG55_05035 IPR004161 Translation elongation factor EFTu-like, domain 2 CDG55_05035 IPR033720 Elongation factor Tu, domain 2 CDG55_05035 IPR031157 Tr-type G domain, conserved site CDG55_05035 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CDG55_05035 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CDG55_05035 IPR009000 Translation protein, beta-barrel domain superfamily CDG55_05050 IPR016181 Acyl-CoA N-acyltransferase CDG55_05050 IPR006464 N-acetyltransferase RimI/Ard1 CDG55_05050 IPR000182 GNAT domain CDG55_05055 IPR016181 Acyl-CoA N-acyltransferase CDG55_05055 IPR017138 Aspartate/glutamate leucyltransferase CDG55_05055 IPR030700 N-end rule aminoacyl transferase CDG55_05055 IPR007472 N-end rule aminoacyl transferase, C-terminal CDG55_05055 IPR007471 N-end aminoacyl transferase, N-terminal CDG55_05060 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase CDG55_05060 IPR016181 Acyl-CoA N-acyltransferase CDG55_05060 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal CDG55_05065 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CDG55_05065 IPR005982 Thioredoxin reductase CDG55_05065 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_05065 IPR023753 FAD/NAD(P)-binding domain CDG55_05070 IPR036390 Winged helix DNA-binding domain superfamily CDG55_05070 IPR025199 DNA translocase FtsK, 4TM region CDG55_05070 IPR041027 FtsK alpha domain CDG55_05070 IPR002543 FtsK domain CDG55_05070 IPR018541 FtsK gamma domain CDG55_05070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05070 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_05075 IPR001123 Amino acid exporter protein, LeuE-type CDG55_05075 IPR004778 Homoserine/Threonine efflux protein CDG55_05085 IPR036707 Cell division topological specificity factor MinE superfamily CDG55_05085 IPR005527 Cell division topological specificity factor MinE CDG55_05090 IPR010223 ATP binding protein MinD, bacterial-type CDG55_05090 IPR025501 ATP binding protein MinD CDG55_05090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05090 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDG55_05095 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily CDG55_05095 IPR005526 Septum formation inhibitor MinC, C-terminal CDG55_05095 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CDG55_05095 IPR013033 Septum formation inhibitor MinC CDG55_05105 IPR002123 Phospholipid/glycerol acyltransferase CDG55_05110 IPR039567 Glycine zipper domain CDG55_05110 IPR006664 Outer membrane protein, bacterial CDG55_05110 IPR036737 OmpA-like domain superfamily CDG55_05110 IPR006690 Outer membrane protein, OmpA-like, conserved site CDG55_05110 IPR006665 OmpA-like domain CDG55_05115 IPR014016 UvrD-like helicase, ATP-binding domain CDG55_05115 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05115 IPR000212 DNA helicase, UvrD/REP type CDG55_05115 IPR014017 UvrD-like DNA helicase, C-terminal CDG55_05115 IPR005752 ATP-dependent DNA helicase Rep CDG55_05115 IPR034739 UvrD/AddA helicase, N-terminal CDG55_05115 IPR013986 DExx box DNA helicase domain superfamily CDG55_05120 IPR033704 dUTPase, trimeric CDG55_05120 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase CDG55_05120 IPR036157 dUTPase-like superfamily CDG55_05120 IPR029054 dUTPase-like CDG55_05125 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CDG55_05125 IPR005843 Alpha-D-phosphohexomutase, C-terminal CDG55_05125 IPR005841 Alpha-D-phosphohexomutase superfamily CDG55_05125 IPR016066 Alpha-D-phosphohexomutase, conserved site CDG55_05125 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CDG55_05125 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CDG55_05125 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CDG55_05125 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CDG55_05130 IPR036393 Acetylglutamate kinase-like superfamily CDG55_05130 IPR004662 Acetylglutamate kinase family CDG55_05130 IPR041727 N-Acetyl-L-glutamate kinase, cyclic CDG55_05130 IPR001048 Aspartate/glutamate/uridylate kinase CDG55_05130 IPR037528 Acetylglutamate kinase ArgB CDG55_05140 IPR029055 Nucleophile aminohydrolases, N-terminal CDG55_05140 IPR017932 Glutamine amidotransferase type 2 domain CDG55_05140 IPR026869 Putative glutamine amidotransferase type 2 CDG55_05145 IPR016131 Haemerythrin, iron-binding site CDG55_05145 IPR012827 Haemerythrin, metal-binding domain CDG55_05145 IPR035938 Hemerythrin-like superfamily CDG55_05145 IPR023504 Bacteriohemerythrin-like protein CDG55_05145 IPR012312 Haemerythrin-like CDG55_05155 IPR005346 RnfH protein CDG55_05155 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDG55_05155 IPR037021 RnfH superfamily CDG55_05160 IPR026592 Outer membrane protein assembly factor BamE CDG55_05160 IPR037873 BamE-like CDG55_05160 IPR007450 Lipoprotein SmpA/OmlA CDG55_05165 IPR036390 Winged helix DNA-binding domain superfamily CDG55_05165 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_05165 IPR002481 Ferric-uptake regulator CDG55_05170 IPR006321 Pilus retraction protein PilT CDG55_05170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05170 IPR003593 AAA+ ATPase domain CDG55_05170 IPR001482 Type II/IV secretion system protein CDG55_05175 IPR001482 Type II/IV secretion system protein CDG55_05175 IPR006321 Pilus retraction protein PilT CDG55_05175 IPR003593 AAA+ ATPase domain CDG55_05175 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05180 IPR029066 PLP-binding barrel CDG55_05180 IPR001608 Alanine racemase, N-terminal CDG55_05180 IPR011078 Pyridoxal phosphate homeostasis protein CDG55_05185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05190 IPR029052 Metallo-dependent phosphatase-like CDG55_05190 IPR004593 Nuclease SbcCD subunit D CDG55_05190 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CDG55_05190 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CDG55_05190 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain CDG55_05195 IPR029045 ClpP/crotonase-like domain superfamily CDG55_05195 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDG55_05195 IPR001753 Enoyl-CoA hydratase/isomerase CDG55_05195 IPR014748 Enoyl-CoA hydratase, C-terminal CDG55_05210 IPR010099 Epimerase family protein SDR39U1 CDG55_05210 IPR013549 Domain of unknown function DUF1731 CDG55_05210 IPR036291 NAD(P)-binding domain superfamily CDG55_05210 IPR001509 NAD-dependent epimerase/dehydratase CDG55_05215 IPR012727 Glycine oxidase ThiO CDG55_05215 IPR006076 FAD dependent oxidoreductase CDG55_05215 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_05220 IPR030656 Delta-aminolevulinic acid dehydratase, active site CDG55_05220 IPR001731 Delta-aminolevulinic acid dehydratase CDG55_05220 IPR013785 Aldolase-type TIM barrel CDG55_05225 IPR003736 Phenylacetic acid degradation-related domain CDG55_05225 IPR006683 Thioesterase domain CDG55_05225 IPR029069 HotDog domain superfamily CDG55_05230 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG55_05230 IPR005694 Efflux pump membrane protein CDG55_05235 IPR004638 Drug resistance transporter EmrB-like CDG55_05235 IPR011701 Major facilitator superfamily CDG55_05235 IPR020846 Major facilitator superfamily domain CDG55_05235 IPR036259 MFS transporter superfamily CDG55_05280 IPR010998 Integrase/recombinase, N-terminal CDG55_05280 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDG55_05280 IPR038488 Integrase, DNA-binding domain superfamily CDG55_05280 IPR002104 Integrase, catalytic domain CDG55_05280 IPR013762 Integrase-like, catalytic domain superfamily CDG55_05280 IPR025166 Integrase, DNA-binding domain CDG55_05300 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain CDG55_05300 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase CDG55_05300 IPR029069 HotDog domain superfamily CDG55_05300 IPR006683 Thioesterase domain CDG55_05310 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CDG55_05310 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05310 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CDG55_05315 IPR038590 YaeQ superfamily CDG55_05315 IPR009822 YaeQ CDG55_05315 IPR011335 Restriction endonuclease type II-like CDG55_05320 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG55_05325 IPR025668 Transposase DDE domain CDG55_05335 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDG55_05335 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal CDG55_05335 IPR002509 NodB homology domain CDG55_05335 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB CDG55_05340 IPR029044 Nucleotide-diphospho-sugar transferases CDG55_05340 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA CDG55_05340 IPR001173 Glycosyltransferase 2-like CDG55_05355 IPR038607 PhoD-like superfamily CDG55_05355 IPR032093 Phospholipase D, N-terminal CDG55_05355 IPR008963 Purple acid phosphatase-like, N-terminal CDG55_05355 IPR006311 Twin-arginine translocation pathway, signal sequence CDG55_05355 IPR018946 Alkaline phosphatase D-related CDG55_05370 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CDG55_05370 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CDG55_05370 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CDG55_05370 IPR036291 NAD(P)-binding domain superfamily CDG55_05370 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CDG55_05375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_05375 IPR004498 Ribosomal protein L11 methyltransferase CDG55_05385 IPR000577 Carbohydrate kinase, FGGY CDG55_05385 IPR018485 Carbohydrate kinase, FGGY, C-terminal CDG55_05385 IPR018483 Carbohydrate kinase, FGGY, conserved site CDG55_05385 IPR018484 Carbohydrate kinase, FGGY, N-terminal CDG55_05385 IPR005999 Glycerol kinase CDG55_05390 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CDG55_05390 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_05390 IPR001034 DeoR-type HTH domain CDG55_05390 IPR014036 DeoR C-terminal sensor domain CDG55_05390 IPR036390 Winged helix DNA-binding domain superfamily CDG55_05390 IPR037171 NagB/RpiA transferase-like CDG55_05395 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily CDG55_05395 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CDG55_05395 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_05395 IPR006076 FAD dependent oxidoreductase CDG55_05395 IPR031656 Alpha-glycerophosphate oxidase, C-terminal CDG55_05410 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal CDG55_05410 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising CDG55_05410 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain CDG55_05410 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal CDG55_05410 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site CDG55_05410 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal CDG55_05415 IPR001206 Diacylglycerol kinase, catalytic domain CDG55_05415 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CDG55_05415 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CDG55_05415 IPR005218 Diacylglycerol/lipid kinase CDG55_05425 IPR011032 GroES-like superfamily CDG55_05425 IPR018369 Chaperonin GroES, conserved site CDG55_05425 IPR037124 GroES chaperonin superfamily CDG55_05425 IPR020818 GroES chaperonin family CDG55_05430 IPR001844 Chaperonin Cpn60 CDG55_05430 IPR018370 Chaperonin Cpn60, conserved site CDG55_05430 IPR027413 GroEL-like equatorial domain superfamily CDG55_05430 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDG55_05430 IPR027409 GroEL-like apical domain superfamily CDG55_05430 IPR002423 Chaperonin Cpn60/TCP-1 family CDG55_05445 IPR038251 PdxB, dimerisation domain superfamily CDG55_05445 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDG55_05445 IPR036291 NAD(P)-binding domain superfamily CDG55_05445 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain CDG55_05445 IPR020921 Erythronate-4-phosphate dehydrogenase CDG55_05445 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDG55_05445 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDG55_05450 IPR004525 Elongation factor P--(R)-beta-lysine ligase CDG55_05450 IPR006195 Aminoacyl-tRNA synthetase, class II CDG55_05450 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CDG55_05450 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CDG55_05460 IPR005532 Sulfatase-modifying factor enzyme CDG55_05460 IPR016187 C-type lectin fold CDG55_05460 IPR042095 Sulfatase-modifying factor enzyme superfamily CDG55_05465 IPR017850 Alkaline-phosphatase-like, core domain superfamily CDG55_05465 IPR024607 Sulfatase, conserved site CDG55_05465 IPR000917 Sulfatase, N-terminal CDG55_05475 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal CDG55_05475 IPR035903 HesB-like domain superfamily CDG55_05475 IPR017726 Fe/S biogenesis protein NfuA CDG55_05475 IPR034904 Fe-S cluster assembly domain superfamily CDG55_05475 IPR000361 FeS cluster biogenesis CDG55_05480 IPR037066 TonB-dependent receptor, plug domain superfamily CDG55_05480 IPR010105 TonB-dependent siderophore receptor CDG55_05480 IPR039426 Vitamin B12 transporter BtuB-like CDG55_05480 IPR010917 TonB-dependent receptor, conserved site CDG55_05480 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG55_05480 IPR000531 TonB-dependent receptor-like, beta-barrel CDG55_05480 IPR012910 TonB-dependent receptor, plug domain CDG55_05490 IPR029058 Alpha/Beta hydrolase fold CDG55_05490 IPR000073 Alpha/beta hydrolase fold-1 CDG55_05490 IPR000639 Epoxide hydrolase-like CDG55_05495 IPR036874 Carbonic anhydrase superfamily CDG55_05495 IPR001765 Carbonic anhydrase CDG55_05495 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CDG55_05500 IPR013830 SGNH hydrolase-type esterase domain CDG55_05500 IPR036514 SGNH hydrolase superfamily CDG55_05505 IPR017871 ABC transporter, conserved site CDG55_05505 IPR003439 ABC transporter-like CDG55_05505 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05505 IPR003593 AAA+ ATPase domain CDG55_05510 IPR038766 Membrane component of ABC transporter, predicted CDG55_05515 IPR019734 Tetratricopeptide repeat CDG55_05515 IPR022764 Peptidase S54, rhomboid domain CDG55_05515 IPR035952 Rhomboid-like superfamily CDG55_05515 IPR013026 Tetratricopeptide repeat-containing domain CDG55_05515 IPR011990 Tetratricopeptide-like helical domain superfamily CDG55_05520 IPR011812 Biosynthetic peptidoglycan transglycosylase CDG55_05520 IPR023346 Lysozyme-like domain superfamily CDG55_05520 IPR036950 Penicillin binding protein transglycosylase domain CDG55_05520 IPR001264 Glycosyl transferase, family 51 CDG55_05525 IPR024953 Polyphosphate kinase middle domain CDG55_05525 IPR036830 Polyphosphate kinase middle domain superfamily CDG55_05525 IPR025200 Polyphosphate kinase C-terminal domain 2 CDG55_05525 IPR036832 Polyphosphate kinase N-terminal domain superfamily CDG55_05525 IPR041108 Polyphosphate kinase, C-terminal domain 1 CDG55_05525 IPR025198 Polyphosphate kinase N-terminal domain CDG55_05525 IPR003414 Polyphosphate kinase CDG55_05530 IPR004136 Nitronate monooxygenase CDG55_05530 IPR013785 Aldolase-type TIM barrel CDG55_05540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_05540 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily CDG55_05540 IPR002081 Cryptochrome/DNA photolyase class 1 CDG55_05540 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CDG55_05540 IPR006050 DNA photolyase, N-terminal CDG55_05540 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily CDG55_05540 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CDG55_05545 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG55_05550 IPR023753 FAD/NAD(P)-binding domain CDG55_05550 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_05555 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CDG55_05555 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CDG55_05555 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CDG55_05555 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CDG55_05555 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CDG55_05555 IPR012338 Beta-lactamase/transpeptidase-like CDG55_05565 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric CDG55_05575 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CDG55_05575 IPR006145 Pseudouridine synthase, RsuA/RluA CDG55_05575 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDG55_05575 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CDG55_05575 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CDG55_05580 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CDG55_05580 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic CDG55_05580 IPR024084 Isopropylmalate dehydrogenase-like domain CDG55_05585 IPR003719 Phenazine biosynthesis PhzF protein CDG55_05590 IPR011765 Peptidase M16, N-terminal CDG55_05590 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CDG55_05590 IPR001431 Peptidase M16, zinc-binding site CDG55_05590 IPR007863 Peptidase M16, C-terminal CDG55_05605 IPR039013 Inorganic triphosphatase YgiF CDG55_05605 IPR023577 CYTH domain CDG55_05605 IPR033469 CYTH-like domain superfamily CDG55_05605 IPR007899 CHAD domain CDG55_05615 IPR025668 Transposase DDE domain CDG55_05625 IPR033116 Serine proteases, trypsin family, serine active site CDG55_05625 IPR009003 Peptidase S1, PA clan CDG55_05625 IPR001314 Peptidase S1A, chymotrypsin family CDG55_05625 IPR001254 Serine proteases, trypsin domain CDG55_05625 IPR018114 Serine proteases, trypsin family, histidine active site CDG55_05630 IPR013785 Aldolase-type TIM barrel CDG55_05630 IPR034291 Thiamine phosphate synthase CDG55_05630 IPR036206 Thiamin phosphate synthase superfamily CDG55_05630 IPR022998 Thiamine phosphate synthase/TenI CDG55_05635 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CDG55_05635 IPR005814 Aminotransferase class-III CDG55_05635 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_05635 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_05635 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_05645 IPR006145 Pseudouridine synthase, RsuA/RluA CDG55_05645 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDG55_05645 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CDG55_05650 IPR001650 Helicase, C-terminal CDG55_05650 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG55_05650 IPR040766 RapA, N-terminal Tudor-like domain 2 CDG55_05650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05650 IPR022737 RNA polymerase recycling, bacterial, C-terminal CDG55_05650 IPR040765 RapA, N-terminal Tudor like domain 1 CDG55_05650 IPR000330 SNF2-related, N-terminal domain CDG55_05650 IPR038718 SNF2-like, N-terminal domain superfamily CDG55_05650 IPR023949 RNA polymerase-associated protein RapA CDG55_05655 IPR023188 DNA-binding protein Dps, conserved site CDG55_05655 IPR023067 DNA protection during starvation protein, gammaproteobacteria CDG55_05655 IPR002177 DNA-binding protein Dps CDG55_05655 IPR008331 Ferritin/DPS protein domain CDG55_05655 IPR012347 Ferritin-like CDG55_05655 IPR009078 Ferritin-like superfamily CDG55_05665 IPR023764 Transcriptional repressor HTH, FabR CDG55_05665 IPR001647 DNA-binding HTH domain, TetR-type CDG55_05665 IPR009057 Homeobox-like domain superfamily CDG55_05670 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDG55_05670 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG55_05670 IPR017927 FAD-binding domain, ferredoxin reductase-type CDG55_05670 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDG55_05670 IPR017938 Riboflavin synthase-like beta-barrel CDG55_05670 IPR012675 Beta-grasp domain superfamily CDG55_05670 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDG55_05670 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDG55_05670 IPR036010 2Fe-2S ferredoxin-like superfamily CDG55_05670 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDG55_05675 IPR005804 Fatty acid desaturase domain CDG55_05685 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_05685 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_05685 IPR004637 2,4-diaminobutyrate 4-transaminase CDG55_05685 IPR005814 Aminotransferase class-III CDG55_05685 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_05690 IPR021115 Pyridoxal-phosphate binding site CDG55_05690 IPR002129 Pyridoxal phosphate-dependent decarboxylase CDG55_05690 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_05690 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_05700 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDG55_05700 IPR035906 MetI-like superfamily CDG55_05700 IPR011864 Phosphate ABC transporter, permease protein PstC CDG55_05705 IPR035906 MetI-like superfamily CDG55_05705 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDG55_05705 IPR005672 Phosphate transport system permease protein PstA CDG55_05710 IPR003593 AAA+ ATPase domain CDG55_05710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05710 IPR015850 ABC transporter, phosphate import, PstB CDG55_05710 IPR017871 ABC transporter, conserved site CDG55_05710 IPR005670 Phosphate transport system permease protein 1 CDG55_05710 IPR003439 ABC transporter-like CDG55_05715 IPR013703 Peptidase S49, N-terminal proteobacteria CDG55_05715 IPR029045 ClpP/crotonase-like domain superfamily CDG55_05715 IPR002142 Peptidase S49 CDG55_05735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_05735 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDG55_05735 IPR004398 RNA methyltransferase, RsmD CDG55_05740 IPR012338 Beta-lactamase/transpeptidase-like CDG55_05740 IPR005311 Penicillin-binding protein, dimerisation domain CDG55_05740 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CDG55_05740 IPR017790 Penicillin-binding protein 2 CDG55_05740 IPR001460 Penicillin-binding protein, transpeptidase CDG55_05755 IPR000850 Adenylate kinase/UMP-CMP kinase CDG55_05755 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05755 IPR006259 Adenylate kinase subfamily CDG55_05755 IPR007862 Adenylate kinase, active site lid domain CDG55_05755 IPR033690 Adenylate kinase, conserved site CDG55_05770 IPR003593 AAA+ ATPase domain CDG55_05770 IPR011704 ATPase, dynein-related, AAA domain CDG55_05770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05780 IPR002035 von Willebrand factor, type A CDG55_05780 IPR008912 Uncharacterised protein family CoxE-like CDG55_05780 IPR036465 von Willebrand factor A-like domain superfamily CDG55_05790 IPR000445 Helix-hairpin-helix motif CDG55_05790 IPR005759 Endonuclease III CDG55_05790 IPR011257 DNA glycosylase CDG55_05790 IPR004036 Endonuclease III-like, conserved site-2 CDG55_05790 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CDG55_05790 IPR004035 Endonuclease III, iron-sulphur binding site CDG55_05790 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CDG55_05790 IPR003265 HhH-GPD domain CDG55_05795 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB CDG55_05795 IPR011005 Dihydropteroate synthase-like CDG55_05795 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG55_05795 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG55_05795 IPR007202 4Fe-4S domain CDG55_05795 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria CDG55_05800 IPR033524 Leu/Phe/Val dehydrogenases active site CDG55_05800 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CDG55_05800 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CDG55_05800 IPR014362 Glutamate dehydrogenase CDG55_05800 IPR036291 NAD(P)-binding domain superfamily CDG55_05800 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CDG55_05800 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CDG55_05810 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CDG55_05810 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type CDG55_05815 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG55_05815 IPR003742 RNA methyltransferase RlmH CDG55_05815 IPR029028 Alpha/beta knot methyltransferases CDG55_05820 IPR003959 ATPase, AAA-type, core CDG55_05820 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG55_05820 IPR008268 Peptidase S16, active site CDG55_05820 IPR015947 PUA-like superfamily CDG55_05820 IPR027065 Lon protease CDG55_05820 IPR003111 Lon, substrate-binding domain CDG55_05820 IPR003593 AAA+ ATPase domain CDG55_05820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05820 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_05820 IPR004815 Lon protease, bacterial/eukaryotic-type CDG55_05820 IPR027543 Lon protease, bacterial CDG55_05820 IPR008269 Peptidase S16, Lon proteolytic domain CDG55_05825 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CDG55_05825 IPR002698 5-formyltetrahydrofolate cyclo-ligase CDG55_05825 IPR037171 NagB/RpiA transferase-like CDG55_05835 IPR000551 MerR-type HTH domain CDG55_05835 IPR011794 Hg(II)-responsive transcriptional regulator CDG55_05835 IPR009061 Putative DNA-binding domain superfamily CDG55_05840 IPR008250 P-type ATPase, A domain superfamily CDG55_05840 IPR023298 P-type ATPase, transmembrane domain superfamily CDG55_05840 IPR018303 P-type ATPase, phosphorylation site CDG55_05840 IPR023299 P-type ATPase, cytoplasmic domain N CDG55_05840 IPR036412 HAD-like superfamily CDG55_05840 IPR023214 HAD superfamily CDG55_05840 IPR001757 P-type ATPase CDG55_05840 IPR027256 P-type ATPase, subfamily IB CDG55_05865 IPR011978 Uncharacterised protein family UPF0149 CDG55_05865 IPR036255 YgfB-like superfamily CDG55_05870 IPR007865 Aminopeptidase P, N-terminal CDG55_05870 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDG55_05870 IPR000994 Peptidase M24 CDG55_05870 IPR001714 Peptidase M24, methionine aminopeptidase CDG55_05870 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CDG55_05870 IPR036005 Creatinase/aminopeptidase-like CDG55_05875 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_05875 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CDG55_05875 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase CDG55_05875 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CDG55_05875 IPR002938 FAD-binding domain CDG55_05880 IPR002938 FAD-binding domain CDG55_05880 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CDG55_05880 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CDG55_05880 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_05890 IPR009061 Putative DNA-binding domain superfamily CDG55_05890 IPR011794 Hg(II)-responsive transcriptional regulator CDG55_05890 IPR000551 MerR-type HTH domain CDG55_05900 IPR035996 Tetrapyrrole methylase superfamily CDG55_05900 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CDG55_05900 IPR000878 Tetrapyrrole methylase CDG55_05900 IPR014777 Tetrapyrrole methylase, subdomain 1 CDG55_05900 IPR014776 Tetrapyrrole methylase, subdomain 2 CDG55_05900 IPR008189 rRNA small subunit methyltransferase I CDG55_05910 IPR011335 Restriction endonuclease type II-like CDG55_05910 IPR003509 Uncharacterised protein family UPF0102 CDG55_05910 IPR011856 tRNA endonuclease-like domain superfamily CDG55_05915 IPR007055 BON domain CDG55_05915 IPR014004 Transport-associated and nodulation domain, bacteria CDG55_05925 IPR015376 Zinc ribbon, NADH pyrophosphatase CDG55_05925 IPR022925 NADH pyrophosphatase NudC CDG55_05925 IPR015797 NUDIX hydrolase-like domain superfamily CDG55_05925 IPR020084 NUDIX hydrolase, conserved site CDG55_05925 IPR000086 NUDIX hydrolase domain CDG55_05935 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG55_05935 IPR012337 Ribonuclease H-like superfamily CDG55_05935 IPR036397 Ribonuclease H superfamily CDG55_05935 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CDG55_05935 IPR006309 DNA polymerase 3, epsilon subunit CDG55_05940 IPR018392 LysM domain CDG55_05940 IPR036779 LysM domain superfamily CDG55_05940 IPR023346 Lysozyme-like domain superfamily CDG55_05940 IPR008258 Transglycosylase SLT domain 1 CDG55_05940 IPR000189 Prokaryotic transglycosylase, active site CDG55_05945 IPR030678 Peptide/nickel binding protein, MppA-type CDG55_05945 IPR039424 Solute-binding protein family 5 CDG55_05945 IPR000914 Solute-binding protein family 5 domain CDG55_05950 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDG55_05950 IPR035906 MetI-like superfamily CDG55_05955 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDG55_05955 IPR035906 MetI-like superfamily CDG55_05955 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDG55_05960 IPR003593 AAA+ ATPase domain CDG55_05960 IPR003439 ABC transporter-like CDG55_05960 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_05960 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDG55_05960 IPR017871 ABC transporter, conserved site CDG55_05965 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDG55_05965 IPR023753 FAD/NAD(P)-binding domain CDG55_05965 IPR013785 Aldolase-type TIM barrel CDG55_05965 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_05980 IPR036397 Ribonuclease H superfamily CDG55_05980 IPR005987 Ribonuclease T CDG55_05980 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG55_05980 IPR012337 Ribonuclease H-like superfamily CDG55_05985 IPR006680 Amidohydrolase-related CDG55_05985 IPR004721 Dihydroorotase homodimeric type CDG55_05985 IPR002195 Dihydroorotase, conserved site CDG55_05985 IPR032466 Metal-dependent hydrolase CDG55_05990 IPR035919 EAL domain superfamily CDG55_05990 IPR001633 EAL domain CDG55_05990 IPR029016 GAF-like domain superfamily CDG55_05990 IPR000160 GGDEF domain CDG55_05990 IPR003018 GAF domain CDG55_05990 IPR013515 Phytochrome, central region CDG55_05990 IPR029787 Nucleotide cyclase CDG55_05990 IPR016132 Phytochrome chromophore attachment domain CDG55_05990 IPR001294 Phytochrome CDG55_06000 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CDG55_06000 IPR038071 UROD/MetE-like superfamily CDG55_06000 IPR006361 Uroporphyrinogen decarboxylase HemE CDG55_06005 IPR008535 Protein of unknown function DUF817 CDG55_06045 IPR013798 Indole-3-glycerol phosphate synthase CDG55_06045 IPR013785 Aldolase-type TIM barrel CDG55_06045 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CDG55_06045 IPR011060 Ribulose-phosphate binding barrel CDG55_06050 IPR005940 Anthranilate phosphoribosyl transferase CDG55_06050 IPR000312 Glycosyl transferase, family 3 CDG55_06050 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CDG55_06050 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CDG55_06050 IPR017459 Glycosyl transferase family 3, N-terminal domain CDG55_06060 IPR029062 Class I glutamine amidotransferase-like CDG55_06060 IPR017926 Glutamine amidotransferase CDG55_06060 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CDG55_06070 IPR007440 Chorismate--pyruvate lyase CDG55_06070 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDG55_06075 IPR006370 4-hydroxybenzoate polyprenyltransferase-like CDG55_06075 IPR039653 Prenyltransferase CDG55_06075 IPR000537 UbiA prenyltransferase family CDG55_06125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_06125 IPR005890 Nitrate transport ATP-binding subunit C/D CDG55_06125 IPR003593 AAA+ ATPase domain CDG55_06125 IPR017871 ABC transporter, conserved site CDG55_06125 IPR003439 ABC transporter-like CDG55_06140 IPR004807 UvrABC system, subunit B CDG55_06140 IPR041471 UvrB, interaction domain CDG55_06140 IPR024759 UvrB, YAD/RRR-motif-containing domain CDG55_06140 IPR001943 UVR domain CDG55_06140 IPR036876 UVR domain superfamily CDG55_06140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_06140 IPR001650 Helicase, C-terminal CDG55_06140 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG55_06140 IPR006935 Helicase/UvrB, N-terminal CDG55_06150 IPR004626 RarD protein CDG55_06165 IPR036291 NAD(P)-binding domain superfamily CDG55_06165 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CDG55_06165 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CDG55_06165 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CDG55_06165 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CDG55_06165 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CDG55_06170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_06170 IPR031167 OBG-type guanine nucleotide-binding (G) domain CDG55_06170 IPR006073 GTP binding domain CDG55_06170 IPR014100 GTP-binding protein Obg/CgtA CDG55_06170 IPR006074 GTP1/OBG, conserved site CDG55_06170 IPR006169 GTP1/OBG domain CDG55_06170 IPR036726 GTP1/OBG domain superfamily CDG55_06170 IPR035101 GTP-binding protein, Obg-type CDG55_06175 IPR036974 PUA domain superfamily CDG55_06175 IPR015947 PUA-like superfamily CDG55_06175 IPR002478 PUA domain CDG55_06175 IPR011529 Glutamate 5-kinase CDG55_06175 IPR001057 Glutamate/acetylglutamate kinase CDG55_06175 IPR041739 Glutamate-5-kinase domain CDG55_06175 IPR001048 Aspartate/glutamate/uridylate kinase CDG55_06175 IPR036393 Acetylglutamate kinase-like superfamily CDG55_06175 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CDG55_06175 IPR019797 Glutamate 5-kinase, conserved site CDG55_06185 IPR011673 Protein of unknown function DUF1615 CDG55_06190 IPR032887 tRNA-dihydrouridine synthase B CDG55_06190 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CDG55_06190 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CDG55_06190 IPR001269 tRNA-dihydrouridine synthase CDG55_06190 IPR035587 DUS-like, FMN-binding domain CDG55_06190 IPR018517 tRNA-dihydrouridine synthase, conserved site CDG55_06190 IPR013785 Aldolase-type TIM barrel CDG55_06195 IPR036390 Winged helix DNA-binding domain superfamily CDG55_06195 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_06195 IPR005119 LysR, substrate-binding CDG55_06195 IPR000847 Transcription regulator HTH, LysR CDG55_06200 IPR008220 Homoserine/serine acetyltransferase MetX-like CDG55_06200 IPR000073 Alpha/beta hydrolase fold-1 CDG55_06200 IPR029058 Alpha/Beta hydrolase fold CDG55_06205 IPR041364 Rubredoxin binding domain CDG55_06205 IPR023753 FAD/NAD(P)-binding domain CDG55_06205 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_06210 IPR018527 Rubredoxin, iron-binding site CDG55_06210 IPR024935 Rubredoxin domain CDG55_06210 IPR024934 Rubredoxin-like domain CDG55_06210 IPR024922 Rubredoxin CDG55_06220 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CDG55_06220 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CDG55_06220 IPR012340 Nucleic acid-binding, OB-fold CDG55_06220 IPR006195 Aminoacyl-tRNA synthetase, class II CDG55_06220 IPR002313 Lysine-tRNA ligase, class II CDG55_06220 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CDG55_06230 IPR002500 Phosphoadenosine phosphosulphate reductase CDG55_06230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_06230 IPR011784 Sulphate adenylyltransferase, small subunit CDG55_06235 IPR031157 Tr-type G domain, conserved site CDG55_06235 IPR002891 Adenylyl-sulfate kinase CDG55_06235 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain CDG55_06235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_06235 IPR005225 Small GTP-binding protein domain CDG55_06235 IPR011779 Sulphate adenylyltransferase, large subunit CDG55_06235 IPR000795 Transcription factor, GTP-binding domain CDG55_06235 IPR009000 Translation protein, beta-barrel domain superfamily CDG55_06235 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDG55_06245 IPR005170 Transporter-associated domain CDG55_06245 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG55_06245 IPR036318 FAD-binding, type PCMH-like superfamily CDG55_06245 IPR002550 CNNM, transmembrane domain CDG55_06245 IPR000644 CBS domain CDG55_06250 IPR005119 LysR, substrate-binding CDG55_06250 IPR000847 Transcription regulator HTH, LysR CDG55_06250 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_06250 IPR036390 Winged helix DNA-binding domain superfamily CDG55_06255 IPR039556 ICL/PEPM domain CDG55_06255 IPR040442 Pyruvate kinase-like domain superfamily CDG55_06255 IPR006254 Isocitrate lyase CDG55_06255 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CDG55_06260 IPR007298 Copper resistance lipoprotein NlpE CDG55_06260 IPR033450 NlpE, C-terminal OB domain CDG55_06260 IPR038139 NlpE, C-terminal domain superfamily CDG55_06270 IPR032678 tRNA synthetases class I, catalytic domain CDG55_06270 IPR015803 Cysteine-tRNA ligase CDG55_06270 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CDG55_06270 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CDG55_06270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_06270 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CDG55_06280 IPR035474 KpsF-like, SIS domain CDG55_06280 IPR000644 CBS domain CDG55_06280 IPR001347 Sugar isomerase (SIS) CDG55_06280 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CDG55_06285 IPR010023 KdsC family CDG55_06285 IPR036412 HAD-like superfamily CDG55_06285 IPR023214 HAD superfamily CDG55_06295 IPR014340 Lipopolysaccharide export system protein LptA CDG55_06295 IPR005653 Organic solvent tolerance-like, N-terminal CDG55_06300 IPR030921 LPS export ABC transporter, ATP-binding protein LptB CDG55_06300 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDG55_06300 IPR017871 ABC transporter, conserved site CDG55_06300 IPR003439 ABC transporter-like CDG55_06300 IPR003593 AAA+ ATPase domain CDG55_06300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_06305 IPR023582 Impact family CDG55_06305 IPR035647 EF-G domain III/V-like CDG55_06305 IPR001498 Impact, N-terminal CDG55_06305 IPR036956 Impact, N-terminal domain superfamily CDG55_06305 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_06305 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CDG55_06310 IPR011004 Trimeric LpxA-like superfamily CDG55_06310 IPR018357 Hexapeptide transferase, conserved site CDG55_06310 IPR001451 Hexapeptide repeat CDG55_06330 IPR000813 7Fe ferredoxin CDG55_06330 IPR022569 Ferredoxin, C-terminal CDG55_06330 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG55_06330 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG55_06335 IPR007696 DNA mismatch repair protein MutS, core CDG55_06335 IPR017261 DNA mismatch repair protein MutS/MSH CDG55_06335 IPR000432 DNA mismatch repair protein MutS, C-terminal CDG55_06335 IPR007860 DNA mismatch repair protein MutS, connector domain CDG55_06335 IPR036678 MutS, connector domain superfamily CDG55_06335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_06335 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CDG55_06335 IPR007861 DNA mismatch repair protein MutS, clamp CDG55_06335 IPR016151 DNA mismatch repair protein MutS, N-terminal CDG55_06335 IPR005748 DNA mismatch repair protein MutS CDG55_06335 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CDG55_06395 IPR036291 NAD(P)-binding domain superfamily CDG55_06395 IPR023756 Glyoxylate/hydroxypyruvate reductase B CDG55_06395 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDG55_06395 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDG55_06395 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDG55_06400 IPR002123 Phospholipid/glycerol acyltransferase CDG55_06400 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CDG55_06405 IPR001915 Peptidase M48 CDG55_06405 IPR030873 Beta-barrel assembly-enhancing protease CDG55_06405 IPR011990 Tetratricopeptide-like helical domain superfamily CDG55_06420 IPR042184 YqeY/Aim41, N-terminal domain CDG55_06420 IPR019004 Uncharacterised protein YqeY/Aim41 CDG55_06420 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 CDG55_06420 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like CDG55_06425 IPR018278 Ribosomal protein S21, conserved site CDG55_06425 IPR038380 Ribosomal protein S21 superfamily CDG55_06425 IPR001911 Ribosomal protein S21 CDG55_06430 IPR000905 Gcp-like domain CDG55_06430 IPR017861 Kae1/TsaD family CDG55_06430 IPR017860 Peptidase M22, conserved site CDG55_06430 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CDG55_06455 IPR005543 PASTA domain CDG55_06455 IPR008271 Serine/threonine-protein kinase, active site CDG55_06455 IPR017441 Protein kinase, ATP binding site CDG55_06455 IPR000719 Protein kinase domain CDG55_06455 IPR011009 Protein kinase-like domain superfamily CDG55_06495 IPR020557 Fumarate lyase, conserved site CDG55_06495 IPR000362 Fumarate lyase family CDG55_06495 IPR022761 Fumarate lyase, N-terminal CDG55_06495 IPR008948 L-Aspartase-like CDG55_06495 IPR013539 Adenylosuccinate lyase PurB, C-terminal CDG55_06495 IPR024083 Fumarase/histidase, N-terminal CDG55_06495 IPR004769 Adenylosuccinate lyase CDG55_06500 IPR035932 HflD-like superfamily CDG55_06500 IPR007451 High frequency lysogenization protein HflD CDG55_06505 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_06505 IPR023382 Adenine nucleotide alpha hydrolase-like domains CDG55_06505 IPR004506 tRNA-specific 2-thiouridylase CDG55_06510 IPR020476 NUDIX hydrolase CDG55_06510 IPR033713 Phosphatase NudJ CDG55_06510 IPR020084 NUDIX hydrolase, conserved site CDG55_06510 IPR000086 NUDIX hydrolase domain CDG55_06510 IPR015797 NUDIX hydrolase-like domain superfamily CDG55_06515 IPR021239 Protein of unknown function DUF2625 CDG55_06520 IPR011004 Trimeric LpxA-like superfamily CDG55_06520 IPR001451 Hexapeptide repeat CDG55_06525 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CDG55_06525 IPR012338 Beta-lactamase/transpeptidase-like CDG55_06525 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CDG55_06525 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CDG55_06525 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CDG55_06525 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CDG55_06540 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CDG55_06540 IPR030048 Survival protein SurE CDG55_06540 IPR036523 SurE-like phosphatase/nucleotidase superfamily CDG55_06545 IPR016047 Peptidase M23 CDG55_06545 IPR018392 LysM domain CDG55_06545 IPR011055 Duplicated hybrid motif CDG55_06545 IPR036779 LysM domain superfamily CDG55_06550 IPR036390 Winged helix DNA-binding domain superfamily CDG55_06550 IPR005119 LysR, substrate-binding CDG55_06550 IPR000847 Transcription regulator HTH, LysR CDG55_06550 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_06555 IPR008269 Peptidase S16, Lon proteolytic domain CDG55_06555 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_06555 IPR041699 Lon protease, AAA domain CDG55_06555 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG55_06555 IPR027065 Lon protease CDG55_06560 IPR011701 Major facilitator superfamily CDG55_06560 IPR020846 Major facilitator superfamily domain CDG55_06560 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 CDG55_06560 IPR036259 MFS transporter superfamily CDG55_06565 IPR037523 Vicinal oxygen chelate (VOC) domain CDG55_06565 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG55_06565 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDG55_06565 IPR004361 Glyoxalase I CDG55_06565 IPR018146 Glyoxalase I, conserved site CDG55_06570 IPR016833 Putative sodium bile acid cotransporter CDG55_06570 IPR038770 Sodium/solute symporter superfamily CDG55_06575 IPR042105 Ribosomal protein L31 superfamily CDG55_06575 IPR034704 L28p-like CDG55_06575 IPR002150 Ribosomal protein L31 CDG55_06575 IPR027491 Ribosomal protein L31 type A CDG55_06590 IPR007197 Radical SAM CDG55_06590 IPR022462 Lysine-2,3-aminomutase-like CDG55_06590 IPR013785 Aldolase-type TIM barrel CDG55_06590 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CDG55_06595 IPR015365 Elongation factor P, C-terminal CDG55_06595 IPR020599 Translation elongation factor P/YeiP CDG55_06595 IPR013185 Translation elongation factor, KOW-like CDG55_06595 IPR001059 Translation elongation factor P/YeiP, central CDG55_06595 IPR011768 Translation elongation factor P CDG55_06595 IPR008991 Translation protein SH3-like domain superfamily CDG55_06595 IPR014722 Ribosomal protein L2, domain 2 CDG55_06595 IPR012340 Nucleic acid-binding, OB-fold CDG55_06600 IPR003706 CstA, N-terminal domain CDG55_06600 IPR025299 CstA, C-terminal domain CDG55_06605 IPR007423 Selenoprotein, putative CDG55_06610 IPR011703 ATPase, AAA-3 CDG55_06610 IPR041628 ChlI/MoxR, AAA lid domain CDG55_06610 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_06620 IPR002931 Transglutaminase-like CDG55_06620 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal CDG55_06620 IPR025403 Domain of unknown function DUF4129 CDG55_06620 IPR038765 Papain-like cysteine peptidase superfamily CDG55_06645 IPR012093 Pirin CDG55_06645 IPR003829 Pirin, N-terminal domain CDG55_06645 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain CDG55_06645 IPR014710 RmlC-like jelly roll fold CDG55_06645 IPR011051 RmlC-like cupin domain superfamily CDG55_06650 IPR018223 Argininosuccinate synthase, conserved site CDG55_06650 IPR023434 Argininosuccinate synthase, type 1 subfamily CDG55_06650 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_06650 IPR001518 Argininosuccinate synthase CDG55_06650 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail CDG55_06650 IPR023437 Argininosuccinate synthase, type 2 subfamily CDG55_06650 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CDG55_06655 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_06655 IPR013785 Aldolase-type TIM barrel CDG55_06655 IPR023753 FAD/NAD(P)-binding domain CDG55_06655 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDG55_06760 IPR025166 Integrase, DNA-binding domain CDG55_06760 IPR038488 Integrase, DNA-binding domain superfamily CDG55_06760 IPR010998 Integrase/recombinase, N-terminal CDG55_06760 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDG55_06760 IPR002104 Integrase, catalytic domain CDG55_06760 IPR013762 Integrase-like, catalytic domain superfamily CDG55_06780 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDG55_06780 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDG55_06780 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDG55_06780 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type CDG55_06780 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDG55_06780 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDG55_06785 IPR029016 GAF-like domain superfamily CDG55_06785 IPR002197 DNA binding HTH domain, Fis-type CDG55_06785 IPR010113 Nif-specific regulatory protein CDG55_06785 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_06785 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDG55_06785 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDG55_06785 IPR003018 GAF domain CDG55_06785 IPR009057 Homeobox-like domain superfamily CDG55_06785 IPR002078 RNA polymerase sigma factor 54 interaction domain CDG55_06785 IPR025944 Sigma-54 interaction domain, conserved site CDG55_06785 IPR003593 AAA+ ATPase domain CDG55_06790 IPR001279 Metallo-beta-lactamase CDG55_06790 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG55_06795 IPR029021 Protein-tyrosine phosphatase-like CDG55_06795 IPR001279 Metallo-beta-lactamase CDG55_06795 IPR005939 Beta-lactamase hydrolase-like CDG55_06795 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG55_06800 IPR002781 Transmembrane protein TauE-like CDG55_06820 IPR003333 Mycolic acid cyclopropane synthase CDG55_06820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_06830 IPR023506 Trans-aconitate 2-methyltransferase CDG55_06830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_06830 IPR041698 Methyltransferase domain 25 CDG55_06830 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal CDG55_06835 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDG55_06835 IPR013727 Two-component sensor kinase, N-terminal CDG55_06835 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_06835 IPR005467 Histidine kinase domain CDG55_06835 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDG55_06835 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_06835 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDG55_06840 IPR001867 OmpR/PhoB-type DNA-binding domain CDG55_06840 IPR001789 Signal transduction response regulator, receiver domain CDG55_06840 IPR011006 CheY-like superfamily CDG55_06840 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_06840 IPR039420 Transcriptional regulatory protein WalR-like CDG55_06860 IPR001584 Integrase, catalytic core CDG55_06860 IPR025246 Transposase IS30-like HTH domain CDG55_06860 IPR001598 Transposase, IS30, conserved site CDG55_06860 IPR036397 Ribonuclease H superfamily CDG55_06860 IPR012337 Ribonuclease H-like superfamily CDG55_06870 IPR029062 Class I glutamine amidotransferase-like CDG55_06870 IPR017926 Glutamine amidotransferase CDG55_06870 IPR001674 GMP synthase, C-terminal CDG55_06870 IPR004739 GMP synthase, glutamine amidotransferase CDG55_06870 IPR025777 GMP synthetase ATP pyrophosphatase domain CDG55_06870 IPR022310 NAD/GMP synthase CDG55_06870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_06870 IPR022955 GMP synthase CDG55_06880 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_06880 IPR029491 Helicase Helix-turn-helix domain CDG55_06880 IPR010285 DNA helicase Pif1-like CDG55_06880 IPR003593 AAA+ ATPase domain CDG55_06890 IPR000417 Hydroxyethylthiazole kinase CDG55_06890 IPR029056 Ribokinase-like CDG55_06925 IPR027268 Peptidase M4/M1, CTD superfamily CDG55_06925 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CDG55_06925 IPR042097 Aminopeptidase N-like , N-terminal CDG55_06925 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily CDG55_06925 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily CDG55_06925 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CDG55_06925 IPR012779 Peptidase M1, alanyl aminopeptidase CDG55_06925 IPR014782 Peptidase M1, membrane alanine aminopeptidase CDG55_06925 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase CDG55_06930 IPR003018 GAF domain CDG55_06930 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_06930 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDG55_06930 IPR029016 GAF-like domain superfamily CDG55_06930 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_06935 IPR016032 Signal transduction response regulator, C-terminal effector CDG55_06935 IPR001789 Signal transduction response regulator, receiver domain CDG55_06935 IPR011006 CheY-like superfamily CDG55_06935 IPR000792 Transcription regulator LuxR, C-terminal CDG55_06940 IPR008538 Domain of unknown function DUF820 CDG55_06940 IPR011335 Restriction endonuclease type II-like CDG55_06955 IPR010432 RDD CDG55_06960 IPR003148 Regulator of K+ conductance, N-terminal CDG55_06960 IPR036291 NAD(P)-binding domain superfamily CDG55_06960 IPR038770 Sodium/solute symporter superfamily CDG55_06960 IPR004771 K+/H+ exchanger CDG55_06960 IPR006153 Cation/H+ exchanger CDG55_06965 IPR004711 Benzoate transporter CDG55_06970 IPR001123 Amino acid exporter protein, LeuE-type CDG55_06970 IPR004778 Homoserine/Threonine efflux protein CDG55_06980 IPR036390 Winged helix DNA-binding domain superfamily CDG55_06980 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_06980 IPR000847 Transcription regulator HTH, LysR CDG55_06980 IPR005119 LysR, substrate-binding CDG55_06990 IPR036101 CarD-like/TRCF domain superfamily CDG55_06990 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG55_06990 IPR011545 DEAD/DEAH box helicase domain CDG55_06990 IPR001650 Helicase, C-terminal CDG55_06990 IPR004576 Transcription-repair coupling factor CDG55_06990 IPR003711 CarD-like/TRCF domain CDG55_06990 IPR005118 Transcription-repair-coupling factor, C-terminal domain CDG55_06990 IPR041471 UvrB, interaction domain CDG55_06990 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_06990 IPR037235 TRCF-like, C-terminal domain CDG55_07000 IPR029787 Nucleotide cyclase CDG55_07000 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDG55_07010 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria CDG55_07010 IPR012675 Beta-grasp domain superfamily CDG55_07010 IPR018298 Adrenodoxin, iron-sulphur binding site CDG55_07010 IPR001055 Adrenodoxin CDG55_07010 IPR036010 2Fe-2S ferredoxin-like superfamily CDG55_07010 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDG55_07015 IPR013126 Heat shock protein 70 family CDG55_07015 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CDG55_07015 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CDG55_07015 IPR042039 HscA chaperone, nucleotide-binding domain CDG55_07015 IPR010236 ISC system FeS cluster assembly, HscA chaperone CDG55_07015 IPR018181 Heat shock protein 70, conserved site CDG55_07020 IPR001623 DnaJ domain CDG55_07020 IPR004640 Co-chaperone Hsc20 CDG55_07020 IPR036386 HscB, C-terminal domain superfamily CDG55_07020 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain CDG55_07020 IPR036869 Chaperone J-domain superfamily CDG55_07025 IPR000361 FeS cluster biogenesis CDG55_07025 IPR016092 FeS cluster insertion protein CDG55_07025 IPR017870 FeS cluster insertion, C-terminal, conserved site CDG55_07025 IPR035903 HesB-like domain superfamily CDG55_07025 IPR011302 Iron-binding protein IscA, proteobacteria CDG55_07030 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CDG55_07030 IPR011339 ISC system FeS cluster assembly, IscU scaffold CDG55_07035 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_07035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_07035 IPR016454 Cysteine desulfurase CDG55_07035 IPR010240 Cysteine desulfurase IscS CDG55_07035 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CDG55_07035 IPR000192 Aminotransferase class V domain CDG55_07035 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_07040 IPR010242 Transcription factor HTH, IscR CDG55_07040 IPR030489 Transcription regulator Rrf2-type, conserved site CDG55_07040 IPR036390 Winged helix DNA-binding domain superfamily CDG55_07040 IPR000944 Transcription regulator Rrf2-type CDG55_07040 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_07055 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CDG55_07055 IPR000119 Histone-like DNA-binding protein CDG55_07055 IPR020816 Histone-like DNA-binding protein, conserved site CDG55_07060 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CDG55_07060 IPR023059 Foldase protein PrsA CDG55_07060 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CDG55_07060 IPR027304 Trigger factor/SurA domain superfamily CDG55_07075 IPR003783 Regulatory protein RecX CDG55_07075 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_07080 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface CDG55_07080 IPR023400 DNA recombination and repair protein RecA, C-terminal CDG55_07080 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CDG55_07080 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_07080 IPR020584 DNA recombination/repair protein RecA, conserved site CDG55_07080 IPR013765 DNA recombination and repair protein RecA CDG55_07080 IPR003593 AAA+ ATPase domain CDG55_07085 IPR002942 RNA-binding S4 domain CDG55_07085 IPR025708 Heat shock protein 15 CDG55_07085 IPR036986 RNA-binding S4 domain superfamily CDG55_07090 IPR023214 HAD superfamily CDG55_07090 IPR041492 Haloacid dehalogenase-like hydrolase CDG55_07090 IPR006439 HAD hydrolase, subfamily IA CDG55_07090 IPR036412 HAD-like superfamily CDG55_07095 IPR020583 Inositol monophosphatase, metal-binding site CDG55_07095 IPR020550 Inositol monophosphatase, conserved site CDG55_07095 IPR000760 Inositol monophosphatase-like CDG55_07095 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ CDG55_07105 IPR002583 Ribosomal protein S20 CDG55_07105 IPR036510 Ribosomal protein S20 superfamily CDG55_07110 IPR016040 NAD(P)-binding domain CDG55_07110 IPR036291 NAD(P)-binding domain superfamily CDG55_07110 IPR000534 Semialdehyde dehydrogenase, NAD-binding CDG55_07115 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CDG55_07115 IPR010203 Regulator of ribonuclease activity A CDG55_07115 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CDG55_07130 IPR020613 Thiolase, conserved site CDG55_07130 IPR020617 Thiolase, C-terminal CDG55_07130 IPR020610 Thiolase, active site CDG55_07130 IPR016039 Thiolase-like CDG55_07130 IPR002155 Thiolase CDG55_07130 IPR012806 Acetyl-CoA C-acyltransferase FadI CDG55_07130 IPR020616 Thiolase, N-terminal CDG55_07135 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_07135 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDG55_07135 IPR036291 NAD(P)-binding domain superfamily CDG55_07135 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDG55_07160 IPR036390 Winged helix DNA-binding domain superfamily CDG55_07160 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_07160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_07160 IPR018541 FtsK gamma domain CDG55_07160 IPR002543 FtsK domain CDG55_07160 IPR041027 FtsK alpha domain CDG55_07160 IPR003593 AAA+ ATPase domain CDG55_07170 IPR029001 Inosine triphosphate pyrophosphatase-like CDG55_07170 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CDG55_07180 IPR001576 Phosphoglycerate kinase CDG55_07180 IPR015911 Phosphoglycerate kinase, conserved site CDG55_07180 IPR015824 Phosphoglycerate kinase, N-terminal CDG55_07180 IPR036043 Phosphoglycerate kinase superfamily CDG55_07200 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CDG55_07200 IPR036291 NAD(P)-binding domain superfamily CDG55_07200 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CDG55_07200 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDG55_07200 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CDG55_07200 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CDG55_07225 IPR005719 Dihydroorotate dehydrogenase, class 2 CDG55_07225 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CDG55_07225 IPR005720 Dihydroorotate dehydrogenase domain CDG55_07225 IPR013785 Aldolase-type TIM barrel CDG55_07225 IPR001295 Dihydroorotate dehydrogenase, conserved site CDG55_07230 IPR003825 Colicin V production, CvpA CDG55_07235 IPR029057 Phosphoribosyltransferase-like CDG55_07235 IPR005854 Amidophosphoribosyltransferase CDG55_07235 IPR000836 Phosphoribosyltransferase domain CDG55_07235 IPR029055 Nucleophile aminohydrolases, N-terminal CDG55_07235 IPR017932 Glutamine amidotransferase type 2 domain CDG55_07235 IPR035584 Amidophosphoribosyltransferase, N-terminal CDG55_07245 IPR003824 Undecaprenyl-diphosphatase UppP CDG55_07275 IPR008863 Toxic anion resistance CDG55_07290 IPR012336 Thioredoxin-like fold CDG55_07290 IPR002109 Glutaredoxin CDG55_07290 IPR012081 Alkyl hydroperoxide reductase subunit F CDG55_07290 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_07290 IPR023753 FAD/NAD(P)-binding domain CDG55_07290 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CDG55_07290 IPR036249 Thioredoxin-like superfamily CDG55_07305 IPR001451 Hexapeptide repeat CDG55_07305 IPR018357 Hexapeptide transferase, conserved site CDG55_07305 IPR005881 Serine O-acetyltransferase CDG55_07305 IPR011004 Trimeric LpxA-like superfamily CDG55_07305 IPR042122 Serine acetyltransferase, N-terminal domain superfamily CDG55_07310 IPR001537 tRNA/rRNA methyltransferase, SpoU type CDG55_07310 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG55_07310 IPR004384 RNA methyltransferase TrmJ/LasT CDG55_07310 IPR029028 Alpha/beta knot methyltransferases CDG55_07315 IPR040982 DNA polymerase III alpha subunit finger domain CDG55_07315 IPR029460 DNA polymerase, helix-hairpin-helix motif CDG55_07315 IPR004805 DNA polymerase III, alpha subunit CDG55_07315 IPR016195 Polymerase/histidinol phosphatase-like CDG55_07315 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDG55_07315 IPR004013 PHP domain CDG55_07315 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CDG55_07315 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CDG55_07315 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain CDG55_07345 IPR007197 Radical SAM CDG55_07345 IPR024177 Biotin synthase CDG55_07345 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CDG55_07345 IPR010722 Biotin and thiamin synthesis-associated domain CDG55_07345 IPR013785 Aldolase-type TIM barrel CDG55_07345 IPR006638 Elp3/MiaB/NifB CDG55_07350 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG55_07350 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG55_07350 IPR013542 Domain of unknown function DUF1730 CDG55_07350 IPR004453 Epoxyqueuosine reductase QueG CDG55_07350 IPR009051 Alpha-helical ferredoxin CDG55_07355 IPR004443 YjeF N-terminal domain CDG55_07355 IPR029056 Ribokinase-like CDG55_07355 IPR017953 Carbohydrate kinase, predicted, conserved site CDG55_07355 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase CDG55_07355 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr CDG55_07355 IPR036652 YjeF N-terminal domain superfamily CDG55_07360 IPR002176 Crossover junction endodeoxyribonuclease RuvC CDG55_07360 IPR036397 Ribonuclease H superfamily CDG55_07360 IPR012337 Ribonuclease H-like superfamily CDG55_07360 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CDG55_07375 IPR002059 Cold-shock protein, DNA-binding CDG55_07375 IPR011129 Cold shock domain CDG55_07375 IPR012156 Cold shock, CspA CDG55_07375 IPR012340 Nucleic acid-binding, OB-fold CDG55_07380 IPR012340 Nucleic acid-binding, OB-fold CDG55_07380 IPR002059 Cold-shock protein, DNA-binding CDG55_07380 IPR019844 Cold-shock (CSD) domain CDG55_07380 IPR011129 Cold shock domain CDG55_07380 IPR012156 Cold shock, CspA CDG55_07385 IPR012340 Nucleic acid-binding, OB-fold CDG55_07385 IPR002059 Cold-shock protein, DNA-binding CDG55_07385 IPR019844 Cold-shock (CSD) domain CDG55_07385 IPR011129 Cold shock domain CDG55_07385 IPR012156 Cold shock, CspA CDG55_07400 IPR038972 Inner membrane protein YiaA-like CDG55_07400 IPR008024 YiaAB two helix CDG55_07405 IPR004373 Peptide chain release factor 1 CDG55_07405 IPR000352 Peptide chain release factor class I CDG55_07405 IPR005139 Peptide chain release factor CDG55_07410 IPR025714 Methyltransferase domain CDG55_07410 IPR004556 Methyltransferase HemK-like CDG55_07410 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDG55_07410 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CDG55_07410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_07410 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CDG55_07420 IPR036291 NAD(P)-binding domain superfamily CDG55_07420 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDG55_07420 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_07430 IPR005501 LamB/YcsF/PxpA-like CDG55_07430 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDG55_07435 IPR029000 Cyclophilin-like domain superfamily CDG55_07435 IPR003778 Carboxyltransferase domain, subdomain A and B CDG55_07440 IPR000089 Biotin/lipoyl attachment CDG55_07440 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDG55_07440 IPR005481 Biotin carboxylase-like, N-terminal domain CDG55_07440 IPR011761 ATP-grasp fold CDG55_07440 IPR011053 Single hybrid motif CDG55_07440 IPR011054 Rudiment single hybrid motif CDG55_07440 IPR011764 Biotin carboxylation domain CDG55_07440 IPR001882 Biotin-binding site CDG55_07440 IPR005482 Biotin carboxylase, C-terminal CDG55_07440 IPR016185 Pre-ATP-grasp domain superfamily CDG55_07445 IPR001915 Peptidase M48 CDG55_07450 IPR018490 Cyclic nucleotide-binding-like CDG55_07450 IPR018488 Cyclic nucleotide-binding, conserved site CDG55_07450 IPR036390 Winged helix DNA-binding domain superfamily CDG55_07450 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_07450 IPR018335 Transcription regulator HTH, Crp-type, conserved site CDG55_07450 IPR014710 RmlC-like jelly roll fold CDG55_07450 IPR000595 Cyclic nucleotide-binding domain CDG55_07450 IPR012318 Crp-type HTH domain CDG55_07455 IPR036102 OsmC/Ohr superfamily CDG55_07455 IPR003718 OsmC/Ohr family CDG55_07455 IPR015946 K homology domain-like, alpha/beta CDG55_07465 IPR003593 AAA+ ATPase domain CDG55_07465 IPR003959 ATPase, AAA-type, core CDG55_07465 IPR041546 ClpA/ClpB, AAA lid domain CDG55_07465 IPR019489 Clp ATPase, C-terminal CDG55_07465 IPR036628 Clp, N-terminal domain superfamily CDG55_07465 IPR028299 ClpA/B, conserved site 2 CDG55_07465 IPR018368 ClpA/B, conserved site 1 CDG55_07465 IPR001270 ClpA/B family CDG55_07465 IPR004176 Clp, N-terminal CDG55_07465 IPR017730 Chaperonin ClpB CDG55_07465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_07475 IPR004114 THUMP domain CDG55_07475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_07475 IPR017244 Ribosomal RNA large subunit methyltransferase K/L CDG55_07475 IPR019614 S-adenosylmethionine-dependent methyltransferase CDG55_07475 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDG55_07475 IPR000241 Putative RNA methylase domain CDG55_07485 IPR006130 Aspartate/ornithine carbamoyltransferase CDG55_07485 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CDG55_07485 IPR002082 Aspartate carbamoyltransferase CDG55_07485 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CDG55_07485 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CDG55_07490 IPR032466 Metal-dependent hydrolase CDG55_07490 IPR006680 Amidohydrolase-related CDG55_07490 IPR004722 Dihydroorotase CDG55_07490 IPR011059 Metal-dependent hydrolase, composite domain superfamily CDG55_07505 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CDG55_07505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_07515 IPR004045 Glutathione S-transferase, N-terminal CDG55_07515 IPR004046 Glutathione S-transferase, C-terminal CDG55_07515 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG55_07515 IPR010987 Glutathione S-transferase, C-terminal-like CDG55_07515 IPR036249 Thioredoxin-like superfamily CDG55_07525 IPR012081 Alkyl hydroperoxide reductase subunit F CDG55_07525 IPR036249 Thioredoxin-like superfamily CDG55_07525 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CDG55_07525 IPR012336 Thioredoxin-like fold CDG55_07525 IPR002109 Glutaredoxin CDG55_07525 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_07525 IPR023753 FAD/NAD(P)-binding domain CDG55_07540 IPR020449 Transcription regulator HTH, AraC- type CDG55_07540 IPR009057 Homeobox-like domain superfamily CDG55_07540 IPR013096 Cupin 2, conserved barrel CDG55_07540 IPR014710 RmlC-like jelly roll fold CDG55_07540 IPR011051 RmlC-like cupin domain superfamily CDG55_07540 IPR018060 DNA binding HTH domain, AraC-type CDG55_07540 IPR018062 HTH domain AraC-type, conserved site CDG55_07545 IPR005804 Fatty acid desaturase domain CDG55_07545 IPR033885 Alkane/xylene monooxygenase CDG55_07555 IPR013766 Thioredoxin domain CDG55_07555 IPR036249 Thioredoxin-like superfamily CDG55_07555 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDG55_07555 IPR024706 Peroxiredoxin, AhpC-type CDG55_07555 IPR019479 Peroxiredoxin, C-terminal CDG55_07555 IPR017559 Alkyl hydroperoxide reductase subunit C CDG55_07560 IPR024590 RNA helicase HrpA, C-terminal CDG55_07560 IPR003593 AAA+ ATPase domain CDG55_07560 IPR010222 RNA helicase HrpA CDG55_07560 IPR001650 Helicase, C-terminal CDG55_07560 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG55_07560 IPR011545 DEAD/DEAH box helicase domain CDG55_07560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_07560 IPR007502 Helicase-associated domain CDG55_07560 IPR011709 Domain of unknown function DUF1605 CDG55_07565 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CDG55_07565 IPR016039 Thiolase-like CDG55_07565 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CDG55_07565 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDG55_07575 IPR007197 Radical SAM CDG55_07575 IPR013785 Aldolase-type TIM barrel CDG55_07575 IPR003698 Lipoyl synthase CDG55_07575 IPR006638 Elp3/MiaB/NifB CDG55_07580 IPR022962 Soluble pyridine nucleotide transhydrogenase CDG55_07580 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDG55_07580 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CDG55_07580 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CDG55_07580 IPR023753 FAD/NAD(P)-binding domain CDG55_07580 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_07595 IPR012997 Rare lipoprotein A CDG55_07595 IPR036908 RlpA-like domain superfamily CDG55_07595 IPR009009 RlpA-like protein, double-psi beta-barrel domain CDG55_07595 IPR034718 Endolytic peptidoglycan transglycosylase RlpA CDG55_07595 IPR007730 Sporulation-like domain CDG55_07600 IPR031304 Transglycosylase SLT domain 2 CDG55_07600 IPR011757 Lytic transglycosylase MltB CDG55_07600 IPR023346 Lysozyme-like domain superfamily CDG55_07605 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB CDG55_07605 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CDG55_07605 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CDG55_07615 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal CDG55_07615 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CDG55_07615 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 CDG55_07620 IPR000412 ABC-2 transporter CDG55_07620 IPR013525 ABC-2 type transporter CDG55_07625 IPR003439 ABC transporter-like CDG55_07625 IPR017871 ABC transporter, conserved site CDG55_07625 IPR003593 AAA+ ATPase domain CDG55_07625 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_07650 IPR001085 Serine hydroxymethyltransferase CDG55_07650 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_07650 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_07650 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_07650 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CDG55_07650 IPR039429 Serine hydroxymethyltransferase-like domain CDG55_07660 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG55_07660 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG55_07695 IPR022631 S-adenosylmethionine synthetase, conserved site CDG55_07695 IPR022630 S-adenosylmethionine synthetase, C-terminal CDG55_07695 IPR022629 S-adenosylmethionine synthetase, central domain CDG55_07695 IPR022628 S-adenosylmethionine synthetase, N-terminal CDG55_07695 IPR002133 S-adenosylmethionine synthetase CDG55_07695 IPR022636 S-adenosylmethionine synthetase superfamily CDG55_07700 IPR029061 Thiamin diphosphate-binding fold CDG55_07700 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CDG55_07700 IPR005475 Transketolase-like, pyrimidine-binding domain CDG55_07700 IPR005478 Transketolase, bacterial-like CDG55_07700 IPR020826 Transketolase binding site CDG55_07700 IPR005474 Transketolase, N-terminal CDG55_07700 IPR033248 Transketolase, C-terminal domain CDG55_07700 IPR033247 Transketolase family CDG55_07725 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDG55_07725 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDG55_07725 IPR023480 Uncharacterised protein family UPF0312/YceI CDG55_07740 IPR018711 Phosphodiester glycosidase CDG55_07750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_07750 IPR030390 RNA methyltransferase TrmA, active site CDG55_07750 IPR010280 (Uracil-5)-methyltransferase family CDG55_07750 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA CDG55_07755 IPR015590 Aldehyde dehydrogenase domain CDG55_07755 IPR016163 Aldehyde dehydrogenase, C-terminal CDG55_07755 IPR013321 Arc-type ribbon-helix-helix CDG55_07755 IPR025703 Bifunctional protein PutA CDG55_07755 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 CDG55_07755 IPR029041 FAD-linked oxidoreductase-like CDG55_07755 IPR016162 Aldehyde dehydrogenase, N-terminal CDG55_07755 IPR024090 Proline dehydrogenase PutA, domain I CDG55_07755 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain CDG55_07755 IPR024082 Proline dehydrogenase PutA, domain II CDG55_07755 IPR002872 Proline dehydrogenase domain CDG55_07755 IPR010985 Ribbon-helix-helix CDG55_07755 IPR016161 Aldehyde/histidinol dehydrogenase CDG55_07755 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDG55_07755 IPR016160 Aldehyde dehydrogenase, cysteine active site CDG55_07755 IPR024089 Proline dehydrogenase PutA, domain I/II CDG55_07760 IPR019888 Transcription regulator AsnC-type CDG55_07760 IPR011008 Dimeric alpha-beta barrel CDG55_07760 IPR000485 AsnC-type HTH domain CDG55_07760 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG55_07760 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDG55_07760 IPR036390 Winged helix DNA-binding domain superfamily CDG55_07760 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_07760 IPR011991 ArsR-like helix-turn-helix domain CDG55_07765 IPR011851 Sodium/proline symporter CDG55_07765 IPR001734 Sodium/solute symporter CDG55_07765 IPR018212 Sodium/solute symporter, conserved site CDG55_07765 IPR038377 Sodium/glucose symporter superfamily CDG55_07770 IPR022761 Fumarate lyase, N-terminal CDG55_07770 IPR020557 Fumarate lyase, conserved site CDG55_07770 IPR008948 L-Aspartase-like CDG55_07770 IPR000362 Fumarate lyase family CDG55_07770 IPR018951 Fumarase C, C-terminal CDG55_07770 IPR024083 Fumarase/histidase, N-terminal CDG55_07770 IPR004708 Aspartate ammonia-lyase CDG55_07775 IPR011053 Single hybrid motif CDG55_07775 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDG55_07775 IPR002930 Glycine cleavage system H-protein CDG55_07775 IPR033753 Glycine cleavage system H-protein/Simiate CDG55_07775 IPR017453 Glycine cleavage system H-protein, subgroup CDG55_07775 IPR000089 Biotin/lipoyl attachment CDG55_07780 IPR018060 DNA binding HTH domain, AraC-type CDG55_07780 IPR009057 Homeobox-like domain superfamily CDG55_07780 IPR020449 Transcription regulator HTH, AraC- type CDG55_07780 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG55_07790 IPR003593 AAA+ ATPase domain CDG55_07790 IPR039421 Type I protein exporter CDG55_07790 IPR036640 ABC transporter type 1, transmembrane domain superfamily CDG55_07790 IPR011527 ABC transporter type 1, transmembrane domain CDG55_07790 IPR017871 ABC transporter, conserved site CDG55_07790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_07790 IPR003439 ABC transporter-like CDG55_07810 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CDG55_07810 IPR017927 FAD-binding domain, ferredoxin reductase-type CDG55_07810 IPR033892 Ferredoxin--NADP reductase, bacteria CDG55_07810 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG55_07810 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDG55_07810 IPR017938 Riboflavin synthase-like beta-barrel CDG55_07810 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDG55_07815 IPR036413 YaeB-like superfamily CDG55_07815 IPR040372 YaeB-like CDG55_07815 IPR023368 Uncharacterised protein family UPF0066, conserved site CDG55_07815 IPR041369 TrmO, C-terminal CDG55_07815 IPR023370 TrmO-like, N-terminal domain CDG55_07815 IPR036414 YaeB, N-terminal domain superfamily CDG55_07825 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_07825 IPR042181 Type II secretion system, protein E, N-terminal CDG55_07825 IPR037257 General secretory system II, protein E, N-terminal superfamily CDG55_07825 IPR001482 Type II/IV secretion system protein CDG55_07825 IPR003593 AAA+ ATPase domain CDG55_07825 IPR013369 Type II secretion system GspE CDG55_07835 IPR003561 Mutator MutT CDG55_07835 IPR015797 NUDIX hydrolase-like domain superfamily CDG55_07835 IPR020476 NUDIX hydrolase CDG55_07835 IPR020084 NUDIX hydrolase, conserved site CDG55_07835 IPR000086 NUDIX hydrolase domain CDG55_07845 IPR023346 Lysozyme-like domain superfamily CDG55_07845 IPR036950 Penicillin binding protein transglycosylase domain CDG55_07845 IPR001460 Penicillin-binding protein, transpeptidase CDG55_07845 IPR011813 Penicillin-binding protein 1B CDG55_07845 IPR001264 Glycosyl transferase, family 51 CDG55_07845 IPR028166 Bifunctional transglycosylase second domain CDG55_07845 IPR012338 Beta-lactamase/transpeptidase-like CDG55_07855 IPR002504 NAD kinase CDG55_07855 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CDG55_07855 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal CDG55_07855 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CDG55_07860 IPR009749 Protein of unknown function DUF1315 CDG55_07865 IPR005940 Anthranilate phosphoribosyl transferase CDG55_07865 IPR000312 Glycosyl transferase, family 3 CDG55_07865 IPR017459 Glycosyl transferase family 3, N-terminal domain CDG55_07865 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CDG55_07865 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CDG55_07870 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDG55_07870 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDG55_07870 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDG55_07870 IPR006089 Acyl-CoA dehydrogenase, conserved site CDG55_07870 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDG55_07870 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDG55_07870 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDG55_07880 IPR018528 Prephenate dehydratase, conserved site CDG55_07880 IPR001086 Prephenate dehydratase CDG55_07880 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain CDG55_07880 IPR002701 Chorismate mutase II, prokaryotic-type CDG55_07880 IPR036979 Chorismate mutase domain superfamily CDG55_07880 IPR036263 Chorismate mutase type II superfamily CDG55_07880 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CDG55_07880 IPR002912 ACT domain CDG55_07885 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CDG55_07885 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CDG55_07885 IPR001986 Enolpyruvate transferase domain CDG55_07885 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CDG55_07885 IPR036968 Enolpyruvate transferase domain superfamily CDG55_07895 IPR002933 Peptidase M20 CDG55_07895 IPR011650 Peptidase M20, dimerisation domain CDG55_07895 IPR001160 Peptidase M20C, Xaa-His dipeptidase CDG55_07920 IPR005583 Peroxide stress protein YaaA CDG55_07935 IPR001845 HTH ArsR-type DNA-binding domain CDG55_07935 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_07935 IPR036390 Winged helix DNA-binding domain superfamily CDG55_07935 IPR011991 ArsR-like helix-turn-helix domain CDG55_07950 IPR036390 Winged helix DNA-binding domain superfamily CDG55_07950 IPR000847 Transcription regulator HTH, LysR CDG55_07950 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain CDG55_07950 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_07950 IPR005119 LysR, substrate-binding CDG55_07960 IPR030192 Miniconductance mechanosensitive channel YbdG CDG55_07960 IPR011066 Mechanosensitive ion channel MscS, C-terminal CDG55_07960 IPR006685 Mechanosensitive ion channel MscS CDG55_07960 IPR010920 LSM domain superfamily CDG55_07965 IPR018636 Protein of unknown function DUF2058 CDG55_07975 IPR001991 Sodium:dicarboxylate symporter CDG55_07975 IPR036458 Sodium:dicarboxylate symporter superfamily CDG55_07975 IPR023025 Serine/threonine transporter SstT CDG55_07980 IPR008867 Thiazole synthase CDG55_07980 IPR013785 Aldolase-type TIM barrel CDG55_07980 IPR033983 Thiazole synthase ThiG CDG55_07990 IPR006696 Protein of unknown function DUF423 CDG55_07995 IPR013325 RNA polymerase sigma factor, region 2 CDG55_07995 IPR014284 RNA polymerase sigma-70 like domain CDG55_07995 IPR000943 RNA polymerase sigma-70 CDG55_07995 IPR009042 RNA polymerase sigma-70 region 1.2 CDG55_07995 IPR007630 RNA polymerase sigma-70 region 4 CDG55_07995 IPR013324 RNA polymerase sigma factor, region 3/4-like CDG55_07995 IPR007627 RNA polymerase sigma-70 region 2 CDG55_07995 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria CDG55_08005 IPR012156 Cold shock, CspA CDG55_08005 IPR011129 Cold shock domain CDG55_08005 IPR019844 Cold-shock (CSD) domain CDG55_08005 IPR002059 Cold-shock protein, DNA-binding CDG55_08005 IPR012340 Nucleic acid-binding, OB-fold CDG55_08010 IPR014014 RNA helicase, DEAD-box type, Q motif CDG55_08010 IPR001650 Helicase, C-terminal CDG55_08010 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDG55_08010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_08010 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG55_08010 IPR011545 DEAD/DEAH box helicase domain CDG55_08010 IPR023554 ATP-dependent RNA helicase RhlB type CDG55_08015 IPR013785 Aldolase-type TIM barrel CDG55_08015 IPR000771 Fructose-bisphosphate aldolase, class-II CDG55_08015 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype CDG55_08020 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CDG55_08020 IPR023034 Peptidyl-prolyl isomerase SurA CDG55_08020 IPR015391 SurA N-terminal CDG55_08020 IPR027304 Trigger factor/SurA domain superfamily CDG55_08025 IPR005653 Organic solvent tolerance-like, N-terminal CDG55_08025 IPR020889 LPS-assembly protein LptD CDG55_08025 IPR007543 LptD, C-terminal CDG55_08030 IPR002575 Aminoglycoside phosphotransferase CDG55_08030 IPR011009 Protein kinase-like domain superfamily CDG55_08035 IPR029044 Nucleotide-diphospho-sugar transferases CDG55_08035 IPR005835 Nucleotidyl transferase domain CDG55_08040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_08040 IPR003682 rRNA small subunit methyltransferase G CDG55_08045 IPR025669 AAA domain CDG55_08045 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_08050 IPR004437 ParB/RepB/Spo0J partition protein CDG55_08050 IPR036086 ParB/Sulfiredoxin superfamily CDG55_08050 IPR003115 ParB/Sulfiredoxin CDG55_08050 IPR041468 ParB/Spo0J, HTH domain CDG55_08055 IPR002898 MotA/TolQ/ExbB proton channel CDG55_08065 IPR011917 ABC transporter, lipid A export, MsbA CDG55_08065 IPR039421 Type I protein exporter CDG55_08065 IPR003439 ABC transporter-like CDG55_08065 IPR036640 ABC transporter type 1, transmembrane domain superfamily CDG55_08065 IPR011527 ABC transporter type 1, transmembrane domain CDG55_08065 IPR003593 AAA+ ATPase domain CDG55_08065 IPR017871 ABC transporter, conserved site CDG55_08065 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_08070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_08070 IPR003758 Tetraacyldisaccharide 4'-kinase CDG55_08075 IPR003329 Acylneuraminate cytidylyltransferase CDG55_08075 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase CDG55_08075 IPR029044 Nucleotide-diphospho-sugar transferases CDG55_08080 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_08080 IPR015199 DNA polymerase III, delta subunit, C-terminal CDG55_08080 IPR004622 DNA polymerase III, delta prime subunit CDG55_08090 IPR032466 Metal-dependent hydrolase CDG55_08090 IPR015991 Uncharacterised hydrolase TatD-type CDG55_08090 IPR018228 Deoxyribonuclease, TatD-related, conserved site CDG55_08090 IPR001130 TatD family CDG55_08105 IPR003413 Type II secretion system protein I domain CDG55_08105 IPR010052 Type II secretion system protein I CDG55_08105 IPR012902 Prokaryotic N-terminal methylation site CDG55_08110 IPR010055 Type II secretion system protein J CDG55_08110 IPR012902 Prokaryotic N-terminal methylation site CDG55_08115 IPR005628 General secretion pathway protein K CDG55_08115 IPR038072 GspK, central domain superfamily CDG55_08125 IPR036895 Uracil-DNA glycosylase-like domain superfamily CDG55_08125 IPR005122 Uracil-DNA glycosylase-like CDG55_08125 IPR018085 Uracil-DNA glycosylase, active site CDG55_08125 IPR002043 Uracil-DNA glycosylase family 1 CDG55_08135 IPR028883 tRNA-specific adenosine deaminase CDG55_08135 IPR016193 Cytidine deaminase-like CDG55_08135 IPR002125 Cytidine and deoxycytidylate deaminase domain CDG55_08135 IPR016192 APOBEC/CMP deaminase, zinc-binding CDG55_08145 IPR003136 Cytidylate kinase CDG55_08145 IPR011994 Cytidylate kinase domain CDG55_08145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_08150 IPR022967 RNA-binding domain, S1 CDG55_08150 IPR000110 Ribosomal protein S1 CDG55_08150 IPR003029 S1 domain CDG55_08150 IPR012340 Nucleic acid-binding, OB-fold CDG55_08155 IPR000119 Histone-like DNA-binding protein CDG55_08155 IPR020816 Histone-like DNA-binding protein, conserved site CDG55_08155 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CDG55_08155 IPR005685 Integration host factor, beta subunit CDG55_08170 IPR011060 Ribulose-phosphate binding barrel CDG55_08170 IPR001754 Orotidine 5'-phosphate decarboxylase domain CDG55_08170 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CDG55_08170 IPR014732 Orotidine 5'-phosphate decarboxylase CDG55_08170 IPR013785 Aldolase-type TIM barrel CDG55_08175 IPR005642 Lysine exporter LysO CDG55_08180 IPR020946 Flavin monooxygenase-like CDG55_08180 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_08190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_08190 IPR030870 Cell division protein ZapE CDG55_08190 IPR005654 ATPase, AFG1-like CDG55_08195 IPR001465 Malate synthase CDG55_08195 IPR023310 Malate synthase G, beta sub-domain CDG55_08195 IPR011076 Malate synthase-like superfamily CDG55_08195 IPR006253 Malate synthase G CDG55_08225 IPR004685 Branched-chain amino acid transport system II carrier protein CDG55_08230 IPR001714 Peptidase M24, methionine aminopeptidase CDG55_08230 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CDG55_08230 IPR036005 Creatinase/aminopeptidase-like CDG55_08230 IPR000994 Peptidase M24 CDG55_08235 IPR000847 Transcription regulator HTH, LysR CDG55_08235 IPR036390 Winged helix DNA-binding domain superfamily CDG55_08235 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_08235 IPR005119 LysR, substrate-binding CDG55_08240 IPR002912 ACT domain CDG55_08240 IPR012676 TGS-like CDG55_08240 IPR004095 TGS CDG55_08240 IPR007685 RelA/SpoT CDG55_08240 IPR004811 RelA/SpoT family CDG55_08240 IPR003607 HD/PDEase domain CDG55_08240 IPR012675 Beta-grasp domain superfamily CDG55_08240 IPR033655 RelA, TGS domain CDG55_08250 IPR002109 Glutaredoxin CDG55_08250 IPR036249 Thioredoxin-like superfamily CDG55_08250 IPR004480 Monothiol glutaredoxin-related CDG55_08250 IPR033658 Glutaredoxin, PICOT-like CDG55_08250 IPR014434 Monothiol glutaredoxin CDG55_08255 IPR005814 Aminotransferase class-III CDG55_08255 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_08255 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_08255 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_08255 IPR004636 Acetylornithine/Succinylornithine transaminase family CDG55_08260 IPR000644 CBS domain CDG55_08260 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CDG55_08260 IPR001347 Sugar isomerase (SIS) CDG55_08260 IPR035474 KpsF-like, SIS domain CDG55_08285 IPR013822 Signal recognition particle SRP54, helical bundle CDG55_08285 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CDG55_08285 IPR003593 AAA+ ATPase domain CDG55_08285 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_08285 IPR036225 SRP/SRP receptor, N-terminal CDG55_08285 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CDG55_08285 IPR004390 Signal-recognition particle receptor FtsY CDG55_08310 IPR011724 Cyd operon protein YbgT CDG55_08310 IPR012994 Membrane bound YbgT-like CDG55_08315 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CDG55_08320 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CDG55_08340 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CDG55_08340 IPR011611 Carbohydrate kinase PfkB CDG55_08340 IPR029056 Ribokinase-like CDG55_08345 IPR013578 Peptidase M16C associated CDG55_08345 IPR007863 Peptidase M16, C-terminal CDG55_08345 IPR011765 Peptidase M16, N-terminal CDG55_08345 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CDG55_08350 IPR003187 Phospholipase A1 CDG55_08350 IPR036541 Phospholipase A1 superfamily CDG55_08385 IPR004772 TrkH potassium transport family CDG55_08385 IPR003445 Cation transporter CDG55_08390 IPR003148 Regulator of K+ conductance, N-terminal CDG55_08390 IPR036291 NAD(P)-binding domain superfamily CDG55_08390 IPR006037 Regulator of K+ conductance, C-terminal CDG55_08390 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CDG55_08395 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CDG55_08395 IPR038110 Threonine dehydratase, ACT-like domain superfamily CDG55_08395 IPR005787 Threonine dehydratase, biosynthetic CDG55_08395 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG55_08395 IPR001721 Threonine dehydratase, ACT-like domain CDG55_08395 IPR001926 Pyridoxal-phosphate dependent enzyme CDG55_08400 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup CDG55_08400 IPR004788 Ribose 5-phosphate isomerase, type A CDG55_08400 IPR037171 NagB/RpiA transferase-like CDG55_08415 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CDG55_08415 IPR000534 Semialdehyde dehydrogenase, NAD-binding CDG55_08415 IPR036291 NAD(P)-binding domain superfamily CDG55_08415 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 CDG55_08415 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site CDG55_08425 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CDG55_08425 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDG55_08425 IPR003769 Adaptor protein ClpS, core CDG55_08435 IPR036628 Clp, N-terminal domain superfamily CDG55_08435 IPR003593 AAA+ ATPase domain CDG55_08435 IPR003959 ATPase, AAA-type, core CDG55_08435 IPR019489 Clp ATPase, C-terminal CDG55_08435 IPR041546 ClpA/ClpB, AAA lid domain CDG55_08435 IPR028299 ClpA/B, conserved site 2 CDG55_08435 IPR018368 ClpA/B, conserved site 1 CDG55_08435 IPR001270 ClpA/B family CDG55_08435 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA CDG55_08435 IPR004176 Clp, N-terminal CDG55_08435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_08440 IPR003844 Uncharacterised protein family UPF0060 CDG55_08445 IPR013785 Aldolase-type TIM barrel CDG55_08445 IPR006219 DHAP synthase, class 1 CDG55_08445 IPR006218 DAHP synthetase I/KDSA CDG55_08450 IPR029058 Alpha/Beta hydrolase fold CDG55_08450 IPR000073 Alpha/beta hydrolase fold-1 CDG55_08460 IPR013785 Aldolase-type TIM barrel CDG55_08460 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_08460 IPR023753 FAD/NAD(P)-binding domain CDG55_08460 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDG55_08485 IPR029062 Class I glutamine amidotransferase-like CDG55_08485 IPR004468 CTP synthase CDG55_08485 IPR017926 Glutamine amidotransferase CDG55_08485 IPR033828 CTP synthase GATase domain CDG55_08485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_08485 IPR017456 CTP synthase, N-terminal CDG55_08490 IPR006218 DAHP synthetase I/KDSA CDG55_08490 IPR013785 Aldolase-type TIM barrel CDG55_08490 IPR006269 3-deoxy-8-phosphooctulonate synthase CDG55_08495 IPR036849 Enolase-like, C-terminal domain superfamily CDG55_08495 IPR020809 Enolase, conserved site CDG55_08495 IPR020810 Enolase, C-terminal TIM barrel domain CDG55_08495 IPR029017 Enolase-like, N-terminal CDG55_08495 IPR000941 Enolase CDG55_08495 IPR020811 Enolase, N-terminal CDG55_08500 IPR007060 Septum formation initiator FtsL/DivIC CDG55_08500 IPR023081 Cell division protein FtsB CDG55_08505 IPR034683 Cytidylyltransferase IspD/TarI CDG55_08505 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CDG55_08505 IPR029044 Nucleotide-diphospho-sugar transferases CDG55_08505 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CDG55_08515 IPR007272 Sulphur transport domain CDG55_08525 IPR001279 Metallo-beta-lactamase CDG55_08525 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG55_08545 IPR023631 Amidase signature domain CDG55_08545 IPR014085 Allophanate hydrolase CDG55_08545 IPR036928 Amidase signature (AS) superfamily CDG55_08550 IPR001882 Biotin-binding site CDG55_08550 IPR011764 Biotin carboxylation domain CDG55_08550 IPR005482 Biotin carboxylase, C-terminal CDG55_08550 IPR000089 Biotin/lipoyl attachment CDG55_08550 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDG55_08550 IPR016185 Pre-ATP-grasp domain superfamily CDG55_08550 IPR011054 Rudiment single hybrid motif CDG55_08550 IPR011053 Single hybrid motif CDG55_08550 IPR011761 ATP-grasp fold CDG55_08550 IPR005481 Biotin carboxylase-like, N-terminal domain CDG55_08555 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_08555 IPR036390 Winged helix DNA-binding domain superfamily CDG55_08555 IPR000524 Transcription regulator HTH, GntR CDG55_08555 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG55_08555 IPR011711 GntR, C-terminal CDG55_08555 IPR000485 AsnC-type HTH domain CDG55_08560 IPR003776 YcaO-like domain CDG55_08560 IPR041080 YcaO cyclodehydratase, C-terminal CDG55_08580 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal CDG55_08580 IPR006276 Cobalamin-independent methionine synthase CDG55_08580 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CDG55_08580 IPR038071 UROD/MetE-like superfamily CDG55_08585 IPR002563 Flavin reductase like domain CDG55_08585 IPR012349 FMN-binding split barrel CDG55_08585 IPR019917 FMN reductase (NADH) RutF CDG55_08590 IPR002781 Transmembrane protein TauE-like CDG55_08605 IPR036397 Ribonuclease H superfamily CDG55_08605 IPR012337 Ribonuclease H-like superfamily CDG55_08605 IPR001584 Integrase, catalytic core CDG55_08605 IPR009057 Homeobox-like domain superfamily CDG55_08625 IPR000160 GGDEF domain CDG55_08625 IPR029787 Nucleotide cyclase CDG55_08630 IPR020541 Chorismate synthase, conserved site CDG55_08630 IPR035904 Chorismate synthase AroC superfamily CDG55_08630 IPR000453 Chorismate synthase CDG55_08635 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase CDG55_08635 IPR007848 Methyltransferase small domain CDG55_08635 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDG55_08635 IPR004556 Methyltransferase HemK-like CDG55_08635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_08645 IPR000642 Peptidase M41 CDG55_08645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_08645 IPR005936 Peptidase, FtsH CDG55_08645 IPR003959 ATPase, AAA-type, core CDG55_08645 IPR003593 AAA+ ATPase domain CDG55_08645 IPR037219 Peptidase M41-like CDG55_08645 IPR041569 AAA ATPase, AAA+ lid domain CDG55_08655 IPR038068 YcgL-like superfamily CDG55_08655 IPR027354 YcgL domain CDG55_08660 IPR002562 3'-5' exonuclease domain CDG55_08660 IPR010997 HRDC-like superfamily CDG55_08660 IPR002121 HRDC domain CDG55_08660 IPR006292 Ribonuclease D CDG55_08660 IPR012337 Ribonuclease H-like superfamily CDG55_08660 IPR036397 Ribonuclease H superfamily CDG55_08665 IPR023628 Recombination protein RecR, C4-type zinc finger CDG55_08665 IPR000093 DNA recombination protein RecR CDG55_08665 IPR023627 Recombination protein RecR CDG55_08665 IPR034137 RecR, TOPRIM domain CDG55_08665 IPR015967 Recombination protein RecR, conserved site CDG55_08665 IPR006171 TOPRIM domain CDG55_08670 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CDG55_08670 IPR004401 Nucleoid-associated protein YbaB/EbfC family CDG55_08675 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CDG55_08675 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_08675 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_08675 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_08675 IPR006234 O-succinylhomoserine sulfhydrylase CDG55_08685 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CDG55_08685 IPR036291 NAD(P)-binding domain superfamily CDG55_08685 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CDG55_08685 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CDG55_08685 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDG55_08685 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CDG55_08685 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CDG55_08695 IPR011146 HIT-like domain CDG55_08695 IPR019808 Histidine triad, conserved site CDG55_08695 IPR039384 HINT family CDG55_08695 IPR001310 Histidine triad (HIT) protein CDG55_08695 IPR036265 HIT-like superfamily CDG55_08720 IPR003835 Glycosyl transferase, family 19 CDG55_08750 IPR002781 Transmembrane protein TauE-like CDG55_08755 IPR006219 DHAP synthase, class 1 CDG55_08755 IPR006218 DAHP synthetase I/KDSA CDG55_08755 IPR013785 Aldolase-type TIM barrel CDG55_08765 IPR012910 TonB-dependent receptor, plug domain CDG55_08765 IPR037066 TonB-dependent receptor, plug domain superfamily CDG55_08765 IPR000531 TonB-dependent receptor-like, beta-barrel CDG55_08765 IPR010917 TonB-dependent receptor, conserved site CDG55_08765 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG55_08765 IPR039426 Vitamin B12 transporter BtuB-like CDG55_08765 IPR010916 TonB box, conserved site CDG55_08775 IPR003805 Adenosylcobinamide-GDP ribazoletransferase CDG55_08785 IPR029033 Histidine phosphatase superfamily CDG55_08785 IPR013078 Histidine phosphatase superfamily, clade-1 CDG55_08790 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic CDG55_08790 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like CDG55_08790 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily CDG55_08790 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal CDG55_08795 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_08795 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase CDG55_08805 IPR006439 HAD hydrolase, subfamily IA CDG55_08805 IPR041492 Haloacid dehalogenase-like hydrolase CDG55_08805 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG55_08805 IPR010976 Beta-phosphoglucomutase hydrolase CDG55_08805 IPR023214 HAD superfamily CDG55_08805 IPR036412 HAD-like superfamily CDG55_08815 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG55_08815 IPR000531 TonB-dependent receptor-like, beta-barrel CDG55_08815 IPR037066 TonB-dependent receptor, plug domain superfamily CDG55_08815 IPR012910 TonB-dependent receptor, plug domain CDG55_08815 IPR039426 Vitamin B12 transporter BtuB-like CDG55_08815 IPR010105 TonB-dependent siderophore receptor CDG55_08820 IPR036259 MFS transporter superfamily CDG55_08820 IPR011701 Major facilitator superfamily CDG55_08820 IPR020846 Major facilitator superfamily domain CDG55_08820 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 CDG55_08835 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CDG55_08835 IPR022770 Ferric iron reductase FhuF domain CDG55_08835 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like CDG55_08840 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase CDG55_08840 IPR031043 Putative histamine N-monooxygenase CDG55_08840 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_08845 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like CDG55_08845 IPR022770 Ferric iron reductase FhuF domain CDG55_08845 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CDG55_08850 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CDG55_08850 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CDG55_08850 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CDG55_08860 IPR004147 UbiB domain CDG55_08860 IPR011009 Protein kinase-like domain superfamily CDG55_08865 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDG55_08865 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDG55_08865 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDG55_08865 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDG55_08865 IPR006089 Acyl-CoA dehydrogenase, conserved site CDG55_08865 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDG55_08865 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDG55_08870 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDG55_08870 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDG55_08870 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDG55_08870 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDG55_08870 IPR006089 Acyl-CoA dehydrogenase, conserved site CDG55_08870 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDG55_08870 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDG55_08875 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CDG55_08875 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CDG55_08875 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CDG55_08875 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDG55_08875 IPR006322 Glutathione reductase, eukaryote/bacterial CDG55_08875 IPR023753 FAD/NAD(P)-binding domain CDG55_08875 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_08880 IPR033885 Alkane/xylene monooxygenase CDG55_08880 IPR005804 Fatty acid desaturase domain CDG55_08885 IPR020449 Transcription regulator HTH, AraC- type CDG55_08885 IPR011051 RmlC-like cupin domain superfamily CDG55_08885 IPR009057 Homeobox-like domain superfamily CDG55_08885 IPR018060 DNA binding HTH domain, AraC-type CDG55_08885 IPR018062 HTH domain AraC-type, conserved site CDG55_08885 IPR014710 RmlC-like jelly roll fold CDG55_08885 IPR032783 AraC-type transcription regulator, ligand-binding domain CDG55_08890 IPR018357 Hexapeptide transferase, conserved site CDG55_08890 IPR001451 Hexapeptide repeat CDG55_08890 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily CDG55_08890 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal CDG55_08890 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CDG55_08890 IPR011004 Trimeric LpxA-like superfamily CDG55_08895 IPR029069 HotDog domain superfamily CDG55_08895 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CDG55_08895 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CDG55_08900 IPR001451 Hexapeptide repeat CDG55_08900 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD CDG55_08900 IPR011004 Trimeric LpxA-like superfamily CDG55_08900 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region CDG55_08910 IPR000184 Bacterial surface antigen (D15) CDG55_08910 IPR034746 POTRA domain CDG55_08910 IPR023707 Outer membrane protein assembly factor BamA CDG55_08910 IPR039910 Surface antigen D15-like CDG55_08910 IPR010827 POTRA domain, BamA/TamA-like CDG55_08930 IPR036291 NAD(P)-binding domain superfamily CDG55_08930 IPR036169 DXP reductoisomerase, C-terminal domain superfamily CDG55_08930 IPR026877 DXP reductoisomerase C-terminal domain CDG55_08930 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CDG55_08930 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CDG55_08930 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CDG55_08935 IPR000374 Phosphatidate cytidylyltransferase CDG55_08940 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CDG55_08940 IPR001441 Decaprenyl diphosphate synthase-like CDG55_08940 IPR036424 Decaprenyl diphosphate synthase-like superfamily CDG55_08945 IPR036191 RRF superfamily CDG55_08945 IPR002661 Ribosome recycling factor CDG55_08945 IPR023584 Ribosome recycling factor domain CDG55_08950 IPR011817 Uridylate kinase CDG55_08950 IPR015963 Uridylate kinase, bacteria CDG55_08950 IPR001048 Aspartate/glutamate/uridylate kinase CDG55_08950 IPR036393 Acetylglutamate kinase-like superfamily CDG55_08955 IPR007197 Radical SAM CDG55_08955 IPR041582 RimO, TRAM domain CDG55_08955 IPR005840 Ribosomal protein S12 methylthiotransferase RimO CDG55_08955 IPR038135 Methylthiotransferase, N-terminal domain superfamily CDG55_08955 IPR013848 Methylthiotransferase, N-terminal CDG55_08955 IPR020612 Methylthiotransferase, conserved site CDG55_08955 IPR005839 Methylthiotransferase CDG55_08955 IPR006638 Elp3/MiaB/NifB CDG55_08955 IPR002792 TRAM domain CDG55_08955 IPR023404 Radical SAM, alpha/beta horseshoe CDG55_08960 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_08960 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_08960 IPR005467 Histidine kinase domain CDG55_08960 IPR013767 PAS fold CDG55_08960 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDG55_08960 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDG55_08960 IPR035965 PAS domain superfamily CDG55_08960 IPR000014 PAS domain CDG55_08960 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDG55_08965 IPR010114 DNA-binding transcriptional regulator NtrC CDG55_08965 IPR003593 AAA+ ATPase domain CDG55_08965 IPR001789 Signal transduction response regulator, receiver domain CDG55_08965 IPR002078 RNA polymerase sigma factor 54 interaction domain CDG55_08965 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDG55_08965 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDG55_08965 IPR009057 Homeobox-like domain superfamily CDG55_08965 IPR011006 CheY-like superfamily CDG55_08965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_08965 IPR002197 DNA binding HTH domain, Fis-type CDG55_08965 IPR025944 Sigma-54 interaction domain, conserved site CDG55_08970 IPR001647 DNA-binding HTH domain, TetR-type CDG55_08970 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDG55_08970 IPR009057 Homeobox-like domain superfamily CDG55_08975 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CDG55_08975 IPR024904 Ornithine carbamoyltransferase CDG55_08975 IPR006130 Aspartate/ornithine carbamoyltransferase CDG55_08975 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CDG55_08975 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CDG55_08975 IPR002292 Ornithine/putrescine carbamoyltransferase CDG55_08985 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CDG55_08985 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily CDG55_08985 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CDG55_08995 IPR006076 FAD dependent oxidoreductase CDG55_08995 IPR023080 D-amino acid dehydrogenase DadA CDG55_08995 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_09005 IPR000362 Fumarate lyase family CDG55_09005 IPR022761 Fumarate lyase, N-terminal CDG55_09005 IPR008948 L-Aspartase-like CDG55_09005 IPR020557 Fumarate lyase, conserved site CDG55_09005 IPR018951 Fumarase C, C-terminal CDG55_09005 IPR024083 Fumarase/histidase, N-terminal CDG55_09005 IPR005677 Fumarate hydratase, class II CDG55_09010 IPR036291 NAD(P)-binding domain superfamily CDG55_09010 IPR005886 UDP-glucose 4-epimerase CDG55_09010 IPR016040 NAD(P)-binding domain CDG55_09015 IPR017463 Sulphur relay, TusD/DsrE CDG55_09015 IPR003787 Sulphur relay, DsrE/F-like protein CDG55_09015 IPR027396 DsrEFH-like CDG55_09035 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_09035 IPR036390 Winged helix DNA-binding domain superfamily CDG55_09035 IPR002577 Helix-turn-helix, HxlR type CDG55_09035 IPR011991 ArsR-like helix-turn-helix domain CDG55_09040 IPR005110 MoeA, N-terminal and linker domain CDG55_09040 IPR036135 MoeA, N-terminal and linker domain superfamily CDG55_09040 IPR001453 MoaB/Mog domain CDG55_09040 IPR008284 Molybdenum cofactor biosynthesis, conserved site CDG55_09040 IPR005111 MoeA, C-terminal, domain IV CDG55_09040 IPR036425 MoaB/Mog-like domain superfamily CDG55_09040 IPR036688 MoeA, C-terminal, domain IV superfamily CDG55_09040 IPR038987 Molybdopterin biosynthesis protein MoeA-like CDG55_09045 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily CDG55_09045 IPR023045 Molybdenum cofactor biosynthesis C CDG55_09045 IPR036425 MoaB/Mog-like domain superfamily CDG55_09045 IPR001453 MoaB/Mog domain CDG55_09045 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA CDG55_09045 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CDG55_09050 IPR003448 Molybdopterin biosynthesis MoaE CDG55_09050 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily CDG55_09060 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CDG55_09060 IPR006638 Elp3/MiaB/NifB CDG55_09060 IPR010505 Molybdenum cofactor synthesis C-terminal CDG55_09060 IPR007197 Radical SAM CDG55_09060 IPR013785 Aldolase-type TIM barrel CDG55_09060 IPR013483 Molybdenum cofactor biosynthesis protein A CDG55_09065 IPR025877 MobA-like NTP transferase CDG55_09065 IPR013482 Molybdenum cofactor guanylyltransferase CDG55_09065 IPR029044 Nucleotide-diphospho-sugar transferases CDG55_09070 IPR006657 Molybdopterin dinucleotide-binding domain CDG55_09070 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CDG55_09070 IPR006656 Molybdopterin oxidoreductase CDG55_09070 IPR009010 Aspartate decarboxylase-like domain superfamily CDG55_09070 IPR007419 BFD-like [2Fe-2S]-binding domain CDG55_09070 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CDG55_09070 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDG55_09070 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain CDG55_09075 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CDG55_09075 IPR017121 Nitrite reductase [NAD(P)H], large subunit CDG55_09075 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CDG55_09075 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CDG55_09075 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal CDG55_09075 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CDG55_09075 IPR007419 BFD-like [2Fe-2S]-binding domain CDG55_09075 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CDG55_09075 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_09075 IPR023753 FAD/NAD(P)-binding domain CDG55_09075 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CDG55_09075 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB CDG55_09080 IPR007419 BFD-like [2Fe-2S]-binding domain CDG55_09080 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CDG55_09080 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CDG55_09080 IPR023753 FAD/NAD(P)-binding domain CDG55_09080 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_09080 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CDG55_09080 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB CDG55_09080 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal CDG55_09080 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type CDG55_09080 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CDG55_09080 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CDG55_09080 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CDG55_09085 IPR020846 Major facilitator superfamily domain CDG55_09085 IPR036259 MFS transporter superfamily CDG55_09085 IPR004737 Nitrate transporter CDG55_09085 IPR011701 Major facilitator superfamily CDG55_09095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_09095 IPR017871 ABC transporter, conserved site CDG55_09095 IPR003593 AAA+ ATPase domain CDG55_09095 IPR003439 ABC transporter-like CDG55_09095 IPR005890 Nitrate transport ATP-binding subunit C/D CDG55_09100 IPR001874 Dehydroquinase, class II CDG55_09100 IPR018509 Dehydroquinase, class II, conserved site CDG55_09100 IPR036441 Dehydroquinase, class II superfamily CDG55_09105 IPR001249 Acetyl-CoA biotin carboxyl carrier CDG55_09105 IPR000089 Biotin/lipoyl attachment CDG55_09105 IPR001882 Biotin-binding site CDG55_09105 IPR011053 Single hybrid motif CDG55_09110 IPR011054 Rudiment single hybrid motif CDG55_09110 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDG55_09110 IPR016185 Pre-ATP-grasp domain superfamily CDG55_09110 IPR011764 Biotin carboxylation domain CDG55_09110 IPR011761 ATP-grasp fold CDG55_09110 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CDG55_09110 IPR005482 Biotin carboxylase, C-terminal CDG55_09110 IPR013815 ATP-grasp fold, subdomain 1 CDG55_09110 IPR005481 Biotin carboxylase-like, N-terminal domain CDG55_09120 IPR020556 Amidase, conserved site CDG55_09120 IPR000120 Amidase CDG55_09120 IPR036928 Amidase signature (AS) superfamily CDG55_09120 IPR023631 Amidase signature domain CDG55_09125 IPR026032 Probable 3-phenylpropionic acid transporter CDG55_09125 IPR036259 MFS transporter superfamily CDG55_09125 IPR024989 Major facilitator superfamily associated domain CDG55_09140 IPR016167 FAD-binding, type PCMH, subdomain 1 CDG55_09140 IPR036318 FAD-binding, type PCMH-like superfamily CDG55_09140 IPR016166 FAD-binding domain, PCMH-type CDG55_09140 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CDG55_09140 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG55_09140 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CDG55_09140 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily CDG55_09140 IPR006094 FAD linked oxidase, N-terminal CDG55_09145 IPR036196 Phosphotyrosine protein phosphatase I superfamily CDG55_09145 IPR023485 Phosphotyrosine protein phosphatase I CDG55_09145 IPR017867 Protein-tyrosine phosphatase, low molecular weight CDG55_09150 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CDG55_09150 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CDG55_09150 IPR039697 Iron-type alcohol dehydrogenase-like CDG55_09155 IPR006683 Thioesterase domain CDG55_09155 IPR029069 HotDog domain superfamily CDG55_09160 IPR001270 ClpA/B family CDG55_09160 IPR012763 DNA polymerase III, subunit gamma/ tau CDG55_09160 IPR021029 DNA polymerase III, tau subunit, domain V CDG55_09160 IPR022754 DNA polymerase III, gamma subunit, domain III CDG55_09160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_09160 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily CDG55_09160 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CDG55_09160 IPR003593 AAA+ ATPase domain CDG55_09160 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV CDG55_09165 IPR003347 JmjC domain CDG55_09165 IPR039994 JmjC domain-containing CDG55_09180 IPR036259 MFS transporter superfamily CDG55_09180 IPR020846 Major facilitator superfamily domain CDG55_09180 IPR011701 Major facilitator superfamily CDG55_09185 IPR014509 Uncharacterised conserved protein UCP020606 CDG55_09190 IPR018490 Cyclic nucleotide-binding-like CDG55_09190 IPR018488 Cyclic nucleotide-binding, conserved site CDG55_09190 IPR000595 Cyclic nucleotide-binding domain CDG55_09190 IPR005821 Ion transport domain CDG55_09190 IPR014710 RmlC-like jelly roll fold CDG55_09190 IPR028325 Voltage-gated potassium channel CDG55_09210 IPR004406 Aconitase B CDG55_09210 IPR015929 Aconitase B, swivel CDG55_09210 IPR036008 Aconitase, iron-sulfur domain CDG55_09210 IPR018136 Aconitase family, 4Fe-4S cluster binding site CDG55_09210 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDG55_09210 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CDG55_09210 IPR015932 Aconitase, domain 2 CDG55_09210 IPR015933 Aconitase B, HEAT-like domain CDG55_09210 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CDG55_09210 IPR036288 Aconitase B, HEAT-like domain superfamily CDG55_09230 IPR035243 TamA, POTRA domain 1 CDG55_09230 IPR034746 POTRA domain CDG55_09230 IPR039910 Surface antigen D15-like CDG55_09230 IPR010827 POTRA domain, BamA/TamA-like CDG55_09230 IPR000184 Bacterial surface antigen (D15) CDG55_09235 IPR036259 MFS transporter superfamily CDG55_09235 IPR011701 Major facilitator superfamily CDG55_09235 IPR023727 Lysophospholipid transporter LplT CDG55_09240 IPR009078 Ferritin-like superfamily CDG55_09240 IPR011566 Ubiquinone biosynthesis protein Coq7 CDG55_09255 IPR006157 Dihydroneopterin aldolase/epimerase domain CDG55_09255 IPR006156 Dihydroneopterin aldolase CDG55_09260 IPR011009 Protein kinase-like domain superfamily CDG55_09260 IPR000719 Protein kinase domain CDG55_09260 IPR004147 UbiB domain CDG55_09265 IPR035985 Ubiquitin-activating enzyme CDG55_09265 IPR000594 THIF-type NAD/FAD binding fold CDG55_09275 IPR007280 Peptidase, C-terminal, archaeal/bacterial CDG55_09285 IPR013149 Alcohol dehydrogenase, C-terminal CDG55_09285 IPR041694 Oxidoreductase, N-terminal domain CDG55_09285 IPR011032 GroES-like superfamily CDG55_09285 IPR036291 NAD(P)-binding domain superfamily CDG55_09285 IPR020843 Polyketide synthase, enoylreductase domain CDG55_09290 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG55_09290 IPR009057 Homeobox-like domain superfamily CDG55_09290 IPR011075 Tetracyclin repressor-like, C-terminal domain CDG55_09290 IPR001647 DNA-binding HTH domain, TetR-type CDG55_09300 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CDG55_09300 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CDG55_09315 IPR029058 Alpha/Beta hydrolase fold CDG55_09315 IPR000801 Putative esterase CDG55_09315 IPR014186 S-formylglutathione hydrolase CDG55_09320 IPR036291 NAD(P)-binding domain superfamily CDG55_09320 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDG55_09320 IPR013154 Alcohol dehydrogenase, N-terminal CDG55_09320 IPR011032 GroES-like superfamily CDG55_09320 IPR020843 Polyketide synthase, enoylreductase domain CDG55_09320 IPR013149 Alcohol dehydrogenase, C-terminal CDG55_09320 IPR014183 Alcohol dehydrogenase class III CDG55_09325 IPR003735 Metal-sensitive transcriptional repressor CDG55_09325 IPR038390 Metal-sensitive transcriptional repressor superfamily CDG55_09330 IPR036291 NAD(P)-binding domain superfamily CDG55_09330 IPR006162 Phosphopantetheine attachment site CDG55_09330 IPR042104 Polyketide synthase, dehydratase domain superfamily CDG55_09330 IPR036299 Polyketide synthase, docking domain superfmaily CDG55_09330 IPR020807 Polyketide synthase, dehydratase domain CDG55_09330 IPR013968 Polyketide synthase, ketoreductase domain CDG55_09330 IPR020843 Polyketide synthase, enoylreductase domain CDG55_09330 IPR032821 Ketoacyl-synthetase, C-terminal extension CDG55_09330 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDG55_09330 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CDG55_09330 IPR009081 Phosphopantetheine binding ACP domain CDG55_09330 IPR016039 Thiolase-like CDG55_09330 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CDG55_09330 IPR001227 Acyl transferase domain superfamily CDG55_09330 IPR036736 ACP-like superfamily CDG55_09330 IPR014043 Acyl transferase CDG55_09330 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG55_09330 IPR011032 GroES-like superfamily CDG55_09330 IPR018201 Beta-ketoacyl synthase, active site CDG55_09330 IPR014031 Beta-ketoacyl synthase, C-terminal CDG55_09330 IPR013154 Alcohol dehydrogenase, N-terminal CDG55_09330 IPR014030 Beta-ketoacyl synthase, N-terminal CDG55_09335 IPR013154 Alcohol dehydrogenase, N-terminal CDG55_09335 IPR014183 Alcohol dehydrogenase class III CDG55_09335 IPR013149 Alcohol dehydrogenase, C-terminal CDG55_09335 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDG55_09335 IPR011032 GroES-like superfamily CDG55_09335 IPR036291 NAD(P)-binding domain superfamily CDG55_09335 IPR020843 Polyketide synthase, enoylreductase domain CDG55_09340 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_09340 IPR036390 Winged helix DNA-binding domain superfamily CDG55_09340 IPR000847 Transcription regulator HTH, LysR CDG55_09340 IPR005119 LysR, substrate-binding CDG55_09345 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_09345 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDG55_09345 IPR036291 NAD(P)-binding domain superfamily CDG55_09350 IPR020843 Polyketide synthase, enoylreductase domain CDG55_09350 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CDG55_09350 IPR036291 NAD(P)-binding domain superfamily CDG55_09350 IPR011032 GroES-like superfamily CDG55_09350 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 CDG55_09350 IPR013154 Alcohol dehydrogenase, N-terminal CDG55_09350 IPR013149 Alcohol dehydrogenase, C-terminal CDG55_09375 IPR017856 Integrase-like, N-terminal CDG55_09375 IPR002876 Transcriptional regulator TACO1-like CDG55_09375 IPR026564 Transcriptional regulator TACO1-like, domain 3 CDG55_09375 IPR029072 YebC-like CDG55_09390 IPR013029 YchF, C-terminal domain CDG55_09390 IPR023192 TGS-like domain superfamily CDG55_09390 IPR012676 TGS-like CDG55_09390 IPR031167 OBG-type guanine nucleotide-binding (G) domain CDG55_09390 IPR006073 GTP binding domain CDG55_09390 IPR012675 Beta-grasp domain superfamily CDG55_09390 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CDG55_09390 IPR004095 TGS CDG55_09390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_09390 IPR041706 YchF, N-terminal CDG55_09395 IPR000160 GGDEF domain CDG55_09395 IPR029787 Nucleotide cyclase CDG55_09395 IPR033424 Membrane-associated sensor domain CDG55_09410 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_09410 IPR018490 Cyclic nucleotide-binding-like CDG55_09410 IPR000595 Cyclic nucleotide-binding domain CDG55_09410 IPR012318 Crp-type HTH domain CDG55_09410 IPR014710 RmlC-like jelly roll fold CDG55_09410 IPR036390 Winged helix DNA-binding domain superfamily CDG55_09430 IPR011761 ATP-grasp fold CDG55_09430 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CDG55_09430 IPR011054 Rudiment single hybrid motif CDG55_09430 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase CDG55_09430 IPR016185 Pre-ATP-grasp domain superfamily CDG55_09430 IPR013815 ATP-grasp fold, subdomain 1 CDG55_09435 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme CDG55_09435 IPR002934 Polymerase, nucleotidyl transferase domain CDG55_09435 IPR002912 ACT domain CDG55_09435 IPR003607 HD/PDEase domain CDG55_09435 IPR006674 HD domain CDG55_09435 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CDG55_09440 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_09440 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ CDG55_09440 IPR004839 Aminotransferase, class I/classII CDG55_09440 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_09440 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_09450 IPR036390 Winged helix DNA-binding domain superfamily CDG55_09450 IPR011008 Dimeric alpha-beta barrel CDG55_09450 IPR011991 ArsR-like helix-turn-helix domain CDG55_09450 IPR019888 Transcription regulator AsnC-type CDG55_09450 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG55_09450 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDG55_09450 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_09450 IPR000485 AsnC-type HTH domain CDG55_09455 IPR022824 Multidrug resistance protein MdtA CDG55_09455 IPR006143 RND efflux pump, membrane fusion protein CDG55_09455 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDG55_09460 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG55_09460 IPR001036 Acriflavin resistance protein CDG55_09465 IPR029759 Glutathione peroxidase active site CDG55_09465 IPR000889 Glutathione peroxidase CDG55_09465 IPR029760 Glutathione peroxidase conserved site CDG55_09465 IPR036249 Thioredoxin-like superfamily CDG55_09470 IPR028427 Peptide methionine sulfoxide reductase CDG55_09470 IPR002579 Peptide methionine sulphoxide reductase MrsB CDG55_09470 IPR011057 Mss4-like superfamily CDG55_09475 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_09475 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_09475 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_09475 IPR004839 Aminotransferase, class I/classII CDG55_09485 IPR012337 Ribonuclease H-like superfamily CDG55_09485 IPR025246 Transposase IS30-like HTH domain CDG55_09485 IPR001584 Integrase, catalytic core CDG55_09485 IPR001598 Transposase, IS30, conserved site CDG55_09485 IPR036397 Ribonuclease H superfamily CDG55_09490 IPR006664 Outer membrane protein, bacterial CDG55_09490 IPR036737 OmpA-like domain superfamily CDG55_09490 IPR006665 OmpA-like domain CDG55_09490 IPR000498 Outer membrane protein OmpA-like, transmembrane domain CDG55_09490 IPR002368 Outer membrane protein, OmpA CDG55_09490 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG55_09490 IPR006690 Outer membrane protein, OmpA-like, conserved site CDG55_09555 IPR004839 Aminotransferase, class I/classII CDG55_09555 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_09555 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_09555 IPR000524 Transcription regulator HTH, GntR CDG55_09555 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_09555 IPR036390 Winged helix DNA-binding domain superfamily CDG55_09555 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_09560 IPR020449 Transcription regulator HTH, AraC- type CDG55_09560 IPR018060 DNA binding HTH domain, AraC-type CDG55_09560 IPR009057 Homeobox-like domain superfamily CDG55_09560 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG55_09570 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_09570 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDG55_09570 IPR036291 NAD(P)-binding domain superfamily CDG55_09570 IPR014007 Acetoin reductase CDG55_09585 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CDG55_09585 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily CDG55_09585 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain CDG55_09585 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CDG55_09585 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CDG55_09585 IPR022861 Glutamine-tRNA ligase, bacterial CDG55_09585 IPR004514 Glutamine-tRNA synthetase CDG55_09585 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDG55_09585 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CDG55_09585 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_09590 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CDG55_09590 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CDG55_09590 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CDG55_09590 IPR029000 Cyclophilin-like domain superfamily CDG55_09595 IPR029052 Metallo-dependent phosphatase-like CDG55_09595 IPR010138 UDP-2,3-diacylglucosamine hydrolase CDG55_09595 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CDG55_09610 IPR005001 RNA-binding protein Hfq CDG55_09610 IPR010920 LSM domain superfamily CDG55_09615 IPR039657 Dimethylallyltransferase CDG55_09615 IPR018022 IPP transferase CDG55_09615 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_09620 IPR002099 DNA mismatch repair protein family, N-terminal CDG55_09620 IPR014762 DNA mismatch repair, conserved site CDG55_09620 IPR020667 DNA mismatch repair protein, MutL CDG55_09620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_09620 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms CDG55_09620 IPR014790 MutL, C-terminal, dimerisation CDG55_09620 IPR042120 MutL, C-terminal domain, dimerisation subdomain CDG55_09620 IPR042121 MutL, C-terminal domain, regulatory subdomain CDG55_09620 IPR037198 MutL, C-terminal domain superfamily CDG55_09620 IPR013507 DNA mismatch repair protein, S5 domain 2-like CDG55_09620 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG55_09620 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_09625 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CDG55_09625 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_09635 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CDG55_09635 IPR006145 Pseudouridine synthase, RsuA/RluA CDG55_09635 IPR002942 RNA-binding S4 domain CDG55_09635 IPR036986 RNA-binding S4 domain superfamily CDG55_09635 IPR006225 Pseudouridine synthase, RluC/RluD CDG55_09635 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDG55_09645 IPR024170 Aminoglycoside N6-acetyltransferase CDG55_09645 IPR016181 Acyl-CoA N-acyltransferase CDG55_09645 IPR000182 GNAT domain CDG55_09650 IPR006145 Pseudouridine synthase, RsuA/RluA CDG55_09650 IPR002942 RNA-binding S4 domain CDG55_09650 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CDG55_09650 IPR036986 RNA-binding S4 domain superfamily CDG55_09650 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDG55_09650 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CDG55_09650 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CDG55_09660 IPR011251 Luciferase-like domain CDG55_09660 IPR036661 Luciferase-like domain superfamily CDG55_09660 IPR019949 Luciferase family oxidoreductase, group 1 CDG55_09665 IPR005177 Bifunctional kinase-pyrophosphorylase CDG55_09665 IPR026530 Phosphoenolpyruvate synthase regulatory protein CDG55_09670 IPR023151 PEP-utilising enzyme, conserved site CDG55_09670 IPR018274 PEP-utilising enzyme, active site CDG55_09670 IPR013815 ATP-grasp fold, subdomain 1 CDG55_09670 IPR008279 PEP-utilising enzyme, mobile domain CDG55_09670 IPR006319 Phosphoenolpyruvate synthase CDG55_09670 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CDG55_09670 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CDG55_09670 IPR000121 PEP-utilising enzyme, C-terminal CDG55_09670 IPR036637 Phosphohistidine domain superfamily CDG55_09670 IPR040442 Pyruvate kinase-like domain superfamily CDG55_09680 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CDG55_09680 IPR008972 Cupredoxin CDG55_09680 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain CDG55_09680 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CDG55_09680 IPR010514 COX aromatic rich motif CDG55_09680 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily CDG55_09680 IPR006333 Cytochrome o ubiquinol oxidase subunit II CDG55_09685 IPR000883 Cytochrome c oxidase subunit I CDG55_09685 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CDG55_09685 IPR014207 Cytochrome o ubiquinol oxidase, subunit I CDG55_09685 IPR023616 Cytochrome c oxidase-like, subunit I domain CDG55_09685 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CDG55_09690 IPR024791 Cytochrome c oxidase subunit III CDG55_09690 IPR033946 Ubiquinol oxidase subunit III domain CDG55_09690 IPR000298 Cytochrome c oxidase subunit III-like CDG55_09690 IPR014206 Cytochrome o ubiquinol oxidase, subunit III CDG55_09690 IPR035973 Cytochrome c oxidase subunit III-like superfamily CDG55_09690 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CDG55_09695 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes CDG55_09695 IPR014210 Cytochrome o ubiquinol oxidase subunit IV CDG55_09700 IPR000537 UbiA prenyltransferase family CDG55_09700 IPR030470 UbiA prenyltransferase conserved site CDG55_09700 IPR006369 Protohaem IX farnesyltransferase CDG55_09715 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CDG55_09715 IPR000529 Ribosomal protein S6 CDG55_09715 IPR020814 Ribosomal protein S6, plastid/chloroplast CDG55_09715 IPR020815 Ribosomal protein S6, conserved site CDG55_09715 IPR035980 Ribosomal protein S6 superfamily CDG55_09720 IPR018275 Ribosomal protein S18, conserved site CDG55_09720 IPR036870 Ribosomal protein S18 superfamily CDG55_09720 IPR001648 Ribosomal protein S18 CDG55_09725 IPR020069 Ribosomal protein L9, C-terminal CDG55_09725 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CDG55_09725 IPR020070 Ribosomal protein L9, N-terminal CDG55_09725 IPR036935 Ribosomal protein L9, N-terminal domain superfamily CDG55_09725 IPR000244 Ribosomal protein L9 CDG55_09725 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CDG55_09725 IPR020594 Ribosomal protein L9, bacteria/chloroplast CDG55_09730 IPR007694 DNA helicase, DnaB-like, C-terminal CDG55_09730 IPR007693 DNA helicase, DnaB-like, N-terminal CDG55_09730 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CDG55_09730 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_09730 IPR007692 DNA helicase, DnaB type CDG55_09730 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CDG55_09730 IPR003593 AAA+ ATPase domain CDG55_09735 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CDG55_09735 IPR000821 Alanine racemase CDG55_09735 IPR011079 Alanine racemase, C-terminal CDG55_09735 IPR001608 Alanine racemase, N-terminal CDG55_09735 IPR029066 PLP-binding barrel CDG55_09745 IPR038765 Papain-like cysteine peptidase superfamily CDG55_09745 IPR013589 Bacterial transglutaminase-like, N-terminal CDG55_09745 IPR002931 Transglutaminase-like CDG55_09755 IPR025841 Circularly permuted ATP-grasp type 2 CDG55_09755 IPR016450 Uncharacterised conserved protein UCP005522 CDG55_09765 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CDG55_09765 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CDG55_09765 IPR000962 Zinc finger, DksA/TraR C4-type CDG55_09770 IPR001114 Adenylosuccinate synthetase CDG55_09770 IPR042111 Adenylosuccinate synthetase, domain 3 CDG55_09770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_09770 IPR042110 Adenylosuccinate synthetase, domain 2 CDG55_09770 IPR042109 Adenylosuccinate synthetase, domain 1 CDG55_09770 IPR033128 Adenylosuccinate synthase, active site CDG55_09770 IPR018220 Adenylosuccinate synthase, GTP-binding site CDG55_09775 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CDG55_09775 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CDG55_09775 IPR004517 ATP phosphoribosyltransferase regulatory subunit CDG55_09790 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CDG55_09790 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CDG55_09790 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CDG55_09790 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CDG55_09790 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CDG55_09790 IPR036291 NAD(P)-binding domain superfamily CDG55_09795 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CDG55_09795 IPR009000 Translation protein, beta-barrel domain superfamily CDG55_09795 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CDG55_09795 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CDG55_09795 IPR003156 DHHA1 domain CDG55_09795 IPR002318 Alanine-tRNA ligase, class IIc CDG55_09795 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CDG55_09795 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CDG55_09795 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CDG55_09800 IPR018042 Aspartate kinase, conserved site CDG55_09800 IPR036393 Acetylglutamate kinase-like superfamily CDG55_09800 IPR002912 ACT domain CDG55_09800 IPR041740 Aspartokinase catalytic domain CDG55_09800 IPR001048 Aspartate/glutamate/uridylate kinase CDG55_09800 IPR005260 Aspartate kinase, monofunctional class CDG55_09800 IPR027795 CASTOR, ACT domain CDG55_09800 IPR001341 Aspartate kinase CDG55_09805 IPR036107 Carbon storage regulator superfamily CDG55_09805 IPR003751 Translational regulator CsrA CDG55_09810 IPR012337 Ribonuclease H-like superfamily CDG55_09810 IPR024567 Ribonuclease HII/HIII domain CDG55_09810 IPR001352 Ribonuclease HII/HIII CDG55_09810 IPR022898 Ribonuclease HII CDG55_09810 IPR036397 Ribonuclease H superfamily CDG55_09825 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CDG55_09825 IPR016174 Di-haem cytochrome, transmembrane CDG55_09830 IPR028892 Adenine deaminase type 2 CDG55_09830 IPR006330 Adenosine/adenine deaminase CDG55_09830 IPR001365 Adenosine/AMP deaminase domain CDG55_09830 IPR032466 Metal-dependent hydrolase CDG55_09835 IPR006043 Xanthine/uracil/vitamin C permease CDG55_09835 IPR026033 Azaguanine-like transporters CDG55_09860 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDG55_09860 IPR017938 Riboflavin synthase-like beta-barrel CDG55_09860 IPR029039 Flavoprotein-like superfamily CDG55_09860 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDG55_09860 IPR008254 Flavodoxin/nitric oxide synthase CDG55_09860 IPR001094 Flavodoxin-like CDG55_09860 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG55_09860 IPR017927 FAD-binding domain, ferredoxin reductase-type CDG55_09860 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria CDG55_09860 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding CDG55_09860 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain CDG55_09860 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily CDG55_09880 IPR000390 Small multidrug resistance protein family CDG55_09885 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_09885 IPR026904 GidA associated domain 3 CDG55_09885 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG CDG55_09885 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related CDG55_09885 IPR020595 MnmG-related, conserved site CDG55_09895 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_09895 IPR004498 Ribosomal protein L11 methyltransferase CDG55_09905 IPR002197 DNA binding HTH domain, Fis-type CDG55_09905 IPR005412 DNA-binding protein Fis CDG55_09905 IPR009057 Homeobox-like domain superfamily CDG55_09910 IPR016193 Cytidine deaminase-like CDG55_09910 IPR024051 AICAR transformylase, duplicated domain superfamily CDG55_09910 IPR011607 Methylglyoxal synthase-like domain CDG55_09910 IPR036914 Methylglyoxal synthase-like domain superfamily CDG55_09910 IPR002695 Bifunctional purine biosynthesis protein PurH-like CDG55_09915 IPR013815 ATP-grasp fold, subdomain 1 CDG55_09915 IPR016185 Pre-ATP-grasp domain superfamily CDG55_09915 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDG55_09915 IPR011761 ATP-grasp fold CDG55_09915 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CDG55_09915 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CDG55_09915 IPR020559 Phosphoribosylglycinamide synthetase, conserved site CDG55_09915 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily CDG55_09915 IPR011054 Rudiment single hybrid motif CDG55_09915 IPR000115 Phosphoribosylglycinamide synthetase CDG55_09920 IPR004872 Lipoprotein NlpA family CDG55_09925 IPR018449 NIL domain CDG55_09925 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CDG55_09925 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CDG55_09925 IPR003593 AAA+ ATPase domain CDG55_09925 IPR003439 ABC transporter-like CDG55_09925 IPR026253 Methionine import ATP-binding protein MetN CDG55_09925 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_09925 IPR017871 ABC transporter, conserved site CDG55_09930 IPR035906 MetI-like superfamily CDG55_09930 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDG55_09945 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain CDG55_09945 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG55_09945 IPR001279 Metallo-beta-lactamase CDG55_09945 IPR017782 Hydroxyacylglutathione hydrolase CDG55_09945 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain CDG55_09955 IPR042172 Adenosylhomocysteinase-like superfamily CDG55_09955 IPR000043 Adenosylhomocysteinase-like CDG55_09955 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CDG55_09955 IPR036291 NAD(P)-binding domain superfamily CDG55_09955 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site CDG55_09960 IPR003171 Methylenetetrahydrofolate reductase CDG55_09960 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase CDG55_09960 IPR029041 FAD-linked oxidoreductase-like CDG55_09960 IPR004620 5,10-methylenetetrahydrofolate reductase CDG55_09965 IPR015947 PUA-like superfamily CDG55_09965 IPR006700 Ribosomal RNA small subunit methyltransferase E CDG55_09965 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG55_09965 IPR029028 Alpha/beta knot methyltransferases CDG55_09970 IPR035919 EAL domain superfamily CDG55_09970 IPR000160 GGDEF domain CDG55_09970 IPR005330 MHYT domain CDG55_09970 IPR029787 Nucleotide cyclase CDG55_09970 IPR001633 EAL domain CDG55_09975 IPR002505 Phosphate acetyl/butaryl transferase CDG55_09975 IPR015884 Malic enzyme, conserved site CDG55_09975 IPR012301 Malic enzyme, N-terminal domain CDG55_09975 IPR037062 Malic enzyme, N-terminal domain superfamily CDG55_09975 IPR012302 Malic enzyme, NAD-binding CDG55_09975 IPR042112 Phosphate acetyltransferase, domain 2 CDG55_09975 IPR042113 Phosphate acetyltransferase, domain 1 CDG55_09975 IPR036291 NAD(P)-binding domain superfamily CDG55_09975 IPR012188 NAD(P)-dependent malic enzyme CDG55_09980 IPR003607 HD/PDEase domain CDG55_09980 IPR012006 tRNA nucleotidyltransferase, proteobacteria CDG55_09980 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CDG55_09980 IPR002646 Poly A polymerase, head domain CDG55_09985 IPR018101 Translation elongation factor Ts, conserved site CDG55_09985 IPR036402 Elongation factor Ts, dimerisation domain superfamily CDG55_09985 IPR001816 Translation elongation factor EFTs/EF1B CDG55_09985 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CDG55_09985 IPR009060 UBA-like superfamily CDG55_09990 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CDG55_09990 IPR018130 Ribosomal protein S2, conserved site CDG55_09990 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CDG55_09990 IPR001865 Ribosomal protein S2 CDG55_09995 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CDG55_09995 IPR001714 Peptidase M24, methionine aminopeptidase CDG55_09995 IPR000994 Peptidase M24 CDG55_09995 IPR036005 Creatinase/aminopeptidase-like CDG55_10010 IPR025668 Transposase DDE domain CDG55_10020 IPR011701 Major facilitator superfamily CDG55_10020 IPR036259 MFS transporter superfamily CDG55_10020 IPR004737 Nitrate transporter CDG55_10020 IPR020846 Major facilitator superfamily domain CDG55_10030 IPR011782 Peptidase S1C, Do CDG55_10030 IPR036034 PDZ superfamily CDG55_10030 IPR001478 PDZ domain CDG55_10030 IPR001940 Peptidase S1C CDG55_10030 IPR009003 Peptidase S1, PA clan CDG55_10035 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CDG55_10035 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CDG55_10040 IPR019833 Manganese/iron superoxide dismutase, binding site CDG55_10040 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CDG55_10040 IPR001189 Manganese/iron superoxide dismutase CDG55_10040 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CDG55_10040 IPR019831 Manganese/iron superoxide dismutase, N-terminal CDG55_10040 IPR019832 Manganese/iron superoxide dismutase, C-terminal CDG55_10055 IPR009078 Ferritin-like superfamily CDG55_10055 IPR012347 Ferritin-like CDG55_10055 IPR010386 tRNA-hydroxylase MiaE CDG55_10060 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ CDG55_10060 IPR013785 Aldolase-type TIM barrel CDG55_10060 IPR036130 Pyridoxine 5'-phosphate synthase CDG55_10065 IPR022572 DNA replication/recombination mediator RecO, N-terminal CDG55_10065 IPR012340 Nucleic acid-binding, OB-fold CDG55_10065 IPR003717 Recombination protein O, RecO CDG55_10065 IPR037278 ARFGAP/RecO-like zinc finger CDG55_10075 IPR009019 K homology domain superfamily, prokaryotic type CDG55_10075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_10075 IPR015946 K homology domain-like, alpha/beta CDG55_10075 IPR006073 GTP binding domain CDG55_10075 IPR030388 Era-type guanine nucleotide-binding (G) domain CDG55_10075 IPR005225 Small GTP-binding protein domain CDG55_10075 IPR004044 K Homology domain, type 2 CDG55_10075 IPR005662 GTP-binding protein Era CDG55_10080 IPR036389 Ribonuclease III, endonuclease domain superfamily CDG55_10080 IPR014720 Double-stranded RNA-binding domain CDG55_10080 IPR011907 Ribonuclease III CDG55_10080 IPR000999 Ribonuclease III domain CDG55_10090 IPR036286 LexA/Signal peptidase-like superfamily CDG55_10090 IPR000223 Peptidase S26A, signal peptidase I CDG55_10090 IPR019758 Peptidase S26A, signal peptidase I, conserved site CDG55_10090 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CDG55_10090 IPR019756 Peptidase S26A, signal peptidase I, serine active site CDG55_10090 IPR019533 Peptidase S26 CDG55_10095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_10095 IPR035654 Elongation factor 4, domain IV CDG55_10095 IPR013842 GTP-binding protein LepA, C-terminal CDG55_10095 IPR038363 LepA, C-terminal domain superfamily CDG55_10095 IPR031157 Tr-type G domain, conserved site CDG55_10095 IPR004161 Translation elongation factor EFTu-like, domain 2 CDG55_10095 IPR000640 Elongation factor EFG, domain V-like CDG55_10095 IPR035647 EF-G domain III/V-like CDG55_10095 IPR006297 Elongation factor 4 CDG55_10095 IPR000795 Transcription factor, GTP-binding domain CDG55_10095 IPR005225 Small GTP-binding protein domain CDG55_10105 IPR011782 Peptidase S1C, Do CDG55_10105 IPR001940 Peptidase S1C CDG55_10105 IPR009003 Peptidase S1, PA clan CDG55_10105 IPR036034 PDZ superfamily CDG55_10105 IPR001478 PDZ domain CDG55_10110 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CDG55_10110 IPR005288 L-aspartate oxidase CDG55_10110 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CDG55_10110 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_10110 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CDG55_10110 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CDG55_10115 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_10115 IPR039430 Thymidylate kinase-like domain CDG55_10115 IPR018094 Thymidylate kinase CDG55_10120 IPR003770 Endolytic murein transglycosylase CDG55_10125 IPR036038 Aminotransferase-like, PLP-dependent enzymes CDG55_10125 IPR017824 Aminodeoxychorismate lyase, class IV CDG55_10125 IPR001544 Aminotransferase class IV CDG55_10125 IPR018300 Aminotransferase, class IV, conserved site CDG55_10130 IPR005669 Thiosulphate/Sulfate-binding protein CDG55_10130 IPR034408 Sulphate/thiosulphate-binding site CDG55_10130 IPR000957 Sulphate/thiosulphate-binding, conserved site CDG55_10140 IPR011865 Sulphate ABC transporter, permease protein CysT CDG55_10140 IPR005667 Sulphate ABC transporter permease protein 2 CDG55_10140 IPR035906 MetI-like superfamily CDG55_10140 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDG55_10145 IPR005667 Sulphate ABC transporter permease protein 2 CDG55_10145 IPR011866 Sulphate ABC transporter, permease protein CysW CDG55_10145 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDG55_10145 IPR035906 MetI-like superfamily CDG55_10150 IPR005666 Sulphate transport system permease protein 1 CDG55_10150 IPR003593 AAA+ ATPase domain CDG55_10150 IPR003439 ABC transporter-like CDG55_10150 IPR008995 Molybdate/tungstate binding, C-terminal CDG55_10150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_10150 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal CDG55_10150 IPR017871 ABC transporter, conserved site CDG55_10150 IPR024765 TOBE-like domain CDG55_10155 IPR000847 Transcription regulator HTH, LysR CDG55_10155 IPR036390 Winged helix DNA-binding domain superfamily CDG55_10155 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_10155 IPR005119 LysR, substrate-binding CDG55_10155 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain CDG55_10165 IPR011004 Trimeric LpxA-like superfamily CDG55_10165 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 CDG55_10165 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily CDG55_10165 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family CDG55_10165 IPR001451 Hexapeptide repeat CDG55_10165 IPR018357 Hexapeptide transferase, conserved site CDG55_10170 IPR024924 7-carboxy-7-deazaguanine synthase-like CDG55_10170 IPR013785 Aldolase-type TIM barrel CDG55_10170 IPR007197 Radical SAM CDG55_10175 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_10175 IPR018317 Queuosine biosynthesis protein QueC CDG55_10190 IPR036249 Thioredoxin-like superfamily CDG55_10190 IPR013766 Thioredoxin domain CDG55_10190 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDG55_10200 IPR000086 NUDIX hydrolase domain CDG55_10200 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_10200 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain CDG55_10200 IPR015797 NUDIX hydrolase-like domain superfamily CDG55_10200 IPR004821 Cytidyltransferase-like domain CDG55_10200 IPR020084 NUDIX hydrolase, conserved site CDG55_10205 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDG55_10205 IPR029045 ClpP/crotonase-like domain superfamily CDG55_10205 IPR001753 Enoyl-CoA hydratase/isomerase CDG55_10210 IPR029479 Nitroreductase CDG55_10210 IPR000415 Nitroreductase-like CDG55_10215 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDG55_10215 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria CDG55_10215 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CDG55_10215 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CDG55_10220 IPR036676 PurM-like, C-terminal domain superfamily CDG55_10220 IPR036921 PurM-like, N-terminal domain superfamily CDG55_10220 IPR010918 PurM-like, C-terminal domain CDG55_10220 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain CDG55_10220 IPR010073 Phosphoribosylformylglycinamidine synthase PurL CDG55_10220 IPR017926 Glutamine amidotransferase CDG55_10220 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily CDG55_10220 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal CDG55_10220 IPR029062 Class I glutamine amidotransferase-like CDG55_10230 IPR006674 HD domain CDG55_10230 IPR006261 dNTP triphosphohydrolase CDG55_10230 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily CDG55_10230 IPR003607 HD/PDEase domain CDG55_10230 IPR023024 dNTP triphosphohydrolase, type 3 CDG55_10230 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal CDG55_10235 IPR010994 RuvA domain 2-like CDG55_10235 IPR012340 Nucleic acid-binding, OB-fold CDG55_10235 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CDG55_10235 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CDG55_10235 IPR036267 RuvA, C-terminal domain superfamily CDG55_10235 IPR011114 Holliday junction DNA helicase RuvA, C-terminal CDG55_10235 IPR000085 Bacterial DNA recombination protein RuvA CDG55_10240 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_10240 IPR008823 RuvB C-terminal winged helix domain CDG55_10240 IPR036390 Winged helix DNA-binding domain superfamily CDG55_10240 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_10240 IPR004605 DNA helicase, Holliday junction RuvB-type CDG55_10240 IPR041445 RuvB, AAA lid domain CDG55_10240 IPR003593 AAA+ ATPase domain CDG55_10240 IPR008824 RuvB-like P-loop domain CDG55_10250 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase CDG55_10250 IPR006683 Thioesterase domain CDG55_10250 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CDG55_10250 IPR029069 HotDog domain superfamily CDG55_10250 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CDG55_10255 IPR002898 MotA/TolQ/ExbB proton channel CDG55_10255 IPR014163 Tol-Pal system, TolQ CDG55_10260 IPR014168 Tol-Pal system protein TolR CDG55_10260 IPR003400 Biopolymer transport protein ExbD/TolR CDG55_10270 IPR011042 Six-bladed beta-propeller, TolB-like CDG55_10270 IPR011659 WD40-like Beta Propeller CDG55_10270 IPR014167 Tol-Pal system protein TolB CDG55_10270 IPR036752 TolB, N-terminal domain superfamily CDG55_10270 IPR007195 TolB, N-terminal CDG55_10275 IPR039001 Peptidoglycan-associated lipoprotein CDG55_10275 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal CDG55_10275 IPR006664 Outer membrane protein, bacterial CDG55_10275 IPR006690 Outer membrane protein, OmpA-like, conserved site CDG55_10275 IPR006665 OmpA-like domain CDG55_10275 IPR036737 OmpA-like domain superfamily CDG55_10285 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal CDG55_10285 IPR000146 Fructose-1,6-bisphosphatase class 1 CDG55_10285 IPR028343 Fructose-1,6-bisphosphatase CDG55_10290 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CDG55_10290 IPR001537 tRNA/rRNA methyltransferase, SpoU type CDG55_10290 IPR029028 Alpha/beta knot methyltransferases CDG55_10290 IPR029064 50S ribosomal protein L30e-like CDG55_10290 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG55_10325 IPR001957 Chromosomal replication control, initiator DnaA CDG55_10325 IPR024633 DnaA N-terminal domain CDG55_10325 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CDG55_10325 IPR013317 Chromosomal replication initiator protein DnaA CDG55_10325 IPR020591 Chromosomal replication control, initiator DnaA-like CDG55_10325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_10325 IPR010921 Trp repressor/replication initiator CDG55_10325 IPR013159 Chromosomal replication initiator, DnaA C-terminal CDG55_10325 IPR003593 AAA+ ATPase domain CDG55_10325 IPR038454 DnaA, N-terminal domain superfamily CDG55_10330 IPR002549 Transmembrane protein TqsA-like CDG55_10335 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CDG55_10335 IPR010918 PurM-like, C-terminal domain CDG55_10335 IPR036676 PurM-like, C-terminal domain superfamily CDG55_10335 IPR016188 PurM-like, N-terminal domain CDG55_10335 IPR036921 PurM-like, N-terminal domain superfamily CDG55_10340 IPR002376 Formyl transferase, N-terminal CDG55_10340 IPR036477 Formyl transferase, N-terminal domain superfamily CDG55_10340 IPR004607 Phosphoribosylglycinamide formyltransferase CDG55_10340 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CDG55_10350 IPR029058 Alpha/Beta hydrolase fold CDG55_10350 IPR000073 Alpha/beta hydrolase fold-1 CDG55_10355 IPR004670 Na+/H+ antiporter NhaA CDG55_10355 IPR023171 Na/H antiporter domain superfamily CDG55_10355 IPR029045 ClpP/crotonase-like domain superfamily CDG55_10355 IPR002142 Peptidase S49 CDG55_10360 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase CDG55_10360 IPR004960 Bacterial lipid A biosynthesis acyltransferase CDG55_10365 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG55_10365 IPR025405 Domain of unknown function DUF4131 CDG55_10365 IPR004797 Competence protein ComEC/Rec2 CDG55_10365 IPR035681 ComA-like, MBL domain CDG55_10365 IPR004477 ComEC/Rec2-related protein CDG55_10365 IPR001279 Metallo-beta-lactamase CDG55_10370 IPR015854 ABC transporter, lipoprotein release, LolD CDG55_10370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_10370 IPR017871 ABC transporter, conserved site CDG55_10370 IPR003439 ABC transporter-like CDG55_10370 IPR003593 AAA+ ATPase domain CDG55_10375 IPR025857 MacB-like periplasmic core domain CDG55_10375 IPR003838 ABC transporter permease protein domain CDG55_10375 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E CDG55_10390 IPR003791 Protein of unknown function UPF0178 CDG55_10400 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_10400 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_10400 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_10400 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CDG55_10400 IPR000192 Aminotransferase class V domain CDG55_10400 IPR022278 Phosphoserine aminotransferase CDG55_10410 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDG55_10425 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CDG55_10425 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CDG55_10425 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CDG55_10425 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDG55_10425 IPR005743 DNA gyrase, subunit A CDG55_10425 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CDG55_10425 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CDG55_10435 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CDG55_10435 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDG55_10435 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CDG55_10435 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CDG55_10435 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_10435 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDG55_10435 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal CDG55_10440 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CDG55_10440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_10440 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDG55_10440 IPR012255 Electron transfer flavoprotein, beta subunit CDG55_10440 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CDG55_10450 IPR023009 Tyrosine recombinase XerC/XerD CDG55_10450 IPR011931 Tyrosine recombinase XerC CDG55_10450 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDG55_10450 IPR004107 Integrase, SAM-like, N-terminal CDG55_10450 IPR010998 Integrase/recombinase, N-terminal CDG55_10450 IPR013762 Integrase-like, catalytic domain superfamily CDG55_10450 IPR002104 Integrase, catalytic domain CDG55_10455 IPR004778 Homoserine/Threonine efflux protein CDG55_10455 IPR001123 Amino acid exporter protein, LeuE-type CDG55_10465 IPR001653 Diaminopimelate epimerase, DapF CDG55_10465 IPR018510 Diaminopimelate epimerase, active site CDG55_10470 IPR002986 Diaminopimelate decarboxylase, LysA CDG55_10470 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CDG55_10470 IPR029066 PLP-binding barrel CDG55_10470 IPR000183 Ornithine/DAP/Arg decarboxylase CDG55_10470 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CDG55_10470 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CDG55_10470 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CDG55_10470 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CDG55_10480 IPR004841 Amino acid permease/ SLC12A domain CDG55_10480 IPR004840 Amino acid permease, conserved site CDG55_10485 IPR001463 Sodium:alanine symporter CDG55_10490 IPR041166 LapB, rubredoxin metal binding domain CDG55_10490 IPR004504 DNA repair protein RadA CDG55_10490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_10490 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CDG55_10490 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_10490 IPR003593 AAA+ ATPase domain CDG55_10490 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG55_10500 IPR001204 Phosphate transporter CDG55_10505 IPR036724 Cobalamin-binding domain superfamily CDG55_10505 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily CDG55_10505 IPR004223 Vitamin B12-dependent methionine synthase, activation domain CDG55_10505 IPR000489 Pterin-binding domain CDG55_10505 IPR036594 Methionine synthase domain CDG55_10505 IPR011822 Cobalamin-dependent methionine synthase CDG55_10505 IPR033706 Methionine synthase, B12-binding domain CDG55_10505 IPR036589 Homocysteine-binding domain superfamily CDG55_10505 IPR003726 Homocysteine-binding domain CDG55_10505 IPR011005 Dihydropteroate synthase-like CDG55_10505 IPR006158 Cobalamin (vitamin B12)-binding domain CDG55_10505 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CDG55_10510 IPR025668 Transposase DDE domain CDG55_10530 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_10530 IPR006016 UspA CDG55_10530 IPR006015 Universal stress protein A family CDG55_10545 IPR038445 Neutral ceramidase, C-terminal domain superfamily CDG55_10545 IPR006823 Neutral/alkaline nonlysosomal ceramidase CDG55_10545 IPR031331 Neutral/alkaline non-lysosomal ceramidase, C-terminal CDG55_10545 IPR031329 Neutral/alkaline non-lysosomal ceramidase, N-terminal CDG55_10550 IPR009057 Homeobox-like domain superfamily CDG55_10550 IPR018060 DNA binding HTH domain, AraC-type CDG55_10550 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG55_10565 IPR005116 Transport-associated OB, type 1 CDG55_10565 IPR015852 ABC transporter, molybdenum import, ModC CDG55_10565 IPR017871 ABC transporter, conserved site CDG55_10565 IPR003439 ABC transporter-like CDG55_10565 IPR003593 AAA+ ATPase domain CDG55_10565 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_10565 IPR011868 Molybdate ABC transporter, ATP-binding protein CDG55_10565 IPR004606 Molybdenum-pterin binding CDG55_10565 IPR008995 Molybdate/tungstate binding, C-terminal CDG55_10570 IPR035906 MetI-like superfamily CDG55_10570 IPR011867 Molybdate ABC transporter, permease protein CDG55_10570 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDG55_10575 IPR005950 Molybdate ABC transporter, substrate-binding protein CDG55_10590 IPR007357 Deoxyribodipyrimidine photolyase-related protein CDG55_10590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_10590 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily CDG55_10600 IPR012674 Calycin CDG55_10600 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CDG55_10600 IPR022272 Lipocalin family conserved site CDG55_10600 IPR002446 Lipocalin, bacterial CDG55_10600 IPR022271 Lipocalin, ApoD type CDG55_10605 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CDG55_10605 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CDG55_10605 IPR039697 Iron-type alcohol dehydrogenase-like CDG55_10615 IPR015590 Aldehyde dehydrogenase domain CDG55_10615 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDG55_10615 IPR016160 Aldehyde dehydrogenase, cysteine active site CDG55_10615 IPR016163 Aldehyde dehydrogenase, C-terminal CDG55_10615 IPR016161 Aldehyde/histidinol dehydrogenase CDG55_10615 IPR016162 Aldehyde dehydrogenase, N-terminal CDG55_10620 IPR004840 Amino acid permease, conserved site CDG55_10620 IPR004841 Amino acid permease/ SLC12A domain CDG55_10625 IPR016681 Succinylglutamate desuccinylase CDG55_10625 IPR007036 Succinylglutamate desuccinylase/aspartoacylase CDG55_10630 IPR037031 Succinylarginine dihydrolase superfamily CDG55_10630 IPR007079 Succinylarginine dihydrolase CDG55_10635 IPR017649 Succinylglutamate-semialdehyde dehydrogenase CDG55_10635 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDG55_10635 IPR016160 Aldehyde dehydrogenase, cysteine active site CDG55_10635 IPR016163 Aldehyde dehydrogenase, C-terminal CDG55_10635 IPR016161 Aldehyde/histidinol dehydrogenase CDG55_10635 IPR016162 Aldehyde dehydrogenase, N-terminal CDG55_10635 IPR015590 Aldehyde dehydrogenase domain CDG55_10640 IPR016181 Acyl-CoA N-acyltransferase CDG55_10640 IPR017650 Arginine N-succinyltransferase CDG55_10640 IPR007041 Arginine N-succinyltransferase AstA/AruG CDG55_10645 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria CDG55_10645 IPR004636 Acetylornithine/Succinylornithine transaminase family CDG55_10645 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_10645 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_10645 IPR026330 Succinylornithine transaminase CDG55_10645 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_10645 IPR005814 Aminotransferase class-III CDG55_10650 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CDG55_10650 IPR033524 Leu/Phe/Val dehydrogenases active site CDG55_10650 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CDG55_10650 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CDG55_10650 IPR014362 Glutamate dehydrogenase CDG55_10650 IPR036291 NAD(P)-binding domain superfamily CDG55_10650 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CDG55_10660 IPR036291 NAD(P)-binding domain superfamily CDG55_10660 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_10660 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDG55_10670 IPR036291 NAD(P)-binding domain superfamily CDG55_10670 IPR023667 NAD-dependent malic enzyme, proteobacteria CDG55_10670 IPR001891 Malic oxidoreductase CDG55_10670 IPR012301 Malic enzyme, N-terminal domain CDG55_10670 IPR015884 Malic enzyme, conserved site CDG55_10670 IPR037062 Malic enzyme, N-terminal domain superfamily CDG55_10670 IPR012302 Malic enzyme, NAD-binding CDG55_10675 IPR012788 4-carboxymuconolactone decarboxylase CDG55_10675 IPR003779 Carboxymuconolactone decarboxylase-like CDG55_10675 IPR029032 AhpD-like CDG55_10685 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CDG55_10685 IPR002524 Cation efflux protein CDG55_10685 IPR027470 Cation efflux protein, cytoplasmic domain CDG55_10685 IPR027469 Cation efflux transmembrane domain superfamily CDG55_10690 IPR016174 Di-haem cytochrome, transmembrane CDG55_10690 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CDG55_10695 IPR022925 NADH pyrophosphatase NudC CDG55_10695 IPR015797 NUDIX hydrolase-like domain superfamily CDG55_10695 IPR015376 Zinc ribbon, NADH pyrophosphatase CDG55_10695 IPR000086 NUDIX hydrolase domain CDG55_10695 IPR020084 NUDIX hydrolase, conserved site CDG55_10715 IPR023459 Transcription elongation factor GreA/GreB family CDG55_10715 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CDG55_10715 IPR028624 Transcription elongation factor GreA/GreB CDG55_10715 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CDG55_10715 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CDG55_10715 IPR006358 Transcription elongation factor GreB CDG55_10715 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CDG55_10715 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CDG55_10720 IPR023346 Lysozyme-like domain superfamily CDG55_10720 IPR000189 Prokaryotic transglycosylase, active site CDG55_10720 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG55_10720 IPR008258 Transglycosylase SLT domain 1 CDG55_10720 IPR023703 Membrane-bound lytic murein transglycosylase F CDG55_10730 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase CDG55_10730 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type CDG55_10730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_10730 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CDG55_10735 IPR023346 Lysozyme-like domain superfamily CDG55_10735 IPR000189 Prokaryotic transglycosylase, active site CDG55_10735 IPR008258 Transglycosylase SLT domain 1 CDG55_10740 IPR001915 Peptidase M48 CDG55_10740 IPR022919 Peptidase M48, protease HtpX, putative CDG55_10750 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG55_10750 IPR001036 Acriflavin resistance protein CDG55_10750 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CDG55_10755 IPR017850 Alkaline-phosphatase-like, core domain superfamily CDG55_10755 IPR040423 Phosphoethanolamine transferase CDG55_10755 IPR000917 Sulfatase, N-terminal CDG55_10760 IPR006419 Nicotinamide mononucleotide transporter PnuC CDG55_10765 IPR000073 Alpha/beta hydrolase fold-1 CDG55_10765 IPR029058 Alpha/Beta hydrolase fold CDG55_10775 IPR021908 Protein of unknown function DUF3520 CDG55_10775 IPR022156 Uncharacterised protein YfbK, N-terminal CDG55_10775 IPR002035 von Willebrand factor, type A CDG55_10775 IPR036465 von Willebrand factor A-like domain superfamily CDG55_10780 IPR011005 Dihydropteroate synthase-like CDG55_10780 IPR006390 Dihydropteroate synthase CDG55_10780 IPR000489 Pterin-binding domain CDG55_10790 IPR005936 Peptidase, FtsH CDG55_10790 IPR041569 AAA ATPase, AAA+ lid domain CDG55_10790 IPR003593 AAA+ ATPase domain CDG55_10790 IPR003960 ATPase, AAA-type, conserved site CDG55_10790 IPR003959 ATPase, AAA-type, core CDG55_10790 IPR011546 Peptidase M41, FtsH extracellular CDG55_10790 IPR000642 Peptidase M41 CDG55_10790 IPR037219 Peptidase M41-like CDG55_10790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_10795 IPR015507 Ribosomal RNA large subunit methyltransferase E CDG55_10795 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CDG55_10795 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_10800 IPR001890 RNA-binding, CRM domain CDG55_10800 IPR035920 YhbY-like superfamily CDG55_10800 IPR017924 RNA-binding protein YhbY CDG55_10815 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain CDG55_10815 IPR017926 Glutamine amidotransferase CDG55_10815 IPR006274 Carbamoyl-phosphate synthase, small subunit CDG55_10815 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily CDG55_10815 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain CDG55_10815 IPR029062 Class I glutamine amidotransferase-like CDG55_10820 IPR006275 Carbamoyl-phosphate synthase, large subunit CDG55_10820 IPR016185 Pre-ATP-grasp domain superfamily CDG55_10820 IPR036914 Methylglyoxal synthase-like domain superfamily CDG55_10820 IPR011607 Methylglyoxal synthase-like domain CDG55_10820 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CDG55_10820 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDG55_10820 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily CDG55_10820 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CDG55_10820 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain CDG55_10820 IPR011761 ATP-grasp fold CDG55_10825 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CDG55_10825 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CDG55_10825 IPR028624 Transcription elongation factor GreA/GreB CDG55_10825 IPR006359 Transcription elongation factor GreA CDG55_10825 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CDG55_10825 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CDG55_10825 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CDG55_10825 IPR023459 Transcription elongation factor GreA/GreB family CDG55_10835 IPR018357 Hexapeptide transferase, conserved site CDG55_10835 IPR011004 Trimeric LpxA-like superfamily CDG55_10835 IPR001451 Hexapeptide repeat CDG55_10840 IPR006016 UspA CDG55_10840 IPR006015 Universal stress protein A family CDG55_10840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_10845 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CDG55_10850 IPR008526 Inner membrane protein YedI CDG55_10855 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDG55_10855 IPR002306 Tryptophan-tRNA ligase CDG55_10855 IPR024109 Tryptophan-tRNA ligase, bacterial-type CDG55_10855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_10855 IPR002305 Aminoacyl-tRNA synthetase, class Ic CDG55_10860 IPR010840 Protein of unknown function DUF1449 CDG55_10865 IPR001107 Band 7 domain CDG55_10865 IPR027705 Flotillin family CDG55_10865 IPR036013 Band 7/SPFH domain superfamily CDG55_10865 IPR031905 Flotillin, C-terminal domain CDG55_10870 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CDG55_10870 IPR016102 Succinyl-CoA synthetase-like CDG55_10870 IPR003781 CoA-binding CDG55_10870 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CDG55_10870 IPR005810 Succinyl-CoA ligase, alpha subunit CDG55_10870 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CDG55_10870 IPR036291 NAD(P)-binding domain superfamily CDG55_10875 IPR005809 Succinate--CoA synthetase, beta subunit CDG55_10875 IPR016102 Succinyl-CoA synthetase-like CDG55_10875 IPR011761 ATP-grasp fold CDG55_10875 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CDG55_10875 IPR013815 ATP-grasp fold, subdomain 1 CDG55_10875 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CDG55_10875 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CDG55_10880 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_10880 IPR023753 FAD/NAD(P)-binding domain CDG55_10880 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CDG55_10880 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDG55_10880 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CDG55_10880 IPR006258 Dihydrolipoamide dehydrogenase CDG55_10880 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CDG55_10885 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CDG55_10885 IPR000089 Biotin/lipoyl attachment CDG55_10885 IPR036625 E3-binding domain superfamily CDG55_10885 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CDG55_10885 IPR011053 Single hybrid motif CDG55_10885 IPR006255 Dihydrolipoamide succinyltransferase CDG55_10885 IPR004167 Peripheral subunit-binding domain CDG55_10885 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDG55_10890 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily CDG55_10890 IPR011603 2-oxoglutarate dehydrogenase E1 component CDG55_10890 IPR029061 Thiamin diphosphate-binding fold CDG55_10890 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain CDG55_10890 IPR005475 Transketolase-like, pyrimidine-binding domain CDG55_10890 IPR001017 Dehydrogenase, E1 component CDG55_10890 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal CDG55_10900 IPR036010 2Fe-2S ferredoxin-like superfamily CDG55_10900 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CDG55_10900 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CDG55_10900 IPR009051 Alpha-helical ferredoxin CDG55_10900 IPR012675 Beta-grasp domain superfamily CDG55_10900 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG55_10900 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG55_10900 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CDG55_10905 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CDG55_10905 IPR011281 Succinate dehydrogenase, flavoprotein subunit CDG55_10905 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CDG55_10905 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CDG55_10905 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CDG55_10905 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CDG55_10905 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_10905 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CDG55_10910 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CDG55_10910 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor CDG55_10910 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CDG55_10915 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CDG55_10915 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site CDG55_10915 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit CDG55_10915 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CDG55_10920 IPR016142 Citrate synthase-like, large alpha subdomain CDG55_10920 IPR010953 Citrate synthase, type I CDG55_10920 IPR036969 Citrate synthase superfamily CDG55_10920 IPR024176 Citrate synthase, bacterial-type CDG55_10920 IPR002020 Citrate synthase CDG55_10920 IPR016143 Citrate synthase-like, small alpha subdomain CDG55_10920 IPR019810 Citrate synthase active site CDG55_10945 IPR032816 SNARE associated Golgi protein CDG55_10965 IPR000943 RNA polymerase sigma-70 CDG55_10965 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CDG55_10965 IPR013324 RNA polymerase sigma factor, region 3/4-like CDG55_10965 IPR013325 RNA polymerase sigma factor, region 2 CDG55_10965 IPR042189 Sigma-70 factor, region 1.1 superfamily CDG55_10965 IPR007127 RNA polymerase sigma factor 70, region 1.1 CDG55_10965 IPR007631 RNA polymerase sigma factor 70, non-essential domain CDG55_10965 IPR007630 RNA polymerase sigma-70 region 4 CDG55_10965 IPR007624 RNA polymerase sigma-70 region 3 CDG55_10965 IPR007627 RNA polymerase sigma-70 region 2 CDG55_10965 IPR009042 RNA polymerase sigma-70 region 1.2 CDG55_10965 IPR014284 RNA polymerase sigma-70 like domain CDG55_10965 IPR028630 RNA polymerase sigma factor RpoD CDG55_10965 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_10970 IPR007454 Uncharacterised protein family UPF0250 CDG55_10970 IPR027471 YbeD-like domain superfamily CDG55_10975 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CDG55_10975 IPR000544 Octanoyltransferase CDG55_10975 IPR020605 Octanoyltransferase, conserved site CDG55_10985 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CDG55_10985 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CDG55_10985 IPR039697 Iron-type alcohol dehydrogenase-like CDG55_10990 IPR002293 Amino acid/polyamine transporter I CDG55_10995 IPR008254 Flavodoxin/nitric oxide synthase CDG55_10995 IPR029039 Flavoprotein-like superfamily CDG55_10995 IPR005025 NADPH-dependent FMN reductase-like CDG55_11000 IPR002577 Helix-turn-helix, HxlR type CDG55_11000 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_11000 IPR036390 Winged helix DNA-binding domain superfamily CDG55_11010 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CDG55_11010 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG55_11010 IPR001537 tRNA/rRNA methyltransferase, SpoU type CDG55_11010 IPR029028 Alpha/beta knot methyltransferases CDG55_11015 IPR006367 Sirohaem synthase, N-terminal CDG55_11015 IPR028281 Siroheme synthase, central domain CDG55_11015 IPR036291 NAD(P)-binding domain superfamily CDG55_11015 IPR014776 Tetrapyrrole methylase, subdomain 2 CDG55_11015 IPR019478 Sirohaem synthase, dimerisation domain CDG55_11015 IPR006366 Uroporphyrin-III C-methyltransferase CDG55_11015 IPR012409 Sirohaem synthase CDG55_11015 IPR014777 Tetrapyrrole methylase, subdomain 1 CDG55_11015 IPR035996 Tetrapyrrole methylase superfamily CDG55_11015 IPR000878 Tetrapyrrole methylase CDG55_11015 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CDG55_11015 IPR037115 Sirohaem synthase, dimerisation domain superfamily CDG55_11020 IPR015866 Serine-tRNA synthetase, type1, N-terminal CDG55_11020 IPR002317 Serine-tRNA ligase, type1 CDG55_11020 IPR033729 Serine-tRNA ligase catalytic core domain CDG55_11020 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CDG55_11020 IPR006195 Aminoacyl-tRNA synthetase, class II CDG55_11020 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily CDG55_11020 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CDG55_11030 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDG55_11030 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CDG55_11030 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria CDG55_11040 IPR001684 Ribosomal protein L27 CDG55_11040 IPR018261 Ribosomal protein L27, conserved site CDG55_11045 IPR018258 Ribosomal protein L21, conserved site CDG55_11045 IPR028909 Ribosomal protein L21-like CDG55_11045 IPR036164 L21-like superfamily CDG55_11045 IPR001787 Ribosomal protein L21 CDG55_11050 IPR008949 Isoprenoid synthase domain superfamily CDG55_11050 IPR000092 Polyprenyl synthetase CDG55_11050 IPR033749 Polyprenyl synthetase, conserved site CDG55_11060 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDG55_11060 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG55_11065 IPR006143 RND efflux pump, membrane fusion protein CDG55_11065 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG55_11070 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG55_11070 IPR001036 Acriflavin resistance protein CDG55_11070 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CDG55_11075 IPR003423 Outer membrane efflux protein CDG55_11075 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CDG55_11080 IPR035439 UPF0145 domain superfamily CDG55_11080 IPR002765 Uncharacterised protein family UPF0145 CDG55_11085 IPR035439 UPF0145 domain superfamily CDG55_11085 IPR002765 Uncharacterised protein family UPF0145 CDG55_11090 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDG55_11090 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_11090 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDG55_11090 IPR036291 NAD(P)-binding domain superfamily CDG55_11100 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CDG55_11100 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CDG55_11100 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CDG55_11100 IPR033705 Valyl tRNA synthetase, anticodon-binding domain CDG55_11100 IPR002300 Aminoacyl-tRNA synthetase, class Ia CDG55_11100 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDG55_11100 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CDG55_11100 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CDG55_11100 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_11100 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CDG55_11100 IPR002303 Valine-tRNA ligase CDG55_11130 IPR000160 GGDEF domain CDG55_11130 IPR029787 Nucleotide cyclase CDG55_11130 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CDG55_11135 IPR029020 Ammonium/urea transporter CDG55_11135 IPR001905 Ammonium transporter CDG55_11135 IPR018047 Ammonium transporter, conserved site CDG55_11135 IPR024041 Ammonium transporter AmtB-like domain CDG55_11150 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDG55_11150 IPR005467 Histidine kinase domain CDG55_11150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_11150 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_11150 IPR003660 HAMP domain CDG55_11150 IPR013727 Two-component sensor kinase, N-terminal CDG55_11150 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDG55_11150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDG55_11155 IPR039420 Transcriptional regulatory protein WalR-like CDG55_11155 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_11155 IPR001789 Signal transduction response regulator, receiver domain CDG55_11155 IPR001867 OmpR/PhoB-type DNA-binding domain CDG55_11155 IPR011006 CheY-like superfamily CDG55_11160 IPR012549 Phosphoethanolamine transferase, N-terminal CDG55_11160 IPR040423 Phosphoethanolamine transferase CDG55_11160 IPR000917 Sulfatase, N-terminal CDG55_11160 IPR017850 Alkaline-phosphatase-like, core domain superfamily CDG55_11180 IPR001423 Lysophospholipase patatin, conserved site CDG55_11180 IPR002641 Patatin-like phospholipase domain CDG55_11180 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG55_11190 IPR001972 Stomatin family CDG55_11190 IPR036013 Band 7/SPFH domain superfamily CDG55_11190 IPR001107 Band 7 domain CDG55_11190 IPR018080 Band 7/stomatin-like, conserved site CDG55_11200 IPR038056 YjbR-like superfamily CDG55_11200 IPR007351 Uncharacterised protein YjbR CDG55_11205 IPR000092 Polyprenyl synthetase CDG55_11205 IPR008949 Isoprenoid synthase domain superfamily CDG55_11205 IPR033749 Polyprenyl synthetase, conserved site CDG55_11210 IPR007400 PrpF protein CDG55_11210 IPR012709 2-methyl-aconitate isomerase PrpF CDG55_11215 IPR004841 Amino acid permease/ SLC12A domain CDG55_11215 IPR004840 Amino acid permease, conserved site CDG55_11230 IPR027303 Glutamine synthetase, glycine-rich site CDG55_11230 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CDG55_11230 IPR008146 Glutamine synthetase, catalytic domain CDG55_11230 IPR036651 Glutamine synthetase, N-terminal domain superfamily CDG55_11235 IPR033879 Undecaprenyl-diphosphatase CDG55_11235 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDG55_11235 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG55_11240 IPR020449 Transcription regulator HTH, AraC- type CDG55_11240 IPR003313 AraC-type arabinose-binding/dimerisation domain CDG55_11240 IPR037923 Transcription regulator HTH-like CDG55_11240 IPR018062 HTH domain AraC-type, conserved site CDG55_11240 IPR018060 DNA binding HTH domain, AraC-type CDG55_11240 IPR009057 Homeobox-like domain superfamily CDG55_11245 IPR016161 Aldehyde/histidinol dehydrogenase CDG55_11245 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDG55_11245 IPR016163 Aldehyde dehydrogenase, C-terminal CDG55_11245 IPR015590 Aldehyde dehydrogenase domain CDG55_11245 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CDG55_11245 IPR016162 Aldehyde dehydrogenase, N-terminal CDG55_11250 IPR039420 Transcriptional regulatory protein WalR-like CDG55_11250 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_11250 IPR011006 CheY-like superfamily CDG55_11250 IPR001867 OmpR/PhoB-type DNA-binding domain CDG55_11250 IPR001789 Signal transduction response regulator, receiver domain CDG55_11255 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDG55_11255 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal CDG55_11255 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDG55_11255 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_11255 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_11255 IPR025201 Sensor protein KdpD, transmembrane domain CDG55_11255 IPR005467 Histidine kinase domain CDG55_11255 IPR038318 KdpD, transmembrane domain superfamily CDG55_11255 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDG55_11255 IPR003018 GAF domain CDG55_11255 IPR029016 GAF-like domain superfamily CDG55_11260 IPR003820 Potassium-transporting ATPase C chain CDG55_11265 IPR036412 HAD-like superfamily CDG55_11265 IPR023298 P-type ATPase, transmembrane domain superfamily CDG55_11265 IPR018303 P-type ATPase, phosphorylation site CDG55_11265 IPR008250 P-type ATPase, A domain superfamily CDG55_11265 IPR023299 P-type ATPase, cytoplasmic domain N CDG55_11265 IPR001757 P-type ATPase CDG55_11265 IPR006391 P-type ATPase, B chain, subfamily IA CDG55_11270 IPR023298 P-type ATPase, transmembrane domain superfamily CDG55_11270 IPR004623 Potassium-transporting ATPase A chain CDG55_11280 IPR036412 HAD-like superfamily CDG55_11280 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein CDG55_11280 IPR023214 HAD superfamily CDG55_11285 IPR002500 Phosphoadenosine phosphosulphate reductase CDG55_11285 IPR011798 Adenosine 5'-phosphosulphate reductase CDG55_11285 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase CDG55_11285 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_11290 IPR009721 O-acyltransferase WSD1, C-terminal CDG55_11290 IPR004255 O-acyltransferase, WSD1, N-terminal CDG55_11290 IPR014292 Acyltransferase, WS/DGAT/MGAT CDG55_11300 IPR003029 S1 domain CDG55_11300 IPR022967 RNA-binding domain, S1 CDG55_11300 IPR004659 Ribonuclease E/G CDG55_11300 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CDG55_11300 IPR012340 Nucleic acid-binding, OB-fold CDG55_11305 IPR029001 Inosine triphosphate pyrophosphatase-like CDG55_11305 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CDG55_11315 IPR007221 Rod shape-determining protein MreC CDG55_11315 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 CDG55_11315 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 CDG55_11320 IPR004753 Cell shape determining protein MreB CDG55_11325 IPR003837 Glu-tRNAGln amidotransferase C subunit CDG55_11325 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C CDG55_11330 IPR000120 Amidase CDG55_11330 IPR020556 Amidase, conserved site CDG55_11330 IPR023631 Amidase signature domain CDG55_11330 IPR036928 Amidase signature (AS) superfamily CDG55_11330 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CDG55_11335 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 CDG55_11335 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E CDG55_11335 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic CDG55_11335 IPR018027 Asn/Gln amidotransferase CDG55_11335 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit CDG55_11335 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like CDG55_11335 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site CDG55_11335 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CDG55_11335 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 CDG55_11355 IPR036640 ABC transporter type 1, transmembrane domain superfamily CDG55_11355 IPR009248 SbmA/BacA-like CDG55_11360 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG55_11360 IPR001423 Lysophospholipase patatin, conserved site CDG55_11360 IPR002641 Patatin-like phospholipase domain CDG55_11365 IPR001463 Sodium:alanine symporter CDG55_11370 IPR004445 Sodium/glutamate symport carrier protein GltS CDG55_11380 IPR029479 Nitroreductase CDG55_11380 IPR000415 Nitroreductase-like CDG55_11385 IPR004734 Multidrug resistance protein CDG55_11385 IPR036259 MFS transporter superfamily CDG55_11385 IPR020846 Major facilitator superfamily domain CDG55_11385 IPR011701 Major facilitator superfamily CDG55_11385 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CDG55_11390 IPR010020 Integral membrane protein, YccS/YhfK CDG55_11390 IPR010019 Integral membrane protein, YccS CDG55_11390 IPR032692 Integral membrane protein YccS, N-terminal CDG55_11400 IPR017938 Riboflavin synthase-like beta-barrel CDG55_11400 IPR008254 Flavodoxin/nitric oxide synthase CDG55_11400 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDG55_11400 IPR029039 Flavoprotein-like superfamily CDG55_11400 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG55_11400 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily CDG55_11400 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDG55_11400 IPR001094 Flavodoxin-like CDG55_11400 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria CDG55_11400 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain CDG55_11400 IPR017927 FAD-binding domain, ferredoxin reductase-type CDG55_11400 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding CDG55_11445 IPR038063 L,D-transpeptidase catalytic domain-like CDG55_11445 IPR041597 L,D-transpeptidase C-terminal domain CDG55_11445 IPR005490 L,D-transpeptidase catalytic domain CDG55_11450 IPR007401 Protein of unknown function DUF454 CDG55_11460 IPR012556 Entericidin A/B CDG55_11465 IPR011650 Peptidase M20, dimerisation domain CDG55_11465 IPR002933 Peptidase M20 CDG55_11465 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CDG55_11465 IPR036264 Bacterial exopeptidase dimerisation domain CDG55_11475 IPR005467 Histidine kinase domain CDG55_11475 IPR036641 HPT domain superfamily CDG55_11475 IPR036061 CheW-like domain superfamily CDG55_11475 IPR011006 CheY-like superfamily CDG55_11475 IPR002545 CheW-like domain CDG55_11475 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDG55_11475 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDG55_11475 IPR001789 Signal transduction response regulator, receiver domain CDG55_11475 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_11475 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_11480 IPR003660 HAMP domain CDG55_11480 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDG55_11480 IPR004090 Chemotaxis methyl-accepting receptor CDG55_11480 IPR029095 NarX-like, N-terminal CDG55_11485 IPR002545 CheW-like domain CDG55_11485 IPR036061 CheW-like domain superfamily CDG55_11485 IPR039315 Chemotaxis protein CheW CDG55_11490 IPR001789 Signal transduction response regulator, receiver domain CDG55_11490 IPR011006 CheY-like superfamily CDG55_11495 IPR001789 Signal transduction response regulator, receiver domain CDG55_11495 IPR011006 CheY-like superfamily CDG55_11505 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CDG55_11505 IPR004154 Anticodon-binding CDG55_11505 IPR002316 Proline-tRNA ligase, class IIa CDG55_11505 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CDG55_11505 IPR006195 Aminoacyl-tRNA synthetase, class II CDG55_11505 IPR036621 Anticodon-binding domain superfamily CDG55_11505 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CDG55_11505 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CDG55_11505 IPR033730 Prokaryote proline-tRNA ligase core domain CDG55_11505 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CDG55_11510 IPR013987 PhnA protein, N-terminal CDG55_11510 IPR013988 PhnA protein, C-terminal CDG55_11510 IPR004624 PhnA protein CDG55_11530 IPR017703 YgfZ/GcvT conserved site CDG55_11530 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CDG55_11530 IPR006222 Aminomethyltransferase, folate-binding domain CDG55_11530 IPR028896 Aminomethyltransferase-like CDG55_11555 IPR010663 Zinc finger, FPG/IleRS-type CDG55_11555 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type CDG55_11555 IPR010979 Ribosomal protein S13-like, H2TH CDG55_11555 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CDG55_11555 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain CDG55_11555 IPR020629 Formamidopyrimidine-DNA glycosylase CDG55_11555 IPR035937 MutM-like, N-terminal CDG55_11560 IPR015391 SurA N-terminal CDG55_11560 IPR027304 Trigger factor/SurA domain superfamily CDG55_11560 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CDG55_11560 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CDG55_11560 IPR023034 Peptidyl-prolyl isomerase SurA CDG55_11570 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CDG55_11570 IPR036019 Gated mechanosensitive channel CDG55_11570 IPR001185 Large-conductance mechanosensitive channel CDG55_11570 IPR019823 Large-conductance mechanosensitive channel, conserved site CDG55_11580 IPR006042 Xanthine/uracil permease CDG55_11580 IPR006043 Xanthine/uracil/vitamin C permease CDG55_11585 IPR013675 Methyltransferase small, N-terminal CDG55_11585 IPR023543 rRNA small subunit methyltransferase C CDG55_11585 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDG55_11585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_11585 IPR007848 Methyltransferase small domain CDG55_11590 IPR004841 Amino acid permease/ SLC12A domain CDG55_11590 IPR004840 Amino acid permease, conserved site CDG55_11595 IPR036025 tRNA-splicing ligase RtcB-like superfamily CDG55_11595 IPR001233 tRNA-splicing ligase, RtcB CDG55_11600 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG55_11600 IPR027385 Outer membrane protein beta-barrel domain CDG55_11600 IPR006664 Outer membrane protein, bacterial CDG55_11600 IPR006665 OmpA-like domain CDG55_11600 IPR036737 OmpA-like domain superfamily CDG55_11610 IPR020616 Thiolase, N-terminal CDG55_11610 IPR020613 Thiolase, conserved site CDG55_11610 IPR020617 Thiolase, C-terminal CDG55_11610 IPR020610 Thiolase, active site CDG55_11610 IPR002155 Thiolase CDG55_11610 IPR016039 Thiolase-like CDG55_11610 IPR020615 Thiolase, acyl-enzyme intermediate active site CDG55_11620 IPR000390 Small multidrug resistance protein family CDG55_11630 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CDG55_11630 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CDG55_11630 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CDG55_11630 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CDG55_11640 IPR023606 CoA-transferase family III domain superfamily CDG55_11640 IPR003673 CoA-transferase family III CDG55_11645 IPR003313 AraC-type arabinose-binding/dimerisation domain CDG55_11645 IPR037923 Transcription regulator HTH-like CDG55_11645 IPR018060 DNA binding HTH domain, AraC-type CDG55_11645 IPR018062 HTH domain AraC-type, conserved site CDG55_11645 IPR020449 Transcription regulator HTH, AraC- type CDG55_11645 IPR009057 Homeobox-like domain superfamily CDG55_11650 IPR002155 Thiolase CDG55_11650 IPR016039 Thiolase-like CDG55_11650 IPR020610 Thiolase, active site CDG55_11650 IPR020615 Thiolase, acyl-enzyme intermediate active site CDG55_11650 IPR020616 Thiolase, N-terminal CDG55_11650 IPR020613 Thiolase, conserved site CDG55_11650 IPR020617 Thiolase, C-terminal CDG55_11655 IPR036291 NAD(P)-binding domain superfamily CDG55_11655 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDG55_11655 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDG55_11655 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDG55_11655 IPR029045 ClpP/crotonase-like domain superfamily CDG55_11655 IPR001753 Enoyl-CoA hydratase/isomerase CDG55_11655 IPR012802 Fatty oxidation complex, alpha subunit FadJ CDG55_11680 IPR016181 Acyl-CoA N-acyltransferase CDG55_11680 IPR000182 GNAT domain CDG55_11680 IPR039143 Glucosamine 6-phosphate N-acetyltransferase CDG55_11690 IPR005744 Hly-III CDG55_11690 IPR004254 AdipoR/Haemolysin-III-related CDG55_11695 IPR036259 MFS transporter superfamily CDG55_11695 IPR005828 Major facilitator, sugar transporter-like CDG55_11695 IPR020846 Major facilitator superfamily domain CDG55_11695 IPR005829 Sugar transporter, conserved site CDG55_11695 IPR011701 Major facilitator superfamily CDG55_11695 IPR004736 MFS transporter, metabolite:H symporter CDG55_11710 IPR036670 SecA, preprotein cross-linking domain superfamily CDG55_11710 IPR036266 SecA, Wing/Scaffold superfamily CDG55_11710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_11710 IPR011115 SecA DEAD-like, N-terminal CDG55_11710 IPR020937 SecA conserved site CDG55_11710 IPR000185 Protein translocase subunit SecA CDG55_11710 IPR004027 SEC-C motif CDG55_11710 IPR014018 SecA motor DEAD CDG55_11710 IPR011130 SecA, preprotein cross-linking domain CDG55_11710 IPR011116 SecA Wing/Scaffold CDG55_11715 IPR022915 Peroxiredoxin, TDXH subfamily CDG55_11715 IPR013766 Thioredoxin domain CDG55_11715 IPR036249 Thioredoxin-like superfamily CDG55_11715 IPR019479 Peroxiredoxin, C-terminal CDG55_11715 IPR024706 Peroxiredoxin, AhpC-type CDG55_11715 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDG55_11720 IPR001279 Metallo-beta-lactamase CDG55_11720 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG55_11740 IPR018109 Folylpolyglutamate synthetase, conserved site CDG55_11740 IPR001645 Folylpolyglutamate synthetase CDG55_11740 IPR013221 Mur ligase, central CDG55_11740 IPR036615 Mur ligase, C-terminal domain superfamily CDG55_11740 IPR036565 Mur-like, catalytic domain superfamily CDG55_11745 IPR029045 ClpP/crotonase-like domain superfamily CDG55_11745 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CDG55_11745 IPR034733 Acetyl-CoA carboxylase CDG55_11745 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CDG55_11750 IPR011060 Ribulose-phosphate binding barrel CDG55_11750 IPR002028 Tryptophan synthase, alpha chain CDG55_11750 IPR013785 Aldolase-type TIM barrel CDG55_11750 IPR018204 Tryptophan synthase, alpha chain, active site CDG55_11775 IPR001789 Signal transduction response regulator, receiver domain CDG55_11775 IPR011006 CheY-like superfamily CDG55_11775 IPR029787 Nucleotide cyclase CDG55_11775 IPR000160 GGDEF domain CDG55_11780 IPR023026 Tryptophan synthase beta chain/beta chain-like CDG55_11780 IPR006654 Tryptophan synthase, beta chain CDG55_11780 IPR006653 Tryptophan synthase, beta chain, conserved site CDG55_11780 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG55_11780 IPR001926 Pyridoxal-phosphate dependent enzyme CDG55_11785 IPR013785 Aldolase-type TIM barrel CDG55_11785 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) CDG55_11785 IPR011060 Ribulose-phosphate binding barrel CDG55_11790 IPR000531 TonB-dependent receptor-like, beta-barrel CDG55_11790 IPR012910 TonB-dependent receptor, plug domain CDG55_11790 IPR010917 TonB-dependent receptor, conserved site CDG55_11790 IPR010101 TonB-dependent vitamin B12 transporter BtuB CDG55_11790 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG55_11790 IPR037066 TonB-dependent receptor, plug domain superfamily CDG55_11790 IPR039426 Vitamin B12 transporter BtuB-like CDG55_11795 IPR016030 Cobalamin adenosyltransferase-like CDG55_11795 IPR036451 Cobalamin adenosyltransferase-like superfamily CDG55_11795 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type CDG55_11815 IPR003846 Protein adenylyltransferase SelO CDG55_11820 IPR039420 Transcriptional regulatory protein WalR-like CDG55_11820 IPR016032 Signal transduction response regulator, C-terminal effector CDG55_11820 IPR011006 CheY-like superfamily CDG55_11820 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_11820 IPR001789 Signal transduction response regulator, receiver domain CDG55_11820 IPR001867 OmpR/PhoB-type DNA-binding domain CDG55_11825 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDG55_11825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDG55_11825 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDG55_11825 IPR005467 Histidine kinase domain CDG55_11825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_11825 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_11825 IPR003660 HAMP domain CDG55_11835 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDG55_11835 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDG55_11835 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDG55_11835 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDG55_11835 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDG55_11835 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDG55_11835 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDG55_11840 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDG55_11840 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDG55_11840 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDG55_11840 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDG55_11840 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDG55_11840 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDG55_11840 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDG55_11845 IPR009315 Phosphate-starvation-induced PsiE CDG55_11845 IPR020948 Phosphate-starvation-induced PsiE-like CDG55_11870 IPR000531 TonB-dependent receptor-like, beta-barrel CDG55_11870 IPR037066 TonB-dependent receptor, plug domain superfamily CDG55_11870 IPR039426 Vitamin B12 transporter BtuB-like CDG55_11870 IPR012910 TonB-dependent receptor, plug domain CDG55_11880 IPR006195 Aminoacyl-tRNA synthetase, class II CDG55_11880 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CDG55_11880 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CDG55_11880 IPR029351 GAD domain CDG55_11880 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CDG55_11880 IPR004524 Aspartate-tRNA ligase, type 1 CDG55_11880 IPR004115 GAD-like domain superfamily CDG55_11880 IPR012340 Nucleic acid-binding, OB-fold CDG55_11895 IPR015899 UDP-galactopyranose mutase, C-terminal CDG55_11895 IPR004379 UDP-galactopyranose mutase CDG55_11920 IPR031358 Stealth protein CR1, conserved region 1 CDG55_11920 IPR031356 Stealth protein CR4, conserved region 4 CDG55_11920 IPR031357 Stealth protein CR3, conserved region 3 CDG55_11920 IPR021520 Stealth protein CR2, conserved region 2 CDG55_11930 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDG55_11930 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CDG55_11930 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CDG55_11930 IPR036291 NAD(P)-binding domain superfamily CDG55_11930 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CDG55_11930 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CDG55_11930 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CDG55_11930 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CDG55_11935 IPR005785 Branched-chain amino acid aminotransferase I CDG55_11935 IPR018300 Aminotransferase, class IV, conserved site CDG55_11935 IPR033939 Branched-chain aminotransferase CDG55_11935 IPR036038 Aminotransferase-like, PLP-dependent enzymes CDG55_11935 IPR001544 Aminotransferase class IV CDG55_11940 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain CDG55_11940 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CDG55_11940 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme CDG55_11945 IPR000700 PAS-associated, C-terminal CDG55_11945 IPR000014 PAS domain CDG55_11945 IPR001610 PAC motif CDG55_11945 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDG55_11945 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDG55_11945 IPR005467 Histidine kinase domain CDG55_11945 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_11945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDG55_11945 IPR035965 PAS domain superfamily CDG55_11945 IPR003660 HAMP domain CDG55_11945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_11950 IPR006120 Resolvase, HTH domain CDG55_11950 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CDG55_11950 IPR006119 Resolvase, N-terminal catalytic domain CDG55_11950 IPR006118 Recombinase, conserved site CDG55_12005 IPR025166 Integrase, DNA-binding domain CDG55_12005 IPR038488 Integrase, DNA-binding domain superfamily CDG55_12005 IPR002104 Integrase, catalytic domain CDG55_12005 IPR013762 Integrase-like, catalytic domain superfamily CDG55_12005 IPR010998 Integrase/recombinase, N-terminal CDG55_12005 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDG55_12015 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CDG55_12015 IPR042118 QueA, domain 1 CDG55_12015 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily CDG55_12015 IPR042119 QueA, domain 2 CDG55_12030 IPR002616 tRNA-guanine(15) transglycosylase-like CDG55_12030 IPR004803 tRNA-guanine transglycosylase CDG55_12030 IPR036511 Queuine tRNA-ribosyltransferase-like CDG55_12035 IPR003849 Preprotein translocase YajC CDG55_12040 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDG55_12040 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CDG55_12040 IPR005791 Protein translocase subunit SecD CDG55_12040 IPR027398 SecD export protein N-terminal TM domain CDG55_12040 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CDG55_12045 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDG55_12045 IPR005665 Protein-export membrane protein SecF, bacterial CDG55_12045 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CDG55_12045 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CDG55_12055 IPR031166 EngA-type guanine nucleotide-binding (G) domain CDG55_12055 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_12055 IPR005225 Small GTP-binding protein domain CDG55_12055 IPR015946 K homology domain-like, alpha/beta CDG55_12055 IPR032859 GTPase Der, C-terminal KH-domain-like CDG55_12055 IPR006073 GTP binding domain CDG55_12055 IPR016484 GTP-binding protein EngA CDG55_12060 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG55_12060 IPR002372 Pyrrolo-quinoline quinone repeat CDG55_12060 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDG55_12060 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CDG55_12060 IPR017687 Outer membrane protein assembly factor BamB CDG55_12070 IPR036621 Anticodon-binding domain superfamily CDG55_12070 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CDG55_12070 IPR015807 Histidine-tRNA ligase CDG55_12070 IPR006195 Aminoacyl-tRNA synthetase, class II CDG55_12070 IPR004154 Anticodon-binding CDG55_12070 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CDG55_12075 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CDG55_12075 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CDG55_12075 IPR011005 Dihydropteroate synthase-like CDG55_12090 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CDG55_12090 IPR013785 Aldolase-type TIM barrel CDG55_12090 IPR007197 Radical SAM CDG55_12090 IPR040072 Methyltransferase (Class A) CDG55_12090 IPR027492 Dual-specificity RNA methyltransferase RlmN CDG55_12095 IPR001564 Nucleoside diphosphate kinase CDG55_12095 IPR023005 Nucleoside diphosphate kinase, active site CDG55_12095 IPR034907 Nucleoside diphosphate kinase-like domain CDG55_12095 IPR036850 Nucleoside diphosphate kinase-like domain superfamily CDG55_12100 IPR036762 IscX-like superfamily CDG55_12100 IPR007479 ISC system FeS cluster assembly, IscX CDG55_12105 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG55_12105 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDG55_12110 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CDG55_12110 IPR001296 Glycosyl transferase, family 1 CDG55_12115 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CDG55_12115 IPR029052 Metallo-dependent phosphatase-like CDG55_12115 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) CDG55_12120 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CDG55_12120 IPR011530 Ribosomal RNA adenine dimethylase CDG55_12120 IPR023165 rRNA adenine dimethylase-like CDG55_12120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_12120 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CDG55_12120 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CDG55_12125 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase CDG55_12125 IPR005255 PdxA family CDG55_12135 IPR036899 Ribosomal protein L13 superfamily CDG55_12135 IPR005823 Ribosomal protein L13, bacterial-type CDG55_12135 IPR005822 Ribosomal protein L13 CDG55_12140 IPR023035 Ribosomal protein S9, bacterial/plastid CDG55_12140 IPR020574 Ribosomal protein S9, conserved site CDG55_12140 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_12140 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG55_12140 IPR000754 Ribosomal protein S9 CDG55_12145 IPR036249 Thioredoxin-like superfamily CDG55_12145 IPR004046 Glutathione S-transferase, C-terminal CDG55_12145 IPR004045 Glutathione S-transferase, N-terminal CDG55_12145 IPR040079 Glutathione Transferase family CDG55_12145 IPR010987 Glutathione S-transferase, C-terminal-like CDG55_12145 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG55_12145 IPR034341 Stringent starvation protein A, N-terminal CDG55_12150 IPR007481 Stringent starvation protein B CDG55_12150 IPR036760 SspB-like superfamily CDG55_12180 IPR005482 Biotin carboxylase, C-terminal CDG55_12180 IPR001882 Biotin-binding site CDG55_12180 IPR011761 ATP-grasp fold CDG55_12180 IPR005481 Biotin carboxylase-like, N-terminal domain CDG55_12180 IPR000089 Biotin/lipoyl attachment CDG55_12180 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDG55_12180 IPR016185 Pre-ATP-grasp domain superfamily CDG55_12180 IPR011054 Rudiment single hybrid motif CDG55_12180 IPR011053 Single hybrid motif CDG55_12180 IPR011764 Biotin carboxylation domain CDG55_12190 IPR006675 HDIG domain CDG55_12190 IPR037522 HD-GYP domain CDG55_12190 IPR006674 HD domain CDG55_12190 IPR003607 HD/PDEase domain CDG55_12195 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDG55_12195 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDG55_12195 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDG55_12195 IPR006089 Acyl-CoA dehydrogenase, conserved site CDG55_12195 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDG55_12195 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDG55_12195 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDG55_12200 IPR034733 Acetyl-CoA carboxylase CDG55_12200 IPR029045 ClpP/crotonase-like domain superfamily CDG55_12200 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CDG55_12200 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CDG55_12205 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_12205 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDG55_12205 IPR036291 NAD(P)-binding domain superfamily CDG55_12205 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDG55_12215 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG55_12215 IPR009057 Homeobox-like domain superfamily CDG55_12215 IPR001647 DNA-binding HTH domain, TetR-type CDG55_12215 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal CDG55_12240 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDG55_12240 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDG55_12240 IPR006089 Acyl-CoA dehydrogenase, conserved site CDG55_12240 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDG55_12240 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDG55_12240 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDG55_12240 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDG55_12245 IPR006089 Acyl-CoA dehydrogenase, conserved site CDG55_12245 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDG55_12245 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDG55_12245 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDG55_12245 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDG55_12245 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDG55_12245 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDG55_12290 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase CDG55_12290 IPR000462 CDP-alcohol phosphatidyltransferase CDG55_12295 IPR007473 Ribosomal RNA large subunit methyltransferase J CDG55_12295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_12295 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDG55_12315 IPR022383 Lactate/malate dehydrogenase, C-terminal CDG55_12315 IPR001557 L-lactate/malate dehydrogenase CDG55_12315 IPR001236 Lactate/malate dehydrogenase, N-terminal CDG55_12315 IPR036291 NAD(P)-binding domain superfamily CDG55_12315 IPR010945 Malate dehydrogenase, type 2 CDG55_12315 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CDG55_12325 IPR008258 Transglycosylase SLT domain 1 CDG55_12325 IPR000189 Prokaryotic transglycosylase, active site CDG55_12325 IPR011055 Duplicated hybrid motif CDG55_12325 IPR023346 Lysozyme-like domain superfamily CDG55_12325 IPR016047 Peptidase M23 CDG55_12325 IPR010090 Phage tail tape measure protein CDG55_12330 IPR020612 Methylthiotransferase, conserved site CDG55_12330 IPR013848 Methylthiotransferase, N-terminal CDG55_12330 IPR002792 TRAM domain CDG55_12330 IPR023404 Radical SAM, alpha/beta horseshoe CDG55_12330 IPR005839 Methylthiotransferase CDG55_12330 IPR006638 Elp3/MiaB/NifB CDG55_12330 IPR007197 Radical SAM CDG55_12330 IPR038135 Methylthiotransferase, N-terminal domain superfamily CDG55_12330 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB CDG55_12335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_12335 IPR003714 PhoH-like protein CDG55_12340 IPR023091 Metalloprotease catalytic domain superfamily, predicted CDG55_12340 IPR020549 Endoribonuclease YbeY, conserved site CDG55_12340 IPR002036 Endoribonuclease YbeY CDG55_12365 IPR010079 Xanthine phosphoribosyltransferase CDG55_12365 IPR029057 Phosphoribosyltransferase-like CDG55_12365 IPR000836 Phosphoribosyltransferase domain CDG55_12370 IPR015315 Protein of unknown function DUF1963 CDG55_12370 IPR035948 YwqG-like superfamily CDG55_12375 IPR000398 Thymidylate synthase CDG55_12375 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CDG55_12375 IPR020940 Thymidylate synthase, active site CDG55_12375 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily CDG55_12380 IPR024072 Dihydrofolate reductase-like domain superfamily CDG55_12380 IPR017925 Dihydrofolate reductase conserved site CDG55_12380 IPR001796 Dihydrofolate reductase domain CDG55_12380 IPR012259 Dihydrofolate reductase CDG55_12390 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CDG55_12390 IPR002569 Peptide methionine sulphoxide reductase MsrA CDG55_12400 IPR002898 MotA/TolQ/ExbB proton channel CDG55_12410 IPR036477 Formyl transferase, N-terminal domain superfamily CDG55_12410 IPR002912 ACT domain CDG55_12410 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CDG55_12410 IPR004810 Formyltetrahydrofolate deformylase CDG55_12410 IPR002376 Formyl transferase, N-terminal CDG55_12415 IPR013571 Transcription regulator QacR, C-terminal CDG55_12415 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDG55_12415 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG55_12415 IPR009057 Homeobox-like domain superfamily CDG55_12415 IPR001647 DNA-binding HTH domain, TetR-type CDG55_12420 IPR016163 Aldehyde dehydrogenase, C-terminal CDG55_12420 IPR015590 Aldehyde dehydrogenase domain CDG55_12420 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CDG55_12420 IPR016162 Aldehyde dehydrogenase, N-terminal CDG55_12420 IPR016161 Aldehyde/histidinol dehydrogenase CDG55_12420 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDG55_12425 IPR034704 L28p-like CDG55_12425 IPR026569 Ribosomal protein L28/L24 CDG55_12425 IPR037147 Ribosomal protein L28/L24 superfamily CDG55_12425 IPR001383 Ribosomal protein L28 CDG55_12430 IPR011332 Zinc-binding ribosomal protein CDG55_12430 IPR018264 Ribosomal protein L33, conserved site CDG55_12430 IPR001705 Ribosomal protein L33 CDG55_12430 IPR038584 Ribosomal protein L33 superfamily CDG55_12435 IPR003148 Regulator of K+ conductance, N-terminal CDG55_12435 IPR006153 Cation/H+ exchanger CDG55_12435 IPR004771 K+/H+ exchanger CDG55_12435 IPR038770 Sodium/solute symporter superfamily CDG55_12435 IPR036291 NAD(P)-binding domain superfamily CDG55_12445 IPR035587 DUS-like, FMN-binding domain CDG55_12445 IPR004653 tRNA-dihydrouridine(20/20a) synthase CDG55_12445 IPR001269 tRNA-dihydrouridine synthase CDG55_12445 IPR018517 tRNA-dihydrouridine synthase, conserved site CDG55_12445 IPR013785 Aldolase-type TIM barrel CDG55_12460 IPR000594 THIF-type NAD/FAD binding fold CDG55_12460 IPR035985 Ubiquitin-activating enzyme CDG55_12470 IPR015991 Uncharacterised hydrolase TatD-type CDG55_12470 IPR001130 TatD family CDG55_12470 IPR032466 Metal-dependent hydrolase CDG55_12470 IPR018228 Deoxyribonuclease, TatD-related, conserved site CDG55_12475 IPR017219 Peptidoglycan GlcNAc deacetylase CDG55_12475 IPR037126 PdaC/RsiV-like superfamily CDG55_12475 IPR025303 Deacetylase PdaC CDG55_12475 IPR002509 NodB homology domain CDG55_12475 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDG55_12475 IPR021729 Domain of unknown function DUF3298 CDG55_12485 IPR032090 Peptide chain release factor 3, C-terminal CDG55_12485 IPR004548 Peptide chain release factor 3 CDG55_12485 IPR031157 Tr-type G domain, conserved site CDG55_12485 IPR004161 Translation elongation factor EFTu-like, domain 2 CDG55_12485 IPR035647 EF-G domain III/V-like CDG55_12485 IPR041732 Peptide chain release factor 3, GTP-binding domain CDG55_12485 IPR005225 Small GTP-binding protein domain CDG55_12485 IPR000795 Transcription factor, GTP-binding domain CDG55_12485 IPR009000 Translation protein, beta-barrel domain superfamily CDG55_12485 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CDG55_12485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_12490 IPR036597 Fido-like domain superfamily CDG55_12490 IPR025758 Fic/DOC N-terminal CDG55_12490 IPR026287 Protein adenylyltransferase SoFic-like CDG55_12490 IPR003812 Fido domain CDG55_12490 IPR040198 Fido domain-containing protein CDG55_12505 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class CDG55_12505 IPR041405 Type III R-M EcoP15I, C-terminal CDG55_12505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_12505 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDG55_12505 IPR002941 DNA methylase N-4/N-6 CDG55_12640 IPR039423 TonB-dependent receptor-like CDG55_12640 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG55_12640 IPR010105 TonB-dependent siderophore receptor CDG55_12640 IPR000531 TonB-dependent receptor-like, beta-barrel CDG55_12640 IPR030148 Catecholate siderophore receptor Fiu CDG55_12640 IPR012910 TonB-dependent receptor, plug domain CDG55_12640 IPR037066 TonB-dependent receptor, plug domain superfamily CDG55_12645 IPR005025 NADPH-dependent FMN reductase-like CDG55_12645 IPR029039 Flavoprotein-like superfamily CDG55_12645 IPR014063 Arsenate resistance ArsH CDG55_12650 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 CDG55_12650 IPR004706 Arsenical-resistance protein Acr3 CDG55_12650 IPR038770 Sodium/solute symporter superfamily CDG55_12660 IPR011991 ArsR-like helix-turn-helix domain CDG55_12660 IPR001845 HTH ArsR-type DNA-binding domain CDG55_12660 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_12660 IPR036390 Winged helix DNA-binding domain superfamily CDG55_12665 IPR036249 Thioredoxin-like superfamily CDG55_12665 IPR006660 Arsenate reductase-like CDG55_12665 IPR006659 Arsenate reductase CDG55_12670 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit CDG55_12670 IPR000073 Alpha/beta hydrolase fold-1 CDG55_12670 IPR029058 Alpha/Beta hydrolase fold CDG55_12675 IPR000160 GGDEF domain CDG55_12675 IPR005330 MHYT domain CDG55_12675 IPR001633 EAL domain CDG55_12675 IPR035919 EAL domain superfamily CDG55_12675 IPR029787 Nucleotide cyclase CDG55_12680 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDG55_12680 IPR036291 NAD(P)-binding domain superfamily CDG55_12680 IPR000506 Ketol-acid reductoisomerase, C-terminal CDG55_12680 IPR013023 Ketol-acid reductoisomerase CDG55_12680 IPR014359 Ketol-acid reductoisomerase, prokaryotic CDG55_12680 IPR013116 Ketol-acid reductoisomerase, N-terminal CDG55_12685 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CDG55_12685 IPR002912 ACT domain CDG55_12685 IPR004789 Acetolactate synthase, small subunit CDG55_12685 IPR039557 AHAS, ACT domain CDG55_12685 IPR019455 Acetolactate synthase, small subunit, C-terminal CDG55_12690 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDG55_12690 IPR000399 TPP-binding enzyme, conserved site CDG55_12690 IPR012846 Acetolactate synthase, large subunit, biosynthetic CDG55_12690 IPR029061 Thiamin diphosphate-binding fold CDG55_12690 IPR039368 Acetolactate synthase large subunit, TPP binding domain CDG55_12690 IPR012000 Thiamine pyrophosphate enzyme, central domain CDG55_12690 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CDG55_12690 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDG55_12700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_12700 IPR015413 Methionyl/Leucyl tRNA synthetase CDG55_12700 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CDG55_12700 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CDG55_12700 IPR025709 Leucyl-tRNA synthetase, editing domain CDG55_12700 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CDG55_12700 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDG55_12700 IPR002300 Aminoacyl-tRNA synthetase, class Ia CDG55_12700 IPR002302 Leucine-tRNA ligase CDG55_12715 IPR016131 Haemerythrin, iron-binding site CDG55_12715 IPR035938 Hemerythrin-like superfamily CDG55_12715 IPR023504 Bacteriohemerythrin-like protein CDG55_12715 IPR012312 Haemerythrin-like CDG55_12715 IPR012827 Haemerythrin, metal-binding domain CDG55_12720 IPR027546 Sirtuin, class III CDG55_12720 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDG55_12720 IPR026590 Sirtuin family, catalytic core domain CDG55_12720 IPR026591 Sirtuin, catalytic core small domain superfamily CDG55_12720 IPR003000 Sirtuin family CDG55_12725 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG55_12725 IPR030190 Macrolide export protein MacA CDG55_12725 IPR006143 RND efflux pump, membrane fusion protein CDG55_12730 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_12730 IPR017911 ABC transporter, macrolide export, ATP-binding domain CDG55_12730 IPR017871 ABC transporter, conserved site CDG55_12730 IPR025857 MacB-like periplasmic core domain CDG55_12730 IPR003593 AAA+ ATPase domain CDG55_12730 IPR003838 ABC transporter permease protein domain CDG55_12730 IPR003439 ABC transporter-like CDG55_12735 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CDG55_12735 IPR003423 Outer membrane efflux protein CDG55_12745 IPR036291 NAD(P)-binding domain superfamily CDG55_12745 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) CDG55_12745 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_12775 IPR005751 ATP-dependent DNA helicase PcrA CDG55_12775 IPR000212 DNA helicase, UvrD/REP type CDG55_12775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_12775 IPR014016 UvrD-like helicase, ATP-binding domain CDG55_12775 IPR014017 UvrD-like DNA helicase, C-terminal CDG55_12775 IPR013986 DExx box DNA helicase domain superfamily CDG55_12775 IPR034739 UvrD/AddA helicase, N-terminal CDG55_12795 IPR023405 DNA topoisomerase, type IA, core domain CDG55_12795 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CDG55_12795 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CDG55_12795 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CDG55_12795 IPR006171 TOPRIM domain CDG55_12795 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CDG55_12795 IPR000380 DNA topoisomerase, type IA CDG55_12795 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type CDG55_12795 IPR034149 DNA topoisomerase 1, TOPRIM domain CDG55_12795 IPR013497 DNA topoisomerase, type IA, central CDG55_12795 IPR003601 DNA topoisomerase, type IA, domain 2 CDG55_12795 IPR028612 DNA topoisomerase I, type IA CDG55_12795 IPR023406 DNA topoisomerase, type IA, active site CDG55_12795 IPR005733 DNA topoisomerase I, bacterial-type CDG55_12795 IPR013498 DNA topoisomerase, type IA, zn finger CDG55_12820 IPR002589 Macro domain CDG55_12825 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase CDG55_12825 IPR004960 Bacterial lipid A biosynthesis acyltransferase CDG55_12835 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CDG55_12835 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site CDG55_12835 IPR012080 Aspartate-semialdehyde dehydrogenase CDG55_12835 IPR036291 NAD(P)-binding domain superfamily CDG55_12835 IPR000534 Semialdehyde dehydrogenase, NAD-binding CDG55_12835 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type CDG55_12855 IPR020095 Pseudouridine synthase I, TruA, C-terminal CDG55_12855 IPR001406 Pseudouridine synthase I, TruA CDG55_12855 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDG55_12855 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CDG55_12865 IPR006196 RNA-binding domain, S1, IF1 type CDG55_12865 IPR012340 Nucleic acid-binding, OB-fold CDG55_12865 IPR022967 RNA-binding domain, S1 CDG55_12865 IPR004368 Translation initiation factor IF-1 CDG55_12880 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CDG55_12880 IPR004429 Isopropylmalate dehydrogenase CDG55_12880 IPR024084 Isopropylmalate dehydrogenase-like domain CDG55_12890 IPR004431 3-isopropylmalate dehydratase, small subunit CDG55_12890 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDG55_12890 IPR033940 3-isopropylmalate dehydratase, swivel domain CDG55_12890 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CDG55_12895 IPR036008 Aconitase, iron-sulfur domain CDG55_12895 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CDG55_12895 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CDG55_12895 IPR004430 3-isopropylmalate dehydratase, large subunit CDG55_12895 IPR018136 Aconitase family, 4Fe-4S cluster binding site CDG55_12895 IPR033941 3-Isopropylmalate dehydratase, catalytic domain CDG55_12905 IPR005119 LysR, substrate-binding CDG55_12905 IPR036390 Winged helix DNA-binding domain superfamily CDG55_12905 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_12905 IPR000847 Transcription regulator HTH, LysR CDG55_12935 IPR015797 NUDIX hydrolase-like domain superfamily CDG55_12935 IPR020084 NUDIX hydrolase, conserved site CDG55_12935 IPR000086 NUDIX hydrolase domain CDG55_12935 IPR020476 NUDIX hydrolase CDG55_12935 IPR022927 RNA pyrophosphohydrolase RppH CDG55_12940 IPR008279 PEP-utilising enzyme, mobile domain CDG55_12940 IPR023151 PEP-utilising enzyme, conserved site CDG55_12940 IPR040442 Pyruvate kinase-like domain superfamily CDG55_12940 IPR036618 PtsI, HPr-binding domain superfamily CDG55_12940 IPR008731 Phosphotransferase system, enzyme I N-terminal CDG55_12940 IPR006318 Phosphotransferase system, enzyme I-like CDG55_12940 IPR036637 Phosphohistidine domain superfamily CDG55_12940 IPR003018 GAF domain CDG55_12940 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CDG55_12940 IPR000121 PEP-utilising enzyme, C-terminal CDG55_12940 IPR018274 PEP-utilising enzyme, active site CDG55_12940 IPR029016 GAF-like domain superfamily CDG55_12945 IPR020835 Catalase superfamily CDG55_12945 IPR040333 Catalase, clade 3 CDG55_12945 IPR024708 Catalase active site CDG55_12945 IPR018028 Catalase, mono-functional, haem-containing CDG55_12945 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 CDG55_12945 IPR010582 Catalase immune-responsive domain CDG55_12945 IPR011614 Catalase core domain CDG55_12945 IPR037060 Catalase core domain superfamily CDG55_12945 IPR002226 Catalase haem-binding site CDG55_12960 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG55_12960 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D CDG55_12960 IPR001279 Metallo-beta-lactamase CDG55_12965 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_12965 IPR000847 Transcription regulator HTH, LysR CDG55_12965 IPR036390 Winged helix DNA-binding domain superfamily CDG55_12965 IPR005119 LysR, substrate-binding CDG55_12980 IPR006439 HAD hydrolase, subfamily IA CDG55_12980 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG55_12980 IPR023214 HAD superfamily CDG55_12980 IPR023733 Pyrophosphatase PpaX CDG55_12980 IPR041492 Haloacid dehalogenase-like hydrolase CDG55_12980 IPR036412 HAD-like superfamily CDG55_12985 IPR006145 Pseudouridine synthase, RsuA/RluA CDG55_12985 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CDG55_12985 IPR002942 RNA-binding S4 domain CDG55_12985 IPR036986 RNA-binding S4 domain superfamily CDG55_12985 IPR006225 Pseudouridine synthase, RluC/RluD CDG55_12985 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDG55_12995 IPR021968 Polyribonucleotide phosphorylase C-terminal CDG55_12995 IPR012340 Nucleic acid-binding, OB-fold CDG55_12995 IPR003029 S1 domain CDG55_12995 IPR022967 RNA-binding domain, S1 CDG55_12995 IPR004659 Ribonuclease E/G CDG55_12995 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CDG55_12995 IPR028878 Ribonuclease E CDG55_13000 IPR020845 AMP-binding, conserved site CDG55_13000 IPR025110 AMP-binding enzyme, C-terminal domain CDG55_13000 IPR000873 AMP-dependent synthetase/ligase CDG55_13000 IPR042099 AMP-dependent synthetase-like superfamily CDG55_13000 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 CDG55_13015 IPR010723 HemN, C-terminal CDG55_13015 IPR004559 Heme chaperone HemW-like CDG55_13015 IPR007197 Radical SAM CDG55_13015 IPR023404 Radical SAM, alpha/beta horseshoe CDG55_13015 IPR034505 Anaerobic coproporphyrinogen-III oxidase CDG55_13015 IPR006638 Elp3/MiaB/NifB CDG55_13025 IPR002528 Multi antimicrobial extrusion protein CDG55_13030 IPR000719 Protein kinase domain CDG55_13030 IPR011009 Protein kinase-like domain superfamily CDG55_13030 IPR004147 UbiB domain CDG55_13035 IPR042105 Ribosomal protein L31 superfamily CDG55_13035 IPR027493 Ribosomal protein L31 type B CDG55_13035 IPR002150 Ribosomal protein L31 CDG55_13035 IPR034704 L28p-like CDG55_13045 IPR003691 Putative fluoride ion transporter CrcB CDG55_13065 IPR002563 Flavin reductase like domain CDG55_13065 IPR012349 FMN-binding split barrel CDG55_13085 IPR005584 DNA gyrase inhibitor YacG CDG55_13085 IPR013088 Zinc finger, NHR/GATA-type CDG55_13090 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG55_13090 IPR001279 Metallo-beta-lactamase CDG55_13095 IPR019772 Ferrochelatase, active site CDG55_13095 IPR001015 Ferrochelatase CDG55_13095 IPR033644 Ferrochelatase, C-terminal CDG55_13095 IPR033659 Ferrochelatase, N-terminal CDG55_13105 IPR018187 Asp/Glu racemase, active site 1 CDG55_13105 IPR015942 Asp/Glu/hydantoin racemase CDG55_13105 IPR033134 Asp/Glu racemase, active site 2 CDG55_13105 IPR004391 Glutamate racemase CDG55_13105 IPR001920 Asp/Glu racemase CDG55_13115 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_13115 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG55_13115 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase CDG55_13130 IPR013324 RNA polymerase sigma factor, region 3/4-like CDG55_13130 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDG55_13130 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CDG55_13130 IPR013325 RNA polymerase sigma factor, region 2 CDG55_13130 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_13130 IPR007627 RNA polymerase sigma-70 region 2 CDG55_13130 IPR014284 RNA polymerase sigma-70 like domain CDG55_13130 IPR039425 RNA polymerase sigma-70 like CDG55_13130 IPR014289 RNA polymerase sigma-24-related CDG55_13140 IPR036237 Xylose isomerase-like superfamily CDG55_13140 IPR007801 Uncharacterised protein family UPF0276 CDG55_13155 IPR001123 Amino acid exporter protein, LeuE-type CDG55_13155 IPR004777 L-lysine exporter/arginine exporter CDG55_13155 IPR023445 Arginine exporter protein ArgO, enterobacteria CDG55_13160 IPR001455 TusA-like domain CDG55_13160 IPR022931 Sulfur carrier protein TusA CDG55_13160 IPR036868 TusA-like domain superfamily CDG55_13165 IPR036318 FAD-binding, type PCMH-like superfamily CDG55_13165 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG55_13165 IPR005170 Transporter-associated domain CDG55_13165 IPR000644 CBS domain CDG55_13170 IPR004563 Apolipoprotein N-acyltransferase CDG55_13170 IPR003010 Carbon-nitrogen hydrolase CDG55_13170 IPR036526 Carbon-nitrogen hydrolase superfamily CDG55_13180 IPR000983 Bacterial general secretion pathway protein G-type pilin CDG55_13180 IPR012902 Prokaryotic N-terminal methylation site CDG55_13180 IPR010054 General secretion pathway protein G CDG55_13180 IPR013545 Type II secretion system protein G CDG55_13185 IPR018076 Type II secretion system F domain CDG55_13185 IPR042094 Type II secretion system F domain superfamily CDG55_13185 IPR003004 GspF/PilC family CDG55_13185 IPR011850 General secretion pathway protein F CDG55_13185 IPR001992 Type II secretion system conserved site CDG55_13190 IPR011545 DEAD/DEAH box helicase domain CDG55_13190 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG55_13190 IPR001650 Helicase, C-terminal CDG55_13190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_13190 IPR005259 Primosomal protein N' CDG55_13190 IPR041222 Primosomal protein N', 3' DNA-binding domain CDG55_13190 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain CDG55_13190 IPR041236 Primosomal protein N, C-terminal domain CDG55_13190 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily CDG55_13195 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG55_13195 IPR010917 TonB-dependent receptor, conserved site CDG55_13195 IPR000531 TonB-dependent receptor-like, beta-barrel CDG55_13195 IPR010105 TonB-dependent siderophore receptor CDG55_13195 IPR037066 TonB-dependent receptor, plug domain superfamily CDG55_13195 IPR012910 TonB-dependent receptor, plug domain CDG55_13195 IPR039423 TonB-dependent receptor-like CDG55_13200 IPR004771 K+/H+ exchanger CDG55_13200 IPR006153 Cation/H+ exchanger CDG55_13200 IPR003148 Regulator of K+ conductance, N-terminal CDG55_13200 IPR036291 NAD(P)-binding domain superfamily CDG55_13200 IPR038770 Sodium/solute symporter superfamily CDG55_13200 IPR020884 Glutathione-regulated potassium-efflux system protein KefB CDG55_13205 IPR016153 Heat shock protein Hsp33, N-terminal CDG55_13205 IPR000397 Heat shock protein Hsp33 CDG55_13205 IPR016154 Heat shock protein Hsp33, C-terminal CDG55_13205 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily CDG55_13210 IPR008971 HSP40/DnaJ peptide-binding CDG55_13210 IPR023859 DNA-binding protein, curved-DNA CDG55_13210 IPR018253 DnaJ domain, conserved site CDG55_13210 IPR002939 Chaperone DnaJ, C-terminal CDG55_13210 IPR036869 Chaperone J-domain superfamily CDG55_13210 IPR001623 DnaJ domain CDG55_13215 IPR022835 Chaperone modulatory protein CbpM CDG55_13220 IPR004488 Magnesium/cobalt transport protein CorA CDG55_13220 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CDG55_13225 IPR036458 Sodium:dicarboxylate symporter superfamily CDG55_13225 IPR018107 Sodium:dicarboxylate symporter, conserved site CDG55_13225 IPR001991 Sodium:dicarboxylate symporter CDG55_13225 IPR023954 C4-dicarboxylate transport protein CDG55_13230 IPR012162 Polyribonucleotide nucleotidyltransferase CDG55_13230 IPR022967 RNA-binding domain, S1 CDG55_13230 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CDG55_13230 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily CDG55_13230 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_13230 IPR003029 S1 domain CDG55_13230 IPR027408 PNPase/RNase PH domain superfamily CDG55_13230 IPR012340 Nucleic acid-binding, OB-fold CDG55_13230 IPR015847 Exoribonuclease, phosphorolytic domain 2 CDG55_13230 IPR004088 K Homology domain, type 1 CDG55_13230 IPR004087 K Homology domain CDG55_13230 IPR036345 Exoribonuclease, PH domain 2 superfamily CDG55_13230 IPR001247 Exoribonuclease, phosphorolytic domain 1 CDG55_13230 IPR036612 K Homology domain, type 1 superfamily CDG55_13235 IPR000589 Ribosomal protein S15 CDG55_13235 IPR005290 Ribosomal protein S15, bacterial-type CDG55_13235 IPR009068 S15/NS1, RNA-binding CDG55_13245 IPR003593 AAA+ ATPase domain CDG55_13245 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain CDG55_13245 IPR006344 RecBCD enzyme subunit RecD CDG55_13245 IPR027785 UvrD-like helicase C-terminal domain CDG55_13245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_13250 IPR000212 DNA helicase, UvrD/REP type CDG55_13250 IPR034739 UvrD/AddA helicase, N-terminal CDG55_13250 IPR014016 UvrD-like helicase, ATP-binding domain CDG55_13250 IPR011335 Restriction endonuclease type II-like CDG55_13250 IPR004586 RecBCD enzyme subunit RecB CDG55_13250 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CDG55_13250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_13250 IPR011604 Exonuclease, phage-type/RecB, C-terminal CDG55_13250 IPR014017 UvrD-like DNA helicase, C-terminal CDG55_13255 IPR011335 Restriction endonuclease type II-like CDG55_13255 IPR041500 RecC, C-terminal CDG55_13255 IPR006697 RecBCD enzyme subunit RecC CDG55_13255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_13255 IPR013986 DExx box DNA helicase domain superfamily CDG55_13265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_13265 IPR022488 Polyphosphate kinase-2-related CDG55_13275 IPR004033 UbiE/COQ5 methyltransferase CDG55_13275 IPR023576 UbiE/COQ5 methyltransferase, conserved site CDG55_13275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_13285 IPR010232 Probable protein kinase UbiB CDG55_13285 IPR004147 UbiB domain CDG55_13285 IPR011009 Protein kinase-like domain superfamily CDG55_13305 IPR026660 Phosphoribosyl-AMP cyclohydrolase CDG55_13305 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CDG55_13305 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily CDG55_13315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_13315 IPR003395 RecF/RecN/SMC, N-terminal CDG55_13315 IPR001238 DNA-binding, RecF CDG55_13315 IPR018078 DNA-binding, RecF, conserved site CDG55_13315 IPR042174 DNA-binding RecF, domain 2 CDG55_13320 IPR025383 Domain of unknown function DUF4040 CDG55_13320 IPR005281 Monovalent cation:proton antiporter, subunit B CDG55_13320 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CDG55_13320 IPR005663 Monovalent cation proton antiporter subunit A CDG55_13320 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CDG55_13320 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CDG55_13325 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CDG55_13325 IPR006673 Mnh complex subunit C1 CDG55_13330 IPR004775 Na(+)/H(+) antiporter subunit D1 CDG55_13330 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CDG55_13340 IPR007208 Na(+)/H(+) antiporter subunit F-like CDG55_13350 IPR015946 K homology domain-like, alpha/beta CDG55_13350 IPR000238 Ribosome-binding factor A CDG55_13350 IPR023799 Ribosome-binding factor A domain superfamily CDG55_13355 IPR009000 Translation protein, beta-barrel domain superfamily CDG55_13355 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CDG55_13355 IPR023115 Translation initiation factor IF- 2, domain 3 CDG55_13355 IPR015760 Translation initiation factor IF- 2 CDG55_13355 IPR006847 Translation initiation factor IF-2, N-terminal CDG55_13355 IPR009061 Putative DNA-binding domain superfamily CDG55_13355 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_13355 IPR000795 Transcription factor, GTP-binding domain CDG55_13355 IPR005225 Small GTP-binding protein domain CDG55_13355 IPR013575 Initiation factor 2 associated domain, bacterial CDG55_13355 IPR000178 Translation initiation factor aIF-2, bacterial-like CDG55_13360 IPR036555 NusA, N-terminal domain superfamily CDG55_13360 IPR030842 Transcription termination/antitermination protein NusA, bacterial CDG55_13360 IPR012340 Nucleic acid-binding, OB-fold CDG55_13360 IPR009019 K homology domain superfamily, prokaryotic type CDG55_13360 IPR015946 K homology domain-like, alpha/beta CDG55_13360 IPR003029 S1 domain CDG55_13360 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical CDG55_13360 IPR013735 Transcription factor NusA, N-terminal CDG55_13360 IPR010214 Transcription termination factor NusA, C-terminal duplication CDG55_13360 IPR010213 Transcription termination factor NusA CDG55_13360 IPR022967 RNA-binding domain, S1 CDG55_13360 IPR025249 KH domain, NusA-like CDG55_13365 IPR035956 RimP, N-terminal domain superfamily CDG55_13365 IPR028989 Ribosome maturation factor RimP, N-terminal CDG55_13365 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CDG55_13365 IPR003728 Ribosome maturation factor RimP CDG55_13365 IPR028998 Ribosome maturation factor RimP, C-terminal CDG55_13385 IPR004692 Preprotein translocase SecG subunit CDG55_13390 IPR000652 Triosephosphate isomerase CDG55_13390 IPR013785 Aldolase-type TIM barrel CDG55_13390 IPR035990 Triosephosphate isomerase superfamily CDG55_13390 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CDG55_13390 IPR020861 Triosephosphate isomerase, active site CDG55_13395 IPR037257 General secretory system II, protein E, N-terminal superfamily CDG55_13395 IPR013374 ATPase, type IV, pilus assembly, PilB CDG55_13395 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_13395 IPR001482 Type II/IV secretion system protein CDG55_13395 IPR007831 General secretory system II, protein E, N-terminal CDG55_13395 IPR042181 Type II secretion system, protein E, N-terminal CDG55_13400 IPR042094 Type II secretion system F domain superfamily CDG55_13400 IPR018076 Type II secretion system F domain CDG55_13400 IPR003004 GspF/PilC family CDG55_13400 IPR001992 Type II secretion system conserved site CDG55_13405 IPR000045 Prepilin type IV endopeptidase, peptidase domain CDG55_13405 IPR014032 Peptidase A24A, prepilin type IV, bacterial CDG55_13405 IPR010627 Peptidase A24A, N-terminal CDG55_13410 IPR001977 Dephospho-CoA kinase CDG55_13410 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_13420 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG55_13420 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CDG55_13420 IPR001537 tRNA/rRNA methyltransferase, SpoU type CDG55_13420 IPR004441 RNA methyltransferase TrmH family CDG55_13420 IPR029064 50S ribosomal protein L30e-like CDG55_13420 IPR029028 Alpha/beta knot methyltransferases CDG55_13420 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CDG55_13425 IPR009664 Pyrimidine/purine nucleoside phosphorylase CDG55_13425 IPR011051 RmlC-like cupin domain superfamily CDG55_13425 IPR014710 RmlC-like jelly roll fold CDG55_13430 IPR004604 DNA recombination/repair protein RecN CDG55_13430 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_13430 IPR003395 RecF/RecN/SMC, N-terminal CDG55_13435 IPR003774 Protein of unknown function UPF0301 CDG55_13440 IPR012337 Ribonuclease H-like superfamily CDG55_13440 IPR005227 Putative pre-16S rRNA nuclease CDG55_13440 IPR006641 YqgF/RNase H-like domain CDG55_13440 IPR037027 YqgF/RNase H-like domain superfamily CDG55_13445 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDG55_13445 IPR006143 RND efflux pump, membrane fusion protein CDG55_13445 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA CDG55_13475 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CDG55_13475 IPR002569 Peptide methionine sulphoxide reductase MsrA CDG55_13485 IPR028427 Peptide methionine sulfoxide reductase CDG55_13485 IPR002579 Peptide methionine sulphoxide reductase MrsB CDG55_13485 IPR011057 Mss4-like superfamily CDG55_13490 IPR014434 Monothiol glutaredoxin CDG55_13490 IPR004480 Monothiol glutaredoxin-related CDG55_13490 IPR036249 Thioredoxin-like superfamily CDG55_13490 IPR002109 Glutaredoxin CDG55_13490 IPR033658 Glutaredoxin, PICOT-like CDG55_13495 IPR002569 Peptide methionine sulphoxide reductase MsrA CDG55_13495 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CDG55_13500 IPR020449 Transcription regulator HTH, AraC- type CDG55_13500 IPR003313 AraC-type arabinose-binding/dimerisation domain CDG55_13500 IPR014710 RmlC-like jelly roll fold CDG55_13500 IPR018062 HTH domain AraC-type, conserved site CDG55_13500 IPR009057 Homeobox-like domain superfamily CDG55_13500 IPR037923 Transcription regulator HTH-like CDG55_13500 IPR018060 DNA binding HTH domain, AraC-type CDG55_13525 IPR002155 Thiolase CDG55_13525 IPR016039 Thiolase-like CDG55_13525 IPR020613 Thiolase, conserved site CDG55_13525 IPR020615 Thiolase, acyl-enzyme intermediate active site CDG55_13525 IPR020616 Thiolase, N-terminal CDG55_13525 IPR012805 Acetyl-CoA C-acyltransferase FadA CDG55_13525 IPR020610 Thiolase, active site CDG55_13525 IPR020617 Thiolase, C-terminal CDG55_13530 IPR036291 NAD(P)-binding domain superfamily CDG55_13530 IPR012799 Fatty oxidation complex, alpha subunit FadB CDG55_13530 IPR001753 Enoyl-CoA hydratase/isomerase CDG55_13530 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDG55_13530 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDG55_13530 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDG55_13530 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDG55_13530 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CDG55_13530 IPR029045 ClpP/crotonase-like domain superfamily CDG55_13550 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CDG55_13550 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial CDG55_13550 IPR000462 CDP-alcohol phosphatidyltransferase CDG55_13560 IPR038476 UvrC homology region 2 superfamily CDG55_13560 IPR035901 GIY-YIG endonuclease superfamily CDG55_13560 IPR000305 GIY-YIG endonuclease CDG55_13560 IPR010994 RuvA domain 2-like CDG55_13560 IPR001943 UVR domain CDG55_13560 IPR036876 UVR domain superfamily CDG55_13560 IPR001162 UvrC family homology region CDG55_13560 IPR004791 UvrABC system, subunit C CDG55_13560 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CDG55_13570 IPR039435 Diguanylate cyclase DosC, globin sensor domain CDG55_13570 IPR000160 GGDEF domain CDG55_13570 IPR009050 Globin-like superfamily CDG55_13570 IPR012292 Globin/Protoglobin CDG55_13570 IPR029787 Nucleotide cyclase CDG55_13575 IPR001753 Enoyl-CoA hydratase/isomerase CDG55_13575 IPR036291 NAD(P)-binding domain superfamily CDG55_13575 IPR012799 Fatty oxidation complex, alpha subunit FadB CDG55_13575 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDG55_13575 IPR029045 ClpP/crotonase-like domain superfamily CDG55_13575 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDG55_13575 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDG55_13575 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDG55_13575 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CDG55_13580 IPR020616 Thiolase, N-terminal CDG55_13580 IPR020613 Thiolase, conserved site CDG55_13580 IPR020617 Thiolase, C-terminal CDG55_13580 IPR020610 Thiolase, active site CDG55_13580 IPR020615 Thiolase, acyl-enzyme intermediate active site CDG55_13580 IPR016039 Thiolase-like CDG55_13580 IPR002155 Thiolase CDG55_13580 IPR012805 Acetyl-CoA C-acyltransferase FadA CDG55_13600 IPR036249 Thioredoxin-like superfamily CDG55_13600 IPR001853 DSBA-like thioredoxin domain CDG55_13620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_13620 IPR037196 HSP90, C-terminal domain CDG55_13620 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_13620 IPR001404 Heat shock protein Hsp90 family CDG55_13620 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_13620 IPR020575 Heat shock protein Hsp90, N-terminal CDG55_13635 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal CDG55_13635 IPR032813 Putative Na+/H+ antiporter, N-terminal CDG55_13655 IPR007083 RNA polymerase Rpb1, domain 4 CDG55_13655 IPR038120 RNA polymerase Rpb1, funnel domain superfamily CDG55_13655 IPR006592 RNA polymerase, N-terminal CDG55_13655 IPR007081 RNA polymerase Rpb1, domain 5 CDG55_13655 IPR000722 RNA polymerase, alpha subunit CDG55_13655 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CDG55_13655 IPR007066 RNA polymerase Rpb1, domain 3 CDG55_13655 IPR042102 RNA polymerase Rpb1, domain 3 superfamily CDG55_13655 IPR007080 RNA polymerase Rpb1, domain 1 CDG55_13660 IPR007641 RNA polymerase Rpb2, domain 7 CDG55_13660 IPR007645 RNA polymerase Rpb2, domain 3 CDG55_13660 IPR037034 RNA polymerase Rpb2, domain 2 superfamily CDG55_13660 IPR007642 RNA polymerase Rpb2, domain 2 CDG55_13660 IPR007644 RNA polymerase, beta subunit, protrusion CDG55_13660 IPR007121 RNA polymerase, beta subunit, conserved site CDG55_13660 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type CDG55_13660 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain CDG55_13660 IPR015712 DNA-directed RNA polymerase, subunit 2 CDG55_13660 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CDG55_13660 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily CDG55_13660 IPR014724 RNA polymerase Rpb2, OB-fold CDG55_13660 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily CDG55_13665 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily CDG55_13665 IPR008932 Ribosomal protein L7/L12, oligomerisation CDG55_13665 IPR013823 Ribosomal protein L7/L12, C-terminal CDG55_13665 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDG55_13665 IPR000206 Ribosomal protein L7/L12 CDG55_13670 IPR001790 Ribosomal protein L10P CDG55_13670 IPR002363 Ribosomal protein L10, eubacterial, conserved site CDG55_13670 IPR022973 Ribosomal protein L10 CDG55_13675 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CDG55_13675 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CDG55_13675 IPR002143 Ribosomal protein L1 CDG55_13675 IPR005878 Ribosomal protein L1, bacterial-type CDG55_13675 IPR023673 Ribosomal protein L1, conserved site CDG55_13675 IPR023674 Ribosomal protein L1-like CDG55_13680 IPR006519 Ribosomal protein L11, bacterial-type CDG55_13680 IPR020784 Ribosomal protein L11, N-terminal CDG55_13680 IPR020785 Ribosomal protein L11, conserved site CDG55_13680 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CDG55_13680 IPR020783 Ribosomal protein L11, C-terminal CDG55_13680 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CDG55_13680 IPR000911 Ribosomal protein L11/L12 CDG55_13685 IPR014722 Ribosomal protein L2, domain 2 CDG55_13685 IPR001062 Transcription antitermination protein, NusG CDG55_13685 IPR008991 Translation protein SH3-like domain superfamily CDG55_13685 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CDG55_13685 IPR036735 NusG, N-terminal domain superfamily CDG55_13685 IPR006645 NusG, N-terminal CDG55_13685 IPR005824 KOW CDG55_13690 IPR005807 SecE subunit of protein translocation complex, bacterial-like CDG55_13690 IPR038379 SecE superfamily CDG55_13690 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit CDG55_13700 IPR009000 Translation protein, beta-barrel domain superfamily CDG55_13700 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CDG55_13700 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CDG55_13700 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDG55_13700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_13700 IPR031157 Tr-type G domain, conserved site CDG55_13700 IPR033720 Elongation factor Tu, domain 2 CDG55_13700 IPR004161 Translation elongation factor EFTu-like, domain 2 CDG55_13700 IPR005225 Small GTP-binding protein domain CDG55_13700 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CDG55_13700 IPR000795 Transcription factor, GTP-binding domain CDG55_13725 IPR019999 Anthranilate synthase component I-like CDG55_13725 IPR006805 Anthranilate synthase component I, N-terminal CDG55_13725 IPR005256 Anthranilate synthase component I, PabB-like CDG55_13725 IPR015890 Chorismate-utilising enzyme, C-terminal CDG55_13725 IPR005801 ADC synthase CDG55_13730 IPR006439 HAD hydrolase, subfamily IA CDG55_13730 IPR036412 HAD-like superfamily CDG55_13730 IPR041492 Haloacid dehalogenase-like hydrolase CDG55_13730 IPR023214 HAD superfamily CDG55_13730 IPR037512 Phosphoglycolate phosphatase, prokaryotic CDG55_13730 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CDG55_13730 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG55_13740 IPR001775 GspD/PilQ family CDG55_13740 IPR004846 Type II/III secretion system CDG55_13740 IPR038591 NolW-like superfamily CDG55_13740 IPR005644 NolW-like CDG55_13740 IPR004845 Type II secretion system GspD, conserved site CDG55_13740 IPR013356 Type II secretion system GspD CDG55_13755 IPR027444 Histone-like protein H-NS, C-terminal domain CDG55_13755 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily CDG55_13755 IPR001801 Histone-like protein H-NS CDG55_13780 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CDG55_13780 IPR022417 Porphobilinogen deaminase, N-terminal CDG55_13780 IPR022418 Porphobilinogen deaminase, C-terminal CDG55_13780 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily CDG55_13780 IPR000860 Porphobilinogen deaminase CDG55_13785 IPR001789 Signal transduction response regulator, receiver domain CDG55_13785 IPR007492 LytTR DNA-binding domain CDG55_13785 IPR011006 CheY-like superfamily CDG55_13790 IPR029016 GAF-like domain superfamily CDG55_13790 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_13790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_13790 IPR010559 Signal transduction histidine kinase, internal region CDG55_13790 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CDG55_13795 IPR029419 Argininosuccinate lyase, C-terminal CDG55_13795 IPR008948 L-Aspartase-like CDG55_13795 IPR022761 Fumarate lyase, N-terminal CDG55_13795 IPR020557 Fumarate lyase, conserved site CDG55_13795 IPR000362 Fumarate lyase family CDG55_13795 IPR024083 Fumarase/histidase, N-terminal CDG55_13795 IPR009049 Argininosuccinate lyase CDG55_13800 IPR007457 Fe(II) trafficking protein YggX CDG55_13800 IPR036766 Fe(II) trafficking protein YggX superfamily CDG55_13805 IPR028366 Phosphate transport system protein PhoU CDG55_13805 IPR038078 PhoU-like domain superfamily CDG55_13805 IPR026022 PhoU domain CDG55_13810 IPR025747 ThiC-associated domain CDG55_13810 IPR037509 Phosphomethylpyrimidine synthase CDG55_13810 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B CDG55_13810 IPR038521 ThiC/Bza superfamily CDG55_13815 IPR004385 Nucleoside diphosphate pyrophosphatase CDG55_13815 IPR015797 NUDIX hydrolase-like domain superfamily CDG55_13815 IPR000086 NUDIX hydrolase domain CDG55_13820 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CDG55_13820 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA CDG55_13820 IPR029052 Metallo-dependent phosphatase-like CDG55_13825 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CDG55_13825 IPR037187 DksA, N-terminal domain superfamily CDG55_13825 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CDG55_13825 IPR000962 Zinc finger, DksA/TraR C4-type CDG55_13825 IPR012784 RNA polymerase-binding transcription factor DksA CDG55_13830 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CDG55_13830 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CDG55_13830 IPR022380 Glutamyl-Q tRNA(Asp) synthetase CDG55_13830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_13835 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CDG55_13835 IPR013437 Probable peptidoglycan glycosyltransferase FtsW CDG55_13835 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CDG55_13840 IPR036565 Mur-like, catalytic domain superfamily CDG55_13840 IPR004101 Mur ligase, C-terminal CDG55_13840 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CDG55_13840 IPR036615 Mur ligase, C-terminal domain superfamily CDG55_13840 IPR013221 Mur ligase, central CDG55_13855 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CDG55_13855 IPR011640 Ferrous iron transport protein B, C-terminal CDG55_13855 IPR030389 FeoB-type guanine nucleotide-binding (G) domain CDG55_13855 IPR006073 GTP binding domain CDG55_13855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_13855 IPR003373 Ferrous iron transport protein B CDG55_13865 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDG55_13865 IPR002104 Integrase, catalytic domain CDG55_13865 IPR023009 Tyrosine recombinase XerC/XerD CDG55_13865 IPR011932 Tyrosine recombinase XerD CDG55_13865 IPR013762 Integrase-like, catalytic domain superfamily CDG55_13865 IPR010998 Integrase/recombinase, N-terminal CDG55_13865 IPR004107 Integrase, SAM-like, N-terminal CDG55_13870 IPR036249 Thioredoxin-like superfamily CDG55_13870 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CDG55_13870 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily CDG55_13870 IPR033954 Disulphide bond isomerase, DsbC/G CDG55_13870 IPR012336 Thioredoxin-like fold CDG55_13870 IPR013766 Thioredoxin domain CDG55_13870 IPR017937 Thioredoxin, conserved site CDG55_13875 IPR019811 Homoserine dehydrogenase, conserved site CDG55_13875 IPR002912 ACT domain CDG55_13875 IPR016204 Homoserine dehydrogenase CDG55_13875 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CDG55_13875 IPR001342 Homoserine dehydrogenase, catalytic CDG55_13875 IPR036291 NAD(P)-binding domain superfamily CDG55_13880 IPR001926 Pyridoxal-phosphate dependent enzyme CDG55_13880 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG55_13880 IPR026260 Threonine synthase, bacterial/archaeal CDG55_13880 IPR004450 Threonine synthase-like CDG55_13880 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CDG55_13890 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CDG55_13890 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CDG55_13890 IPR012338 Beta-lactamase/transpeptidase-like CDG55_13895 IPR000792 Transcription regulator LuxR, C-terminal CDG55_13895 IPR016032 Signal transduction response regulator, C-terminal effector CDG55_13895 IPR001789 Signal transduction response regulator, receiver domain CDG55_13895 IPR011006 CheY-like superfamily CDG55_13900 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDG55_13900 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDG55_13900 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDG55_13900 IPR005467 Histidine kinase domain CDG55_13900 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_13900 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_13900 IPR000014 PAS domain CDG55_13905 IPR009057 Homeobox-like domain superfamily CDG55_13905 IPR002197 DNA binding HTH domain, Fis-type CDG55_13905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_13905 IPR001789 Signal transduction response regulator, receiver domain CDG55_13905 IPR011006 CheY-like superfamily CDG55_13905 IPR002078 RNA polymerase sigma factor 54 interaction domain CDG55_13905 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDG55_13905 IPR003593 AAA+ ATPase domain CDG55_13905 IPR025944 Sigma-54 interaction domain, conserved site CDG55_13905 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDG55_13910 IPR029045 ClpP/crotonase-like domain superfamily CDG55_13910 IPR001478 PDZ domain CDG55_13910 IPR036034 PDZ superfamily CDG55_13910 IPR004447 C-terminal-processing peptidase S41A CDG55_13910 IPR005151 Tail specific protease CDG55_13915 IPR017850 Alkaline-phosphatase-like, core domain superfamily CDG55_13915 IPR006124 Metalloenzyme CDG55_13915 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily CDG55_13915 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent CDG55_13915 IPR011258 BPG-independent PGAM, N-terminal CDG55_13920 IPR005495 Permease LptG/LptF-related CDG55_13920 IPR030923 LPS export ABC transporter permease LptG CDG55_13925 IPR030922 LPS export ABC transporter permease LptF CDG55_13925 IPR005495 Permease LptG/LptF-related CDG55_13930 IPR023042 Peptidase M17, leucine aminopeptidase CDG55_13930 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CDG55_13930 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CDG55_13930 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CDG55_13945 IPR001783 Lumazine-binding protein CDG55_13945 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CDG55_13945 IPR017938 Riboflavin synthase-like beta-barrel CDG55_13945 IPR026017 Lumazine-binding domain CDG55_13960 IPR011549 Riboflavin-specific deaminase, C-terminal CDG55_13960 IPR016193 Cytidine deaminase-like CDG55_13960 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CDG55_13960 IPR004794 Riboflavin biosynthesis protein RibD CDG55_13960 IPR024072 Dihydrofolate reductase-like domain superfamily CDG55_13960 IPR002125 Cytidine and deoxycytidylate deaminase domain CDG55_13960 IPR016192 APOBEC/CMP deaminase, zinc-binding CDG55_13965 IPR003796 Ribonucleotide reductase regulator NrdR-like CDG55_13965 IPR005144 ATP-cone domain CDG55_13970 IPR024041 Ammonium transporter AmtB-like domain CDG55_13970 IPR018047 Ammonium transporter, conserved site CDG55_13970 IPR001905 Ammonium transporter CDG55_13970 IPR029020 Ammonium/urea transporter CDG55_13975 IPR002332 Nitrogen regulatory protein P-II, urydylation site CDG55_13975 IPR017918 Nitrogen regulatory protein PII, conserved site CDG55_13975 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDG55_13975 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDG55_13975 IPR002187 Nitrogen regulatory protein PII CDG55_13985 IPR003593 AAA+ ATPase domain CDG55_13985 IPR004482 Mg chelatase-related protein CDG55_13985 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDG55_13985 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_13985 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_13985 IPR000523 Magnesium chelatase ChlI domain CDG55_13985 IPR025158 Mg chelatase-related protein, C-terminal domain CDG55_14000 IPR023614 Porin domain superfamily CDG55_14000 IPR005318 Outer membrane porin, bacterial CDG55_14005 IPR008162 Inorganic pyrophosphatase CDG55_14005 IPR036649 Inorganic pyrophosphatase superfamily CDG55_14020 IPR025110 AMP-binding enzyme, C-terminal domain CDG55_14020 IPR000873 AMP-dependent synthetase/ligase CDG55_14020 IPR042099 AMP-dependent synthetase-like superfamily CDG55_14020 IPR020845 AMP-binding, conserved site CDG55_14025 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CDG55_14025 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CDG55_14025 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CDG55_14025 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative CDG55_14025 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CDG55_14025 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CDG55_14025 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDG55_14030 IPR005115 Uncharacterised domain UPF0126 CDG55_14035 IPR023006 Uncharacterised protein family UPF0225 CDG55_14035 IPR032710 NTF2-like domain superfamily CDG55_14035 IPR004027 SEC-C motif CDG55_14040 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG55_14040 IPR036318 FAD-binding, type PCMH-like superfamily CDG55_14040 IPR000644 CBS domain CDG55_14040 IPR005496 Integral membrane protein TerC CDG55_14040 IPR005170 Transporter-associated domain CDG55_14045 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CDG55_14045 IPR031100 LOG family CDG55_14055 IPR004638 Drug resistance transporter EmrB-like CDG55_14055 IPR011701 Major facilitator superfamily CDG55_14055 IPR036259 MFS transporter superfamily CDG55_14055 IPR023721 Multidrug resistance protein MdtD CDG55_14055 IPR020846 Major facilitator superfamily domain CDG55_14065 IPR022880 DNA polymerase IV CDG55_14065 IPR024728 DNA polymerase type-Y, HhH motif CDG55_14065 IPR017961 DNA polymerase, Y-family, little finger domain CDG55_14065 IPR001126 UmuC domain CDG55_14065 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CDG55_14070 IPR001789 Signal transduction response regulator, receiver domain CDG55_14070 IPR039420 Transcriptional regulatory protein WalR-like CDG55_14070 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_14070 IPR011006 CheY-like superfamily CDG55_14070 IPR001867 OmpR/PhoB-type DNA-binding domain CDG55_14070 IPR016032 Signal transduction response regulator, C-terminal effector CDG55_14080 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDG55_14080 IPR005467 Histidine kinase domain CDG55_14080 IPR029151 Periplasmic sensor-like domain superfamily CDG55_14080 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDG55_14080 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_14080 IPR003660 HAMP domain CDG55_14080 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_14080 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDG55_14085 IPR010364 Uncharacterised protein family, inner membrane CreD CDG55_14105 IPR020612 Methylthiotransferase, conserved site CDG55_14105 IPR023404 Radical SAM, alpha/beta horseshoe CDG55_14105 IPR006638 Elp3/MiaB/NifB CDG55_14105 IPR013704 Uncharacterised protein family UPF0313, N-terminal CDG55_14105 IPR007197 Radical SAM CDG55_14105 IPR022946 Uncharacterised protein family UPF0313 CDG55_14105 IPR024560 Uncharacterised protein family UPF0313, C-terminal CDG55_14115 IPR036259 MFS transporter superfamily CDG55_14115 IPR020846 Major facilitator superfamily domain CDG55_14115 IPR011701 Major facilitator superfamily CDG55_14115 IPR005829 Sugar transporter, conserved site CDG55_14125 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CDG55_14125 IPR001926 Pyridoxal-phosphate dependent enzyme CDG55_14125 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG55_14125 IPR005859 Cysteine synthase CysK CDG55_14125 IPR005856 Cysteine synthase CDG55_14160 IPR000060 BCCT transporter family CDG55_14160 IPR018093 BCCT transporter, conserved site CDG55_14180 IPR014083 Cation/acetate symporter ActP CDG55_14180 IPR038377 Sodium/glucose symporter superfamily CDG55_14180 IPR001734 Sodium/solute symporter CDG55_14180 IPR018212 Sodium/solute symporter, conserved site CDG55_14185 IPR007436 Protein of unknown function DUF485 CDG55_14190 IPR003594 Histidine kinase/HSP90-like ATPase CDG55_14190 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal CDG55_14190 IPR001789 Signal transduction response regulator, receiver domain CDG55_14190 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDG55_14190 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CDG55_14190 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CDG55_14190 IPR005467 Histidine kinase domain CDG55_14190 IPR030856 Sensor histidine kinase RcsC CDG55_14190 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG55_14190 IPR011006 CheY-like superfamily CDG55_14190 IPR038388 RcsC, C-terminal domain superfamily CDG55_14210 IPR036821 Peptide deformylase superfamily CDG55_14210 IPR023635 Peptide deformylase CDG55_14215 IPR018392 LysM domain CDG55_14215 IPR036779 LysM domain superfamily CDG55_14220 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_14220 IPR003488 DNA recombination-mediator protein A CDG55_14220 IPR041614 DprA, winged helix domain CDG55_14225 IPR023535 Threonylcarbamoyl-AMP synthase CDG55_14225 IPR006070 YrdC-like domain CDG55_14225 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDG55_14245 IPR000889 Glutathione peroxidase CDG55_14245 IPR033674 Thioredoxin/glutathione peroxidase BtuE CDG55_14245 IPR029759 Glutathione peroxidase active site CDG55_14245 IPR029760 Glutathione peroxidase conserved site CDG55_14245 IPR036249 Thioredoxin-like superfamily CDG55_14255 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CDG55_14255 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily CDG55_14255 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal CDG55_14255 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal CDG55_14260 IPR005722 ATP synthase, F1 complex, beta subunit CDG55_14260 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CDG55_14260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_14260 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal CDG55_14260 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CDG55_14260 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CDG55_14260 IPR003593 AAA+ ATPase domain CDG55_14260 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CDG55_14265 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site CDG55_14265 IPR000131 ATP synthase, F1 complex, gamma subunit CDG55_14265 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily CDG55_14270 IPR005294 ATP synthase, F1 complex, alpha subunit CDG55_14270 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CDG55_14270 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CDG55_14270 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CDG55_14270 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain CDG55_14270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_14270 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CDG55_14270 IPR000793 ATP synthase, alpha subunit, C-terminal CDG55_14270 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily CDG55_14270 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CDG55_14275 IPR000711 ATPase, OSCP/delta subunit CDG55_14275 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily CDG55_14275 IPR020781 ATPase, OSCP/delta subunit, conserved site CDG55_14280 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CDG55_14280 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast CDG55_14280 IPR005864 ATP synthase, F0 complex, subunit b, bacterial CDG55_14285 IPR035921 F/V-ATP synthase subunit C superfamily CDG55_14285 IPR002379 V-ATPase proteolipid subunit C-like domain CDG55_14285 IPR038662 F1F0 ATP synthase subunit C superfamily CDG55_14285 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site CDG55_14285 IPR000454 ATP synthase, F0 complex, subunit C CDG55_14285 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast CDG55_14290 IPR035908 ATP synthase, F0 complex, subunit A superfamily CDG55_14290 IPR000568 ATP synthase, F0 complex, subunit A CDG55_14290 IPR023011 ATP synthase, F0 complex, subunit A, active site CDG55_14310 IPR017882 Zinc import ATP-binding protein ZnuC CDG55_14310 IPR003593 AAA+ ATPase domain CDG55_14310 IPR017871 ABC transporter, conserved site CDG55_14310 IPR003439 ABC transporter-like CDG55_14310 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_14315 IPR037294 ABC transporter, BtuC-like CDG55_14315 IPR001626 ABC transporter, TroCD-like CDG55_14320 IPR011008 Dimeric alpha-beta barrel CDG55_14320 IPR006314 Dyp-type peroxidase CDG55_14330 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily CDG55_14330 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CDG55_14330 IPR005148 Arginyl tRNA synthetase N-terminal domain CDG55_14330 IPR001278 Arginine-tRNA ligase CDG55_14330 IPR035684 Arginyl-tRNA synthetase, catalytic core domain CDG55_14330 IPR008909 DALR anticodon binding CDG55_14350 IPR011051 RmlC-like cupin domain superfamily CDG55_14350 IPR012093 Pirin CDG55_14350 IPR008778 Pirin, C-terminal domain CDG55_14350 IPR003829 Pirin, N-terminal domain CDG55_14350 IPR014710 RmlC-like jelly roll fold CDG55_14370 IPR025777 GMP synthetase ATP pyrophosphatase domain CDG55_14370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_14370 IPR022310 NAD/GMP synthase CDG55_14370 IPR017926 Glutamine amidotransferase CDG55_14370 IPR029062 Class I glutamine amidotransferase-like CDG55_14370 IPR004739 GMP synthase, glutamine amidotransferase CDG55_14370 IPR022955 GMP synthase CDG55_14370 IPR001674 GMP synthase, C-terminal CDG55_14385 IPR007383 Protein of unknown function DUF445 CDG55_14385 IPR016991 Protein of unknown function UCP032178 CDG55_14395 IPR032808 DoxX family CDG55_14400 IPR032818 DedA family CDG55_14400 IPR032816 SNARE associated Golgi protein CDG55_14415 IPR025669 AAA domain CDG55_14415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_14425 IPR002634 BolA protein CDG55_14425 IPR036065 BolA-like superfamily CDG55_14460 IPR010781 Protein of unknown function DUF1376 CDG55_14475 IPR013399 CRISPR-associated protein Csy3 CDG55_14480 IPR013398 CRISPR-associated protein Csy2 CDG55_14485 IPR013397 CRISPR-associated protein Csy1 CDG55_14490 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type CDG55_14490 IPR038257 CRISPR-associated Cas3-type HD domain superfamily CDG55_14490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_14490 IPR006483 CRISPR-associated Cas3-type HD domain CDG55_14495 IPR002729 CRISPR-associated protein Cas1 CDG55_14495 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain CDG55_14495 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain CDG55_14495 IPR019857 CRISPR-associated protein Cas1, YPEST subtype CDG55_14520 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG55_14520 IPR001650 Helicase, C-terminal CDG55_14520 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_14520 IPR038718 SNF2-like, N-terminal domain superfamily CDG55_14520 IPR000330 SNF2-related, N-terminal domain CDG55_14520 IPR022138 Helicase SWF/SNF-related CDG55_14530 IPR009614 Toxin YoeB CDG55_14530 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CDG55_14575 IPR013321 Arc-type ribbon-helix-helix CDG55_14575 IPR007337 RelB antitoxin/Antitoxin DinJ CDG55_14580 IPR000644 CBS domain CDG55_14580 IPR036318 FAD-binding, type PCMH-like superfamily CDG55_14580 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG55_14580 IPR005496 Integral membrane protein TerC CDG55_14580 IPR005170 Transporter-associated domain CDG55_14615 IPR004841 Amino acid permease/ SLC12A domain CDG55_14615 IPR004840 Amino acid permease, conserved site CDG55_14620 IPR006175 YjgF/YER057c/UK114 family CDG55_14620 IPR019897 RidA, conserved site CDG55_14620 IPR035709 RutC family, YoaB-like CDG55_14620 IPR035959 RutC-like superfamily CDG55_14625 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CDG55_14625 IPR011079 Alanine racemase, C-terminal CDG55_14625 IPR001608 Alanine racemase, N-terminal CDG55_14625 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CDG55_14625 IPR029066 PLP-binding barrel CDG55_14625 IPR000821 Alanine racemase CDG55_14630 IPR006076 FAD dependent oxidoreductase CDG55_14630 IPR036188 FAD/NAD(P)-binding domain superfamily CDG55_14630 IPR023080 D-amino acid dehydrogenase DadA CDG55_14635 IPR000485 AsnC-type HTH domain CDG55_14635 IPR011008 Dimeric alpha-beta barrel CDG55_14635 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_14635 IPR036390 Winged helix DNA-binding domain superfamily CDG55_14635 IPR011991 ArsR-like helix-turn-helix domain CDG55_14635 IPR019888 Transcription regulator AsnC-type CDG55_14635 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDG55_14635 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG55_14645 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CDG55_14645 IPR006145 Pseudouridine synthase, RsuA/RluA CDG55_14645 IPR020103 Pseudouridine synthase, catalytic domain superfamily CDG55_14645 IPR006225 Pseudouridine synthase, RluC/RluD CDG55_14675 IPR042174 DNA-binding RecF, domain 2 CDG55_14675 IPR001238 DNA-binding, RecF CDG55_14675 IPR018078 DNA-binding, RecF, conserved site CDG55_14675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_14675 IPR003395 RecF/RecN/SMC, N-terminal CDG55_14680 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent CDG55_14680 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CDG55_14680 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CDG55_14680 IPR006249 Aconitase/Iron-responsive element-binding protein 2 CDG55_14680 IPR036008 Aconitase, iron-sulfur domain CDG55_14680 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CDG55_14680 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDG55_14685 IPR024176 Citrate synthase, bacterial-type CDG55_14685 IPR019810 Citrate synthase active site CDG55_14685 IPR002020 Citrate synthase CDG55_14685 IPR036969 Citrate synthase superfamily CDG55_14685 IPR016142 Citrate synthase-like, large alpha subdomain CDG55_14685 IPR011278 2-methylcitrate synthase/citrate synthase type I CDG55_14685 IPR016143 Citrate synthase-like, small alpha subdomain CDG55_14690 IPR039556 ICL/PEPM domain CDG55_14690 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CDG55_14690 IPR012695 2-methylisocitrate lyase CDG55_14690 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CDG55_14690 IPR040442 Pyruvate kinase-like domain superfamily CDG55_14695 IPR036390 Winged helix DNA-binding domain superfamily CDG55_14695 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_14695 IPR000524 Transcription regulator HTH, GntR CDG55_14695 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG55_14695 IPR011711 GntR, C-terminal CDG55_14695 IPR000485 AsnC-type HTH domain CDG55_14700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CDG55_14700 IPR015424 Pyridoxal phosphate-dependent transferase CDG55_14700 IPR004839 Aminotransferase, class I/classII CDG55_14700 IPR000796 Aspartate/other aminotransferase CDG55_14700 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CDG55_14700 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CDG55_14705 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CDG55_14705 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CDG55_14705 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CDG55_14705 IPR005843 Alpha-D-phosphohexomutase, C-terminal CDG55_14705 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CDG55_14705 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CDG55_14705 IPR005841 Alpha-D-phosphohexomutase superfamily CDG55_14705 IPR016066 Alpha-D-phosphohexomutase, conserved site CDG55_14710 IPR005886 UDP-glucose 4-epimerase CDG55_14710 IPR036291 NAD(P)-binding domain superfamily CDG55_14710 IPR016040 NAD(P)-binding domain CDG55_14715 IPR001672 Phosphoglucose isomerase (PGI) CDG55_14715 IPR035482 Phosphoglucose isomerase, SIS domain 2 CDG55_14715 IPR023096 Phosphoglucose isomerase, C-terminal CDG55_14715 IPR035476 Phosphoglucose isomerase, SIS domain 1 CDG55_14715 IPR018189 Phosphoglucose isomerase, conserved site CDG55_14720 IPR036291 NAD(P)-binding domain superfamily CDG55_14720 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CDG55_14720 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CDG55_14720 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CDG55_14720 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDG55_14720 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CDG55_14720 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CDG55_14720 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CDG55_14725 IPR005835 Nucleotidyl transferase domain CDG55_14725 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CDG55_14725 IPR029044 Nucleotide-diphospho-sugar transferases CDG55_14730 IPR036291 NAD(P)-binding domain superfamily CDG55_14730 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CDG55_14730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_14740 IPR000715 Glycosyl transferase, family 4 CDG55_14745 IPR001509 NAD-dependent epimerase/dehydratase CDG55_14745 IPR036291 NAD(P)-binding domain superfamily CDG55_14750 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CDG55_14755 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CDG55_14755 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like CDG55_14760 IPR011051 RmlC-like cupin domain superfamily CDG55_14760 IPR014710 RmlC-like jelly roll fold CDG55_14760 IPR036291 NAD(P)-binding domain superfamily CDG55_14760 IPR001509 NAD-dependent epimerase/dehydratase CDG55_14765 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CDG55_14765 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain CDG55_14765 IPR036291 NAD(P)-binding domain superfamily CDG55_14775 IPR029044 Nucleotide-diphospho-sugar transferases CDG55_14775 IPR001173 Glycosyltransferase 2-like CDG55_14775 IPR024009 Colanic acid biosynthesis, glycosyl transferase, WcaA CDG55_14785 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CDG55_14785 IPR036291 NAD(P)-binding domain superfamily CDG55_14785 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CDG55_14785 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CDG55_14785 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CDG55_14785 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CDG55_14785 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDG55_14785 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CDG55_14795 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CDG55_14795 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CDG55_14795 IPR036291 NAD(P)-binding domain superfamily CDG55_14795 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CDG55_14795 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CDG55_14795 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CDG55_14795 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CDG55_14795 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CDG55_14805 IPR003715 Polysaccharide export protein CDG55_14805 IPR019554 Soluble ligand binding domain CDG55_14805 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain CDG55_14810 IPR036196 Phosphotyrosine protein phosphatase I superfamily CDG55_14810 IPR023485 Phosphotyrosine protein phosphatase I CDG55_14810 IPR017867 Protein-tyrosine phosphatase, low molecular weight CDG55_14815 IPR025669 AAA domain CDG55_14815 IPR005702 Exopolysaccharide synthesis protein CDG55_14815 IPR032807 Tyrosine kinase, G-rich domain CDG55_14815 IPR003856 Polysaccharide chain length determinant N-terminal domain CDG55_14815 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_14820 IPR008104 Macrophage infectivity potentiator CDG55_14820 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG55_14820 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CDG55_14820 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily CDG55_14825 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily CDG55_14825 IPR008104 Macrophage infectivity potentiator CDG55_14825 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG55_14825 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CDG55_14830 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG55_14835 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CDG55_14835 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CDG55_14840 IPR013785 Aldolase-type TIM barrel CDG55_14840 IPR004393 Nicotinate-nucleotide pyrophosphorylase CDG55_14840 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CDG55_14840 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CDG55_14840 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily CDG55_14840 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CDG55_14840 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CDG55_14845 IPR002381 Ribonuclease PH, bacterial-type CDG55_14845 IPR018336 Ribonuclease PH, conserved site CDG55_14845 IPR001247 Exoribonuclease, phosphorolytic domain 1 CDG55_14845 IPR015847 Exoribonuclease, phosphorolytic domain 2 CDG55_14845 IPR036345 Exoribonuclease, PH domain 2 superfamily CDG55_14845 IPR027408 PNPase/RNase PH domain superfamily CDG55_14845 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_14850 IPR005804 Fatty acid desaturase domain CDG55_14855 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG55_14855 IPR017938 Riboflavin synthase-like beta-barrel CDG55_14855 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDG55_14860 IPR023764 Transcriptional repressor HTH, FabR CDG55_14860 IPR001647 DNA-binding HTH domain, TetR-type CDG55_14860 IPR009057 Homeobox-like domain superfamily CDG55_14865 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG55_14865 IPR013571 Transcription regulator QacR, C-terminal CDG55_14865 IPR001647 DNA-binding HTH domain, TetR-type CDG55_14865 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDG55_14865 IPR009057 Homeobox-like domain superfamily CDG55_14870 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CDG55_14870 IPR001853 DSBA-like thioredoxin domain CDG55_14870 IPR017937 Thioredoxin, conserved site CDG55_14870 IPR013766 Thioredoxin domain CDG55_14870 IPR036249 Thioredoxin-like superfamily CDG55_14875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG55_14875 IPR010233 Ubiquinone biosynthesis O-methyltransferase CDG55_14880 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CDG55_14880 IPR036412 HAD-like superfamily CDG55_14880 IPR023214 HAD superfamily CDG55_14880 IPR041492 Haloacid dehalogenase-like hydrolase CDG55_14880 IPR006439 HAD hydrolase, subfamily IA CDG55_14880 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG55_14885 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDG55_14885 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_14885 IPR036291 NAD(P)-binding domain superfamily CDG55_14895 IPR036393 Acetylglutamate kinase-like superfamily CDG55_14895 IPR001048 Aspartate/glutamate/uridylate kinase CDG55_14895 IPR000182 GNAT domain CDG55_14895 IPR033719 N-acetylglutamate synthase, kinase-like domain CDG55_14895 IPR016181 Acyl-CoA N-acyltransferase CDG55_14895 IPR010167 Amino-acid N-acetyltransferase CDG55_14900 IPR015168 SsuA/THI5-like CDG55_14900 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG55_14900 IPR010067 Aliphatic sulfonates-binding protein CDG55_14905 IPR011251 Luciferase-like domain CDG55_14905 IPR036661 Luciferase-like domain superfamily CDG55_14905 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent CDG55_14910 IPR035906 MetI-like superfamily CDG55_14910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CDG55_14915 IPR003593 AAA+ ATPase domain CDG55_14915 IPR003439 ABC transporter-like CDG55_14915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_14915 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB CDG55_14920 IPR041474 HTH-type transcriptional repressor NicS, C-terminal CDG55_14920 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG55_14920 IPR009057 Homeobox-like domain superfamily CDG55_14920 IPR001647 DNA-binding HTH domain, TetR-type CDG55_14925 IPR000160 GGDEF domain CDG55_14925 IPR029787 Nucleotide cyclase CDG55_14925 IPR007894 MASE2 CDG55_14930 IPR035994 Nucleoside phosphorylase superfamily CDG55_14930 IPR000845 Nucleoside phosphorylase domain CDG55_14930 IPR010049 MTA/SAH nucleosidase CDG55_14935 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CDG55_14935 IPR015864 FAD synthetase CDG55_14935 IPR002606 Riboflavin kinase, bacterial CDG55_14935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_14935 IPR023465 Riboflavin kinase domain superfamily CDG55_14935 IPR023468 Riboflavin kinase CDG55_14940 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CDG55_14940 IPR023585 Isoleucine-tRNA ligase, type 1 CDG55_14940 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDG55_14940 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CDG55_14940 IPR002300 Aminoacyl-tRNA synthetase, class Ia CDG55_14940 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain CDG55_14940 IPR002301 Isoleucine-tRNA ligase CDG55_14940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG55_14940 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CDG55_14940 IPR010663 Zinc finger, FPG/IleRS-type CDG55_14945 IPR001872 Peptidase A8, signal peptidase II CDG55_14950 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG55_14955 IPR029039 Flavoprotein-like superfamily CDG55_14955 IPR005025 NADPH-dependent FMN reductase-like CDG55_14995 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CDG55_14995 IPR029000 Cyclophilin-like domain superfamily CDG55_14995 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CDG55_15000 IPR002168 Lipase, GDXG, putative histidine active site CDG55_15000 IPR013094 Alpha/beta hydrolase fold-3 CDG55_15000 IPR029058 Alpha/Beta hydrolase fold CDG55_15000 IPR033140 Lipase, GDXG, putative serine active site CDG55_15015 IPR013805 GrpE nucleotide exchange factor, coiled-coil CDG55_15015 IPR000740 GrpE nucleotide exchange factor CDG55_15015 IPR009012 GrpE nucleotide exchange factor, head CDG55_15020 IPR013126 Heat shock protein 70 family CDG55_15020 IPR018181 Heat shock protein 70, conserved site CDG55_15020 IPR012725 Chaperone DnaK CDG55_15020 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CDG55_15020 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CDG55_15025 IPR001279 Metallo-beta-lactamase CDG55_15025 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG55_15025 IPR022877 Protein of unknown funcion UPF0173 CDG55_15045 IPR023346 Lysozyme-like domain superfamily CDG55_15045 IPR031304 Transglycosylase SLT domain 2 CDG55_15045 IPR011757 Lytic transglycosylase MltB CDG55_15050 IPR011054 Rudiment single hybrid motif CDG55_15050 IPR011761 ATP-grasp fold CDG55_15050 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CDG55_15050 IPR013815 ATP-grasp fold, subdomain 1 CDG55_15050 IPR016185 Pre-ATP-grasp domain superfamily CDG55_15050 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain CDG55_15050 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit CDG55_15055 IPR033747 Class I PurE CDG55_15055 IPR000031 PurE domain CDG55_15055 IPR024694 PurE, prokaryotic type CDG55_15055 IPR035893 PurE domain superfamily CDG55_15065 IPR036565 Mur-like, catalytic domain superfamily CDG55_15065 IPR000713 Mur ligase, N-terminal catalytic domain CDG55_15065 IPR013221 Mur ligase, central CDG55_15065 IPR004101 Mur ligase, C-terminal CDG55_15065 IPR005757 Murein peptide ligase CDG55_15065 IPR036615 Mur ligase, C-terminal domain superfamily CDG55_15075 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDG55_15075 IPR002347 Short-chain dehydrogenase/reductase SDR CDG55_15075 IPR036291 NAD(P)-binding domain superfamily CDG55_15090 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CDG55_15090 IPR006089 Acyl-CoA dehydrogenase, conserved site CDG55_15090 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDG55_15090 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CDG55_15090 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDG55_15090 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDG55_15090 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CDG55_15095 IPR036388 Winged helix-like DNA-binding domain superfamily CDG55_15095 IPR036390 Winged helix DNA-binding domain superfamily CDG55_15095 IPR005119 LysR, substrate-binding CDG55_15095 IPR000847 Transcription regulator HTH, LysR CDG55_15100 IPR005496 Integral membrane protein TerC CDG55_15100 IPR022369 Integral membrane protein TerC, riboswitch-linked CDG55_15110 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CDG55_15110 IPR016185 Pre-ATP-grasp domain superfamily CDG55_15120 IPR032466 Metal-dependent hydrolase CDG55_15120 IPR011059 Metal-dependent hydrolase, composite domain superfamily CDG55_15120 IPR014311 Guanine deaminase CDG55_15120 IPR006680 Amidohydrolase-related CDG55_15125 IPR005904 Hypoxanthine phosphoribosyl transferase CDG55_15125 IPR000836 Phosphoribosyltransferase domain CDG55_15125 IPR029057 Phosphoribosyltransferase-like CDG55_15135 IPR033954 Disulphide bond isomerase, DsbC/G CDG55_15135 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CDG55_15135 IPR012336 Thioredoxin-like fold CDG55_15135 IPR036249 Thioredoxin-like superfamily CDG55_15135 IPR017937 Thioredoxin, conserved site CDG55_15140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_15140 IPR001482 Type II/IV secretion system protein CDG55_15140 IPR003593 AAA+ ATPase domain CDG55_15140 IPR006321 Pilus retraction protein PilT CDG55_15150 IPR006073 GTP binding domain CDG55_15150 IPR031168 TrmE-type guanine nucleotide-binding domain CDG55_15150 IPR004520 tRNA modification GTPase MnmE CDG55_15150 IPR018948 GTP-binding protein TrmE, N-terminal CDG55_15150 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDG55_15150 IPR005225 Small GTP-binding protein domain CDG55_15150 IPR027368 tRNA modification GTPase MnmE domain 2 CDG55_15150 IPR025867 MnmE, helical domain CDG55_15150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG55_15155 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CDG55_15155 IPR028053 Membrane insertase YidC, N-terminal CDG55_15155 IPR019998 Membrane insertase YidC CDG55_15155 IPR038221 YidC, periplasmic domain superfamily CDG55_15155 IPR038210 Membrane insertase YidC, periplasmic domain CDG55_15155 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CDG55_15160 IPR002696 Putative membrane protein insertion efficiency factor CDG55_15165 IPR020568 Ribosomal protein S5 domain 2-type fold CDG55_15165 IPR000100 Ribonuclease P CDG55_15165 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG55_15165 IPR020539 Ribonuclease P, conserved site CDG55_15170 IPR000271 Ribosomal protein L34 CDG55_15170 IPR020939 Ribosomal protein L34, conserved site