CDG55_00050 SM00857 Resolvase, N terminal domain CDG55_00175 SM00530 Helix-turn-helix XRE-family like proteins CDG55_00265 SM00530 Helix-turn-helix XRE-family like proteins CDG55_00380 SM00860 SMI1 / KNR4 family CDG55_00420 SM00883 Chaperonin 10 Kd subunit CDG55_00445 SM00849 Metallo-beta-lactamase superfamily CDG55_00575 SM00470 ParB-like nuclease domain CDG55_00605 SM00487 DEAD-like helicases superfamily CDG55_00690 SM00342 helix_turn_helix, arabinose operon control protein CDG55_00810 SM00422 helix_turn_helix, mercury resistance CDG55_00825 SM00530 Helix-turn-helix XRE-family like proteins CDG55_00895 SM00382 ATPases associated with a variety of cellular activities CDG55_00915 SM00857 Resolvase, N terminal domain CDG55_00945 SM00422 helix_turn_helix, mercury resistance CDG55_00955 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDG55_00990 SM00382 ATPases associated with a variety of cellular activities CDG55_00995 SM00530 Helix-turn-helix XRE-family like proteins CDG55_01030 SM00342 helix_turn_helix, arabinose operon control protein CDG55_01065 SM00974 CDG55_01065 CDG55_01115 SM00422 helix_turn_helix, mercury resistance CDG55_01140 SM00422 helix_turn_helix, mercury resistance CDG55_01175 SM00382 ATPases associated with a variety of cellular activities CDG55_01175 SM00760 Bacterial dnaA protein helix-turn-helix domain CDG55_01180 SM00480 DNA polymerase III beta subunit CDG55_01190 SM00387 Histidine kinase-like ATPases CDG55_01190 SM00433 TopoisomeraseII CDG55_01200 SM00382 ATPases associated with a variety of cellular activities CDG55_01285 SM00248 ankyrin repeats CDG55_01360 SM00271 DnaJ molecular chaperone homology domain CDG55_01385 SM00829 Enoylreductase CDG55_01405 SM00478 endonuclease III CDG55_01405 SM00525 CDG55_01405 CDG55_01430 SM00382 ATPases associated with a variety of cellular activities CDG55_01460 SM01130 CDG55_01460 CDG55_01470 SM00344 helix_turn_helix ASNC type CDG55_01545 SM00450 Rhodanese Homology Domain CDG55_01575 SM00387 Histidine kinase-like ATPases CDG55_01575 SM00388 His Kinase A (phosphoacceptor) domain CDG55_01580 SM00448 cheY-homologous receiver domain CDG55_01580 SM00862 Transcriptional regulatory protein, C terminal CDG55_01650 SM00387 Histidine kinase-like ATPases CDG55_01650 SM00433 TopoisomeraseII CDG55_01675 SM00382 ATPases associated with a variety of cellular activities CDG55_01715 SM00267 diguanylate cyclase CDG55_01765 SM00347 helix_turn_helix multiple antibiotic resistance protein CDG55_01800 SM00842 Cell division protein FtsA CDG55_01805 SM00864 Tubulin/FtsZ family, GTPase domain CDG55_01805 SM00865 Tubulin/FtsZ family, C-terminal domain CDG55_01850 SM00849 Metallo-beta-lactamase superfamily CDG55_01860 SM00116 Domain in cystathionine beta-synthase and other proteins. CDG55_01860 SM01240 CDG55_01860 CDG55_01890 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDG55_01935 SM00344 helix_turn_helix ASNC type CDG55_01950 SM00421 helix_turn_helix, Lux Regulon CDG55_01950 SM00448 cheY-homologous receiver domain CDG55_02030 SM00530 Helix-turn-helix XRE-family like proteins CDG55_02105 SM00507 HNH nucleases CDG55_02135 SM00530 Helix-turn-helix XRE-family like proteins CDG55_02195 SM00477 DNA/RNA non-specific endonuclease CDG55_02195 SM00892 DNA/RNA non-specific endonuclease CDG55_02205 SM00342 helix_turn_helix, arabinose operon control protein CDG55_02245 SM00530 Helix-turn-helix XRE-family like proteins CDG55_02295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDG55_02295 SM00387 Histidine kinase-like ATPases CDG55_02295 SM00388 His Kinase A (phosphoacceptor) domain CDG55_02300 SM00448 cheY-homologous receiver domain CDG55_02300 SM00862 Transcriptional regulatory protein, C terminal CDG55_02305 SM00316 Ribosomal protein S1-like RNA-binding domain CDG55_02305 SM00732 Likely ribonuclease with RNase H fold. CDG55_02325 SM00822 CDG55_02325 CDG55_02335 SM00382 ATPases associated with a variety of cellular activities CDG55_02460 SM00842 Cell division protein FtsA CDG55_02480 SM00965 Secretin and TonB N terminus short domain CDG55_02550 SM00382 ATPases associated with a variety of cellular activities CDG55_02670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDG55_02670 SM00954 Region found in RelA / SpoT proteins CDG55_02675 SM01409 CDG55_02675 CDG55_02680 SM00072 Guanylate kinase homologues. CDG55_02930 SM00116 Domain in cystathionine beta-synthase and other proteins. CDG55_02965 SM00729 Elongator protein 3, MiaB family, Radical SAM CDG55_02975 SM00861 Transketolase, pyrimidine binding domain CDG55_02985 SM00487 DEAD-like helicases superfamily CDG55_02985 SM00490 helicase superfamily c-terminal domain CDG55_02995 SM00382 ATPases associated with a variety of cellular activities CDG55_03035 SM00487 DEAD-like helicases superfamily CDG55_03035 SM00490 helicase superfamily c-terminal domain CDG55_03055 SM00563 Phosphate acyltransferases CDG55_03090 SM00382 ATPases associated with a variety of cellular activities CDG55_03105 SM01403 CDG55_03105 CDG55_03125 SM01382 CDG55_03125 CDG55_03125 SM01383 CDG55_03125 CDG55_03140 SM00322 K homology RNA-binding domain CDG55_03160 SM01374 CDG55_03160 CDG55_03165 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CDG55_03230 SM00363 S4 RNA-binding domain CDG55_03230 SM01390 CDG55_03230 CDG55_03235 SM00662 RNA polymerases D CDG55_03310 SM00316 Ribosomal protein S1-like RNA-binding domain CDG55_03310 SM00955 CDG55_03310 CDG55_03400 SM00671 Sel1-like repeats. CDG55_03415 SM00917 LeuA allosteric (dimerisation) domain CDG55_03420 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CDG55_03440 SM00382 ATPases associated with a variety of cellular activities CDG55_03440 SM00994 ClpX C4-type zinc finger CDG55_03440 SM01086 C-terminal, D2-small domain, of ClpB protein CDG55_03490 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDG55_03490 SM00245 tail specific protease CDG55_03520 SM00563 Phosphate acyltransferases CDG55_03525 SM00155 Phospholipase D. Active site motifs. CDG55_03540 SM00267 diguanylate cyclase CDG55_03610 SM00450 Rhodanese Homology Domain CDG55_03635 SM00481 DNA polymerase alpha chain like domain CDG55_03660 SM00342 helix_turn_helix, arabinose operon control protein CDG55_03680 SM00450 Rhodanese Homology Domain CDG55_03690 SM00479 CDG55_03690 CDG55_03715 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CDG55_03715 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CDG55_03765 SM00387 Histidine kinase-like ATPases CDG55_03765 SM00388 His Kinase A (phosphoacceptor) domain CDG55_03765 SM00448 cheY-homologous receiver domain CDG55_03785 SM00954 Region found in RelA / SpoT proteins CDG55_03805 SM00028 Tetratricopeptide repeats CDG55_03820 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CDG55_03865 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CDG55_03920 SM00873 B3/4 domain CDG55_03920 SM00874 tRNA synthetase B5 domain CDG55_03920 SM00896 Ferredoxin-fold anticodon binding domain CDG55_03925 SM00411 bacterial (prokaryotic) histone like domain CDG55_03935 SM00357 Cold shock protein domain CDG55_03935 SM00382 ATPases associated with a variety of cellular activities CDG55_03935 SM00959 Rho termination factor, N-terminal domain CDG55_03955 SM00977 TilS substrate C-terminal domain CDG55_03970 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CDG55_03970 SM00474 3'-5' exonuclease CDG55_03970 SM00475 5'-3' exonuclease CDG55_03970 SM00482 DNA polymerase A domain CDG55_03990 SM00382 ATPases associated with a variety of cellular activities CDG55_04000 SM00347 helix_turn_helix multiple antibiotic resistance protein CDG55_04020 SM00331 Sigma factor PP2C-like phosphatases CDG55_04300 SM00448 cheY-homologous receiver domain CDG55_04300 SM00862 Transcriptional regulatory protein, C terminal CDG55_04305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDG55_04305 SM00387 Histidine kinase-like ATPases CDG55_04305 SM00388 His Kinase A (phosphoacceptor) domain CDG55_04340 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDG55_04345 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDG55_04345 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDG55_04390 SM00357 Cold shock protein domain CDG55_04395 SM00357 Cold shock protein domain CDG55_04470 SM00849 Metallo-beta-lactamase superfamily CDG55_04560 SM00382 ATPases associated with a variety of cellular activities CDG55_04560 SM00962 SRP54-type protein, GTPase domain CDG55_04560 SM00963 SRP54-type protein, helical bundle domain CDG55_04590 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDG55_04600 SM00771 ZipA, C-terminal domain (FtsZ-binding) CDG55_04605 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CDG55_04605 SM00292 breast cancer carboxy-terminal domain CDG55_04605 SM00532 Ligase N family CDG55_04685 SM00382 ATPases associated with a variety of cellular activities CDG55_04690 SM00363 S4 RNA-binding domain CDG55_04730 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CDG55_04735 SM00822 CDG55_04735 CDG55_04750 SM00257 Lysin motif CDG55_04785 SM01400 CDG55_04785 CDG55_04820 SM00028 Tetratricopeptide repeats CDG55_04830 SM00400 zinc finger CDG55_04830 SM00493 CDG55_04830 CDG55_04840 SM00363 S4 RNA-binding domain CDG55_05010 SM00825 Beta-ketoacyl synthase CDG55_05030 SM00838 Elongation factor G C-terminus CDG55_05030 SM00889 Elongation factor G, domain IV CDG55_05070 SM00843 CDG55_05070 CDG55_05105 SM00563 Phosphate acyltransferases CDG55_05170 SM00382 ATPases associated with a variety of cellular activities CDG55_05175 SM00382 ATPases associated with a variety of cellular activities CDG55_05220 SM01004 Delta-aminolevulinic acid dehydratase CDG55_05315 SM01322 CDG55_05315 CDG55_05390 SM00420 helix_turn_helix, Deoxyribose operon repressor CDG55_05390 SM01134 CDG55_05390 CDG55_05415 SM00046 Diacylglycerol kinase catalytic domain (presumed) CDG55_05425 SM00883 Chaperonin 10 Kd subunit CDG55_05455 SM00421 helix_turn_helix, Lux Regulon CDG55_05495 SM00947 Carbonic anhydrase CDG55_05505 SM00382 ATPases associated with a variety of cellular activities CDG55_05580 SM01329 CDG55_05580 CDG55_05605 SM00880 CDG55_05605 CDG55_05605 SM01118 CDG55_05605 CDG55_05625 SM00020 Trypsin-like serine protease CDG55_05650 SM00487 DEAD-like helicases superfamily CDG55_05650 SM00490 helicase superfamily c-terminal domain CDG55_05710 SM00382 ATPases associated with a variety of cellular activities CDG55_05780 SM00327 von Willebrand factor (vWF) type A domain CDG55_05790 SM00478 endonuclease III CDG55_05800 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDG55_05820 SM00382 ATPases associated with a variety of cellular activities CDG55_05820 SM00464 Found in ATP-dependent protease La (LON) CDG55_05835 SM00422 helix_turn_helix, mercury resistance CDG55_05840 SM00746 metallochaperone-like domain CDG55_05870 SM01011 Aminopeptidase P, N-terminal domain CDG55_05890 SM00422 helix_turn_helix, mercury resistance CDG55_05935 SM00479 CDG55_05935 CDG55_05940 SM00257 Lysin motif CDG55_05960 SM00382 ATPases associated with a variety of cellular activities CDG55_05980 SM00479 CDG55_05980 CDG55_05990 SM00267 diguanylate cyclase CDG55_06035 SM00463 Small MutS-related domain CDG55_06065 SM01230 CDG55_06065 CDG55_06135 SM00671 Sel1-like repeats. CDG55_06140 SM00487 DEAD-like helicases superfamily CDG55_06140 SM00490 helicase superfamily c-terminal domain CDG55_06165 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDG55_06175 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CDG55_06245 SM01091 Transporter associated domain CDG55_06270 SM00840 CDG55_06270 CDG55_06280 SM00116 Domain in cystathionine beta-synthase and other proteins. CDG55_06300 SM00382 ATPases associated with a variety of cellular activities CDG55_06335 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CDG55_06335 SM00534 ATPase domain of DNA mismatch repair MUTS family CDG55_06400 SM00563 Phosphate acyltransferases CDG55_06455 SM00220 Serine/Threonine protein kinases, catalytic domain CDG55_06525 SM00936 Penicillin-binding protein 5, C-terminal domain CDG55_06545 SM00257 Lysin motif CDG55_06580 SM00052 Putative diguanylate phosphodiesterase CDG55_06595 SM00841 Elongation factor P, C-terminal CDG55_06595 SM01185 CDG55_06595 CDG55_06620 SM00460 Transglutaminase/protease-like homologues CDG55_06750 SM00506 Appr-1"-p processing enzyme CDG55_06785 SM00382 ATPases associated with a variety of cellular activities CDG55_06790 SM00849 Metallo-beta-lactamase superfamily CDG55_06835 SM00387 Histidine kinase-like ATPases CDG55_06835 SM00388 His Kinase A (phosphoacceptor) domain CDG55_06840 SM00448 cheY-homologous receiver domain CDG55_06840 SM00862 Transcriptional regulatory protein, C terminal CDG55_06880 SM00382 ATPases associated with a variety of cellular activities CDG55_06935 SM00421 helix_turn_helix, Lux Regulon CDG55_06935 SM00448 cheY-homologous receiver domain CDG55_06990 SM00487 DEAD-like helicases superfamily CDG55_06990 SM00490 helicase superfamily c-terminal domain CDG55_06990 SM00982 CDG55_06990 CDG55_06990 SM01058 CarD-like/TRCF domain CDG55_07000 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDG55_07020 SM00271 DnaJ molecular chaperone homology domain CDG55_07055 SM00411 bacterial (prokaryotic) histone like domain CDG55_07080 SM00382 ATPases associated with a variety of cellular activities CDG55_07085 SM00363 S4 RNA-binding domain CDG55_07135 SM00822 CDG55_07135 CDG55_07160 SM00843 CDG55_07160 CDG55_07205 SM00855 Phosphoglycerate mutase family CDG55_07315 SM00481 DNA polymerase alpha chain like domain CDG55_07345 SM00729 Elongator protein 3, MiaB family, Radical SAM CDG55_07345 SM00876 Biotin and Thiamin Synthesis associated domain CDG55_07375 SM00357 Cold shock protein domain CDG55_07380 SM00357 Cold shock protein domain CDG55_07385 SM00357 Cold shock protein domain CDG55_07405 SM00937 CDG55_07405 CDG55_07415 SM00342 helix_turn_helix, arabinose operon control protein CDG55_07420 SM00822 CDG55_07420 CDG55_07435 SM00796 Allophanate hydrolase subunit 1 CDG55_07435 SM00797 Allophanate hydrolase subunit 2 CDG55_07440 SM00878 Biotin carboxylase C-terminal domain CDG55_07450 SM00100 Cyclic nucleotide-monophosphate binding domain CDG55_07450 SM00419 helix_turn_helix, cAMP Regulatory protein CDG55_07465 SM00382 ATPases associated with a variety of cellular activities CDG55_07465 SM01086 C-terminal, D2-small domain, of ClpB protein CDG55_07475 SM00981 CDG55_07475 CDG55_07540 SM00342 helix_turn_helix, arabinose operon control protein CDG55_07560 SM00382 ATPases associated with a variety of cellular activities CDG55_07560 SM00487 DEAD-like helicases superfamily CDG55_07560 SM00490 helicase superfamily c-terminal domain CDG55_07560 SM00847 Helicase associated domain (HA2) Add an annotation CDG55_07575 SM00729 Elongator protein 3, MiaB family, Radical SAM CDG55_07625 SM00382 ATPases associated with a variety of cellular activities CDG55_07640 SM00479 CDG55_07640 CDG55_07700 SM00861 Transketolase, pyrimidine binding domain CDG55_07725 SM00867 YceI-like domain CDG55_07760 SM00344 helix_turn_helix ASNC type CDG55_07780 SM00342 helix_turn_helix, arabinose operon control protein CDG55_07790 SM00382 ATPases associated with a variety of cellular activities CDG55_07825 SM00382 ATPases associated with a variety of cellular activities CDG55_07880 SM00830 Chorismate mutase type II CDG55_07935 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDG55_08005 SM00357 Cold shock protein domain CDG55_08010 SM00487 DEAD-like helicases superfamily CDG55_08010 SM00490 helicase superfamily c-terminal domain CDG55_08050 SM00470 ParB-like nuclease domain CDG55_08065 SM00382 ATPases associated with a variety of cellular activities CDG55_08125 SM00986 Uracil DNA glycosylase superfamily CDG55_08125 SM00987 UreE urease accessory protein, C-terminal domain CDG55_08150 SM00316 Ribosomal protein S1-like RNA-binding domain CDG55_08155 SM00411 bacterial (prokaryotic) histone like domain CDG55_08170 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CDG55_08185 SM00342 helix_turn_helix, arabinose operon control protein CDG55_08205 SM00347 helix_turn_helix multiple antibiotic resistance protein CDG55_08260 SM00116 Domain in cystathionine beta-synthase and other proteins. CDG55_08285 SM00382 ATPases associated with a variety of cellular activities CDG55_08285 SM00962 SRP54-type protein, GTPase domain CDG55_08285 SM00963 SRP54-type protein, helical bundle domain CDG55_08345 SM01264 CDG55_08345 CDG55_08415 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDG55_08435 SM00382 ATPases associated with a variety of cellular activities CDG55_08435 SM01086 C-terminal, D2-small domain, of ClpB protein CDG55_08495 SM01192 CDG55_08495 CDG55_08495 SM01193 CDG55_08495 CDG55_08525 SM00849 Metallo-beta-lactamase superfamily CDG55_08550 SM00796 Allophanate hydrolase subunit 1 CDG55_08550 SM00797 Allophanate hydrolase subunit 2 CDG55_08550 SM00878 Biotin carboxylase C-terminal domain CDG55_08555 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDG55_08555 SM00895 CDG55_08555 CDG55_08585 SM00903 Flavin reductase like domain CDG55_08625 SM00267 diguanylate cyclase CDG55_08645 SM00382 ATPases associated with a variety of cellular activities CDG55_08660 SM00341 Helicase and RNase D C-terminal CDG55_08660 SM00474 3'-5' exonuclease CDG55_08665 SM00493 CDG55_08665 CDG55_08690 SM01324 CDG55_08690 CDG55_08785 SM00855 Phosphoglycerate mutase family CDG55_08830 SM01006 Siderophore biosynthesis protein domain CDG55_08885 SM00342 helix_turn_helix, arabinose operon control protein CDG55_08905 SM00935 Outer membrane protein (OmpH-like) CDG55_08955 SM00729 Elongator protein 3, MiaB family, Radical SAM CDG55_08960 SM00091 PAS domain CDG55_08960 SM00387 Histidine kinase-like ATPases CDG55_08960 SM00388 His Kinase A (phosphoacceptor) domain CDG55_08965 SM00382 ATPases associated with a variety of cellular activities CDG55_08965 SM00448 cheY-homologous receiver domain CDG55_09040 SM00852 Probable molybdopterin binding domain CDG55_09045 SM00852 Probable molybdopterin binding domain CDG55_09060 SM00729 Elongator protein 3, MiaB family, Radical SAM CDG55_09070 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDG55_09090 SM00448 cheY-homologous receiver domain CDG55_09090 SM01012 CDG55_09090 CDG55_09110 SM00878 Biotin carboxylase C-terminal domain CDG55_09145 SM00226 Low molecular weight phosphatase family CDG55_09160 SM00382 ATPases associated with a variety of cellular activities CDG55_09165 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CDG55_09255 SM00905 Dihydroneopterin aldolase CDG55_09285 SM00829 Enoylreductase CDG55_09320 SM00829 Enoylreductase CDG55_09330 SM00829 Enoylreductase CDG55_09335 SM00829 Enoylreductase CDG55_09345 SM00822 CDG55_09345 CDG55_09350 SM00829 Enoylreductase CDG55_09370 SM00563 Phosphate acyltransferases CDG55_09380 SM00344 helix_turn_helix ASNC type CDG55_09395 SM00267 diguanylate cyclase CDG55_09410 SM00100 Cyclic nucleotide-monophosphate binding domain CDG55_09410 SM00419 helix_turn_helix, cAMP Regulatory protein CDG55_09435 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDG55_09450 SM00344 helix_turn_helix ASNC type CDG55_09555 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDG55_09560 SM00342 helix_turn_helix, arabinose operon control protein CDG55_09620 SM00853 MutL C terminal dimerisation domain CDG55_09620 SM01340 CDG55_09620 CDG55_09650 SM00363 S4 RNA-binding domain CDG55_09735 SM01005 Alanine racemase, C-terminal domain CDG55_09745 SM00460 Transglutaminase/protease-like homologues CDG55_09770 SM00788 Adenylosuccinate synthetase CDG55_09790 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDG55_09795 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CDG55_09885 SM01228 CDG55_09885 CDG55_09910 SM00798 AICARFT/IMPCHase bienzyme CDG55_09910 SM00851 MGS-like domain CDG55_09915 SM01209 CDG55_09915 CDG55_09915 SM01210 CDG55_09915 CDG55_09925 SM00382 ATPases associated with a variety of cellular activities CDG55_09925 SM00930 CDG55_09925 CDG55_09945 SM00849 Metallo-beta-lactamase superfamily CDG55_09955 SM00996 S-adenosyl-L-homocysteine hydrolase CDG55_09955 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CDG55_09970 SM00052 Putative diguanylate phosphodiesterase CDG55_09970 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDG55_09970 SM00091 PAS domain CDG55_09970 SM00267 diguanylate cyclase CDG55_09975 SM00919 Malic enzyme, NAD binding domain CDG55_09975 SM01274 CDG55_09975 CDG55_10030 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDG55_10080 SM00358 Double-stranded RNA binding motif CDG55_10080 SM00535 Ribonuclease III family CDG55_10095 SM00838 Elongation factor G C-terminus CDG55_10105 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDG55_10150 SM00382 ATPases associated with a variety of cellular activities CDG55_10220 SM01211 CDG55_10220 CDG55_10230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDG55_10235 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CDG55_10240 SM00382 ATPases associated with a variety of cellular activities CDG55_10365 SM00849 Metallo-beta-lactamase superfamily CDG55_10370 SM00382 ATPases associated with a variety of cellular activities CDG55_10425 SM00434 DNA Topoisomerase IV CDG55_10435 SM00893 Electron transfer flavoprotein domain CDG55_10440 SM00893 Electron transfer flavoprotein domain CDG55_10490 SM00382 ATPases associated with a variety of cellular activities CDG55_10495 SM00978 CDG55_10495 CDG55_10505 SM01018 B12 binding domain CDG55_10550 SM00342 helix_turn_helix, arabinose operon control protein CDG55_10565 SM00382 ATPases associated with a variety of cellular activities CDG55_10650 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDG55_10655 SM00344 helix_turn_helix ASNC type CDG55_10670 SM00919 Malic enzyme, NAD binding domain CDG55_10670 SM01274 CDG55_10670 CDG55_10775 SM00327 von Willebrand factor (vWF) type A domain CDG55_10790 SM00382 ATPases associated with a variety of cellular activities CDG55_10800 SM01103 CDG55_10800 CDG55_10815 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CDG55_10820 SM00851 MGS-like domain CDG55_10820 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDG55_10865 SM00244 prohibitin homologues CDG55_10870 SM00881 CoA binding domain CDG55_10890 SM00861 Transketolase, pyrimidine binding domain CDG55_10925 SM01324 CDG55_10925 CDG55_10940 SM00450 Rhodanese Homology Domain CDG55_11060 SM00014 Acid phosphatase homologues CDG55_11090 SM00822 CDG55_11090 CDG55_11130 SM00267 diguanylate cyclase CDG55_11150 SM00387 Histidine kinase-like ATPases CDG55_11150 SM00388 His Kinase A (phosphoacceptor) domain CDG55_11155 SM00448 cheY-homologous receiver domain CDG55_11155 SM00862 Transcriptional regulatory protein, C terminal CDG55_11175 SM00563 Phosphate acyltransferases CDG55_11190 SM00244 prohibitin homologues CDG55_11230 SM01230 CDG55_11230 CDG55_11235 SM00014 Acid phosphatase homologues CDG55_11240 SM00342 helix_turn_helix, arabinose operon control protein CDG55_11250 SM00448 cheY-homologous receiver domain CDG55_11250 SM00862 Transcriptional regulatory protein, C terminal CDG55_11255 SM00387 Histidine kinase-like ATPases CDG55_11255 SM00388 His Kinase A (phosphoacceptor) domain CDG55_11300 SM00316 Ribosomal protein S1-like RNA-binding domain CDG55_11335 SM00845 GatB domain CDG55_11475 SM00073 Histidine Phosphotransfer domain CDG55_11475 SM00260 Two component signalling adaptor domain CDG55_11475 SM00387 Histidine kinase-like ATPases CDG55_11475 SM00448 cheY-homologous receiver domain CDG55_11475 SM01231 CDG55_11475 CDG55_11480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDG55_11485 SM00260 Two component signalling adaptor domain CDG55_11490 SM00448 cheY-homologous receiver domain CDG55_11495 SM00448 cheY-homologous receiver domain CDG55_11545 SM00671 Sel1-like repeats. CDG55_11555 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CDG55_11555 SM01232 CDG55_11555 CDG55_11575 SM00838 Elongation factor G C-terminus CDG55_11645 SM00342 helix_turn_helix, arabinose operon control protein CDG55_11710 SM00957 SecA DEAD-like domain CDG55_11710 SM00958 SecA preprotein cross-linking domain CDG55_11720 SM00849 Metallo-beta-lactamase superfamily CDG55_11760 SM00342 helix_turn_helix, arabinose operon control protein CDG55_11775 SM00267 diguanylate cyclase CDG55_11820 SM00448 cheY-homologous receiver domain CDG55_11820 SM00862 Transcriptional regulatory protein, C terminal CDG55_11825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDG55_11825 SM00387 Histidine kinase-like ATPases CDG55_11825 SM00388 His Kinase A (phosphoacceptor) domain CDG55_11930 SM00984 UDP binding domain CDG55_11945 SM00387 Histidine kinase-like ATPases CDG55_11945 SM00388 His Kinase A (phosphoacceptor) domain CDG55_11950 SM00857 Resolvase, N terminal domain CDG55_11970 SM00400 zinc finger CDG55_12035 SM01323 CDG55_12035 CDG55_12060 SM00564 beta-propeller repeat CDG55_12085 SM00028 Tetratricopeptide repeats CDG55_12095 SM00562 CDG55_12095 CDG55_12105 SM00014 Acid phosphatase homologues CDG55_12120 SM00650 Ribosomal RNA adenine dimethylases CDG55_12175 SM00960 Roadblock/LC7 domain CDG55_12180 SM00878 Biotin carboxylase C-terminal domain CDG55_12190 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDG55_12300 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CDG55_12330 SM00729 Elongator protein 3, MiaB family, Radical SAM CDG55_12655 SM00226 Low molecular weight phosphatase family CDG55_12660 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDG55_12675 SM00052 Putative diguanylate phosphodiesterase CDG55_12675 SM00267 diguanylate cyclase CDG55_12730 SM00382 ATPases associated with a variety of cellular activities CDG55_12770 SM00360 RNA recognition motif CDG55_12795 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CDG55_12795 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CDG55_12795 SM00493 CDG55_12795 CDG55_12815 SM00382 ATPases associated with a variety of cellular activities CDG55_12820 SM00506 Appr-1"-p processing enzyme CDG55_12835 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDG55_12850 SM00870 CDG55_12850 CDG55_12860 SM00342 helix_turn_helix, arabinose operon control protein CDG55_12865 SM00316 Ribosomal protein S1-like RNA-binding domain CDG55_12880 SM01329 CDG55_12880 CDG55_12940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDG55_12945 SM01060 CDG55_12945 CDG55_12985 SM00363 S4 RNA-binding domain CDG55_12995 SM00316 Ribosomal protein S1-like RNA-binding domain CDG55_13015 SM00729 Elongator protein 3, MiaB family, Radical SAM CDG55_13065 SM00903 Flavin reductase like domain CDG55_13090 SM00849 Metallo-beta-lactamase superfamily CDG55_13165 SM00116 Domain in cystathionine beta-synthase and other proteins. CDG55_13165 SM01091 Transporter associated domain CDG55_13190 SM00487 DEAD-like helicases superfamily CDG55_13190 SM00490 helicase superfamily c-terminal domain CDG55_13210 SM00271 DnaJ molecular chaperone homology domain CDG55_13230 SM00316 Ribosomal protein S1-like RNA-binding domain CDG55_13230 SM00322 K homology RNA-binding domain CDG55_13235 SM01387 CDG55_13235 CDG55_13245 SM00382 ATPases associated with a variety of cellular activities CDG55_13360 SM00316 Ribosomal protein S1-like RNA-binding domain CDG55_13420 SM00967 RNA 2'-O ribose methyltransferase substrate binding CDG55_13440 SM00732 Likely ribonuclease with RNase H fold. CDG55_13500 SM00342 helix_turn_helix, arabinose operon control protein CDG55_13545 SM00346 helix_turn_helix isocitrate lyase regulation CDG55_13560 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CDG55_13560 SM00465 GIY-YIG type nucleases (URI domain) CDG55_13570 SM00267 diguanylate cyclase CDG55_13620 SM00387 Histidine kinase-like ATPases CDG55_13655 SM00663 RNA polymerase I subunit A N-terminus CDG55_13680 SM00649 Ribosomal protein L11/L12 CDG55_13685 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CDG55_13685 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CDG55_13735 SM00240 Forkhead associated domain CDG55_13745 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDG55_13755 SM00528 Domain in histone-like proteins of HNS family CDG55_13785 SM00448 cheY-homologous receiver domain CDG55_13785 SM00850 LytTr DNA-binding domain CDG55_13860 SM00899 CDG55_13860 CDG55_13895 SM00421 helix_turn_helix, Lux Regulon CDG55_13895 SM00448 cheY-homologous receiver domain CDG55_13900 SM00387 Histidine kinase-like ATPases CDG55_13900 SM00388 His Kinase A (phosphoacceptor) domain CDG55_13905 SM00382 ATPases associated with a variety of cellular activities CDG55_13905 SM00448 cheY-homologous receiver domain CDG55_13910 SM00245 tail specific protease CDG55_13975 SM00938 Nitrogen regulatory protein P-II CDG55_13985 SM00382 ATPases associated with a variety of cellular activities CDG55_14025 SM00434 DNA Topoisomerase IV CDG55_14040 SM01091 Transporter associated domain CDG55_14060 SM00641 Glycosyl hydrolases family 25 CDG55_14070 SM00448 cheY-homologous receiver domain CDG55_14070 SM00862 Transcriptional regulatory protein, C terminal CDG55_14080 SM00387 Histidine kinase-like ATPases CDG55_14080 SM00388 His Kinase A (phosphoacceptor) domain CDG55_14105 SM00729 Elongator protein 3, MiaB family, Radical SAM CDG55_14190 SM00387 Histidine kinase-like ATPases CDG55_14190 SM00388 His Kinase A (phosphoacceptor) domain CDG55_14190 SM00448 cheY-homologous receiver domain CDG55_14260 SM00382 ATPases associated with a variety of cellular activities CDG55_14310 SM00382 ATPases associated with a variety of cellular activities CDG55_14330 SM00836 DALR anticodon binding domain CDG55_14330 SM01016 Arginyl tRNA synthetase N terminal dom CDG55_14440 SM00530 Helix-turn-helix XRE-family like proteins CDG55_14500 SM00507 HNH nucleases CDG55_14520 SM00487 DEAD-like helicases superfamily CDG55_14520 SM00490 helicase superfamily c-terminal domain CDG55_14555 SM00020 Trypsin-like serine protease CDG55_14580 SM01091 Transporter associated domain CDG55_14605 SM00530 Helix-turn-helix XRE-family like proteins CDG55_14625 SM01005 Alanine racemase, C-terminal domain CDG55_14635 SM00344 helix_turn_helix ASNC type CDG55_14695 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDG55_14695 SM00895 CDG55_14695 CDG55_14720 SM00984 UDP binding domain CDG55_14785 SM00984 UDP binding domain CDG55_14795 SM00984 UDP binding domain CDG55_14810 SM00226 Low molecular weight phosphatase family CDG55_14835 SM00644 CDG55_14835 CDG55_14900 SM00062 Bacterial periplasmic substrate-binding proteins CDG55_14915 SM00382 ATPases associated with a variety of cellular activities CDG55_14925 SM00267 diguanylate cyclase CDG55_14935 SM00904 Riboflavin kinase CDG55_15025 SM00849 Metallo-beta-lactamase superfamily CDG55_15030 SM00235 Zinc-dependent metalloprotease CDG55_15055 SM01001 AIR carboxylase CDG55_15080 SM00855 Phosphoglycerate mutase family CDG55_15150 SM00175 Rab subfamily of small GTPases CDG55_15160 SM01234 CDG55_15160