locus-tag class description CDG62_00085 PF01555 DNA methylase CDG62_00085 PF18755 Restriction Enzyme Adenine Methylase Associated CDG62_00245 PF02954 Bacterial regulatory protein, Fis family CDG62_00305 PF13614 AAA domain CDG62_00330 PF01051 Initiator Replication protein CDG62_00445 PF01051 Initiator Replication protein CDG62_00460 PF01636 Phosphotransferase enzyme family CDG62_00465 PF00872 Transposase, Mutator family CDG62_00470 PF00239 Resolvase, N terminal domain CDG62_00470 PF02796 Helix-turn-helix domain of resolvase CDG62_00485 PF07690 Major Facilitator Superfamily CDG62_00490 PF00440 Bacterial regulatory proteins, tetR family CDG62_00490 PF02909 Tetracyclin repressor-like, C-terminal domain CDG62_00555 PF03389 MobA/MobL family CDG62_00565 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system CDG62_00575 PF12848 ABC transporter CDG62_00575 PF00005 ABC transporter CDG62_00595 PF01051 Initiator Replication protein CDG62_00615 PF03389 MobA/MobL family CDG62_00700 PF13610 DDE domain CDG62_00715 PF06463 Molybdenum Cofactor Synthesis C CDG62_00715 PF04055 Radical SAM superfamily CDG62_00720 PF02223 Thymidylate kinase CDG62_00730 PF10431 C-terminal, D2-small domain, of ClpB protein CDG62_00730 PF17871 AAA lid domain CDG62_00730 PF02861 Clp amino terminal domain, pathogenicity island component CDG62_00730 PF00004 ATPase family associated with various cellular activities (AAA) CDG62_00730 PF07724 AAA domain (Cdc48 subfamily) CDG62_00770 PF02796 Helix-turn-helix domain of resolvase CDG62_00770 PF00239 Resolvase, N terminal domain CDG62_00845 PF13635 Domain of unknown function (DUF4143) CDG62_00845 PF13173 AAA domain CDG62_00855 PF00665 Integrase core domain CDG62_00855 PF13936 Helix-turn-helix domain CDG62_00875 PF00118 TCP-1/cpn60 chaperonin family CDG62_00880 PF00166 Chaperonin 10 Kd subunit CDG62_00885 PF03091 CutA1 divalent ion tolerance protein CDG62_00890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDG62_00895 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CDG62_00905 PF00753 Metallo-beta-lactamase superfamily CDG62_00910 PF00665 Integrase core domain CDG62_00910 PF13936 Helix-turn-helix domain CDG62_00940 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDG62_00950 PF13610 DDE domain CDG62_00955 PF01545 Cation efflux family CDG62_00960 PF13411 MerR HTH family regulatory protein CDG62_00975 PF05973 Phage derived protein Gp49-like (DUF891) CDG62_01065 PF01435 Peptidase family M48 CDG62_01265 PF01545 Cation efflux family CDG62_01265 PF16916 Dimerisation domain of Zinc Transporter CDG62_01280 PF02321 Outer membrane efflux protein CDG62_01285 PF00873 AcrB/AcrD/AcrF family CDG62_01290 PF00529 HlyD membrane-fusion protein of T1SS CDG62_01290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDG62_01295 PF01545 Cation efflux family CDG62_01305 PF01022 Bacterial regulatory protein, arsR family CDG62_01310 PF00403 Heavy-metal-associated domain CDG62_01315 PF09278 MerR, DNA binding CDG62_01315 PF00376 MerR family regulatory protein CDG62_01335 PF00111 2Fe-2S iron-sulfur cluster binding domain CDG62_01390 PF13361 UvrD-like helicase C-terminal domain CDG62_01390 PF00580 UvrD/REP helicase N-terminal domain CDG62_01425 PF13614 AAA domain CDG62_01430 PF02195 ParB-like nuclease domain CDG62_01430 PF17762 HTH domain found in ParB protein CDG62_01450 PF00437 Type II/IV secretion system protein CDG62_01605 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CDG62_01625 PF00462 Glutaredoxin CDG62_01630 PF00111 2Fe-2S iron-sulfur cluster binding domain CDG62_01630 PF00175 Oxidoreductase NAD-binding domain CDG62_01630 PF00970 Oxidoreductase FAD-binding domain CDG62_01635 PF00174 Oxidoreductase molybdopterin binding domain CDG62_01650 PF00589 Phage integrase family CDG62_01650 PF13495 Phage integrase, N-terminal SAM-like domain CDG62_01675 PF08240 Alcohol dehydrogenase GroES-like domain CDG62_01675 PF00107 Zinc-binding dehydrogenase CDG62_01690 PF00043 Glutathione S-transferase, C-terminal domain CDG62_01690 PF02798 Glutathione S-transferase, N-terminal domain CDG62_01695 PF01625 Peptide methionine sulfoxide reductase CDG62_01700 PF01641 SelR domain CDG62_01705 PF01695 IstB-like ATP binding protein CDG62_01720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDG62_01720 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_01760 PF00186 Dihydrofolate reductase CDG62_01765 PF13340 Putative transposase of IS4/5 family (DUF4096) CDG62_01785 PF00717 Peptidase S24-like CDG62_01790 PF00817 impB/mucB/samB family CDG62_01790 PF11798 IMS family HHH motif CDG62_01790 PF11799 impB/mucB/samB family C-terminal domain CDG62_01790 PF13438 Domain of unknown function (DUF4113) CDG62_01810 PF00589 Phage integrase family CDG62_01810 PF13495 Phage integrase, N-terminal SAM-like domain CDG62_01825 PF00893 Small Multidrug Resistance protein CDG62_01830 PF00809 Pterin binding enzyme CDG62_01850 PF00664 ABC transporter transmembrane region CDG62_01850 PF00005 ABC transporter CDG62_01880 PF00809 Pterin binding enzyme CDG62_01935 PF13936 Helix-turn-helix domain CDG62_01935 PF00665 Integrase core domain CDG62_01940 PF01636 Phosphotransferase enzyme family CDG62_01945 PF00665 Integrase core domain CDG62_01945 PF13936 Helix-turn-helix domain CDG62_01980 PF00313 'Cold-shock' DNA-binding domain CDG62_02020 PF17841 BID domain of Bartonella effector protein (Bep) CDG62_02020 PF02661 Fic/DOC family CDG62_02110 PF00176 SNF2 family N-terminal domain CDG62_02110 PF18337 RapA N-terminal Tudor like domain CDG62_02110 PF00271 Helicase conserved C-terminal domain CDG62_02110 PF18339 RapA N-terminal Tudor like domain 1 CDG62_02110 PF12137 RNA polymerase recycling family C-terminal CDG62_02165 PF00565 Staphylococcal nuclease homologue CDG62_02210 PF12833 Helix-turn-helix domain CDG62_02210 PF02311 AraC-like ligand binding domain CDG62_02215 PF01625 Peptide methionine sulfoxide reductase CDG62_02225 PF00462 Glutaredoxin CDG62_02230 PF01641 SelR domain CDG62_02245 PF02803 Thiolase, C-terminal domain CDG62_02245 PF00108 Thiolase, N-terminal domain CDG62_02250 PF01625 Peptide methionine sulfoxide reductase CDG62_02255 PF00990 Diguanylate cyclase, GGDEF domain CDG62_02255 PF08448 PAS fold CDG62_02285 PF01381 Helix-turn-helix CDG62_02300 PF02384 N-6 DNA Methylase CDG62_02300 PF12161 HsdM N-terminal domain CDG62_02305 PF01420 Type I restriction modification DNA specificity domain CDG62_02320 PF18766 SWI2/SNF2 ATPase CDG62_02320 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CDG62_02320 PF11867 Domain of unknown function (DUF3387) CDG62_02345 PF01555 DNA methylase CDG62_02350 PF04851 Type III restriction enzyme, res subunit CDG62_02390 PF01131 DNA topoisomerase CDG62_02390 PF01751 Toprim domain CDG62_02390 PF01396 Topoisomerase DNA binding C4 zinc finger CDG62_02465 PF02899 Phage integrase, N-terminal SAM-like domain CDG62_02465 PF00589 Phage integrase family CDG62_02490 PF08239 Bacterial SH3 domain CDG62_02490 PF01520 N-acetylmuramoyl-L-alanine amidase CDG62_02525 PF09278 MerR, DNA binding CDG62_02525 PF00376 MerR family regulatory protein CDG62_02530 PF02411 MerT mercuric transport protein CDG62_02535 PF00403 Heavy-metal-associated domain CDG62_02540 PF03203 MerC mercury resistance protein CDG62_02545 PF00403 Heavy-metal-associated domain CDG62_02545 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_02545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDG62_02550 PF12324 Helix-turn-helix domain of alkylmercury lyase CDG62_02550 PF03243 Alkylmercury lyase CDG62_02555 PF13411 MerR HTH family regulatory protein CDG62_02560 PF05052 MerE protein CDG62_02570 PF11809 Domain of unknown function (DUF3330) CDG62_02570 PF00563 EAL domain CDG62_02585 PF13610 DDE domain CDG62_02600 PF00580 UvrD/REP helicase N-terminal domain CDG62_02600 PF13361 UvrD-like helicase C-terminal domain CDG62_02620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_02620 PF03466 LysR substrate binding domain CDG62_02625 PF07690 Major Facilitator Superfamily CDG62_02630 PF04444 Catechol dioxygenase N terminus CDG62_02630 PF00775 Dioxygenase CDG62_02635 PF01494 FAD binding domain CDG62_02640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_02640 PF03466 LysR substrate binding domain CDG62_02645 PF07690 Major Facilitator Superfamily CDG62_02650 PF01610 Transposase CDG62_02650 PF13542 Helix-turn-helix domain of transposase family ISL3 CDG62_02650 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CDG62_02655 PF00171 Aldehyde dehydrogenase family CDG62_02660 PF08240 Alcohol dehydrogenase GroES-like domain CDG62_02660 PF00107 Zinc-binding dehydrogenase CDG62_02670 PF13610 DDE domain CDG62_02680 PF13610 DDE domain CDG62_02690 PF07690 Major Facilitator Superfamily CDG62_02695 PF02321 Outer membrane efflux protein CDG62_02700 PF00873 AcrB/AcrD/AcrF family CDG62_02705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDG62_02705 PF00529 HlyD membrane-fusion protein of T1SS CDG62_02710 PF00486 Transcriptional regulatory protein, C terminal CDG62_02710 PF00072 Response regulator receiver domain CDG62_02715 PF00672 HAMP domain CDG62_02715 PF00512 His Kinase A (phospho-acceptor) domain CDG62_02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_02725 PF00239 Resolvase, N terminal domain CDG62_02725 PF02796 Helix-turn-helix domain of resolvase CDG62_02735 PF01636 Phosphotransferase enzyme family CDG62_02745 PF01381 Helix-turn-helix CDG62_02750 PF05973 Phage derived protein Gp49-like (DUF891) CDG62_02790 PF12833 Helix-turn-helix domain CDG62_02800 PF00905 Penicillin binding protein transpeptidase domain CDG62_02865 PF00962 Adenosine/AMP deaminase CDG62_02885 PF11638 DnaA N-terminal domain CDG62_02885 PF08299 Bacterial dnaA protein helix-turn-helix CDG62_02885 PF00308 Bacterial dnaA protein CDG62_02890 PF00712 DNA polymerase III beta subunit, N-terminal domain CDG62_02890 PF02768 DNA polymerase III beta subunit, C-terminal domain CDG62_02890 PF02767 DNA polymerase III beta subunit, central domain CDG62_02895 PF02463 RecF/RecN/SMC N terminal domain CDG62_02900 PF01751 Toprim domain CDG62_02900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_02900 PF18053 DNA gyrase B subunit insert domain CDG62_02900 PF00986 DNA gyrase B subunit, carboxyl terminus CDG62_02900 PF00204 DNA gyrase B CDG62_02910 PF12848 ABC transporter CDG62_02910 PF00005 ABC transporter CDG62_02930 PF01521 Iron-sulphur cluster biosynthesis CDG62_02945 PF00905 Penicillin binding protein transpeptidase domain CDG62_02950 PF00012 Hsp70 protein CDG62_02955 PF01025 GrpE CDG62_02970 PF07859 alpha/beta hydrolase fold CDG62_02980 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDG62_03010 PF07690 Major Facilitator Superfamily CDG62_03020 PF00209 Sodium:neurotransmitter symporter family CDG62_03065 PF01029 NusB family CDG62_03065 PF01189 16S rRNA methyltransferase RsmB/F CDG62_03070 PF02911 Formyl transferase, C-terminal domain CDG62_03070 PF00551 Formyl transferase CDG62_03075 PF00920 Dehydratase family CDG62_03080 PF00920 Dehydratase family CDG62_03090 PF07715 TonB-dependent Receptor Plug Domain CDG62_03090 PF00593 TonB dependent receptor CDG62_03100 PF03466 LysR substrate binding domain CDG62_03100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_03105 PF00860 Permease family CDG62_03110 PF00311 Phosphoenolpyruvate carboxylase CDG62_03115 PF00440 Bacterial regulatory proteins, tetR family CDG62_03120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDG62_03125 PF00873 AcrB/AcrD/AcrF family CDG62_03135 PF01556 DnaJ C terminal domain CDG62_03135 PF00684 DnaJ central domain CDG62_03135 PF00226 DnaJ domain CDG62_03145 PF05173 Dihydrodipicolinate reductase, C-terminus CDG62_03145 PF01113 Dihydrodipicolinate reductase, N-terminus CDG62_03160 PF00155 Aminotransferase class I and II CDG62_03165 PF00107 Zinc-binding dehydrogenase CDG62_03165 PF08240 Alcohol dehydrogenase GroES-like domain CDG62_03170 PF03352 Methyladenine glycosylase CDG62_03185 PF00633 Helix-hairpin-helix motif CDG62_03185 PF14815 NUDIX domain CDG62_03185 PF00730 HhH-GPD superfamily base excision DNA repair protein CDG62_03200 PF07043 Protein of unknown function (DUF1328) CDG62_03205 PF03692 Putative zinc- or iron-chelating domain CDG62_03210 PF00004 ATPase family associated with various cellular activities (AAA) CDG62_03210 PF12002 MgsA AAA+ ATPase C terminal CDG62_03210 PF16193 AAA C-terminal domain CDG62_03215 PF01810 LysE type translocator CDG62_03220 PF13404 AsnC-type helix-turn-helix domain CDG62_03220 PF01037 Lrp/AsnC ligand binding domain CDG62_03225 PF00005 ABC transporter CDG62_03230 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_03235 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_03240 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDG62_03250 PF01259 SAICAR synthetase CDG62_03260 PF00701 Dihydrodipicolinate synthetase family CDG62_03265 PF00857 Isochorismatase family CDG62_03270 PF01758 Sodium Bile acid symporter family CDG62_03275 PF13089 Polyphosphate kinase N-terminal domain CDG62_03275 PF17941 Polyphosphate kinase C-terminal domain 1 CDG62_03275 PF13090 Polyphosphate kinase C-terminal domain 2 CDG62_03275 PF02503 Polyphosphate kinase middle domain CDG62_03300 PF02580 D-Tyr-tRNA(Tyr) deacylase CDG62_03305 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CDG62_03305 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CDG62_03310 PF00581 Rhodanese-like domain CDG62_03315 PF02666 Phosphatidylserine decarboxylase CDG62_03320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_03320 PF00989 PAS fold CDG62_03320 PF11808 Phosphate regulon sensor protein PhoR CDG62_03320 PF00512 His Kinase A (phospho-acceptor) domain CDG62_03325 PF00072 Response regulator receiver domain CDG62_03325 PF00486 Transcriptional regulatory protein, C terminal CDG62_03335 PF00106 short chain dehydrogenase CDG62_03340 PF01554 MatE CDG62_03345 PF00155 Aminotransferase class I and II CDG62_03350 PF04286 Protein of unknown function (DUF445) CDG62_03365 PF04262 Glutamate-cysteine ligase CDG62_03370 PF02600 Disulfide bond formation protein DsbB CDG62_03380 PF05728 Uncharacterised protein family (UPF0227) CDG62_03385 PF00204 DNA gyrase B CDG62_03385 PF01751 Toprim domain CDG62_03385 PF00986 DNA gyrase B subunit, carboxyl terminus CDG62_03385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_03395 PF02653 Branched-chain amino acid transport system / permease component CDG62_03405 PF00005 ABC transporter CDG62_03405 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDG62_03410 PF00005 ABC transporter CDG62_03450 PF02683 Cytochrome C biogenesis protein transmembrane region CDG62_03450 PF11412 Disulphide bond corrector protein DsbC CDG62_03460 PF17151 Periplasmic sensor domain CDG62_03460 PF00990 Diguanylate cyclase, GGDEF domain CDG62_03465 PF02525 Flavodoxin-like fold CDG62_03470 PF07859 alpha/beta hydrolase fold CDG62_03480 PF03960 ArsC family CDG62_03485 PF03372 Endonuclease/Exonuclease/phosphatase family CDG62_03490 PF00156 Phosphoribosyl transferase domain CDG62_03495 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CDG62_03495 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CDG62_03500 PF00593 TonB dependent receptor CDG62_03500 PF07715 TonB-dependent Receptor Plug Domain CDG62_03510 PF01047 MarR family CDG62_03515 PF00255 Glutathione peroxidase CDG62_03520 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CDG62_03520 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CDG62_03525 PF03033 Glycosyltransferase family 28 N-terminal domain CDG62_03525 PF04101 Glycosyltransferase family 28 C-terminal domain CDG62_03530 PF01225 Mur ligase family, catalytic domain CDG62_03530 PF08245 Mur ligase middle domain CDG62_03530 PF02875 Mur ligase family, glutamate ligase domain CDG62_03535 PF07478 D-ala D-ala ligase C-terminus CDG62_03535 PF01820 D-ala D-ala ligase N-terminus CDG62_03540 PF03799 Cell division protein FtsQ CDG62_03540 PF08478 POTRA domain, FtsQ-type CDG62_03545 PF02491 SHS2 domain inserted in FTSA CDG62_03550 PF12327 FtsZ family, C-terminal domain CDG62_03550 PF00091 Tubulin/FtsZ family, GTPase domain CDG62_03555 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CDG62_03570 PF17831 Pyruvate dehydrogenase E1 component middle domain CDG62_03570 PF00456 Transketolase, thiamine diphosphate binding domain CDG62_03575 PF00364 Biotin-requiring enzyme CDG62_03575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CDG62_03575 PF02817 e3 binding domain CDG62_03580 PF01169 Uncharacterized protein family UPF0016 CDG62_03585 PF00258 Flavodoxin CDG62_03585 PF01613 Flavin reductase like domain CDG62_03590 PF03692 Putative zinc- or iron-chelating domain CDG62_03595 PF00571 CBS domain CDG62_03595 PF00478 IMP dehydrogenase / GMP reductase domain CDG62_03600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDG62_03600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDG62_03600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDG62_03600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDG62_03605 PF01243 Pyridoxamine 5'-phosphate oxidase CDG62_03605 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CDG62_03610 PF17768 RecJ OB domain CDG62_03610 PF01368 DHH family CDG62_03610 PF02272 DHHA1 domain CDG62_03635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDG62_03640 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CDG62_03645 PF04452 RNA methyltransferase CDG62_03650 PF00924 Mechanosensitive ion channel CDG62_03655 PF00501 AMP-binding enzyme CDG62_03655 PF13193 AMP-binding enzyme C-terminal domain CDG62_03655 PF16177 Acetyl-coenzyme A synthetase N-terminus CDG62_03660 PF00083 Sugar (and other) transporter CDG62_03665 PF01266 FAD dependent oxidoreductase CDG62_03675 PF00677 Lumazine binding domain CDG62_03690 PF00296 Luciferase-like monooxygenase CDG62_03695 PF03358 NADPH-dependent FMN reductase CDG62_03700 PF00196 Bacterial regulatory proteins, luxR family CDG62_03700 PF00072 Response regulator receiver domain CDG62_03710 PF00512 His Kinase A (phospho-acceptor) domain CDG62_03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_03710 PF09456 RcsC Alpha-Beta-Loop (ABL) CDG62_03710 PF00072 Response regulator receiver domain CDG62_03715 PF04341 Protein of unknown function, DUF485 CDG62_03720 PF00474 Sodium:solute symporter family CDG62_03730 PF02028 BCCT, betaine/carnitine/choline family transporter CDG62_03745 PF00990 Diguanylate cyclase, GGDEF domain CDG62_03745 PF17158 Membrane-associated sensor, integral membrane domain CDG62_03750 PF13286 Phosphohydrolase-associated domain CDG62_03750 PF01966 HD domain CDG62_03755 PF17760 UvrA interaction domain CDG62_03755 PF17755 UvrA DNA-binding domain CDG62_03765 PF08543 Phosphomethylpyrimidine kinase CDG62_03765 PF02581 Thiamine monophosphate synthase CDG62_03765 PF03070 TENA/THI-4/PQQC family CDG62_03775 PF07690 Major Facilitator Superfamily CDG62_03780 PF00436 Single-strand binding protein family CDG62_03785 PF00206 Lyase CDG62_03785 PF10415 Fumarase C C-terminus CDG62_03790 PF03466 LysR substrate binding domain CDG62_03790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_03795 PF00375 Sodium:dicarboxylate symporter family CDG62_03810 PF08267 Cobalamin-independent synthase, N-terminal domain CDG62_03810 PF01717 Cobalamin-independent synthase, Catalytic domain CDG62_03815 PF01613 Flavin reductase like domain CDG62_03820 PF00578 AhpC/TSA family CDG62_03820 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDG62_03825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_03825 PF03466 LysR substrate binding domain CDG62_03830 PF00857 Isochorismatase family CDG62_03835 PF02678 Pirin CDG62_03835 PF05726 Pirin C-terminal cupin domain CDG62_03840 PF01593 Flavin containing amine oxidoreductase CDG62_03865 PF13737 Transposase DDE domain CDG62_03880 PF00271 Helicase conserved C-terminal domain CDG62_03880 PF04851 Type III restriction enzyme, res subunit CDG62_03880 PF02151 UvrB/uvrC motif CDG62_03880 PF12344 Ultra-violet resistance protein B CDG62_03880 PF17757 UvrB interaction domain CDG62_03885 PF04851 Type III restriction enzyme, res subunit CDG62_03885 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CDG62_03885 PF08463 EcoEI R protein C-terminal CDG62_03885 PF00271 Helicase conserved C-terminal domain CDG62_03890 PF02384 N-6 DNA Methylase CDG62_03895 PF01420 Type I restriction modification DNA specificity domain CDG62_03910 PF00589 Phage integrase family CDG62_03910 PF13356 Arm DNA-binding domain CDG62_03920 PF02705 K+ potassium transporter CDG62_03940 PF00230 Major intrinsic protein CDG62_03960 PF00977 Histidine biosynthesis protein CDG62_03965 PF01636 Phosphotransferase enzyme family CDG62_03970 PF00313 'Cold-shock' DNA-binding domain CDG62_03980 PF13737 Transposase DDE domain CDG62_03985 PF00324 Amino acid permease CDG62_03990 PF01266 FAD dependent oxidoreductase CDG62_04000 PF01381 Helix-turn-helix CDG62_04005 PF00977 Histidine biosynthesis protein CDG62_04020 PF00117 Glutamine amidotransferase class-I CDG62_04025 PF00475 Imidazoleglycerol-phosphate dehydratase CDG62_04050 PF00583 Acetyltransferase (GNAT) family CDG62_04055 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CDG62_04055 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CDG62_04060 PF00672 HAMP domain CDG62_04060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_04060 PF00512 His Kinase A (phospho-acceptor) domain CDG62_04065 PF00486 Transcriptional regulatory protein, C terminal CDG62_04065 PF00072 Response regulator receiver domain CDG62_04070 PF16921 Tex protein YqgF-like domain CDG62_04070 PF09371 Tex-like protein N-terminal domain CDG62_04070 PF00575 S1 RNA binding domain CDG62_04070 PF17674 HHH domain CDG62_04085 PF00106 short chain dehydrogenase CDG62_04090 PF01053 Cys/Met metabolism PLP-dependent enzyme CDG62_04095 PF12848 ABC transporter CDG62_04095 PF00005 ABC transporter CDG62_04115 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDG62_04135 PF01795 MraW methylase family CDG62_04145 PF03717 Penicillin-binding Protein dimerisation domain CDG62_04145 PF00905 Penicillin binding protein transpeptidase domain CDG62_04150 PF01225 Mur ligase family, catalytic domain CDG62_04150 PF02875 Mur ligase family, glutamate ligase domain CDG62_04150 PF08245 Mur ligase middle domain CDG62_04155 PF08245 Mur ligase middle domain CDG62_04155 PF01225 Mur ligase family, catalytic domain CDG62_04155 PF02875 Mur ligase family, glutamate ligase domain CDG62_04160 PF00953 Glycosyl transferase family 4 CDG62_04165 PF13847 Methyltransferase domain CDG62_04170 PF00905 Penicillin binding protein transpeptidase domain CDG62_04170 PF00912 Transglycosylase CDG62_04170 PF17092 Penicillin-binding protein OB-like domain CDG62_04195 PF11741 AMIN domain CDG62_04195 PF00263 Bacterial type II and III secretion system protein CDG62_04195 PF07660 Secretin and TonB N terminus short domain CDG62_04195 PF03958 Bacterial type II/III secretion system short domain CDG62_04200 PF01202 Shikimate kinase CDG62_04205 PF01761 3-dehydroquinate synthase CDG62_04215 PF00310 Glutamine amidotransferases class-II CDG62_04215 PF01493 GXGXG motif CDG62_04215 PF04898 Glutamate synthase central domain CDG62_04215 PF01645 Conserved region in glutamate synthase CDG62_04220 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_04220 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDG62_04230 PF04011 LemA family CDG62_04235 PF04536 TPM domain CDG62_04250 PF15864 Protein glycosylation ligase CDG62_04250 PF11846 Virulence factor membrane-bound polymerase, C-terminal CDG62_04250 PF04932 O-Antigen ligase CDG62_04260 PF00210 Ferritin-like domain CDG62_04265 PF04324 BFD-like [2Fe-2S] binding domain CDG62_04270 PF01042 Endoribonuclease L-PSP CDG62_04275 PF13291 ACT domain CDG62_04275 PF04607 Region found in RelA / SpoT proteins CDG62_04275 PF02824 TGS domain CDG62_04280 PF01192 RNA polymerase Rpb6 CDG62_04285 PF00625 Guanylate kinase CDG62_04290 PF02401 LytB protein CDG62_04295 PF07963 Prokaryotic N-terminal methylation motif CDG62_04295 PF00114 Pilin (bacterial filament) CDG62_04325 PF00114 Pilin (bacterial filament) CDG62_04325 PF07963 Prokaryotic N-terminal methylation motif CDG62_04330 PF00886 Ribosomal protein S16 CDG62_04335 PF01782 RimM N-terminal domain CDG62_04335 PF05239 PRC-barrel domain CDG62_04340 PF01746 tRNA (Guanine-1)-methyltransferase CDG62_04345 PF01245 Ribosomal protein L19 CDG62_04350 PF00561 alpha/beta hydrolase fold CDG62_04355 PF00561 alpha/beta hydrolase fold CDG62_04360 PF03280 Proteobacterial lipase chaperone protein CDG62_04365 PF01509 TruB family pseudouridylate synthase (N terminal domain) CDG62_04365 PF16198 tRNA pseudouridylate synthase B C-terminal domain CDG62_04365 PF09157 Pseudouridine synthase II TruB, C-terminal CDG62_04370 PF01925 Sulfite exporter TauE/SafE CDG62_04380 PF00892 EamA-like transporter family CDG62_04385 PF00892 EamA-like transporter family CDG62_04390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDG62_04390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDG62_04395 PF02913 FAD linked oxidases, C-terminal domain CDG62_04395 PF01565 FAD binding domain CDG62_04405 PF00072 Response regulator receiver domain CDG62_04405 PF00196 Bacterial regulatory proteins, luxR family CDG62_04410 PF00083 Sugar (and other) transporter CDG62_04410 PF07690 Major Facilitator Superfamily CDG62_04415 PF07690 Major Facilitator Superfamily CDG62_04420 PF12823 Domain of unknown function (DUF3817) CDG62_04425 PF12805 FUSC-like inner membrane protein yccS CDG62_04430 PF00080 Copper/zinc superoxide dismutase (SODC) CDG62_04435 PF01594 AI-2E family transporter CDG62_04440 PF13614 AAA domain CDG62_04450 PF01209 ubiE/COQ5 methyltransferase family CDG62_04465 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CDG62_04470 PF01197 Ribosomal protein L31 CDG62_04475 PF03109 ABC1 family CDG62_04485 PF01554 MatE CDG62_04495 PF04055 Radical SAM superfamily CDG62_04495 PF06969 HemN C-terminal domain CDG62_04515 PF01965 DJ-1/PfpI family CDG62_04520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG62_04520 PF12806 Acetyl-CoA dehydrogenase C-terminal like CDG62_04520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG62_04520 PF02770 Acyl-CoA dehydrogenase, middle domain CDG62_04530 PF01488 Shikimate / quinate 5-dehydrogenase CDG62_04530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CDG62_04530 PF08501 Shikimate dehydrogenase substrate binding domain CDG62_04545 PF04055 Radical SAM superfamily CDG62_04545 PF06969 HemN C-terminal domain CDG62_04550 PF00925 GTP cyclohydrolase II CDG62_04555 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CDG62_04555 PF02779 Transketolase, pyrimidine binding domain CDG62_04555 PF02780 Transketolase, C-terminal domain CDG62_04560 PF00459 Inositol monophosphatase family CDG62_04565 PF00271 Helicase conserved C-terminal domain CDG62_04565 PF12343 Cold shock protein DEAD box A CDG62_04565 PF00270 DEAD/DEAH box helicase CDG62_04565 PF03880 DbpA RNA binding domain CDG62_04570 PF00005 ABC transporter CDG62_04575 PF02405 Permease MlaE CDG62_04580 PF02470 MlaD protein CDG62_04585 PF05494 MlaC protein CDG62_04595 PF01544 CorA-like Mg2+ transporter protein CDG62_04600 PF03641 Possible lysine decarboxylase CDG62_04610 PF00156 Phosphoribosyl transferase domain CDG62_04615 PF00271 Helicase conserved C-terminal domain CDG62_04615 PF17191 RecG wedge domain CDG62_04615 PF00270 DEAD/DEAH box helicase CDG62_04625 PF01757 Acyltransferase family CDG62_04630 PF01553 Acyltransferase CDG62_04640 PF00375 Sodium:dicarboxylate symporter family CDG62_04650 PF01926 50S ribosome-binding GTPase CDG62_04655 PF02082 Transcriptional regulator CDG62_04660 PF00970 Oxidoreductase FAD-binding domain CDG62_04660 PF00175 Oxidoreductase NAD-binding domain CDG62_04660 PF00042 Globin CDG62_04670 PF00106 short chain dehydrogenase CDG62_04675 PF05872 Bacterial protein of unknown function (DUF853) CDG62_04680 PF01053 Cys/Met metabolism PLP-dependent enzyme CDG62_04685 PF00117 Glutamine amidotransferase class-I CDG62_04690 PF00338 Ribosomal protein S10p/S20e CDG62_04695 PF00297 Ribosomal protein L3 CDG62_04700 PF00573 Ribosomal protein L4/L1 family CDG62_04705 PF00276 Ribosomal protein L23 CDG62_04710 PF00181 Ribosomal Proteins L2, RNA binding domain CDG62_04710 PF03947 Ribosomal Proteins L2, C-terminal domain CDG62_04715 PF00203 Ribosomal protein S19 CDG62_04720 PF00237 Ribosomal protein L22p/L17e CDG62_04725 PF00189 Ribosomal protein S3, C-terminal domain CDG62_04725 PF07650 KH domain CDG62_04730 PF00252 Ribosomal protein L16p/L10e CDG62_04735 PF00831 Ribosomal L29 protein CDG62_04740 PF00366 Ribosomal protein S17 CDG62_04745 PF00238 Ribosomal protein L14p/L23e CDG62_04750 PF00467 KOW motif CDG62_04750 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CDG62_04755 PF00673 ribosomal L5P family C-terminus CDG62_04755 PF00281 Ribosomal protein L5 CDG62_04760 PF00253 Ribosomal protein S14p/S29e CDG62_04765 PF00410 Ribosomal protein S8 CDG62_04770 PF00347 Ribosomal protein L6 CDG62_04775 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CDG62_04780 PF00333 Ribosomal protein S5, N-terminal domain CDG62_04780 PF03719 Ribosomal protein S5, C-terminal domain CDG62_04785 PF00327 Ribosomal protein L30p/L7e CDG62_04790 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CDG62_04795 PF00344 SecY translocase CDG62_04800 PF00444 Ribosomal protein L36 CDG62_04805 PF00416 Ribosomal protein S13/S18 CDG62_04810 PF00411 Ribosomal protein S11 CDG62_04815 PF01479 S4 domain CDG62_04815 PF00163 Ribosomal protein S4/S9 N-terminal domain CDG62_04820 PF01000 RNA polymerase Rpb3/RpoA insert domain CDG62_04820 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CDG62_04820 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CDG62_04825 PF01196 Ribosomal protein L17 CDG62_04830 PF00743 Flavin-binding monooxygenase-like CDG62_04840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG62_04840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG62_04840 PF02770 Acyl-CoA dehydrogenase, middle domain CDG62_04845 PF03937 Flavinator of succinate dehydrogenase CDG62_04875 PF09526 Probable metal-binding protein (DUF2387) CDG62_04880 PF01432 Peptidase family M3 CDG62_04885 PF04294 VanW like protein CDG62_04890 PF00773 RNB domain CDG62_04890 PF08206 Ribonuclease B OB domain CDG62_04890 PF17876 Cold shock domain CDG62_04890 PF00575 S1 RNA binding domain CDG62_04890 PF08461 Ribonuclease R winged-helix domain CDG62_04920 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDG62_04935 PF03631 Virulence factor BrkB CDG62_04940 PF03358 NADPH-dependent FMN reductase CDG62_04950 PF00990 Diguanylate cyclase, GGDEF domain CDG62_04950 PF07694 5TMR of 5TMR-LYT CDG62_04975 PF07715 TonB-dependent Receptor Plug Domain CDG62_04975 PF00593 TonB dependent receptor CDG62_04985 PF02130 Uncharacterized protein family UPF0054 CDG62_04990 PF02562 PhoH-like protein CDG62_04995 PF00919 Uncharacterized protein family UPF0004 CDG62_04995 PF01938 TRAM domain CDG62_04995 PF04055 Radical SAM superfamily CDG62_05000 PF01464 Transglycosylase SLT domain CDG62_05000 PF10145 Phage-related minor tail protein CDG62_05000 PF01551 Peptidase family M23 CDG62_05010 PF00056 lactate/malate dehydrogenase, NAD binding domain CDG62_05010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CDG62_05035 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CDG62_05040 PF01066 CDP-alcohol phosphatidyltransferase CDG62_05080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDG62_05080 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_05090 PF04273 Putative phosphatase (DUF442) CDG62_05090 PF00753 Metallo-beta-lactamase superfamily CDG62_05100 PF00085 Thioredoxin CDG62_05105 PF03061 Thioesterase superfamily CDG62_05120 PF04461 Protein of unknown function (DUF520) CDG62_05130 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CDG62_05130 PF01266 FAD dependent oxidoreductase CDG62_05140 PF03795 YCII-related domain CDG62_05145 PF04279 Intracellular septation protein A CDG62_05150 PF02811 PHP domain CDG62_05155 PF01062 Bestrophin, RFP-TM, chloride channel CDG62_05160 PF04002 RadC-like JAB domain CDG62_05165 PF04127 DNA / pantothenate metabolism flavoprotein CDG62_05165 PF02441 Flavoprotein CDG62_05175 PF02556 Preprotein translocase subunit SecB CDG62_05180 PF00462 Glutaredoxin CDG62_05190 PF03193 RsgA GTPase CDG62_05195 PF00929 Exonuclease CDG62_05210 PF02321 Outer membrane efflux protein CDG62_05215 PF12704 MacB-like periplasmic core domain CDG62_05215 PF02687 FtsX-like permease family CDG62_05215 PF00005 ABC transporter CDG62_05220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDG62_05240 PF08264 Anticodon-binding domain of tRNA CDG62_05240 PF00133 tRNA synthetases class I (I, L, M and V) CDG62_05240 PF13603 Leucyl-tRNA synthetase, Domain 2 CDG62_05240 PF09334 tRNA synthetases class I (M) CDG62_05250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDG62_05250 PF00205 Thiamine pyrophosphate enzyme, central domain CDG62_05250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDG62_05255 PF10369 Small subunit of acetolactate synthase CDG62_05260 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CDG62_05260 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CDG62_05290 PF00534 Glycosyl transferases group 1 CDG62_05290 PF13439 Glycosyltransferase Family 4 CDG62_05295 PF01569 PAP2 superfamily CDG62_05300 PF04384 Iron-sulphur cluster assembly CDG62_05305 PF00334 Nucleoside diphosphate kinase CDG62_05310 PF04055 Radical SAM superfamily CDG62_05320 PF13464 Domain of unknown function (DUF4115) CDG62_05325 PF04551 GcpE protein CDG62_05330 PF03129 Anticodon binding domain CDG62_05330 PF13393 Histidyl-tRNA synthetase CDG62_05340 PF13360 PQQ-like domain CDG62_05340 PF01011 PQQ enzyme repeat CDG62_05345 PF01926 50S ribosome-binding GTPase CDG62_05345 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDG62_05355 PF07549 SecD/SecF GG Motif CDG62_05355 PF02355 Protein export membrane protein CDG62_05360 PF07549 SecD/SecF GG Motif CDG62_05360 PF02355 Protein export membrane protein CDG62_05360 PF13721 SecD export protein N-terminal TM region CDG62_05365 PF02699 Preprotein translocase subunit CDG62_05370 PF01702 Queuine tRNA-ribosyltransferase CDG62_05375 PF04011 LemA family CDG62_05385 PF02547 Queuosine biosynthesis protein CDG62_05395 PF00512 His Kinase A (phospho-acceptor) domain CDG62_05395 PF00672 HAMP domain CDG62_05395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_05395 PF13426 PAS domain CDG62_05400 PF03710 Glutamate-ammonia ligase adenylyltransferase CDG62_05400 PF08335 GlnD PII-uridylyltransferase CDG62_05405 PF01063 Amino-transferase class IV CDG62_05410 PF13737 Transposase DDE domain CDG62_05420 PF01370 NAD dependent epimerase/dehydratase family CDG62_05425 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDG62_05425 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDG62_05425 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDG62_05435 PF17102 Stealth protein CR3, conserved region 3 CDG62_05435 PF11380 Stealth protein CR2, conserved region 2 CDG62_05435 PF17101 Stealth protein CR1, conserved region 1 CDG62_05435 PF17103 Stealth protein CR4, conserved region 4 CDG62_05445 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CDG62_05450 PF16363 GDP-mannose 4,6 dehydratase CDG62_05455 PF00483 Nucleotidyl transferase CDG62_05460 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CDG62_05465 PF00132 Bacterial transferase hexapeptide (six repeats) CDG62_05470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CDG62_05475 PF00535 Glycosyl transferase family 2 CDG62_05500 PF02938 GAD domain CDG62_05500 PF01336 OB-fold nucleic acid binding domain CDG62_05500 PF00152 tRNA synthetases class II (D, K and N) CDG62_05510 PF00593 TonB dependent receptor CDG62_05510 PF07715 TonB-dependent Receptor Plug Domain CDG62_05530 PF06146 Phosphate-starvation-inducible E CDG62_05535 PF02770 Acyl-CoA dehydrogenase, middle domain CDG62_05535 PF12806 Acetyl-CoA dehydrogenase C-terminal like CDG62_05535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG62_05535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG62_05540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG62_05540 PF12806 Acetyl-CoA dehydrogenase C-terminal like CDG62_05540 PF02770 Acyl-CoA dehydrogenase, middle domain CDG62_05540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG62_05550 PF00512 His Kinase A (phospho-acceptor) domain CDG62_05550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_05550 PF00672 HAMP domain CDG62_05555 PF00072 Response regulator receiver domain CDG62_05555 PF00486 Transcriptional regulatory protein, C terminal CDG62_05560 PF00324 Amino acid permease CDG62_05565 PF04237 YjbR CDG62_05570 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CDG62_05590 PF01923 Cobalamin adenosyltransferase CDG62_05595 PF07715 TonB-dependent Receptor Plug Domain CDG62_05595 PF00593 TonB dependent receptor CDG62_05600 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CDG62_05605 PF00291 Pyridoxal-phosphate dependent enzyme CDG62_05620 PF11893 Domain of unknown function (DUF3413) CDG62_05620 PF00884 Sulfatase CDG62_05640 PF00290 Tryptophan synthase alpha chain CDG62_05645 PF01039 Carboxyl transferase domain CDG62_05650 PF08245 Mur ligase middle domain CDG62_05650 PF02875 Mur ligase family, glutamate ligase domain CDG62_05665 PF00753 Metallo-beta-lactamase superfamily CDG62_05670 PF00578 AhpC/TSA family CDG62_05670 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDG62_05680 PF02810 SEC-C motif CDG62_05680 PF07517 SecA DEAD-like domain CDG62_05680 PF01043 SecA preprotein cross-linking domain CDG62_05680 PF07516 SecA Wing and Scaffold domain CDG62_05690 PF01960 ArgJ family CDG62_05695 PF02445 Quinolinate synthetase A protein CDG62_05725 PF00990 Diguanylate cyclase, GGDEF domain CDG62_05725 PF17152 Periplasmic sensor domain CDG62_05730 PF13689 YfiR/HmsC-like CDG62_05795 PF04386 Stringent starvation protein B CDG62_05800 PF02798 Glutathione S-transferase, N-terminal domain CDG62_05800 PF00043 Glutathione S-transferase, C-terminal domain CDG62_05810 PF00380 Ribosomal protein S9/S16 CDG62_05815 PF00572 Ribosomal protein L13 CDG62_05820 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CDG62_05825 PF00398 Ribosomal RNA adenine dimethylase CDG62_05830 PF00149 Calcineurin-like phosphoesterase CDG62_05855 PF16360 GTP-binding GTPase Middle Region CDG62_05855 PF13167 GTP-binding GTPase N-terminal CDG62_05855 PF01926 50S ribosome-binding GTPase CDG62_05865 PF13091 PLD-like domain CDG62_05870 PF00149 Calcineurin-like phosphoesterase CDG62_05870 PF10518 TAT (twin-arginine translocation) pathway signal sequence CDG62_05880 PF00083 Sugar (and other) transporter CDG62_05880 PF07690 Major Facilitator Superfamily CDG62_05885 PF03006 Haemolysin-III related CDG62_05895 PF13673 Acetyltransferase (GNAT) domain CDG62_05905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDG62_05905 PF00378 Enoyl-CoA hydratase/isomerase CDG62_05905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDG62_05910 PF02803 Thiolase, C-terminal domain CDG62_05910 PF00108 Thiolase, N-terminal domain CDG62_05915 PF12833 Helix-turn-helix domain CDG62_05915 PF02311 AraC-like ligand binding domain CDG62_05920 PF02515 CoA-transferase family III CDG62_05925 PF04966 Carbohydrate-selective porin, OprB family CDG62_05930 PF01011 PQQ enzyme repeat CDG62_05935 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDG62_05935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDG62_05945 PF00893 Small Multidrug Resistance protein CDG62_05955 PF02803 Thiolase, C-terminal domain CDG62_05955 PF00108 Thiolase, N-terminal domain CDG62_05965 PF00691 OmpA family CDG62_05965 PF13505 Outer membrane protein beta-barrel domain CDG62_05970 PF00324 Amino acid permease CDG62_05975 PF08468 Methyltransferase small domain N-terminal CDG62_05975 PF05175 Methyltransferase small domain CDG62_05980 PF00860 Permease family CDG62_05990 PF01741 Large-conductance mechanosensitive channel, MscL CDG62_06000 PF00639 PPIC-type PPIASE domain CDG62_06000 PF09312 SurA N-terminal domain CDG62_06005 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CDG62_06005 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CDG62_06005 PF06827 Zinc finger found in FPG and IleRS CDG62_06010 PF04966 Carbohydrate-selective porin, OprB family CDG62_06015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDG62_06050 PF00694 Aconitase C-terminal domain CDG62_06050 PF00330 Aconitase family (aconitate hydratase) CDG62_06100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDG62_06105 PF00849 RNA pseudouridylate synthase CDG62_06125 PF04343 Protein of unknown function, DUF488 CDG62_06130 PF08274 PhnA Zinc-Ribbon CDG62_06130 PF03831 PhnA domain CDG62_06140 PF07411 Domain of unknown function (DUF1508) CDG62_06160 PF01207 Dihydrouridine synthase (Dus) CDG62_06170 PF13737 Transposase DDE domain CDG62_06180 PF02881 SRP54-type protein, helical bundle domain CDG62_06180 PF00448 SRP54-type protein, GTPase domain CDG62_06180 PF02978 Signal peptide binding domain CDG62_06190 PF03309 Type III pantothenate kinase CDG62_06200 PF01925 Sulfite exporter TauE/SafE CDG62_06210 PF06470 SMC proteins Flexible Hinge Domain CDG62_06210 PF02463 RecF/RecN/SMC N terminal domain CDG62_06215 PF04354 ZipA, C-terminal FtsZ-binding domain CDG62_06220 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CDG62_06220 PF03120 NAD-dependent DNA ligase OB-fold domain CDG62_06220 PF00533 BRCA1 C Terminus (BRCT) domain CDG62_06220 PF12826 Helix-hairpin-helix motif CDG62_06220 PF01653 NAD-dependent DNA ligase adenylation domain CDG62_06225 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CDG62_06230 PF07715 TonB-dependent Receptor Plug Domain CDG62_06230 PF00593 TonB dependent receptor CDG62_06245 PF00210 Ferritin-like domain CDG62_06250 PF00578 AhpC/TSA family CDG62_06255 PF08241 Methyltransferase domain CDG62_06255 PF12697 Alpha/beta hydrolase family CDG62_06260 PF04055 Radical SAM superfamily CDG62_06260 PF00202 Aminotransferase class-III CDG62_06260 PF06968 Biotin and Thiamin Synthesis associated domain CDG62_06265 PF00155 Aminotransferase class I and II CDG62_06280 PF02472 Biopolymer transport protein ExbD/TolR CDG62_06285 PF02472 Biopolymer transport protein ExbD/TolR CDG62_06290 PF01618 MotA/TolQ/ExbB proton channel family CDG62_06300 PF07715 TonB-dependent Receptor Plug Domain CDG62_06300 PF00593 TonB dependent receptor CDG62_06320 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_06325 PF12911 N-terminal TM domain of oligopeptide transport permease C CDG62_06325 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_06330 PF00005 ABC transporter CDG62_06330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDG62_06335 PF01479 S4 domain CDG62_06335 PF00849 RNA pseudouridylate synthase CDG62_06340 PF04079 Segregation and condensation complex subunit ScpB CDG62_06345 PF02616 Segregation and condensation protein ScpA CDG62_06355 PF01300 Telomere recombination CDG62_06360 PF04315 Elongation factor P hydroxylase CDG62_06365 PF02620 Large ribosomal RNA subunit accumulation protein YceD CDG62_06370 PF01783 Ribosomal L32p protein family CDG62_06375 PF00698 Acyl transferase domain CDG62_06385 PF00550 Phosphopantetheine attachment site CDG62_06390 PF01476 LysM domain CDG62_06390 PF04972 BON domain CDG62_06395 PF00392 Bacterial regulatory proteins, gntR family CDG62_06395 PF07729 FCD domain CDG62_06400 PF02785 Biotin carboxylase C-terminal domain CDG62_06400 PF00289 Biotin carboxylase, N-terminal domain CDG62_06400 PF00364 Biotin-requiring enzyme CDG62_06400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDG62_06405 PF01425 Amidase CDG62_06415 PF13737 Transposase DDE domain CDG62_06425 PF00268 Ribonucleotide reductase, small chain CDG62_06430 PF02867 Ribonucleotide reductase, barrel domain CDG62_06430 PF03477 ATP cone domain CDG62_06430 PF00317 Ribonucleotide reductase, all-alpha domain CDG62_06435 PF00486 Transcriptional regulatory protein, C terminal CDG62_06435 PF00072 Response regulator receiver domain CDG62_06440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_06440 PF00512 His Kinase A (phospho-acceptor) domain CDG62_06440 PF00672 HAMP domain CDG62_06450 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CDG62_06455 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CDG62_06460 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CDG62_06460 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CDG62_06470 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDG62_06470 PF10531 SLBB domain CDG62_06470 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDG62_06475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDG62_06475 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDG62_06475 PF00384 Molybdopterin oxidoreductase CDG62_06480 PF00146 NADH dehydrogenase CDG62_06485 PF12838 4Fe-4S dicluster domain CDG62_06490 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CDG62_06495 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CDG62_06500 PF00361 Proton-conducting membrane transporter CDG62_06500 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CDG62_06505 PF00361 Proton-conducting membrane transporter CDG62_06510 PF00361 Proton-conducting membrane transporter CDG62_06520 PF00313 'Cold-shock' DNA-binding domain CDG62_06525 PF00313 'Cold-shock' DNA-binding domain CDG62_06530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_06530 PF03466 LysR substrate binding domain CDG62_06535 PF00175 Oxidoreductase NAD-binding domain CDG62_06535 PF00970 Oxidoreductase FAD-binding domain CDG62_06555 PF00133 tRNA synthetases class I (I, L, M and V) CDG62_06555 PF08264 Anticodon-binding domain of tRNA CDG62_06555 PF10458 Valyl tRNA synthetase tRNA binding arm CDG62_06575 PF01906 Putative heavy-metal-binding CDG62_06580 PF01906 Putative heavy-metal-binding CDG62_06585 PF02321 Outer membrane efflux protein CDG62_06590 PF00873 AcrB/AcrD/AcrF family CDG62_06595 PF00529 HlyD membrane-fusion protein of T1SS CDG62_06595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDG62_06600 PF01569 PAP2 superfamily CDG62_06610 PF00348 Polyprenyl synthetase CDG62_06615 PF00829 Ribosomal prokaryotic L21 protein CDG62_06620 PF01016 Ribosomal L27 protein CDG62_06630 PF13018 Extended Signal Peptide of Type V secretion system CDG62_06630 PF03895 YadA-like membrane anchor domain CDG62_06630 PF05658 Head domain of trimeric autotransporter adhesin CDG62_06630 PF05662 Coiled stalk of trimeric autotransporter adhesin CDG62_06635 PF03548 Outer membrane lipoprotein carrier protein LolA CDG62_06645 PF02403 Seryl-tRNA synthetase N-terminal domain CDG62_06645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDG62_06650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDG62_06650 PF10414 Sirohaem synthase dimerisation region CDG62_06650 PF14824 Sirohaem biosynthesis protein central CDG62_06655 PF00588 SpoU rRNA Methylase family CDG62_06670 PF03358 NADPH-dependent FMN reductase CDG62_06675 PF13520 Amino acid permease CDG62_06680 PF00465 Iron-containing alcohol dehydrogenase CDG62_06690 PF03099 Biotin/lipoate A/B protein ligase family CDG62_06695 PF04359 Protein of unknown function (DUF493) CDG62_06700 PF03979 Sigma-70 factor, region 1.1 CDG62_06700 PF04546 Sigma-70, non-essential region CDG62_06700 PF04542 Sigma-70 region 2 CDG62_06700 PF00140 Sigma-70 factor, region 1.2 CDG62_06700 PF04545 Sigma-70, region 4 CDG62_06700 PF04539 Sigma-70 region 3 CDG62_06725 PF09335 SNARE associated Golgi protein CDG62_06745 PF01810 LysE type translocator CDG62_06750 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CDG62_06765 PF02261 Aspartate decarboxylase CDG62_06770 PF01195 Peptidyl-tRNA hydrolase CDG62_06775 PF01386 Ribosomal L25p family CDG62_06780 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CDG62_06780 PF14572 Phosphoribosyl synthetase-associated domain CDG62_06805 PF00288 GHMP kinases N terminal domain CDG62_06805 PF08544 GHMP kinases C terminal CDG62_06810 PF03550 Outer membrane lipoprotein LolB CDG62_06820 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CDG62_06820 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CDG62_06820 PF01488 Shikimate / quinate 5-dehydrogenase CDG62_06825 PF10410 DnaB-helicase binding domain of primase CDG62_06825 PF08278 DNA primase DnaG DnaB-binding CDG62_06825 PF08275 DNA primase catalytic core, N-terminal domain CDG62_06825 PF01807 CHC2 zinc finger CDG62_06830 PF13525 Outer membrane lipoprotein CDG62_06835 PF00849 RNA pseudouridylate synthase CDG62_06835 PF01479 S4 domain CDG62_06845 PF03358 NADPH-dependent FMN reductase CDG62_06850 PF01668 SmpB protein CDG62_06855 PF01467 Cytidylyltransferase-like CDG62_06860 PF00037 4Fe-4S binding domain CDG62_06885 PF00795 Carbon-nitrogen hydrolase CDG62_06885 PF02540 NAD synthase CDG62_06900 PF00106 short chain dehydrogenase CDG62_06905 PF00743 Flavin-binding monooxygenase-like CDG62_06910 PF00285 Citrate synthase, C-terminal domain CDG62_06915 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CDG62_06920 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CDG62_06925 PF00890 FAD binding domain CDG62_06925 PF02910 Fumarate reductase flavoprotein C-term CDG62_06930 PF13085 2Fe-2S iron-sulfur cluster binding domain CDG62_06935 PF00676 Dehydrogenase E1 component CDG62_06935 PF16078 2-oxoglutarate dehydrogenase N-terminus CDG62_06935 PF02779 Transketolase, pyrimidine binding domain CDG62_06935 PF16870 2-oxoglutarate dehydrogenase C-terminal CDG62_06940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CDG62_06940 PF00364 Biotin-requiring enzyme CDG62_06940 PF02817 e3 binding domain CDG62_06945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDG62_06945 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_06950 PF08442 ATP-grasp domain CDG62_06950 PF00549 CoA-ligase CDG62_06955 PF00549 CoA-ligase CDG62_06955 PF02629 CoA binding domain CDG62_06965 PF01145 SPFH domain / Band 7 family CDG62_06965 PF15975 Flotillin CDG62_06970 PF07290 Protein of unknown function (DUF1449) CDG62_06975 PF00579 tRNA synthetases class I (W and Y) CDG62_06980 PF05661 Protein of unknown function (DUF808) CDG62_06985 PF04228 Putative neutral zinc metallopeptidase CDG62_06995 PF00999 Sodium/hydrogen exchanger family CDG62_07000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CDG62_07015 PF00132 Bacterial transferase hexapeptide (six repeats) CDG62_07020 PF01272 Transcription elongation factor, GreA/GreB, C-term CDG62_07020 PF03449 Transcription elongation factor, N-terminal CDG62_07025 PF02142 MGS-like domain CDG62_07025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDG62_07025 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDG62_07030 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CDG62_07030 PF00117 Glutamine amidotransferase class-I CDG62_07045 PF01985 CRS1 / YhbY (CRM) domain CDG62_07050 PF01728 FtsJ-like methyltransferase CDG62_07055 PF06480 FtsH Extracellular CDG62_07055 PF17862 AAA+ lid domain CDG62_07055 PF00004 ATPase family associated with various cellular activities (AAA) CDG62_07055 PF01434 Peptidase family M41 CDG62_07060 PF00809 Pterin binding enzyme CDG62_07080 PF09423 PhoD-like phosphatase CDG62_07080 PF16655 PhoD-like phosphatase, N-terminal domain CDG62_07100 PF03600 Citrate transporter CDG62_07105 PF00571 CBS domain CDG62_07105 PF03471 Transporter associated domain CDG62_07105 PF01595 Cyclin M transmembrane N-terminal domain CDG62_07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_07110 PF03466 LysR substrate binding domain CDG62_07115 PF00463 Isocitrate lyase family CDG62_07120 PF01219 Prokaryotic diacylglycerol kinase CDG62_07125 PF03009 Glycerophosphoryl diester phosphodiesterase family CDG62_07130 PF00873 AcrB/AcrD/AcrF family CDG62_07135 PF00571 CBS domain CDG62_07135 PF03448 MgtE intracellular N domain CDG62_07135 PF01769 Divalent cation transporter CDG62_07150 PF01435 Peptidase family M48 CDG62_07155 PF01464 Transglycosylase SLT domain CDG62_07155 PF10145 Phage-related minor tail protein CDG62_07155 PF01551 Peptidase family M23 CDG62_07160 PF01171 PP-loop family CDG62_07170 PF01464 Transglycosylase SLT domain CDG62_07170 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDG62_07175 PF01272 Transcription elongation factor, GreA/GreB, C-term CDG62_07175 PF03449 Transcription elongation factor, N-terminal CDG62_07205 PF16925 Tetracyclin repressor-like, C-terminal domain CDG62_07205 PF00440 Bacterial regulatory proteins, tetR family CDG62_07210 PF00109 Beta-ketoacyl synthase, N-terminal domain CDG62_07210 PF02801 Beta-ketoacyl synthase, C-terminal domain CDG62_07210 PF08659 KR domain CDG62_07210 PF00107 Zinc-binding dehydrogenase CDG62_07210 PF08240 Alcohol dehydrogenase GroES-like domain CDG62_07210 PF00550 Phosphopantetheine attachment site CDG62_07210 PF00698 Acyl transferase domain CDG62_07210 PF16197 Ketoacyl-synthetase C-terminal extension CDG62_07210 PF14765 Polyketide synthase dehydratase CDG62_07220 PF17954 Quercetinase C-terminal cupin domain CDG62_07220 PF02678 Pirin CDG62_07235 PF01208 Uroporphyrinogen decarboxylase (URO-D) CDG62_07240 PF05675 Protein of unknown function (DUF817) CDG62_07255 PF00990 Diguanylate cyclase, GGDEF domain CDG62_07265 PF01227 GTP cyclohydrolase I CDG62_07275 PF00106 short chain dehydrogenase CDG62_07280 PF13193 AMP-binding enzyme C-terminal domain CDG62_07280 PF00501 AMP-binding enzyme CDG62_07295 PF00196 Bacterial regulatory proteins, luxR family CDG62_07300 PF00218 Indole-3-glycerol phosphate synthase CDG62_07305 PF02885 Glycosyl transferase family, helical bundle domain CDG62_07305 PF00591 Glycosyl transferase family, a/b domain CDG62_07310 PF00117 Glutamine amidotransferase class-I CDG62_07325 PF04345 Chorismate lyase CDG62_07330 PF01040 UbiA prenyltransferase family CDG62_07370 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CDG62_07370 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CDG62_07375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CDG62_07375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CDG62_07380 PF01784 NIF3 (NGG1p interacting factor 3) CDG62_07385 PF17820 PDZ domain CDG62_07385 PF13180 PDZ domain CDG62_07395 PF18073 Rubredoxin metal binding domain CDG62_07400 PF01235 Sodium:alanine symporter family CDG62_07405 PF00324 Amino acid permease CDG62_07415 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CDG62_07415 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CDG62_07420 PF01678 Diaminopimelate epimerase CDG62_07425 PF02899 Phage integrase, N-terminal SAM-like domain CDG62_07425 PF00589 Phage integrase family CDG62_07435 PF13302 Acetyltransferase (GNAT) domain CDG62_07440 PF01037 Lrp/AsnC ligand binding domain CDG62_07445 PF01810 LysE type translocator CDG62_07450 PF01012 Electron transfer flavoprotein domain CDG62_07455 PF00766 Electron transfer flavoprotein FAD-binding domain CDG62_07455 PF01012 Electron transfer flavoprotein domain CDG62_07465 PF00521 DNA gyrase/topoisomerase IV, subunit A CDG62_07465 PF03989 DNA gyrase C-terminal domain, beta-propeller CDG62_07485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDG62_07495 PF00266 Aminotransferase class-V CDG62_07500 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CDG62_07515 PF00557 Metallopeptidase family M24 CDG62_07520 PF00318 Ribosomal protein S2 CDG62_07525 PF00889 Elongation factor TS CDG62_07550 PF03330 Lytic transglycolase CDG62_07550 PF05036 Sporulation related domain CDG62_07555 PF13406 Transglycosylase SLT domain CDG62_07565 PF14489 QueF-like protein CDG62_07565 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CDG62_07570 PF01061 ABC-2 type transporter CDG62_07575 PF00005 ABC transporter CDG62_07585 PF03454 MoeA C-terminal region (domain IV) CDG62_07585 PF03453 MoeA N-terminal region (domain I and II) CDG62_07585 PF00994 Probable molybdopterin binding domain CDG62_07590 PF01967 MoaC family CDG62_07590 PF00994 Probable molybdopterin binding domain CDG62_07600 PF00384 Molybdopterin oxidoreductase CDG62_07605 PF02634 FdhD/NarQ family CDG62_07610 PF03459 TOBE domain CDG62_07610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_07620 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_07625 PF03459 TOBE domain CDG62_07625 PF00005 ABC transporter CDG62_07635 PF12833 Helix-turn-helix domain CDG62_07640 PF00596 Class II Aldolase and Adducin N-terminal domain CDG62_07645 PF00155 Aminotransferase class I and II CDG62_07650 PF00892 EamA-like transporter family CDG62_07655 PF00999 Sodium/hydrogen exchanger family CDG62_07655 PF02254 TrkA-N domain CDG62_07660 PF17158 Membrane-associated sensor, integral membrane domain CDG62_07660 PF00990 Diguanylate cyclase, GGDEF domain CDG62_07695 PF00464 Serine hydroxymethyltransferase CDG62_07700 PF14760 Rnk N-terminus CDG62_07700 PF01272 Transcription elongation factor, GreA/GreB, C-term CDG62_07710 PF05816 Toxic anion resistance protein (TelA) CDG62_07715 PF05816 Toxic anion resistance protein (TelA) CDG62_07725 PF13192 Thioredoxin domain CDG62_07725 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_07730 PF00037 4Fe-4S binding domain CDG62_07740 PF13411 MerR HTH family regulatory protein CDG62_07770 PF00970 Oxidoreductase FAD-binding domain CDG62_07770 PF00175 Oxidoreductase NAD-binding domain CDG62_07775 PF18389 TrmO C-terminal domain CDG62_07775 PF01980 tRNA-methyltransferase O CDG62_07805 PF00072 Response regulator receiver domain CDG62_07805 PF00486 Transcriptional regulatory protein, C terminal CDG62_07810 PF08521 Two-component sensor kinase N-terminal CDG62_07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_07810 PF00512 His Kinase A (phospho-acceptor) domain CDG62_07820 PF00293 NUDIX domain CDG62_07830 PF00905 Penicillin binding protein transpeptidase domain CDG62_07830 PF14814 Bifunctional transglycosylase second domain CDG62_07830 PF00912 Transglycosylase CDG62_07835 PF01513 ATP-NAD kinase CDG62_07840 PF07023 Protein of unknown function (DUF1315) CDG62_07850 PF00591 Glycosyl transferase family, a/b domain CDG62_07850 PF02885 Glycosyl transferase family, helical bundle domain CDG62_07855 PF00375 Sodium:dicarboxylate symporter family CDG62_07860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG62_07860 PF02770 Acyl-CoA dehydrogenase, middle domain CDG62_07860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG62_07865 PF01965 DJ-1/PfpI family CDG62_07870 PF00800 Prephenate dehydratase CDG62_07870 PF01817 Chorismate mutase type II CDG62_07870 PF01842 ACT domain CDG62_07875 PF00155 Aminotransferase class I and II CDG62_07880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDG62_07900 PF03883 Peroxide stress protein YaaA CDG62_07910 PF03441 FAD binding domain of DNA photolyase CDG62_07910 PF00875 DNA photolyase CDG62_07920 PF00860 Permease family CDG62_07925 PF00962 Adenosine/AMP deaminase CDG62_07935 PF01292 Prokaryotic cytochrome b561 CDG62_07950 PF01351 Ribonuclease HII CDG62_07955 PF02599 Global regulator protein family CDG62_07960 PF01842 ACT domain CDG62_07960 PF00696 Amino acid kinase family CDG62_07960 PF13840 ACT domain CDG62_07965 PF01411 tRNA synthetases class II (A) CDG62_07965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDG62_07965 PF02272 DHHA1 domain CDG62_07970 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDG62_07970 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDG62_07985 PF03591 AzlC protein CDG62_07990 PF01037 Lrp/AsnC ligand binding domain CDG62_07990 PF13404 AsnC-type helix-turn-helix domain CDG62_07995 PF01037 Lrp/AsnC ligand binding domain CDG62_08000 PF00857 Isochorismatase family CDG62_08010 PF13393 Histidyl-tRNA synthetase CDG62_08015 PF00709 Adenylosuccinate synthetase CDG62_08030 PF00248 Aldo/keto reductase family CDG62_08035 PF00027 Cyclic nucleotide-binding domain CDG62_08035 PF13545 Crp-like helix-turn-helix domain CDG62_08040 PF02566 OsmC-like protein CDG62_08045 PF10431 C-terminal, D2-small domain, of ClpB protein CDG62_08045 PF17871 AAA lid domain CDG62_08045 PF00004 ATPase family associated with various cellular activities (AAA) CDG62_08045 PF07724 AAA domain (Cdc48 subfamily) CDG62_08045 PF02861 Clp amino terminal domain, pathogenicity island component CDG62_08055 PF10672 S-adenosylmethionine-dependent methyltransferase CDG62_08055 PF02926 THUMP domain CDG62_08055 PF01170 Putative RNA methylase family UPF0020 CDG62_08065 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDG62_08065 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDG62_08070 PF01979 Amidohydrolase family CDG62_08085 PF02667 Short chain fatty acid transporter CDG62_08090 PF01144 Coenzyme A transferase CDG62_08095 PF01144 Coenzyme A transferase CDG62_08100 PF00682 HMGL-like CDG62_08105 PF02785 Biotin carboxylase C-terminal domain CDG62_08105 PF00289 Biotin carboxylase, N-terminal domain CDG62_08105 PF00364 Biotin-requiring enzyme CDG62_08105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDG62_08110 PF00378 Enoyl-CoA hydratase/isomerase CDG62_08115 PF01039 Carboxyl transferase domain CDG62_08120 PF02770 Acyl-CoA dehydrogenase, middle domain CDG62_08120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG62_08120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG62_08125 PF17925 Tetracyclin repressor-like, C-terminal domain CDG62_08125 PF00440 Bacterial regulatory proteins, tetR family CDG62_08130 PF13193 AMP-binding enzyme C-terminal domain CDG62_08130 PF00501 AMP-binding enzyme CDG62_08135 PF06968 Biotin and Thiamin Synthesis associated domain CDG62_08135 PF04055 Radical SAM superfamily CDG62_08160 PF02390 Putative methyltransferase CDG62_08170 PF00916 Sulfate permease family CDG62_08170 PF01740 STAS domain CDG62_08175 PF02798 Glutathione S-transferase, N-terminal domain CDG62_08175 PF00043 Glutathione S-transferase, C-terminal domain CDG62_08180 PF02525 Flavodoxin-like fold CDG62_08195 PF05690 Thiazole biosynthesis protein ThiG CDG62_08205 PF04241 Protein of unknown function (DUF423) CDG62_08210 PF00140 Sigma-70 factor, region 1.2 CDG62_08210 PF04542 Sigma-70 region 2 CDG62_08210 PF04545 Sigma-70, region 4 CDG62_08220 PF00313 'Cold-shock' DNA-binding domain CDG62_08225 PF00270 DEAD/DEAH box helicase CDG62_08225 PF00271 Helicase conserved C-terminal domain CDG62_08235 PF00881 Nitroreductase family CDG62_08240 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CDG62_08240 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CDG62_08260 PF01180 Dihydroorotate dehydrogenase CDG62_08270 PF00156 Phosphoribosyl transferase domain CDG62_08285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDG62_08285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDG62_08290 PF01435 Peptidase family M48 CDG62_08295 PF09424 Yqey-like protein CDG62_08300 PF01165 Ribosomal protein S21 CDG62_08305 PF00814 Glycoprotease family CDG62_08310 PF00857 Isochorismatase family CDG62_08325 PF00069 Protein kinase domain CDG62_08325 PF03793 PASTA domain CDG62_08365 PF16123 Hydroxyacylglutathione hydrolase C-terminus CDG62_08365 PF00753 Metallo-beta-lactamase superfamily CDG62_08370 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDG62_08370 PF00578 AhpC/TSA family CDG62_08375 PF00271 Helicase conserved C-terminal domain CDG62_08375 PF04408 Helicase associated domain (HA2) CDG62_08375 PF11898 Domain of unknown function (DUF3418) CDG62_08375 PF00270 DEAD/DEAH box helicase CDG62_08375 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CDG62_08380 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDG62_08380 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CDG62_08395 PF00005 ABC transporter CDG62_08405 PF07690 Major Facilitator Superfamily CDG62_08410 PF04324 BFD-like [2Fe-2S] binding domain CDG62_08410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDG62_08410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_08410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDG62_08410 PF18267 Rubredoxin NAD+ reductase C-terminal domain CDG62_08415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDG62_08415 PF04324 BFD-like [2Fe-2S] binding domain CDG62_08415 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_08415 PF18267 Rubredoxin NAD+ reductase C-terminal domain CDG62_08415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDG62_08420 PF01568 Molydopterin dinucleotide binding domain CDG62_08420 PF00384 Molybdopterin oxidoreductase CDG62_08420 PF04324 BFD-like [2Fe-2S] binding domain CDG62_08420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDG62_08425 PF12804 MobA-like NTP transferase domain CDG62_08430 PF04055 Radical SAM superfamily CDG62_08430 PF06463 Molybdenum Cofactor Synthesis C CDG62_08440 PF02391 MoaE protein CDG62_08445 PF09190 DALR domain CDG62_08445 PF01406 tRNA synthetases class I (C) catalytic domain CDG62_08460 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CDG62_08465 PF02277 Phosphoribosyltransferase CDG62_08470 PF00300 Histidine phosphatase superfamily (branch 1) CDG62_08475 PF02654 Cobalamin-5-phosphate synthase CDG62_08480 PF01380 SIS domain CDG62_08480 PF00571 CBS domain CDG62_08495 PF03968 OstA-like protein CDG62_08500 PF00005 ABC transporter CDG62_08500 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDG62_08505 PF01205 Uncharacterized protein family UPF0029 CDG62_08510 PF12804 MobA-like NTP transferase domain CDG62_08510 PF14602 Hexapeptide repeat of succinyl-transferase CDG62_08510 PF00132 Bacterial transferase hexapeptide (six repeats) CDG62_08520 PF01596 O-methyltransferase CDG62_08530 PF11953 Domain of unknown function (DUF3470) CDG62_08530 PF00037 4Fe-4S binding domain CDG62_08535 PF01624 MutS domain I CDG62_08535 PF05188 MutS domain II CDG62_08535 PF00488 MutS domain V CDG62_08535 PF05192 MutS domain III CDG62_08535 PF05190 MutS family domain IV CDG62_08550 PF00132 Bacterial transferase hexapeptide (six repeats) CDG62_08555 PF00588 SpoU rRNA Methylase family CDG62_08560 PF01336 OB-fold nucleic acid binding domain CDG62_08560 PF02811 PHP domain CDG62_08560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDG62_08560 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDG62_08560 PF14579 Helix-hairpin-helix motif CDG62_08570 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_08575 PF09383 NIL domain CDG62_08575 PF00005 ABC transporter CDG62_08580 PF03180 NLPA lipoprotein CDG62_08585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDG62_08585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDG62_08590 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CDG62_08590 PF12833 Helix-turn-helix domain CDG62_08595 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDG62_08595 PF02843 Phosphoribosylglycinamide synthetase, C domain CDG62_08595 PF02844 Phosphoribosylglycinamide synthetase, N domain CDG62_08600 PF01808 AICARFT/IMPCHase bienzyme CDG62_08600 PF02142 MGS-like domain CDG62_08605 PF02954 Bacterial regulatory protein, Fis family CDG62_08635 PF13932 GidA associated domain CDG62_08635 PF01134 Glucose inhibited division protein A CDG62_08645 PF14403 Circularly permuted ATP-grasp type 2 CDG62_08655 PF08379 Bacterial transglutaminase-like N-terminal region CDG62_08655 PF01841 Transglutaminase-like superfamily CDG62_08670 PF00842 Alanine racemase, C-terminal domain CDG62_08670 PF01168 Alanine racemase, N-terminal domain CDG62_08675 PF00772 DnaB-like helicase N terminal domain CDG62_08675 PF03796 DnaB-like helicase C terminal domain CDG62_08680 PF01281 Ribosomal protein L9, N-terminal domain CDG62_08680 PF03948 Ribosomal protein L9, C-terminal domain CDG62_08685 PF01084 Ribosomal protein S18 CDG62_08690 PF01250 Ribosomal protein S6 CDG62_08705 PF01040 UbiA prenyltransferase family CDG62_08710 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CDG62_08715 PF00510 Cytochrome c oxidase subunit III CDG62_08720 PF00115 Cytochrome C and Quinol oxidase polypeptide I CDG62_08725 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CDG62_08725 PF06481 COX Aromatic Rich Motif CDG62_08735 PF02896 PEP-utilising enzyme, TIM barrel domain CDG62_08735 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CDG62_08735 PF00391 PEP-utilising enzyme, mobile domain CDG62_08740 PF03618 Kinase/pyrophosphorylase CDG62_08755 PF00296 Luciferase-like monooxygenase CDG62_08770 PF03462 PCRF domain CDG62_08770 PF00472 RF-1 domain CDG62_08775 PF13847 Methyltransferase domain CDG62_08775 PF17827 PrmC N-terminal domain CDG62_08780 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_08785 PF09084 NMT1/THI5 like CDG62_08805 PF12833 Helix-turn-helix domain CDG62_08805 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CDG62_08810 PF00106 short chain dehydrogenase CDG62_08815 PF02770 Acyl-CoA dehydrogenase, middle domain CDG62_08815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG62_08815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG62_08820 PF13193 AMP-binding enzyme C-terminal domain CDG62_08820 PF00501 AMP-binding enzyme CDG62_08825 PF00899 ThiF family CDG62_08830 PF03109 ABC1 family CDG62_08835 PF02152 Dihydroneopterin aldolase CDG62_08850 PF03232 Ubiquinone biosynthesis protein COQ7 CDG62_08855 PF07690 Major Facilitator Superfamily CDG62_08860 PF01103 Surface antigen CDG62_08860 PF17243 POTRA domain TamA domain 1 CDG62_08860 PF07244 Surface antigen variable number repeat CDG62_08890 PF00330 Aconitase family (aconitate hydratase) CDG62_08890 PF11791 Aconitate B N-terminal domain CDG62_08890 PF06434 Aconitate hydratase 2 N-terminus CDG62_08905 PF07715 TonB-dependent Receptor Plug Domain CDG62_08905 PF00593 TonB dependent receptor CDG62_08910 PF03616 Sodium/glutamate symporter CDG62_08915 PF01037 Lrp/AsnC ligand binding domain CDG62_08920 PF00324 Amino acid permease CDG62_08945 PF05525 Branched-chain amino acid transport protein CDG62_08950 PF00557 Metallopeptidase family M24 CDG62_08955 PF00872 Transposase, Mutator family CDG62_08960 PF03466 LysR substrate binding domain CDG62_08960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_08965 PF04607 Region found in RelA / SpoT proteins CDG62_08965 PF13291 ACT domain CDG62_08965 PF02824 TGS domain CDG62_08975 PF00158 Sigma-54 interaction domain CDG62_08975 PF00072 Response regulator receiver domain CDG62_08975 PF02954 Bacterial regulatory protein, Fis family CDG62_08980 PF00989 PAS fold CDG62_08980 PF00512 His Kinase A (phospho-acceptor) domain CDG62_08980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_08985 PF18693 TRAM domain CDG62_08985 PF04055 Radical SAM superfamily CDG62_08985 PF00919 Uncharacterized protein family UPF0004 CDG62_08990 PF00696 Amino acid kinase family CDG62_08995 PF01765 Ribosome recycling factor CDG62_09000 PF01255 Putative undecaprenyl diphosphate synthase CDG62_09010 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CDG62_09010 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CDG62_09010 PF13288 DXP reductoisomerase C-terminal domain CDG62_09015 PF17820 PDZ domain CDG62_09015 PF02163 Peptidase family M50 CDG62_09015 PF13180 PDZ domain CDG62_09020 PF07244 Surface antigen variable number repeat CDG62_09020 PF01103 Surface antigen CDG62_09030 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CDG62_09030 PF00132 Bacterial transferase hexapeptide (six repeats) CDG62_09035 PF07977 FabA-like domain CDG62_09040 PF00132 Bacterial transferase hexapeptide (six repeats) CDG62_09040 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CDG62_09055 PF02631 RecX family CDG62_09060 PF00154 recA bacterial DNA recombination protein CDG62_09065 PF01479 S4 domain CDG62_09070 PF13419 Haloacid dehalogenase-like hydrolase CDG62_09085 PF00459 Inositol monophosphatase family CDG62_09100 PF00041 Fibronectin type III domain CDG62_09100 PF12561 ToxR activated gene A lipoprotein domain CDG62_09105 PF01649 Ribosomal protein S20 CDG62_09110 PF13460 NAD(P)H-binding CDG62_09115 PF03737 Aldolase/RraA CDG62_09125 PF12697 Alpha/beta hydrolase family CDG62_09135 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_09135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDG62_09150 PF07690 Major Facilitator Superfamily CDG62_09155 PF00248 Aldo/keto reductase family CDG62_09160 PF03466 LysR substrate binding domain CDG62_09160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_09170 PF06418 CTP synthase N-terminus CDG62_09170 PF00117 Glutamine amidotransferase class-I CDG62_09175 PF00793 DAHP synthetase I family CDG62_09180 PF00113 Enolase, C-terminal TIM barrel domain CDG62_09180 PF03952 Enolase, N-terminal domain CDG62_09185 PF04977 Septum formation initiator CDG62_09190 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CDG62_09195 PF01098 Cell cycle protein CDG62_09210 PF06039 Malate:quinone oxidoreductase (Mqo) CDG62_09215 PF00732 GMC oxidoreductase CDG62_09215 PF05199 GMC oxidoreductase CDG62_09220 PF00171 Aldehyde dehydrogenase family CDG62_09225 PF00440 Bacterial regulatory proteins, tetR family CDG62_09225 PF13977 BetI-type transcriptional repressor, C-terminal CDG62_09230 PF02028 BCCT, betaine/carnitine/choline family transporter CDG62_09245 PF08173 Membrane bound YbgT-like protein CDG62_09250 PF02322 Cytochrome bd terminal oxidase subunit II CDG62_09255 PF01654 Cytochrome bd terminal oxidase subunit I CDG62_09265 PF07290 Protein of unknown function (DUF1449) CDG62_09275 PF00294 pfkB family carbohydrate kinase CDG62_09285 PF05193 Peptidase M16 inactive domain CDG62_09285 PF08367 Peptidase M16C associated CDG62_09285 PF00675 Insulinase (Peptidase family M16) CDG62_09290 PF02253 Phospholipase A1 CDG62_09295 PF02386 Cation transport protein CDG62_09300 PF02080 TrkA-C domain CDG62_09300 PF02254 TrkA-N domain CDG62_09310 PF00291 Pyridoxal-phosphate dependent enzyme CDG62_09310 PF00585 C-terminal regulatory domain of Threonine dehydratase CDG62_09315 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CDG62_09325 PF17151 Periplasmic sensor domain CDG62_09325 PF00990 Diguanylate cyclase, GGDEF domain CDG62_09330 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDG62_09330 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDG62_09340 PF02617 ATP-dependent Clp protease adaptor protein ClpS CDG62_09345 PF00004 ATPase family associated with various cellular activities (AAA) CDG62_09345 PF07724 AAA domain (Cdc48 subfamily) CDG62_09345 PF02861 Clp amino terminal domain, pathogenicity island component CDG62_09345 PF10431 C-terminal, D2-small domain, of ClpB protein CDG62_09345 PF17871 AAA lid domain CDG62_09350 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CDG62_09360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDG62_09360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDG62_09365 PF00440 Bacterial regulatory proteins, tetR family CDG62_09375 PF00285 Citrate synthase, C-terminal domain CDG62_09385 PF00756 Putative esterase CDG62_09390 PF13193 AMP-binding enzyme C-terminal domain CDG62_09390 PF00501 AMP-binding enzyme CDG62_09405 PF04055 Radical SAM superfamily CDG62_09405 PF06968 Biotin and Thiamin Synthesis associated domain CDG62_09410 PF08331 Domain of unknown function (DUF1730) CDG62_09415 PF03853 YjeF-related protein N-terminus CDG62_09415 PF01256 Carbohydrate kinase CDG62_09420 PF00708 Acylphosphatase CDG62_09425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDG62_09430 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_09435 PF00768 D-alanyl-D-alanine carboxypeptidase CDG62_09435 PF07943 Penicillin-binding protein 5, C-terminal domain CDG62_09445 PF00576 HIUase/Transthyretin family CDG62_09450 PF03971 Monomeric isocitrate dehydrogenase CDG62_09460 PF00849 RNA pseudouridylate synthase CDG62_09755 PF07885 Ion channel CDG62_09755 PF02254 TrkA-N domain CDG62_09760 PF13936 Helix-turn-helix domain CDG62_09760 PF00665 Integrase core domain CDG62_09775 PF11799 impB/mucB/samB family C-terminal domain CDG62_09775 PF00817 impB/mucB/samB family CDG62_09775 PF13438 Domain of unknown function (DUF4113) CDG62_09780 PF00717 Peptidase S24-like CDG62_09780 PF01726 LexA DNA binding domain CDG62_09805 PF13356 Arm DNA-binding domain CDG62_09805 PF00589 Phage integrase family CDG62_09810 PF00180 Isocitrate/isopropylmalate dehydrogenase CDG62_09835 PF01613 Flavin reductase like domain CDG62_09845 PF02567 Phenazine biosynthesis-like protein CDG62_09850 PF00675 Insulinase (Peptidase family M16) CDG62_09850 PF05193 Peptidase M16 inactive domain CDG62_09885 PF02581 Thiamine monophosphate synthase CDG62_09890 PF00202 Aminotransferase class-III CDG62_09900 PF13737 Transposase DDE domain CDG62_09910 PF01361 Tautomerase enzyme CDG62_09915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_09915 PF03466 LysR substrate binding domain CDG62_09925 PF02075 Crossover junction endodeoxyribonuclease RuvC CDG62_09935 PF01810 LysE type translocator CDG62_09950 PF02773 S-adenosylmethionine synthetase, C-terminal domain CDG62_09950 PF02772 S-adenosylmethionine synthetase, central domain CDG62_09950 PF00438 S-adenosylmethionine synthetase, N-terminal domain CDG62_09955 PF00456 Transketolase, thiamine diphosphate binding domain CDG62_09955 PF02779 Transketolase, pyrimidine binding domain CDG62_09955 PF02780 Transketolase, C-terminal domain CDG62_09965 PF00583 Acetyltransferase (GNAT) family CDG62_09975 PF00117 Glutamine amidotransferase class-I CDG62_09975 PF00958 GMP synthase C terminal domain CDG62_09975 PF02540 NAD synthase CDG62_09985 PF00106 short chain dehydrogenase CDG62_09990 PF01323 DSBA-like thioredoxin domain CDG62_09995 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CDG62_10000 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CDG62_10005 PF13520 Amino acid permease CDG62_10010 PF00171 Aldehyde dehydrogenase family CDG62_10025 PF00465 Iron-containing alcohol dehydrogenase CDG62_10035 PF14493 Helix-turn-helix domain CDG62_10035 PF05970 PIF1-like helicase CDG62_10040 PF00027 Cyclic nucleotide-binding domain CDG62_10040 PF00520 Ion transport protein CDG62_10045 PF07690 Major Facilitator Superfamily CDG62_10050 PF04284 Protein of unknown function (DUF441) CDG62_10055 PF01479 S4 domain CDG62_10055 PF00849 RNA pseudouridylate synthase CDG62_10070 PF01479 S4 domain CDG62_10070 PF00849 RNA pseudouridylate synthase CDG62_10075 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CDG62_10080 PF01119 DNA mismatch repair protein, C-terminal domain CDG62_10080 PF08676 MutL C terminal dimerisation domain CDG62_10090 PF17209 Hfq protein CDG62_10095 PF09312 SurA N-terminal domain CDG62_10095 PF00639 PPIC-type PPIASE domain CDG62_10100 PF03968 OstA-like protein CDG62_10100 PF04453 LPS transport system D CDG62_10105 PF01636 Phosphotransferase enzyme family CDG62_10110 PF00483 Nucleotidyl transferase CDG62_10115 PF02527 rRNA small subunit methyltransferase G CDG62_10120 PF13614 AAA domain CDG62_10125 PF02195 ParB-like nuclease domain CDG62_10125 PF17762 HTH domain found in ParB protein CDG62_10130 PF01618 MotA/TolQ/ExbB proton channel family CDG62_10140 PF00664 ABC transporter transmembrane region CDG62_10140 PF00005 ABC transporter CDG62_10145 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CDG62_10150 PF02348 Cytidylyltransferase CDG62_10155 PF09115 DNA polymerase III, delta subunit, C terminal CDG62_10165 PF01026 TatD related DNase CDG62_10180 PF07963 Prokaryotic N-terminal methylation motif CDG62_10180 PF02501 Type II secretion system (T2SS), protein I CDG62_10185 PF07963 Prokaryotic N-terminal methylation motif CDG62_10185 PF11612 Type II secretion system (T2SS), protein J CDG62_10190 PF03934 Type II secretion system (T2SS), protein K CDG62_10200 PF03167 Uracil DNA glycosylase superfamily CDG62_10210 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDG62_10220 PF02224 Cytidylate kinase CDG62_10225 PF00575 S1 RNA binding domain CDG62_10230 PF00216 Bacterial DNA-binding protein CDG62_10240 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CDG62_10250 PF03956 Lysine exporter LysO CDG62_10255 PF00743 Flavin-binding monooxygenase-like CDG62_10265 PF03969 AFG1-like ATPase CDG62_10270 PF01274 Malate synthase CDG62_10290 PF03741 Integral membrane protein TerC family CDG62_10290 PF03471 Transporter associated domain CDG62_10300 PF02110 Hydroxyethylthiazole kinase family CDG62_10315 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CDG62_10315 PF11940 Domain of unknown function (DUF3458) Ig-like fold CDG62_10315 PF01433 Peptidase family M1 domain CDG62_10325 PF00582 Universal stress protein family CDG62_10335 PF00135 Carboxylesterase family CDG62_10340 PF00893 Small Multidrug Resistance protein CDG62_10345 PF00440 Bacterial regulatory proteins, tetR family CDG62_10350 PF03594 Benzoate membrane transport protein CDG62_10355 PF01810 LysE type translocator CDG62_10360 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDG62_10365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_10365 PF03466 LysR substrate binding domain CDG62_10380 PF00108 Thiolase, N-terminal domain CDG62_10380 PF02803 Thiolase, C-terminal domain CDG62_10405 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CDG62_10405 PF12170 DNA polymerase III tau subunit V interacting with alpha CDG62_10405 PF12169 DNA polymerase III subunits gamma and tau domain III CDG62_10410 PF03061 Thioesterase superfamily CDG62_10415 PF00465 Iron-containing alcohol dehydrogenase CDG62_10420 PF01451 Low molecular weight phosphotyrosine protein phosphatase CDG62_10425 PF01565 FAD binding domain CDG62_10425 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CDG62_10440 PF01645 Conserved region in glutamate synthase CDG62_10445 PF00072 Response regulator receiver domain CDG62_10445 PF00196 Bacterial regulatory proteins, luxR family CDG62_10450 PF07730 Histidine kinase CDG62_10455 PF08007 Cupin superfamily protein CDG62_10460 PF02545 Maf-like protein CDG62_10470 PF00162 Phosphoglycerate kinase CDG62_10480 PF01116 Fructose-bisphosphate aldolase class-II CDG62_10495 PF00881 Nitroreductase family CDG62_10510 PF00149 Calcineurin-like phosphoesterase CDG62_10515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDG62_10520 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDG62_10520 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CDG62_10525 PF01062 Bestrophin, RFP-TM, chloride channel CDG62_10540 PF00872 Transposase, Mutator family CDG62_10560 PF05958 tRNA (Uracil-5-)-methyltransferase CDG62_10565 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CDG62_10565 PF14850 DNA-binding domain of Proline dehydrogenase CDG62_10565 PF00171 Aldehyde dehydrogenase family CDG62_10565 PF01619 Proline dehydrogenase CDG62_10570 PF01037 Lrp/AsnC ligand binding domain CDG62_10575 PF00474 Sodium:solute symporter family CDG62_10585 PF00270 DEAD/DEAH box helicase CDG62_10585 PF03461 TRCF domain CDG62_10585 PF00271 Helicase conserved C-terminal domain CDG62_10585 PF17757 UvrB interaction domain CDG62_10585 PF02559 CarD-like/TRCF domain CDG62_10595 PF00211 Adenylate and Guanylate cyclase catalytic domain CDG62_10600 PF00111 2Fe-2S iron-sulfur cluster binding domain CDG62_10605 PF00012 Hsp70 protein CDG62_10610 PF07743 HSCB C-terminal oligomerisation domain CDG62_10610 PF00226 DnaJ domain CDG62_10615 PF01521 Iron-sulphur cluster biosynthesis CDG62_10620 PF01592 NifU-like N terminal domain CDG62_10625 PF00266 Aminotransferase class-V CDG62_10630 PF02082 Transcriptional regulator CDG62_10645 PF00216 Bacterial DNA-binding protein CDG62_10670 PF00267 Gram-negative porin CDG62_10675 PF01230 HIT domain CDG62_10700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CDG62_10700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CDG62_10710 PF01053 Cys/Met metabolism PLP-dependent enzyme CDG62_10715 PF02575 YbaB/EbfC DNA-binding family CDG62_10720 PF02132 RecR protein CDG62_10720 PF13662 Toprim domain CDG62_10725 PF01612 3'-5' exonuclease CDG62_10725 PF00570 HRDC domain CDG62_10730 PF05166 YcgL domain CDG62_10740 PF01434 Peptidase family M41 CDG62_10740 PF00004 ATPase family associated with various cellular activities (AAA) CDG62_10740 PF17862 AAA+ lid domain CDG62_10750 PF00291 Pyridoxal-phosphate dependent enzyme CDG62_10755 PF00571 CBS domain CDG62_10785 PF00675 Insulinase (Peptidase family M16) CDG62_10785 PF05193 Peptidase M16 inactive domain CDG62_10790 PF00448 SRP54-type protein, GTPase domain CDG62_10790 PF02881 SRP54-type protein, helical bundle domain CDG62_10840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG62_10840 PF02770 Acyl-CoA dehydrogenase, middle domain CDG62_10840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG62_10845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG62_10845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG62_10845 PF02770 Acyl-CoA dehydrogenase, middle domain CDG62_10850 PF03109 ABC1 family CDG62_10865 PF05175 Methyltransferase small domain CDG62_10870 PF01264 Chorismate synthase CDG62_10885 PF01266 FAD dependent oxidoreductase CDG62_10895 PF00990 Diguanylate cyclase, GGDEF domain CDG62_10900 PF01425 Amidase CDG62_10905 PF12832 MFS_1 like family CDG62_10920 PF15887 Putative zinc-binding metallo-peptidase CDG62_10920 PF10005 zinc-ribbon domain CDG62_10930 PF08753 NikR C terminal nickel binding domain CDG62_10930 PF01402 Ribbon-helix-helix protein, copG family CDG62_10940 PF00893 Small Multidrug Resistance protein CDG62_10955 PF00005 ABC transporter CDG62_10985 PF04143 Sulphur transport CDG62_10995 PF00753 Metallo-beta-lactamase superfamily CDG62_10995 PF04273 Putative phosphatase (DUF442) CDG62_11000 PF12697 Alpha/beta hydrolase family CDG62_11015 PF17874 MalT-like TPR region CDG62_11015 PF00196 Bacterial regulatory proteins, luxR family CDG62_11035 PF08386 TAP-like protein CDG62_11035 PF00561 alpha/beta hydrolase fold CDG62_11045 PF00884 Sulfatase CDG62_11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_11065 PF03466 LysR substrate binding domain CDG62_11085 PF17763 Glutaminase/Asparaginase C-terminal domain CDG62_11085 PF00710 Asparaginase, N-terminal CDG62_11090 PF00106 short chain dehydrogenase CDG62_11095 PF07715 TonB-dependent Receptor Plug Domain CDG62_11095 PF00593 TonB dependent receptor CDG62_11100 PF07715 TonB-dependent Receptor Plug Domain CDG62_11100 PF00593 TonB dependent receptor CDG62_11110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_11110 PF03466 LysR substrate binding domain CDG62_11115 PF13411 MerR HTH family regulatory protein CDG62_11120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDG62_11125 PF03435 Saccharopine dehydrogenase NADP binding domain CDG62_11135 PF00873 AcrB/AcrD/AcrF family CDG62_11140 PF00529 HlyD membrane-fusion protein of T1SS CDG62_11140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDG62_11155 PF01545 Cation efflux family CDG62_11160 PF00106 short chain dehydrogenase CDG62_11175 PF07690 Major Facilitator Superfamily CDG62_11180 PF03466 LysR substrate binding domain CDG62_11180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_11185 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CDG62_11185 PF13378 Enolase C-terminal domain-like CDG62_11190 PF02426 Muconolactone delta-isomerase CDG62_11195 PF00775 Dioxygenase CDG62_11195 PF04444 Catechol dioxygenase N terminus CDG62_11200 PF00355 Rieske [2Fe-2S] domain CDG62_11200 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CDG62_11205 PF00866 Ring hydroxylating beta subunit CDG62_11210 PF00970 Oxidoreductase FAD-binding domain CDG62_11210 PF00111 2Fe-2S iron-sulfur cluster binding domain CDG62_11210 PF00175 Oxidoreductase NAD-binding domain CDG62_11215 PF00106 short chain dehydrogenase CDG62_11220 PF03594 Benzoate membrane transport protein CDG62_11225 PF01144 Coenzyme A transferase CDG62_11230 PF01144 Coenzyme A transferase CDG62_11235 PF00108 Thiolase, N-terminal domain CDG62_11235 PF02803 Thiolase, C-terminal domain CDG62_11240 PF12146 Serine aminopeptidase, S33 CDG62_11245 PF01220 Dehydroquinase class II CDG62_11250 PF00364 Biotin-requiring enzyme CDG62_11255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDG62_11255 PF00289 Biotin carboxylase, N-terminal domain CDG62_11255 PF02785 Biotin carboxylase C-terminal domain CDG62_11270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDG62_11270 PF00289 Biotin carboxylase, N-terminal domain CDG62_11270 PF02785 Biotin carboxylase C-terminal domain CDG62_11285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_11285 PF03466 LysR substrate binding domain CDG62_11290 PF00108 Thiolase, N-terminal domain CDG62_11290 PF02803 Thiolase, C-terminal domain CDG62_11295 PF08360 QacR-like protein, C-terminal region CDG62_11295 PF00440 Bacterial regulatory proteins, tetR family CDG62_11300 PF00291 Pyridoxal-phosphate dependent enzyme CDG62_11305 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CDG62_11305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CDG62_11310 PF00860 Permease family CDG62_11315 PF01613 Flavin reductase like domain CDG62_11320 PF01042 Endoribonuclease L-PSP CDG62_11325 PF00857 Isochorismatase family CDG62_11330 PF00296 Luciferase-like monooxygenase CDG62_11335 PF12697 Alpha/beta hydrolase family CDG62_11345 PF00916 Sulfate permease family CDG62_11345 PF01740 STAS domain CDG62_11350 PF00375 Sodium:dicarboxylate symporter family CDG62_11360 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CDG62_11365 PF00924 Mechanosensitive ion channel CDG62_11375 PF00005 ABC transporter CDG62_11375 PF00664 ABC transporter transmembrane region CDG62_11380 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CDG62_11380 PF12833 Helix-turn-helix domain CDG62_11385 PF01597 Glycine cleavage H-protein CDG62_11390 PF07690 Major Facilitator Superfamily CDG62_11395 PF00437 Type II/IV secretion system protein CDG62_11400 PF00793 DAHP synthetase I family CDG62_11405 PF00563 EAL domain CDG62_11405 PF03707 Bacterial signalling protein N terminal repeat CDG62_11405 PF00990 Diguanylate cyclase, GGDEF domain CDG62_11410 PF00487 Fatty acid desaturase CDG62_11420 PF00107 Zinc-binding dehydrogenase CDG62_11420 PF08240 Alcohol dehydrogenase GroES-like domain CDG62_11425 PF13091 PLD-like domain CDG62_11445 PF06865 Pyrimidine/purine nucleoside phosphorylase CDG62_11450 PF00106 short chain dehydrogenase CDG62_11470 PF03466 LysR substrate binding domain CDG62_11470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_11495 PF00206 Lyase CDG62_11495 PF10415 Fumarase C C-terminus CDG62_11500 PF16363 GDP-mannose 4,6 dehydratase CDG62_11505 PF01047 MarR family CDG62_11515 PF01292 Prokaryotic cytochrome b561 CDG62_11520 PF01695 IstB-like ATP binding protein CDG62_11525 PF00665 Integrase core domain CDG62_11540 PF01381 Helix-turn-helix CDG62_11560 PF13007 Transposase C of IS166 homeodomain CDG62_11560 PF03050 Transposase IS66 family CDG62_11560 PF13005 zinc-finger binding domain of transposase IS66 CDG62_11560 PF13817 IS66 C-terminal element CDG62_11580 PF00872 Transposase, Mutator family CDG62_11590 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CDG62_11640 PF02635 DsrE/DsrF-like family CDG62_11660 PF01638 HxlR-like helix-turn-helix CDG62_11665 PF13419 Haloacid dehalogenase-like hydrolase CDG62_11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_11670 PF03466 LysR substrate binding domain CDG62_11675 PF03788 LrgA family CDG62_11680 PF04172 LrgB-like family CDG62_11690 PF07715 TonB-dependent Receptor Plug Domain CDG62_11690 PF00593 TonB dependent receptor CDG62_11695 PF07690 Major Facilitator Superfamily CDG62_11710 PF04183 IucA / IucC family CDG62_11710 PF06276 Ferric iron reductase FhuF-like transporter CDG62_11715 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CDG62_11720 PF06276 Ferric iron reductase FhuF-like transporter CDG62_11720 PF04183 IucA / IucC family CDG62_11725 PF04073 Aminoacyl-tRNA editing domain CDG62_11730 PF00487 Fatty acid desaturase CDG62_11735 PF12833 Helix-turn-helix domain CDG62_11735 PF12852 Cupin CDG62_11740 PF18381 YcaO cyclodehydratase C-terminal domain CDG62_11740 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CDG62_11745 PF02684 Lipid-A-disaccharide synthetase CDG62_11795 PF01925 Sulfite exporter TauE/SafE CDG62_11800 PF00793 DAHP synthetase I family CDG62_11810 PF02542 YgbB family CDG62_11840 PF01553 Acyltransferase CDG62_11845 PF01709 Transcriptional regulator CDG62_11850 PF04229 GrpB protein CDG62_11865 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CDG62_11865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG62_11870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG62_11870 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CDG62_11875 PF00296 Luciferase-like monooxygenase CDG62_11880 PF03180 NLPA lipoprotein CDG62_11885 PF03180 NLPA lipoprotein CDG62_11890 PF09383 NIL domain CDG62_11890 PF00005 ABC transporter CDG62_11895 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_11900 PF06071 Protein of unknown function (DUF933) CDG62_11900 PF01926 50S ribosome-binding GTPase CDG62_11915 PF13545 Crp-like helix-turn-helix domain CDG62_11915 PF00027 Cyclic nucleotide-binding domain CDG62_11925 PF03591 AzlC protein CDG62_11930 PF05437 Branched-chain amino acid transport protein (AzlD) CDG62_11935 PF02222 ATP-grasp domain CDG62_11940 PF01909 Nucleotidyltransferase domain CDG62_11940 PF01966 HD domain CDG62_11940 PF08335 GlnD PII-uridylyltransferase CDG62_11945 PF00155 Aminotransferase class I and II CDG62_11950 PF00593 TonB dependent receptor CDG62_11950 PF07715 TonB-dependent Receptor Plug Domain CDG62_11965 PF00255 Glutathione peroxidase CDG62_11970 PF01641 SelR domain CDG62_11975 PF00155 Aminotransferase class I and II CDG62_11995 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_11995 PF13192 Thioredoxin domain CDG62_12020 PF03060 Nitronate monooxygenase CDG62_12025 PF01207 Dihydrouridine synthase (Dus) CDG62_12040 PF08240 Alcohol dehydrogenase GroES-like domain CDG62_12040 PF00107 Zinc-binding dehydrogenase CDG62_12090 PF07759 Protein of unknown function (DUF1615) CDG62_12105 PF00487 Fatty acid desaturase CDG62_12110 PF00970 Oxidoreductase FAD-binding domain CDG62_12110 PF00111 2Fe-2S iron-sulfur cluster binding domain CDG62_12110 PF00175 Oxidoreductase NAD-binding domain CDG62_12115 PF00440 Bacterial regulatory proteins, tetR family CDG62_12130 PF18337 RapA N-terminal Tudor like domain CDG62_12130 PF18339 RapA N-terminal Tudor like domain 1 CDG62_12130 PF00176 SNF2 family N-terminal domain CDG62_12130 PF12137 RNA polymerase recycling family C-terminal CDG62_12130 PF00271 Helicase conserved C-terminal domain CDG62_12135 PF00849 RNA pseudouridylate synthase CDG62_12150 PF00005 ABC transporter CDG62_12155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDG62_12165 PF01979 Amidohydrolase family CDG62_12170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_12170 PF03466 LysR substrate binding domain CDG62_12185 PF02321 Outer membrane efflux protein CDG62_12190 PF00873 AcrB/AcrD/AcrF family CDG62_12195 PF00873 AcrB/AcrD/AcrF family CDG62_12200 PF13533 Biotin-lipoyl like CDG62_12210 PF16220 Domain of unknown function (DUF4880) CDG62_12210 PF04773 FecR protein CDG62_12215 PF00593 TonB dependent receptor CDG62_12215 PF07715 TonB-dependent Receptor Plug Domain CDG62_12230 PF00155 Aminotransferase class I and II CDG62_12230 PF00392 Bacterial regulatory proteins, gntR family CDG62_12235 PF00892 EamA-like transporter family CDG62_12240 PF00529 HlyD membrane-fusion protein of T1SS CDG62_12245 PF00005 ABC transporter CDG62_12245 PF00664 ABC transporter transmembrane region CDG62_12245 PF03412 Peptidase C39 family CDG62_12250 PF02321 Outer membrane efflux protein CDG62_12255 PF13181 Tetratricopeptide repeat CDG62_12255 PF00535 Glycosyl transferase family 2 CDG62_12280 PF00266 Aminotransferase class-V CDG62_12300 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDG62_12310 PF00296 Luciferase-like monooxygenase CDG62_12320 PF00296 Luciferase-like monooxygenase CDG62_12325 PF00593 TonB dependent receptor CDG62_12325 PF07715 TonB-dependent Receptor Plug Domain CDG62_12330 PF00043 Glutathione S-transferase, C-terminal domain CDG62_12330 PF13417 Glutathione S-transferase, N-terminal domain CDG62_12335 PF03544 Gram-negative bacterial TonB protein C-terminal CDG62_12340 PF01618 MotA/TolQ/ExbB proton channel family CDG62_12345 PF02472 Biopolymer transport protein ExbD/TolR CDG62_12360 PF00809 Pterin binding enzyme CDG62_12365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDG62_12365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDG62_12365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDG62_12365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDG62_12380 PF13610 DDE domain CDG62_12390 PF01443 Viral (Superfamily 1) RNA helicase CDG62_12390 PF03389 MobA/MobL family CDG62_12390 PF17841 BID domain of Bartonella effector protein (Bep) CDG62_12400 PF00665 Integrase core domain CDG62_12400 PF13936 Helix-turn-helix domain CDG62_12420 PF00118 TCP-1/cpn60 chaperonin family CDG62_12425 PF00166 Chaperonin 10 Kd subunit CDG62_12430 PF03091 CutA1 divalent ion tolerance protein CDG62_12435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDG62_12440 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CDG62_12450 PF00753 Metallo-beta-lactamase superfamily CDG62_12455 PF13936 Helix-turn-helix domain CDG62_12455 PF00665 Integrase core domain CDG62_12475 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase CDG62_12480 PF01636 Phosphotransferase enzyme family CDG62_12490 PF03466 LysR substrate binding domain CDG62_12490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_12495 PF02272 DHHA1 domain CDG62_12495 PF01411 tRNA synthetases class II (A) CDG62_12495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDG62_12515 PF00717 Peptidase S24-like CDG62_12515 PF01726 LexA DNA binding domain CDG62_12520 PF13438 Domain of unknown function (DUF4113) CDG62_12520 PF00817 impB/mucB/samB family CDG62_12520 PF11799 impB/mucB/samB family C-terminal domain CDG62_12560 PF01841 Transglutaminase-like superfamily CDG62_12560 PF13559 Domain of unknown function (DUF4129) CDG62_12560 PF11992 Domain of unknown function (DUF3488) CDG62_12570 PF17863 AAA lid domain CDG62_12570 PF07726 ATPase family associated with various cellular activities (AAA) CDG62_12575 PF02558 Ketopantoate reductase PanE/ApbA CDG62_12575 PF08546 Ketopantoate reductase PanE/ApbA C terminal CDG62_12580 PF04328 Selenoprotein, putative CDG62_12585 PF02554 Carbon starvation protein CstA CDG62_12585 PF13722 5TM C-terminal transporter carbon starvation CstA CDG62_12590 PF08207 Elongation factor P (EF-P) KOW-like domain CDG62_12590 PF09285 Elongation factor P, C-terminal CDG62_12590 PF01132 Elongation factor P (EF-P) OB domain CDG62_12595 PF04055 Radical SAM superfamily CDG62_12610 PF01197 Ribosomal protein L31 CDG62_12620 PF13593 SBF-like CPA transporter family (DUF4137) CDG62_12625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDG62_12630 PF07690 Major Facilitator Superfamily CDG62_12635 PF13654 AAA domain CDG62_12635 PF05362 Lon protease (S16) C-terminal proteolytic domain CDG62_12640 PF00462 Glutaredoxin CDG62_12645 PF00202 Aminotransferase class-III CDG62_12650 PF01343 Peptidase family S49 CDG62_12650 PF08496 Peptidase family S49 N-terminal CDG62_12655 PF00005 ABC transporter CDG62_12660 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_12665 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_12670 PF12849 PBP superfamily domain CDG62_12680 PF00282 Pyridoxal-dependent decarboxylase conserved domain CDG62_12685 PF00202 Aminotransferase class-III CDG62_12695 PF00593 TonB dependent receptor CDG62_12695 PF07715 TonB-dependent Receptor Plug Domain CDG62_12695 PF07660 Secretin and TonB N terminus short domain CDG62_12700 PF01569 PAP2 superfamily CDG62_12715 PF00696 Amino acid kinase family CDG62_12715 PF01472 PUA domain CDG62_12720 PF01018 GTP1/OBG CDG62_12720 PF01926 50S ribosome-binding GTPase CDG62_12725 PF01638 HxlR-like helix-turn-helix CDG62_12730 PF05368 NmrA-like family CDG62_12745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDG62_12745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDG62_12750 PF00892 EamA-like transporter family CDG62_12760 PF12344 Ultra-violet resistance protein B CDG62_12760 PF04851 Type III restriction enzyme, res subunit CDG62_12760 PF00271 Helicase conserved C-terminal domain CDG62_12760 PF17757 UvrB interaction domain CDG62_12760 PF02151 UvrB/uvrC motif CDG62_12775 PF00990 Diguanylate cyclase, GGDEF domain CDG62_12775 PF03707 Bacterial signalling protein N terminal repeat CDG62_12775 PF00563 EAL domain CDG62_12790 PF01554 MatE CDG62_12795 PF00892 EamA-like transporter family CDG62_12820 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CDG62_12825 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CDG62_12830 PF02565 Recombination protein O C terminal CDG62_12830 PF11967 Recombination protein O N terminal CDG62_12840 PF01926 50S ribosome-binding GTPase CDG62_12840 PF07650 KH domain CDG62_12845 PF00035 Double-stranded RNA binding motif CDG62_12845 PF14622 Ribonuclease-III-like CDG62_12855 PF10502 Signal peptidase, peptidase S26 CDG62_12860 PF06421 GTP-binding protein LepA C-terminus CDG62_12860 PF03144 Elongation factor Tu domain 2 CDG62_12860 PF00679 Elongation factor G C-terminus CDG62_12860 PF00009 Elongation factor Tu GTP binding domain CDG62_12870 PF13180 PDZ domain CDG62_12875 PF02910 Fumarate reductase flavoprotein C-term CDG62_12875 PF00890 FAD binding domain CDG62_12885 PF02223 Thymidylate kinase CDG62_12890 PF02618 YceG-like family CDG62_12910 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_12915 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_12920 PF00005 ABC transporter CDG62_12920 PF12857 TOBE-like domain CDG62_12925 PF03466 LysR substrate binding domain CDG62_12925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_12940 PF14602 Hexapeptide repeat of succinyl-transferase CDG62_12940 PF00132 Bacterial transferase hexapeptide (six repeats) CDG62_12940 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CDG62_12945 PF04055 Radical SAM superfamily CDG62_12950 PF06508 Queuosine biosynthesis protein QueC CDG62_12965 PF00578 AhpC/TSA family CDG62_12970 PF01810 LysE type translocator CDG62_12975 PF03466 LysR substrate binding domain CDG62_12975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_12980 PF04264 YceI-like domain CDG62_12985 PF01467 Cytidylyltransferase-like CDG62_12985 PF00293 NUDIX domain CDG62_12990 PF00378 Enoyl-CoA hydratase/isomerase CDG62_12995 PF00881 Nitroreductase family CDG62_13005 PF01784 NIF3 (NGG1p interacting factor 3) CDG62_13015 PF02769 AIR synthase related protein, C-terminal domain CDG62_13015 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CDG62_13015 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CDG62_13020 PF01966 HD domain CDG62_13025 PF01330 RuvA N terminal domain CDG62_13025 PF07499 RuvA, C-terminal domain CDG62_13030 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDG62_13030 PF05491 RuvB C-terminal winged helix domain CDG62_13030 PF17864 RuvB AAA lid domain CDG62_13050 PF03061 Thioesterase superfamily CDG62_13055 PF01618 MotA/TolQ/ExbB proton channel family CDG62_13060 PF02472 Biopolymer transport protein ExbD/TolR CDG62_13070 PF07676 WD40-like Beta Propeller Repeat CDG62_13070 PF04052 TolB amino-terminal domain CDG62_13075 PF00691 OmpA family CDG62_13085 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CDG62_13090 PF00588 SpoU rRNA Methylase family CDG62_13090 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDG62_13125 PF11638 DnaA N-terminal domain CDG62_13125 PF00308 Bacterial dnaA protein CDG62_13125 PF08299 Bacterial dnaA protein helix-turn-helix CDG62_13130 PF01594 AI-2E family transporter CDG62_13135 PF02769 AIR synthase related protein, C-terminal domain CDG62_13135 PF00586 AIR synthase related protein, N-terminal domain CDG62_13140 PF00551 Formyl transferase CDG62_13150 PF06965 Na+/H+ antiporter 1 CDG62_13150 PF01343 Peptidase family S49 CDG62_13160 PF03772 Competence protein CDG62_13160 PF13567 Domain of unknown function (DUF4131) CDG62_13160 PF00753 Metallo-beta-lactamase superfamily CDG62_13165 PF00005 ABC transporter CDG62_13170 PF12704 MacB-like periplasmic core domain CDG62_13170 PF02687 FtsX-like permease family CDG62_13180 PF00892 EamA-like transporter family CDG62_13185 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CDG62_13195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDG62_13195 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_13200 PF04055 Radical SAM superfamily CDG62_13205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG62_13205 PF02770 Acyl-CoA dehydrogenase, middle domain CDG62_13205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG62_13205 PF09317 Domain of unknown function (DUF1974) CDG62_13245 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CDG62_13245 PF05221 S-adenosyl-L-homocysteine hydrolase CDG62_13250 PF02219 Methylenetetrahydrofolate reductase CDG62_13255 PF04452 RNA methyltransferase CDG62_13260 PF00498 FHA domain CDG62_13260 PF00563 EAL domain CDG62_13260 PF00990 Diguanylate cyclase, GGDEF domain CDG62_13265 PF00390 Malic enzyme, N-terminal domain CDG62_13265 PF03949 Malic enzyme, NAD binding domain CDG62_13265 PF01515 Phosphate acetyl/butaryl transferase CDG62_13270 PF01743 Poly A polymerase head domain CDG62_13270 PF12627 Probable RNA and SrmB- binding site of polymerase A CDG62_13275 PF00152 tRNA synthetases class II (D, K and N) CDG62_13280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDG62_13280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDG62_13280 PF11890 Domain of unknown function (DUF3410) CDG62_13290 PF00301 Rubredoxin CDG62_13295 PF00487 Fatty acid desaturase CDG62_13300 PF12833 Helix-turn-helix domain CDG62_13300 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CDG62_13340 PF00378 Enoyl-CoA hydratase/isomerase CDG62_13345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG62_13345 PF02770 Acyl-CoA dehydrogenase, middle domain CDG62_13345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG62_13350 PF00501 AMP-binding enzyme CDG62_13350 PF13193 AMP-binding enzyme C-terminal domain CDG62_13355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CDG62_13355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CDG62_13360 PF00171 Aldehyde dehydrogenase family CDG62_13365 PF03466 LysR substrate binding domain CDG62_13365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_13380 PF13737 Transposase DDE domain CDG62_13390 PF00872 Transposase, Mutator family CDG62_13405 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_13405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDG62_13410 PF01565 FAD binding domain CDG62_13410 PF09330 D-lactate dehydrogenase, membrane binding CDG62_13415 PF01070 FMN-dependent dehydrogenase CDG62_13420 PF00392 Bacterial regulatory proteins, gntR family CDG62_13420 PF07729 FCD domain CDG62_13425 PF02652 L-lactate permease CDG62_13430 PF00764 Arginosuccinate synthase CDG62_13435 PF00990 Diguanylate cyclase, GGDEF domain CDG62_13435 PF01590 GAF domain CDG62_13435 PF00563 EAL domain CDG62_13435 PF00360 Phytochrome region CDG62_13440 PF01979 Amidohydrolase family CDG62_13445 PF00929 Exonuclease CDG62_13455 PF00324 Amino acid permease CDG62_13465 PF00324 Amino acid permease CDG62_13505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDG62_13505 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_13510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDG62_13510 PF00005 ABC transporter CDG62_13515 PF12911 N-terminal TM domain of oligopeptide transport permease C CDG62_13515 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_13520 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_13525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDG62_13530 PF01464 Transglycosylase SLT domain CDG62_13530 PF01476 LysM domain CDG62_13535 PF00929 Exonuclease CDG62_13545 PF00293 NUDIX domain CDG62_13545 PF09297 NADH pyrophosphatase zinc ribbon domain CDG62_13550 PF07859 alpha/beta hydrolase fold CDG62_13555 PF04972 BON domain CDG62_13560 PF02021 Uncharacterised protein family UPF0102 CDG62_13565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDG62_13570 PF03466 LysR substrate binding domain CDG62_13570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_13575 PF01551 Peptidase family M23 CDG62_13575 PF01476 LysM domain CDG62_13580 PF01975 Survival protein SurE CDG62_13585 PF13356 Arm DNA-binding domain CDG62_13585 PF00589 Phage integrase family CDG62_13585 PF14659 Phage integrase, N-terminal SAM-like domain CDG62_13605 PF13737 Transposase DDE domain CDG62_13615 PF00199 Catalase CDG62_13645 PF00768 D-alanyl-D-alanine carboxypeptidase CDG62_13645 PF07943 Penicillin-binding protein 5, C-terminal domain CDG62_13650 PF00132 Bacterial transferase hexapeptide (six repeats) CDG62_13655 PF03466 LysR substrate binding domain CDG62_13655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_13660 PF00857 Isochorismatase family CDG62_13665 PF00293 NUDIX domain CDG62_13675 PF04356 Protein of unknown function (DUF489) CDG62_13680 PF00206 Lyase CDG62_13680 PF08328 Adenylosuccinate lyase C-terminal CDG62_13695 PF01494 FAD binding domain CDG62_13700 PF01494 FAD binding domain CDG62_13705 PF13737 Transposase DDE domain CDG62_13710 PF00990 Diguanylate cyclase, GGDEF domain CDG62_13710 PF17158 Membrane-associated sensor, integral membrane domain CDG62_13715 PF00557 Metallopeptidase family M24 CDG62_13715 PF05195 Aminopeptidase P, N-terminal domain CDG62_13720 PF03695 Uncharacterised protein family (UPF0149) CDG62_13745 PF00440 Bacterial regulatory proteins, tetR family CDG62_13745 PF17754 MftR C-terminal domain CDG62_13750 PF00753 Metallo-beta-lactamase superfamily CDG62_13755 PF00106 short chain dehydrogenase CDG62_13760 PF07836 DmpG-like communication domain CDG62_13760 PF00682 HMGL-like CDG62_13770 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDG62_13775 PF01494 FAD binding domain CDG62_13780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDG62_13785 PF00561 alpha/beta hydrolase fold CDG62_13790 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDG62_13805 PF04286 Protein of unknown function (DUF445) CDG62_13820 PF00289 Biotin carboxylase, N-terminal domain CDG62_13820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDG62_13820 PF00364 Biotin-requiring enzyme CDG62_13820 PF02785 Biotin carboxylase C-terminal domain CDG62_13830 PF07286 Protein of unknown function (DUF1445) CDG62_13835 PF03746 LamB/YcsF family CDG62_13840 PF01566 Natural resistance-associated macrophage protein CDG62_13845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_13855 PF13411 MerR HTH family regulatory protein CDG62_13860 PF01812 5-formyltetrahydrofolate cyclo-ligase family CDG62_13865 PF02190 ATP-dependent protease La (LON) substrate-binding domain CDG62_13865 PF05362 Lon protease (S16) C-terminal proteolytic domain CDG62_13865 PF00004 ATPase family associated with various cellular activities (AAA) CDG62_13875 PF04389 Peptidase family M28 CDG62_13880 PF02590 Predicted SPOUT methyltransferase CDG62_13885 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CDG62_13895 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDG62_13895 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CDG62_13900 PF04060 Putative Fe-S cluster CDG62_13905 PF10576 Iron-sulfur binding domain of endonuclease III CDG62_13905 PF00633 Helix-hairpin-helix motif CDG62_13905 PF00730 HhH-GPD superfamily base excision DNA repair protein CDG62_13915 PF05191 Adenylate kinase, active site lid CDG62_13930 PF00905 Penicillin binding protein transpeptidase domain CDG62_13930 PF03717 Penicillin-binding Protein dimerisation domain CDG62_13950 PF01553 Acyltransferase CDG62_13960 PF00884 Sulfatase CDG62_13965 PF04055 Radical SAM superfamily CDG62_13965 PF13186 Iron-sulfur cluster-binding domain CDG62_13985 PF00118 TCP-1/cpn60 chaperonin family CDG62_13990 PF00166 Chaperonin 10 Kd subunit CDG62_14000 PF00781 Diacylglycerol kinase catalytic domain CDG62_14005 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CDG62_14005 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CDG62_14010 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CDG62_14010 PF01266 FAD dependent oxidoreductase CDG62_14015 PF00083 Sugar (and other) transporter CDG62_14030 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CDG62_14030 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CDG62_14055 PF14765 Polyketide synthase dehydratase CDG62_14055 PF00550 Phosphopantetheine attachment site CDG62_14055 PF16197 Ketoacyl-synthetase C-terminal extension CDG62_14055 PF00698 Acyl transferase domain CDG62_14055 PF08659 KR domain CDG62_14055 PF08240 Alcohol dehydrogenase GroES-like domain CDG62_14055 PF00109 Beta-ketoacyl synthase, N-terminal domain CDG62_14055 PF02801 Beta-ketoacyl synthase, C-terminal domain CDG62_14070 PF03551 Transcriptional regulator PadR-like family CDG62_14085 PF00009 Elongation factor Tu GTP binding domain CDG62_14090 PF01507 Phosphoadenosine phosphosulfate reductase family CDG62_14095 PF14052 Capsule assembly protein Wzi CDG62_14100 PF01336 OB-fold nucleic acid binding domain CDG62_14100 PF00152 tRNA synthetases class II (D, K and N) CDG62_14110 PF00156 Phosphoribosyl transferase domain CDG62_14115 PF00301 Rubredoxin CDG62_14120 PF18113 Rubredoxin binding C-terminal domain CDG62_14120 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_14125 PF00561 alpha/beta hydrolase fold CDG62_14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_14130 PF03466 LysR substrate binding domain CDG62_14135 PF02503 Polyphosphate kinase middle domain CDG62_14135 PF13090 Polyphosphate kinase C-terminal domain 2 CDG62_14135 PF17941 Polyphosphate kinase C-terminal domain 1 CDG62_14135 PF13089 Polyphosphate kinase N-terminal domain CDG62_14140 PF00912 Transglycosylase CDG62_14145 PF01694 Rhomboid family CDG62_14155 PF00005 ABC transporter CDG62_14160 PF13472 GDSL-like Lipase/Acylhydrolase family CDG62_14165 PF00484 Carbonic anhydrase CDG62_14170 PF00561 alpha/beta hydrolase fold CDG62_14180 PF00593 TonB dependent receptor CDG62_14180 PF07715 TonB-dependent Receptor Plug Domain CDG62_14185 PF01521 Iron-sulphur cluster biosynthesis CDG62_14185 PF01106 NifU-like domain CDG62_14200 PF01384 Phosphate transporter family CDG62_14205 PF02965 Vitamin B12 dependent methionine synthase, activation domain CDG62_14205 PF02574 Homocysteine S-methyltransferase CDG62_14205 PF00809 Pterin binding enzyme CDG62_14205 PF02310 B12 binding domain CDG62_14205 PF02607 B12 binding domain CDG62_14240 PF07690 Major Facilitator Superfamily CDG62_14250 PF01327 Polypeptide deformylase CDG62_14255 PF00083 Sugar (and other) transporter CDG62_14270 PF04973 Nicotinamide mononucleotide transporter CDG62_14275 PF00378 Enoyl-CoA hydratase/isomerase CDG62_14295 PF00583 Acetyltransferase (GNAT) family CDG62_14300 PF00990 Diguanylate cyclase, GGDEF domain CDG62_14305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDG62_14310 PF07152 YaeQ protein CDG62_14315 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDG62_14315 PF07683 Cobalamin synthesis protein cobW C-terminal domain CDG62_14330 PF03061 Thioesterase superfamily CDG62_14335 PF01734 Patatin-like phospholipase CDG62_14340 PF02417 Chromate transporter CDG62_14345 PF01235 Sodium:alanine symporter family CDG62_14350 PF03616 Sodium/glutamate symporter CDG62_14370 PF07690 Major Facilitator Superfamily CDG62_14375 PF12805 FUSC-like inner membrane protein yccS CDG62_14385 PF00258 Flavodoxin CDG62_14385 PF00667 FAD binding domain CDG62_14385 PF00175 Oxidoreductase NAD-binding domain CDG62_14455 PF04304 Protein of unknown function (DUF454) CDG62_14470 PF07687 Peptidase dimerisation domain CDG62_14470 PF01546 Peptidase family M20/M25/M40 CDG62_14480 PF01627 Hpt domain CDG62_14480 PF01627 Hpt domain CDG62_14480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_14480 PF02895 Signal transducing histidine kinase, homodimeric domain CDG62_14480 PF01584 CheW-like domain CDG62_14480 PF07194 P2 response regulator binding domain CDG62_14480 PF07194 P2 response regulator binding domain CDG62_14480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_14480 PF01584 CheW-like domain CDG62_14480 PF02895 Signal transducing histidine kinase, homodimeric domain CDG62_14485 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CDG62_14485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDG62_14490 PF01584 CheW-like domain CDG62_14495 PF00072 Response regulator receiver domain CDG62_14500 PF00072 Response regulator receiver domain CDG62_14515 PF00873 AcrB/AcrD/AcrF family CDG62_14520 PF03129 Anticodon binding domain CDG62_14520 PF04073 Aminoacyl-tRNA editing domain CDG62_14520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDG62_14545 PF00692 dUTPase CDG62_14555 PF16868 NMT1-like family CDG62_14570 PF10609 NUBPL iron-transfer P-loop NTPase CDG62_14590 PF01588 Putative tRNA binding domain CDG62_14590 PF09334 tRNA synthetases class I (M) CDG62_14600 PF13737 Transposase DDE domain CDG62_14615 PF06100 MCRA family CDG62_14640 PF13533 Biotin-lipoyl like CDG62_14645 PF00291 Pyridoxal-phosphate dependent enzyme CDG62_14660 PF05552 Conserved TM helix CDG62_14675 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDG62_14680 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_14685 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_14690 PF00005 ABC transporter CDG62_14695 PF00194 Eukaryotic-type carbonic anhydrase CDG62_14700 PF00909 Ammonium Transporter Family CDG62_14715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_14715 PF00512 His Kinase A (phospho-acceptor) domain CDG62_14715 PF08521 Two-component sensor kinase N-terminal CDG62_14720 PF00072 Response regulator receiver domain CDG62_14720 PF00486 Transcriptional regulatory protein, C terminal CDG62_14725 PF00884 Sulfatase CDG62_14725 PF08019 Phosphoethanolamine transferase EptA/EptB CDG62_14745 PF01734 Patatin-like phospholipase CDG62_14755 PF01145 SPFH domain / Band 7 family CDG62_14760 PF00348 Polyprenyl synthetase CDG62_14765 PF04303 PrpF protein CDG62_14770 PF00324 Amino acid permease CDG62_14780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDG62_14785 PF00324 Amino acid permease CDG62_14790 PF00155 Aminotransferase class I and II CDG62_14805 PF14497 Glutathione S-transferase, C-terminal domain CDG62_14805 PF02798 Glutathione S-transferase, N-terminal domain CDG62_14820 PF03358 NADPH-dependent FMN reductase CDG62_14825 PF01758 Sodium Bile acid symporter family CDG62_14835 PF01022 Bacterial regulatory protein, arsR family CDG62_14840 PF03960 ArsC family CDG62_14850 PF05199 GMC oxidoreductase CDG62_14855 PF00171 Aldehyde dehydrogenase family CDG62_14860 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CDG62_14860 PF12833 Helix-turn-helix domain CDG62_14885 PF01507 Phosphoadenosine phosphosulfate reductase family CDG62_14890 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CDG62_14890 PF06974 Protein of unknown function (DUF1298) CDG62_14895 PF00575 S1 RNA binding domain CDG62_14895 PF10150 Ribonuclease E/G family CDG62_14900 PF02545 Maf-like protein CDG62_14905 PF04093 rod shape-determining protein MreD CDG62_14910 PF04085 rod shape-determining protein MreC CDG62_14920 PF02686 Glu-tRNAGln amidotransferase C subunit CDG62_14925 PF01425 Amidase CDG62_14930 PF02934 GatB/GatE catalytic domain CDG62_14930 PF02637 GatB domain CDG62_14975 PF05992 SbmA/BacA-like family CDG62_14990 PF04542 Sigma-70 region 2 CDG62_14990 PF08281 Sigma-70, region 4 CDG62_15020 PF02472 Biopolymer transport protein ExbD/TolR CDG62_15025 PF01618 MotA/TolQ/ExbB proton channel family CDG62_15030 PF02333 Phytase CDG62_15040 PF00990 Diguanylate cyclase, GGDEF domain CDG62_15040 PF00072 Response regulator receiver domain CDG62_15045 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CDG62_15045 PF12833 Helix-turn-helix domain CDG62_15055 PF00245 Alkaline phosphatase CDG62_15060 PF00245 Alkaline phosphatase CDG62_15075 PF03466 LysR substrate binding domain CDG62_15075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_15080 PF01144 Coenzyme A transferase CDG62_15085 PF01144 Coenzyme A transferase CDG62_15095 PF07715 TonB-dependent Receptor Plug Domain CDG62_15095 PF00593 TonB dependent receptor CDG62_15100 PF01011 PQQ enzyme repeat CDG62_15100 PF13360 PQQ-like domain CDG62_15105 PF04966 Carbohydrate-selective porin, OprB family CDG62_15110 PF05048 Periplasmic copper-binding protein (NosD) CDG62_15115 PF01487 Type I 3-dehydroquinase CDG62_15120 PF00775 Dioxygenase CDG62_15125 PF00775 Dioxygenase CDG62_15125 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CDG62_15130 PF02627 Carboxymuconolactone decarboxylase family CDG62_15135 PF07690 Major Facilitator Superfamily CDG62_15140 PF00561 alpha/beta hydrolase fold CDG62_15145 PF00206 Lyase CDG62_15145 PF10397 Adenylosuccinate lyase C-terminus CDG62_15150 PF02803 Thiolase, C-terminal domain CDG62_15150 PF00108 Thiolase, N-terminal domain CDG62_15155 PF01144 Coenzyme A transferase CDG62_15160 PF01144 Coenzyme A transferase CDG62_15165 PF01614 Bacterial transcriptional regulator CDG62_15165 PF09339 IclR helix-turn-helix domain CDG62_15180 PF00593 TonB dependent receptor CDG62_15180 PF07715 TonB-dependent Receptor Plug Domain CDG62_15185 PF00842 Alanine racemase, C-terminal domain CDG62_15185 PF01168 Alanine racemase, N-terminal domain CDG62_15190 PF00324 Amino acid permease CDG62_15195 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CDG62_15200 PF04996 Succinylarginine dihydrolase CDG62_15205 PF00171 Aldehyde dehydrogenase family CDG62_15210 PF04958 Arginine N-succinyltransferase beta subunit CDG62_15215 PF00202 Aminotransferase class-III CDG62_15220 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CDG62_15220 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDG62_15225 PF01037 Lrp/AsnC ligand binding domain CDG62_15230 PF13737 Transposase DDE domain CDG62_15235 PF00171 Aldehyde dehydrogenase family CDG62_15240 PF00202 Aminotransferase class-III CDG62_15245 PF00155 Aminotransferase class I and II CDG62_15245 PF00392 Bacterial regulatory proteins, gntR family CDG62_15250 PF00324 Amino acid permease CDG62_15265 PF01654 Cytochrome bd terminal oxidase subunit I CDG62_15270 PF02322 Cytochrome bd terminal oxidase subunit II CDG62_15280 PF00392 Bacterial regulatory proteins, gntR family CDG62_15280 PF00155 Aminotransferase class I and II CDG62_15290 PF04172 LrgB-like family CDG62_15295 PF03788 LrgA family CDG62_15300 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDG62_15300 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDG62_15310 PF01037 Lrp/AsnC ligand binding domain CDG62_15315 PF00892 EamA-like transporter family CDG62_15320 PF03466 LysR substrate binding domain CDG62_15320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_15325 PF07690 Major Facilitator Superfamily CDG62_15335 PF00149 Calcineurin-like phosphoesterase CDG62_15335 PF02872 5'-nucleotidase, C-terminal domain CDG62_15350 PF00577 Outer membrane usher protein CDG62_15350 PF13954 PapC N-terminal domain CDG62_15350 PF13953 PapC C-terminal domain CDG62_15370 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CDG62_15385 PF01039 Carboxyl transferase domain CDG62_15390 PF06857 Malonate decarboxylase delta subunit (MdcD) CDG62_15395 PF16957 Malonate decarboxylase, alpha subunit, transporter CDG62_15410 PF00392 Bacterial regulatory proteins, gntR family CDG62_15410 PF07729 FCD domain CDG62_15415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDG62_15415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDG62_15420 PF00392 Bacterial regulatory proteins, gntR family CDG62_15420 PF07729 FCD domain CDG62_15425 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CDG62_15430 PF00171 Aldehyde dehydrogenase family CDG62_15435 PF00701 Dihydrodipicolinate synthetase family CDG62_15440 PF07690 Major Facilitator Superfamily CDG62_15445 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CDG62_15445 PF08666 SAF domain CDG62_15450 PF00892 EamA-like transporter family CDG62_15455 PF00072 Response regulator receiver domain CDG62_15455 PF00486 Transcriptional regulatory protein, C terminal CDG62_15460 PF02702 Osmosensitive K+ channel His kinase sensor domain CDG62_15460 PF13493 Domain of unknown function (DUF4118) CDG62_15460 PF13492 GAF domain CDG62_15460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_15460 PF00512 His Kinase A (phospho-acceptor) domain CDG62_15465 PF02669 K+-transporting ATPase, c chain CDG62_15475 PF03814 Potassium-transporting ATPase A subunit CDG62_15480 PF02673 Bacitracin resistance protein BacA CDG62_15485 PF13737 Transposase DDE domain CDG62_15515 PF02350 UDP-N-acetylglucosamine 2-epimerase CDG62_15535 PF13737 Transposase DDE domain CDG62_15540 PF02661 Fic/DOC family CDG62_15540 PF13784 Fic/DOC family N-terminal CDG62_15545 PF00925 GTP cyclohydrolase II CDG62_15550 PF00290 Tryptophan synthase alpha chain CDG62_15555 PF00291 Pyridoxal-phosphate dependent enzyme CDG62_15560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_15560 PF03466 LysR substrate binding domain CDG62_15575 PF00072 Response regulator receiver domain CDG62_15575 PF00486 Transcriptional regulatory protein, C terminal CDG62_15580 PF08521 Two-component sensor kinase N-terminal CDG62_15580 PF00512 His Kinase A (phospho-acceptor) domain CDG62_15580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_15620 PF00293 NUDIX domain CDG62_15620 PF09297 NADH pyrophosphatase zinc ribbon domain CDG62_15625 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CDG62_15640 PF00576 HIUase/Transthyretin family CDG62_15660 PF00665 Integrase core domain CDG62_15660 PF13936 Helix-turn-helix domain CDG62_15670 PF13185 GAF domain CDG62_15670 PF00990 Diguanylate cyclase, GGDEF domain CDG62_15675 PF00990 Diguanylate cyclase, GGDEF domain CDG62_15675 PF00563 EAL domain CDG62_15675 PF03707 Bacterial signalling protein N terminal repeat CDG62_15690 PF00872 Transposase, Mutator family CDG62_15700 PF13737 Transposase DDE domain CDG62_15725 PF13356 Arm DNA-binding domain CDG62_15725 PF00589 Phage integrase family CDG62_15735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDG62_15735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDG62_15740 PF07690 Major Facilitator Superfamily CDG62_15745 PF00529 HlyD membrane-fusion protein of T1SS CDG62_15745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDG62_15750 PF03061 Thioesterase superfamily CDG62_15755 PF00490 Delta-aminolevulinic acid dehydratase CDG62_15760 PF01266 FAD dependent oxidoreductase CDG62_15765 PF08338 Domain of unknown function (DUF1731) CDG62_15765 PF01370 NAD dependent epimerase/dehydratase family CDG62_15775 PF00990 Diguanylate cyclase, GGDEF domain CDG62_15775 PF01590 GAF domain CDG62_15775 PF00563 EAL domain CDG62_15775 PF00360 Phytochrome region CDG62_15780 PF12320 Type 5 capsule protein repressor C-terminal domain CDG62_15780 PF00149 Calcineurin-like phosphoesterase CDG62_15795 PF01168 Alanine racemase, N-terminal domain CDG62_15800 PF00437 Type II/IV secretion system protein CDG62_15805 PF00437 Type II/IV secretion system protein CDG62_15810 PF01475 Ferric uptake regulator family CDG62_15815 PF04355 SmpA / OmlA family CDG62_15820 PF03658 RnfH family Ubiquitin CDG62_15830 PF01814 Hemerythrin HHE cation binding domain CDG62_15835 PF13230 Glutamine amidotransferases class-II CDG62_15840 PF00696 Amino acid kinase family CDG62_15845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDG62_15845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDG62_15845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDG62_15845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDG62_15850 PF00692 dUTPase CDG62_15855 PF13361 UvrD-like helicase C-terminal domain CDG62_15855 PF00580 UvrD/REP helicase N-terminal domain CDG62_15860 PF13488 Glycine zipper CDG62_15860 PF00691 OmpA family CDG62_15865 PF01553 Acyltransferase CDG62_15875 PF03775 Septum formation inhibitor MinC, C-terminal domain CDG62_15880 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDG62_15885 PF03776 Septum formation topological specificity factor MinE CDG62_15900 PF17854 FtsK alpha domain CDG62_15900 PF01580 FtsK/SpoIIIE family CDG62_15900 PF09397 Ftsk gamma domain CDG62_15900 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CDG62_15905 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG62_15910 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CDG62_15915 PF04377 Arginine-tRNA-protein transferase, C terminus CDG62_15915 PF04376 Arginine-tRNA-protein transferase, N terminus CDG62_15920 PF00583 Acetyltransferase (GNAT) family CDG62_15935 PF00743 Flavin-binding monooxygenase-like CDG62_15940 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CDG62_15940 PF12833 Helix-turn-helix domain CDG62_15945 PF03143 Elongation factor Tu C-terminal domain CDG62_15945 PF03144 Elongation factor Tu domain 2 CDG62_15945 PF00009 Elongation factor Tu GTP binding domain CDG62_15950 PF00009 Elongation factor Tu GTP binding domain CDG62_15950 PF00679 Elongation factor G C-terminus CDG62_15950 PF14492 Elongation Factor G, domain II CDG62_15950 PF03144 Elongation factor Tu domain 2 CDG62_15950 PF03764 Elongation factor G, domain IV CDG62_15955 PF00177 Ribosomal protein S7p/S5e CDG62_15960 PF00164 Ribosomal protein S12/S23 CDG62_15970 PF00109 Beta-ketoacyl synthase, N-terminal domain CDG62_15970 PF02801 Beta-ketoacyl synthase, C-terminal domain CDG62_15980 PF01757 Acyltransferase family CDG62_15985 PF00324 Amino acid permease CDG62_15990 PF01042 Endoribonuclease L-PSP CDG62_15995 PF01168 Alanine racemase, N-terminal domain CDG62_15995 PF00842 Alanine racemase, C-terminal domain CDG62_16000 PF01266 FAD dependent oxidoreductase CDG62_16005 PF01037 Lrp/AsnC ligand binding domain CDG62_16015 PF13419 Haloacid dehalogenase-like hydrolase CDG62_16020 PF08543 Phosphomethylpyrimidine kinase CDG62_16025 PF08378 Nuclease-related domain CDG62_16030 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CDG62_16030 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CDG62_16035 PF00893 Small Multidrug Resistance protein CDG62_16040 PF00893 Small Multidrug Resistance protein CDG62_16055 PF07731 Multicopper oxidase CDG62_16055 PF00394 Multicopper oxidase CDG62_16055 PF07732 Multicopper oxidase CDG62_16065 PF00834 Ribulose-phosphate 3 epimerase family CDG62_16080 PF05987 Bacterial protein of unknown function (DUF898) CDG62_16085 PF00756 Putative esterase CDG62_16095 PF04445 Putative SAM-dependent methyltransferase CDG62_16100 PF02673 Bacitracin resistance protein BacA CDG62_16105 PF00814 Glycoprotease family CDG62_16110 PF00132 Bacterial transferase hexapeptide (six repeats) CDG62_16115 PF00293 NUDIX domain CDG62_16155 PF00425 chorismate binding enzyme CDG62_16155 PF04715 Anthranilate synthase component I, N terminal region CDG62_16160 PF00155 Aminotransferase class I and II CDG62_16165 PF00815 Histidinol dehydrogenase CDG62_16175 PF01634 ATP phosphoribosyltransferase CDG62_16180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDG62_16185 PF01722 BolA-like protein CDG62_16190 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CDG62_16195 PF00309 Sigma-54 factor, Activator interacting domain (AID) CDG62_16195 PF04552 Sigma-54, DNA binding domain CDG62_16195 PF04963 Sigma-54 factor, core binding domain CDG62_16215 PF07690 Major Facilitator Superfamily CDG62_16250 PF04333 MlaA lipoprotein CDG62_16255 PF07228 Stage II sporulation protein E (SpoIIE) CDG62_16255 PF13426 PAS domain CDG62_16265 PF00795 Carbon-nitrogen hydrolase CDG62_16270 PF02566 OsmC-like protein CDG62_16280 PF00437 Type II/IV secretion system protein CDG62_16300 PF00476 DNA polymerase family A CDG62_16300 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CDG62_16300 PF01612 3'-5' exonuclease CDG62_16300 PF01367 5'-3' exonuclease, C-terminal SAM fold CDG62_16305 PF02325 YGGT family CDG62_16310 PF14748 Pyrroline-5-carboxylate reductase dimerisation CDG62_16310 PF03807 NADP oxidoreductase coenzyme F420-dependent CDG62_16315 PF01171 PP-loop family CDG62_16315 PF09179 TilS substrate binding domain CDG62_16315 PF11734 TilS substrate C-terminal domain CDG62_16320 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CDG62_16325 PF02541 Ppx/GppA phosphatase family CDG62_16330 PF00085 Thioredoxin CDG62_16335 PF07497 Rho termination factor, RNA-binding domain CDG62_16335 PF07498 Rho termination factor, N-terminal domain CDG62_16335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDG62_16345 PF00216 Bacterial DNA-binding protein CDG62_16350 PF01588 Putative tRNA binding domain CDG62_16350 PF03147 Ferredoxin-fold anticodon binding domain CDG62_16350 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CDG62_16350 PF03484 tRNA synthetase B5 domain CDG62_16350 PF03483 B3/4 domain CDG62_16355 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CDG62_16355 PF01409 tRNA synthetases class II core domain (F) CDG62_16375 PF00453 Ribosomal protein L20 CDG62_16380 PF01632 Ribosomal protein L35 CDG62_16395 PF09335 SNARE associated Golgi protein CDG62_16405 PF00043 Glutathione S-transferase, C-terminal domain CDG62_16405 PF02798 Glutathione S-transferase, N-terminal domain CDG62_16415 PF05198 Translation initiation factor IF-3, N-terminal domain CDG62_16415 PF00707 Translation initiation factor IF-3, C-terminal domain CDG62_16420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDG62_16420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDG62_16420 PF03129 Anticodon binding domain CDG62_16420 PF02824 TGS domain CDG62_16425 PF13193 AMP-binding enzyme C-terminal domain CDG62_16425 PF00501 AMP-binding enzyme CDG62_16430 PF04751 Protein of unknown function (DUF615) CDG62_16435 PF00381 PTS HPr component phosphorylation site CDG62_16440 PF03668 P-loop ATPase protein family CDG62_16445 PF02569 Pantoate-beta-alanine ligase CDG62_16450 PF02548 Ketopantoate hydroxymethyltransferase CDG62_16455 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CDG62_16460 PF12626 Polymerase A arginine-rich C-terminus CDG62_16460 PF12627 Probable RNA and SrmB- binding site of polymerase A CDG62_16460 PF01743 Poly A polymerase head domain CDG62_16470 PF03819 MazG nucleotide pyrophosphohydrolase domain CDG62_16480 PF02824 TGS domain CDG62_16480 PF04607 Region found in RelA / SpoT proteins CDG62_16480 PF13291 ACT domain CDG62_16485 PF05958 tRNA (Uracil-5-)-methyltransferase CDG62_16495 PF00291 Pyridoxal-phosphate dependent enzyme CDG62_16500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_16500 PF00672 HAMP domain CDG62_16500 PF00512 His Kinase A (phospho-acceptor) domain CDG62_16500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDG62_16500 PF00072 Response regulator receiver domain CDG62_16500 PF01627 Hpt domain CDG62_16505 PF00378 Enoyl-CoA hydratase/isomerase CDG62_16510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CDG62_16510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CDG62_16515 PF01261 Xylose isomerase-like TIM barrel CDG62_16530 PF00672 HAMP domain CDG62_16530 PF00909 Ammonium Transporter Family CDG62_16535 PF02233 NAD(P) transhydrogenase beta subunit CDG62_16540 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CDG62_16545 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CDG62_16545 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CDG62_16550 PF07690 Major Facilitator Superfamily CDG62_16615 PF13361 UvrD-like helicase C-terminal domain CDG62_16615 PF00580 UvrD/REP helicase N-terminal domain CDG62_16620 PF02463 RecF/RecN/SMC N terminal domain CDG62_16675 PF00872 Transposase, Mutator family CDG62_16690 PF00589 Phage integrase family CDG62_16695 PF01207 Dihydrouridine synthase (Dus) CDG62_16700 PF01569 PAP2 superfamily CDG62_16705 PF00899 ThiF family CDG62_16715 PF00694 Aconitase C-terminal domain CDG62_16715 PF00330 Aconitase family (aconitate hydratase) CDG62_16720 PF01026 TatD related DNase CDG62_16735 PF00009 Elongation factor Tu GTP binding domain CDG62_16735 PF16658 Class II release factor RF3, C-terminal domain CDG62_16735 PF03144 Elongation factor Tu domain 2 CDG62_16745 PF03707 Bacterial signalling protein N terminal repeat CDG62_16745 PF00990 Diguanylate cyclase, GGDEF domain CDG62_16745 PF00563 EAL domain CDG62_16750 PF17804 Tail specific protease N-terminal domain CDG62_16750 PF03572 Peptidase family S41 CDG62_16750 PF00595 PDZ domain CDG62_16750 PF11818 C-terminal domain of tail specific protease (DUF3340) CDG62_16755 PF00933 Glycosyl hydrolase family 3 N terminal domain CDG62_16770 PF00171 Aldehyde dehydrogenase family CDG62_16775 PF00871 Acetokinase family CDG62_16780 PF01515 Phosphate acetyl/butaryl transferase CDG62_16780 PF07085 DRTGG domain CDG62_16795 PF00872 Transposase, Mutator family CDG62_16805 PF05163 DinB family CDG62_16810 PF00892 EamA-like transporter family CDG62_16815 PF02311 AraC-like ligand binding domain CDG62_16815 PF12833 Helix-turn-helix domain CDG62_16825 PF05681 Fumarate hydratase (Fumerase) CDG62_16825 PF05683 Fumarase C-terminus CDG62_16840 PF10431 C-terminal, D2-small domain, of ClpB protein CDG62_16840 PF07724 AAA domain (Cdc48 subfamily) CDG62_16840 PF06689 ClpX C4-type zinc finger CDG62_16845 PF00574 Clp protease CDG62_16850 PF05697 Bacterial trigger factor protein (TF) CDG62_16850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDG62_16850 PF05698 Bacterial trigger factor protein (TF) C-terminus CDG62_16855 PF00593 TonB dependent receptor CDG62_16855 PF07715 TonB-dependent Receptor Plug Domain CDG62_16860 PF07715 TonB-dependent Receptor Plug Domain CDG62_16860 PF00593 TonB dependent receptor CDG62_16865 PF13640 2OG-Fe(II) oxygenase superfamily CDG62_16865 PF18331 PKHD-type hydroxylase C-terminal domain CDG62_16870 PF00682 HMGL-like CDG62_16870 PF08502 LeuA allosteric (dimerisation) domain CDG62_16875 PF00561 alpha/beta hydrolase fold CDG62_16880 PF00561 alpha/beta hydrolase fold CDG62_16880 PF07021 Methionine biosynthesis protein MetW CDG62_16890 PF01725 Ham1 family CDG62_16900 PF02416 mttA/Hcf106 family CDG62_16905 PF02416 mttA/Hcf106 family CDG62_16910 PF00902 Sec-independent protein translocase protein (TatC) CDG62_16925 PF01790 Prolipoprotein diacylglyceryl transferase CDG62_16945 PF00303 Thymidylate synthase CDG62_16950 PF00186 Dihydrofolate reductase CDG62_16965 PF01625 Peptide methionine sulfoxide reductase CDG62_16975 PF01618 MotA/TolQ/ExbB proton channel family CDG62_16985 PF01842 ACT domain CDG62_16985 PF00551 Formyl transferase CDG62_16995 PF00171 Aldehyde dehydrogenase family CDG62_17000 PF00830 Ribosomal L28 family CDG62_17005 PF00471 Ribosomal protein L33 CDG62_17010 PF00999 Sodium/hydrogen exchanger family CDG62_17010 PF02254 TrkA-N domain CDG62_17035 PF13361 UvrD-like helicase C-terminal domain CDG62_17035 PF00580 UvrD/REP helicase N-terminal domain CDG62_17040 PF02595 Glycerate kinase family CDG62_17055 PF00293 NUDIX domain CDG62_17060 PF08272 Topoisomerase I zinc-ribbon-like CDG62_17060 PF01751 Toprim domain CDG62_17060 PF01131 DNA topoisomerase CDG62_17060 PF01396 Topoisomerase DNA binding C4 zinc finger CDG62_17075 PF04102 SlyX CDG62_17090 PF03279 Bacterial lipid A biosynthesis acyltransferase CDG62_17105 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDG62_17105 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDG62_17125 PF01416 tRNA pseudouridine synthase CDG62_17135 PF01176 Translation initiation factor 1A / IF-1 CDG62_17150 PF00180 Isocitrate/isopropylmalate dehydrogenase CDG62_17160 PF00694 Aconitase C-terminal domain CDG62_17165 PF00330 Aconitase family (aconitate hydratase) CDG62_17175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_17175 PF03466 LysR substrate binding domain CDG62_17195 PF00293 NUDIX domain CDG62_17200 PF02896 PEP-utilising enzyme, TIM barrel domain CDG62_17200 PF05524 PEP-utilising enzyme, N-terminal CDG62_17200 PF01590 GAF domain CDG62_17200 PF00391 PEP-utilising enzyme, mobile domain CDG62_17210 PF01810 LysE type translocator CDG62_17215 PF13404 AsnC-type helix-turn-helix domain CDG62_17215 PF01037 Lrp/AsnC ligand binding domain CDG62_17225 PF02770 Acyl-CoA dehydrogenase, middle domain CDG62_17225 PF18158 Adaptive response protein AidB N-terminal domain CDG62_17225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG62_17245 PF00141 Peroxidase CDG62_17250 PF12706 Beta-lactamase superfamily domain CDG62_17260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_17260 PF03466 LysR substrate binding domain CDG62_17275 PF01479 S4 domain CDG62_17275 PF00849 RNA pseudouridylate synthase CDG62_17285 PF00575 S1 RNA binding domain CDG62_17285 PF10150 Ribonuclease E/G family CDG62_17285 PF12111 Polyribonucleotide phosphorylase C terminal CDG62_17290 PF00501 AMP-binding enzyme CDG62_17290 PF13193 AMP-binding enzyme C-terminal domain CDG62_17315 PF04024 PspC domain CDG62_17335 PF02091 Glycyl-tRNA synthetase alpha subunit CDG62_17340 PF05746 DALR anticodon binding domain CDG62_17340 PF02092 Glycyl-tRNA synthetase beta subunit CDG62_17370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDG62_17370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDG62_17385 PF01209 ubiE/COQ5 methyltransferase family CDG62_17410 PF03884 DNA gyrase inhibitor YacG CDG62_17415 PF00753 Metallo-beta-lactamase superfamily CDG62_17420 PF00762 Ferrochelatase CDG62_17430 PF01177 Asp/Glu/Hydantoin racemase CDG62_17450 PF01206 Sulfurtransferase TusA CDG62_17455 PF00571 CBS domain CDG62_17455 PF03471 Transporter associated domain CDG62_17460 PF00795 Carbon-nitrogen hydrolase CDG62_17465 PF01588 Putative tRNA binding domain CDG62_17475 PF07963 Prokaryotic N-terminal methylation motif CDG62_17475 PF08334 Type II secretion system (T2SS), protein G CDG62_17480 PF00482 Type II secretion system (T2SS), protein F CDG62_17485 PF00270 DEAD/DEAH box helicase CDG62_17485 PF00271 Helicase conserved C-terminal domain CDG62_17485 PF17764 3′ DNA-binding domain (3′BD) CDG62_17485 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CDG62_17485 PF18074 Primosomal protein N C-terminal domain CDG62_17490 PF02254 TrkA-N domain CDG62_17490 PF00999 Sodium/hydrogen exchanger family CDG62_17495 PF01430 Hsp33 protein CDG62_17505 PF01556 DnaJ C terminal domain CDG62_17505 PF00226 DnaJ domain CDG62_17515 PF04325 Protein of unknown function (DUF465) CDG62_17520 PF01544 CorA-like Mg2+ transporter protein CDG62_17525 PF01138 3' exoribonuclease family, domain 1 CDG62_17525 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CDG62_17525 PF00013 KH domain CDG62_17525 PF00575 S1 RNA binding domain CDG62_17525 PF03725 3' exoribonuclease family, domain 2 CDG62_17530 PF00312 Ribosomal protein S15 CDG62_17540 PF13538 UvrD-like helicase C-terminal domain CDG62_17545 PF13361 UvrD-like helicase C-terminal domain CDG62_17545 PF00580 UvrD/REP helicase N-terminal domain CDG62_17545 PF12705 PD-(D/E)XK nuclease superfamily CDG62_17550 PF17946 RecC C-terminal domain CDG62_17560 PF03976 Polyphosphate kinase 2 (PPK2) CDG62_17570 PF01209 ubiE/COQ5 methyltransferase family CDG62_17580 PF03109 ABC1 family CDG62_17595 PF01494 FAD binding domain CDG62_17600 PF01502 Phosphoribosyl-AMP cyclohydrolase CDG62_17610 PF02463 RecF/RecN/SMC N terminal domain CDG62_17615 PF13244 Domain of unknown function (DUF4040) CDG62_17615 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CDG62_17615 PF00361 Proton-conducting membrane transporter CDG62_17615 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CDG62_17620 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CDG62_17625 PF00361 Proton-conducting membrane transporter CDG62_17635 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CDG62_17645 PF02033 Ribosome-binding factor A CDG62_17650 PF11987 Translation-initiation factor 2 CDG62_17650 PF04760 Translation initiation factor IF-2, N-terminal region CDG62_17650 PF00009 Elongation factor Tu GTP binding domain CDG62_17650 PF08364 Bacterial translation initiation factor IF-2 associated region CDG62_17655 PF00575 S1 RNA binding domain CDG62_17655 PF08529 NusA N-terminal domain CDG62_17655 PF13184 NusA-like KH domain CDG62_17660 PF17384 RimP C-terminal SH3 domain CDG62_17660 PF02576 RimP N-terminal domain CDG62_17690 PF03840 Preprotein translocase SecG subunit CDG62_17695 PF00121 Triosephosphate isomerase CDG62_17700 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CDG62_17700 PF00437 Type II/IV secretion system protein CDG62_17705 PF00482 Type II secretion system (T2SS), protein F CDG62_17710 PF06750 Bacterial Peptidase A24 N-terminal domain CDG62_17710 PF01478 Type IV leader peptidase family CDG62_17715 PF01121 Dephospho-CoA kinase CDG62_17725 PF00588 SpoU rRNA Methylase family CDG62_17725 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDG62_17730 PF06865 Pyrimidine/purine nucleoside phosphorylase CDG62_17735 PF02463 RecF/RecN/SMC N terminal domain CDG62_17740 PF02622 Uncharacterized ACR, COG1678 CDG62_17745 PF03652 Holliday junction resolvase CDG62_17750 PF00529 HlyD membrane-fusion protein of T1SS CDG62_17750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDG62_17760 PF04632 Fusaric acid resistance protein family CDG62_17775 PF00005 ABC transporter CDG62_17775 PF00664 ABC transporter transmembrane region CDG62_17780 PF01066 CDP-alcohol phosphatidyltransferase CDG62_17790 PF01541 GIY-YIG catalytic domain CDG62_17790 PF02151 UvrB/uvrC motif CDG62_17790 PF08459 UvrC Helix-hairpin-helix N-terminal CDG62_17810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDG62_17810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDG62_17810 PF00378 Enoyl-CoA hydratase/isomerase CDG62_17815 PF02803 Thiolase, C-terminal domain CDG62_17815 PF00108 Thiolase, N-terminal domain CDG62_17825 PF13737 Transposase DDE domain CDG62_17835 PF09313 Domain of unknown function (DUF1971) CDG62_17835 PF03848 Tellurite resistance protein TehB CDG62_17860 PF01323 DSBA-like thioredoxin domain CDG62_17885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_17885 PF00183 Hsp90 protein CDG62_17895 PF03922 OmpW family CDG62_17900 PF03553 Na+/H+ antiporter family CDG62_17900 PF13726 Na+-H+ antiporter family CDG62_17925 PF04998 RNA polymerase Rpb1, domain 5 CDG62_17925 PF00623 RNA polymerase Rpb1, domain 2 CDG62_17925 PF05000 RNA polymerase Rpb1, domain 4 CDG62_17925 PF04997 RNA polymerase Rpb1, domain 1 CDG62_17925 PF04983 RNA polymerase Rpb1, domain 3 CDG62_17935 PF04560 RNA polymerase Rpb2, domain 7 CDG62_17935 PF04561 RNA polymerase Rpb2, domain 2 CDG62_17935 PF00562 RNA polymerase Rpb2, domain 6 CDG62_17935 PF10385 RNA polymerase beta subunit external 1 domain CDG62_17935 PF04565 RNA polymerase Rpb2, domain 3 CDG62_17935 PF04563 RNA polymerase beta subunit CDG62_17940 PF16320 Ribosomal protein L7/L12 dimerisation domain CDG62_17940 PF00542 Ribosomal protein L7/L12 C-terminal domain CDG62_17945 PF00466 Ribosomal protein L10 CDG62_17950 PF00687 Ribosomal protein L1p/L10e family CDG62_17955 PF03946 Ribosomal protein L11, N-terminal domain CDG62_17955 PF00298 Ribosomal protein L11, RNA binding domain CDG62_17960 PF00467 KOW motif CDG62_17960 PF02357 Transcription termination factor nusG CDG62_17965 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CDG62_17975 PF03144 Elongation factor Tu domain 2 CDG62_17975 PF00009 Elongation factor Tu GTP binding domain CDG62_17975 PF03143 Elongation factor Tu C-terminal domain CDG62_18000 PF04715 Anthranilate synthase component I, N terminal region CDG62_18000 PF00425 chorismate binding enzyme CDG62_18005 PF13419 Haloacid dehalogenase-like hydrolase CDG62_18010 PF16697 Inner membrane component of T3SS, cytoplasmic domain CDG62_18015 PF03958 Bacterial type II/III secretion system short domain CDG62_18015 PF00263 Bacterial type II and III secretion system protein CDG62_18020 PF11356 Type II secretion system protein C CDG62_18030 PF00816 H-NS histone family CDG62_18035 PF03061 Thioesterase superfamily CDG62_18055 PF03900 Porphobilinogen deaminase, C-terminal domain CDG62_18055 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CDG62_18060 PF00072 Response regulator receiver domain CDG62_18060 PF04397 LytTr DNA-binding domain CDG62_18065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_18065 PF06580 Histidine kinase CDG62_18065 PF07694 5TMR of 5TMR-LYT CDG62_18070 PF00206 Lyase CDG62_18070 PF14698 Argininosuccinate lyase C-terminal CDG62_18075 PF04362 Bacterial Fe(2+) trafficking CDG62_18080 PF01895 PhoU domain CDG62_18085 PF02321 Outer membrane efflux protein CDG62_18095 PF13667 ThiC-associated domain CDG62_18095 PF01964 Radical SAM ThiC family CDG62_18100 PF00293 NUDIX domain CDG62_18105 PF00149 Calcineurin-like phosphoesterase CDG62_18110 PF01258 Prokaryotic dksA/traR C4-type zinc finger CDG62_18115 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDG62_18120 PF01098 Cell cycle protein CDG62_18125 PF02875 Mur ligase family, glutamate ligase domain CDG62_18125 PF08245 Mur ligase middle domain CDG62_18135 PF07664 Ferrous iron transport protein B C terminus CDG62_18135 PF02421 Ferrous iron transport protein B CDG62_18135 PF07670 Nucleoside recognition CDG62_18145 PF00589 Phage integrase family CDG62_18145 PF02899 Phage integrase, N-terminal SAM-like domain CDG62_18150 PF13098 Thioredoxin-like domain CDG62_18150 PF10411 Disulfide bond isomerase protein N-terminus CDG62_18160 PF00742 Homoserine dehydrogenase CDG62_18160 PF03447 Homoserine dehydrogenase, NAD binding domain CDG62_18160 PF01842 ACT domain CDG62_18165 PF00291 Pyridoxal-phosphate dependent enzyme CDG62_18170 PF00768 D-alanyl-D-alanine carboxypeptidase CDG62_18175 PF00196 Bacterial regulatory proteins, luxR family CDG62_18175 PF00072 Response regulator receiver domain CDG62_18180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG62_18180 PF00512 His Kinase A (phospho-acceptor) domain CDG62_18185 PF00072 Response regulator receiver domain CDG62_18185 PF00158 Sigma-54 interaction domain CDG62_18185 PF02954 Bacterial regulatory protein, Fis family CDG62_18190 PF00595 PDZ domain CDG62_18190 PF03572 Peptidase family S41 CDG62_18195 PF01676 Metalloenzyme superfamily CDG62_18195 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CDG62_18200 PF03739 Lipopolysaccharide export system permease LptF/LptG CDG62_18205 PF03739 Lipopolysaccharide export system permease LptF/LptG CDG62_18210 PF00883 Cytosol aminopeptidase family, catalytic domain CDG62_18210 PF02789 Cytosol aminopeptidase family, N-terminal domain CDG62_18225 PF09335 SNARE associated Golgi protein CDG62_18230 PF00677 Lumazine binding domain CDG62_18240 PF01872 RibD C-terminal domain CDG62_18240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDG62_18245 PF03477 ATP cone domain CDG62_18250 PF00909 Ammonium Transporter Family CDG62_18255 PF00543 Nitrogen regulatory protein P-II CDG62_18265 PF01078 Magnesium chelatase, subunit ChlI CDG62_18265 PF13335 Magnesium chelatase, subunit ChlI C-terminal CDG62_18280 PF03573 outer membrane porin, OprD family CDG62_18285 PF00719 Inorganic pyrophosphatase CDG62_18300 PF00501 AMP-binding enzyme CDG62_18300 PF13193 AMP-binding enzyme C-terminal domain CDG62_18305 PF00521 DNA gyrase/topoisomerase IV, subunit A CDG62_18305 PF03989 DNA gyrase C-terminal domain, beta-propeller CDG62_18310 PF07690 Major Facilitator Superfamily CDG62_18315 PF03458 UPF0126 domain CDG62_18320 PF02810 SEC-C motif CDG62_18325 PF03741 Integral membrane protein TerC family CDG62_18325 PF03471 Transporter associated domain CDG62_18330 PF03641 Possible lysine decarboxylase CDG62_18345 PF07690 Major Facilitator Superfamily CDG62_18355 PF00817 impB/mucB/samB family CDG62_18355 PF11799 impB/mucB/samB family C-terminal domain CDG62_18355 PF11798 IMS family HHH motif CDG62_18375 PF11842 Domain of unknown function (DUF3362) CDG62_18375 PF08497 Radical SAM N-terminal CDG62_18375 PF04055 Radical SAM superfamily CDG62_18420 PF01327 Polypeptide deformylase CDG62_18430 PF02481 DNA recombination-mediator protein A CDG62_18430 PF17782 DprA winged helix domain CDG62_18435 PF01300 Telomere recombination CDG62_18440 PF00892 EamA-like transporter family CDG62_18450 PF00255 Glutathione peroxidase CDG62_18480 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CDG62_18485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDG62_18485 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDG62_18490 PF00231 ATP synthase CDG62_18495 PF00306 ATP synthase alpha/beta chain, C terminal domain CDG62_18495 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDG62_18495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDG62_18500 PF00213 ATP synthase delta (OSCP) subunit CDG62_18505 PF00430 ATP synthase B/B' CF(0) CDG62_18510 PF00137 ATP synthase subunit C CDG62_18515 PF00119 ATP synthase A chain CDG62_18535 PF00005 ABC transporter CDG62_18540 PF00950 ABC 3 transport family CDG62_18550 PF01810 LysE type translocator CDG62_18555 PF04261 Dyp-type peroxidase family CDG62_18570 PF13737 Transposase DDE domain CDG62_18585 PF16671 Actin cross-linking domain CDG62_18585 PF04717 Type VI secretion system, phage-baseplate injector CDG62_18590 PF00390 Malic enzyme, N-terminal domain CDG62_18590 PF03949 Malic enzyme, NAD binding domain CDG62_18605 PF03485 Arginyl tRNA synthetase N terminal domain CDG62_18605 PF05746 DALR anticodon binding domain CDG62_18605 PF00750 tRNA synthetases class I (R) CDG62_18615 PF00561 alpha/beta hydrolase fold CDG62_18630 PF02678 Pirin CDG62_18630 PF05726 Pirin C-terminal cupin domain CDG62_18640 PF00117 Glutamine amidotransferase class-I CDG62_18640 PF02540 NAD synthase CDG62_18640 PF00958 GMP synthase C terminal domain CDG62_18650 PF07681 DoxX CDG62_18655 PF09335 SNARE associated Golgi protein CDG62_18670 PF13614 AAA domain CDG62_18680 PF01722 BolA-like protein CDG62_18705 PF00109 Beta-ketoacyl synthase, N-terminal domain CDG62_18705 PF02801 Beta-ketoacyl synthase, C-terminal domain CDG62_18720 PF02801 Beta-ketoacyl synthase, C-terminal domain CDG62_18720 PF00109 Beta-ketoacyl synthase, N-terminal domain CDG62_18730 PF04820 Tryptophan halogenase CDG62_18750 PF00221 Aromatic amino acid lyase CDG62_18760 PF00535 Glycosyl transferase family 2 CDG62_18760 PF00795 Carbon-nitrogen hydrolase CDG62_18765 PF07977 FabA-like domain CDG62_18775 PF00550 Phosphopantetheine attachment site CDG62_18780 PF00550 Phosphopantetheine attachment site CDG62_18795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG62_18795 PF03466 LysR substrate binding domain CDG62_18800 PF02677 Epoxyqueuosine reductase QueH CDG62_18810 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CDG62_18810 PF00925 GTP cyclohydrolase II CDG62_18815 PF00885 6,7-dimethyl-8-ribityllumazine synthase CDG62_18820 PF01029 NusB family CDG62_18825 PF02769 AIR synthase related protein, C-terminal domain CDG62_18825 PF00586 AIR synthase related protein, N-terminal domain CDG62_18830 PF04608 Phosphatidylglycerophosphatase A CDG62_18835 PF00132 Bacterial transferase hexapeptide (six repeats) CDG62_18835 PF14602 Hexapeptide repeat of succinyl-transferase CDG62_18835 PF12804 MobA-like NTP transferase domain CDG62_18840 PF01380 SIS domain CDG62_18845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDG62_18845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDG62_18845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDG62_18845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDG62_18850 PF16363 GDP-mannose 4,6 dehydratase CDG62_18855 PF00342 Phosphoglucose isomerase CDG62_18860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDG62_18860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDG62_18860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDG62_18865 PF00483 Nucleotidyl transferase CDG62_18870 PF02719 Polysaccharide biosynthesis protein CDG62_18875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CDG62_18880 PF17836 PglD N-terminal domain CDG62_18880 PF14602 Hexapeptide repeat of succinyl-transferase CDG62_18880 PF00132 Bacterial transferase hexapeptide (six repeats) CDG62_18885 PF02397 Bacterial sugar transferase CDG62_18910 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CDG62_18915 PF14602 Hexapeptide repeat of succinyl-transferase CDG62_18915 PF00132 Bacterial transferase hexapeptide (six repeats) CDG62_18915 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CDG62_18920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDG62_18920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDG62_18925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDG62_18925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDG62_18925 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDG62_18930 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CDG62_18930 PF10531 SLBB domain CDG62_18930 PF02563 Polysaccharide biosynthesis/export protein CDG62_18935 PF01451 Low molecular weight phosphotyrosine protein phosphatase CDG62_18940 PF02706 Chain length determinant protein CDG62_18940 PF13807 G-rich domain on putative tyrosine kinase CDG62_18940 PF13614 AAA domain CDG62_18945 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CDG62_18945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDG62_18950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDG62_18950 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CDG62_18955 PF03023 Lipid II flippase MurJ CDG62_18960 PF01510 N-acetylmuramoyl-L-alanine amidase CDG62_18965 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CDG62_18965 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CDG62_18970 PF01138 3' exoribonuclease family, domain 1 CDG62_18970 PF03725 3' exoribonuclease family, domain 2 CDG62_18975 PF00440 Bacterial regulatory proteins, tetR family CDG62_18980 PF15864 Protein glycosylation ligase CDG62_18980 PF11846 Virulence factor membrane-bound polymerase, C-terminal CDG62_18980 PF04932 O-Antigen ligase CDG62_18985 PF01323 DSBA-like thioredoxin domain CDG62_18995 PF13419 Haloacid dehalogenase-like hydrolase CDG62_19000 PF00106 short chain dehydrogenase CDG62_19020 PF00696 Amino acid kinase family CDG62_19020 PF00583 Acetyltransferase (GNAT) family CDG62_19025 PF09084 NMT1/THI5 like CDG62_19030 PF09084 NMT1/THI5 like CDG62_19035 PF00296 Luciferase-like monooxygenase CDG62_19040 PF00528 Binding-protein-dependent transport system inner membrane component CDG62_19045 PF00005 ABC transporter CDG62_19050 PF08362 YcdC-like protein, C-terminal region CDG62_19050 PF00440 Bacterial regulatory proteins, tetR family CDG62_19065 PF01687 Riboflavin kinase CDG62_19065 PF06574 FAD synthetase CDG62_19070 PF08264 Anticodon-binding domain of tRNA CDG62_19070 PF06827 Zinc finger found in FPG and IleRS CDG62_19070 PF00133 tRNA synthetases class I (I, L, M and V) CDG62_19075 PF01252 Signal peptidase (SPase) II CDG62_19080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDG62_19100 PF07995 Glucose / Sorbosone dehydrogenase CDG62_19130 PF00579 tRNA synthetases class I (W and Y) CDG62_19135 PF03702 Anhydro-N-acetylmuramic acid kinase CDG62_19140 PF13406 Transglycosylase SLT domain CDG62_19145 PF02222 ATP-grasp domain CDG62_19145 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CDG62_19150 PF00731 AIR carboxylase CDG62_19160 PF01225 Mur ligase family, catalytic domain CDG62_19160 PF08245 Mur ligase middle domain CDG62_19160 PF02875 Mur ligase family, glutamate ligase domain CDG62_19180 PF03741 Integral membrane protein TerC family CDG62_19190 PF03738 Glutathionylspermidine synthase preATP-grasp CDG62_19200 PF01979 Amidohydrolase family CDG62_19205 PF00156 Phosphoribosyl transferase domain CDG62_19215 PF10411 Disulfide bond isomerase protein N-terminus CDG62_19215 PF13098 Thioredoxin-like domain CDG62_19220 PF01545 Cation efflux family CDG62_19220 PF16916 Dimerisation domain of Zinc Transporter CDG62_19225 PF02583 Metal-sensitive transcriptional repressor CDG62_19230 PF07690 Major Facilitator Superfamily CDG62_19235 PF12631 MnmE helical domain CDG62_19235 PF01926 50S ribosome-binding GTPase CDG62_19235 PF10396 GTP-binding protein TrmE N-terminus CDG62_19240 PF02096 60Kd inner membrane protein CDG62_19240 PF14849 YidC periplasmic domain CDG62_19245 PF01809 Putative membrane protein insertion efficiency factor CDG62_19250 PF00825 Ribonuclease P CDG62_19255 PF00468 Ribosomal protein L34