CDG62_15855 03d6694839bb4f32994739043d9a2055 679 Gene3D G3DSA:3.40.50.300 8 272 2.9E-91 T 23-10-2018 CDG62_15855 03d6694839bb4f32994739043d9a2055 679 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 5 678 38.894 T 23-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CDG62_15855 03d6694839bb4f32994739043d9a2055 679 Gene3D G3DSA:1.10.486.10 384 553 2.7E-117 T 23-10-2018 CDG62_15855 03d6694839bb4f32994739043d9a2055 679 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 272 1.7E-72 T 23-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CDG62_15855 03d6694839bb4f32994739043d9a2055 679 SUPERFAMILY SSF52540 5 647 2.06E-157 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_15855 03d6694839bb4f32994739043d9a2055 679 Gene3D G3DSA:1.10.10.160 112 188 2.9E-91 T 23-10-2018 IPR013986 DExx box DNA helicase domain superfamily CDG62_15855 03d6694839bb4f32994739043d9a2055 679 Gene3D G3DSA:3.40.50.300 281 641 2.7E-117 T 23-10-2018 CDG62_15855 03d6694839bb4f32994739043d9a2055 679 Pfam PF13361 UvrD-like helicase C-terminal domain 278 622 2.0E-70 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDG62_14305 7b0e43be8083c7b17ac6c8fce594b7ff 112 SUPERFAMILY SSF54534 4 109 2.16E-40 T 23-10-2018 CDG62_14305 7b0e43be8083c7b17ac6c8fce594b7ff 112 Gene3D G3DSA:3.10.50.40 1 112 2.3E-43 T 23-10-2018 CDG62_14305 7b0e43be8083c7b17ac6c8fce594b7ff 112 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 16 105 4.8E-33 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG62_10405 2de19689935a3d71f5c88dcd0ccb3901 697 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 355 4.1E-134 T 23-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CDG62_10405 2de19689935a3d71f5c88dcd0ccb3901 697 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 40 58 2.0E-5 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG62_10405 2de19689935a3d71f5c88dcd0ccb3901 697 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 123 141 2.0E-5 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG62_10405 2de19689935a3d71f5c88dcd0ccb3901 697 Pfam PF13177 DNA polymerase III, delta subunit 19 177 1.4E-39 T 23-10-2018 CDG62_10405 2de19689935a3d71f5c88dcd0ccb3901 697 Gene3D G3DSA:1.20.272.10 241 361 6.2E-32 T 23-10-2018 CDG62_10405 2de19689935a3d71f5c88dcd0ccb3901 697 Gene3D G3DSA:1.10.8.60 7 239 1.0E-102 T 23-10-2018 CDG62_10405 2de19689935a3d71f5c88dcd0ccb3901 697 SUPERFAMILY SSF48019 242 364 2.55E-26 T 23-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CDG62_10405 2de19689935a3d71f5c88dcd0ccb3901 697 SUPERFAMILY SSF52540 32 222 6.9E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10405 2de19689935a3d71f5c88dcd0ccb3901 697 Gene3D G3DSA:3.40.50.300 12 176 1.0E-102 T 23-10-2018 CDG62_10405 2de19689935a3d71f5c88dcd0ccb3901 697 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 369 1.2E-26 T 23-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CDG62_10405 2de19689935a3d71f5c88dcd0ccb3901 697 SMART SM00382 36 177 3.9E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_18140 1fca1c1055abf09898cd0c083ac2ab60 113 Pfam PF04023 FeoA domain 28 107 4.7E-15 T 23-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CDG62_18140 1fca1c1055abf09898cd0c083ac2ab60 113 Gene3D G3DSA:2.30.30.90 27 110 3.7E-23 T 23-10-2018 IPR038157 Ferrous iron transporter, core domain CDG62_18140 1fca1c1055abf09898cd0c083ac2ab60 113 SUPERFAMILY SSF50037 31 108 5.49E-13 T 23-10-2018 IPR008988 Transcriptional repressor, C-terminal CDG62_18140 1fca1c1055abf09898cd0c083ac2ab60 113 SMART SM00899 28 108 5.0E-18 T 23-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CDG62_00470 77bbcca8917aab617e5ad436d4d2b950 203 SUPERFAMILY SSF53041 4 153 2.49E-28 T 23-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 CDG62_00470 77bbcca8917aab617e5ad436d4d2b950 203 Pfam PF00239 Resolvase, N terminal domain 8 153 2.3E-25 T 23-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDG62_00470 77bbcca8917aab617e5ad436d4d2b950 203 Pfam PF02796 Helix-turn-helix domain of resolvase 161 199 3.5E-7 T 23-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CDG62_00470 77bbcca8917aab617e5ad436d4d2b950 203 ProSitePatterns PS00398 Site-specific recombinases signature 2. 65 77 - T 23-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CDG62_00470 77bbcca8917aab617e5ad436d4d2b950 203 ProSitePatterns PS00397 Site-specific recombinases active site. 9 17 - T 23-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CDG62_00470 77bbcca8917aab617e5ad436d4d2b950 203 SMART SM00857 6 157 7.8E-35 T 23-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDG62_00470 77bbcca8917aab617e5ad436d4d2b950 203 Gene3D G3DSA:3.40.50.1390 7 157 5.8E-29 T 23-10-2018 CDG62_02725 77bbcca8917aab617e5ad436d4d2b950 203 SUPERFAMILY SSF53041 4 153 2.49E-28 T 23-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 CDG62_02725 77bbcca8917aab617e5ad436d4d2b950 203 Pfam PF00239 Resolvase, N terminal domain 8 153 2.3E-25 T 23-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDG62_02725 77bbcca8917aab617e5ad436d4d2b950 203 Pfam PF02796 Helix-turn-helix domain of resolvase 161 199 3.5E-7 T 23-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CDG62_02725 77bbcca8917aab617e5ad436d4d2b950 203 ProSitePatterns PS00398 Site-specific recombinases signature 2. 65 77 - T 23-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CDG62_02725 77bbcca8917aab617e5ad436d4d2b950 203 ProSitePatterns PS00397 Site-specific recombinases active site. 9 17 - T 23-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CDG62_02725 77bbcca8917aab617e5ad436d4d2b950 203 SMART SM00857 6 157 7.8E-35 T 23-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDG62_02725 77bbcca8917aab617e5ad436d4d2b950 203 Gene3D G3DSA:3.40.50.1390 7 157 5.8E-29 T 23-10-2018 CDG62_06735 59c4fb170708015bc13980199295d96d 310 SMART SM00450 126 227 9.7E-22 T 23-10-2018 IPR001763 Rhodanese-like domain CDG62_06735 59c4fb170708015bc13980199295d96d 310 Pfam PF00581 Rhodanese-like domain 128 223 9.0E-12 T 23-10-2018 IPR001763 Rhodanese-like domain CDG62_06735 59c4fb170708015bc13980199295d96d 310 Gene3D G3DSA:3.30.70.100 9 110 2.8E-28 T 23-10-2018 CDG62_06735 59c4fb170708015bc13980199295d96d 310 Gene3D G3DSA:3.40.250.10 114 259 1.6E-50 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG62_06735 59c4fb170708015bc13980199295d96d 310 SUPERFAMILY SSF52821 122 254 5.08E-32 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG62_06735 59c4fb170708015bc13980199295d96d 310 Hamap MF_00469 UPF0176 protein YceA [yceA]. 17 267 42.786 T 23-10-2018 IPR020936 Uncharacterised protein family UPF0176 CDG62_05965 0eeaf74b1f03ad7aac93e04e8786e62e 336 Pfam PF00691 OmpA family 225 321 2.6E-23 T 23-10-2018 IPR006665 OmpA-like domain CDG62_05965 0eeaf74b1f03ad7aac93e04e8786e62e 336 Gene3D G3DSA:2.40.160.20 13 186 2.7E-18 T 23-10-2018 CDG62_05965 0eeaf74b1f03ad7aac93e04e8786e62e 336 Pfam PF13505 Outer membrane protein beta-barrel domain 7 184 1.2E-12 T 23-10-2018 IPR027385 Outer membrane protein beta-barrel CDG62_05965 0eeaf74b1f03ad7aac93e04e8786e62e 336 SUPERFAMILY SSF56925 30 191 3.4E-18 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG62_05965 0eeaf74b1f03ad7aac93e04e8786e62e 336 Gene3D G3DSA:3.30.1330.60 210 331 5.4E-44 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG62_05965 0eeaf74b1f03ad7aac93e04e8786e62e 336 PRINTS PR01021 OMPA domain signature 226 248 4.4E-10 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_05965 0eeaf74b1f03ad7aac93e04e8786e62e 336 PRINTS PR01021 OMPA domain signature 271 287 4.4E-10 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_05965 0eeaf74b1f03ad7aac93e04e8786e62e 336 PRINTS PR01021 OMPA domain signature 256 271 4.4E-10 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_05965 0eeaf74b1f03ad7aac93e04e8786e62e 336 SUPERFAMILY SSF103088 199 325 2.88E-34 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG62_14030 df089c560e7266c495c4954367026eba 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 281 34.889 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG62_14030 df089c560e7266c495c4954367026eba 282 SUPERFAMILY SSF53223 2 121 7.67E-38 T 23-10-2018 CDG62_14030 df089c560e7266c495c4954367026eba 282 Gene3D G3DSA:3.40.50.10860 7 275 2.0E-101 T 23-10-2018 CDG62_14030 df089c560e7266c495c4954367026eba 282 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 258 266 - T 23-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG62_14030 df089c560e7266c495c4954367026eba 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 1.7E-38 T 23-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG62_14030 df089c560e7266c495c4954367026eba 282 Gene3D G3DSA:3.40.50.720 5 257 2.0E-101 T 23-10-2018 CDG62_14030 df089c560e7266c495c4954367026eba 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 127 280 1.7E-60 T 23-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG62_14030 df089c560e7266c495c4954367026eba 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 5.2E-62 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG62_14030 df089c560e7266c495c4954367026eba 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 5.2E-62 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG62_14030 df089c560e7266c495c4954367026eba 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 5.2E-62 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG62_14030 df089c560e7266c495c4954367026eba 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 5.2E-62 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG62_14030 df089c560e7266c495c4954367026eba 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 5.2E-62 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG62_14030 df089c560e7266c495c4954367026eba 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 5.2E-62 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG62_14030 df089c560e7266c495c4954367026eba 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 5.2E-62 T 23-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 CDG62_14030 df089c560e7266c495c4954367026eba 282 SUPERFAMILY SSF51735 127 278 1.7E-44 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_08035 1ca6eca45559409271eff1e177631301 235 SMART SM00100 9 132 1.4E-19 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain CDG62_08035 1ca6eca45559409271eff1e177631301 235 Pfam PF00027 Cyclic nucleotide-binding domain 33 120 7.7E-20 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain CDG62_08035 1ca6eca45559409271eff1e177631301 235 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 7.1E-9 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDG62_08035 1ca6eca45559409271eff1e177631301 235 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 7.1E-9 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDG62_08035 1ca6eca45559409271eff1e177631301 235 Gene3D G3DSA:2.60.120.10 21 148 1.3E-39 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG62_08035 1ca6eca45559409271eff1e177631301 235 SMART SM00419 170 218 1.4E-13 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDG62_08035 1ca6eca45559409271eff1e177631301 235 SUPERFAMILY SSF51206 20 147 1.96E-28 T 23-10-2018 IPR018490 Cyclic nucleotide-binding-like CDG62_08035 1ca6eca45559409271eff1e177631301 235 ProSitePatterns PS00042 Crp-type HTH domain signature. 178 201 - T 23-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CDG62_08035 1ca6eca45559409271eff1e177631301 235 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 81 99 - T 23-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site CDG62_08035 1ca6eca45559409271eff1e177631301 235 Pfam PF00325 Bacterial regulatory proteins, crp family 176 207 1.3E-14 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDG62_08035 1ca6eca45559409271eff1e177631301 235 Gene3D G3DSA:1.10.10.10 149 217 2.9E-32 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_08035 1ca6eca45559409271eff1e177631301 235 SUPERFAMILY SSF46785 149 218 6.75E-15 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_06190 38c9819ae7c8b151ac2af8e326093979 243 SUPERFAMILY SSF53067 3 112 4.86E-21 T 23-10-2018 CDG62_06190 38c9819ae7c8b151ac2af8e326093979 243 Gene3D G3DSA:3.30.420.490 120 228 2.8E-50 T 23-10-2018 CDG62_06190 38c9819ae7c8b151ac2af8e326093979 243 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 236 4.7E-25 T 23-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CDG62_06190 38c9819ae7c8b151ac2af8e326093979 243 SUPERFAMILY SSF53067 119 241 1.14E-25 T 23-10-2018 CDG62_06190 38c9819ae7c8b151ac2af8e326093979 243 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 243 18.776 T 23-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CDG62_06190 38c9819ae7c8b151ac2af8e326093979 243 Gene3D G3DSA:3.30.420.40 6 235 2.8E-50 T 23-10-2018 CDG62_06190 38c9819ae7c8b151ac2af8e326093979 243 Pfam PF03309 Type III pantothenate kinase 4 199 1.9E-42 T 23-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CDG62_08500 068a9fbf1c3ca6c72d5425c1203d42da 248 Gene3D G3DSA:3.40.50.300 9 248 3.1E-69 T 23-10-2018 CDG62_08500 068a9fbf1c3ca6c72d5425c1203d42da 248 SMART SM00382 35 220 4.2E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_08500 068a9fbf1c3ca6c72d5425c1203d42da 248 SUPERFAMILY SSF52540 11 243 1.42E-62 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_08500 068a9fbf1c3ca6c72d5425c1203d42da 248 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_08500 068a9fbf1c3ca6c72d5425c1203d42da 248 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 11 247 8.4E-120 T 23-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CDG62_08500 068a9fbf1c3ca6c72d5425c1203d42da 248 Pfam PF00005 ABC transporter 26 173 2.7E-34 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_08500 068a9fbf1c3ca6c72d5425c1203d42da 248 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 222 243 5.4E-9 T 23-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDG62_16115 eccfc3d6be7644f66962d1196a45b3a8 200 SUPERFAMILY SSF55811 23 177 3.66E-28 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG62_16115 eccfc3d6be7644f66962d1196a45b3a8 200 Pfam PF00293 NUDIX domain 25 136 1.1E-11 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG62_16115 eccfc3d6be7644f66962d1196a45b3a8 200 Gene3D G3DSA:3.90.79.10 2 180 7.0E-44 T 23-10-2018 CDG62_17940 1b318f1c8075a2dadc35f39e87888e5f 121 Gene3D G3DSA:1.20.5.710 2 50 6.4E-19 T 23-10-2018 CDG62_17940 1b318f1c8075a2dadc35f39e87888e5f 121 Gene3D G3DSA:3.30.1390.10 51 121 3.2E-32 T 23-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDG62_17940 1b318f1c8075a2dadc35f39e87888e5f 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 8.4E-32 T 23-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_17940 1b318f1c8075a2dadc35f39e87888e5f 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 93 3.0E-12 T 23-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_17940 1b318f1c8075a2dadc35f39e87888e5f 121 SUPERFAMILY SSF54736 50 121 2.44E-25 T 23-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDG62_17940 1b318f1c8075a2dadc35f39e87888e5f 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 24.327 T 23-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_17940 1b318f1c8075a2dadc35f39e87888e5f 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 5.3E-16 T 23-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_17940 1b318f1c8075a2dadc35f39e87888e5f 121 SUPERFAMILY SSF48300 4 57 1.96E-13 T 23-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_17940 1b318f1c8075a2dadc35f39e87888e5f 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 1.3E-45 T 23-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 1.0E-281 T 23-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 SUPERFAMILY SSF53067 2 182 8.2E-65 T 23-10-2018 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 Pfam PF00012 Hsp70 protein 4 603 3.9E-259 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 SUPERFAMILY SSF100920 384 539 1.44E-58 T 23-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.3E-76 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.3E-76 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.3E-76 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.3E-76 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.3E-76 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.3E-76 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.3E-76 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.3E-76 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.3E-76 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 Gene3D G3DSA:3.30.420.40 179 365 5.4E-164 T 23-10-2018 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 Gene3D G3DSA:3.90.640.10 228 315 5.4E-164 T 23-10-2018 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 Gene3D G3DSA:1.20.1270.10 523 601 9.6E-20 T 23-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 Gene3D G3DSA:2.60.34.10 382 522 1.7E-63 T 23-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 Gene3D G3DSA:3.30.420.40 5 378 5.4E-164 T 23-10-2018 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 SUPERFAMILY SSF53067 186 381 1.43E-66 T 23-10-2018 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 SUPERFAMILY SSF100934 534 609 3.69E-9 T 23-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 641 35.963 T 23-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 CDG62_02950 156458d8e8b0c73b66eaa15beae1e5b0 646 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDG62_13835 b7cc8c0f93a0380dbc3f951ca9d290ad 260 Pfam PF03746 LamB/YcsF family 3 240 1.9E-99 T 23-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 CDG62_13835 b7cc8c0f93a0380dbc3f951ca9d290ad 260 Gene3D G3DSA:3.20.20.370 1 253 2.5E-100 T 23-10-2018 CDG62_13835 b7cc8c0f93a0380dbc3f951ca9d290ad 260 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 245 44.197 T 23-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 CDG62_13835 b7cc8c0f93a0380dbc3f951ca9d290ad 260 SUPERFAMILY SSF88713 1 250 6.3E-100 T 23-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CDG62_05665 3c641115ebfb782bbb31363e3910bb43 274 SMART SM00849 31 261 6.8E-17 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_05665 3c641115ebfb782bbb31363e3910bb43 274 Pfam PF00753 Metallo-beta-lactamase superfamily 32 261 2.0E-17 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_05665 3c641115ebfb782bbb31363e3910bb43 274 SUPERFAMILY SSF56281 32 264 4.72E-31 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_05665 3c641115ebfb782bbb31363e3910bb43 274 Gene3D G3DSA:3.60.15.10 3 272 3.4E-51 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_03675 27d06d7f1b3bdba45cbf67021e5136a2 204 PIRSF PIRSF000498 1 204 2.0E-52 T 23-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_03675 27d06d7f1b3bdba45cbf67021e5136a2 204 Gene3D G3DSA:2.40.30.20 104 204 4.7E-24 T 23-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_03675 27d06d7f1b3bdba45cbf67021e5136a2 204 Gene3D G3DSA:2.40.30.20 1 91 3.6E-24 T 23-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_03675 27d06d7f1b3bdba45cbf67021e5136a2 204 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 1.1E-50 T 23-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_03675 27d06d7f1b3bdba45cbf67021e5136a2 204 SUPERFAMILY SSF63380 96 202 2.04E-25 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG62_03675 27d06d7f1b3bdba45cbf67021e5136a2 204 Pfam PF00677 Lumazine binding domain 3 88 3.9E-16 T 23-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_03675 27d06d7f1b3bdba45cbf67021e5136a2 204 Pfam PF00677 Lumazine binding domain 103 188 3.1E-18 T 23-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_03675 27d06d7f1b3bdba45cbf67021e5136a2 204 SUPERFAMILY SSF63380 1 92 3.32E-20 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG62_18275 a993c02dd5c21a76bcd3fef1b713edf2 256 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 29 233 2.9E-20 T 23-10-2018 IPR010239 Conserved hypothetical protein CHP02001 CDG62_18275 a993c02dd5c21a76bcd3fef1b713edf2 256 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 10 256 1.4E-25 T 23-10-2018 IPR010239 Conserved hypothetical protein CHP02001 CDG62_09220 99fa3f4e195d90baf94ec1e7994da624 490 Gene3D G3DSA:3.40.309.10 255 486 1.1E-78 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG62_09220 99fa3f4e195d90baf94ec1e7994da624 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 2.9E-222 T 23-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CDG62_09220 99fa3f4e195d90baf94ec1e7994da624 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDG62_09220 99fa3f4e195d90baf94ec1e7994da624 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDG62_09220 99fa3f4e195d90baf94ec1e7994da624 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 57.155 T 23-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CDG62_09220 99fa3f4e195d90baf94ec1e7994da624 490 SUPERFAMILY SSF53720 4 483 1.57E-170 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG62_09220 99fa3f4e195d90baf94ec1e7994da624 490 Gene3D G3DSA:3.40.605.10 3 254 6.2E-104 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG62_09220 99fa3f4e195d90baf94ec1e7994da624 490 Pfam PF00171 Aldehyde dehydrogenase family 19 479 3.4E-175 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG62_09310 e044c5d9c5ff9526f3c446c0b43223a0 512 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 5 511 2.4E-214 T 23-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CDG62_09310 e044c5d9c5ff9526f3c446c0b43223a0 512 Gene3D G3DSA:3.40.50.1100 50 146 2.5E-127 T 23-10-2018 CDG62_09310 e044c5d9c5ff9526f3c446c0b43223a0 512 SUPERFAMILY SSF55021 335 420 8.24E-24 T 23-10-2018 CDG62_09310 e044c5d9c5ff9526f3c446c0b43223a0 512 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 314 1.1E-74 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG62_09310 e044c5d9c5ff9526f3c446c0b43223a0 512 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 23-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CDG62_09310 e044c5d9c5ff9526f3c446c0b43223a0 512 SUPERFAMILY SSF55021 417 511 1.65E-23 T 23-10-2018 CDG62_09310 e044c5d9c5ff9526f3c446c0b43223a0 512 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 327 416 4.2E-22 T 23-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CDG62_09310 e044c5d9c5ff9526f3c446c0b43223a0 512 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 424 511 1.5E-22 T 23-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CDG62_09310 e044c5d9c5ff9526f3c446c0b43223a0 512 SUPERFAMILY SSF53686 6 363 5.37E-95 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG62_09310 e044c5d9c5ff9526f3c446c0b43223a0 512 Gene3D G3DSA:3.40.50.1100 14 325 2.5E-127 T 23-10-2018 CDG62_09310 e044c5d9c5ff9526f3c446c0b43223a0 512 Gene3D G3DSA:3.40.1020.10 336 512 3.2E-63 T 23-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CDG62_17455 9fe7a29951ab0f46b6cf87433d09ca87 279 Gene3D G3DSA:3.30.465.10 201 278 6.1E-20 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG62_17455 9fe7a29951ab0f46b6cf87433d09ca87 279 SUPERFAMILY SSF56176 204 278 6.27E-15 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG62_17455 9fe7a29951ab0f46b6cf87433d09ca87 279 Gene3D G3DSA:3.10.580.10 38 190 6.1E-52 T 23-10-2018 CDG62_17455 9fe7a29951ab0f46b6cf87433d09ca87 279 SUPERFAMILY SSF54631 55 191 7.9E-33 T 23-10-2018 CDG62_17455 9fe7a29951ab0f46b6cf87433d09ca87 279 SMART SM00116 131 179 12.0 T 23-10-2018 IPR000644 CBS domain CDG62_17455 9fe7a29951ab0f46b6cf87433d09ca87 279 SMART SM00116 67 117 0.17 T 23-10-2018 IPR000644 CBS domain CDG62_17455 9fe7a29951ab0f46b6cf87433d09ca87 279 Pfam PF00571 CBS domain 126 179 1.9E-6 T 23-10-2018 IPR000644 CBS domain CDG62_17455 9fe7a29951ab0f46b6cf87433d09ca87 279 Pfam PF00571 CBS domain 58 116 9.5E-7 T 23-10-2018 IPR000644 CBS domain CDG62_17455 9fe7a29951ab0f46b6cf87433d09ca87 279 SMART SM01091 201 279 2.4E-15 T 23-10-2018 IPR005170 Transporter-associated domain CDG62_17455 9fe7a29951ab0f46b6cf87433d09ca87 279 Pfam PF03471 Transporter associated domain 206 277 2.2E-16 T 23-10-2018 IPR005170 Transporter-associated domain CDG62_06405 d196a3e3d3f5ca247919d3d0dee9fd55 609 SUPERFAMILY SSF75304 7 450 1.44E-110 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG62_06405 d196a3e3d3f5ca247919d3d0dee9fd55 609 Gene3D G3DSA:3.90.1300.10 39 444 1.4E-161 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG62_06405 d196a3e3d3f5ca247919d3d0dee9fd55 609 Gene3D G3DSA:3.10.490.10 471 608 1.3E-50 T 23-10-2018 CDG62_06405 d196a3e3d3f5ca247919d3d0dee9fd55 609 Pfam PF01425 Amidase 50 440 7.1E-93 T 23-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG62_06405 d196a3e3d3f5ca247919d3d0dee9fd55 609 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 40 599 5.7E-241 T 23-10-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 CDG62_06405 d196a3e3d3f5ca247919d3d0dee9fd55 609 Gene3D G3DSA:1.20.58.1700 297 370 1.4E-161 T 23-10-2018 CDG62_04755 a6dc17a66200e8ce81ab3c70d2d44a9a 178 Pfam PF00281 Ribosomal protein L5 24 80 9.2E-27 T 23-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04755 a6dc17a66200e8ce81ab3c70d2d44a9a 178 SUPERFAMILY SSF55282 3 178 3.77E-77 T 23-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04755 a6dc17a66200e8ce81ab3c70d2d44a9a 178 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 23-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04755 a6dc17a66200e8ce81ab3c70d2d44a9a 178 PIRSF PIRSF002161 1 178 1.1E-66 T 23-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04755 a6dc17a66200e8ce81ab3c70d2d44a9a 178 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 178 42.06 T 23-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04755 a6dc17a66200e8ce81ab3c70d2d44a9a 178 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.8E-43 T 23-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04755 a6dc17a66200e8ce81ab3c70d2d44a9a 178 Gene3D G3DSA:3.30.1440.10 1 178 2.3E-78 T 23-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04890 1315daa79b265e32a86387c2e994639b 811 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 75 713 8.0E-192 T 23-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CDG62_04890 1315daa79b265e32a86387c2e994639b 811 SUPERFAMILY SSF50249 138 239 3.04E-11 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_04890 1315daa79b265e32a86387c2e994639b 811 Pfam PF00773 RNB domain 261 586 1.3E-105 T 23-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CDG62_04890 1315daa79b265e32a86387c2e994639b 811 SMART SM00955 261 587 9.4E-171 T 23-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 CDG62_04890 1315daa79b265e32a86387c2e994639b 811 SUPERFAMILY SSF50249 631 713 7.26E-19 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_04890 1315daa79b265e32a86387c2e994639b 811 SUPERFAMILY SSF50249 229 630 1.09E-138 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_04890 1315daa79b265e32a86387c2e994639b 811 Gene3D G3DSA:2.40.50.140 69 148 1.7E-9 T 23-10-2018 CDG62_04890 1315daa79b265e32a86387c2e994639b 811 SUPERFAMILY SSF50249 72 147 4.61E-10 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_04890 1315daa79b265e32a86387c2e994639b 811 ProSitePatterns PS01175 Ribonuclease II family signature. 554 578 - T 23-10-2018 IPR022966 Ribonuclease II/R, conserved site CDG62_04890 1315daa79b265e32a86387c2e994639b 811 Gene3D G3DSA:2.40.50.140 633 750 2.8E-20 T 23-10-2018 CDG62_04890 1315daa79b265e32a86387c2e994639b 811 Pfam PF08206 Ribonuclease B OB domain 89 139 1.8E-8 T 23-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain CDG62_04890 1315daa79b265e32a86387c2e994639b 811 TIGRFAM TIGR02063 RNase_R: ribonuclease R 21 713 2.6E-232 T 23-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CDG62_04890 1315daa79b265e32a86387c2e994639b 811 Pfam PF00575 S1 RNA binding domain 631 711 1.1E-9 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG62_04890 1315daa79b265e32a86387c2e994639b 811 Hamap MF_01895 Ribonuclease R [rnr]. 40 713 50.728 T 23-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CDG62_04890 1315daa79b265e32a86387c2e994639b 811 SMART SM00316 630 713 3.8E-10 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG62_03230 4404d66331fb0215066c4d136681733a 237 Gene3D G3DSA:1.10.3720.10 9 229 1.6E-42 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_03230 4404d66331fb0215066c4d136681733a 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 227 3.7E-15 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_03230 4404d66331fb0215066c4d136681733a 237 SUPERFAMILY SSF161098 17 217 3.92E-34 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_03230 4404d66331fb0215066c4d136681733a 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 122 4.3E-14 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CDG62_09640 ee7badabc847eb686198e8ea54268668 357 Pfam PF03864 Phage major capsid protein E 20 353 3.2E-44 T 23-10-2018 IPR005564 Major capsid protein GpE CDG62_09640 ee7badabc847eb686198e8ea54268668 357 Gene3D G3DSA:3.30.1930.10 176 298 4.3E-40 T 23-10-2018 CDG62_09640 ee7badabc847eb686198e8ea54268668 357 Gene3D G3DSA:3.15.30.10 38 345 4.3E-40 T 23-10-2018 CDG62_14635 4fc7708cbb47efc5f1cdcbaf1981d9d1 549 Gene3D G3DSA:1.20.1250.20 33 228 2.7E-18 T 23-10-2018 CDG62_14635 4fc7708cbb47efc5f1cdcbaf1981d9d1 549 Pfam PF07690 Major Facilitator Superfamily 44 439 5.3E-17 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_14635 4fc7708cbb47efc5f1cdcbaf1981d9d1 549 SUPERFAMILY SSF103473 26 449 2.49E-24 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_10325 299176dbc25075041dfdcfa1033d3349 147 PRINTS PR01438 Universal stress protein signature 124 146 4.4E-20 T 23-10-2018 IPR006015 Universal stress protein A CDG62_10325 299176dbc25075041dfdcfa1033d3349 147 PRINTS PR01438 Universal stress protein signature 106 118 4.4E-20 T 23-10-2018 IPR006015 Universal stress protein A CDG62_10325 299176dbc25075041dfdcfa1033d3349 147 PRINTS PR01438 Universal stress protein signature 3 21 4.4E-20 T 23-10-2018 IPR006015 Universal stress protein A CDG62_10325 299176dbc25075041dfdcfa1033d3349 147 SUPERFAMILY SSF52402 1 146 1.84E-38 T 23-10-2018 CDG62_10325 299176dbc25075041dfdcfa1033d3349 147 Gene3D G3DSA:3.40.50.620 1 146 2.2E-38 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_10325 299176dbc25075041dfdcfa1033d3349 147 Pfam PF00582 Universal stress protein family 3 146 1.8E-34 T 23-10-2018 IPR006016 UspA CDG62_10325 299176dbc25075041dfdcfa1033d3349 147 PIRSF PIRSF006276 1 147 8.7E-22 T 23-10-2018 IPR006015 Universal stress protein A CDG62_06610 480fe19e9d72b7ac663b02e8119fc4ec 325 SUPERFAMILY SSF48576 5 323 9.6E-94 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily CDG62_06610 480fe19e9d72b7ac663b02e8119fc4ec 325 Pfam PF00348 Polyprenyl synthetase 35 268 5.4E-72 T 23-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 CDG62_06610 480fe19e9d72b7ac663b02e8119fc4ec 325 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 99 - T 23-10-2018 IPR033749 Polyprenyl synthetase, conserved site CDG62_06610 480fe19e9d72b7ac663b02e8119fc4ec 325 Gene3D G3DSA:1.10.600.10 1 325 5.3E-106 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily CDG62_06610 480fe19e9d72b7ac663b02e8119fc4ec 325 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 206 218 - T 23-10-2018 IPR033749 Polyprenyl synthetase, conserved site CDG62_12110 3d9c630ecaff36cdf9464b77161368c9 355 SUPERFAMILY SSF54292 253 355 3.67E-17 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG62_12110 3d9c630ecaff36cdf9464b77161368c9 355 Gene3D G3DSA:3.10.20.30 267 355 8.5E-14 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG62_12110 3d9c630ecaff36cdf9464b77161368c9 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 232 240 9.0E-6 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_12110 3d9c630ecaff36cdf9464b77161368c9 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 87 94 9.0E-6 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_12110 3d9c630ecaff36cdf9464b77161368c9 355 PRINTS PR00410 Phenol hydroxylase reductase family signature 144 163 9.0E-6 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_12110 3d9c630ecaff36cdf9464b77161368c9 355 Pfam PF00175 Oxidoreductase NAD-binding domain 145 246 3.2E-13 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG62_12110 3d9c630ecaff36cdf9464b77161368c9 355 Gene3D G3DSA:3.40.50.80 135 266 1.2E-23 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_12110 3d9c630ecaff36cdf9464b77161368c9 355 SUPERFAMILY SSF63380 31 136 2.34E-18 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG62_12110 3d9c630ecaff36cdf9464b77161368c9 355 Pfam PF00970 Oxidoreductase FAD-binding domain 43 134 3.1E-9 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG62_12110 3d9c630ecaff36cdf9464b77161368c9 355 SUPERFAMILY SSF52343 123 252 4.06E-24 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_12110 3d9c630ecaff36cdf9464b77161368c9 355 Gene3D G3DSA:2.40.30.10 34 132 8.6E-16 T 23-10-2018 CDG62_08975 282b5bf3776778a63383a68e114a681c 493 Gene3D G3DSA:3.40.50.300 126 312 2.3E-67 T 23-10-2018 CDG62_08975 282b5bf3776778a63383a68e114a681c 493 SMART SM00448 4 115 6.9E-35 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_08975 282b5bf3776778a63383a68e114a681c 493 Gene3D G3DSA:1.10.10.60 393 480 1.2E-22 T 23-10-2018 CDG62_08975 282b5bf3776778a63383a68e114a681c 493 SUPERFAMILY SSF46689 405 480 2.9E-18 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_08975 282b5bf3776778a63383a68e114a681c 493 SUPERFAMILY SSF52172 1 187 7.12E-44 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_08975 282b5bf3776778a63383a68e114a681c 493 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 477 6.0E-224 T 23-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 CDG62_08975 282b5bf3776778a63383a68e114a681c 493 Gene3D G3DSA:1.10.8.60 313 392 3.3E-18 T 23-10-2018 CDG62_08975 282b5bf3776778a63383a68e114a681c 493 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 460 480 2.9E-10 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG62_08975 282b5bf3776778a63383a68e114a681c 493 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 460 2.9E-10 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG62_08975 282b5bf3776778a63383a68e114a681c 493 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 23-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDG62_08975 282b5bf3776778a63383a68e114a681c 493 Pfam PF02954 Bacterial regulatory protein, Fis family 439 477 7.5E-15 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG62_08975 282b5bf3776778a63383a68e114a681c 493 Pfam PF00158 Sigma-54 interaction domain 142 309 1.8E-71 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDG62_08975 282b5bf3776778a63383a68e114a681c 493 Pfam PF00072 Response regulator receiver domain 6 115 3.3E-29 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_08975 282b5bf3776778a63383a68e114a681c 493 SMART SM00382 162 305 1.2E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_08975 282b5bf3776778a63383a68e114a681c 493 SUPERFAMILY SSF52540 141 385 4.85E-72 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_08975 282b5bf3776778a63383a68e114a681c 493 Gene3D G3DSA:3.40.50.2300 1 124 4.4E-39 T 23-10-2018 CDG62_08975 282b5bf3776778a63383a68e114a681c 493 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 Gene3D G3DSA:3.30.300.10 403 522 4.6E-49 T 23-10-2018 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 SUPERFAMILY SSF54810 402 522 6.8E-48 T 23-10-2018 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 Pfam PF00117 Glutamine amidotransferase class-I 14 196 3.6E-40 T 23-10-2018 IPR017926 Glutamine amidotransferase CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 Gene3D G3DSA:3.40.50.880 11 203 2.0E-53 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 522 2.1E-145 T 23-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 Pfam PF02540 NAD synthase 217 291 3.2E-8 T 23-10-2018 IPR022310 NAD/GMP synthase CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 SUPERFAMILY SSF52402 194 417 2.09E-58 T 23-10-2018 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 SUPERFAMILY SSF52317 8 234 5.16E-58 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 56 65 3.5E-7 T 23-10-2018 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 83 94 3.5E-7 T 23-10-2018 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 3.5E-7 T 23-10-2018 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 53 67 2.7E-5 T 23-10-2018 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 83 99 2.7E-5 T 23-10-2018 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 12 26 2.7E-5 T 23-10-2018 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 Gene3D G3DSA:3.40.50.620 205 402 3.8E-75 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 Pfam PF00958 GMP synthase C terminal domain 430 521 2.2E-40 T 23-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 12 201 7.8E-79 T 23-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 9 522 55.282 T 23-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 PRINTS PR00097 Anthranilate synthase component II signature 56 65 5.8E-6 T 23-10-2018 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 PRINTS PR00097 Anthranilate synthase component II signature 83 94 5.8E-6 T 23-10-2018 CDG62_18640 17e3ddd968f897619916cd6dca5ca2e4 522 PRINTS PR00097 Anthranilate synthase component II signature 174 187 5.8E-6 T 23-10-2018 CDG62_10180 82d4b1c52bc7d8e1502c5bb81b987aa6 133 Pfam PF02501 Type II secretion system (T2SS), protein I 48 107 6.4E-8 T 23-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 CDG62_10180 82d4b1c52bc7d8e1502c5bb81b987aa6 133 Gene3D G3DSA:3.30.1300.30 39 126 3.5E-9 T 23-10-2018 CDG62_10180 82d4b1c52bc7d8e1502c5bb81b987aa6 133 SUPERFAMILY SSF54523 48 125 1.33E-10 T 23-10-2018 CDG62_10180 82d4b1c52bc7d8e1502c5bb81b987aa6 133 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_10180 82d4b1c52bc7d8e1502c5bb81b987aa6 133 TIGRFAM TIGR01707 gspI: type II secretion system protein I 11 106 2.2E-12 T 23-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 CDG62_10180 82d4b1c52bc7d8e1502c5bb81b987aa6 133 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 31 1.6E-7 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_10180 82d4b1c52bc7d8e1502c5bb81b987aa6 133 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 31 3.5E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_01790 cd6e68f26ea055ed7761d147e5ad9326 429 Pfam PF11799 impB/mucB/samB family C-terminal domain 249 362 7.7E-12 T 23-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG62_01790 cd6e68f26ea055ed7761d147e5ad9326 429 Pfam PF13438 Domain of unknown function (DUF4113) 378 419 1.0E-5 T 23-10-2018 IPR025188 Domain of unknown function DUF4113 CDG62_01790 cd6e68f26ea055ed7761d147e5ad9326 429 Pfam PF00817 impB/mucB/samB family 9 156 1.3E-26 T 23-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG62_01790 cd6e68f26ea055ed7761d147e5ad9326 429 Gene3D G3DSA:2.30.40.20 14 77 9.3E-33 T 23-10-2018 CDG62_01790 cd6e68f26ea055ed7761d147e5ad9326 429 Gene3D G3DSA:1.10.150.20 178 236 9.8E-10 T 23-10-2018 CDG62_01790 cd6e68f26ea055ed7761d147e5ad9326 429 Gene3D G3DSA:3.30.70.270 7 162 9.3E-33 T 23-10-2018 CDG62_01790 cd6e68f26ea055ed7761d147e5ad9326 429 SUPERFAMILY SSF56672 4 244 9.78E-55 T 23-10-2018 CDG62_01790 cd6e68f26ea055ed7761d147e5ad9326 429 Pfam PF11798 IMS family HHH motif 178 207 9.6E-7 T 23-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CDG62_04365 78b3c1858753bc88d45bdb9a9352b7bc 301 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 245 299 3.6E-8 T 23-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_04365 78b3c1858753bc88d45bdb9a9352b7bc 301 SUPERFAMILY SSF55120 12 240 3.74E-77 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_04365 78b3c1858753bc88d45bdb9a9352b7bc 301 Gene3D G3DSA:3.30.2350.10 4 244 1.4E-85 T 23-10-2018 CDG62_04365 78b3c1858753bc88d45bdb9a9352b7bc 301 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 13 220 6.2E-72 T 23-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_04365 78b3c1858753bc88d45bdb9a9352b7bc 301 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 13 299 18.353 T 23-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_04365 78b3c1858753bc88d45bdb9a9352b7bc 301 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 184 242 5.5E-9 T 23-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CDG62_04365 78b3c1858753bc88d45bdb9a9352b7bc 301 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 35 183 9.9E-58 T 23-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CDG62_10160 099edbc7e1b5994cf5ece897fd792ccc 113 Gene3D G3DSA:2.40.10.220 2 113 9.5E-35 T 23-10-2018 CDG62_10160 099edbc7e1b5994cf5ece897fd792ccc 113 Pfam PF07238 PilZ domain 10 83 2.1E-7 T 23-10-2018 IPR009875 PilZ domain GO:0035438 CDG62_04390 957dc07f018d0b64c555214c0112ec5c 410 Gene3D G3DSA:3.40.50.720 110 298 6.7E-105 T 23-10-2018 CDG62_04390 957dc07f018d0b64c555214c0112ec5c 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 201 223 - T 23-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDG62_04390 957dc07f018d0b64c555214c0112ec5c 410 SUPERFAMILY SSF51735 109 296 5.71E-56 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_04390 957dc07f018d0b64c555214c0112ec5c 410 Gene3D G3DSA:3.30.70.260 329 409 3.1E-31 T 23-10-2018 CDG62_04390 957dc07f018d0b64c555214c0112ec5c 410 SUPERFAMILY SSF52283 9 137 1.17E-48 T 23-10-2018 CDG62_04390 957dc07f018d0b64c555214c0112ec5c 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 327 4.2E-34 T 23-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CDG62_04390 957dc07f018d0b64c555214c0112ec5c 410 Gene3D G3DSA:3.40.50.720 15 313 6.7E-105 T 23-10-2018 CDG62_04390 957dc07f018d0b64c555214c0112ec5c 410 SUPERFAMILY SSF55021 333 409 7.28E-20 T 23-10-2018 CDG62_04390 957dc07f018d0b64c555214c0112ec5c 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 155 182 - T 23-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDG62_04390 957dc07f018d0b64c555214c0112ec5c 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 120 295 3.0E-51 T 23-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CDG62_09850 06e5545e1479ef125d864c7156a7dd70 925 Pfam PF05193 Peptidase M16 inactive domain 200 372 1.6E-15 T 23-10-2018 IPR007863 Peptidase M16, C-terminal CDG62_09850 06e5545e1479ef125d864c7156a7dd70 925 Pfam PF05193 Peptidase M16 inactive domain 670 847 8.1E-22 T 23-10-2018 IPR007863 Peptidase M16, C-terminal CDG62_09850 06e5545e1479ef125d864c7156a7dd70 925 Gene3D G3DSA:3.30.830.10 29 251 1.1E-56 T 23-10-2018 CDG62_09850 06e5545e1479ef125d864c7156a7dd70 925 SUPERFAMILY SSF63411 291 455 4.5E-13 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG62_09850 06e5545e1479ef125d864c7156a7dd70 925 Pfam PF00675 Insulinase (Peptidase family M16) 46 188 2.1E-19 T 23-10-2018 IPR011765 Peptidase M16, N-terminal CDG62_09850 06e5545e1479ef125d864c7156a7dd70 925 SUPERFAMILY SSF63411 751 923 6.83E-27 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG62_09850 06e5545e1479ef125d864c7156a7dd70 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 65 88 - T 23-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CDG62_09850 06e5545e1479ef125d864c7156a7dd70 925 SUPERFAMILY SSF63411 31 253 6.17E-52 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG62_09850 06e5545e1479ef125d864c7156a7dd70 925 Gene3D G3DSA:3.30.830.10 501 715 5.0E-22 T 23-10-2018 CDG62_09850 06e5545e1479ef125d864c7156a7dd70 925 Gene3D G3DSA:3.30.830.10 728 916 3.0E-34 T 23-10-2018 CDG62_09850 06e5545e1479ef125d864c7156a7dd70 925 Gene3D G3DSA:3.30.830.10 280 457 1.4E-20 T 23-10-2018 CDG62_09850 06e5545e1479ef125d864c7156a7dd70 925 SUPERFAMILY SSF63411 496 719 5.24E-27 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG62_00520 2fb291f0138e8b55a2fdac1de1131782 94 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 19 91 2.8E-30 T 23-10-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 CDG62_00520 2fb291f0138e8b55a2fdac1de1131782 94 SUPERFAMILY SSF160574 17 67 3.66E-5 T 23-10-2018 CDG62_14645 6a628c0c142933e3826722c59bf66483 289 Gene3D G3DSA:3.40.50.1100 18 283 2.2E-65 T 23-10-2018 CDG62_14645 6a628c0c142933e3826722c59bf66483 289 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 280 5.6E-22 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG62_14645 6a628c0c142933e3826722c59bf66483 289 Gene3D G3DSA:3.40.50.1100 36 141 2.2E-65 T 23-10-2018 CDG62_14645 6a628c0c142933e3826722c59bf66483 289 PIRSF PIRSF006278 3 289 2.0E-74 T 23-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CDG62_14645 6a628c0c142933e3826722c59bf66483 289 SUPERFAMILY SSF53686 16 287 3.6E-58 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG62_11300 c60daa71630a9c323875525b1b99cf39 332 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 315 2.8E-63 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG62_11300 c60daa71630a9c323875525b1b99cf39 332 TIGRFAM TIGR01136 cysKM: cysteine synthase 22 326 2.6E-124 T 23-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CDG62_11300 c60daa71630a9c323875525b1b99cf39 332 SUPERFAMILY SSF53686 18 325 1.83E-94 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG62_11300 c60daa71630a9c323875525b1b99cf39 332 TIGRFAM TIGR01139 cysK: cysteine synthase A 22 326 2.7E-129 T 23-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CDG62_11300 c60daa71630a9c323875525b1b99cf39 332 Gene3D G3DSA:3.40.50.1100 25 321 5.2E-120 T 23-10-2018 CDG62_11300 c60daa71630a9c323875525b1b99cf39 332 Gene3D G3DSA:3.40.50.1100 58 160 5.2E-120 T 23-10-2018 CDG62_11300 c60daa71630a9c323875525b1b99cf39 332 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 46 64 - T 23-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CDG62_13165 6073734b20b5c5e0b6ef2c95bd0ba4a2 227 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_13165 6073734b20b5c5e0b6ef2c95bd0ba4a2 227 Pfam PF00005 ABC transporter 26 174 2.8E-31 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_13165 6073734b20b5c5e0b6ef2c95bd0ba4a2 227 SMART SM00382 34 223 1.3E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_13165 6073734b20b5c5e0b6ef2c95bd0ba4a2 227 SUPERFAMILY SSF52540 5 226 6.49E-69 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_13165 6073734b20b5c5e0b6ef2c95bd0ba4a2 227 Gene3D G3DSA:3.40.50.300 3 227 3.4E-66 T 23-10-2018 CDG62_13165 6073734b20b5c5e0b6ef2c95bd0ba4a2 227 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 223 5.1E-96 T 23-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 CDG62_10645 a88d9abb9c9537d9b1810466393e7f99 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.8E-19 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_10645 a88d9abb9c9537d9b1810466393e7f99 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.8E-19 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_10645 a88d9abb9c9537d9b1810466393e7f99 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.8E-19 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_10645 a88d9abb9c9537d9b1810466393e7f99 90 Gene3D G3DSA:4.10.520.10 1 90 4.5E-38 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDG62_10645 a88d9abb9c9537d9b1810466393e7f99 90 SUPERFAMILY SSF47729 1 89 2.06E-33 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDG62_10645 a88d9abb9c9537d9b1810466393e7f99 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 9.9E-35 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_10645 a88d9abb9c9537d9b1810466393e7f99 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CDG62_10645 a88d9abb9c9537d9b1810466393e7f99 90 SMART SM00411 1 90 1.9E-46 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_09145 2c02dc11b3dc21fdaa91a7280be35f78 365 Gene3D G3DSA:3.40.50.1820 89 360 2.5E-19 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_09145 2c02dc11b3dc21fdaa91a7280be35f78 365 Pfam PF12146 Serine aminopeptidase, S33 103 336 9.0E-7 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG62_09145 2c02dc11b3dc21fdaa91a7280be35f78 365 PIRSF PIRSF005211 1 365 5.3E-52 T 23-10-2018 IPR012020 AB hydrolase 4 family CDG62_09145 2c02dc11b3dc21fdaa91a7280be35f78 365 SUPERFAMILY SSF53474 83 358 1.99E-26 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 SUPERFAMILY SSF82693 135 329 3.66E-26 T 23-10-2018 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 SUPERFAMILY SSF82714 719 800 1.18E-17 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 Gene3D G3DSA:3.30.70.1430 38 811 0.0 T 23-10-2018 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1030 0.0 T 23-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 7.0E-96 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 7.0E-96 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 7.0E-96 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 7.0E-96 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 7.0E-96 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 7.0E-96 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 7.0E-96 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 7.0E-96 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 7.0E-96 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 Gene3D G3DSA:3.30.2090.10 715 803 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 SUPERFAMILY SSF82866 802 1021 4.45E-42 T 23-10-2018 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 Gene3D G3DSA:1.20.1640.10 8 511 0.0 T 23-10-2018 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 Gene3D G3DSA:3.30.70.1430 566 662 0.0 T 23-10-2018 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 SUPERFAMILY SSF82693 564 663 1.78E-23 T 23-10-2018 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 Gene3D G3DSA:1.20.1640.10 512 1016 0.0 T 23-10-2018 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 SUPERFAMILY SSF82866 296 497 1.57E-51 T 23-10-2018 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 SUPERFAMILY SSF82693 38 129 1.31E-23 T 23-10-2018 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 SUPERFAMILY SSF82714 183 272 1.7E-21 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 Pfam PF00873 AcrB/AcrD/AcrF family 1 1019 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 Gene3D G3DSA:3.30.70.1440 663 859 0.0 T 23-10-2018 CDG62_02700 1b178848fab3d9ea1ca7e3d39cc502ae 1035 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 23-10-2018 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 Gene3D G3DSA:1.10.420.20 192 400 1.1E-204 T 23-10-2018 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 SUPERFAMILY SSF48113 433 729 2.36E-105 T 23-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 Gene3D G3DSA:1.10.520.10 434 729 2.1E-143 T 23-10-2018 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 Gene3D G3DSA:1.10.520.10 23 433 1.1E-204 T 23-10-2018 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 Hamap MF_01961 Catalase-peroxidase [katG]. 5 730 38.871 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 PRINTS PR00458 Haem peroxidase superfamily signature 151 168 1.1E-13 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 PRINTS PR00458 Haem peroxidase superfamily signature 169 181 1.1E-13 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 PRINTS PR00458 Haem peroxidase superfamily signature 91 105 1.1E-13 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 PRINTS PR00458 Haem peroxidase superfamily signature 260 275 1.1E-13 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 PRINTS PR00458 Haem peroxidase superfamily signature 319 334 1.1E-13 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 19 729 0.0 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 Pfam PF00141 Peroxidase 75 398 7.1E-45 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 Pfam PF00141 Peroxidase 407 704 3.0E-37 T 23-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 SUPERFAMILY SSF48113 21 432 9.62E-141 T 23-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 27 49 5.9E-47 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 482 508 5.9E-47 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 68 93 5.9E-47 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 268 291 5.9E-47 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 53 66 5.9E-47 T 23-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 CDG62_17245 8f1ca01ffdc975235bbfa15cfa09231b 730 Gene3D G3DSA:1.10.420.10 584 705 2.1E-143 T 23-10-2018 CDG62_04330 50b92b795bffb37259d667d190eb9f48 85 SUPERFAMILY SSF54565 1 75 7.32E-28 T 23-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04330 50b92b795bffb37259d667d190eb9f48 85 Gene3D G3DSA:3.30.1320.10 1 82 5.4E-31 T 23-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04330 50b92b795bffb37259d667d190eb9f48 85 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.301 T 23-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04330 50b92b795bffb37259d667d190eb9f48 85 Pfam PF00886 Ribosomal protein S16 8 68 1.6E-24 T 23-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04330 50b92b795bffb37259d667d190eb9f48 85 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.0E-28 T 23-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04330 50b92b795bffb37259d667d190eb9f48 85 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 23-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_14650 aac1e2e95d6ab07dea30038fe467312a 399 Gene3D G3DSA:2.40.30.10 192 344 3.1E-118 T 23-10-2018 CDG62_14650 aac1e2e95d6ab07dea30038fe467312a 399 Pfam PF03486 HI0933-like protein 6 397 6.7E-137 T 23-10-2018 CDG62_14650 aac1e2e95d6ab07dea30038fe467312a 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 6.1E-8 T 23-10-2018 CDG62_14650 aac1e2e95d6ab07dea30038fe467312a 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 367 374 6.1E-8 T 23-10-2018 CDG62_14650 aac1e2e95d6ab07dea30038fe467312a 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 6.1E-8 T 23-10-2018 CDG62_14650 aac1e2e95d6ab07dea30038fe467312a 399 SUPERFAMILY SSF160996 194 343 6.54E-33 T 23-10-2018 CDG62_14650 aac1e2e95d6ab07dea30038fe467312a 399 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 396 1.7E-117 T 23-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CDG62_14650 aac1e2e95d6ab07dea30038fe467312a 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 3.2E-5 T 23-10-2018 CDG62_14650 aac1e2e95d6ab07dea30038fe467312a 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.2E-5 T 23-10-2018 CDG62_14650 aac1e2e95d6ab07dea30038fe467312a 399 Gene3D G3DSA:3.50.50.60 10 393 3.1E-118 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14650 aac1e2e95d6ab07dea30038fe467312a 399 Gene3D G3DSA:1.10.8.260 265 327 3.1E-118 T 23-10-2018 IPR023166 HI0933-like insert domain superfamily CDG62_14650 aac1e2e95d6ab07dea30038fe467312a 399 SUPERFAMILY SSF51905 4 399 2.28E-54 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_11375 6821a55111f153b128f3fd2e5b9bc98f 616 Pfam PF00664 ABC transporter transmembrane region 40 308 9.5E-14 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDG62_11375 6821a55111f153b128f3fd2e5b9bc98f 616 Pfam PF00005 ABC transporter 377 530 4.5E-35 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_11375 6821a55111f153b128f3fd2e5b9bc98f 616 SMART SM00382 385 576 1.9E-20 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_11375 6821a55111f153b128f3fd2e5b9bc98f 616 Gene3D G3DSA:1.20.1560.10 27 348 3.7E-25 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG62_11375 6821a55111f153b128f3fd2e5b9bc98f 616 SUPERFAMILY SSF52540 352 600 6.63E-88 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_11375 6821a55111f153b128f3fd2e5b9bc98f 616 ProSitePatterns PS00211 ABC transporters family signature. 502 516 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_11375 6821a55111f153b128f3fd2e5b9bc98f 616 Gene3D G3DSA:3.40.50.300 351 609 2.0E-90 T 23-10-2018 CDG62_11375 6821a55111f153b128f3fd2e5b9bc98f 616 SUPERFAMILY SSF90123 29 339 3.53E-45 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG62_05995 b085345f8f4d9e02f09757a1663abca9 109 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 107 1.2E-14 T 23-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like CDG62_05995 b085345f8f4d9e02f09757a1663abca9 109 SUPERFAMILY SSF110857 1 106 1.44E-15 T 23-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily CDG62_05995 b085345f8f4d9e02f09757a1663abca9 109 Gene3D G3DSA:3.10.490.10 1 109 3.4E-19 T 23-10-2018 CDG62_08370 e36be22968849331ff62ffc756d674aa 187 PIRSF PIRSF000239 1 187 2.5E-55 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG62_08370 e36be22968849331ff62ffc756d674aa 187 Gene3D G3DSA:3.40.30.10 1 186 6.4E-66 T 23-10-2018 CDG62_08370 e36be22968849331ff62ffc756d674aa 187 Pfam PF00578 AhpC/TSA family 6 132 8.7E-36 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG62_08370 e36be22968849331ff62ffc756d674aa 187 SUPERFAMILY SSF52833 3 186 5.62E-60 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_08370 e36be22968849331ff62ffc756d674aa 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 9.0E-105 T 23-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDG62_08370 e36be22968849331ff62ffc756d674aa 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 5.5E-6 T 23-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG62_07775 fda20a470c8f462edf574807a08b29f2 236 Pfam PF01980 Uncharacterised protein family UPF0066 21 146 5.1E-40 T 23-10-2018 IPR023370 YaeB-like, N-terminal domain CDG62_07775 fda20a470c8f462edf574807a08b29f2 236 Gene3D G3DSA:2.40.30.70 1 145 2.7E-46 T 23-10-2018 IPR036414 YaeB, N-terminal domain superfamily CDG62_07775 fda20a470c8f462edf574807a08b29f2 236 SUPERFAMILY SSF118196 2 232 1.06E-67 T 23-10-2018 IPR036413 YaeB-like superfamily CDG62_07775 fda20a470c8f462edf574807a08b29f2 236 Gene3D G3DSA:3.30.2310.10 146 234 3.2E-11 T 23-10-2018 CDG62_07775 fda20a470c8f462edf574807a08b29f2 236 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 3 152 5.7E-41 T 23-10-2018 IPR023370 YaeB-like, N-terminal domain CDG62_13525 aca156581e96738293fe935fa7c5b4ec 613 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 98 510 5.1E-65 T 23-10-2018 IPR000914 Solute-binding protein family 5 domain CDG62_13525 aca156581e96738293fe935fa7c5b4ec 613 Gene3D G3DSA:3.40.190.10 32 594 1.4E-208 T 23-10-2018 CDG62_13525 aca156581e96738293fe935fa7c5b4ec 613 Gene3D G3DSA:3.10.105.10 312 574 1.4E-208 T 23-10-2018 CDG62_13525 aca156581e96738293fe935fa7c5b4ec 613 SUPERFAMILY SSF53850 50 596 1.38E-102 T 23-10-2018 CDG62_13525 aca156581e96738293fe935fa7c5b4ec 613 PIRSF PIRSF002741 3 599 6.6E-86 T 23-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CDG62_04175 50da65eaa615c6c364f46fccfbb95a10 352 Gene3D G3DSA:3.30.420.40 188 315 7.9E-87 T 23-10-2018 CDG62_04175 50da65eaa615c6c364f46fccfbb95a10 352 Pfam PF11104 Type IV pilus assembly protein PilM; 14 351 1.2E-134 T 23-10-2018 IPR005883 Type IV pilus assembly protein PilM CDG62_04175 50da65eaa615c6c364f46fccfbb95a10 352 SUPERFAMILY SSF53067 193 350 1.71E-24 T 23-10-2018 CDG62_04175 50da65eaa615c6c364f46fccfbb95a10 352 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 12 351 1.5E-113 T 23-10-2018 IPR005883 Type IV pilus assembly protein PilM CDG62_04175 50da65eaa615c6c364f46fccfbb95a10 352 SMART SM00842 12 179 0.0013 T 23-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CDG62_04175 50da65eaa615c6c364f46fccfbb95a10 352 Gene3D G3DSA:3.30.420.40 13 349 7.9E-87 T 23-10-2018 CDG62_04175 50da65eaa615c6c364f46fccfbb95a10 352 Gene3D G3DSA:3.30.1490.300 88 147 7.9E-87 T 23-10-2018 CDG62_04175 50da65eaa615c6c364f46fccfbb95a10 352 SUPERFAMILY SSF53067 12 176 1.79E-11 T 23-10-2018 CDG62_04175 50da65eaa615c6c364f46fccfbb95a10 352 PIRSF PIRSF019169 2 352 1.6E-122 T 23-10-2018 IPR005883 Type IV pilus assembly protein PilM CDG62_12630 ce5f4116054aa3225d00789c39e8168b 712 Pfam PF07690 Major Facilitator Superfamily 26 411 9.0E-13 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_12630 ce5f4116054aa3225d00789c39e8168b 712 SUPERFAMILY SSF103473 13 410 8.24E-21 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_12630 ce5f4116054aa3225d00789c39e8168b 712 SUPERFAMILY SSF103473 614 707 5.1E-5 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_12630 ce5f4116054aa3225d00789c39e8168b 712 Gene3D G3DSA:2.60.40.10 399 472 3.4E-5 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG62_12630 ce5f4116054aa3225d00789c39e8168b 712 Gene3D G3DSA:2.60.40.10 481 588 1.7E-9 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG62_12630 ce5f4116054aa3225d00789c39e8168b 712 Gene3D G3DSA:1.20.1250.20 13 223 1.2E-8 T 23-10-2018 CDG62_13775 b063f2e53df082c3d1dd8ba731c6d8d4 613 Gene3D G3DSA:3.50.50.60 21 375 8.3E-79 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_13775 b063f2e53df082c3d1dd8ba731c6d8d4 613 Pfam PF01494 FAD binding domain 20 376 3.4E-60 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 CDG62_13775 b063f2e53df082c3d1dd8ba731c6d8d4 613 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 327 2.9E-34 T 23-10-2018 CDG62_13775 b063f2e53df082c3d1dd8ba731c6d8d4 613 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 363 379 2.9E-34 T 23-10-2018 CDG62_13775 b063f2e53df082c3d1dd8ba731c6d8d4 613 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 345 363 2.9E-34 T 23-10-2018 CDG62_13775 b063f2e53df082c3d1dd8ba731c6d8d4 613 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 187 202 2.9E-34 T 23-10-2018 CDG62_13775 b063f2e53df082c3d1dd8ba731c6d8d4 613 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 327 343 2.9E-34 T 23-10-2018 CDG62_13775 b063f2e53df082c3d1dd8ba731c6d8d4 613 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 21 43 2.9E-34 T 23-10-2018 CDG62_13775 b063f2e53df082c3d1dd8ba731c6d8d4 613 Gene3D G3DSA:3.30.70.2450 216 301 8.3E-79 T 23-10-2018 CDG62_13775 b063f2e53df082c3d1dd8ba731c6d8d4 613 SUPERFAMILY SSF51905 20 411 3.19E-57 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_07400 033508d99b0660044908b63c24e50965 453 PRINTS PR00175 Sodium/alanine symporter signature 353 375 3.4E-55 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_07400 033508d99b0660044908b63c24e50965 453 PRINTS PR00175 Sodium/alanine symporter signature 214 233 3.4E-55 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_07400 033508d99b0660044908b63c24e50965 453 PRINTS PR00175 Sodium/alanine symporter signature 95 117 3.4E-55 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_07400 033508d99b0660044908b63c24e50965 453 PRINTS PR00175 Sodium/alanine symporter signature 412 432 3.4E-55 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_07400 033508d99b0660044908b63c24e50965 453 PRINTS PR00175 Sodium/alanine symporter signature 186 204 3.4E-55 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_07400 033508d99b0660044908b63c24e50965 453 PRINTS PR00175 Sodium/alanine symporter signature 305 323 3.4E-55 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_07400 033508d99b0660044908b63c24e50965 453 TIGRFAM TIGR00835 agcS: amino acid carrier protein 18 443 7.9E-157 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_07400 033508d99b0660044908b63c24e50965 453 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 95 110 - T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_07400 033508d99b0660044908b63c24e50965 453 Pfam PF01235 Sodium:alanine symporter family 58 451 2.3E-154 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_05800 d192cfdc8a2453307fc2aa378cd061d6 217 SUPERFAMILY SSF52833 9 87 2.37E-14 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_05800 d192cfdc8a2453307fc2aa378cd061d6 217 Pfam PF00043 Glutathione S-transferase, C-terminal domain 115 196 5.9E-5 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal CDG62_05800 d192cfdc8a2453307fc2aa378cd061d6 217 SUPERFAMILY SSF47616 91 207 8.67E-16 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG62_05800 d192cfdc8a2453307fc2aa378cd061d6 217 Gene3D G3DSA:3.40.30.10 11 203 8.4E-57 T 23-10-2018 CDG62_05800 d192cfdc8a2453307fc2aa378cd061d6 217 Gene3D G3DSA:1.20.1050.10 87 195 8.4E-57 T 23-10-2018 CDG62_05800 d192cfdc8a2453307fc2aa378cd061d6 217 Pfam PF02798 Glutathione S-transferase, N-terminal domain 11 78 4.5E-13 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG62_06260 6fafa06e5ad462955ec7e209a7acc637 439 SUPERFAMILY SSF53383 13 431 7.32E-132 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_06260 6fafa06e5ad462955ec7e209a7acc637 439 Gene3D G3DSA:3.90.1150.10 19 424 3.2E-165 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_06260 6fafa06e5ad462955ec7e209a7acc637 439 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 10 434 49.79 T 23-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CDG62_06260 6fafa06e5ad462955ec7e209a7acc637 439 Pfam PF00202 Aminotransferase class-III 35 430 2.7E-129 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_06260 6fafa06e5ad462955ec7e209a7acc637 439 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_06260 6fafa06e5ad462955ec7e209a7acc637 439 PIRSF PIRSF000521 178 434 1.5E-23 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_06260 6fafa06e5ad462955ec7e209a7acc637 439 PIRSF PIRSF000521 33 160 1.8E-8 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_06260 6fafa06e5ad462955ec7e209a7acc637 439 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 22 431 4.1E-181 T 23-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CDG62_06260 6fafa06e5ad462955ec7e209a7acc637 439 Gene3D G3DSA:3.40.640.10 70 340 3.2E-165 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_13960 f8d9702760dd3a20b5b917e395b19b31 494 Pfam PF00884 Sulfatase 5 351 1.8E-62 T 23-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CDG62_13960 f8d9702760dd3a20b5b917e395b19b31 494 Gene3D G3DSA:3.30.1120.10 387 448 2.6E-100 T 23-10-2018 CDG62_13960 f8d9702760dd3a20b5b917e395b19b31 494 Pfam PF14707 C-terminal region of aryl-sulfatase 383 472 3.0E-11 T 23-10-2018 CDG62_13960 f8d9702760dd3a20b5b917e395b19b31 494 Gene3D G3DSA:3.40.720.10 5 385 2.6E-100 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG62_13960 f8d9702760dd3a20b5b917e395b19b31 494 SUPERFAMILY SSF53649 1 481 4.19E-114 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG62_14015 bbf662209aee9ca5eea2004dd754bba1 439 Gene3D G3DSA:1.20.1250.20 18 438 1.7E-66 T 23-10-2018 CDG62_14015 bbf662209aee9ca5eea2004dd754bba1 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_14015 bbf662209aee9ca5eea2004dd754bba1 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 131 156 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_14015 bbf662209aee9ca5eea2004dd754bba1 439 SUPERFAMILY SSF103473 18 432 1.12E-62 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_14015 bbf662209aee9ca5eea2004dd754bba1 439 Pfam PF00083 Sugar (and other) transporter 28 231 1.5E-29 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CDG62_13930 5d1907f609db2a408e07d79b7041d958 681 Gene3D G3DSA:3.30.1390.30 85 160 8.4E-48 T 23-10-2018 CDG62_13930 5d1907f609db2a408e07d79b7041d958 681 SUPERFAMILY SSF56601 250 605 8.91E-93 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG62_13930 5d1907f609db2a408e07d79b7041d958 681 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 605 3.5E-214 T 23-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG62_13930 5d1907f609db2a408e07d79b7041d958 681 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 3 609 49.702 T 23-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG62_13930 5d1907f609db2a408e07d79b7041d958 681 Gene3D G3DSA:3.90.1310.10 64 244 8.4E-48 T 23-10-2018 CDG62_13930 5d1907f609db2a408e07d79b7041d958 681 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 234 1.7E-47 T 23-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CDG62_13930 5d1907f609db2a408e07d79b7041d958 681 SUPERFAMILY SSF56519 56 249 2.35E-53 T 23-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CDG62_13930 5d1907f609db2a408e07d79b7041d958 681 Gene3D G3DSA:3.40.710.10 245 617 7.6E-96 T 23-10-2018 CDG62_13930 5d1907f609db2a408e07d79b7041d958 681 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 602 1.4E-68 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDG62_15840 438e89673000695922568c1bc29b0f72 299 PIRSF PIRSF000728 12 295 2.7E-109 T 23-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG62_15840 438e89673000695922568c1bc29b0f72 299 TIGRFAM TIGR00761 argB: acetylglutamate kinase 28 270 3.5E-80 T 23-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG62_15840 438e89673000695922568c1bc29b0f72 299 Pfam PF00696 Amino acid kinase family 27 272 3.8E-46 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDG62_15840 438e89673000695922568c1bc29b0f72 299 Hamap MF_00082 Acetylglutamate kinase [argB]. 26 288 50.517 T 23-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG62_15840 438e89673000695922568c1bc29b0f72 299 SUPERFAMILY SSF53633 6 295 1.06E-94 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG62_15840 438e89673000695922568c1bc29b0f72 299 Gene3D G3DSA:3.40.1160.10 4 299 6.3E-100 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG62_17955 1379f20e9334a444680880b20a3cf553 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.5E-65 T 23-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_17955 1379f20e9334a444680880b20a3cf553 142 Gene3D G3DSA:3.30.1550.10 2 72 5.9E-36 T 23-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CDG62_17955 1379f20e9334a444680880b20a3cf553 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 3.7E-23 T 23-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CDG62_17955 1379f20e9334a444680880b20a3cf553 142 SUPERFAMILY SSF54747 3 73 4.97E-31 T 23-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CDG62_17955 1379f20e9334a444680880b20a3cf553 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-16 T 23-10-2018 CDG62_17955 1379f20e9334a444680880b20a3cf553 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.078 T 23-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CDG62_17955 1379f20e9334a444680880b20a3cf553 142 SMART SM00649 9 141 3.9E-84 T 23-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CDG62_17955 1379f20e9334a444680880b20a3cf553 142 Gene3D G3DSA:1.10.10.250 73 141 8.9E-27 T 23-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CDG62_17955 1379f20e9334a444680880b20a3cf553 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 2.1E-31 T 23-10-2018 IPR020784 Ribosomal protein L11, N-terminal CDG62_17955 1379f20e9334a444680880b20a3cf553 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 141 - T 23-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_17955 1379f20e9334a444680880b20a3cf553 142 SUPERFAMILY SSF46906 68 141 4.45E-25 T 23-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CDG62_16610 e7a238e7417674adb7a4aba60ceb425a 730 SMART SM00950 405 710 2.3E-15 T 23-10-2018 IPR003165 Piwi domain GO:0003676 CDG62_16610 e7a238e7417674adb7a4aba60ceb425a 730 SUPERFAMILY SSF53098 290 729 7.33E-51 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_16610 e7a238e7417674adb7a4aba60ceb425a 730 Pfam PF02171 Piwi domain 427 627 4.4E-12 T 23-10-2018 IPR003165 Piwi domain GO:0003676 CDG62_16610 e7a238e7417674adb7a4aba60ceb425a 730 Gene3D G3DSA:3.40.50.2300 319 477 4.9E-8 T 23-10-2018 CDG62_16610 e7a238e7417674adb7a4aba60ceb425a 730 Gene3D G3DSA:3.30.420.10 478 730 1.8E-62 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_04730 4a4ae5e11ec650c9561f037d11f5ae4e 137 Gene3D G3DSA:3.90.1170.10 1 137 6.2E-55 T 23-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 CDG62_04730 4a4ae5e11ec650c9561f037d11f5ae4e 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.1E-47 T 23-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CDG62_04730 4a4ae5e11ec650c9561f037d11f5ae4e 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 36.626 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04730 4a4ae5e11ec650c9561f037d11f5ae4e 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.2E-56 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04730 4a4ae5e11ec650c9561f037d11f5ae4e 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 23-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04730 4a4ae5e11ec650c9561f037d11f5ae4e 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 5.9E-37 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04730 4a4ae5e11ec650c9561f037d11f5ae4e 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 5.9E-37 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04730 4a4ae5e11ec650c9561f037d11f5ae4e 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 5.9E-37 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04730 4a4ae5e11ec650c9561f037d11f5ae4e 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 5.9E-37 T 23-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04730 4a4ae5e11ec650c9561f037d11f5ae4e 137 SUPERFAMILY SSF54686 1 134 5.36E-54 T 23-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 CDG62_17250 2d2f58cae46ef104d566fa7d6e26a750 351 SUPERFAMILY SSF56281 96 314 2.36E-30 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_17250 2d2f58cae46ef104d566fa7d6e26a750 351 PIRSF PIRSF038896 2 350 3.1E-88 T 23-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 CDG62_17250 2d2f58cae46ef104d566fa7d6e26a750 351 Gene3D G3DSA:3.60.15.10 77 351 1.4E-72 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_17250 2d2f58cae46ef104d566fa7d6e26a750 351 Pfam PF12706 Beta-lactamase superfamily domain 115 309 1.3E-36 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_00275 6627298384f3f24d9dcf32d735e65419 324 Pfam PF01695 IstB-like ATP binding protein 144 283 2.1E-9 T 23-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CDG62_00275 6627298384f3f24d9dcf32d735e65419 324 SUPERFAMILY SSF52540 77 286 2.92E-13 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00275 6627298384f3f24d9dcf32d735e65419 324 Gene3D G3DSA:3.40.50.300 101 304 4.2E-30 T 23-10-2018 CDG62_08285 10ad3cae2d602287e8ad3ac9638a8552 322 Gene3D G3DSA:3.40.50.720 97 286 3.2E-103 T 23-10-2018 CDG62_08285 10ad3cae2d602287e8ad3ac9638a8552 322 SUPERFAMILY SSF51735 100 287 2.23E-53 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_08285 10ad3cae2d602287e8ad3ac9638a8552 322 SUPERFAMILY SSF52283 1 133 1.36E-26 T 23-10-2018 CDG62_08285 10ad3cae2d602287e8ad3ac9638a8552 322 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 318 5.9E-26 T 23-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CDG62_08285 10ad3cae2d602287e8ad3ac9638a8552 322 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 286 8.1E-57 T 23-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CDG62_08285 10ad3cae2d602287e8ad3ac9638a8552 322 Gene3D G3DSA:3.40.50.720 4 313 3.2E-103 T 23-10-2018 CDG62_08730 07276d496e81f5246b5f04353882a60b 255 Pfam PF14237 Domain of unknown function (DUF4339) 4 46 8.3E-17 T 23-10-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 CDG62_08730 07276d496e81f5246b5f04353882a60b 255 Pfam PF06271 RDD family 92 249 1.0E-21 T 23-10-2018 IPR010432 RDD CDG62_02910 1b3013646913e25483021188c9e545b4 645 Gene3D G3DSA:3.40.50.300 1 258 4.8E-55 T 23-10-2018 CDG62_02910 1b3013646913e25483021188c9e545b4 645 Gene3D G3DSA:3.40.50.300 274 530 1.2E-51 T 23-10-2018 CDG62_02910 1b3013646913e25483021188c9e545b4 645 Pfam PF12848 ABC transporter 216 294 6.2E-28 T 23-10-2018 IPR032781 ABC-transporter extension domain CDG62_02910 1b3013646913e25483021188c9e545b4 645 SMART SM00382 26 222 1.7E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_02910 1b3013646913e25483021188c9e545b4 645 SMART SM00382 336 503 8.3E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_02910 1b3013646913e25483021188c9e545b4 645 SUPERFAMILY SSF52540 294 514 4.86E-42 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_02910 1b3013646913e25483021188c9e545b4 645 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_02910 1b3013646913e25483021188c9e545b4 645 Pfam PF00005 ABC transporter 18 177 2.7E-21 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_02910 1b3013646913e25483021188c9e545b4 645 Pfam PF00005 ABC transporter 328 459 4.8E-19 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_02910 1b3013646913e25483021188c9e545b4 645 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_02910 1b3013646913e25483021188c9e545b4 645 SUPERFAMILY SSF52540 2 253 4.4E-45 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_14820 4479c9738dc37f5980d0c3e6c0301c6e 234 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 3 220 1.0E-118 T 23-10-2018 IPR014063 Arsenate resistance ArsH CDG62_14820 4479c9738dc37f5980d0c3e6c0301c6e 234 Gene3D G3DSA:3.40.50.360 1 234 2.3E-77 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_14820 4479c9738dc37f5980d0c3e6c0301c6e 234 Pfam PF03358 NADPH-dependent FMN reductase 28 170 4.1E-26 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CDG62_14820 4479c9738dc37f5980d0c3e6c0301c6e 234 SUPERFAMILY SSF52218 3 222 2.79E-63 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_06565 f9cf12f9a6bb1cae03a69de117be069d 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.0E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06565 f9cf12f9a6bb1cae03a69de117be069d 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.0E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06565 f9cf12f9a6bb1cae03a69de117be069d 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.0E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06565 f9cf12f9a6bb1cae03a69de117be069d 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.3E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06565 f9cf12f9a6bb1cae03a69de117be069d 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.3E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06565 f9cf12f9a6bb1cae03a69de117be069d 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.3E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06565 f9cf12f9a6bb1cae03a69de117be069d 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.3E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06565 f9cf12f9a6bb1cae03a69de117be069d 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.3E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06565 f9cf12f9a6bb1cae03a69de117be069d 268 Gene3D G3DSA:3.40.50.720 1 268 1.5E-63 T 23-10-2018 CDG62_06565 f9cf12f9a6bb1cae03a69de117be069d 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG62_06565 f9cf12f9a6bb1cae03a69de117be069d 268 Pfam PF00106 short chain dehydrogenase 10 195 1.4E-50 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06565 f9cf12f9a6bb1cae03a69de117be069d 268 SUPERFAMILY SSF51735 6 264 7.62E-61 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 608 624 7.9E-50 T 23-10-2018 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 739 757 7.9E-50 T 23-10-2018 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 686 705 7.9E-50 T 23-10-2018 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 368 387 7.9E-50 T 23-10-2018 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 716 735 7.9E-50 T 23-10-2018 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 TIGRFAM TIGR00763 lon: endopeptidase La 20 783 1.8E-280 T 23-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 Gene3D G3DSA:3.30.230.10 598 785 2.0E-75 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 689 697 - T 23-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 SMART SM00464 18 213 7.8E-61 T 23-10-2018 IPR003111 Lon, substrate-binding domain CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 SUPERFAMILY SSF52540 326 593 2.14E-50 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 Hamap MF_01973 Lon protease [lon]. 19 785 66.683 T 23-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 SMART SM00382 360 504 2.9E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 Gene3D G3DSA:1.10.8.60 503 597 2.7E-31 T 23-10-2018 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 Gene3D G3DSA:2.30.130.40 12 126 8.1E-28 T 23-10-2018 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 SUPERFAMILY SSF54211 608 783 3.15E-55 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 364 500 6.0E-20 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 Gene3D G3DSA:3.40.50.300 325 502 8.3E-63 T 23-10-2018 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 Gene3D G3DSA:1.20.58.1480 131 255 3.4E-24 T 23-10-2018 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 PIRSF PIRSF001174 6 788 0.0 T 23-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 18 211 1.4E-27 T 23-10-2018 IPR003111 Lon, substrate-binding domain CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 583 785 1.2E-85 T 23-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CDG62_13865 a060e995ed80e7e789a26227f3c8c238 809 SUPERFAMILY SSF88697 18 211 1.99E-28 T 23-10-2018 IPR015947 PUA-like superfamily CDG62_17370 50fea7ae62f16362eae51911377ce9b2 318 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 23-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDG62_17370 50fea7ae62f16362eae51911377ce9b2 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 2.6E-59 T 23-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CDG62_17370 50fea7ae62f16362eae51911377ce9b2 318 SUPERFAMILY SSF52283 1 122 9.26E-29 T 23-10-2018 CDG62_17370 50fea7ae62f16362eae51911377ce9b2 318 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 23-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDG62_17370 50fea7ae62f16362eae51911377ce9b2 318 SUPERFAMILY SSF51735 102 288 5.18E-56 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_17370 50fea7ae62f16362eae51911377ce9b2 318 Gene3D G3DSA:3.40.50.720 98 286 1.8E-117 T 23-10-2018 CDG62_17370 50fea7ae62f16362eae51911377ce9b2 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 23 317 1.1E-24 T 23-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CDG62_17370 50fea7ae62f16362eae51911377ce9b2 318 Gene3D G3DSA:3.40.50.720 16 315 1.8E-117 T 23-10-2018 CDG62_01695 81d7be81315abdcd8ff4c312a4df3e1d 179 Pfam PF01625 Peptide methionine sulfoxide reductase 5 151 2.7E-57 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_01695 81d7be81315abdcd8ff4c312a4df3e1d 179 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 151 5.8E-50 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_01695 81d7be81315abdcd8ff4c312a4df3e1d 179 SUPERFAMILY SSF55068 3 160 3.66E-64 T 23-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_01695 81d7be81315abdcd8ff4c312a4df3e1d 179 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 2 157 33.832 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_01695 81d7be81315abdcd8ff4c312a4df3e1d 179 Gene3D G3DSA:3.30.1060.10 2 168 1.3E-70 T 23-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 Gene3D G3DSA:3.30.390.30 352 477 8.0E-43 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 333 2.7E-69 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PIRSF PIRSF000350 1 469 3.2E-84 T 23-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 461 3.5E-35 T 23-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.2E-33 T 23-10-2018 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.2E-33 T 23-10-2018 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 1.2E-33 T 23-10-2018 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 1.2E-33 T 23-10-2018 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 1.2E-33 T 23-10-2018 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 45 55 - T 23-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 Gene3D G3DSA:3.50.50.60 5 340 9.4E-114 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 SUPERFAMILY SSF55424 348 471 2.06E-38 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 SUPERFAMILY SSF51905 1 343 1.64E-64 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 Gene3D G3DSA:3.50.50.60 162 283 9.4E-114 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 470 2.6E-158 T 23-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 2.2E-69 T 23-10-2018 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 2.2E-69 T 23-10-2018 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 2.2E-69 T 23-10-2018 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.2E-69 T 23-10-2018 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 44 59 2.2E-69 T 23-10-2018 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 2.2E-69 T 23-10-2018 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 2.2E-69 T 23-10-2018 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 2.2E-69 T 23-10-2018 CDG62_06945 9752d018dcff2385156ed31ea40f9b89 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 2.2E-69 T 23-10-2018 CDG62_15775 6f0ac6e5e59867311d6f3fd9b61dd6ac 325 SMART SM00267 138 314 1.7E-60 T 23-10-2018 IPR000160 GGDEF domain CDG62_15775 6f0ac6e5e59867311d6f3fd9b61dd6ac 325 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 145 314 5.3E-51 T 23-10-2018 IPR000160 GGDEF domain CDG62_15775 6f0ac6e5e59867311d6f3fd9b61dd6ac 325 Gene3D G3DSA:3.30.70.270 136 313 2.1E-53 T 23-10-2018 CDG62_15775 6f0ac6e5e59867311d6f3fd9b61dd6ac 325 SUPERFAMILY SSF55785 20 133 3.32E-16 T 23-10-2018 IPR035965 PAS domain superfamily CDG62_15775 6f0ac6e5e59867311d6f3fd9b61dd6ac 325 Pfam PF00990 Diguanylate cyclase, GGDEF domain 150 309 4.8E-48 T 23-10-2018 IPR000160 GGDEF domain CDG62_15775 6f0ac6e5e59867311d6f3fd9b61dd6ac 325 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 138 1.7E-10 T 23-10-2018 IPR000014 PAS domain CDG62_15775 6f0ac6e5e59867311d6f3fd9b61dd6ac 325 Pfam PF08447 PAS fold 40 125 5.8E-11 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 CDG62_15775 6f0ac6e5e59867311d6f3fd9b61dd6ac 325 SUPERFAMILY SSF55073 154 314 4.87E-45 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_15775 6f0ac6e5e59867311d6f3fd9b61dd6ac 325 Gene3D G3DSA:3.30.450.20 24 135 2.4E-24 T 23-10-2018 CDG62_15775 6f0ac6e5e59867311d6f3fd9b61dd6ac 325 SMART SM00086 89 131 7.7E-4 T 23-10-2018 IPR001610 PAC motif CDG62_06000 4c718250fccf88f7e45b78b915dcc994 94 SUPERFAMILY SSF54534 3 88 1.05E-25 T 23-10-2018 CDG62_06000 4c718250fccf88f7e45b78b915dcc994 94 Pfam PF00639 PPIC-type PPIASE domain 14 88 1.5E-19 T 23-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 CDG62_06000 4c718250fccf88f7e45b78b915dcc994 94 Gene3D G3DSA:3.10.50.40 1 91 3.1E-29 T 23-10-2018 CDG62_13280 59cdb42591ee28766f059e3211ef21f2 355 Pfam PF11890 Domain of unknown function (DUF3410) 300 349 7.5E-12 T 23-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 CDG62_13280 59cdb42591ee28766f059e3211ef21f2 355 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 23-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDG62_13280 59cdb42591ee28766f059e3211ef21f2 355 Gene3D G3DSA:3.40.50.720 92 254 1.3E-102 T 23-10-2018 CDG62_13280 59cdb42591ee28766f059e3211ef21f2 355 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 253 2.9E-36 T 23-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CDG62_13280 59cdb42591ee28766f059e3211ef21f2 355 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 195 211 - T 23-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDG62_13280 59cdb42591ee28766f059e3211ef21f2 355 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 24 276 9.6E-16 T 23-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CDG62_13280 59cdb42591ee28766f059e3211ef21f2 355 SUPERFAMILY SSF52283 30 106 8.08E-15 T 23-10-2018 CDG62_13280 59cdb42591ee28766f059e3211ef21f2 355 Gene3D G3DSA:3.40.50.720 2 272 1.3E-102 T 23-10-2018 CDG62_13280 59cdb42591ee28766f059e3211ef21f2 355 Gene3D G3DSA:3.30.1370.170 291 350 2.1E-10 T 23-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 CDG62_13280 59cdb42591ee28766f059e3211ef21f2 355 SUPERFAMILY SSF51735 91 254 2.96E-34 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_13280 59cdb42591ee28766f059e3211ef21f2 355 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 355 38.995 T 23-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 CDG62_01425 d7ab0a425fb1adf183da1c792c005290 278 SUPERFAMILY SSF52540 14 275 1.27E-37 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_01425 d7ab0a425fb1adf183da1c792c005290 278 Pfam PF13614 AAA domain 12 190 2.6E-42 T 23-10-2018 IPR025669 AAA domain CDG62_01425 d7ab0a425fb1adf183da1c792c005290 278 Gene3D G3DSA:3.40.50.300 1 278 5.0E-50 T 23-10-2018 CDG62_08915 d07e8af996a5553243aa5f77316f63d7 161 Pfam PF01037 Lrp/AsnC ligand binding domain 74 147 4.5E-26 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG62_08915 d07e8af996a5553243aa5f77316f63d7 161 Gene3D G3DSA:1.10.10.10 2 61 9.2E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_08915 d07e8af996a5553243aa5f77316f63d7 161 Gene3D G3DSA:3.30.70.920 62 145 9.3E-26 T 23-10-2018 CDG62_08915 d07e8af996a5553243aa5f77316f63d7 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 4.8E-17 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_08915 d07e8af996a5553243aa5f77316f63d7 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 4.8E-17 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_08915 d07e8af996a5553243aa5f77316f63d7 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 4.8E-17 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_08915 d07e8af996a5553243aa5f77316f63d7 161 SMART SM00344 8 117 3.0E-48 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG62_08915 d07e8af996a5553243aa5f77316f63d7 161 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 55 1.3E-19 T 23-10-2018 CDG62_08915 d07e8af996a5553243aa5f77316f63d7 161 SUPERFAMILY SSF54909 72 150 1.11E-20 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_08915 d07e8af996a5553243aa5f77316f63d7 161 SUPERFAMILY SSF46785 6 67 1.39E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_06340 123f9371a4dc29e6f2fab294d7568e23 195 PIRSF PIRSF019345 3 195 2.8E-53 T 23-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CDG62_06340 123f9371a4dc29e6f2fab294d7568e23 195 Pfam PF04079 Segregation and condensation complex subunit ScpB 20 178 2.2E-47 T 23-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CDG62_06340 123f9371a4dc29e6f2fab294d7568e23 195 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 20 183 1.2E-31 T 23-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CDG62_06340 123f9371a4dc29e6f2fab294d7568e23 195 Gene3D G3DSA:1.10.10.10 10 90 4.3E-14 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_06340 123f9371a4dc29e6f2fab294d7568e23 195 SUPERFAMILY SSF46785 12 91 9.07E-14 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_06340 123f9371a4dc29e6f2fab294d7568e23 195 Gene3D G3DSA:1.10.10.10 91 187 1.9E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_06340 123f9371a4dc29e6f2fab294d7568e23 195 SUPERFAMILY SSF46785 94 169 4.08E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00905 285ed34de1e34401121b61c709f5992d 270 SUPERFAMILY SSF56281 51 261 7.58E-31 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_00905 285ed34de1e34401121b61c709f5992d 270 SMART SM00849 74 250 2.4E-13 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_00905 285ed34de1e34401121b61c709f5992d 270 Pfam PF00753 Metallo-beta-lactamase superfamily 72 232 5.4E-9 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_00905 285ed34de1e34401121b61c709f5992d 270 Gene3D G3DSA:3.60.15.10 29 270 2.6E-97 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_12450 285ed34de1e34401121b61c709f5992d 270 SUPERFAMILY SSF56281 51 261 7.58E-31 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_12450 285ed34de1e34401121b61c709f5992d 270 SMART SM00849 74 250 2.4E-13 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_12450 285ed34de1e34401121b61c709f5992d 270 Pfam PF00753 Metallo-beta-lactamase superfamily 72 232 5.4E-9 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_12450 285ed34de1e34401121b61c709f5992d 270 Gene3D G3DSA:3.60.15.10 29 270 2.6E-97 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_05310 f93d47f5872e407679bdf4aba05ddf8f 411 SUPERFAMILY SSF102114 135 356 1.07E-16 T 23-10-2018 CDG62_05310 f93d47f5872e407679bdf4aba05ddf8f 411 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 30 388 75.417 T 23-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 CDG62_05310 f93d47f5872e407679bdf4aba05ddf8f 411 PIRSF PIRSF006004 23 402 2.0E-147 T 23-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 CDG62_05310 f93d47f5872e407679bdf4aba05ddf8f 411 Gene3D G3DSA:1.10.150.530 30 91 1.1E-25 T 23-10-2018 CDG62_05310 f93d47f5872e407679bdf4aba05ddf8f 411 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 29 393 3.4E-143 T 23-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 CDG62_05310 f93d47f5872e407679bdf4aba05ddf8f 411 Gene3D G3DSA:3.20.20.70 92 373 1.4E-107 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_05310 f93d47f5872e407679bdf4aba05ddf8f 411 SMART SM00729 135 360 0.0067 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG62_05310 f93d47f5872e407679bdf4aba05ddf8f 411 Pfam PF04055 Radical SAM superfamily 140 317 8.9E-17 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG62_11810 6717691e83430f1bdc19244c37aaf5b9 162 SUPERFAMILY SSF69765 4 159 1.83E-64 T 23-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDG62_11810 6717691e83430f1bdc19244c37aaf5b9 162 Pfam PF02542 YgbB family 5 158 3.6E-66 T 23-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDG62_11810 6717691e83430f1bdc19244c37aaf5b9 162 Gene3D G3DSA:3.30.1330.50 2 162 4.6E-67 T 23-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDG62_11810 6717691e83430f1bdc19244c37aaf5b9 162 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 159 1.4E-67 T 23-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDG62_11810 6717691e83430f1bdc19244c37aaf5b9 162 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 23-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDG62_11810 6717691e83430f1bdc19244c37aaf5b9 162 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 160 35.847 T 23-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CDG62_17320 fb2fb92e34aac1d7ab9a5e7687cbf040 365 Pfam PF04982 HPP family 54 173 9.1E-39 T 23-10-2018 IPR007065 HPP CDG62_17320 fb2fb92e34aac1d7ab9a5e7687cbf040 365 Gene3D G3DSA:3.10.580.10 201 294 1.0E-8 T 23-10-2018 CDG62_17320 fb2fb92e34aac1d7ab9a5e7687cbf040 365 Pfam PF00571 CBS domain 305 358 3.9E-10 T 23-10-2018 IPR000644 CBS domain CDG62_17320 fb2fb92e34aac1d7ab9a5e7687cbf040 365 Pfam PF00571 CBS domain 239 289 4.8E-5 T 23-10-2018 IPR000644 CBS domain CDG62_17320 fb2fb92e34aac1d7ab9a5e7687cbf040 365 SUPERFAMILY SSF54631 229 359 1.09E-24 T 23-10-2018 CDG62_17320 fb2fb92e34aac1d7ab9a5e7687cbf040 365 Gene3D G3DSA:3.10.580.10 295 362 2.8E-13 T 23-10-2018 CDG62_17320 fb2fb92e34aac1d7ab9a5e7687cbf040 365 SMART SM00116 312 359 5.5E-8 T 23-10-2018 IPR000644 CBS domain CDG62_17320 fb2fb92e34aac1d7ab9a5e7687cbf040 365 SMART SM00116 244 292 2.5 T 23-10-2018 IPR000644 CBS domain CDG62_05655 0ff0b57ad3d6d9b953ca3f2d92625bb4 335 Pfam PF05036 Sporulation related domain 254 327 3.9E-16 T 23-10-2018 IPR007730 Sporulation-like domain GO:0042834 CDG62_05655 0ff0b57ad3d6d9b953ca3f2d92625bb4 335 Gene3D G3DSA:3.30.70.1070 256 327 8.6E-8 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDG62_05655 0ff0b57ad3d6d9b953ca3f2d92625bb4 335 SUPERFAMILY SSF110997 253 327 4.32E-14 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDG62_07550 40d1c3fb0a5109422129ce8fec4b86d3 202 Pfam PF03330 Lytic transglycolase 105 193 9.2E-27 T 23-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CDG62_07550 40d1c3fb0a5109422129ce8fec4b86d3 202 SUPERFAMILY SSF50685 105 197 1.5E-14 T 23-10-2018 IPR036908 RlpA-like domain superfamily CDG62_07550 40d1c3fb0a5109422129ce8fec4b86d3 202 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 107 198 2.0E-42 T 23-10-2018 IPR012997 Rare lipoprotein A CDG62_07550 40d1c3fb0a5109422129ce8fec4b86d3 202 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 3 197 24.664 T 23-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 CDG62_07550 40d1c3fb0a5109422129ce8fec4b86d3 202 Gene3D G3DSA:2.40.40.10 104 198 5.9E-40 T 23-10-2018 IPR036908 RlpA-like domain superfamily CDG62_11935 b177ba8abb773e7cec5f49cac1799609 401 Pfam PF02222 ATP-grasp domain 125 303 1.7E-49 T 23-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CDG62_11935 b177ba8abb773e7cec5f49cac1799609 401 SUPERFAMILY SSF51246 328 398 4.39E-17 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDG62_11935 b177ba8abb773e7cec5f49cac1799609 401 SUPERFAMILY SSF56059 115 321 4.95E-54 T 23-10-2018 CDG62_11935 b177ba8abb773e7cec5f49cac1799609 401 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 15 398 8.7E-166 T 23-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CDG62_11935 b177ba8abb773e7cec5f49cac1799609 401 Gene3D G3DSA:3.30.470.20 199 401 1.6E-58 T 23-10-2018 CDG62_11935 b177ba8abb773e7cec5f49cac1799609 401 SUPERFAMILY SSF52440 4 114 7.19E-30 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG62_11935 b177ba8abb773e7cec5f49cac1799609 401 Gene3D G3DSA:3.30.1490.20 125 198 7.4E-31 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDG62_11935 b177ba8abb773e7cec5f49cac1799609 401 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 9 399 50.141 T 23-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CDG62_11935 b177ba8abb773e7cec5f49cac1799609 401 Gene3D G3DSA:3.40.50.20 3 124 4.6E-49 T 23-10-2018 CDG62_17800 e174d30841bf2d8bad65265e04d3ae0f 135 Pfam PF06713 Bacterial PH domain 60 134 9.0E-18 T 23-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 CDG62_15215 ded95dd280c832ae02e61eaf10dcfc1a 405 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 403 2.2E-218 T 23-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 CDG62_15215 ded95dd280c832ae02e61eaf10dcfc1a 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.815 T 23-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CDG62_15215 ded95dd280c832ae02e61eaf10dcfc1a 405 Pfam PF00202 Aminotransferase class-III 25 399 1.4E-124 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_15215 ded95dd280c832ae02e61eaf10dcfc1a 405 Gene3D G3DSA:3.90.1150.10 24 393 6.9E-152 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_15215 ded95dd280c832ae02e61eaf10dcfc1a 405 Gene3D G3DSA:3.40.640.10 59 304 6.9E-152 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_15215 ded95dd280c832ae02e61eaf10dcfc1a 405 PIRSF PIRSF000521 124 159 0.12 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_15215 ded95dd280c832ae02e61eaf10dcfc1a 405 PIRSF PIRSF000521 26 122 6.5E-4 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_15215 ded95dd280c832ae02e61eaf10dcfc1a 405 PIRSF PIRSF000521 171 402 1.4E-39 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_15215 ded95dd280c832ae02e61eaf10dcfc1a 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 399 5.7E-154 T 23-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CDG62_15215 ded95dd280c832ae02e61eaf10dcfc1a 405 SUPERFAMILY SSF53383 13 399 3.54E-127 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_15215 ded95dd280c832ae02e61eaf10dcfc1a 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_12795 b766d3781c8a0d276e4bb284e706408d 289 SUPERFAMILY SSF103481 52 133 6.67E-7 T 23-10-2018 CDG62_12795 b766d3781c8a0d276e4bb284e706408d 289 Pfam PF00892 EamA-like transporter family 142 269 7.9E-12 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_12795 b766d3781c8a0d276e4bb284e706408d 289 SUPERFAMILY SSF103481 173 273 4.32E-11 T 23-10-2018 CDG62_18855 bb3806f9ce187e41ddc2a4406feb09fb 557 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 503 520 - T 23-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_18855 bb3806f9ce187e41ddc2a4406feb09fb 557 Gene3D G3DSA:3.40.50.10490 19 512 9.8E-204 T 23-10-2018 CDG62_18855 bb3806f9ce187e41ddc2a4406feb09fb 557 Gene3D G3DSA:1.10.1390.10 513 554 3.4E-15 T 23-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_18855 bb3806f9ce187e41ddc2a4406feb09fb 557 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 271 284 - T 23-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_18855 bb3806f9ce187e41ddc2a4406feb09fb 557 SUPERFAMILY SSF53697 21 553 3.89E-176 T 23-10-2018 CDG62_18855 bb3806f9ce187e41ddc2a4406feb09fb 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 471 489 2.1E-52 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_18855 bb3806f9ce187e41ddc2a4406feb09fb 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 267 285 2.1E-52 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_18855 bb3806f9ce187e41ddc2a4406feb09fb 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.1E-52 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_18855 bb3806f9ce187e41ddc2a4406feb09fb 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 344 365 2.1E-52 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_18855 bb3806f9ce187e41ddc2a4406feb09fb 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 489 503 2.1E-52 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_18855 bb3806f9ce187e41ddc2a4406feb09fb 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 503 516 2.1E-52 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_18855 bb3806f9ce187e41ddc2a4406feb09fb 557 Gene3D G3DSA:3.40.50.10490 102 297 9.8E-204 T 23-10-2018 CDG62_18855 bb3806f9ce187e41ddc2a4406feb09fb 557 Pfam PF00342 Phosphoglucose isomerase 56 548 3.2E-169 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_18855 bb3806f9ce187e41ddc2a4406feb09fb 557 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 50 530 39.164 T 23-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_13990 f7ccb134ca8d0cdc7c2cb3e21b305eb1 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.7E-28 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_13990 f7ccb134ca8d0cdc7c2cb3e21b305eb1 96 PRINTS PR00297 10kDa chaperonin signature 81 94 1.7E-28 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_13990 f7ccb134ca8d0cdc7c2cb3e21b305eb1 96 PRINTS PR00297 10kDa chaperonin signature 26 47 1.7E-28 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_13990 f7ccb134ca8d0cdc7c2cb3e21b305eb1 96 PRINTS PR00297 10kDa chaperonin signature 4 19 1.7E-28 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_13990 f7ccb134ca8d0cdc7c2cb3e21b305eb1 96 SMART SM00883 3 94 2.1E-50 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_13990 f7ccb134ca8d0cdc7c2cb3e21b305eb1 96 SUPERFAMILY SSF50129 2 95 2.94E-30 T 23-10-2018 IPR011032 GroES-like superfamily CDG62_13990 f7ccb134ca8d0cdc7c2cb3e21b305eb1 96 Hamap MF_00580 10 kDa chaperonin [groS]. 3 95 24.97 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_13990 f7ccb134ca8d0cdc7c2cb3e21b305eb1 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 93 8.6E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_13990 f7ccb134ca8d0cdc7c2cb3e21b305eb1 96 Gene3D G3DSA:2.30.33.40 1 96 1.9E-34 T 23-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 CDG62_15300 946110dc6159ef8059548ab89ef56324 550 Gene3D G3DSA:3.90.480.10 53 387 5.9E-75 T 23-10-2018 CDG62_15300 946110dc6159ef8059548ab89ef56324 550 SUPERFAMILY SSF55124 3 125 7.27E-29 T 23-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_15300 946110dc6159ef8059548ab89ef56324 550 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 411 543 4.7E-9 T 23-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_15300 946110dc6159ef8059548ab89ef56324 550 SUPERFAMILY SSF56014 120 275 1.44E-39 T 23-10-2018 CDG62_15300 946110dc6159ef8059548ab89ef56324 550 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 1.1E-39 T 23-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_15300 946110dc6159ef8059548ab89ef56324 550 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 109 9.6E-18 T 23-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_15300 946110dc6159ef8059548ab89ef56324 550 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 326 394 7.1E-15 T 23-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_15300 946110dc6159ef8059548ab89ef56324 550 SUPERFAMILY SSF55124 253 419 9.74E-24 T 23-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_15300 946110dc6159ef8059548ab89ef56324 550 Gene3D G3DSA:3.30.413.10 119 315 5.9E-75 T 23-10-2018 CDG62_15300 946110dc6159ef8059548ab89ef56324 550 SUPERFAMILY SSF56014 406 548 2.09E-37 T 23-10-2018 CDG62_15300 946110dc6159ef8059548ab89ef56324 550 Gene3D G3DSA:3.30.413.10 406 549 6.7E-29 T 23-10-2018 CDG62_10205 c1bb33004db27bcd3ed479fb4821ba13 373 Gene3D G3DSA:3.90.226.10 13 352 3.1E-88 T 23-10-2018 CDG62_10205 c1bb33004db27bcd3ed479fb4821ba13 373 SUPERFAMILY SSF52096 13 342 1.09E-51 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_10205 c1bb33004db27bcd3ed479fb4821ba13 373 Pfam PF16113 Enoyl-CoA hydratase/isomerase 24 341 7.6E-84 T 23-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 CDG62_18020 190180e3429d56fbb43adbb4697676e1 274 SUPERFAMILY SSF50156 189 270 6.57E-12 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG62_18020 190180e3429d56fbb43adbb4697676e1 274 Gene3D G3DSA:2.30.30.830 82 147 7.1E-12 T 23-10-2018 CDG62_18020 190180e3429d56fbb43adbb4697676e1 274 Gene3D G3DSA:2.30.42.10 177 273 2.0E-11 T 23-10-2018 CDG62_18020 190180e3429d56fbb43adbb4697676e1 274 Pfam PF13180 PDZ domain 196 269 3.8E-7 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG62_18020 190180e3429d56fbb43adbb4697676e1 274 Pfam PF11356 Type II secretion system protein C 25 147 1.7E-18 T 23-10-2018 IPR024961 Type II secretion system protein C, N-terminal CDG62_17630 6939e1d9a96abdeac5072e6c6e244995 173 PIRSF PIRSF019239 7 170 4.6E-46 T 23-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CDG62_17630 6939e1d9a96abdeac5072e6c6e244995 173 Pfam PF01899 Na+/H+ ion antiporter subunit 18 164 2.8E-38 T 23-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CDG62_11220 7d09d84fd903260239b1b7e33264c80c 408 TIGRFAM TIGR00843 benE: benzoate transporter 1 388 1.2E-184 T 23-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CDG62_11220 7d09d84fd903260239b1b7e33264c80c 408 Pfam PF03594 Benzoate membrane transport protein 11 386 2.3E-157 T 23-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CDG62_05815 f0bc2ed31fa6059f6bba183d6386ade0 142 Pfam PF00572 Ribosomal protein L13 15 138 4.0E-56 T 23-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CDG62_05815 f0bc2ed31fa6059f6bba183d6386ade0 142 PIRSF PIRSF002181 1 142 1.7E-49 T 23-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CDG62_05815 f0bc2ed31fa6059f6bba183d6386ade0 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 142 1.4E-63 T 23-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_05815 f0bc2ed31fa6059f6bba183d6386ade0 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.61 T 23-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CDG62_05815 f0bc2ed31fa6059f6bba183d6386ade0 142 SUPERFAMILY SSF52161 1 140 1.96E-58 T 23-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 CDG62_05815 f0bc2ed31fa6059f6bba183d6386ade0 142 Gene3D G3DSA:3.90.1180.10 1 142 8.0E-62 T 23-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 CDG62_06005 600dbf267599dd20b6e6d6a8bd1c276a 284 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 267 39.213 T 23-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CDG62_06005 600dbf267599dd20b6e6d6a8bd1c276a 284 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 266 4.6E-88 T 23-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CDG62_06005 600dbf267599dd20b6e6d6a8bd1c276a 284 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 216 5.5E-28 T 23-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CDG62_06005 600dbf267599dd20b6e6d6a8bd1c276a 284 SUPERFAMILY SSF81624 2 136 9.94E-35 T 23-10-2018 IPR035937 MutM-like, N-terminal CDG62_06005 600dbf267599dd20b6e6d6a8bd1c276a 284 SMART SM00898 2 113 2.5E-42 T 23-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CDG62_06005 600dbf267599dd20b6e6d6a8bd1c276a 284 SMART SM01232 127 219 8.4E-44 T 23-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CDG62_06005 600dbf267599dd20b6e6d6a8bd1c276a 284 Gene3D G3DSA:3.20.190.10 2 126 3.7E-33 T 23-10-2018 IPR035937 MutM-like, N-terminal CDG62_06005 600dbf267599dd20b6e6d6a8bd1c276a 284 SUPERFAMILY SSF46946 128 220 8.37E-29 T 23-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CDG62_06005 600dbf267599dd20b6e6d6a8bd1c276a 284 Gene3D G3DSA:1.10.8.50 129 267 3.9E-45 T 23-10-2018 CDG62_06005 600dbf267599dd20b6e6d6a8bd1c276a 284 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 111 2.7E-26 T 23-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CDG62_06005 600dbf267599dd20b6e6d6a8bd1c276a 284 Pfam PF06827 Zinc finger found in FPG and IleRS 239 267 1.2E-7 T 23-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CDG62_06005 600dbf267599dd20b6e6d6a8bd1c276a 284 SUPERFAMILY SSF57716 215 267 1.48E-15 T 23-10-2018 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 SMART SM00534 620 806 7.6E-112 T 23-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 Pfam PF05188 MutS domain II 136 264 8.1E-21 T 23-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 PIRSF PIRSF037677 7 860 2.1E-145 T 23-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 Gene3D G3DSA:1.10.1420.10 400 516 1.0E-95 T 23-10-2018 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 Pfam PF05190 MutS family domain IV 441 531 7.5E-30 T 23-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 SUPERFAMILY SSF53150 119 277 4.05E-37 T 23-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 Gene3D G3DSA:3.30.420.110 134 273 1.9E-35 T 23-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 13 867 23.726 T 23-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 Gene3D G3DSA:1.10.1420.10 277 572 1.0E-95 T 23-10-2018 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 Pfam PF01624 MutS domain I 14 124 6.1E-39 T 23-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 SUPERFAMILY SSF48334 278 578 1.96E-81 T 23-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 SUPERFAMILY SSF55271 7 120 4.05E-38 T 23-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 SMART SM00533 293 604 5.3E-89 T 23-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 701 717 - T 23-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 Pfam PF05192 MutS domain III 281 572 9.1E-34 T 23-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 Gene3D G3DSA:3.40.1170.10 5 126 2.8E-47 T 23-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 Pfam PF00488 MutS domain V 624 809 4.4E-81 T 23-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 13 872 0.0 T 23-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 Gene3D G3DSA:3.40.50.300 582 876 2.3E-96 T 23-10-2018 CDG62_08535 9c72545cd6a5d4e4e66273d33a1699eb 877 SUPERFAMILY SSF52540 580 810 1.14E-54 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17500 8748d286b22506f5624e8cfaf66c4995 150 Gene3D G3DSA:2.40.128.520 23 150 1.3E-5 T 23-10-2018 CDG62_17500 8748d286b22506f5624e8cfaf66c4995 150 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 27 148 1.2E-12 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG62_07015 19ac0760e374a251fd85e0b76449d352 206 SUPERFAMILY SSF51161 65 203 1.25E-38 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG62_07015 19ac0760e374a251fd85e0b76449d352 206 Gene3D G3DSA:2.160.10.10 7 205 2.7E-57 T 23-10-2018 CDG62_07015 19ac0760e374a251fd85e0b76449d352 206 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 109 144 2.5E-10 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_07015 19ac0760e374a251fd85e0b76449d352 206 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 23-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CDG62_13065 3bc4bc9a6c8c7ef05cd0638896ba72f5 420 Gene3D G3DSA:3.30.1150.10 319 418 3.0E-16 T 23-10-2018 CDG62_13065 3bc4bc9a6c8c7ef05cd0638896ba72f5 420 TIGRFAM TIGR02794 tolA_full: protein TolA 243 418 1.5E-26 T 23-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 CDG62_13065 3bc4bc9a6c8c7ef05cd0638896ba72f5 420 TIGRFAM TIGR02794 tolA_full: protein TolA 15 256 3.1E-20 T 23-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 CDG62_13065 3bc4bc9a6c8c7ef05cd0638896ba72f5 420 Pfam PF13103 TonB C terminal 343 403 1.3E-6 T 23-10-2018 CDG62_13065 3bc4bc9a6c8c7ef05cd0638896ba72f5 420 SUPERFAMILY SSF74653 341 418 3.27E-12 T 23-10-2018 CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 Gene3D G3DSA:3.30.1360.30 275 423 2.8E-197 T 23-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 SUPERFAMILY SSF55261 293 422 1.4E-42 T 23-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 Pfam PF01336 OB-fold nucleic acid binding domain 19 103 1.0E-17 T 23-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 SUPERFAMILY SSF50249 2 106 1.47E-32 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 Gene3D G3DSA:2.40.50.140 1 107 3.7E-33 T 23-10-2018 CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 Gene3D G3DSA:3.30.930.10 120 582 2.8E-197 T 23-10-2018 CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 1.2E-26 T 23-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 1.2E-26 T 23-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 1.2E-26 T 23-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 1.2E-26 T 23-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 SUPERFAMILY SSF55681 115 586 3.38E-104 T 23-10-2018 CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 3.0E-108 T 23-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 8.0E-241 T 23-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 Pfam PF02938 GAD domain 311 409 1.8E-29 T 23-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 CDG62_05500 f183e439719e9169bbf3ad1d30656c7c 594 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 585 33.397 T 23-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CDG62_17475 484cbc693d256ac34cbe3be926257f44 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 6.4E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_17475 484cbc693d256ac34cbe3be926257f44 145 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 11 143 1.1E-46 T 23-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 CDG62_17475 484cbc693d256ac34cbe3be926257f44 145 Gene3D G3DSA:3.30.700.10 35 143 1.5E-30 T 23-10-2018 CDG62_17475 484cbc693d256ac34cbe3be926257f44 145 Pfam PF08334 Type II secretion system (T2SS), protein G 35 143 5.7E-35 T 23-10-2018 IPR013545 Type II secretion system protein G CDG62_17475 484cbc693d256ac34cbe3be926257f44 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 32 3.9E-9 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_17475 484cbc693d256ac34cbe3be926257f44 145 SUPERFAMILY SSF54523 39 142 9.94E-26 T 23-10-2018 CDG62_17475 484cbc693d256ac34cbe3be926257f44 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_17475 484cbc693d256ac34cbe3be926257f44 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 48 66 5.4E-17 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG62_17475 484cbc693d256ac34cbe3be926257f44 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 12 37 5.4E-17 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG62_04285 de66c26e0ed8386192928937cd3cae5b 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 23-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CDG62_04285 de66c26e0ed8386192928937cd3cae5b 207 SMART SM00072 2 184 8.1E-61 T 23-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CDG62_04285 de66c26e0ed8386192928937cd3cae5b 207 Gene3D G3DSA:3.40.50.300 7 180 8.0E-65 T 23-10-2018 CDG62_04285 de66c26e0ed8386192928937cd3cae5b 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 1.8E-72 T 23-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CDG62_04285 de66c26e0ed8386192928937cd3cae5b 207 Pfam PF00625 Guanylate kinase 6 181 6.0E-50 T 23-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CDG62_04285 de66c26e0ed8386192928937cd3cae5b 207 SUPERFAMILY SSF52540 2 184 1.16E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_04285 de66c26e0ed8386192928937cd3cae5b 207 Gene3D G3DSA:3.30.63.10 34 93 8.0E-65 T 23-10-2018 CDG62_04285 de66c26e0ed8386192928937cd3cae5b 207 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 35.344 T 23-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CDG62_19085 744642549315c4f4077dcb6e8c77755d 180 Gene3D G3DSA:3.40.50.360 1 179 3.5E-40 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_19085 744642549315c4f4077dcb6e8c77755d 180 Pfam PF03358 NADPH-dependent FMN reductase 1 137 7.6E-30 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CDG62_19085 744642549315c4f4077dcb6e8c77755d 180 SUPERFAMILY SSF52218 1 174 1.18E-33 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_03895 5405e35b6a765cbc9983704d63f1ec3a 458 SUPERFAMILY SSF116734 6 211 2.94E-37 T 23-10-2018 CDG62_03895 5405e35b6a765cbc9983704d63f1ec3a 458 SUPERFAMILY SSF116734 216 425 5.4E-24 T 23-10-2018 CDG62_03895 5405e35b6a765cbc9983704d63f1ec3a 458 Pfam PF01420 Type I restriction modification DNA specificity domain 263 397 1.6E-6 T 23-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CDG62_03895 5405e35b6a765cbc9983704d63f1ec3a 458 Pfam PF01420 Type I restriction modification DNA specificity domain 8 185 8.4E-22 T 23-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CDG62_03895 5405e35b6a765cbc9983704d63f1ec3a 458 Gene3D G3DSA:3.90.220.20 212 416 2.8E-28 T 23-10-2018 CDG62_03895 5405e35b6a765cbc9983704d63f1ec3a 458 Gene3D G3DSA:3.90.220.20 1 204 1.3E-35 T 23-10-2018 CDG62_13030 1b45d520946afbb64008b78268d56558 335 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 5.8E-30 T 23-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CDG62_13030 1b45d520946afbb64008b78268d56558 335 SUPERFAMILY SSF46785 257 330 8.16E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_13030 1b45d520946afbb64008b78268d56558 335 Gene3D G3DSA:1.10.10.10 257 334 1.8E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_13030 1b45d520946afbb64008b78268d56558 335 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 250 328 2.0E-28 T 23-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CDG62_13030 1b45d520946afbb64008b78268d56558 335 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 10 235 3.9E-116 T 23-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CDG62_13030 1b45d520946afbb64008b78268d56558 335 Gene3D G3DSA:1.10.8.60 182 255 3.5E-32 T 23-10-2018 CDG62_13030 1b45d520946afbb64008b78268d56558 335 Gene3D G3DSA:3.40.50.300 18 181 1.7E-37 T 23-10-2018 CDG62_13030 1b45d520946afbb64008b78268d56558 335 SUPERFAMILY SSF52540 20 252 3.09E-53 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_13030 1b45d520946afbb64008b78268d56558 335 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 326 1.4E-143 T 23-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CDG62_13030 1b45d520946afbb64008b78268d56558 335 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 335 174.841 T 23-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CDG62_13030 1b45d520946afbb64008b78268d56558 335 SMART SM00382 51 178 9.9E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_07660 5eb211d7c8bb19eb36162d1f2f32150c 525 SMART SM00267 357 522 9.9E-56 T 23-10-2018 IPR000160 GGDEF domain CDG62_07660 5eb211d7c8bb19eb36162d1f2f32150c 525 Gene3D G3DSA:3.30.70.270 362 524 7.5E-52 T 23-10-2018 CDG62_07660 5eb211d7c8bb19eb36162d1f2f32150c 525 Pfam PF00990 Diguanylate cyclase, GGDEF domain 369 517 1.8E-43 T 23-10-2018 IPR000160 GGDEF domain CDG62_07660 5eb211d7c8bb19eb36162d1f2f32150c 525 SUPERFAMILY SSF55073 373 521 6.04E-46 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_07660 5eb211d7c8bb19eb36162d1f2f32150c 525 Pfam PF02743 Cache domain 39 270 4.5E-23 T 23-10-2018 IPR033479 Double Cache domain 1 CDG62_07660 5eb211d7c8bb19eb36162d1f2f32150c 525 SUPERFAMILY SSF103190 85 185 4.32E-6 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CDG62_07660 5eb211d7c8bb19eb36162d1f2f32150c 525 Gene3D G3DSA:3.30.450.20 162 284 2.9E-16 T 23-10-2018 CDG62_07660 5eb211d7c8bb19eb36162d1f2f32150c 525 SUPERFAMILY SSF103190 188 266 2.39E-6 T 23-10-2018 IPR029151 Periplasmic sensor-like domain superfamily CDG62_07660 5eb211d7c8bb19eb36162d1f2f32150c 525 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 520 6.3E-48 T 23-10-2018 IPR000160 GGDEF domain CDG62_16155 a5d80643ab9f4f3bc6abad1a434bdc9c 449 Gene3D G3DSA:3.60.120.10 6 442 1.2E-125 T 23-10-2018 IPR005801 ADC synthase GO:0009058 CDG62_16155 a5d80643ab9f4f3bc6abad1a434bdc9c 449 Pfam PF00425 chorismate binding enzyme 178 432 1.8E-92 T 23-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CDG62_16155 a5d80643ab9f4f3bc6abad1a434bdc9c 449 PRINTS PR00095 Anthranilate synthase component I signature 280 293 4.3E-9 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG62_16155 a5d80643ab9f4f3bc6abad1a434bdc9c 449 PRINTS PR00095 Anthranilate synthase component I signature 294 307 4.3E-9 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG62_16155 a5d80643ab9f4f3bc6abad1a434bdc9c 449 PRINTS PR00095 Anthranilate synthase component I signature 374 388 4.3E-9 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG62_16155 a5d80643ab9f4f3bc6abad1a434bdc9c 449 SUPERFAMILY SSF56322 57 441 6.8E-114 T 23-10-2018 IPR005801 ADC synthase GO:0009058 CDG62_06660 0afc48fac12f60e03f03dbe48ed74133 128 Gene3D G3DSA:1.10.10.10 2 121 1.9E-30 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_06660 0afc48fac12f60e03f03dbe48ed74133 128 SUPERFAMILY SSF46785 8 116 3.3E-27 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_06660 0afc48fac12f60e03f03dbe48ed74133 128 Pfam PF01638 HxlR-like helix-turn-helix 25 108 5.6E-20 T 23-10-2018 IPR002577 Helix-turn-helix, HxlR type CDG62_12595 dc8ff066b6cccc9c3f1c59312621ff29 338 PIRSF PIRSF004911 3 336 6.2E-108 T 23-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CDG62_12595 dc8ff066b6cccc9c3f1c59312621ff29 338 Gene3D G3DSA:3.20.20.70 46 331 9.1E-85 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_12595 dc8ff066b6cccc9c3f1c59312621ff29 338 TIGRFAM TIGR00238 TIGR00238: KamA family protein 9 325 7.3E-99 T 23-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CDG62_12595 dc8ff066b6cccc9c3f1c59312621ff29 338 Pfam PF13394 4Fe-4S single cluster domain 114 171 1.0E-5 T 23-10-2018 CDG62_12595 dc8ff066b6cccc9c3f1c59312621ff29 338 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 11 332 9.0E-135 T 23-10-2018 IPR022462 Lysine-2,3-aminomutase-like CDG62_12595 dc8ff066b6cccc9c3f1c59312621ff29 338 SUPERFAMILY SSF102114 100 321 7.59E-22 T 23-10-2018 CDG62_10625 eae3c31b9397813765bbc132d5e0ad82 405 PIRSF PIRSF005572 2 385 1.5E-126 T 23-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CDG62_10625 eae3c31b9397813765bbc132d5e0ad82 405 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 396 53.386 T 23-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CDG62_10625 eae3c31b9397813765bbc132d5e0ad82 405 Gene3D G3DSA:3.40.640.10 16 263 1.3E-157 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_10625 eae3c31b9397813765bbc132d5e0ad82 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 23-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CDG62_10625 eae3c31b9397813765bbc132d5e0ad82 405 Pfam PF00266 Aminotransferase class-V 5 369 9.2E-83 T 23-10-2018 IPR000192 Aminotransferase class V domain CDG62_10625 eae3c31b9397813765bbc132d5e0ad82 405 Gene3D G3DSA:3.90.1150.10 5 377 1.3E-157 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_10625 eae3c31b9397813765bbc132d5e0ad82 405 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 405 2.0E-210 T 23-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CDG62_10625 eae3c31b9397813765bbc132d5e0ad82 405 SUPERFAMILY SSF53383 3 392 2.45E-106 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_02620 542ee98f9e69d49141e431395d6865c6 297 Gene3D G3DSA:1.10.10.10 1 84 8.1E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_02620 542ee98f9e69d49141e431395d6865c6 297 SUPERFAMILY SSF53850 86 293 1.52E-36 T 23-10-2018 CDG62_02620 542ee98f9e69d49141e431395d6865c6 297 Gene3D G3DSA:3.40.190.10 168 265 2.6E-52 T 23-10-2018 CDG62_02620 542ee98f9e69d49141e431395d6865c6 297 Gene3D G3DSA:3.40.190.10 86 285 2.6E-52 T 23-10-2018 CDG62_02620 542ee98f9e69d49141e431395d6865c6 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.8E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_02620 542ee98f9e69d49141e431395d6865c6 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.8E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_02620 542ee98f9e69d49141e431395d6865c6 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.8E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_02620 542ee98f9e69d49141e431395d6865c6 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.9E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_02620 542ee98f9e69d49141e431395d6865c6 297 SUPERFAMILY SSF46785 2 80 1.1E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_02620 542ee98f9e69d49141e431395d6865c6 297 Pfam PF03466 LysR substrate binding domain 93 292 5.5E-22 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_13360 ac18ea69d2df42c9ab30abbe80943ea1 505 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 13 488 5.4E-226 T 23-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 CDG62_13360 ac18ea69d2df42c9ab30abbe80943ea1 505 Pfam PF00171 Aldehyde dehydrogenase family 20 484 5.3E-143 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG62_13360 ac18ea69d2df42c9ab30abbe80943ea1 505 Gene3D G3DSA:3.40.309.10 257 457 3.3E-148 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG62_13360 ac18ea69d2df42c9ab30abbe80943ea1 505 Gene3D G3DSA:3.40.605.10 32 465 3.3E-148 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG62_13360 ac18ea69d2df42c9ab30abbe80943ea1 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDG62_13360 ac18ea69d2df42c9ab30abbe80943ea1 505 SUPERFAMILY SSF53720 9 490 1.31E-148 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG62_03075 424695ffdd5e505c5c25148a705b71d2 609 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 23-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG62_03075 424695ffdd5e505c5c25148a705b71d2 609 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 608 44.816 T 23-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG62_03075 424695ffdd5e505c5c25148a705b71d2 609 Pfam PF00920 Dehydratase family 34 605 1.2E-223 T 23-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG62_03075 424695ffdd5e505c5c25148a705b71d2 609 Gene3D G3DSA:3.50.30.80 421 573 1.7E-55 T 23-10-2018 CDG62_03075 424695ffdd5e505c5c25148a705b71d2 609 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 608 3.9E-255 T 23-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG62_03075 424695ffdd5e505c5c25148a705b71d2 609 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 23-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG62_03075 424695ffdd5e505c5c25148a705b71d2 609 SUPERFAMILY SSF52016 421 608 5.89E-61 T 23-10-2018 CDG62_03075 424695ffdd5e505c5c25148a705b71d2 609 SUPERFAMILY SSF143975 3 420 2.48E-136 T 23-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG62_03285 748da740c588b03fb271a0d2d4601271 406 Gene3D G3DSA:3.40.50.1000 110 397 5.9E-84 T 23-10-2018 IPR023214 HAD superfamily CDG62_03285 748da740c588b03fb271a0d2d4601271 406 SUPERFAMILY SSF55021 1 82 1.42E-9 T 23-10-2018 CDG62_03285 748da740c588b03fb271a0d2d4601271 406 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 193 363 3.3E-32 T 23-10-2018 CDG62_03285 748da740c588b03fb271a0d2d4601271 406 Pfam PF13740 ACT domain 3 79 7.5E-22 T 23-10-2018 CDG62_03285 748da740c588b03fb271a0d2d4601271 406 SUPERFAMILY SSF56784 189 396 1.2E-52 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_03285 748da740c588b03fb271a0d2d4601271 406 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 178 396 1.2E-80 T 23-10-2018 CDG62_03285 748da740c588b03fb271a0d2d4601271 406 Pfam PF12710 haloacid dehalogenase-like hydrolase 194 361 3.1E-23 T 23-10-2018 CDG62_03285 748da740c588b03fb271a0d2d4601271 406 Gene3D G3DSA:3.30.70.260 2 84 5.5E-9 T 23-10-2018 CDG62_03830 4c2f7f9d8060ebc670df4ba702132602 208 Gene3D G3DSA:3.40.50.850 1 208 9.8E-60 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_03830 4c2f7f9d8060ebc670df4ba702132602 208 Pfam PF00857 Isochorismatase family 14 165 4.0E-23 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 CDG62_03830 4c2f7f9d8060ebc670df4ba702132602 208 SUPERFAMILY SSF52499 4 201 6.41E-55 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 SUPERFAMILY SSF50447 207 303 7.46E-30 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 Gene3D G3DSA:2.40.30.10 208 336 3.8E-53 T 23-10-2018 CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.4E-18 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.5E-57 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 3.5E-15 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 SUPERFAMILY SSF52540 6 221 1.1E-59 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 Gene3D G3DSA:3.40.50.300 1 205 1.7E-68 T 23-10-2018 CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.317 T 23-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 Gene3D G3DSA:2.40.30.10 340 394 5.2E-28 T 23-10-2018 CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 Pfam PF03143 Elongation factor Tu C-terminal domain 301 394 7.0E-34 T 23-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 SUPERFAMILY SSF50465 301 394 2.45E-36 T 23-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_15945 ecd4ffac5400998bb1aa0a2d6c122704 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 5.5E-225 T 23-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 SUPERFAMILY SSF50447 207 303 7.46E-30 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 Gene3D G3DSA:2.40.30.10 208 336 3.8E-53 T 23-10-2018 CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.4E-18 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.5E-57 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 3.5E-15 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 SUPERFAMILY SSF52540 6 221 1.1E-59 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 Gene3D G3DSA:3.40.50.300 1 205 1.7E-68 T 23-10-2018 CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.317 T 23-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 Gene3D G3DSA:2.40.30.10 340 394 5.2E-28 T 23-10-2018 CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 Pfam PF03143 Elongation factor Tu C-terminal domain 301 394 7.0E-34 T 23-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 SUPERFAMILY SSF50465 301 394 2.45E-36 T 23-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 6.1E-24 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_17975 ecd4ffac5400998bb1aa0a2d6c122704 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 5.5E-225 T 23-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG62_05355 32c139adf4546ac02aaf0864c44649e9 323 Gene3D G3DSA:1.20.1640.10 108 304 2.9E-11 T 23-10-2018 CDG62_05355 32c139adf4546ac02aaf0864c44649e9 323 Pfam PF02355 Protein export membrane protein 125 300 1.0E-59 T 23-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CDG62_05355 32c139adf4546ac02aaf0864c44649e9 323 Pfam PF07549 SecD/SecF GG Motif 43 70 2.1E-10 T 23-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CDG62_05355 32c139adf4546ac02aaf0864c44649e9 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 86 291 2.9E-46 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDG62_05355 32c139adf4546ac02aaf0864c44649e9 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 49 293 2.1E-74 T 23-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CDG62_05355 32c139adf4546ac02aaf0864c44649e9 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 21 304 26.22 T 23-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CDG62_05355 32c139adf4546ac02aaf0864c44649e9 323 SUPERFAMILY SSF82866 84 301 1.01E-37 T 23-10-2018 CDG62_05355 32c139adf4546ac02aaf0864c44649e9 323 PRINTS PR01755 Bacterial translocase SecF protein signature 48 63 1.7E-26 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDG62_05355 32c139adf4546ac02aaf0864c44649e9 323 PRINTS PR01755 Bacterial translocase SecF protein signature 162 176 1.7E-26 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDG62_05355 32c139adf4546ac02aaf0864c44649e9 323 PRINTS PR01755 Bacterial translocase SecF protein signature 210 228 1.7E-26 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDG62_05355 32c139adf4546ac02aaf0864c44649e9 323 PRINTS PR01755 Bacterial translocase SecF protein signature 242 257 1.7E-26 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDG62_13760 aeecb7dad221c9d46b0cfcf3a774eb01 344 SUPERFAMILY SSF89000 292 341 1.49E-19 T 23-10-2018 CDG62_13760 aeecb7dad221c9d46b0cfcf3a774eb01 344 Gene3D G3DSA:3.20.20.70 3 272 5.2E-94 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_13760 aeecb7dad221c9d46b0cfcf3a774eb01 344 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 344 219.512 T 23-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDG62_13760 aeecb7dad221c9d46b0cfcf3a774eb01 344 Gene3D G3DSA:1.10.8.60 279 344 7.2E-34 T 23-10-2018 CDG62_13760 aeecb7dad221c9d46b0cfcf3a774eb01 344 Pfam PF00682 HMGL-like 9 266 2.8E-74 T 23-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDG62_13760 aeecb7dad221c9d46b0cfcf3a774eb01 344 SUPERFAMILY SSF51569 6 280 3.85E-67 T 23-10-2018 CDG62_13760 aeecb7dad221c9d46b0cfcf3a774eb01 344 Pfam PF07836 DmpG-like communication domain 278 338 4.1E-31 T 23-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDG62_13760 aeecb7dad221c9d46b0cfcf3a774eb01 344 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 8 340 3.8E-179 T 23-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDG62_13760 aeecb7dad221c9d46b0cfcf3a774eb01 344 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 276 340 4.0E-28 T 23-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 Gene3D G3DSA:3.40.50.720 1 113 7.2E-29 T 23-10-2018 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 Pfam PF13241 Putative NAD(P)-binding 7 116 1.0E-25 T 23-10-2018 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 23-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 Gene3D G3DSA:1.10.8.210 150 211 3.8E-9 T 23-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 451 2.9E-97 T 23-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 SUPERFAMILY SSF53790 212 456 5.5E-83 T 23-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 SUPERFAMILY SSF51735 2 113 9.2E-21 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 PIRSF PIRSF036426 1 458 1.7E-198 T 23-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 Hamap MF_01646 Siroheme synthase [cysG]. 1 458 50.144 T 23-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 Gene3D G3DSA:3.30.950.10 332 458 1.0E-48 T 23-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 208 4.6E-62 T 23-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 Pfam PF10414 Sirohaem synthase dimerisation region 152 208 3.7E-18 T 23-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 1.4E-52 T 23-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 23-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 Gene3D G3DSA:3.40.1010.10 215 331 1.9E-46 T 23-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 Gene3D G3DSA:3.30.160.110 114 149 5.4E-15 T 23-10-2018 CDG62_06650 115156ce85b0e1bf4e1d08cd3a121ad9 458 SUPERFAMILY SSF75615 115 210 1.44E-24 T 23-10-2018 CDG62_18230 2345877024cf3c6530302371499e6986 219 Pfam PF00677 Lumazine binding domain 99 183 1.7E-23 T 23-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_18230 2345877024cf3c6530302371499e6986 219 Pfam PF00677 Lumazine binding domain 3 86 2.2E-21 T 23-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_18230 2345877024cf3c6530302371499e6986 219 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 2.0E-62 T 23-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_18230 2345877024cf3c6530302371499e6986 219 Gene3D G3DSA:2.40.30.20 101 203 4.0E-34 T 23-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_18230 2345877024cf3c6530302371499e6986 219 PIRSF PIRSF000498 1 212 2.0E-76 T 23-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_18230 2345877024cf3c6530302371499e6986 219 SUPERFAMILY SSF63380 1 88 8.25E-27 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG62_18230 2345877024cf3c6530302371499e6986 219 SUPERFAMILY SSF63380 92 193 1.11E-30 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG62_18230 2345877024cf3c6530302371499e6986 219 Gene3D G3DSA:2.40.30.20 1 88 1.2E-26 T 23-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_17040 19ab23110e678944c8f35f986ca9ecee 383 Gene3D G3DSA:3.40.50.10350 4 364 1.6E-134 T 23-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold CDG62_17040 19ab23110e678944c8f35f986ca9ecee 383 SUPERFAMILY SSF110738 4 378 8.11E-130 T 23-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 CDG62_17040 19ab23110e678944c8f35f986ca9ecee 383 Pfam PF02595 Glycerate kinase family 4 375 1.6E-141 T 23-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CDG62_17040 19ab23110e678944c8f35f986ca9ecee 383 PIRSF PIRSF006078 2 380 5.3E-133 T 23-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CDG62_17040 19ab23110e678944c8f35f986ca9ecee 383 Gene3D G3DSA:3.90.1510.10 43 278 1.6E-134 T 23-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 CDG62_17040 19ab23110e678944c8f35f986ca9ecee 383 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 4 377 1.3E-148 T 23-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CDG62_11070 b4456999a537da9b2073d2929432c366 1158 SUPERFAMILY SSF52518 31 208 2.24E-15 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG62_11070 b4456999a537da9b2073d2929432c366 1158 Gene3D G3DSA:3.40.920.10 737 942 2.5E-25 T 23-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDG62_11070 b4456999a537da9b2073d2929432c366 1158 SUPERFAMILY SSF52922 276 358 1.15E-5 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDG62_11070 b4456999a537da9b2073d2929432c366 1158 Gene3D G3DSA:3.40.50.970 460 645 9.8E-6 T 23-10-2018 CDG62_11070 b4456999a537da9b2073d2929432c366 1158 SUPERFAMILY SSF52518 455 632 2.3E-13 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG62_11070 b4456999a537da9b2073d2929432c366 1158 SUPERFAMILY SSF53323 739 980 2.35E-27 T 23-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CDG62_11070 b4456999a537da9b2073d2929432c366 1158 Gene3D G3DSA:3.40.50.970 23 231 2.0E-22 T 23-10-2018 CDG62_11070 b4456999a537da9b2073d2929432c366 1158 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 747 932 4.8E-26 T 23-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CDG62_11070 b4456999a537da9b2073d2929432c366 1158 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 476 561 4.6E-6 T 23-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDG62_00330 d0fe4055a7c0824e6f18e9037e7513c4 311 SUPERFAMILY SSF46785 127 227 2.72E-28 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00330 d0fe4055a7c0824e6f18e9037e7513c4 311 Gene3D G3DSA:1.10.10.10 1 139 9.2E-34 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_00330 d0fe4055a7c0824e6f18e9037e7513c4 311 SUPERFAMILY SSF46785 8 134 6.44E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00330 d0fe4055a7c0824e6f18e9037e7513c4 311 Pfam PF01051 Initiator Replication protein 2 224 3.6E-45 T 23-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CDG62_00330 d0fe4055a7c0824e6f18e9037e7513c4 311 Gene3D G3DSA:1.10.10.10 140 232 1.6E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_16435 cb5b8ba55b859a408d13ac3126fc7bb9 89 Pfam PF00381 PTS HPr component phosphorylation site 4 82 6.8E-24 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like CDG62_16435 cb5b8ba55b859a408d13ac3126fc7bb9 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.4E-13 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like CDG62_16435 cb5b8ba55b859a408d13ac3126fc7bb9 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.4E-13 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like CDG62_16435 cb5b8ba55b859a408d13ac3126fc7bb9 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.4E-13 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like CDG62_16435 cb5b8ba55b859a408d13ac3126fc7bb9 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 6.4E-24 T 23-10-2018 IPR000032 Phosphocarrier protein HPr-like CDG62_16435 cb5b8ba55b859a408d13ac3126fc7bb9 89 SUPERFAMILY SSF55594 1 87 3.27E-24 T 23-10-2018 IPR035895 HPr-like superfamily CDG62_16435 cb5b8ba55b859a408d13ac3126fc7bb9 89 Gene3D G3DSA:3.30.1340.10 1 88 2.9E-26 T 23-10-2018 IPR035895 HPr-like superfamily CDG62_10540 9ba2556904a58b9492b15038a90bcd96 401 Pfam PF00872 Transposase, Mutator family 7 374 2.5E-100 T 23-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CDG62_16795 9ba2556904a58b9492b15038a90bcd96 401 Pfam PF00872 Transposase, Mutator family 7 374 2.5E-100 T 23-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CDG62_08955 9ba2556904a58b9492b15038a90bcd96 401 Pfam PF00872 Transposase, Mutator family 7 374 2.5E-100 T 23-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CDG62_16675 9ba2556904a58b9492b15038a90bcd96 401 Pfam PF00872 Transposase, Mutator family 7 374 2.5E-100 T 23-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CDG62_15690 9ba2556904a58b9492b15038a90bcd96 401 Pfam PF00872 Transposase, Mutator family 7 374 2.5E-100 T 23-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CDG62_00465 9ba2556904a58b9492b15038a90bcd96 401 Pfam PF00872 Transposase, Mutator family 7 374 2.5E-100 T 23-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CDG62_11580 9ba2556904a58b9492b15038a90bcd96 401 Pfam PF00872 Transposase, Mutator family 7 374 2.5E-100 T 23-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CDG62_13390 9ba2556904a58b9492b15038a90bcd96 401 Pfam PF00872 Transposase, Mutator family 7 374 2.5E-100 T 23-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CDG62_10270 4c748a8763c4adb1c99d5eb3825ba3a2 720 SUPERFAMILY SSF51645 3 716 1.7E-285 T 23-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDG62_10270 4c748a8763c4adb1c99d5eb3825ba3a2 720 Gene3D G3DSA:1.20.1220.12 579 720 1.2E-66 T 23-10-2018 CDG62_10270 4c748a8763c4adb1c99d5eb3825ba3a2 720 Gene3D G3DSA:2.170.170.11 132 261 1.1E-259 T 23-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDG62_10270 4c748a8763c4adb1c99d5eb3825ba3a2 720 Gene3D G3DSA:3.20.20.360 10 578 1.1E-259 T 23-10-2018 CDG62_10270 4c748a8763c4adb1c99d5eb3825ba3a2 720 Hamap MF_00641 Malate synthase G [glcB]. 1 720 371.683 T 23-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDG62_10270 4c748a8763c4adb1c99d5eb3825ba3a2 720 Pfam PF01274 Malate synthase 17 686 1.9E-157 T 23-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDG62_10270 4c748a8763c4adb1c99d5eb3825ba3a2 720 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 715 0.0 T 23-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CDG62_14990 683ff5313a48b05a1bb2b74664f935d6 181 Pfam PF04542 Sigma-70 region 2 17 82 8.6E-12 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDG62_14990 683ff5313a48b05a1bb2b74664f935d6 181 SUPERFAMILY SSF88659 108 174 8.04E-10 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDG62_14990 683ff5313a48b05a1bb2b74664f935d6 181 SUPERFAMILY SSF88946 10 80 2.9E-15 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDG62_14990 683ff5313a48b05a1bb2b74664f935d6 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 161 2.9E-18 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDG62_14990 683ff5313a48b05a1bb2b74664f935d6 181 Gene3D G3DSA:1.10.10.10 109 172 1.8E-6 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_14990 683ff5313a48b05a1bb2b74664f935d6 181 Pfam PF08281 Sigma-70, region 4 127 165 2.5E-7 T 23-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG62_14990 683ff5313a48b05a1bb2b74664f935d6 181 Gene3D G3DSA:1.10.1740.10 3 80 1.7E-12 T 23-10-2018 CDG62_05885 caab08c28395ad9f9b7a5a1a44a90dde 213 Pfam PF03006 Haemolysin-III related 12 205 1.6E-34 T 23-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 CDG62_05885 caab08c28395ad9f9b7a5a1a44a90dde 213 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 212 7.9E-58 T 23-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 SMART SM00086 471 513 0.19 T 23-10-2018 IPR001610 PAC motif CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 SMART SM00086 345 389 0.034 T 23-10-2018 IPR001610 PAC motif CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 SUPERFAMILY SSF141868 700 949 8.5E-88 T 23-10-2018 IPR035919 EAL domain superfamily CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 SUPERFAMILY SSF55785 409 520 9.77E-18 T 23-10-2018 IPR035965 PAS domain superfamily CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 Gene3D G3DSA:3.30.70.270 518 695 1.3E-36 T 23-10-2018 CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 Gene3D G3DSA:3.30.450.20 285 392 6.2E-15 T 23-10-2018 CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 Pfam PF13426 PAS domain 408 512 8.1E-12 T 23-10-2018 IPR000014 PAS domain CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 526 683 5.2E-19 T 23-10-2018 IPR000160 GGDEF domain CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 Gene3D G3DSA:3.20.20.450 697 948 5.1E-97 T 23-10-2018 IPR035919 EAL domain superfamily CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 Pfam PF00990 Diguanylate cyclase, GGDEF domain 525 680 2.0E-27 T 23-10-2018 IPR000160 GGDEF domain CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 Gene3D G3DSA:3.30.450.20 393 515 8.1E-21 T 23-10-2018 CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 SUPERFAMILY SSF55073 529 686 1.57E-29 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 SMART SM00052 695 940 1.1E-111 T 23-10-2018 IPR001633 EAL domain CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 394 520 7.0E-15 T 23-10-2018 IPR000014 PAS domain CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 317 396 9.4E-6 T 23-10-2018 IPR000014 PAS domain CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 SMART SM00267 513 685 2.8E-25 T 23-10-2018 IPR000160 GGDEF domain CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 Pfam PF08447 PAS fold 319 382 3.4E-11 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 SUPERFAMILY SSF55785 297 388 3.05E-10 T 23-10-2018 IPR035965 PAS domain superfamily CDG62_13260 7e31a495c10e2064749499ab087a7d97 958 Pfam PF00563 EAL domain 701 935 1.7E-75 T 23-10-2018 IPR001633 EAL domain CDG62_12965 d10dee6f3cbafe779efc85a6f306c01a 152 PIRSF PIRSF000239 4 152 3.3E-22 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG62_12965 d10dee6f3cbafe779efc85a6f306c01a 152 SUPERFAMILY SSF52833 6 151 2.67E-38 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_12965 d10dee6f3cbafe779efc85a6f306c01a 152 Pfam PF00578 AhpC/TSA family 13 127 2.7E-24 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG62_12965 d10dee6f3cbafe779efc85a6f306c01a 152 Gene3D G3DSA:3.40.30.10 3 151 4.9E-35 T 23-10-2018 CDG62_04950 df1a645448f3bb30a60a90f7ead81245 309 Gene3D G3DSA:3.30.70.270 142 309 9.8E-55 T 23-10-2018 CDG62_04950 df1a645448f3bb30a60a90f7ead81245 309 Pfam PF01590 GAF domain 1 133 1.9E-11 T 23-10-2018 IPR003018 GAF domain GO:0005515 CDG62_04950 df1a645448f3bb30a60a90f7ead81245 309 SUPERFAMILY SSF55781 1 143 2.4E-20 T 23-10-2018 CDG62_04950 df1a645448f3bb30a60a90f7ead81245 309 SMART SM00267 136 308 4.5E-52 T 23-10-2018 IPR000160 GGDEF domain CDG62_04950 df1a645448f3bb30a60a90f7ead81245 309 Gene3D G3DSA:3.30.450.40 1 141 7.9E-20 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG62_04950 df1a645448f3bb30a60a90f7ead81245 309 SMART SM00065 1 144 3.8E-7 T 23-10-2018 IPR003018 GAF domain GO:0005515 CDG62_04950 df1a645448f3bb30a60a90f7ead81245 309 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 145 307 1.6E-49 T 23-10-2018 IPR000160 GGDEF domain CDG62_04950 df1a645448f3bb30a60a90f7ead81245 309 Pfam PF00990 Diguanylate cyclase, GGDEF domain 147 304 1.5E-44 T 23-10-2018 IPR000160 GGDEF domain CDG62_04950 df1a645448f3bb30a60a90f7ead81245 309 SUPERFAMILY SSF55073 152 308 4.79E-48 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_05725 b077c400149fa42fff36ba372ba1cc79 412 SMART SM00267 233 401 8.3E-52 T 23-10-2018 IPR000160 GGDEF domain CDG62_05725 b077c400149fa42fff36ba372ba1cc79 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 244 393 9.3E-46 T 23-10-2018 IPR000160 GGDEF domain CDG62_05725 b077c400149fa42fff36ba372ba1cc79 412 Pfam PF17152 Periplasmic sensor domain 42 140 2.0E-11 T 23-10-2018 IPR033417 Periplasmic sensor domain CHASE8 CDG62_05725 b077c400149fa42fff36ba372ba1cc79 412 SUPERFAMILY SSF55073 249 399 3.92E-43 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_05725 b077c400149fa42fff36ba372ba1cc79 412 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 240 394 5.9E-41 T 23-10-2018 IPR000160 GGDEF domain CDG62_05725 b077c400149fa42fff36ba372ba1cc79 412 Gene3D G3DSA:3.30.70.270 229 399 8.5E-50 T 23-10-2018 CDG62_07135 ba85c398074c68147ca442734c38cb1e 448 Pfam PF01769 Divalent cation transporter 319 438 1.2E-24 T 23-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CDG62_07135 ba85c398074c68147ca442734c38cb1e 448 SUPERFAMILY SSF161093 276 445 1.96E-46 T 23-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 CDG62_07135 ba85c398074c68147ca442734c38cb1e 448 Gene3D G3DSA:1.25.60.10 7 126 3.1E-13 T 23-10-2018 IPR038076 MgtE, N-terminal domain superfamily CDG62_07135 ba85c398074c68147ca442734c38cb1e 448 Pfam PF03448 MgtE intracellular N domain 31 128 1.3E-16 T 23-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CDG62_07135 ba85c398074c68147ca442734c38cb1e 448 TIGRFAM TIGR00400 mgtE: magnesium transporter 25 446 2.1E-106 T 23-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CDG62_07135 ba85c398074c68147ca442734c38cb1e 448 SMART SM00116 138 191 0.011 T 23-10-2018 IPR000644 CBS domain CDG62_07135 ba85c398074c68147ca442734c38cb1e 448 SMART SM00116 202 250 0.024 T 23-10-2018 IPR000644 CBS domain CDG62_07135 ba85c398074c68147ca442734c38cb1e 448 SMART SM00924 30 131 2.0E-18 T 23-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CDG62_07135 ba85c398074c68147ca442734c38cb1e 448 Gene3D G3DSA:1.10.357.20 271 446 3.2E-51 T 23-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain CDG62_07135 ba85c398074c68147ca442734c38cb1e 448 Pfam PF00571 CBS domain 195 248 4.6E-5 T 23-10-2018 IPR000644 CBS domain CDG62_07135 ba85c398074c68147ca442734c38cb1e 448 Pfam PF00571 CBS domain 131 189 7.5E-8 T 23-10-2018 IPR000644 CBS domain CDG62_07135 ba85c398074c68147ca442734c38cb1e 448 SUPERFAMILY SSF158791 12 127 6.28E-17 T 23-10-2018 CDG62_07135 ba85c398074c68147ca442734c38cb1e 448 Gene3D G3DSA:3.10.580.10 128 255 8.1E-42 T 23-10-2018 CDG62_07135 ba85c398074c68147ca442734c38cb1e 448 SUPERFAMILY SSF54631 131 264 8.18E-31 T 23-10-2018 CDG62_13995 7880c4c1ba0dafd7da85c13df07eae52 252 Gene3D G3DSA:3.60.21.10 1 219 6.9E-24 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like CDG62_13995 7880c4c1ba0dafd7da85c13df07eae52 252 Pfam PF00149 Calcineurin-like phosphoesterase 2 189 3.5E-12 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDG62_13995 7880c4c1ba0dafd7da85c13df07eae52 252 SUPERFAMILY SSF56300 2 230 3.8E-34 T 23-10-2018 CDG62_12185 f179fa0a9031a09f53a3c125d794d641 465 Gene3D G3DSA:1.20.1600.10 63 462 4.4E-100 T 23-10-2018 CDG62_12185 f179fa0a9031a09f53a3c125d794d641 465 SUPERFAMILY SSF56954 6 462 8.11E-84 T 23-10-2018 CDG62_12185 f179fa0a9031a09f53a3c125d794d641 465 Gene3D G3DSA:2.20.200.10 109 352 4.4E-100 T 23-10-2018 CDG62_12185 f179fa0a9031a09f53a3c125d794d641 465 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 15 462 9.7E-89 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CDG62_12185 f179fa0a9031a09f53a3c125d794d641 465 Pfam PF02321 Outer membrane efflux protein 277 461 4.5E-19 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_12185 f179fa0a9031a09f53a3c125d794d641 465 Pfam PF02321 Outer membrane efflux protein 72 251 9.1E-22 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_13050 a4e2ec42dc5d7f7418a64056ed71641b 135 Gene3D G3DSA:3.10.129.10 1 130 4.1E-41 T 23-10-2018 CDG62_13050 a4e2ec42dc5d7f7418a64056ed71641b 135 Pfam PF03061 Thioesterase superfamily 19 101 2.2E-15 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDG62_13050 a4e2ec42dc5d7f7418a64056ed71641b 135 PIRSF PIRSF003230 1 135 4.1E-53 T 23-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CDG62_13050 a4e2ec42dc5d7f7418a64056ed71641b 135 SUPERFAMILY SSF54637 2 129 1.65E-37 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_13050 a4e2ec42dc5d7f7418a64056ed71641b 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 5 126 1.0E-47 T 23-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 CDG62_13050 a4e2ec42dc5d7f7418a64056ed71641b 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 118 6.5E-27 T 23-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CDG62_01940 41ea894f695dd4430ef21990e2c39036 259 Gene3D G3DSA:3.30.200.20 1 88 2.1E-24 T 23-10-2018 CDG62_01940 41ea894f695dd4430ef21990e2c39036 259 Pfam PF01636 Phosphotransferase enzyme family 27 242 1.1E-14 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase CDG62_01940 41ea894f695dd4430ef21990e2c39036 259 PIRSF PIRSF000706 1 259 3.7E-77 T 23-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 CDG62_01940 41ea894f695dd4430ef21990e2c39036 259 SUPERFAMILY SSF56112 2 248 5.32E-36 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_01940 41ea894f695dd4430ef21990e2c39036 259 Gene3D G3DSA:3.90.1200.10 95 259 5.6E-32 T 23-10-2018 CDG62_03495 1b817c2656e82993bcf6499912e6ff13 286 Gene3D G3DSA:1.10.10.10 193 279 2.1E-30 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_03495 1b817c2656e82993bcf6499912e6ff13 286 SUPERFAMILY SSF46689 7 58 7.17E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_03495 1b817c2656e82993bcf6499912e6ff13 286 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 244 250 - T 23-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CDG62_03495 1b817c2656e82993bcf6499912e6ff13 286 SMART SM00342 24 108 1.4E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_03495 1b817c2656e82993bcf6499912e6ff13 286 Gene3D G3DSA:3.30.160.70 107 192 2.7E-19 T 23-10-2018 CDG62_03495 1b817c2656e82993bcf6499912e6ff13 286 SUPERFAMILY SSF46767 193 274 3.66E-27 T 23-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 CDG62_03495 1b817c2656e82993bcf6499912e6ff13 286 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 195 274 1.1E-25 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CDG62_03495 1b817c2656e82993bcf6499912e6ff13 286 Gene3D G3DSA:1.10.10.60 6 106 2.4E-23 T 23-10-2018 CDG62_03495 1b817c2656e82993bcf6499912e6ff13 286 Pfam PF12833 Helix-turn-helix domain 30 109 3.9E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_03495 1b817c2656e82993bcf6499912e6ff13 286 SUPERFAMILY SSF53155 114 192 2.55E-16 T 23-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CDG62_03495 1b817c2656e82993bcf6499912e6ff13 286 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 194 270 6.8E-28 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CDG62_09950 424d725e12f3bc29242f4bfabb4b94bd 388 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 102 3.7E-42 T 23-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG62_09950 424d725e12f3bc29242f4bfabb4b94bd 388 Gene3D G3DSA:3.30.300.10 103 378 3.5E-174 T 23-10-2018 CDG62_09950 424d725e12f3bc29242f4bfabb4b94bd 388 Gene3D G3DSA:3.30.300.10 6 234 3.5E-174 T 23-10-2018 CDG62_09950 424d725e12f3bc29242f4bfabb4b94bd 388 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 23-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG62_09950 424d725e12f3bc29242f4bfabb4b94bd 388 SUPERFAMILY SSF55973 111 233 2.16E-50 T 23-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG62_09950 424d725e12f3bc29242f4bfabb4b94bd 388 SUPERFAMILY SSF55973 234 386 1.1E-68 T 23-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG62_09950 424d725e12f3bc29242f4bfabb4b94bd 388 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 1.7E-44 T 23-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG62_09950 424d725e12f3bc29242f4bfabb4b94bd 388 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 23-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG62_09950 424d725e12f3bc29242f4bfabb4b94bd 388 PIRSF PIRSF000497 1 387 1.3E-171 T 23-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG62_09950 424d725e12f3bc29242f4bfabb4b94bd 388 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 384 5.1E-188 T 23-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG62_09950 424d725e12f3bc29242f4bfabb4b94bd 388 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 375 4.6E-67 T 23-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG62_09950 424d725e12f3bc29242f4bfabb4b94bd 388 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 57.254 T 23-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG62_09950 424d725e12f3bc29242f4bfabb4b94bd 388 SUPERFAMILY SSF55973 6 110 3.41E-46 T 23-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CDG62_09950 424d725e12f3bc29242f4bfabb4b94bd 388 Gene3D G3DSA:3.30.300.10 12 271 3.5E-174 T 23-10-2018 CDG62_18175 e3ba9c1dc9b4b0aab6d346ce0c049bf0 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.7E-6 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_18175 e3ba9c1dc9b4b0aab6d346ce0c049bf0 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.7E-6 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_18175 e3ba9c1dc9b4b0aab6d346ce0c049bf0 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.7E-6 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_18175 e3ba9c1dc9b4b0aab6d346ce0c049bf0 211 Gene3D G3DSA:3.40.50.12740 2 209 2.3E-60 T 23-10-2018 CDG62_18175 e3ba9c1dc9b4b0aab6d346ce0c049bf0 211 SUPERFAMILY SSF46894 138 209 6.46E-19 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG62_18175 e3ba9c1dc9b4b0aab6d346ce0c049bf0 211 Pfam PF00072 Response regulator receiver domain 4 116 1.3E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_18175 e3ba9c1dc9b4b0aab6d346ce0c049bf0 211 SMART SM00448 2 115 3.9E-30 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_18175 e3ba9c1dc9b4b0aab6d346ce0c049bf0 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_18175 e3ba9c1dc9b4b0aab6d346ce0c049bf0 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 2.9E-15 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_18175 e3ba9c1dc9b4b0aab6d346ce0c049bf0 211 SUPERFAMILY SSF52172 2 132 3.7E-34 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_18175 e3ba9c1dc9b4b0aab6d346ce0c049bf0 211 SMART SM00421 146 203 7.3E-15 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_10840 3257128da92dfa2029698be8943077dd 399 Gene3D G3DSA:1.20.140.10 239 390 6.6E-31 T 23-10-2018 CDG62_10840 3257128da92dfa2029698be8943077dd 399 SUPERFAMILY SSF47203 240 393 7.09E-31 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_10840 3257128da92dfa2029698be8943077dd 399 Gene3D G3DSA:1.10.540.10 1 129 1.9E-5 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG62_10840 3257128da92dfa2029698be8943077dd 399 SUPERFAMILY SSF56645 8 252 2.23E-41 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_10840 3257128da92dfa2029698be8943077dd 399 Gene3D G3DSA:2.40.110.10 130 236 6.8E-34 T 23-10-2018 CDG62_10840 3257128da92dfa2029698be8943077dd 399 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 223 1.9E-21 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG62_10840 3257128da92dfa2029698be8943077dd 399 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 241 390 6.5E-40 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG62_06485 8eb7aae8eebeea77771880c7433998f2 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG62_06485 8eb7aae8eebeea77771880c7433998f2 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 14 137 5.2E-48 T 23-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06485 8eb7aae8eebeea77771880c7433998f2 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG62_06485 8eb7aae8eebeea77771880c7433998f2 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 7.8E-12 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG62_06485 8eb7aae8eebeea77771880c7433998f2 180 Gene3D G3DSA:3.30.70.3270 31 174 4.3E-41 T 23-10-2018 CDG62_06485 8eb7aae8eebeea77771880c7433998f2 180 SUPERFAMILY SSF54862 40 160 1.34E-27 T 23-10-2018 CDG62_06485 8eb7aae8eebeea77771880c7433998f2 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 5 163 27.644 T 23-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_14825 150afc04110fb8975b6685bcc1df9310 347 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 6 334 1.4E-127 T 23-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CDG62_14825 150afc04110fb8975b6685bcc1df9310 347 PIRSF PIRSF005508 1 347 9.9E-133 T 23-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CDG62_14825 150afc04110fb8975b6685bcc1df9310 347 Gene3D G3DSA:1.20.1530.20 1 340 5.5E-24 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG62_14825 150afc04110fb8975b6685bcc1df9310 347 Pfam PF01758 Sodium Bile acid symporter family 51 247 2.2E-59 T 23-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CDG62_12320 a59a6972712daf6d1ce65793c7a05fc5 334 SUPERFAMILY SSF51679 6 329 2.49E-54 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG62_12320 a59a6972712daf6d1ce65793c7a05fc5 334 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 7 328 1.5E-97 T 23-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 CDG62_12320 a59a6972712daf6d1ce65793c7a05fc5 334 Pfam PF00296 Luciferase-like monooxygenase 20 266 3.3E-26 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CDG62_12320 a59a6972712daf6d1ce65793c7a05fc5 334 Gene3D G3DSA:3.20.20.30 3 333 1.8E-78 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG62_12455 f2abcb6adc981f6a92b2f75f79a1aee4 341 Gene3D G3DSA:3.30.420.10 172 333 1.6E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_12455 f2abcb6adc981f6a92b2f75f79a1aee4 341 Pfam PF00665 Integrase core domain 180 285 2.7E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_12455 f2abcb6adc981f6a92b2f75f79a1aee4 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG62_12455 f2abcb6adc981f6a92b2f75f79a1aee4 341 SUPERFAMILY SSF53098 180 326 1.52E-27 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_00910 f2abcb6adc981f6a92b2f75f79a1aee4 341 Gene3D G3DSA:3.30.420.10 172 333 1.6E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_00910 f2abcb6adc981f6a92b2f75f79a1aee4 341 Pfam PF00665 Integrase core domain 180 285 2.7E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_00910 f2abcb6adc981f6a92b2f75f79a1aee4 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG62_00910 f2abcb6adc981f6a92b2f75f79a1aee4 341 SUPERFAMILY SSF53098 180 326 1.52E-27 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_09760 f2abcb6adc981f6a92b2f75f79a1aee4 341 Gene3D G3DSA:3.30.420.10 172 333 1.6E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_09760 f2abcb6adc981f6a92b2f75f79a1aee4 341 Pfam PF00665 Integrase core domain 180 285 2.7E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_09760 f2abcb6adc981f6a92b2f75f79a1aee4 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG62_09760 f2abcb6adc981f6a92b2f75f79a1aee4 341 SUPERFAMILY SSF53098 180 326 1.52E-27 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_15660 f2abcb6adc981f6a92b2f75f79a1aee4 341 Gene3D G3DSA:3.30.420.10 172 333 1.6E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_15660 f2abcb6adc981f6a92b2f75f79a1aee4 341 Pfam PF00665 Integrase core domain 180 285 2.7E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_15660 f2abcb6adc981f6a92b2f75f79a1aee4 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG62_15660 f2abcb6adc981f6a92b2f75f79a1aee4 341 SUPERFAMILY SSF53098 180 326 1.52E-27 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_12330 7ad77793ec10720b1a45b692dc40c752 206 SUPERFAMILY SSF52833 2 81 9.87E-23 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_12330 7ad77793ec10720b1a45b692dc40c752 206 Gene3D G3DSA:3.40.30.10 2 84 1.1E-32 T 23-10-2018 CDG62_12330 7ad77793ec10720b1a45b692dc40c752 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 115 197 1.8E-10 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal CDG62_12330 7ad77793ec10720b1a45b692dc40c752 206 SUPERFAMILY SSF47616 73 203 2.51E-23 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG62_12330 7ad77793ec10720b1a45b692dc40c752 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 75 2.6E-16 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG62_12330 7ad77793ec10720b1a45b692dc40c752 206 Gene3D G3DSA:1.20.1050.10 85 203 5.6E-32 T 23-10-2018 CDG62_03325 e357edc1595a5cd3a8bfc80a7f071617 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 5.8E-25 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_03325 e357edc1595a5cd3a8bfc80a7f071617 236 Pfam PF00072 Response regulator receiver domain 6 119 4.6E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_03325 e357edc1595a5cd3a8bfc80a7f071617 236 Gene3D G3DSA:3.40.50.2300 2 131 1.0E-37 T 23-10-2018 CDG62_03325 e357edc1595a5cd3a8bfc80a7f071617 236 SMART SM00862 152 227 1.6E-24 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_03325 e357edc1595a5cd3a8bfc80a7f071617 236 SUPERFAMILY SSF52172 5 129 4.98E-41 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_03325 e357edc1595a5cd3a8bfc80a7f071617 236 SMART SM00448 4 118 1.6E-42 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_03325 e357edc1595a5cd3a8bfc80a7f071617 236 Gene3D G3DSA:1.10.10.10 132 231 6.2E-34 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_03325 e357edc1595a5cd3a8bfc80a7f071617 236 SUPERFAMILY SSF46894 131 228 7.94E-29 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG62_03325 e357edc1595a5cd3a8bfc80a7f071617 236 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 228 8.7E-101 T 23-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 CDG62_11190 bb6b7175794f4ec833700543760d1719 96 PIRSF PIRSF001486 1 94 6.1E-49 T 23-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 CDG62_11190 bb6b7175794f4ec833700543760d1719 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 2.0E-25 T 23-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 CDG62_11190 bb6b7175794f4ec833700543760d1719 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 3.7E-42 T 23-10-2018 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 CDG62_11190 bb6b7175794f4ec833700543760d1719 96 Gene3D G3DSA:3.30.70.1060 1 94 8.0E-38 T 23-10-2018 CDG62_11190 bb6b7175794f4ec833700543760d1719 96 SUPERFAMILY SSF54909 1 95 2.04E-40 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_11190 bb6b7175794f4ec833700543760d1719 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 3.4E-48 T 23-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 CDG62_04220 26e69aadaad49fb6f8cae4f5c7ad443c 473 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 9 472 1.1E-236 T 23-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CDG62_04220 26e69aadaad49fb6f8cae4f5c7ad443c 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 460 9.5E-25 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_04220 26e69aadaad49fb6f8cae4f5c7ad443c 473 PRINTS PR00419 Adrenodoxin reductase family signature 326 339 1.5E-34 T 23-10-2018 CDG62_04220 26e69aadaad49fb6f8cae4f5c7ad443c 473 PRINTS PR00419 Adrenodoxin reductase family signature 151 173 1.5E-34 T 23-10-2018 CDG62_04220 26e69aadaad49fb6f8cae4f5c7ad443c 473 PRINTS PR00419 Adrenodoxin reductase family signature 174 187 1.5E-34 T 23-10-2018 CDG62_04220 26e69aadaad49fb6f8cae4f5c7ad443c 473 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 1.5E-34 T 23-10-2018 CDG62_04220 26e69aadaad49fb6f8cae4f5c7ad443c 473 PRINTS PR00419 Adrenodoxin reductase family signature 216 226 1.5E-34 T 23-10-2018 CDG62_04220 26e69aadaad49fb6f8cae4f5c7ad443c 473 Gene3D G3DSA:1.10.1060.10 12 148 5.0E-32 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDG62_04220 26e69aadaad49fb6f8cae4f5c7ad443c 473 SUPERFAMILY SSF46548 10 160 2.2E-37 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDG62_04220 26e69aadaad49fb6f8cae4f5c7ad443c 473 SUPERFAMILY SSF51971 148 402 1.53E-68 T 23-10-2018 CDG62_04220 26e69aadaad49fb6f8cae4f5c7ad443c 473 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 28 135 4.8E-36 T 23-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CDG62_04220 26e69aadaad49fb6f8cae4f5c7ad443c 473 Gene3D G3DSA:3.40.50.720 149 254 1.4E-13 T 23-10-2018 CDG62_04220 26e69aadaad49fb6f8cae4f5c7ad443c 473 Gene3D G3DSA:3.50.50.60 255 401 1.6E-45 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_17495 6b4b1006db087df4d6caba54e9cab78e 291 Gene3D G3DSA:3.55.30.10 1 175 1.4E-49 T 23-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CDG62_17495 6b4b1006db087df4d6caba54e9cab78e 291 Pfam PF01430 Hsp33 protein 5 278 1.1E-73 T 23-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CDG62_17495 6b4b1006db087df4d6caba54e9cab78e 291 Gene3D G3DSA:1.10.287.480 182 230 4.5E-17 T 23-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily CDG62_17495 6b4b1006db087df4d6caba54e9cab78e 291 PIRSF PIRSF005261 1 289 2.4E-67 T 23-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CDG62_17495 6b4b1006db087df4d6caba54e9cab78e 291 SUPERFAMILY SSF118352 231 287 2.09E-15 T 23-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CDG62_17495 6b4b1006db087df4d6caba54e9cab78e 291 Gene3D G3DSA:3.90.1280.10 231 288 2.5E-18 T 23-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CDG62_17495 6b4b1006db087df4d6caba54e9cab78e 291 SUPERFAMILY SSF64397 2 239 4.58E-60 T 23-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CDG62_09890 caf1dddd38d88e8081d49b7e0f3a9cf2 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 275 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_09890 caf1dddd38d88e8081d49b7e0f3a9cf2 432 Gene3D G3DSA:3.90.1150.10 10 424 1.3E-176 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_09890 caf1dddd38d88e8081d49b7e0f3a9cf2 432 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 431 104.617 T 23-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CDG62_09890 caf1dddd38d88e8081d49b7e0f3a9cf2 432 Gene3D G3DSA:3.40.640.10 72 322 1.3E-176 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_09890 caf1dddd38d88e8081d49b7e0f3a9cf2 432 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 430 4.4E-188 T 23-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CDG62_09890 caf1dddd38d88e8081d49b7e0f3a9cf2 432 Pfam PF00202 Aminotransferase class-III 35 401 3.3E-77 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_09890 caf1dddd38d88e8081d49b7e0f3a9cf2 432 SUPERFAMILY SSF53383 5 429 2.56E-129 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_18015 912741daf703ca1c37154f59a18ee650 783 Gene3D G3DSA:3.30.1370.120 190 257 3.4E-14 T 23-10-2018 IPR038591 NolW-like superfamily CDG62_18015 912741daf703ca1c37154f59a18ee650 783 Pfam PF00263 Bacterial type II and III secretion system protein 474 638 3.8E-49 T 23-10-2018 IPR004846 Type II/III secretion system GO:0009306 CDG62_18015 912741daf703ca1c37154f59a18ee650 783 Gene3D G3DSA:3.30.1370.120 24 185 1.6E-52 T 23-10-2018 IPR038591 NolW-like superfamily CDG62_18015 912741daf703ca1c37154f59a18ee650 783 PRINTS PR00811 Bacterial general secretion pathway protein D signature 384 394 1.8E-32 T 23-10-2018 IPR001775 GspD/PilQ family CDG62_18015 912741daf703ca1c37154f59a18ee650 783 PRINTS PR00811 Bacterial general secretion pathway protein D signature 470 494 1.8E-32 T 23-10-2018 IPR001775 GspD/PilQ family CDG62_18015 912741daf703ca1c37154f59a18ee650 783 PRINTS PR00811 Bacterial general secretion pathway protein D signature 603 621 1.8E-32 T 23-10-2018 IPR001775 GspD/PilQ family CDG62_18015 912741daf703ca1c37154f59a18ee650 783 PRINTS PR00811 Bacterial general secretion pathway protein D signature 505 515 1.8E-32 T 23-10-2018 IPR001775 GspD/PilQ family CDG62_18015 912741daf703ca1c37154f59a18ee650 783 PRINTS PR00811 Bacterial general secretion pathway protein D signature 626 640 1.8E-32 T 23-10-2018 IPR001775 GspD/PilQ family CDG62_18015 912741daf703ca1c37154f59a18ee650 783 Pfam PF03958 Bacterial type II/III secretion system short domain 267 384 1.2E-12 T 23-10-2018 IPR005644 NolW-like CDG62_18015 912741daf703ca1c37154f59a18ee650 783 Pfam PF03958 Bacterial type II/III secretion system short domain 192 260 5.4E-12 T 23-10-2018 IPR005644 NolW-like CDG62_18015 912741daf703ca1c37154f59a18ee650 783 Pfam PF03958 Bacterial type II/III secretion system short domain 128 184 9.6E-9 T 23-10-2018 IPR005644 NolW-like CDG62_18015 912741daf703ca1c37154f59a18ee650 783 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 33 648 1.3E-161 T 23-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 Gene3D G3DSA:3.30.70.1430 571 672 0.0 T 23-10-2018 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 Pfam PF00873 AcrB/AcrD/AcrF family 1 1040 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 SUPERFAMILY SSF82714 726 813 5.1E-23 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 Gene3D G3DSA:1.20.1640.10 8 516 0.0 T 23-10-2018 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 SUPERFAMILY SSF82866 810 1042 2.88E-43 T 23-10-2018 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 5.9E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 5.9E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 5.9E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 5.9E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.9E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 5.9E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 PRINTS PR00702 Acriflavin resistance protein family signature 625 639 5.9E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.9E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 5.9E-109 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 Gene3D G3DSA:3.30.70.1430 38 821 0.0 T 23-10-2018 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 SUPERFAMILY SSF82693 38 131 1.34E-28 T 23-10-2018 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 Gene3D G3DSA:3.30.2090.10 725 813 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 Gene3D G3DSA:3.30.70.1440 673 873 0.0 T 23-10-2018 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 SUPERFAMILY SSF82693 569 673 1.05E-25 T 23-10-2018 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 SUPERFAMILY SSF82693 135 330 5.41E-24 T 23-10-2018 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1055 0.0 T 23-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 23-10-2018 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 Gene3D G3DSA:1.20.1640.10 517 1037 0.0 T 23-10-2018 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 SUPERFAMILY SSF82866 296 497 4.58E-48 T 23-10-2018 CDG62_06590 469c6cb093950f4520a85efbefdc518d 1058 SUPERFAMILY SSF82714 182 272 5.49E-23 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_16325 731e5088938619c7e54d2d092afc0f47 507 SUPERFAMILY SSF53067 135 311 1.73E-47 T 23-10-2018 CDG62_16325 731e5088938619c7e54d2d092afc0f47 507 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 11 306 8.0E-98 T 23-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 CDG62_16325 731e5088938619c7e54d2d092afc0f47 507 Gene3D G3DSA:3.30.420.40 12 303 2.3E-90 T 23-10-2018 CDG62_16325 731e5088938619c7e54d2d092afc0f47 507 PIRSF PIRSF001267 1 502 1.2E-194 T 23-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CDG62_16325 731e5088938619c7e54d2d092afc0f47 507 SUPERFAMILY SSF53067 11 131 2.85E-34 T 23-10-2018 CDG62_16325 731e5088938619c7e54d2d092afc0f47 507 Gene3D G3DSA:3.30.420.150 115 295 2.3E-90 T 23-10-2018 CDG62_16325 731e5088938619c7e54d2d092afc0f47 507 SUPERFAMILY SSF109604 313 499 4.93E-44 T 23-10-2018 CDG62_16325 731e5088938619c7e54d2d092afc0f47 507 Pfam PF02541 Ppx/GppA phosphatase family 25 308 1.5E-82 T 23-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CDG62_16325 731e5088938619c7e54d2d092afc0f47 507 Gene3D G3DSA:1.10.3210.10 310 506 7.4E-56 T 23-10-2018 CDG62_09325 da76300947decda90cb3053340bca24f 344 SUPERFAMILY SSF55073 184 332 4.79E-42 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_09325 da76300947decda90cb3053340bca24f 344 SMART SM00267 168 334 3.3E-50 T 23-10-2018 IPR000160 GGDEF domain CDG62_09325 da76300947decda90cb3053340bca24f 344 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 331 1.9E-44 T 23-10-2018 IPR000160 GGDEF domain CDG62_09325 da76300947decda90cb3053340bca24f 344 Gene3D G3DSA:3.30.70.270 173 336 2.7E-50 T 23-10-2018 CDG62_09325 da76300947decda90cb3053340bca24f 344 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 330 4.2E-43 T 23-10-2018 IPR000160 GGDEF domain CDG62_03545 80157db8e73ad2a2a3c7bc8afcfad900 420 SMART SM00842 8 197 2.1E-63 T 23-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CDG62_03545 80157db8e73ad2a2a3c7bc8afcfad900 420 Gene3D G3DSA:3.30.420.40 198 351 2.8E-84 T 23-10-2018 CDG62_03545 80157db8e73ad2a2a3c7bc8afcfad900 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 1.2E-8 T 23-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 CDG62_03545 80157db8e73ad2a2a3c7bc8afcfad900 420 Gene3D G3DSA:3.30.420.40 11 375 2.8E-84 T 23-10-2018 CDG62_03545 80157db8e73ad2a2a3c7bc8afcfad900 420 SUPERFAMILY SSF53067 8 198 1.3E-37 T 23-10-2018 CDG62_03545 80157db8e73ad2a2a3c7bc8afcfad900 420 Gene3D G3DSA:3.90.640.10 236 299 2.8E-84 T 23-10-2018 CDG62_03545 80157db8e73ad2a2a3c7bc8afcfad900 420 PIRSF PIRSF003101 1 420 4.2E-103 T 23-10-2018 IPR020823 Cell division protein FtsA CDG62_03545 80157db8e73ad2a2a3c7bc8afcfad900 420 SUPERFAMILY SSF53067 199 380 1.83E-34 T 23-10-2018 CDG62_03545 80157db8e73ad2a2a3c7bc8afcfad900 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 4 420 22.604 T 23-10-2018 IPR020823 Cell division protein FtsA CDG62_03545 80157db8e73ad2a2a3c7bc8afcfad900 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 380 9.3E-92 T 23-10-2018 IPR020823 Cell division protein FtsA CDG62_03545 80157db8e73ad2a2a3c7bc8afcfad900 420 Pfam PF14450 Cell division protein FtsA 208 377 2.3E-20 T 23-10-2018 CDG62_03545 80157db8e73ad2a2a3c7bc8afcfad900 420 Gene3D G3DSA:3.30.1490.110 83 170 2.8E-84 T 23-10-2018 CDG62_03545 80157db8e73ad2a2a3c7bc8afcfad900 420 Pfam PF14450 Cell division protein FtsA 9 172 2.1E-9 T 23-10-2018 CDG62_03885 e214b8bf448f26848b4c177f2da988ae 1171 SUPERFAMILY SSF52540 460 841 1.29E-33 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_03885 e214b8bf448f26848b4c177f2da988ae 1171 Gene3D G3DSA:3.40.50.300 639 864 5.7E-50 T 23-10-2018 CDG62_03885 e214b8bf448f26848b4c177f2da988ae 1171 Gene3D G3DSA:3.90.1570.30 236 427 2.7E-14 T 23-10-2018 CDG62_03885 e214b8bf448f26848b4c177f2da988ae 1171 SMART SM00490 746 832 0.0043 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_03885 e214b8bf448f26848b4c177f2da988ae 1171 Pfam PF00271 Helicase conserved C-terminal domain 727 830 2.2E-9 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_03885 e214b8bf448f26848b4c177f2da988ae 1171 SMART SM00487 443 653 2.6E-15 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG62_03885 e214b8bf448f26848b4c177f2da988ae 1171 Pfam PF08463 EcoEI R protein C-terminal 1006 1166 3.7E-31 T 23-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 CDG62_03885 e214b8bf448f26848b4c177f2da988ae 1171 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 258 347 3.2E-10 T 23-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CDG62_03885 e214b8bf448f26848b4c177f2da988ae 1171 Gene3D G3DSA:3.40.50.300 428 638 2.1E-55 T 23-10-2018 CDG62_03885 e214b8bf448f26848b4c177f2da988ae 1171 Pfam PF04851 Type III restriction enzyme, res subunit 445 625 5.0E-34 T 23-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDG62_03525 c85235fdc2bde0e1790e36531de540c1 365 SUPERFAMILY SSF53756 10 363 1.01E-114 T 23-10-2018 CDG62_03525 c85235fdc2bde0e1790e36531de540c1 365 Gene3D G3DSA:3.40.50.2000 9 185 9.2E-61 T 23-10-2018 CDG62_03525 c85235fdc2bde0e1790e36531de540c1 365 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 12 148 1.5E-43 T 23-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_03525 c85235fdc2bde0e1790e36531de540c1 365 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 12 365 34.651 T 23-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_03525 c85235fdc2bde0e1790e36531de540c1 365 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 7 362 3.3E-106 T 23-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_03525 c85235fdc2bde0e1790e36531de540c1 365 Gene3D G3DSA:3.40.50.2000 186 349 2.2E-48 T 23-10-2018 CDG62_03525 c85235fdc2bde0e1790e36531de540c1 365 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 195 356 3.1E-39 T 23-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 CDG62_18160 7391f71639bdc172970e0790880e2b0d 434 PIRSF PIRSF000098 1 432 6.1E-160 T 23-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CDG62_18160 7391f71639bdc172970e0790880e2b0d 434 SUPERFAMILY SSF51735 2 157 1.09E-32 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_18160 7391f71639bdc172970e0790880e2b0d 434 Pfam PF01842 ACT domain 353 418 1.0E-12 T 23-10-2018 IPR002912 ACT domain CDG62_18160 7391f71639bdc172970e0790880e2b0d 434 SUPERFAMILY SSF55347 136 301 5.23E-53 T 23-10-2018 CDG62_18160 7391f71639bdc172970e0790880e2b0d 434 SUPERFAMILY SSF55021 351 421 2.7E-12 T 23-10-2018 CDG62_18160 7391f71639bdc172970e0790880e2b0d 434 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 128 1.5E-17 T 23-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CDG62_18160 7391f71639bdc172970e0790880e2b0d 434 Gene3D G3DSA:3.40.50.720 4 339 6.6E-161 T 23-10-2018 CDG62_18160 7391f71639bdc172970e0790880e2b0d 434 Gene3D G3DSA:3.30.70.260 348 420 6.6E-161 T 23-10-2018 CDG62_18160 7391f71639bdc172970e0790880e2b0d 434 Gene3D G3DSA:3.30.360.10 135 347 6.6E-161 T 23-10-2018 CDG62_18160 7391f71639bdc172970e0790880e2b0d 434 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 182 204 - T 23-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CDG62_18160 7391f71639bdc172970e0790880e2b0d 434 Pfam PF00742 Homoserine dehydrogenase 136 314 1.9E-64 T 23-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CDG62_14335 8952459eb017a666607c1f6c8230e055 332 Pfam PF01734 Patatin-like phospholipase 66 223 5.0E-25 T 23-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDG62_14335 8952459eb017a666607c1f6c8230e055 332 SUPERFAMILY SSF52151 44 312 6.54E-54 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG62_14335 8952459eb017a666607c1f6c8230e055 332 Gene3D G3DSA:3.40.1090.10 157 289 6.4E-18 T 23-10-2018 CDG62_14335 8952459eb017a666607c1f6c8230e055 332 Gene3D G3DSA:3.40.1090.10 46 156 1.3E-29 T 23-10-2018 CDG62_01890 3fa27b19c2aaf58034fa6b6460a61e7f 166 SUPERFAMILY SSF55729 9 155 1.36E-26 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_01890 3fa27b19c2aaf58034fa6b6460a61e7f 166 Gene3D G3DSA:3.40.630.30 3 153 1.1E-32 T 23-10-2018 CDG62_01890 3fa27b19c2aaf58034fa6b6460a61e7f 166 Pfam PF00583 Acetyltransferase (GNAT) family 31 143 3.3E-14 T 23-10-2018 IPR000182 GNAT domain CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 SUPERFAMILY SSF81665 441 967 1.31E-16 T 23-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 SUPERFAMILY SSF47240 116 159 2.46E-6 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 Gene3D G3DSA:3.40.1110.10 683 803 3.2E-81 T 23-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 SUPERFAMILY SSF47240 231 274 6.49E-6 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 SUPERFAMILY SSF56784 670 978 1.26E-51 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 SUPERFAMILY SSF81653 476 571 4.32E-25 T 23-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 Pfam PF00122 E1-E2 ATPase 472 652 5.6E-53 T 23-10-2018 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 443 950 1.6E-84 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 SMART SM00746 23 60 4.1E-8 T 23-10-2018 IPR011017 TRASH domain CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 SMART SM00746 117 154 4.0E-9 T 23-10-2018 IPR011017 TRASH domain CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 SMART SM00746 234 271 1.2E-9 T 23-10-2018 IPR011017 TRASH domain CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 Gene3D G3DSA:2.70.150.20 464 576 6.1E-35 T 23-10-2018 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 PRINTS PR00943 Copper-transporting ATPase signature 594 608 1.8E-9 T 23-10-2018 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 PRINTS PR00943 Copper-transporting ATPase signature 461 479 1.8E-9 T 23-10-2018 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 PRINTS PR00943 Copper-transporting ATPase signature 655 670 1.8E-9 T 23-10-2018 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 PRINTS PR00943 Copper-transporting ATPase signature 848 865 1.8E-9 T 23-10-2018 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 PRINTS PR00943 Copper-transporting ATPase signature 441 460 1.8E-9 T 23-10-2018 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 401 980 1.1E-177 T 23-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 380 981 6.9E-166 T 23-10-2018 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 Pfam PF00702 haloacid dehalogenase-like hydrolase 668 885 1.5E-34 T 23-10-2018 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 Gene3D G3DSA:3.40.50.1000 653 921 3.2E-81 T 23-10-2018 IPR023214 HAD superfamily CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 Gene3D G3DSA:1.10.620.20 4 87 1.7E-5 T 23-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 Gene3D G3DSA:1.10.620.20 218 280 6.5E-6 T 23-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 674 680 - T 23-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 SUPERFAMILY SSF47240 22 65 3.51E-5 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 Gene3D G3DSA:1.10.620.20 117 190 3.4E-9 T 23-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 521 535 2.9E-24 T 23-10-2018 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 818 828 2.9E-24 T 23-10-2018 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 894 906 2.9E-24 T 23-10-2018 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 871 890 2.9E-24 T 23-10-2018 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 672 686 2.9E-24 T 23-10-2018 CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 Pfam PF04945 YHS domain 116 159 5.4E-15 T 23-10-2018 IPR007029 YHS domain CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 Pfam PF04945 YHS domain 233 275 1.2E-15 T 23-10-2018 IPR007029 YHS domain CDG62_13850 c39c9284e4ee3cbfeebc87eb78a46eaa 984 Pfam PF04945 YHS domain 22 66 2.8E-13 T 23-10-2018 IPR007029 YHS domain CDG62_02975 bd2db82ca7afbadee6a6a2eff80f7e03 222 Pfam PF06314 Acetoacetate decarboxylase (ADC) 12 133 1.6E-9 T 23-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 CDG62_02975 bd2db82ca7afbadee6a6a2eff80f7e03 222 SUPERFAMILY SSF160104 12 139 3.66E-16 T 23-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 CDG62_02975 bd2db82ca7afbadee6a6a2eff80f7e03 222 Gene3D G3DSA:2.40.400.10 4 165 1.2E-16 T 23-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 CDG62_11305 2b7def6cfd3536f05d300aa5852f34d4 288 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 155 1.0E-35 T 23-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CDG62_11305 2b7def6cfd3536f05d300aa5852f34d4 288 PIRSF PIRSF000103 1 286 1.7E-53 T 23-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDG62_11305 2b7def6cfd3536f05d300aa5852f34d4 288 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 23-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDG62_11305 2b7def6cfd3536f05d300aa5852f34d4 288 Gene3D G3DSA:1.10.1040.10 162 287 1.6E-27 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDG62_11305 2b7def6cfd3536f05d300aa5852f34d4 288 SUPERFAMILY SSF51735 2 156 3.81E-36 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_11305 2b7def6cfd3536f05d300aa5852f34d4 288 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 158 277 2.0E-34 T 23-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CDG62_11305 2b7def6cfd3536f05d300aa5852f34d4 288 Gene3D G3DSA:3.40.50.720 1 161 7.8E-40 T 23-10-2018 CDG62_11305 2b7def6cfd3536f05d300aa5852f34d4 288 SUPERFAMILY SSF48179 156 282 7.6E-25 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_12545 c9463e13b08ab52d5794967f21827d13 441 SUPERFAMILY SSF53098 129 286 1.67E-17 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_12545 c9463e13b08ab52d5794967f21827d13 441 Gene3D G3DSA:3.30.420.10 125 330 5.4E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_12545 c9463e13b08ab52d5794967f21827d13 441 Pfam PF13384 Homeodomain-like domain 3 51 1.1E-9 T 23-10-2018 CDG62_12545 c9463e13b08ab52d5794967f21827d13 441 SUPERFAMILY SSF46689 8 110 1.97E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_00475 c9463e13b08ab52d5794967f21827d13 441 SUPERFAMILY SSF53098 129 286 1.67E-17 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_00475 c9463e13b08ab52d5794967f21827d13 441 Gene3D G3DSA:3.30.420.10 125 330 5.4E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_00475 c9463e13b08ab52d5794967f21827d13 441 Pfam PF13384 Homeodomain-like domain 3 51 1.1E-9 T 23-10-2018 CDG62_00475 c9463e13b08ab52d5794967f21827d13 441 SUPERFAMILY SSF46689 8 110 1.97E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_11780 c9463e13b08ab52d5794967f21827d13 441 SUPERFAMILY SSF53098 129 286 1.67E-17 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_11780 c9463e13b08ab52d5794967f21827d13 441 Gene3D G3DSA:3.30.420.10 125 330 5.4E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_11780 c9463e13b08ab52d5794967f21827d13 441 Pfam PF13384 Homeodomain-like domain 3 51 1.1E-9 T 23-10-2018 CDG62_11780 c9463e13b08ab52d5794967f21827d13 441 SUPERFAMILY SSF46689 8 110 1.97E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_00685 c9463e13b08ab52d5794967f21827d13 441 SUPERFAMILY SSF53098 129 286 1.67E-17 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_00685 c9463e13b08ab52d5794967f21827d13 441 Gene3D G3DSA:3.30.420.10 125 330 5.4E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_00685 c9463e13b08ab52d5794967f21827d13 441 Pfam PF13384 Homeodomain-like domain 3 51 1.1E-9 T 23-10-2018 CDG62_00685 c9463e13b08ab52d5794967f21827d13 441 SUPERFAMILY SSF46689 8 110 1.97E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_00585 c9463e13b08ab52d5794967f21827d13 441 SUPERFAMILY SSF53098 129 286 1.67E-17 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_00585 c9463e13b08ab52d5794967f21827d13 441 Gene3D G3DSA:3.30.420.10 125 330 5.4E-16 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_00585 c9463e13b08ab52d5794967f21827d13 441 Pfam PF13384 Homeodomain-like domain 3 51 1.1E-9 T 23-10-2018 CDG62_00585 c9463e13b08ab52d5794967f21827d13 441 SUPERFAMILY SSF46689 8 110 1.97E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_15405 0296dda4ed660a928db5a1f4da89aba9 133 Pfam PF03817 Malonate transporter MadL subunit 1 115 8.1E-41 T 23-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 CDG62_15405 0296dda4ed660a928db5a1f4da89aba9 133 TIGRFAM TIGR00807 malonate_madL: malonate transporter, MadL subunit 1 127 6.3E-59 T 23-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 CDG62_18995 f7690c0cf3814e87262129fe1b4f4271 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 179 5.6E-10 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_18995 f7690c0cf3814e87262129fe1b4f4271 231 Gene3D G3DSA:1.10.150.240 16 84 9.2E-51 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG62_18995 f7690c0cf3814e87262129fe1b4f4271 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 184 2.8E-34 T 23-10-2018 CDG62_18995 f7690c0cf3814e87262129fe1b4f4271 231 SUPERFAMILY SSF56784 1 218 3.25E-54 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_18995 f7690c0cf3814e87262129fe1b4f4271 231 Gene3D G3DSA:3.40.50.1000 4 190 9.2E-51 T 23-10-2018 IPR023214 HAD superfamily CDG62_18995 f7690c0cf3814e87262129fe1b4f4271 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 89 184 1.6E-10 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_18995 f7690c0cf3814e87262129fe1b4f4271 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 1.8E-6 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_18995 f7690c0cf3814e87262129fe1b4f4271 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 1.8E-6 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_18995 f7690c0cf3814e87262129fe1b4f4271 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 1.8E-6 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_18995 f7690c0cf3814e87262129fe1b4f4271 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 1.8E-6 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_16410 d72f20363269556cabf6c49b9e3a6cb6 216 SUPERFAMILY SSF53335 33 198 3.7E-24 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_16410 d72f20363269556cabf6c49b9e3a6cb6 216 Pfam PF13847 Methyltransferase domain 50 191 4.0E-13 T 23-10-2018 IPR025714 Methyltransferase domain CDG62_16410 d72f20363269556cabf6c49b9e3a6cb6 216 Gene3D G3DSA:3.40.50.150 17 211 5.8E-26 T 23-10-2018 CDG62_09020 3cef44742097b15ed7afd669194a98c5 829 Gene3D G3DSA:2.40.160.50 431 829 1.3E-109 T 23-10-2018 CDG62_09020 3cef44742097b15ed7afd669194a98c5 829 Gene3D G3DSA:3.10.20.310 96 177 6.3E-17 T 23-10-2018 CDG62_09020 3cef44742097b15ed7afd669194a98c5 829 Gene3D G3DSA:3.10.20.310 179 268 2.7E-19 T 23-10-2018 CDG62_09020 3cef44742097b15ed7afd669194a98c5 829 Pfam PF01103 Surface antigen 452 829 4.5E-78 T 23-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CDG62_09020 3cef44742097b15ed7afd669194a98c5 829 Gene3D G3DSA:3.10.20.310 269 349 7.5E-15 T 23-10-2018 CDG62_09020 3cef44742097b15ed7afd669194a98c5 829 Pfam PF07244 Surface antigen variable number repeat 351 425 9.5E-15 T 23-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CDG62_09020 3cef44742097b15ed7afd669194a98c5 829 Pfam PF07244 Surface antigen variable number repeat 180 267 7.6E-13 T 23-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CDG62_09020 3cef44742097b15ed7afd669194a98c5 829 Pfam PF07244 Surface antigen variable number repeat 98 176 7.0E-14 T 23-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CDG62_09020 3cef44742097b15ed7afd669194a98c5 829 Pfam PF07244 Surface antigen variable number repeat 271 348 4.6E-10 T 23-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CDG62_09020 3cef44742097b15ed7afd669194a98c5 829 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 29 829 2.1E-240 T 23-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CDG62_09020 3cef44742097b15ed7afd669194a98c5 829 Gene3D G3DSA:3.10.20.310 22 95 6.3E-18 T 23-10-2018 CDG62_09020 3cef44742097b15ed7afd669194a98c5 829 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 8 829 23.503 T 23-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CDG62_09020 3cef44742097b15ed7afd669194a98c5 829 Gene3D G3DSA:3.10.20.310 350 425 1.2E-23 T 23-10-2018 CDG62_09020 3cef44742097b15ed7afd669194a98c5 829 PIRSF PIRSF006076 1 829 5.4E-244 T 23-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CDG62_17195 1ea9a927ef6057cd3b12339088c07e09 160 SUPERFAMILY SSF55811 7 154 3.11E-31 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG62_17195 1ea9a927ef6057cd3b12339088c07e09 160 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.5E-7 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG62_17195 1ea9a927ef6057cd3b12339088c07e09 160 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.5E-7 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG62_17195 1ea9a927ef6057cd3b12339088c07e09 160 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDG62_17195 1ea9a927ef6057cd3b12339088c07e09 160 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.206 T 23-10-2018 IPR022927 RNA pyrophosphohydrolase RppH CDG62_17195 1ea9a927ef6057cd3b12339088c07e09 160 Gene3D G3DSA:3.90.79.10 1 155 5.7E-45 T 23-10-2018 CDG62_17195 1ea9a927ef6057cd3b12339088c07e09 160 Pfam PF00293 NUDIX domain 7 145 7.5E-26 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG62_10700 533b829c89eff9728a2916945cc96913 290 PIRSF PIRSF000103 1 288 2.1E-57 T 23-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDG62_10700 533b829c89eff9728a2916945cc96913 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 160 281 7.9E-37 T 23-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CDG62_10700 533b829c89eff9728a2916945cc96913 290 SUPERFAMILY SSF51735 4 158 8.42E-38 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_10700 533b829c89eff9728a2916945cc96913 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 157 1.2E-38 T 23-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CDG62_10700 533b829c89eff9728a2916945cc96913 290 SUPERFAMILY SSF48179 160 286 7.37E-30 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_10700 533b829c89eff9728a2916945cc96913 290 Gene3D G3DSA:3.40.50.720 1 157 1.2E-44 T 23-10-2018 CDG62_10700 533b829c89eff9728a2916945cc96913 290 Gene3D G3DSA:1.10.1040.10 160 290 6.2E-32 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDG62_10700 533b829c89eff9728a2916945cc96913 290 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 23-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDG62_04275 53757f4e416e34739f5fcb32a9907adf 699 SUPERFAMILY SSF109604 16 194 9.42E-61 T 23-10-2018 CDG62_04275 53757f4e416e34739f5fcb32a9907adf 699 SMART SM00954 235 345 1.2E-6 T 23-10-2018 IPR007685 RelA/SpoT GO:0015969 CDG62_04275 53757f4e416e34739f5fcb32a9907adf 699 Gene3D G3DSA:1.10.3210.10 5 194 4.8E-67 T 23-10-2018 CDG62_04275 53757f4e416e34739f5fcb32a9907adf 699 Pfam PF02824 TGS domain 381 440 1.3E-15 T 23-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CDG62_04275 53757f4e416e34739f5fcb32a9907adf 699 SUPERFAMILY SSF81271 381 440 1.87E-14 T 23-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CDG62_04275 53757f4e416e34739f5fcb32a9907adf 699 SUPERFAMILY SSF81301 198 354 3.43E-20 T 23-10-2018 CDG62_04275 53757f4e416e34739f5fcb32a9907adf 699 Pfam PF13328 HD domain 32 178 1.8E-40 T 23-10-2018 IPR003607 HD/PDEase domain CDG62_04275 53757f4e416e34739f5fcb32a9907adf 699 Gene3D G3DSA:3.30.460.10 197 325 3.3E-8 T 23-10-2018 CDG62_04275 53757f4e416e34739f5fcb32a9907adf 699 SMART SM00471 47 157 1.1E-10 T 23-10-2018 IPR003607 HD/PDEase domain CDG62_04275 53757f4e416e34739f5fcb32a9907adf 699 Gene3D G3DSA:3.10.20.30 375 445 1.8E-21 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG62_13715 c11a28eef79b8d80b147b92846e103ac 440 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 352 364 - T 23-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CDG62_13715 c11a28eef79b8d80b147b92846e103ac 440 SUPERFAMILY SSF55920 180 438 2.22E-84 T 23-10-2018 IPR036005 Creatinase/aminopeptidase-like CDG62_13715 c11a28eef79b8d80b147b92846e103ac 440 Pfam PF05195 Aminopeptidase P, N-terminal domain 8 128 2.1E-36 T 23-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CDG62_13715 c11a28eef79b8d80b147b92846e103ac 440 Gene3D G3DSA:3.90.230.10 177 440 9.3E-98 T 23-10-2018 CDG62_13715 c11a28eef79b8d80b147b92846e103ac 440 Pfam PF00557 Metallopeptidase family M24 186 416 2.4E-61 T 23-10-2018 IPR000994 Peptidase M24 CDG62_13715 c11a28eef79b8d80b147b92846e103ac 440 Gene3D G3DSA:3.40.350.10 3 176 3.5E-53 T 23-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDG62_13715 c11a28eef79b8d80b147b92846e103ac 440 SUPERFAMILY SSF53092 6 179 6.02E-46 T 23-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDG62_13715 c11a28eef79b8d80b147b92846e103ac 440 SMART SM01011 3 141 9.8E-53 T 23-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CDG62_05910 f73fc1b3a4df1e6c069e1fc00192ab15 401 Pfam PF00108 Thiolase, N-terminal domain 5 270 1.0E-48 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG62_05910 f73fc1b3a4df1e6c069e1fc00192ab15 401 PIRSF PIRSF000429 1 401 1.3E-111 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_05910 f73fc1b3a4df1e6c069e1fc00192ab15 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CDG62_05910 f73fc1b3a4df1e6c069e1fc00192ab15 401 SUPERFAMILY SSF53901 3 278 1.61E-61 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_05910 f73fc1b3a4df1e6c069e1fc00192ab15 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 1.0E-130 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_05910 f73fc1b3a4df1e6c069e1fc00192ab15 401 SUPERFAMILY SSF53901 279 400 9.1E-44 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_05910 f73fc1b3a4df1e6c069e1fc00192ab15 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 CDG62_05910 f73fc1b3a4df1e6c069e1fc00192ab15 401 Gene3D G3DSA:3.40.47.10 125 396 2.0E-143 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_05910 f73fc1b3a4df1e6c069e1fc00192ab15 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDG62_05910 f73fc1b3a4df1e6c069e1fc00192ab15 401 Pfam PF02803 Thiolase, C-terminal domain 278 399 1.4E-45 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG62_05910 f73fc1b3a4df1e6c069e1fc00192ab15 401 Gene3D G3DSA:3.40.47.10 6 298 2.0E-143 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_01735 26271ae2fbfd05deac49e143f2c0d09a 305 Gene3D G3DSA:3.40.50.150 61 166 1.8E-5 T 23-10-2018 CDG62_01735 26271ae2fbfd05deac49e143f2c0d09a 305 SUPERFAMILY SSF53335 36 162 9.97E-8 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_01735 26271ae2fbfd05deac49e143f2c0d09a 305 Pfam PF00145 C-5 cytosine-specific DNA methylase 57 155 5.0E-5 T 23-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CDG62_05420 03cd06115255c5adcb0a294ef3d1f803 340 SUPERFAMILY SSF51735 1 338 1.83E-87 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_05420 03cd06115255c5adcb0a294ef3d1f803 340 Gene3D G3DSA:3.40.50.720 4 321 3.3E-96 T 23-10-2018 CDG62_05420 03cd06115255c5adcb0a294ef3d1f803 340 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 7.3E-28 T 23-10-2018 CDG62_05420 03cd06115255c5adcb0a294ef3d1f803 340 PRINTS PR01713 Nucleotide sugar epimerase signature 221 236 7.3E-28 T 23-10-2018 CDG62_05420 03cd06115255c5adcb0a294ef3d1f803 340 PRINTS PR01713 Nucleotide sugar epimerase signature 300 317 7.3E-28 T 23-10-2018 CDG62_05420 03cd06115255c5adcb0a294ef3d1f803 340 PRINTS PR01713 Nucleotide sugar epimerase signature 261 276 7.3E-28 T 23-10-2018 CDG62_05420 03cd06115255c5adcb0a294ef3d1f803 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 329 7.0E-54 T 23-10-2018 IPR016040 NAD(P)-binding domain CDG62_05420 03cd06115255c5adcb0a294ef3d1f803 340 Gene3D G3DSA:3.90.25.10 185 333 3.3E-96 T 23-10-2018 CDG62_11445 f72c8dbb3082f0f6c1fde7dac7a1a693 107 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 11 106 21.613 T 23-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 CDG62_11445 f72c8dbb3082f0f6c1fde7dac7a1a693 107 SUPERFAMILY SSF51182 12 104 1.12E-25 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG62_11445 f72c8dbb3082f0f6c1fde7dac7a1a693 107 Pfam PF06865 Protein of unknown function (DUF1255) 13 104 2.1E-26 T 23-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 CDG62_11445 f72c8dbb3082f0f6c1fde7dac7a1a693 107 Gene3D G3DSA:2.60.120.10 1 107 1.3E-39 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG62_09375 367cebf39c8ebcdd75fc7521e4611616 378 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 375 2.6E-159 T 23-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 CDG62_09375 367cebf39c8ebcdd75fc7521e4611616 378 SUPERFAMILY SSF48256 6 375 4.71E-126 T 23-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 CDG62_09375 367cebf39c8ebcdd75fc7521e4611616 378 PIRSF PIRSF001369 3 376 4.4E-120 T 23-10-2018 IPR024176 Citrate synthase, bacterial-type CDG62_09375 367cebf39c8ebcdd75fc7521e4611616 378 Gene3D G3DSA:1.10.230.10 224 322 1.3E-122 T 23-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain CDG62_09375 367cebf39c8ebcdd75fc7521e4611616 378 Pfam PF00285 Citrate synthase, C-terminal domain 11 357 5.2E-116 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG62_09375 367cebf39c8ebcdd75fc7521e4611616 378 PRINTS PR00143 Citrate synthase signature 251 271 1.5E-38 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG62_09375 367cebf39c8ebcdd75fc7521e4611616 378 PRINTS PR00143 Citrate synthase signature 126 139 1.5E-38 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG62_09375 367cebf39c8ebcdd75fc7521e4611616 378 PRINTS PR00143 Citrate synthase signature 176 191 1.5E-38 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG62_09375 367cebf39c8ebcdd75fc7521e4611616 378 PRINTS PR00143 Citrate synthase signature 308 324 1.5E-38 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG62_09375 367cebf39c8ebcdd75fc7521e4611616 378 PRINTS PR00143 Citrate synthase signature 198 226 1.5E-38 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG62_09375 367cebf39c8ebcdd75fc7521e4611616 378 PRINTS PR00143 Citrate synthase signature 328 342 1.5E-38 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG62_09375 367cebf39c8ebcdd75fc7521e4611616 378 Gene3D G3DSA:1.10.580.10 32 355 1.3E-122 T 23-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CDG62_09375 367cebf39c8ebcdd75fc7521e4611616 378 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 23-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CDG62_11245 9dfdb00d5af8547861b53edbbe79df71 151 Pfam PF01220 Dehydroquinase class II 5 141 4.8E-62 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG62_11245 9dfdb00d5af8547861b53edbbe79df71 151 Gene3D G3DSA:3.40.50.9100 1 150 6.5E-67 T 23-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG62_11245 9dfdb00d5af8547861b53edbbe79df71 151 SUPERFAMILY SSF52304 4 146 3.4E-62 T 23-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG62_11245 9dfdb00d5af8547861b53edbbe79df71 151 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 142 2.0E-65 T 23-10-2018 CDG62_11245 9dfdb00d5af8547861b53edbbe79df71 151 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 151 72.525 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG62_11245 9dfdb00d5af8547861b53edbbe79df71 151 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 23-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG62_11245 9dfdb00d5af8547861b53edbbe79df71 151 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 143 1.6E-61 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG62_11245 9dfdb00d5af8547861b53edbbe79df71 151 PIRSF PIRSF001399 1 148 5.4E-62 T 23-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG62_15985 35d4237c46bdc0d7276f1b50f712461b 480 Gene3D G3DSA:1.20.1740.10 16 479 1.8E-64 T 23-10-2018 CDG62_15985 35d4237c46bdc0d7276f1b50f712461b 480 Pfam PF00324 Amino acid permease 25 468 9.3E-102 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG62_15985 35d4237c46bdc0d7276f1b50f712461b 480 ProSitePatterns PS00218 Amino acid permeases signature. 50 80 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG62_15985 35d4237c46bdc0d7276f1b50f712461b 480 PIRSF PIRSF006060 5 479 9.5E-70 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 Gene3D G3DSA:3.30.450.40 2 168 7.7E-47 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 490 3.0E-23 T 23-10-2018 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 625 640 3.0E-23 T 23-10-2018 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 642 657 3.0E-23 T 23-10-2018 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 678 690 3.0E-23 T 23-10-2018 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 184 735 2.0E-129 T 23-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 Pfam PF00391 PEP-utilising enzyme, mobile domain 331 403 6.4E-17 T 23-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 Pfam PF05524 PEP-utilising enzyme, N-terminal 183 305 1.1E-23 T 23-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 SUPERFAMILY SSF51621 432 725 1.81E-98 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 Pfam PF13185 GAF domain 20 158 3.8E-14 T 23-10-2018 IPR003018 GAF domain GO:0005515 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 Gene3D G3DSA:1.10.274.10 201 325 7.2E-60 T 23-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 SMART SM00065 21 168 6.9E-22 T 23-10-2018 IPR003018 GAF domain GO:0005515 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 Gene3D G3DSA:3.20.20.60 412 752 1.2E-105 T 23-10-2018 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 625 643 - T 23-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 Gene3D G3DSA:3.50.30.10 184 411 7.2E-60 T 23-10-2018 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 431 718 1.4E-96 T 23-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 SUPERFAMILY SSF52009 304 424 2.88E-27 T 23-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 SUPERFAMILY SSF55781 4 162 4.8E-32 T 23-10-2018 CDG62_17200 1a0e42fa43d5b8b7b9bdaad52c50869b 765 SUPERFAMILY SSF47831 209 320 1.31E-25 T 23-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 CDG62_17335 ef14a43183e64f3e2ec78844afe5b67d 329 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 293 61.143 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17335 ef14a43183e64f3e2ec78844afe5b67d 329 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 291 2.7E-153 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17335 ef14a43183e64f3e2ec78844afe5b67d 329 Gene3D G3DSA:1.20.58.180 217 298 1.3E-34 T 23-10-2018 CDG62_17335 ef14a43183e64f3e2ec78844afe5b67d 329 Gene3D G3DSA:3.30.930.10 3 216 4.1E-113 T 23-10-2018 CDG62_17335 ef14a43183e64f3e2ec78844afe5b67d 329 SUPERFAMILY SSF55681 10 292 4.11E-137 T 23-10-2018 CDG62_17335 ef14a43183e64f3e2ec78844afe5b67d 329 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 299 5.0E-163 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17335 ef14a43183e64f3e2ec78844afe5b67d 329 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 1.4E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17335 ef14a43183e64f3e2ec78844afe5b67d 329 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 1.4E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17335 ef14a43183e64f3e2ec78844afe5b67d 329 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 1.4E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17335 ef14a43183e64f3e2ec78844afe5b67d 329 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 1.4E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17335 ef14a43183e64f3e2ec78844afe5b67d 329 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 1.4E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17335 ef14a43183e64f3e2ec78844afe5b67d 329 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 1.4E-69 T 23-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_04935 c301fafc9a55bd99fe2088f717fa8e16 416 Pfam PF03631 Virulence factor BrkB 30 277 3.7E-53 T 23-10-2018 IPR017039 Virulence factor BrkB CDG62_04935 c301fafc9a55bd99fe2088f717fa8e16 416 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 278 9.8E-59 T 23-10-2018 IPR017039 Virulence factor BrkB CDG62_04935 c301fafc9a55bd99fe2088f717fa8e16 416 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 2 302 21.513 T 23-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 Gene3D G3DSA:3.90.740.10 204 421 1.3E-233 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 Pfam PF06827 Zinc finger found in FPG and IleRS 907 934 4.1E-6 T 23-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 Pfam PF08264 Anticodon-binding domain of tRNA 698 853 1.1E-25 T 23-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 24 853 2.3E-277 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 SUPERFAMILY SSF52374 11 661 7.51E-138 T 23-10-2018 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 11 938 21.036 T 23-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 36 650 3.2E-205 T 23-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 Gene3D G3DSA:3.40.50.620 34 642 1.3E-233 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 Gene3D G3DSA:1.10.730.20 653 937 6.9E-86 T 23-10-2018 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 SUPERFAMILY SSF50677 213 416 1.04E-50 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 574 583 1.2E-31 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 60 71 1.2E-31 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 414 429 1.2E-31 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 246 269 1.2E-31 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 540 553 1.2E-31 T 23-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 67 78 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_19070 803dcde6d825ed319bd6ba9bac60fc75 948 SUPERFAMILY SSF47323 665 934 7.48E-71 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_19170 189e6980e005be834be1ceea064b5620 94 Pfam PF14542 GCN5-related N-acetyl-transferase 14 92 2.5E-22 T 23-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase CDG62_19170 189e6980e005be834be1ceea064b5620 94 Gene3D G3DSA:3.40.630.30 5 94 3.4E-26 T 23-10-2018 CDG62_19170 189e6980e005be834be1ceea064b5620 94 SUPERFAMILY SSF55729 3 93 1.74E-23 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_07860 33dad105ddf79a13bc4b9844aa582f71 380 Gene3D G3DSA:2.40.110.10 121 234 3.0E-39 T 23-10-2018 CDG62_07860 33dad105ddf79a13bc4b9844aa582f71 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG62_07860 33dad105ddf79a13bc4b9844aa582f71 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG62_07860 33dad105ddf79a13bc4b9844aa582f71 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 2.0E-22 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG62_07860 33dad105ddf79a13bc4b9844aa582f71 380 Gene3D G3DSA:1.10.540.10 2 120 1.3E-35 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG62_07860 33dad105ddf79a13bc4b9844aa582f71 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 378 2.5E-39 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG62_07860 33dad105ddf79a13bc4b9844aa582f71 380 PIRSF PIRSF016578 6 380 7.6E-18 T 23-10-2018 CDG62_07860 33dad105ddf79a13bc4b9844aa582f71 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 8.1E-34 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG62_07860 33dad105ddf79a13bc4b9844aa582f71 380 Gene3D G3DSA:1.20.140.10 235 380 1.6E-41 T 23-10-2018 CDG62_07860 33dad105ddf79a13bc4b9844aa582f71 380 SUPERFAMILY SSF56645 4 241 2.36E-81 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_07860 33dad105ddf79a13bc4b9844aa582f71 380 SUPERFAMILY SSF47203 228 380 1.24E-44 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_12245 2cf4253198d70a70379fa8d653ceb261 711 ProSitePatterns PS00211 ABC transporters family signature. 612 626 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_12245 2cf4253198d70a70379fa8d653ceb261 711 Gene3D G3DSA:3.90.70.10 4 127 2.0E-15 T 23-10-2018 CDG62_12245 2cf4253198d70a70379fa8d653ceb261 711 SMART SM00382 500 686 1.6E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_12245 2cf4253198d70a70379fa8d653ceb261 711 Gene3D G3DSA:1.20.1560.10 145 456 6.7E-61 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG62_12245 2cf4253198d70a70379fa8d653ceb261 711 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 8 703 3.7E-259 T 23-10-2018 IPR017750 ATPase, type I secretion system CDG62_12245 2cf4253198d70a70379fa8d653ceb261 711 Pfam PF03412 Peptidase C39 family 15 82 1.4E-4 T 23-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CDG62_12245 2cf4253198d70a70379fa8d653ceb261 711 SUPERFAMILY SSF52540 463 700 9.21E-64 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12245 2cf4253198d70a70379fa8d653ceb261 711 Gene3D G3DSA:3.40.50.300 467 710 4.7E-71 T 23-10-2018 CDG62_12245 2cf4253198d70a70379fa8d653ceb261 711 SUPERFAMILY SSF90123 146 459 1.23E-58 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG62_12245 2cf4253198d70a70379fa8d653ceb261 711 Pfam PF00005 ABC transporter 495 640 3.3E-31 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_12245 2cf4253198d70a70379fa8d653ceb261 711 Pfam PF00664 ABC transporter transmembrane region 161 426 1.1E-29 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDG62_03360 1635829f05d413b630df764b34453ab4 179 SUPERFAMILY SSF48452 2 175 9.1E-67 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_03360 1635829f05d413b630df764b34453ab4 179 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 175 1.8E-61 T 23-10-2018 IPR010323 Protein of unknown function DUF924 CDG62_03360 1635829f05d413b630df764b34453ab4 179 Gene3D G3DSA:1.25.40.10 79 179 1.3E-32 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_03360 1635829f05d413b630df764b34453ab4 179 Gene3D G3DSA:1.20.58.320 1 78 6.3E-25 T 23-10-2018 CDG62_04695 5188609c8c17d2a3fed9bb994549e221 212 Gene3D G3DSA:2.40.50.620 34 93 8.7E-14 T 23-10-2018 CDG62_04695 5188609c8c17d2a3fed9bb994549e221 212 Gene3D G3DSA:2.40.30.10 132 212 2.9E-14 T 23-10-2018 CDG62_04695 5188609c8c17d2a3fed9bb994549e221 212 Pfam PF00297 Ribosomal protein L3 61 185 9.5E-14 T 23-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04695 5188609c8c17d2a3fed9bb994549e221 212 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 23-10-2018 IPR019926 Ribosomal protein L3, conserved site CDG62_04695 5188609c8c17d2a3fed9bb994549e221 212 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.463 T 23-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04695 5188609c8c17d2a3fed9bb994549e221 212 SUPERFAMILY SSF50447 2 211 2.47E-77 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG62_04695 5188609c8c17d2a3fed9bb994549e221 212 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 1.1E-85 T 23-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08475 5d13ecefc3e3a1ad6d674d3a19ac5d98 247 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 247 44.412 T 23-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CDG62_08475 5d13ecefc3e3a1ad6d674d3a19ac5d98 247 Pfam PF02654 Cobalamin-5-phosphate synthase 7 237 8.3E-51 T 23-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CDG62_08475 5d13ecefc3e3a1ad6d674d3a19ac5d98 247 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 4 238 9.5E-38 T 23-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 CDG62_08685 320aab5df1d821ca81389fbb15dbde52 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 23-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08685 320aab5df1d821ca81389fbb15dbde52 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 2.5E-35 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08685 320aab5df1d821ca81389fbb15dbde52 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.898 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08685 320aab5df1d821ca81389fbb15dbde52 75 Pfam PF01084 Ribosomal protein S18 18 68 8.8E-24 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08685 320aab5df1d821ca81389fbb15dbde52 75 Gene3D G3DSA:4.10.640.10 1 75 5.2E-27 T 23-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08685 320aab5df1d821ca81389fbb15dbde52 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 9.1E-18 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08685 320aab5df1d821ca81389fbb15dbde52 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 9.1E-18 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08685 320aab5df1d821ca81389fbb15dbde52 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 9.1E-18 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08685 320aab5df1d821ca81389fbb15dbde52 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 9.1E-18 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08685 320aab5df1d821ca81389fbb15dbde52 75 SUPERFAMILY SSF46911 3 74 1.07E-28 T 23-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08685 320aab5df1d821ca81389fbb15dbde52 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 20 71 8.0E-23 T 23-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04540 e507cbd51f90d0dfd286a9b03cad7819 313 SUPERFAMILY SSF102886 8 309 3.66E-125 T 23-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG62_04540 e507cbd51f90d0dfd286a9b03cad7819 313 PRINTS PR00073 Coprogen oxidase signature 38 54 3.1E-75 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG62_04540 e507cbd51f90d0dfd286a9b03cad7819 313 PRINTS PR00073 Coprogen oxidase signature 55 76 3.1E-75 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG62_04540 e507cbd51f90d0dfd286a9b03cad7819 313 PRINTS PR00073 Coprogen oxidase signature 169 198 3.1E-75 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG62_04540 e507cbd51f90d0dfd286a9b03cad7819 313 PRINTS PR00073 Coprogen oxidase signature 132 154 3.1E-75 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG62_04540 e507cbd51f90d0dfd286a9b03cad7819 313 PRINTS PR00073 Coprogen oxidase signature 241 268 3.1E-75 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG62_04540 e507cbd51f90d0dfd286a9b03cad7819 313 PRINTS PR00073 Coprogen oxidase signature 97 121 3.1E-75 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG62_04540 e507cbd51f90d0dfd286a9b03cad7819 313 PRINTS PR00073 Coprogen oxidase signature 269 295 3.1E-75 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG62_04540 e507cbd51f90d0dfd286a9b03cad7819 313 Pfam PF01218 Coproporphyrinogen III oxidase 12 309 1.1E-119 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG62_04540 e507cbd51f90d0dfd286a9b03cad7819 313 PIRSF PIRSF000166 2 310 4.4E-119 T 23-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG62_04540 e507cbd51f90d0dfd286a9b03cad7819 313 Gene3D G3DSA:3.40.1500.10 1 313 3.0E-135 T 23-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG62_04540 e507cbd51f90d0dfd286a9b03cad7819 313 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 173 197 - T 23-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 Gene3D G3DSA:3.30.70.1430 561 656 0.0 T 23-10-2018 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 SUPERFAMILY SSF82693 40 134 6.28E-24 T 23-10-2018 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 Gene3D G3DSA:1.20.1640.10 507 1015 0.0 T 23-10-2018 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 Gene3D G3DSA:3.30.70.1430 40 809 0.0 T 23-10-2018 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 Gene3D G3DSA:3.30.2090.10 178 268 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 Gene3D G3DSA:1.20.1640.10 10 506 0.0 T 23-10-2018 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 Gene3D G3DSA:3.30.2090.10 706 801 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 SUPERFAMILY SSF82693 560 651 1.49E-9 T 23-10-2018 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 SUPERFAMILY SSF82866 290 488 2.22E-45 T 23-10-2018 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 Gene3D G3DSA:3.30.70.1440 657 858 0.0 T 23-10-2018 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 SUPERFAMILY SSF82714 707 799 1.83E-9 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 SUPERFAMILY SSF82693 137 323 1.23E-19 T 23-10-2018 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 Gene3D G3DSA:3.30.70.1320 134 325 0.0 T 23-10-2018 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 Pfam PF00873 AcrB/AcrD/AcrF family 5 1018 1.1E-264 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 SUPERFAMILY SSF82714 182 263 3.4E-14 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 SUPERFAMILY SSF82866 798 1021 9.68E-50 T 23-10-2018 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.7E-59 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 6.7E-59 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 6.7E-59 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 6.7E-59 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 6.7E-59 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 6.7E-59 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 6.7E-59 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_14515 d8d38de2a2b791e75bb1d314003731d3 1034 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.7E-59 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_02740 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF12848 ABC transporter 167 283 5.1E-9 T 23-10-2018 IPR032781 ABC-transporter extension domain CDG62_02740 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF00005 ABC transporter 313 436 5.3E-15 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_02740 5418973fc0e6b837c762acaac063f2e8 491 SUPERFAMILY SSF52540 288 485 2.59E-35 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_02740 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 63 234 1.9E-28 T 23-10-2018 CDG62_02740 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 289 490 2.2E-41 T 23-10-2018 CDG62_02740 5418973fc0e6b837c762acaac063f2e8 491 SUPERFAMILY SSF52540 3 189 1.88E-31 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_02740 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF00005 ABC transporter 24 56 9.4E-6 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_02740 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 4 62 3.7E-8 T 23-10-2018 CDG62_02740 5418973fc0e6b837c762acaac063f2e8 491 SMART SM00382 321 488 4.6E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_02740 5418973fc0e6b837c762acaac063f2e8 491 SMART SM00382 29 173 4.8E-4 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_00455 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF12848 ABC transporter 167 283 5.1E-9 T 23-10-2018 IPR032781 ABC-transporter extension domain CDG62_00455 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF00005 ABC transporter 313 436 5.3E-15 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_00455 5418973fc0e6b837c762acaac063f2e8 491 SUPERFAMILY SSF52540 288 485 2.59E-35 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00455 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 63 234 1.9E-28 T 23-10-2018 CDG62_00455 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 289 490 2.2E-41 T 23-10-2018 CDG62_00455 5418973fc0e6b837c762acaac063f2e8 491 SUPERFAMILY SSF52540 3 189 1.88E-31 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00455 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF00005 ABC transporter 24 56 9.4E-6 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_00455 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 4 62 3.7E-8 T 23-10-2018 CDG62_00455 5418973fc0e6b837c762acaac063f2e8 491 SMART SM00382 321 488 4.6E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_00455 5418973fc0e6b837c762acaac063f2e8 491 SMART SM00382 29 173 4.8E-4 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_08705 386995857c65b22b7e2b028eefa40c8a 292 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 277 1.1E-85 T 23-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CDG62_08705 386995857c65b22b7e2b028eefa40c8a 292 Gene3D G3DSA:1.10.357.140 13 165 1.9E-22 T 23-10-2018 CDG62_08705 386995857c65b22b7e2b028eefa40c8a 292 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 17.218 T 23-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CDG62_08705 386995857c65b22b7e2b028eefa40c8a 292 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 23-10-2018 IPR030470 UbiA prenyltransferase conserved site CDG62_08705 386995857c65b22b7e2b028eefa40c8a 292 Pfam PF01040 UbiA prenyltransferase family 19 267 2.3E-58 T 23-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CDG62_08920 c2b22d835b3d4a97944a8d4ee468d4b8 454 Gene3D G3DSA:1.20.1740.10 10 453 8.0E-64 T 23-10-2018 CDG62_08920 c2b22d835b3d4a97944a8d4ee468d4b8 454 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG62_08920 c2b22d835b3d4a97944a8d4ee468d4b8 454 Pfam PF00324 Amino acid permease 17 452 5.6E-108 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG62_08920 c2b22d835b3d4a97944a8d4ee468d4b8 454 PIRSF PIRSF006060 1 453 2.0E-76 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_16195 67d1a2b99447c0e0dde6578fbb15cd2d 484 Pfam PF04552 Sigma-54, DNA binding domain 324 481 1.5E-67 T 23-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding CDG62_16195 67d1a2b99447c0e0dde6578fbb15cd2d 484 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 48 6.8E-14 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG62_16195 67d1a2b99447c0e0dde6578fbb15cd2d 484 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 462 469 - T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG62_16195 67d1a2b99447c0e0dde6578fbb15cd2d 484 Gene3D G3DSA:1.10.10.60 424 482 2.0E-24 T 23-10-2018 CDG62_16195 67d1a2b99447c0e0dde6578fbb15cd2d 484 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 481 3.5E-151 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG62_16195 67d1a2b99447c0e0dde6578fbb15cd2d 484 PIRSF PIRSF000774 1 483 3.2E-142 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG62_16195 67d1a2b99447c0e0dde6578fbb15cd2d 484 PRINTS PR00045 Sigma-54 factor signature 194 211 1.5E-32 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG62_16195 67d1a2b99447c0e0dde6578fbb15cd2d 484 PRINTS PR00045 Sigma-54 factor signature 383 395 1.5E-32 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG62_16195 67d1a2b99447c0e0dde6578fbb15cd2d 484 PRINTS PR00045 Sigma-54 factor signature 457 475 1.5E-32 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG62_16195 67d1a2b99447c0e0dde6578fbb15cd2d 484 PRINTS PR00045 Sigma-54 factor signature 399 410 1.5E-32 T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG62_16195 67d1a2b99447c0e0dde6578fbb15cd2d 484 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 371 390 - T 23-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 CDG62_16195 67d1a2b99447c0e0dde6578fbb15cd2d 484 Pfam PF04963 Sigma-54 factor, core binding domain 114 310 8.7E-53 T 23-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 CDG62_16195 67d1a2b99447c0e0dde6578fbb15cd2d 484 Gene3D G3DSA:1.10.10.1330 119 256 3.0E-21 T 23-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CDG62_14280 2f2d71b97dde5a98915eda32659a2252 302 PIRSF PIRSF037442 7 295 6.6E-85 T 23-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 CDG62_14280 2f2d71b97dde5a98915eda32659a2252 302 Gene3D G3DSA:3.40.50.1820 5 297 1.8E-24 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_14280 2f2d71b97dde5a98915eda32659a2252 302 Pfam PF12146 Serine aminopeptidase, S33 39 166 3.3E-10 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG62_14280 2f2d71b97dde5a98915eda32659a2252 302 SUPERFAMILY SSF53474 12 295 4.32E-28 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_03500 809923e282a3fef42ee49a94597dc6c9 745 Pfam PF07715 TonB-dependent Receptor Plug Domain 89 186 1.2E-18 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_03500 809923e282a3fef42ee49a94597dc6c9 745 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 92 745 3.4E-90 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDG62_03500 809923e282a3fef42ee49a94597dc6c9 745 Gene3D G3DSA:2.170.130.10 74 196 1.0E-27 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_03500 809923e282a3fef42ee49a94597dc6c9 745 Pfam PF00593 TonB dependent receptor 258 744 1.5E-50 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_03500 809923e282a3fef42ee49a94597dc6c9 745 Gene3D G3DSA:2.40.170.20 197 745 2.4E-101 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_03500 809923e282a3fef42ee49a94597dc6c9 745 SUPERFAMILY SSF56935 84 745 3.97E-117 T 23-10-2018 CDG62_03055 5d80728e275145db51af135f1c74a344 1981 Gene3D G3DSA:2.60.40.10 727 827 2.1E-9 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG62_03055 5d80728e275145db51af135f1c74a344 1981 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 602 649 3.9E-9 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_03055 5d80728e275145db51af135f1c74a344 1981 SUPERFAMILY SSF56925 1849 1962 4.71E-5 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG62_03055 5d80728e275145db51af135f1c74a344 1981 Pfam PF17210 SdrD B-like domain 729 785 1.6E-9 T 23-10-2018 IPR033764 SD-repeat containing protein, B domain CDG62_03055 5d80728e275145db51af135f1c74a344 1981 Pfam PF01345 Domain of unknown function DUF11 601 690 9.8E-10 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_03055 5d80728e275145db51af135f1c74a344 1981 SUPERFAMILY SSF49464 458 529 1.22E-6 T 23-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily CDG62_03055 5d80728e275145db51af135f1c74a344 1981 Gene3D G3DSA:2.60.40.10 432 582 1.9E-5 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG62_03055 5d80728e275145db51af135f1c74a344 1981 SUPERFAMILY SSF117074 716 785 1.96E-8 T 23-10-2018 CDG62_10005 b8b06598a11d7f6cda5c656020366bcc 481 PIRSF PIRSF006060 16 479 1.8E-72 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_10005 b8b06598a11d7f6cda5c656020366bcc 481 TIGRFAM TIGR00908 2A0305: ethanolamine permease 27 470 5.7E-184 T 23-10-2018 IPR004757 Ethanolamine permease CDG62_10005 b8b06598a11d7f6cda5c656020366bcc 481 Pfam PF13520 Amino acid permease 45 449 1.5E-38 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_10005 b8b06598a11d7f6cda5c656020366bcc 481 Gene3D G3DSA:1.20.1740.10 29 473 3.6E-55 T 23-10-2018 CDG62_03170 d33d3a58853dcd28523246a5ac0c972e 184 Gene3D G3DSA:1.10.340.30 3 184 6.5E-72 T 23-10-2018 CDG62_03170 d33d3a58853dcd28523246a5ac0c972e 184 SUPERFAMILY SSF48150 4 183 6.75E-71 T 23-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CDG62_03170 d33d3a58853dcd28523246a5ac0c972e 184 Pfam PF03352 Methyladenine glycosylase 8 183 8.0E-69 T 23-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CDG62_02555 44382e3a99a2dbe31a6ff90daa7f0534 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 3.8E-15 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_02555 44382e3a99a2dbe31a6ff90daa7f0534 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 3.8E-15 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_02555 44382e3a99a2dbe31a6ff90daa7f0534 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 3.8E-15 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_02555 44382e3a99a2dbe31a6ff90daa7f0534 121 Gene3D G3DSA:1.10.1660.10 2 121 2.8E-16 T 23-10-2018 CDG62_02555 44382e3a99a2dbe31a6ff90daa7f0534 121 SMART SM00422 4 73 2.3E-20 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_02555 44382e3a99a2dbe31a6ff90daa7f0534 121 Pfam PF13411 MerR HTH family regulatory protein 4 72 1.4E-11 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_02555 44382e3a99a2dbe31a6ff90daa7f0534 121 SUPERFAMILY SSF46955 4 108 1.36E-16 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily CDG62_02555 44382e3a99a2dbe31a6ff90daa7f0534 121 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 2 119 5.6E-60 T 23-10-2018 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 CDG62_13070 d82692d56abc2071245e8ac7a2948e6a 428 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 22 425 1.9E-151 T 23-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 CDG62_13070 d82692d56abc2071245e8ac7a2948e6a 428 Pfam PF04052 TolB amino-terminal domain 31 125 6.7E-20 T 23-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CDG62_13070 d82692d56abc2071245e8ac7a2948e6a 428 Pfam PF07676 WD40-like Beta Propeller Repeat 236 270 2.1E-7 T 23-10-2018 IPR011659 WD40-like Beta Propeller CDG62_13070 d82692d56abc2071245e8ac7a2948e6a 428 Pfam PF07676 WD40-like Beta Propeller Repeat 201 226 0.0027 T 23-10-2018 IPR011659 WD40-like Beta Propeller CDG62_13070 d82692d56abc2071245e8ac7a2948e6a 428 Pfam PF07676 WD40-like Beta Propeller Repeat 278 314 1.3E-10 T 23-10-2018 IPR011659 WD40-like Beta Propeller CDG62_13070 d82692d56abc2071245e8ac7a2948e6a 428 Pfam PF07676 WD40-like Beta Propeller Repeat 371 395 0.0013 T 23-10-2018 IPR011659 WD40-like Beta Propeller CDG62_13070 d82692d56abc2071245e8ac7a2948e6a 428 Gene3D G3DSA:2.120.10.30 162 428 2.7E-80 T 23-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDG62_13070 d82692d56abc2071245e8ac7a2948e6a 428 SUPERFAMILY SSF69304 151 427 1.29E-51 T 23-10-2018 CDG62_13070 d82692d56abc2071245e8ac7a2948e6a 428 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 11 425 42.026 T 23-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 CDG62_13070 d82692d56abc2071245e8ac7a2948e6a 428 Gene3D G3DSA:3.40.50.10070 26 161 1.5E-34 T 23-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 CDG62_13070 d82692d56abc2071245e8ac7a2948e6a 428 SUPERFAMILY SSF52964 40 158 4.58E-29 T 23-10-2018 CDG62_00395 ba32887db00f314905c1d7bdecbc91a0 2120 SUPERFAMILY SSF52540 1321 1516 5.11E-22 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00395 ba32887db00f314905c1d7bdecbc91a0 2120 SUPERFAMILY SSF53335 90 302 1.14E-26 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_00395 ba32887db00f314905c1d7bdecbc91a0 2120 Gene3D G3DSA:3.40.50.300 1270 1490 3.3E-17 T 23-10-2018 CDG62_00395 ba32887db00f314905c1d7bdecbc91a0 2120 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 2059 2085 - T 23-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 CDG62_00395 ba32887db00f314905c1d7bdecbc91a0 2120 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 184 196 9.4E-6 T 23-10-2018 CDG62_00395 ba32887db00f314905c1d7bdecbc91a0 2120 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 123 137 9.4E-6 T 23-10-2018 CDG62_00395 ba32887db00f314905c1d7bdecbc91a0 2120 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 97 113 9.4E-6 T 23-10-2018 CDG62_00395 ba32887db00f314905c1d7bdecbc91a0 2120 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 212 236 9.4E-6 T 23-10-2018 CDG62_00395 ba32887db00f314905c1d7bdecbc91a0 2120 SUPERFAMILY SSF52540 811 1068 1.06E-17 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00395 ba32887db00f314905c1d7bdecbc91a0 2120 Pfam PF00271 Helicase conserved C-terminal domain 1348 1458 5.9E-6 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_00395 ba32887db00f314905c1d7bdecbc91a0 2120 Pfam PF02384 N-6 DNA Methylase 96 294 1.3E-10 T 23-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CDG62_00395 ba32887db00f314905c1d7bdecbc91a0 2120 Gene3D G3DSA:3.40.50.150 93 310 3.4E-25 T 23-10-2018 CDG62_03965 d18a3d1a84e97a0b1256a3db3e0b3ea8 316 Gene3D G3DSA:3.90.1200.10 104 313 7.1E-53 T 23-10-2018 CDG62_03965 d18a3d1a84e97a0b1256a3db3e0b3ea8 316 SUPERFAMILY SSF56112 5 313 5.1E-57 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_03965 d18a3d1a84e97a0b1256a3db3e0b3ea8 316 Hamap MF_00301 Homoserine kinase [thrB]. 1 316 91.347 T 23-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CDG62_03965 d18a3d1a84e97a0b1256a3db3e0b3ea8 316 Gene3D G3DSA:3.30.200.20 1 101 4.3E-21 T 23-10-2018 CDG62_03965 d18a3d1a84e97a0b1256a3db3e0b3ea8 316 Pfam PF01636 Phosphotransferase enzyme family 28 237 2.6E-20 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase CDG62_14805 5adcd9db186352408b2d7fceeb788675 212 Gene3D G3DSA:3.40.30.10 1 88 1.5E-24 T 23-10-2018 CDG62_14805 5adcd9db186352408b2d7fceeb788675 212 SUPERFAMILY SSF52833 1 91 3.11E-20 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_14805 5adcd9db186352408b2d7fceeb788675 212 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 211 3.5E-86 T 23-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 CDG62_14805 5adcd9db186352408b2d7fceeb788675 212 Pfam PF13410 Glutathione S-transferase, C-terminal domain 139 177 1.1E-7 T 23-10-2018 CDG62_14805 5adcd9db186352408b2d7fceeb788675 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 80 2.2E-13 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG62_14805 5adcd9db186352408b2d7fceeb788675 212 Gene3D G3DSA:1.20.1050.10 89 212 3.9E-51 T 23-10-2018 CDG62_14805 5adcd9db186352408b2d7fceeb788675 212 SUPERFAMILY SSF47616 83 209 8.49E-36 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG62_19080 d76cee8bf675334c70d6b924c6b74c1c 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 12 146 1.3E-17 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG62_19080 d76cee8bf675334c70d6b924c6b74c1c 160 Gene3D G3DSA:3.10.50.40 11 160 1.0E-37 T 23-10-2018 CDG62_19080 d76cee8bf675334c70d6b924c6b74c1c 160 SUPERFAMILY SSF54534 13 149 3.14E-35 T 23-10-2018 CDG62_16455 7cbe8da132d1e78214c798ef30e016cd 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 131 2.1E-39 T 23-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG62_16455 7cbe8da132d1e78214c798ef30e016cd 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 131 4.6E-35 T 23-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG62_16455 7cbe8da132d1e78214c798ef30e016cd 162 Gene3D G3DSA:3.30.70.560 3 151 9.0E-49 T 23-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG62_16455 7cbe8da132d1e78214c798ef30e016cd 162 SUPERFAMILY SSF55083 4 140 4.58E-47 T 23-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG62_16455 7cbe8da132d1e78214c798ef30e016cd 162 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 86 97 - T 23-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG62_11405 0ff6c4981344531f636abcdd09b51c37 699 SMART SM00267 261 433 7.1E-58 T 23-10-2018 IPR000160 GGDEF domain CDG62_11405 0ff6c4981344531f636abcdd09b51c37 699 Gene3D G3DSA:3.30.450.20 141 269 4.0E-15 T 23-10-2018 CDG62_11405 0ff6c4981344531f636abcdd09b51c37 699 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 270 432 1.9E-38 T 23-10-2018 IPR000160 GGDEF domain CDG62_11405 0ff6c4981344531f636abcdd09b51c37 699 Pfam PF00563 EAL domain 455 685 2.2E-60 T 23-10-2018 IPR001633 EAL domain CDG62_11405 0ff6c4981344531f636abcdd09b51c37 699 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 150 268 7.1E-7 T 23-10-2018 IPR000014 PAS domain CDG62_11405 0ff6c4981344531f636abcdd09b51c37 699 SUPERFAMILY SSF55073 277 435 5.57E-45 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_11405 0ff6c4981344531f636abcdd09b51c37 699 SUPERFAMILY SSF141868 453 695 1.05E-67 T 23-10-2018 IPR035919 EAL domain superfamily CDG62_11405 0ff6c4981344531f636abcdd09b51c37 699 Pfam PF08448 PAS fold 154 261 2.3E-11 T 23-10-2018 IPR013656 PAS fold-4 CDG62_11405 0ff6c4981344531f636abcdd09b51c37 699 Gene3D G3DSA:3.30.450.20 29 133 6.0E-7 T 23-10-2018 CDG62_11405 0ff6c4981344531f636abcdd09b51c37 699 Gene3D G3DSA:3.20.20.450 449 697 2.2E-74 T 23-10-2018 IPR035919 EAL domain superfamily CDG62_11405 0ff6c4981344531f636abcdd09b51c37 699 Gene3D G3DSA:3.30.70.270 270 448 3.8E-50 T 23-10-2018 CDG62_11405 0ff6c4981344531f636abcdd09b51c37 699 Pfam PF00990 Diguanylate cyclase, GGDEF domain 274 427 2.2E-46 T 23-10-2018 IPR000160 GGDEF domain CDG62_11405 0ff6c4981344531f636abcdd09b51c37 699 SUPERFAMILY SSF55785 159 270 1.43E-10 T 23-10-2018 IPR035965 PAS domain superfamily CDG62_11405 0ff6c4981344531f636abcdd09b51c37 699 SMART SM00052 443 690 4.4E-68 T 23-10-2018 IPR001633 EAL domain CDG62_07240 2ead9d016c393c21a88c9699e497a8fa 267 Pfam PF05675 Protein of unknown function (DUF817) 9 246 2.0E-81 T 23-10-2018 IPR008535 Protein of unknown function DUF817 CDG62_07240 2ead9d016c393c21a88c9699e497a8fa 267 PIRSF PIRSF009141 1 259 6.0E-72 T 23-10-2018 IPR008535 Protein of unknown function DUF817 CDG62_12635 64649e6e2920dea9665b6ff1b673cbf2 877 Gene3D G3DSA:1.10.8.60 489 577 2.1E-12 T 23-10-2018 CDG62_12635 64649e6e2920dea9665b6ff1b673cbf2 877 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 716 735 6.8E-11 T 23-10-2018 CDG62_12635 64649e6e2920dea9665b6ff1b673cbf2 877 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 100 119 6.8E-11 T 23-10-2018 CDG62_12635 64649e6e2920dea9665b6ff1b673cbf2 877 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 686 705 6.8E-11 T 23-10-2018 CDG62_12635 64649e6e2920dea9665b6ff1b673cbf2 877 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 746 764 6.8E-11 T 23-10-2018 CDG62_12635 64649e6e2920dea9665b6ff1b673cbf2 877 SUPERFAMILY SSF54211 603 795 4.17E-33 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_12635 64649e6e2920dea9665b6ff1b673cbf2 877 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 689 795 1.5E-10 T 23-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CDG62_12635 64649e6e2920dea9665b6ff1b673cbf2 877 Gene3D G3DSA:3.30.230.10 582 818 1.5E-89 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG62_12635 64649e6e2920dea9665b6ff1b673cbf2 877 Gene3D G3DSA:3.40.50.300 45 227 1.7E-28 T 23-10-2018 CDG62_12635 64649e6e2920dea9665b6ff1b673cbf2 877 Gene3D G3DSA:3.40.50.300 269 488 1.9E-56 T 23-10-2018 CDG62_12635 64649e6e2920dea9665b6ff1b673cbf2 877 SUPERFAMILY SSF52540 66 591 2.91E-6 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12635 64649e6e2920dea9665b6ff1b673cbf2 877 Pfam PF13654 AAA domain 64 579 8.9E-170 T 23-10-2018 CDG62_16320 9a596669b61dcb333cd60f20274b1e4a 274 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 268 38.403 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_16320 9a596669b61dcb333cd60f20274b1e4a 274 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 41 52 3.0E-39 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_16320 9a596669b61dcb333cd60f20274b1e4a 274 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 66 84 3.0E-39 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_16320 9a596669b61dcb333cd60f20274b1e4a 274 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 103 3.0E-39 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_16320 9a596669b61dcb333cd60f20274b1e4a 274 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 106 119 3.0E-39 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_16320 9a596669b61dcb333cd60f20274b1e4a 274 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 122 135 3.0E-39 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_16320 9a596669b61dcb333cd60f20274b1e4a 274 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 150 159 3.0E-39 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_16320 9a596669b61dcb333cd60f20274b1e4a 274 SUPERFAMILY SSF52096 9 266 3.27E-83 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_16320 9a596669b61dcb333cd60f20274b1e4a 274 Gene3D G3DSA:3.90.226.10 1 268 9.6E-94 T 23-10-2018 CDG62_16320 9a596669b61dcb333cd60f20274b1e4a 274 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 101 3.2E-44 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_16320 9a596669b61dcb333cd60f20274b1e4a 274 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 7 267 5.7E-113 T 23-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_10165 a0b33f069309bdfadfe6734721783020 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 23-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CDG62_10165 a0b33f069309bdfadfe6734721783020 257 PIRSF PIRSF005902 1 257 4.9E-73 T 23-10-2018 IPR001130 TatD family GO:0016788 CDG62_10165 a0b33f069309bdfadfe6734721783020 257 Pfam PF01026 TatD related DNase 3 254 1.2E-70 T 23-10-2018 IPR001130 TatD family GO:0016788 CDG62_10165 a0b33f069309bdfadfe6734721783020 257 SUPERFAMILY SSF51556 2 256 3.7E-81 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG62_10165 a0b33f069309bdfadfe6734721783020 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 255 1.8E-82 T 23-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CDG62_10165 a0b33f069309bdfadfe6734721783020 257 Gene3D G3DSA:3.20.20.140 1 257 1.1E-85 T 23-10-2018 CDG62_08835 02313d1cdb762444d2c26847fa736673 126 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.3E-28 T 23-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDG62_08835 02313d1cdb762444d2c26847fa736673 126 SUPERFAMILY SSF55620 2 117 5.56E-29 T 23-10-2018 CDG62_08835 02313d1cdb762444d2c26847fa736673 126 SMART SM00905 4 115 1.8E-33 T 23-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDG62_08835 02313d1cdb762444d2c26847fa736673 126 Gene3D G3DSA:3.30.1130.10 1 119 2.8E-31 T 23-10-2018 CDG62_08835 02313d1cdb762444d2c26847fa736673 126 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 114 7.1E-25 T 23-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDG62_08835 02313d1cdb762444d2c26847fa736673 126 TIGRFAM TIGR00526 folB_dom: FolB domain 2 118 1.3E-26 T 23-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CDG62_06605 f52c6c86cf1c011414f54b6636000d3a 684 PIRSF PIRSF015380 1 681 4.3E-171 T 23-10-2018 IPR011385 Putative site-specific recombinase Gcr CDG62_06605 f52c6c86cf1c011414f54b6636000d3a 684 Pfam PF10136 Site-specific recombinase 26 665 6.6E-225 T 23-10-2018 IPR011385 Putative site-specific recombinase Gcr CDG62_04545 d324a5b5f234b46e5838316be79c1c95 454 SUPERFAMILY SSF102114 2 439 3.92E-119 T 23-10-2018 CDG62_04545 d324a5b5f234b46e5838316be79c1c95 454 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 4 454 4.4E-129 T 23-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 CDG62_04545 d324a5b5f234b46e5838316be79c1c95 454 SMART SM00729 51 272 3.5E-39 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG62_04545 d324a5b5f234b46e5838316be79c1c95 454 Pfam PF04055 Radical SAM superfamily 56 227 3.4E-15 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG62_04545 d324a5b5f234b46e5838316be79c1c95 454 Gene3D G3DSA:1.10.10.920 365 454 2.4E-17 T 23-10-2018 CDG62_04545 d324a5b5f234b46e5838316be79c1c95 454 Pfam PF06969 HemN C-terminal domain 364 425 2.1E-9 T 23-10-2018 IPR010723 HemN, C-terminal CDG62_04545 d324a5b5f234b46e5838316be79c1c95 454 Gene3D G3DSA:3.80.30.20 1 364 4.0E-104 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDG62_04545 d324a5b5f234b46e5838316be79c1c95 454 PIRSF PIRSF000167 1 450 3.1E-141 T 23-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 CDG62_17810 8a545499065fad733317f6a37fdd4e93 717 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 496 6.7E-61 T 23-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDG62_17810 8a545499065fad733317f6a37fdd4e93 717 Gene3D G3DSA:3.40.50.720 315 498 1.7E-66 T 23-10-2018 CDG62_17810 8a545499065fad733317f6a37fdd4e93 717 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 495 519 - T 23-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDG62_17810 8a545499065fad733317f6a37fdd4e93 717 SUPERFAMILY SSF48179 626 716 4.76E-24 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_17810 8a545499065fad733317f6a37fdd4e93 717 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 23-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDG62_17810 8a545499065fad733317f6a37fdd4e93 717 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 716 0.0 T 23-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDG62_17810 8a545499065fad733317f6a37fdd4e93 717 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 207 7.8E-37 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDG62_17810 8a545499065fad733317f6a37fdd4e93 717 Gene3D G3DSA:3.90.226.10 1 314 3.1E-95 T 23-10-2018 CDG62_17810 8a545499065fad733317f6a37fdd4e93 717 SUPERFAMILY SSF48179 497 642 1.53E-29 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_17810 8a545499065fad733317f6a37fdd4e93 717 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 498 593 7.5E-23 T 23-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDG62_17810 8a545499065fad733317f6a37fdd4e93 717 SUPERFAMILY SSF51735 314 497 4.03E-56 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_17810 8a545499065fad733317f6a37fdd4e93 717 Gene3D G3DSA:1.10.1040.50 499 711 5.9E-76 T 23-10-2018 CDG62_17810 8a545499065fad733317f6a37fdd4e93 717 SUPERFAMILY SSF52096 6 307 1.53E-64 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_12315 9e548f4ce746c36e4df46623f4706c9c 383 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 11 359 5.9E-111 T 23-10-2018 IPR017439 Amidohydrolase GO:0016787 CDG62_12315 9e548f4ce746c36e4df46623f4706c9c 383 SUPERFAMILY SSF53187 4 374 2.21E-74 T 23-10-2018 CDG62_12315 9e548f4ce746c36e4df46623f4706c9c 383 PIRSF PIRSF005962 1 377 9.0E-116 T 23-10-2018 IPR017439 Amidohydrolase GO:0016787 CDG62_12315 9e548f4ce746c36e4df46623f4706c9c 383 SUPERFAMILY SSF55031 178 283 6.8E-30 T 23-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CDG62_12315 9e548f4ce746c36e4df46623f4706c9c 383 Gene3D G3DSA:3.30.70.360 175 289 4.2E-123 T 23-10-2018 CDG62_12315 9e548f4ce746c36e4df46623f4706c9c 383 Gene3D G3DSA:3.40.630.10 12 358 4.2E-123 T 23-10-2018 CDG62_12315 9e548f4ce746c36e4df46623f4706c9c 383 Pfam PF01546 Peptidase family M20/M25/M40 67 366 8.2E-27 T 23-10-2018 IPR002933 Peptidase M20 GO:0016787 CDG62_12315 9e548f4ce746c36e4df46623f4706c9c 383 Pfam PF07687 Peptidase dimerisation domain 179 273 6.1E-13 T 23-10-2018 IPR011650 Peptidase M20, dimerisation domain CDG62_01880 4b4005e1f5f45f11661f2f79949fb437 279 Pfam PF00809 Pterin binding enzyme 5 248 2.6E-69 T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_01880 4b4005e1f5f45f11661f2f79949fb437 279 Gene3D G3DSA:3.20.20.20 1 270 2.0E-67 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_01880 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 4 19 - T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_01880 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 38 51 - T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_01880 4b4005e1f5f45f11661f2f79949fb437 279 SUPERFAMILY SSF51717 3 265 1.7E-66 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_01880 4b4005e1f5f45f11661f2f79949fb437 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 4 262 4.8E-82 T 23-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CDG62_10595 1fb0737cb3f78398a3d2bfd9a0c6968b 487 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 225 406 3.8E-34 T 23-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CDG62_10595 1fb0737cb3f78398a3d2bfd9a0c6968b 487 SUPERFAMILY SSF55073 223 407 1.33E-54 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_10595 1fb0737cb3f78398a3d2bfd9a0c6968b 487 SMART SM00044 178 388 1.3E-18 T 23-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 CDG62_10595 1fb0737cb3f78398a3d2bfd9a0c6968b 487 Gene3D G3DSA:3.30.70.1230 218 412 3.3E-64 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_02525 a41329ef62e49661ed0527c8d731b0e8 151 SUPERFAMILY SSF46955 8 129 1.68E-29 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily CDG62_02525 a41329ef62e49661ed0527c8d731b0e8 151 SMART SM00422 8 77 1.7E-30 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_02525 a41329ef62e49661ed0527c8d731b0e8 151 Pfam PF00376 MerR family regulatory protein 9 46 1.1E-11 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_02525 a41329ef62e49661ed0527c8d731b0e8 151 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_02525 a41329ef62e49661ed0527c8d731b0e8 151 Pfam PF09278 MerR, DNA binding 51 113 4.3E-18 T 23-10-2018 IPR015358 Transcription regulator MerR, DNA binding CDG62_02525 a41329ef62e49661ed0527c8d731b0e8 151 Gene3D G3DSA:1.10.1660.10 4 131 2.1E-32 T 23-10-2018 CDG62_02525 a41329ef62e49661ed0527c8d731b0e8 151 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 6.3E-56 T 23-10-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 CDG62_02525 a41329ef62e49661ed0527c8d731b0e8 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 3.9E-26 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_02525 a41329ef62e49661ed0527c8d731b0e8 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 3.9E-26 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_02525 a41329ef62e49661ed0527c8d731b0e8 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 3.9E-26 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_06120 9e1136a164590bb885ad0bc4879dc6e6 148 Gene3D G3DSA:3.30.530.20 2 145 1.3E-36 T 23-10-2018 IPR023393 START-like domain superfamily CDG62_06120 9e1136a164590bb885ad0bc4879dc6e6 148 SUPERFAMILY SSF55961 4 143 8.68E-41 T 23-10-2018 CDG62_06120 9e1136a164590bb885ad0bc4879dc6e6 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 138 2.3E-25 T 23-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like CDG62_13160 fa20e70adcfdb5b52e55519aecca7011 822 Pfam PF13567 Domain of unknown function (DUF4131) 29 182 1.7E-7 T 23-10-2018 IPR025405 Domain of unknown function DUF4131 CDG62_13160 fa20e70adcfdb5b52e55519aecca7011 822 Pfam PF03772 Competence protein 237 518 2.5E-54 T 23-10-2018 IPR004477 ComEC/Rec2-related protein CDG62_13160 fa20e70adcfdb5b52e55519aecca7011 822 SUPERFAMILY SSF56281 542 797 1.6E-39 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_13160 fa20e70adcfdb5b52e55519aecca7011 822 Pfam PF00753 Metallo-beta-lactamase superfamily 550 637 1.0E-5 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_13160 fa20e70adcfdb5b52e55519aecca7011 822 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 258 450 1.6E-22 T 23-10-2018 IPR004477 ComEC/Rec2-related protein CDG62_13160 fa20e70adcfdb5b52e55519aecca7011 822 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 87 779 3.6E-89 T 23-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 CDG62_13160 fa20e70adcfdb5b52e55519aecca7011 822 Gene3D G3DSA:3.60.15.10 544 796 6.2E-51 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_00940 15ce979d024f20196870f3f8c0131f51 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 142 2.2E-12 T 23-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDG62_00940 15ce979d024f20196870f3f8c0131f51 212 SUPERFAMILY SSF52540 1 211 3.12E-34 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00940 15ce979d024f20196870f3f8c0131f51 212 Gene3D G3DSA:3.40.50.300 1 211 4.5E-44 T 23-10-2018 CDG62_00940 15ce979d024f20196870f3f8c0131f51 212 PIRSF PIRSF009320 1 210 1.4E-33 T 23-10-2018 CDG62_04750 154284f490969d7adf71a76cb21b6cd0 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 23-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04750 154284f490969d7adf71a76cb21b6cd0 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 7.8E-35 T 23-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04750 154284f490969d7adf71a76cb21b6cd0 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 100 2.6E-19 T 23-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04750 154284f490969d7adf71a76cb21b6cd0 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 95 19.332 T 23-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04750 154284f490969d7adf71a76cb21b6cd0 105 SMART SM00739 3 30 3.1E-6 T 23-10-2018 IPR005824 KOW CDG62_04750 154284f490969d7adf71a76cb21b6cd0 105 Gene3D G3DSA:2.30.30.30 1 102 1.8E-34 T 23-10-2018 IPR014722 Ribosomal protein L2, domain 2 CDG62_04750 154284f490969d7adf71a76cb21b6cd0 105 SUPERFAMILY SSF50104 3 99 3.39E-29 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily CDG62_04750 154284f490969d7adf71a76cb21b6cd0 105 Pfam PF00467 KOW motif 6 34 1.2E-6 T 23-10-2018 IPR005824 KOW CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 Pfam PF00750 tRNA synthetases class I (R) 291 456 1.8E-12 T 23-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 Pfam PF00750 tRNA synthetases class I (R) 101 177 9.7E-10 T 23-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 601 24.362 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 SUPERFAMILY SSF55190 19 111 2.75E-23 T 23-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 Gene3D G3DSA:1.10.730.10 470 601 4.0E-30 T 23-10-2018 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 91 5.4E-22 T 23-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 Pfam PF05746 DALR anticodon binding domain 475 601 1.3E-30 T 23-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 SUPERFAMILY SSF52374 116 484 5.63E-81 T 23-10-2018 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 SMART SM00836 475 601 1.4E-47 T 23-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 SUPERFAMILY SSF47323 469 601 5.89E-29 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 6.4E-19 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 PRINTS PR01038 Arginyl-tRNA synthetase signature 344 365 6.4E-19 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 6.4E-19 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 6.4E-19 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 2 601 4.8E-126 T 23-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 Gene3D G3DSA:3.30.1360.70 1 111 2.9E-24 T 23-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CDG62_18605 45a6bb421cfd0b4eefc1aaa78dd6dba1 601 SMART SM01016 3 91 4.1E-34 T 23-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG62_14815 38c3f0f9d1e21efcc29a01a6f9a22940 355 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 11 322 2.9E-27 T 23-10-2018 CDG62_14815 38c3f0f9d1e21efcc29a01a6f9a22940 355 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 125 133 1.7E-14 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_14815 38c3f0f9d1e21efcc29a01a6f9a22940 355 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 1.7E-14 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_14815 38c3f0f9d1e21efcc29a01a6f9a22940 355 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 164 188 1.7E-14 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_14815 38c3f0f9d1e21efcc29a01a6f9a22940 355 SUPERFAMILY SSF51905 167 353 3.29E-9 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14815 38c3f0f9d1e21efcc29a01a6f9a22940 355 SUPERFAMILY SSF51905 8 205 1.9E-39 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14815 38c3f0f9d1e21efcc29a01a6f9a22940 355 Gene3D G3DSA:3.50.50.60 2 355 2.7E-124 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14815 38c3f0f9d1e21efcc29a01a6f9a22940 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 4.6E-8 T 23-10-2018 CDG62_14815 38c3f0f9d1e21efcc29a01a6f9a22940 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 277 293 4.6E-8 T 23-10-2018 CDG62_14815 38c3f0f9d1e21efcc29a01a6f9a22940 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 4.6E-8 T 23-10-2018 CDG62_08015 989327437c827d29cbf804835ac373b4 439 Gene3D G3DSA:3.40.440.10 6 250 1.1E-97 T 23-10-2018 CDG62_08015 989327437c827d29cbf804835ac373b4 439 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 23-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDG62_08015 989327437c827d29cbf804835ac373b4 439 Gene3D G3DSA:1.10.300.10 102 202 1.1E-97 T 23-10-2018 CDG62_08015 989327437c827d29cbf804835ac373b4 439 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 23-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDG62_08015 989327437c827d29cbf804835ac373b4 439 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 439 203.047 T 23-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDG62_08015 989327437c827d29cbf804835ac373b4 439 Pfam PF00709 Adenylosuccinate synthetase 5 431 1.4E-168 T 23-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDG62_08015 989327437c827d29cbf804835ac373b4 439 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 437 1.9E-170 T 23-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDG62_08015 989327437c827d29cbf804835ac373b4 439 SUPERFAMILY SSF52540 3 438 3.51E-168 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_08015 989327437c827d29cbf804835ac373b4 439 SMART SM00788 4 432 5.3E-279 T 23-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CDG62_08015 989327437c827d29cbf804835ac373b4 439 Gene3D G3DSA:3.90.170.10 268 439 2.8E-62 T 23-10-2018 CDG62_14315 e240981d0d6eabf2b79332848070df54 329 SUPERFAMILY SSF52540 6 196 3.04E-24 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_14315 e240981d0d6eabf2b79332848070df54 329 Gene3D G3DSA:3.40.50.300 3 199 8.7E-45 T 23-10-2018 CDG62_14315 e240981d0d6eabf2b79332848070df54 329 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 181 4.5E-40 T 23-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CDG62_07255 8f1b9c97d40a4f26ff5b43b930b08144 458 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 452 5.6E-45 T 23-10-2018 IPR000160 GGDEF domain CDG62_07255 8f1b9c97d40a4f26ff5b43b930b08144 458 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 447 4.3E-42 T 23-10-2018 IPR000160 GGDEF domain CDG62_07255 8f1b9c97d40a4f26ff5b43b930b08144 458 SUPERFAMILY SSF55073 296 452 2.98E-43 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_07255 8f1b9c97d40a4f26ff5b43b930b08144 458 Pfam PF11563 Protoglobin 28 158 4.3E-15 T 23-10-2018 CDG62_07255 8f1b9c97d40a4f26ff5b43b930b08144 458 Gene3D G3DSA:1.10.490.10 4 153 4.0E-41 T 23-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 CDG62_07255 8f1b9c97d40a4f26ff5b43b930b08144 458 SMART SM00267 279 452 6.7E-47 T 23-10-2018 IPR000160 GGDEF domain CDG62_07255 8f1b9c97d40a4f26ff5b43b930b08144 458 Gene3D G3DSA:3.30.70.270 294 457 1.0E-48 T 23-10-2018 CDG62_07255 8f1b9c97d40a4f26ff5b43b930b08144 458 SUPERFAMILY SSF46458 29 151 2.64E-13 T 23-10-2018 IPR009050 Globin-like superfamily CDG62_04005 32a82d7844b1f0f3edbf96cf4a28049b 243 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 237 35.926 T 23-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CDG62_04005 32a82d7844b1f0f3edbf96cf4a28049b 243 Pfam PF00977 Histidine biosynthesis protein 3 229 5.6E-79 T 23-10-2018 IPR006062 Histidine biosynthesis GO:0000105 CDG62_04005 32a82d7844b1f0f3edbf96cf4a28049b 243 SUPERFAMILY SSF51366 1 235 5.1E-75 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG62_04005 32a82d7844b1f0f3edbf96cf4a28049b 243 Gene3D G3DSA:3.20.20.70 2 241 7.8E-86 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_04005 32a82d7844b1f0f3edbf96cf4a28049b 243 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 233 7.7E-80 T 23-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CDG62_18480 c99b19e34d41656a99e1f263cf432b62 139 SUPERFAMILY SSF46604 87 135 1.49E-10 T 23-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18480 c99b19e34d41656a99e1f263cf432b62 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 1.6E-39 T 23-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18480 c99b19e34d41656a99e1f263cf432b62 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 7.3E-29 T 23-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18480 c99b19e34d41656a99e1f263cf432b62 139 SUPERFAMILY SSF51344 3 85 7.72E-25 T 23-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18480 c99b19e34d41656a99e1f263cf432b62 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 19.387 T 23-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18480 c99b19e34d41656a99e1f263cf432b62 139 Gene3D G3DSA:2.60.15.10 2 89 6.4E-29 T 23-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18480 c99b19e34d41656a99e1f263cf432b62 139 Gene3D G3DSA:1.20.5.440 90 132 1.1E-7 T 23-10-2018 CDG62_18480 c99b19e34d41656a99e1f263cf432b62 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 17 89 5.0E-31 T 23-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 152 163 8.7E-21 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 8.7E-21 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 276 285 8.7E-21 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 288 311 8.7E-21 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 2.1E-29 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 151 168 2.1E-29 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 2.1E-29 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 304 318 2.1E-29 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 280 285 2.1E-29 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 239 248 2.1E-29 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 Gene3D G3DSA:3.40.50.1370 21 321 8.1E-91 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 20 325 40.073 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 Gene3D G3DSA:3.40.50.1370 152 310 8.1E-91 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 SUPERFAMILY SSF53671 19 324 8.64E-93 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 21 323 2.9E-92 T 23-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 164 7.2E-41 T 23-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 66 73 - T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG62_08065 9c96a91934f38572dbd1870b2cc7a79d 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 173 321 3.5E-28 T 23-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CDG62_18920 d58339ba12da1acdd7581573c5e93005 315 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 124 6.0E-22 T 23-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CDG62_18920 d58339ba12da1acdd7581573c5e93005 315 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 151 230 3.4E-14 T 23-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 CDG62_18920 d58339ba12da1acdd7581573c5e93005 315 Gene3D G3DSA:3.40.50.720 1 130 3.4E-30 T 23-10-2018 CDG62_18920 d58339ba12da1acdd7581573c5e93005 315 Gene3D G3DSA:3.30.360.10 131 315 1.4E-63 T 23-10-2018 CDG62_18920 d58339ba12da1acdd7581573c5e93005 315 SUPERFAMILY SSF55347 134 247 1.74E-6 T 23-10-2018 CDG62_18920 d58339ba12da1acdd7581573c5e93005 315 SUPERFAMILY SSF51735 3 172 9.86E-28 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_15475 2746e7742a3ca568468cf9ca96b4da76 565 PIRSF PIRSF001294 1 565 1.1E-206 T 23-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CDG62_15475 2746e7742a3ca568468cf9ca96b4da76 565 Pfam PF03814 Potassium-transporting ATPase A subunit 7 561 1.2E-205 T 23-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CDG62_15475 2746e7742a3ca568468cf9ca96b4da76 565 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 4 563 2.5E-159 T 23-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CDG62_15475 2746e7742a3ca568468cf9ca96b4da76 565 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 563 27.29 T 23-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CDG62_10145 46172eff6026edf39ca5dc18d9c078b8 334 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 24 318 2.1E-68 T 23-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CDG62_10145 46172eff6026edf39ca5dc18d9c078b8 334 SUPERFAMILY SSF52540 51 168 1.6E-12 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10145 46172eff6026edf39ca5dc18d9c078b8 334 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 326 2.9E-96 T 23-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CDG62_10145 46172eff6026edf39ca5dc18d9c078b8 334 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 6 331 33.389 T 23-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 CDG62_00650 bb41eef039986ff9a4ca1070f163198d 102 Gene3D G3DSA:1.10.260.40 4 98 3.1E-9 T 23-10-2018 CDG62_00650 bb41eef039986ff9a4ca1070f163198d 102 SMART SM00530 13 71 1.5E-5 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_00650 bb41eef039986ff9a4ca1070f163198d 102 Pfam PF01381 Helix-turn-helix 14 66 2.7E-7 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_00650 bb41eef039986ff9a4ca1070f163198d 102 SUPERFAMILY SSF47413 8 65 1.26E-7 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 Gene3D G3DSA:2.40.50.140 580 689 1.3E-32 T 23-10-2018 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 8.0E-24 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 248 259 8.0E-24 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 86 97 8.0E-24 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 8.0E-24 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 8.0E-24 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 38 52 8.0E-24 T 23-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 SUPERFAMILY SSF57770 138 172 5.76E-12 T 23-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 Gene3D G3DSA:3.40.50.620 4 382 1.6E-147 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 Pfam PF09334 tRNA synthetases class I (M) 4 394 6.6E-150 T 23-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 4 533 3.0E-168 T 23-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 SUPERFAMILY SSF50249 587 688 4.16E-31 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 557 688 1.5E-40 T 23-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 Pfam PF01588 Putative tRNA binding domain 594 687 7.2E-24 T 23-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 SUPERFAMILY SSF47323 388 546 5.61E-40 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 544 38.875 T 23-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 SUPERFAMILY SSF52374 3 385 7.93E-98 T 23-10-2018 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 Gene3D G3DSA:1.10.730.10 387 525 2.1E-33 T 23-10-2018 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_14590 1c408bfbf24f113b9d53de4ca2daf204 689 Gene3D G3DSA:2.20.28.20 138 172 1.6E-147 T 23-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG62_09175 0104f638385e83251f45967d1869ec12 285 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 22 277 4.5E-114 T 23-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDG62_09175 0104f638385e83251f45967d1869ec12 285 Pfam PF00793 DAHP synthetase I family 14 276 3.5E-71 T 23-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDG62_09175 0104f638385e83251f45967d1869ec12 285 Gene3D G3DSA:3.20.20.70 3 285 8.5E-96 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_09175 0104f638385e83251f45967d1869ec12 285 SUPERFAMILY SSF51569 8 281 7.88E-100 T 23-10-2018 CDG62_09175 0104f638385e83251f45967d1869ec12 285 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 17 279 48.156 T 23-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDG62_12995 b1b1e66086fa4a5541c4b68ac7b2eeb4 251 SUPERFAMILY SSF55469 22 248 1.44E-47 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG62_12995 b1b1e66086fa4a5541c4b68ac7b2eeb4 251 Pfam PF00881 Nitroreductase family 27 228 6.2E-34 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDG62_12995 b1b1e66086fa4a5541c4b68ac7b2eeb4 251 Gene3D G3DSA:3.40.109.10 19 251 1.8E-54 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 Gene3D G3DSA:3.30.70.870 314 598 2.6E-132 T 23-10-2018 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 Pfam PF00009 Elongation factor Tu GTP binding domain 6 202 9.2E-51 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 Gene3D G3DSA:2.40.30.10 207 307 4.5E-36 T 23-10-2018 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 607 3.9E-283 T 23-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 147 6.2E-23 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 Pfam PF03144 Elongation factor Tu domain 2 227 297 4.0E-9 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 Gene3D G3DSA:3.40.50.300 4 206 2.2E-61 T 23-10-2018 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 Gene3D G3DSA:2.40.50.250 491 607 2.6E-132 T 23-10-2018 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 SUPERFAMILY SSF54980 406 521 1.82E-28 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 SUPERFAMILY SSF50447 162 307 1.81E-32 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 Pfam PF00679 Elongation factor G C-terminus 405 485 1.9E-23 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 SUPERFAMILY SSF52540 4 227 2.24E-51 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 SUPERFAMILY SSF54980 310 395 2.19E-15 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 PRINTS PR00315 GTP-binding elongation factor signature 53 61 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 Gene3D G3DSA:3.30.70.240 397 490 2.6E-132 T 23-10-2018 CDG62_05985 2de20c68a2b90671f7ef3a07ef1b829b 612 SMART SM00838 406 491 0.0046 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like CDG62_15100 7465e9d8ecf47811c492c4933280c44f 809 SMART SM00564 730 763 3.4E-4 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_15100 7465e9d8ecf47811c492c4933280c44f 809 SMART SM00564 446 471 65.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_15100 7465e9d8ecf47811c492c4933280c44f 809 SMART SM00564 224 255 0.017 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_15100 7465e9d8ecf47811c492c4933280c44f 809 SMART SM00564 668 702 79.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_15100 7465e9d8ecf47811c492c4933280c44f 809 SMART SM00564 294 326 580.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_15100 7465e9d8ecf47811c492c4933280c44f 809 SMART SM00564 352 393 0.0042 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_15100 7465e9d8ecf47811c492c4933280c44f 809 Pfam PF01011 PQQ enzyme repeat 451 481 3.6E-9 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG62_15100 7465e9d8ecf47811c492c4933280c44f 809 Pfam PF01011 PQQ enzyme repeat 737 773 4.1E-5 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG62_15100 7465e9d8ecf47811c492c4933280c44f 809 Gene3D G3DSA:2.140.10.10 164 571 5.2E-103 T 23-10-2018 CDG62_15100 7465e9d8ecf47811c492c4933280c44f 809 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 18 807 0.0 T 23-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 CDG62_15100 7465e9d8ecf47811c492c4933280c44f 809 SUPERFAMILY SSF50998 172 794 1.44E-140 T 23-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDG62_15100 7465e9d8ecf47811c492c4933280c44f 809 Pfam PF13360 PQQ-like domain 201 390 1.1E-8 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG62_15100 7465e9d8ecf47811c492c4933280c44f 809 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 417 438 - T 23-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CDG62_15100 7465e9d8ecf47811c492c4933280c44f 809 Gene3D G3DSA:2.140.10.10 579 809 2.6E-38 T 23-10-2018 CDG62_17505 1abb2400f816779bf98fcc5989cc3425 317 PRINTS PR00625 DnaJ domain signature 24 39 2.2E-18 T 23-10-2018 IPR001623 DnaJ domain CDG62_17505 1abb2400f816779bf98fcc5989cc3425 317 PRINTS PR00625 DnaJ domain signature 6 24 2.2E-18 T 23-10-2018 IPR001623 DnaJ domain CDG62_17505 1abb2400f816779bf98fcc5989cc3425 317 PRINTS PR00625 DnaJ domain signature 40 60 2.2E-18 T 23-10-2018 IPR001623 DnaJ domain CDG62_17505 1abb2400f816779bf98fcc5989cc3425 317 SUPERFAMILY SSF49493 130 217 4.97E-14 T 23-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CDG62_17505 1abb2400f816779bf98fcc5989cc3425 317 Gene3D G3DSA:1.10.287.110 1 130 2.1E-29 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG62_17505 1abb2400f816779bf98fcc5989cc3425 317 Pfam PF01556 DnaJ C terminal domain 138 291 5.6E-29 T 23-10-2018 IPR002939 Chaperone DnaJ, C-terminal CDG62_17505 1abb2400f816779bf98fcc5989cc3425 317 SUPERFAMILY SSF49493 220 301 3.4E-15 T 23-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CDG62_17505 1abb2400f816779bf98fcc5989cc3425 317 Gene3D G3DSA:2.60.260.20 131 212 1.5E-19 T 23-10-2018 CDG62_17505 1abb2400f816779bf98fcc5989cc3425 317 SUPERFAMILY SSF46565 3 100 1.7E-27 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG62_17505 1abb2400f816779bf98fcc5989cc3425 317 Pfam PF00226 DnaJ domain 4 65 3.0E-23 T 23-10-2018 IPR001623 DnaJ domain CDG62_17505 1abb2400f816779bf98fcc5989cc3425 317 Gene3D G3DSA:2.60.260.20 215 313 4.4E-16 T 23-10-2018 CDG62_17505 1abb2400f816779bf98fcc5989cc3425 317 SMART SM00271 3 60 2.8E-28 T 23-10-2018 IPR001623 DnaJ domain CDG62_07760 6719abccbe72c4ce335d809f8a621676 188 Gene3D G3DSA:1.10.357.10 1 184 9.3E-40 T 23-10-2018 CDG62_07760 6719abccbe72c4ce335d809f8a621676 188 SUPERFAMILY SSF48498 79 173 1.43E-10 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG62_07760 6719abccbe72c4ce335d809f8a621676 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 2.0E-12 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_07760 6719abccbe72c4ce335d809f8a621676 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 8.6E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_07760 6719abccbe72c4ce335d809f8a621676 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 8.6E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_07760 6719abccbe72c4ce335d809f8a621676 188 SUPERFAMILY SSF46689 3 68 1.49E-14 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_10885 5da6d92536f88032c05dc100b523270d 414 Gene3D G3DSA:3.50.50.60 104 407 1.3E-38 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_10885 5da6d92536f88032c05dc100b523270d 414 SUPERFAMILY SSF51905 1 410 3.5E-42 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_10885 5da6d92536f88032c05dc100b523270d 414 Pfam PF01266 FAD dependent oxidoreductase 3 405 1.7E-57 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDG62_10885 5da6d92536f88032c05dc100b523270d 414 Gene3D G3DSA:3.30.9.10 133 368 1.3E-38 T 23-10-2018 CDG62_10885 5da6d92536f88032c05dc100b523270d 414 Gene3D G3DSA:3.50.50.60 4 52 1.0E-11 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_10885 5da6d92536f88032c05dc100b523270d 414 SUPERFAMILY SSF54373 277 369 6.67E-9 T 23-10-2018 CDG62_04725 93a17dffc7bd0cc01791b45a226eeee3 250 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.7E-41 T 23-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04725 93a17dffc7bd0cc01791b45a226eeee3 250 Pfam PF07650 KH domain 39 110 2.4E-18 T 23-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04725 93a17dffc7bd0cc01791b45a226eeee3 250 SUPERFAMILY SSF54821 108 206 3.14E-40 T 23-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04725 93a17dffc7bd0cc01791b45a226eeee3 250 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 5.7E-95 T 23-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CDG62_04725 93a17dffc7bd0cc01791b45a226eeee3 250 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.219 T 23-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CDG62_04725 93a17dffc7bd0cc01791b45a226eeee3 250 SUPERFAMILY SSF54814 2 106 1.52E-35 T 23-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CDG62_04725 93a17dffc7bd0cc01791b45a226eeee3 250 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 23-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04725 93a17dffc7bd0cc01791b45a226eeee3 250 Gene3D G3DSA:3.30.1140.32 108 208 4.5E-45 T 23-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04725 93a17dffc7bd0cc01791b45a226eeee3 250 SMART SM00322 60 125 8.0E-5 T 23-10-2018 IPR004087 K Homology domain GO:0003676 CDG62_04725 93a17dffc7bd0cc01791b45a226eeee3 250 Gene3D G3DSA:3.30.300.20 18 107 1.3E-26 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG62_05785 92132569bb2c25682882183b308f6421 119 SUPERFAMILY SSF103196 12 112 2.41E-5 T 23-10-2018 CDG62_05785 92132569bb2c25682882183b308f6421 119 Gene3D G3DSA:3.30.450.30 3 116 2.2E-5 T 23-10-2018 CDG62_09415 febf051611573196317410dc1f3446e3 489 SUPERFAMILY SSF53613 219 484 1.12E-56 T 23-10-2018 IPR029056 Ribokinase-like CDG62_09415 febf051611573196317410dc1f3446e3 489 Pfam PF03853 YjeF-related protein N-terminus 27 185 2.2E-32 T 23-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CDG62_09415 febf051611573196317410dc1f3446e3 489 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 8 201 1.2E-29 T 23-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CDG62_09415 febf051611573196317410dc1f3446e3 489 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 215 488 18.931 T 23-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CDG62_09415 febf051611573196317410dc1f3446e3 489 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 223 485 6.7E-56 T 23-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CDG62_09415 febf051611573196317410dc1f3446e3 489 PIRSF PIRSF017184 3 488 5.4E-97 T 23-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CDG62_09415 febf051611573196317410dc1f3446e3 489 SUPERFAMILY SSF64153 5 237 7.19E-50 T 23-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 CDG62_09415 febf051611573196317410dc1f3446e3 489 Pfam PF01256 Carbohydrate kinase 238 479 9.5E-44 T 23-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CDG62_09415 febf051611573196317410dc1f3446e3 489 Gene3D G3DSA:3.40.1190.20 219 485 1.2E-67 T 23-10-2018 IPR029056 Ribokinase-like CDG62_09415 febf051611573196317410dc1f3446e3 489 Gene3D G3DSA:3.40.50.10260 2 209 3.4E-47 T 23-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 CDG62_03835 24986391d8729a19a59a822e4bda7609 293 PIRSF PIRSF006232 3 291 5.0E-87 T 23-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CDG62_03835 24986391d8729a19a59a822e4bda7609 293 Gene3D G3DSA:2.60.120.10 17 280 2.3E-81 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG62_03835 24986391d8729a19a59a822e4bda7609 293 Gene3D G3DSA:2.60.120.10 149 254 2.3E-81 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG62_03835 24986391d8729a19a59a822e4bda7609 293 Pfam PF02678 Pirin 22 127 5.5E-31 T 23-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CDG62_03835 24986391d8729a19a59a822e4bda7609 293 Pfam PF05726 Pirin C-terminal cupin domain 183 285 9.7E-27 T 23-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 CDG62_03835 24986391d8729a19a59a822e4bda7609 293 SUPERFAMILY SSF51182 3 288 4.45E-80 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG62_15745 e3a7573ac5b2a3e16167b756a7e52636 383 Gene3D G3DSA:1.10.287.470 100 138 3.6E-12 T 23-10-2018 CDG62_15745 e3a7573ac5b2a3e16167b756a7e52636 383 Gene3D G3DSA:1.10.287.470 140 214 9.1E-12 T 23-10-2018 CDG62_15745 e3a7573ac5b2a3e16167b756a7e52636 383 Gene3D G3DSA:2.40.30.170 263 383 8.1E-32 T 23-10-2018 CDG62_15745 e3a7573ac5b2a3e16167b756a7e52636 383 SUPERFAMILY SSF111369 196 303 1.96E-11 T 23-10-2018 CDG62_15745 e3a7573ac5b2a3e16167b756a7e52636 383 Pfam PF00529 HlyD membrane-fusion protein of T1SS 42 379 2.7E-15 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG62_15745 e3a7573ac5b2a3e16167b756a7e52636 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 77 97 3.0E-6 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG62_15745 e3a7573ac5b2a3e16167b756a7e52636 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 262 283 3.0E-6 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG62_15745 e3a7573ac5b2a3e16167b756a7e52636 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 368 383 3.0E-6 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG62_15745 e3a7573ac5b2a3e16167b756a7e52636 383 Gene3D G3DSA:2.40.50.100 65 99 3.6E-12 T 23-10-2018 CDG62_15745 e3a7573ac5b2a3e16167b756a7e52636 383 SUPERFAMILY SSF111369 63 162 9.81E-12 T 23-10-2018 CDG62_15745 e3a7573ac5b2a3e16167b756a7e52636 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 185 322 9.8E-15 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Pfam PF04997 RNA polymerase Rpb1, domain 1 21 347 1.3E-88 T 23-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 349 389 1.3E-7 T 23-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 490 1.2E-27 T 23-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 18 1373 19.046 T 23-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Pfam PF05000 RNA polymerase Rpb1, domain 4 679 768 1.6E-19 T 23-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Gene3D G3DSA:1.10.150.390 1312 1372 3.3E-27 T 23-10-2018 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 SUPERFAMILY SSF64484 21 1362 0.0 T 23-10-2018 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Gene3D G3DSA:1.10.1790.20 1131 1310 5.0E-65 T 23-10-2018 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Gene3D G3DSA:2.40.50.100 1147 1211 5.0E-65 T 23-10-2018 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Pfam PF04983 RNA polymerase Rpb1, domain 3 494 649 5.1E-29 T 23-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 SMART SM00663 240 519 1.4E-178 T 23-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 25 1362 0.0 T 23-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Gene3D G3DSA:1.10.274.100 495 645 1.5E-41 T 23-10-2018 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Gene3D G3DSA:2.40.50.100 1028 1122 1.0E-20 T 23-10-2018 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Gene3D G3DSA:1.10.132.30 646 795 2.8E-66 T 23-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Pfam PF04998 RNA polymerase Rpb1, domain 5 771 1312 1.5E-76 T 23-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Gene3D G3DSA:1.10.40.90 379 421 2.1E-20 T 23-10-2018 CDG62_17925 ec2d1c9c3572f5a5dfd7931f5236941e 1399 Gene3D G3DSA:2.40.50.100 953 1027 2.6E-26 T 23-10-2018 CDG62_14800 92a1825b828f56df8313bbcc51f87f7e 427 Pfam PF09298 Fumarylacetoacetase N-terminal 20 122 1.0E-30 T 23-10-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 CDG62_14800 92a1825b828f56df8313bbcc51f87f7e 427 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 128 416 1.5E-56 T 23-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDG62_14800 92a1825b828f56df8313bbcc51f87f7e 427 SUPERFAMILY SSF63433 6 122 6.02E-36 T 23-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 CDG62_14800 92a1825b828f56df8313bbcc51f87f7e 427 Gene3D G3DSA:2.30.30.230 1 119 1.3E-38 T 23-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 CDG62_14800 92a1825b828f56df8313bbcc51f87f7e 427 Gene3D G3DSA:3.90.850.10 120 422 4.8E-128 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDG62_14800 92a1825b828f56df8313bbcc51f87f7e 427 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 7 421 6.8E-180 T 23-10-2018 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 CDG62_14800 92a1825b828f56df8313bbcc51f87f7e 427 SUPERFAMILY SSF56529 124 420 9.55E-103 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDG62_15455 2376ebad754d51b7b91357f305761f50 236 Gene3D G3DSA:1.10.10.10 135 235 2.9E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15455 2376ebad754d51b7b91357f305761f50 236 SMART SM00862 154 230 2.4E-18 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_15455 2376ebad754d51b7b91357f305761f50 236 Gene3D G3DSA:3.40.50.2300 1 134 2.9E-35 T 23-10-2018 CDG62_15455 2376ebad754d51b7b91357f305761f50 236 SUPERFAMILY SSF52172 8 188 1.71E-39 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_15455 2376ebad754d51b7b91357f305761f50 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 1.0E-19 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_15455 2376ebad754d51b7b91357f305761f50 236 SMART SM00448 9 119 5.5E-36 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_15455 2376ebad754d51b7b91357f305761f50 236 Pfam PF00072 Response regulator receiver domain 11 120 3.9E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_13880 899a4c725221771e2d3836d7a983b45c 160 Pfam PF02590 Predicted SPOUT methyltransferase 1 157 1.1E-50 T 23-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CDG62_13880 899a4c725221771e2d3836d7a983b45c 160 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 158 1.3E-51 T 23-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CDG62_13880 899a4c725221771e2d3836d7a983b45c 160 PIRSF PIRSF004505 1 158 8.0E-51 T 23-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CDG62_13880 899a4c725221771e2d3836d7a983b45c 160 Gene3D G3DSA:3.40.1280.10 1 158 1.8E-52 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG62_13880 899a4c725221771e2d3836d7a983b45c 160 SUPERFAMILY SSF75217 1 156 1.52E-50 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG62_13880 899a4c725221771e2d3836d7a983b45c 160 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 158 27.807 T 23-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 CDG62_07105 ea0806b622a8519428fc1216815b9cbb 442 Pfam PF03471 Transporter associated domain 350 427 1.2E-21 T 23-10-2018 IPR005170 Transporter-associated domain CDG62_07105 ea0806b622a8519428fc1216815b9cbb 442 SUPERFAMILY SSF54631 201 336 1.46E-23 T 23-10-2018 CDG62_07105 ea0806b622a8519428fc1216815b9cbb 442 Gene3D G3DSA:3.10.580.10 195 349 3.0E-34 T 23-10-2018 CDG62_07105 ea0806b622a8519428fc1216815b9cbb 442 SMART SM01091 349 429 3.9E-29 T 23-10-2018 IPR005170 Transporter-associated domain CDG62_07105 ea0806b622a8519428fc1216815b9cbb 442 Pfam PF00571 CBS domain 286 331 3.3E-6 T 23-10-2018 IPR000644 CBS domain CDG62_07105 ea0806b622a8519428fc1216815b9cbb 442 Gene3D G3DSA:3.30.465.10 350 429 5.0E-31 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG62_07105 ea0806b622a8519428fc1216815b9cbb 442 SUPERFAMILY SSF56176 347 430 1.83E-22 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG62_07105 ea0806b622a8519428fc1216815b9cbb 442 Pfam PF01595 Domain of unknown function DUF21 9 199 1.0E-37 T 23-10-2018 IPR002550 CNNM, transmembrane domain CDG62_07105 ea0806b622a8519428fc1216815b9cbb 442 SMART SM00116 223 272 5.2 T 23-10-2018 IPR000644 CBS domain CDG62_07105 ea0806b622a8519428fc1216815b9cbb 442 SMART SM00116 287 335 1.9 T 23-10-2018 IPR000644 CBS domain CDG62_06830 695dc9d3faa19df7224f95e34fae65a2 327 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 7 251 36.125 T 23-10-2018 IPR017689 Outer membrane protein assembly factor BamD CDG62_06830 695dc9d3faa19df7224f95e34fae65a2 327 SUPERFAMILY SSF48452 42 128 2.35E-10 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_06830 695dc9d3faa19df7224f95e34fae65a2 327 Pfam PF13525 Outer membrane lipoprotein 39 242 3.5E-60 T 23-10-2018 IPR039565 Outer membrane lipoprotein BamD-like CDG62_06830 695dc9d3faa19df7224f95e34fae65a2 327 Gene3D G3DSA:1.25.40.10 39 260 2.9E-54 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_06830 695dc9d3faa19df7224f95e34fae65a2 327 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 253 2.0E-78 T 23-10-2018 IPR017689 Outer membrane protein assembly factor BamD CDG62_17600 8dd3034a40b4fa20340e36011d61e2e0 260 Gene3D G3DSA:1.10.287.1080 149 249 9.4E-28 T 23-10-2018 CDG62_17600 8dd3034a40b4fa20340e36011d61e2e0 260 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 32 106 6.0E-34 T 23-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CDG62_17600 8dd3034a40b4fa20340e36011d61e2e0 260 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 248 34.347 T 23-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 CDG62_17600 8dd3034a40b4fa20340e36011d61e2e0 260 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 6 110 32.033 T 23-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CDG62_17600 8dd3034a40b4fa20340e36011d61e2e0 260 Gene3D G3DSA:3.10.20.400 2 97 1.7E-38 T 23-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 CDG62_17600 8dd3034a40b4fa20340e36011d61e2e0 260 SUPERFAMILY SSF101386 152 247 1.79E-22 T 23-10-2018 CDG62_17600 8dd3034a40b4fa20340e36011d61e2e0 260 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 55 109 5.0E-26 T 23-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CDG62_17600 8dd3034a40b4fa20340e36011d61e2e0 260 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 150 243 20.246 T 23-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CDG62_17600 8dd3034a40b4fa20340e36011d61e2e0 260 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 157 246 6.0E-14 T 23-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 CDG62_17600 8dd3034a40b4fa20340e36011d61e2e0 260 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 153 243 1.6E-26 T 23-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CDG62_17600 8dd3034a40b4fa20340e36011d61e2e0 260 SUPERFAMILY SSF141734 4 122 1.16E-48 T 23-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 CDG62_03240 3d17bd055fe2c862537204dae4d52cca 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 257 2.1E-61 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG62_03240 3d17bd055fe2c862537204dae4d52cca 261 SUPERFAMILY SSF53850 6 259 2.99E-67 T 23-10-2018 CDG62_03240 3d17bd055fe2c862537204dae4d52cca 261 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 10 256 1.6E-82 T 23-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 CDG62_03240 3d17bd055fe2c862537204dae4d52cca 261 Gene3D G3DSA:3.40.190.10 32 255 4.3E-79 T 23-10-2018 CDG62_03240 3d17bd055fe2c862537204dae4d52cca 261 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 53 66 - T 23-10-2018 IPR018313 Solute-binding protein family 3, conserved site CDG62_03240 3d17bd055fe2c862537204dae4d52cca 261 SMART SM00062 30 259 1.4E-67 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG62_03240 3d17bd055fe2c862537204dae4d52cca 261 Gene3D G3DSA:3.40.190.10 116 216 4.3E-79 T 23-10-2018 CDG62_12745 7f68a3d54c1e352c44cadd8b4c0721f1 485 Gene3D G3DSA:3.40.50.720 133 467 2.3E-115 T 23-10-2018 CDG62_12745 7f68a3d54c1e352c44cadd8b4c0721f1 485 SUPERFAMILY SSF55347 292 455 9.23E-55 T 23-10-2018 CDG62_12745 7f68a3d54c1e352c44cadd8b4c0721f1 485 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 290 297 - T 23-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_12745 7f68a3d54c1e352c44cadd8b4c0721f1 485 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 133 466 4.6E-112 T 23-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_12745 7f68a3d54c1e352c44cadd8b4c0721f1 485 Gene3D G3DSA:3.30.360.10 291 456 2.3E-115 T 23-10-2018 CDG62_12745 7f68a3d54c1e352c44cadd8b4c0721f1 485 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 297 454 1.7E-47 T 23-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_12745 7f68a3d54c1e352c44cadd8b4c0721f1 485 SUPERFAMILY SSF51735 132 308 1.55E-45 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_12745 7f68a3d54c1e352c44cadd8b4c0721f1 485 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 132 242 5.7E-22 T 23-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_12745 7f68a3d54c1e352c44cadd8b4c0721f1 485 SMART SM00846 131 292 1.1E-53 T 23-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_12745 7f68a3d54c1e352c44cadd8b4c0721f1 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 250 263 8.8E-20 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_12745 7f68a3d54c1e352c44cadd8b4c0721f1 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 313 329 8.8E-20 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_12745 7f68a3d54c1e352c44cadd8b4c0721f1 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 286 304 8.8E-20 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_12745 7f68a3d54c1e352c44cadd8b4c0721f1 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 369 386 8.8E-20 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_12745 7f68a3d54c1e352c44cadd8b4c0721f1 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 410 425 8.8E-20 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 Gene3D G3DSA:3.30.390.30 338 450 2.6E-46 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 Gene3D G3DSA:3.50.50.60 144 261 6.8E-118 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 Gene3D G3DSA:3.50.50.60 5 318 6.8E-118 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.1E-33 T 23-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 SUPERFAMILY SSF51905 3 370 2.96E-54 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.3E-25 T 23-10-2018 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 4.3E-25 T 23-10-2018 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 4.3E-25 T 23-10-2018 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 4.3E-25 T 23-10-2018 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 4.3E-25 T 23-10-2018 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.8E-66 T 23-10-2018 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.8E-66 T 23-10-2018 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 1.8E-66 T 23-10-2018 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.8E-66 T 23-10-2018 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.8E-66 T 23-10-2018 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 1.8E-66 T 23-10-2018 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.8E-66 T 23-10-2018 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 1.8E-66 T 23-10-2018 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.8E-66 T 23-10-2018 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 SUPERFAMILY SSF55424 336 450 1.63E-34 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 318 9.3E-65 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 PIRSF PIRSF000350 1 447 5.5E-82 T 23-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 1.6E-214 T 23-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 CDG62_01720 ca61faa082c278097f95bc8707eb2a73 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 23-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CDG62_09010 a42c8cef1a6f80e1eb20c6a3782ee1a6 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 239 9.6E-38 T 23-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDG62_09010 a42c8cef1a6f80e1eb20c6a3782ee1a6 398 SUPERFAMILY SSF55347 127 274 1.11E-59 T 23-10-2018 CDG62_09010 a42c8cef1a6f80e1eb20c6a3782ee1a6 398 Gene3D G3DSA:1.10.1740.10 312 397 1.6E-30 T 23-10-2018 CDG62_09010 a42c8cef1a6f80e1eb20c6a3782ee1a6 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 133 7.1E-41 T 23-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDG62_09010 a42c8cef1a6f80e1eb20c6a3782ee1a6 398 Gene3D G3DSA:3.40.50.720 1 151 4.2E-53 T 23-10-2018 CDG62_09010 a42c8cef1a6f80e1eb20c6a3782ee1a6 398 SUPERFAMILY SSF69055 302 393 1.11E-30 T 23-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDG62_09010 a42c8cef1a6f80e1eb20c6a3782ee1a6 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 3.0E-42 T 23-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDG62_09010 a42c8cef1a6f80e1eb20c6a3782ee1a6 398 PIRSF PIRSF006205 2 397 3.1E-148 T 23-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDG62_09010 a42c8cef1a6f80e1eb20c6a3782ee1a6 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 395 1.5E-143 T 23-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDG62_09010 a42c8cef1a6f80e1eb20c6a3782ee1a6 398 SUPERFAMILY SSF51735 3 151 8.71E-41 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_09010 a42c8cef1a6f80e1eb20c6a3782ee1a6 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 392 44.645 T 23-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 CDG62_07555 ba31717dbea5db13ff0b58774889267e 333 Gene3D G3DSA:1.10.530.10 76 327 1.1E-92 T 23-10-2018 CDG62_07555 ba31717dbea5db13ff0b58774889267e 333 SUPERFAMILY SSF53955 21 331 5.2E-81 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG62_07555 ba31717dbea5db13ff0b58774889267e 333 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 40 330 1.9E-93 T 23-10-2018 IPR011757 Lytic transglycosylase MltB CDG62_07555 ba31717dbea5db13ff0b58774889267e 333 Pfam PF13406 Transglycosylase SLT domain 39 327 3.1E-86 T 23-10-2018 IPR031304 Transglycosylase SLT domain 2 CDG62_07555 ba31717dbea5db13ff0b58774889267e 333 Gene3D G3DSA:1.10.8.350 43 209 1.1E-92 T 23-10-2018 CDG62_16055 5a9e6165e88337ca7d6ff1f15a32707e 643 Gene3D G3DSA:2.60.40.420 14 144 1.6E-36 T 23-10-2018 IPR008972 Cupredoxin CDG62_16055 5a9e6165e88337ca7d6ff1f15a32707e 643 SUPERFAMILY SSF49503 156 358 3.35E-41 T 23-10-2018 IPR008972 Cupredoxin CDG62_16055 5a9e6165e88337ca7d6ff1f15a32707e 643 Pfam PF07732 Multicopper oxidase 35 146 3.1E-34 T 23-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CDG62_16055 5a9e6165e88337ca7d6ff1f15a32707e 643 ProSitePatterns PS00080 Multicopper oxidases signature 2. 594 605 - T 23-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 CDG62_16055 5a9e6165e88337ca7d6ff1f15a32707e 643 Pfam PF00394 Multicopper oxidase 159 331 2.2E-26 T 23-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 CDG62_16055 5a9e6165e88337ca7d6ff1f15a32707e 643 Gene3D G3DSA:2.60.40.420 152 364 1.8E-36 T 23-10-2018 IPR008972 Cupredoxin CDG62_16055 5a9e6165e88337ca7d6ff1f15a32707e 643 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 24 611 1.4E-191 T 23-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 CDG62_16055 5a9e6165e88337ca7d6ff1f15a32707e 643 Gene3D G3DSA:2.60.40.420 475 617 5.1E-32 T 23-10-2018 IPR008972 Cupredoxin CDG62_16055 5a9e6165e88337ca7d6ff1f15a32707e 643 ProSitePatterns PS00079 Multicopper oxidases signature 1. 589 609 - T 23-10-2018 IPR033138 Multicopper oxidases, conserved site CDG62_16055 5a9e6165e88337ca7d6ff1f15a32707e 643 SUPERFAMILY SSF49503 22 174 7.4E-34 T 23-10-2018 IPR008972 Cupredoxin CDG62_16055 5a9e6165e88337ca7d6ff1f15a32707e 643 Pfam PF07731 Multicopper oxidase 503 612 1.2E-25 T 23-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CDG62_16055 5a9e6165e88337ca7d6ff1f15a32707e 643 SUPERFAMILY SSF49503 497 613 2.06E-33 T 23-10-2018 IPR008972 Cupredoxin CDG62_13820 5d02358976359284311b6548bb8c61c9 573 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_13820 5d02358976359284311b6548bb8c61c9 573 Gene3D G3DSA:2.40.50.100 505 572 1.0E-18 T 23-10-2018 CDG62_13820 5d02358976359284311b6548bb8c61c9 573 SMART SM00878 336 443 9.8E-52 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_13820 5d02358976359284311b6548bb8c61c9 573 SUPERFAMILY SSF51230 502 572 4.32E-15 T 23-10-2018 IPR011053 Single hybrid motif CDG62_13820 5d02358976359284311b6548bb8c61c9 573 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 4.1E-35 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_13820 5d02358976359284311b6548bb8c61c9 573 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 6.2E-41 T 23-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_13820 5d02358976359284311b6548bb8c61c9 573 SUPERFAMILY SSF51246 333 446 4.03E-35 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDG62_13820 5d02358976359284311b6548bb8c61c9 573 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 324 9.8E-76 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_13820 5d02358976359284311b6548bb8c61c9 573 Gene3D G3DSA:3.30.470.130 1 449 4.1E-175 T 23-10-2018 CDG62_13820 5d02358976359284311b6548bb8c61c9 573 SUPERFAMILY SSF56059 84 326 4.24E-59 T 23-10-2018 CDG62_13820 5d02358976359284311b6548bb8c61c9 573 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 530 547 - T 23-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_13820 5d02358976359284311b6548bb8c61c9 573 SUPERFAMILY SSF52440 3 114 7.19E-43 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG62_13820 5d02358976359284311b6548bb8c61c9 573 Pfam PF00364 Biotin-requiring enzyme 514 572 4.8E-13 T 23-10-2018 IPR000089 Biotin/lipoyl attachment CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 Gene3D G3DSA:3.30.70.100 1 69 1.5E-20 T 23-10-2018 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 Gene3D G3DSA:3.50.50.60 228 344 1.8E-117 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 TIGRFAM TIGR02053 MerA: mercury(II) reductase 83 544 1.4E-187 T 23-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 SUPERFAMILY SSF51905 83 409 4.71E-53 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 Gene3D G3DSA:3.30.390.30 419 544 7.2E-47 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 116 126 - T 23-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 PRINTS PR00945 Mercuric reductase class II signature 93 111 7.6E-93 T 23-10-2018 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 PRINTS PR00945 Mercuric reductase class II signature 220 237 7.6E-93 T 23-10-2018 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 PRINTS PR00945 Mercuric reductase class II signature 255 272 7.6E-93 T 23-10-2018 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 PRINTS PR00945 Mercuric reductase class II signature 452 472 7.6E-93 T 23-10-2018 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 PRINTS PR00945 Mercuric reductase class II signature 517 536 7.6E-93 T 23-10-2018 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 PRINTS PR00945 Mercuric reductase class II signature 275 290 7.6E-93 T 23-10-2018 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 PRINTS PR00945 Mercuric reductase class II signature 128 147 7.6E-93 T 23-10-2018 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 PRINTS PR00945 Mercuric reductase class II signature 13 23 7.6E-93 T 23-10-2018 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 PIRSF PIRSF000350 1 544 2.1E-262 T 23-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 SUPERFAMILY SSF55424 419 542 3.09E-33 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 Pfam PF00403 Heavy-metal-associated domain 5 63 5.5E-10 T 23-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 83 401 5.4E-64 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 SUPERFAMILY SSF55008 2 70 3.93E-18 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 23-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 Gene3D G3DSA:3.50.50.60 85 402 1.8E-117 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_02545 3642fe2ae69aa796a19384423effc71b 544 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 420 528 2.0E-29 T 23-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CDG62_05770 2e32171fdf2008292318554c53547368 135 SUPERFAMILY SSF103196 20 132 3.14E-15 T 23-10-2018 CDG62_05770 2e32171fdf2008292318554c53547368 135 SMART SM00960 19 110 7.6E-5 T 23-10-2018 IPR004942 Roadblock/LAMTOR2 domain CDG62_05770 2e32171fdf2008292318554c53547368 135 Pfam PF03259 Roadblock/LC7 domain 20 98 4.5E-7 T 23-10-2018 IPR004942 Roadblock/LAMTOR2 domain CDG62_05770 2e32171fdf2008292318554c53547368 135 Gene3D G3DSA:3.30.450.30 19 135 5.6E-18 T 23-10-2018 CDG62_10390 5d8c6bac61fd8e00c4a43b0733e3e027 284 Pfam PF01575 MaoC like domain 180 230 2.1E-11 T 23-10-2018 IPR002539 MaoC-like dehydratase domain CDG62_10390 5d8c6bac61fd8e00c4a43b0733e3e027 284 SUPERFAMILY SSF54637 34 155 2.59E-7 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_10390 5d8c6bac61fd8e00c4a43b0733e3e027 284 Gene3D G3DSA:3.10.129.10 33 284 1.4E-64 T 23-10-2018 CDG62_10390 5d8c6bac61fd8e00c4a43b0733e3e027 284 SUPERFAMILY SSF54637 170 281 5.28E-18 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_13660 f6f198d3ffbfeb898a5ec4efcf307035 225 SUPERFAMILY SSF52499 13 210 1.03E-46 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_13660 f6f198d3ffbfeb898a5ec4efcf307035 225 Gene3D G3DSA:3.40.50.850 11 215 1.8E-50 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_13660 f6f198d3ffbfeb898a5ec4efcf307035 225 Pfam PF00857 Isochorismatase family 20 172 4.3E-21 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 CDG62_07880 ac79b51e92c2bf8d1f57c95849fc3bf6 749 SUPERFAMILY SSF55205 310 742 8.18E-131 T 23-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CDG62_07880 ac79b51e92c2bf8d1f57c95849fc3bf6 749 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 314 736 3.4E-118 T 23-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CDG62_07880 ac79b51e92c2bf8d1f57c95849fc3bf6 749 ProSitePatterns PS00104 EPSP synthase signature 1. 394 408 - T 23-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CDG62_07880 ac79b51e92c2bf8d1f57c95849fc3bf6 749 SUPERFAMILY SSF48179 181 288 4.65E-33 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_07880 ac79b51e92c2bf8d1f57c95849fc3bf6 749 Gene3D G3DSA:3.65.10.10 327 537 6.9E-168 T 23-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CDG62_07880 ac79b51e92c2bf8d1f57c95849fc3bf6 749 ProSitePatterns PS00885 EPSP synthase signature 2. 648 666 - T 23-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CDG62_07880 ac79b51e92c2bf8d1f57c95849fc3bf6 749 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 319 740 9.7E-131 T 23-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CDG62_07880 ac79b51e92c2bf8d1f57c95849fc3bf6 749 Pfam PF02153 Prephenate dehydrogenase 22 278 9.1E-70 T 23-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CDG62_07880 ac79b51e92c2bf8d1f57c95849fc3bf6 749 Gene3D G3DSA:3.40.50.720 6 183 4.5E-51 T 23-10-2018 CDG62_07880 ac79b51e92c2bf8d1f57c95849fc3bf6 749 Gene3D G3DSA:3.65.10.10 319 735 6.9E-168 T 23-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CDG62_07880 ac79b51e92c2bf8d1f57c95849fc3bf6 749 SUPERFAMILY SSF51735 8 176 2.05E-44 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_07880 ac79b51e92c2bf8d1f57c95849fc3bf6 749 Gene3D G3DSA:1.10.3660.10 184 288 4.9E-35 T 23-10-2018 CDG62_07880 ac79b51e92c2bf8d1f57c95849fc3bf6 749 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 315 744 33.009 T 23-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CDG62_13845 2d4bf945999acafd88b601667f07ac81 303 Pfam PF03466 LysR substrate binding domain 86 273 2.6E-28 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_13845 2d4bf945999acafd88b601667f07ac81 303 Gene3D G3DSA:3.40.190.10 83 165 1.5E-14 T 23-10-2018 CDG62_13845 2d4bf945999acafd88b601667f07ac81 303 SUPERFAMILY SSF46785 2 110 4.19E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_13845 2d4bf945999acafd88b601667f07ac81 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.7E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_13845 2d4bf945999acafd88b601667f07ac81 303 Gene3D G3DSA:1.10.10.10 1 82 1.1E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_13845 2d4bf945999acafd88b601667f07ac81 303 SUPERFAMILY SSF53850 87 276 8.01E-30 T 23-10-2018 CDG62_13845 2d4bf945999acafd88b601667f07ac81 303 Gene3D G3DSA:3.40.190.10 166 257 3.8E-5 T 23-10-2018 CDG62_13845 2d4bf945999acafd88b601667f07ac81 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.1E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_13845 2d4bf945999acafd88b601667f07ac81 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.1E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_13845 2d4bf945999acafd88b601667f07ac81 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.1E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_08380 be4acad1f307d5f5edc38767ca958106 370 Gene3D G3DSA:3.40.47.10 2 212 3.2E-53 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_08380 be4acad1f307d5f5edc38767ca958106 370 SUPERFAMILY SSF53901 2 367 1.53E-48 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_08380 be4acad1f307d5f5edc38767ca958106 370 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 276 366 2.4E-22 T 23-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CDG62_08380 be4acad1f307d5f5edc38767ca958106 370 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 146 162 - T 23-10-2018 IPR018201 Beta-ketoacyl synthase, active site CDG62_08380 be4acad1f307d5f5edc38767ca958106 370 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 149 226 4.7E-16 T 23-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CDG62_08380 be4acad1f307d5f5edc38767ca958106 370 Gene3D G3DSA:3.40.47.10 213 368 9.7E-37 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_04590 6211582a6083d2cd09d659c1cf7f2b96 95 Pfam PF13466 STAS domain 9 83 8.0E-10 T 23-10-2018 IPR002645 STAS domain CDG62_04590 6211582a6083d2cd09d659c1cf7f2b96 95 Gene3D G3DSA:3.30.750.24 8 95 2.4E-7 T 23-10-2018 IPR036513 STAS domain superfamily CDG62_04590 6211582a6083d2cd09d659c1cf7f2b96 95 SUPERFAMILY SSF52091 9 93 2.16E-8 T 23-10-2018 IPR036513 STAS domain superfamily CDG62_06385 3f0b35918fada1df75196053cab883be 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 77 7.0E-14 T 23-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CDG62_06385 3f0b35918fada1df75196053cab883be 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 20.52 T 23-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CDG62_06385 3f0b35918fada1df75196053cab883be 78 Gene3D G3DSA:1.10.1200.10 1 77 8.5E-26 T 23-10-2018 IPR036736 ACP-like superfamily CDG62_06385 3f0b35918fada1df75196053cab883be 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 6.4E-16 T 23-10-2018 IPR009081 Phosphopantetheine binding ACP domain CDG62_06385 3f0b35918fada1df75196053cab883be 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 23-10-2018 IPR006162 Phosphopantetheine attachment site CDG62_06385 3f0b35918fada1df75196053cab883be 78 SUPERFAMILY SSF47336 2 77 1.7E-22 T 23-10-2018 IPR036736 ACP-like superfamily CDG62_06385 3f0b35918fada1df75196053cab883be 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 1.2E-29 T 23-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CDG62_05920 3c6dd6ef07863bf1e19d1fcd115e54ea 372 Gene3D G3DSA:3.30.1540.10 226 314 1.1E-102 T 23-10-2018 CDG62_05920 3c6dd6ef07863bf1e19d1fcd115e54ea 372 Pfam PF02515 CoA-transferase family III 5 361 2.8E-93 T 23-10-2018 IPR003673 CoA-transferase family III GO:0003824 CDG62_05920 3c6dd6ef07863bf1e19d1fcd115e54ea 372 Gene3D G3DSA:3.40.50.10540 5 330 1.1E-102 T 23-10-2018 IPR023606 CoA-transferase family III domain superfamily CDG62_05920 3c6dd6ef07863bf1e19d1fcd115e54ea 372 SUPERFAMILY SSF89796 4 370 1.24E-103 T 23-10-2018 IPR023606 CoA-transferase family III domain superfamily CDG62_15205 74794acdef56da5bcc6ef6279c925141 489 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 6 488 1.2E-253 T 23-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CDG62_15205 74794acdef56da5bcc6ef6279c925141 489 SUPERFAMILY SSF53720 3 458 4.06E-124 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG62_15205 74794acdef56da5bcc6ef6279c925141 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDG62_15205 74794acdef56da5bcc6ef6279c925141 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDG62_15205 74794acdef56da5bcc6ef6279c925141 489 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 4 489 58.199 T 23-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CDG62_15205 74794acdef56da5bcc6ef6279c925141 489 Gene3D G3DSA:3.40.605.10 10 452 5.0E-143 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG62_15205 74794acdef56da5bcc6ef6279c925141 489 Pfam PF00171 Aldehyde dehydrogenase family 12 462 4.1E-122 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG62_15205 74794acdef56da5bcc6ef6279c925141 489 Gene3D G3DSA:3.40.309.10 250 440 5.0E-143 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG62_07700 f660a3ebe7d0bd3dccaea09a08ebe110 134 Gene3D G3DSA:3.10.50.30 44 134 1.6E-26 T 23-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CDG62_07700 f660a3ebe7d0bd3dccaea09a08ebe110 134 SUPERFAMILY SSF54534 48 126 1.7E-15 T 23-10-2018 CDG62_07700 f660a3ebe7d0bd3dccaea09a08ebe110 134 Gene3D G3DSA:1.10.286.20 1 43 9.6E-9 T 23-10-2018 CDG62_07700 f660a3ebe7d0bd3dccaea09a08ebe110 134 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 49 125 1.4E-16 T 23-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CDG62_07700 f660a3ebe7d0bd3dccaea09a08ebe110 134 Pfam PF14760 Rnk N-terminus 4 43 6.0E-12 T 23-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CDG62_07700 f660a3ebe7d0bd3dccaea09a08ebe110 134 PIRSF PIRSF006092 7 127 2.0E-22 T 23-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CDG62_04245 6e15eb0179bf74fa0aabf14a15cdb2f5 159 Pfam PF00114 Pilin (bacterial filament) 35 156 2.3E-18 T 23-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 CDG62_04245 6e15eb0179bf74fa0aabf14a15cdb2f5 159 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.2E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_04245 6e15eb0179bf74fa0aabf14a15cdb2f5 159 SUPERFAMILY SSF54523 7 156 6.28E-22 T 23-10-2018 CDG62_04245 6e15eb0179bf74fa0aabf14a15cdb2f5 159 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_04245 6e15eb0179bf74fa0aabf14a15cdb2f5 159 Gene3D G3DSA:3.30.700.10 7 155 3.6E-28 T 23-10-2018 CDG62_04245 6e15eb0179bf74fa0aabf14a15cdb2f5 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 9.2E-11 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_17545 bdb1d1e52b9fafa10d41fa07122d925f 1250 Gene3D G3DSA:3.40.50.300 19 473 1.6E-74 T 23-10-2018 CDG62_17545 bdb1d1e52b9fafa10d41fa07122d925f 1250 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1226 15.49 T 23-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CDG62_17545 bdb1d1e52b9fafa10d41fa07122d925f 1250 Pfam PF00580 UvrD/REP helicase N-terminal domain 21 472 1.0E-47 T 23-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CDG62_17545 bdb1d1e52b9fafa10d41fa07122d925f 1250 Gene3D G3DSA:3.40.50.300 488 868 3.6E-66 T 23-10-2018 CDG62_17545 bdb1d1e52b9fafa10d41fa07122d925f 1250 SUPERFAMILY SSF52980 927 1225 2.79E-55 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG62_17545 bdb1d1e52b9fafa10d41fa07122d925f 1250 Gene3D G3DSA:3.90.320.10 923 1232 1.0E-68 T 23-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal CDG62_17545 bdb1d1e52b9fafa10d41fa07122d925f 1250 Gene3D G3DSA:1.10.3170.10 167 384 1.6E-74 T 23-10-2018 CDG62_17545 bdb1d1e52b9fafa10d41fa07122d925f 1250 Pfam PF13361 UvrD-like helicase C-terminal domain 483 860 4.4E-26 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDG62_17545 bdb1d1e52b9fafa10d41fa07122d925f 1250 Pfam PF12705 PD-(D/E)XK nuclease superfamily 989 1175 8.2E-6 T 23-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CDG62_17545 bdb1d1e52b9fafa10d41fa07122d925f 1250 Gene3D G3DSA:1.10.486.10 614 759 3.6E-66 T 23-10-2018 CDG62_17545 bdb1d1e52b9fafa10d41fa07122d925f 1250 SUPERFAMILY SSF52540 21 865 5.06E-87 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_13125 1b8d0411b3e00aa0c5d3720f76edd611 234 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 3 227 1.3E-60 T 23-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 CDG62_13125 1b8d0411b3e00aa0c5d3720f76edd611 234 Gene3D G3DSA:3.40.50.300 1 158 1.0E-24 T 23-10-2018 CDG62_13125 1b8d0411b3e00aa0c5d3720f76edd611 234 SUPERFAMILY SSF52540 25 203 2.29E-18 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_13125 1b8d0411b3e00aa0c5d3720f76edd611 234 Pfam PF00308 Bacterial dnaA protein 36 191 2.2E-11 T 23-10-2018 IPR013317 Chromosomal replication initiator protein DnaA CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 SUPERFAMILY SSF69705 1 131 4.19E-33 T 23-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 Gene3D G3DSA:2.40.50.140 140 203 3.2E-13 T 23-10-2018 CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 Gene3D G3DSA:3.30.1480.10 1 133 5.8E-35 T 23-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 SUPERFAMILY SSF54814 206 283 1.24E-28 T 23-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 SUPERFAMILY SSF54814 284 346 7.19E-11 T 23-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 SMART SM00316 138 203 2.6E-6 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 SUPERFAMILY SSF47794 360 420 3.77E-9 T 23-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 Pfam PF13184 NusA-like KH domain 235 302 9.3E-28 T 23-10-2018 IPR025249 KH domain, NusA-like GO:0003723 CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 Pfam PF08529 NusA N-terminal domain 4 128 8.6E-35 T 23-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 Gene3D G3DSA:3.30.300.20 283 351 1.3E-20 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 Gene3D G3DSA:1.10.150.20 434 492 1.3E-20 T 23-10-2018 CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 1.4E-106 T 23-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 Gene3D G3DSA:3.30.300.20 204 282 3.0E-31 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 SUPERFAMILY SSF50249 137 204 2.21E-14 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 SUPERFAMILY SSF47794 432 493 2.83E-14 T 23-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 415 27.568 T 23-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 443 492 1.1E-13 T 23-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 Pfam PF14520 Helix-hairpin-helix domain 436 490 6.4E-8 T 23-10-2018 CDG62_17655 35faf0d58aceee8118d52e428c65193e 494 Gene3D G3DSA:1.10.150.20 358 426 1.7E-15 T 23-10-2018 CDG62_11680 b93de47b5827be1fcc88f7fc9d4e8109 233 Pfam PF04172 LrgB-like family 14 225 2.7E-64 T 23-10-2018 IPR007300 CidB/LrgB family CDG62_05870 71074691e7d2a25f2734e1a998e960dc 336 Gene3D G3DSA:3.60.21.10 115 310 4.1E-19 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like CDG62_05870 71074691e7d2a25f2734e1a998e960dc 336 SUPERFAMILY SSF56300 116 335 7.16E-31 T 23-10-2018 CDG62_05870 71074691e7d2a25f2734e1a998e960dc 336 Pfam PF00149 Calcineurin-like phosphoesterase 116 290 1.7E-12 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDG62_04250 938f82bec17d65bc2d75df8fde7dd770 527 Pfam PF15864 Protein glycosylation ligase 161 182 2.3E-7 T 23-10-2018 IPR031726 Protein glycosylation ligase domain CDG62_04250 938f82bec17d65bc2d75df8fde7dd770 527 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 354 428 9.5E-8 T 23-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal CDG62_04250 938f82bec17d65bc2d75df8fde7dd770 527 Pfam PF04932 O-Antigen ligase 198 332 2.2E-9 T 23-10-2018 IPR007016 O-antigen ligase-related CDG62_15670 055527ee8126e8068c0952f46bf38e82 315 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 312 1.0E-34 T 23-10-2018 IPR000160 GGDEF domain CDG62_15670 055527ee8126e8068c0952f46bf38e82 315 SUPERFAMILY SSF55781 8 146 2.09E-16 T 23-10-2018 CDG62_15670 055527ee8126e8068c0952f46bf38e82 315 Gene3D G3DSA:3.30.70.270 159 315 2.4E-39 T 23-10-2018 CDG62_15670 055527ee8126e8068c0952f46bf38e82 315 SMART SM00267 154 315 1.3E-34 T 23-10-2018 IPR000160 GGDEF domain CDG62_15670 055527ee8126e8068c0952f46bf38e82 315 Pfam PF00990 Diguanylate cyclase, GGDEF domain 167 308 8.5E-31 T 23-10-2018 IPR000160 GGDEF domain CDG62_15670 055527ee8126e8068c0952f46bf38e82 315 SMART SM00065 8 154 1.9E-8 T 23-10-2018 IPR003018 GAF domain GO:0005515 CDG62_15670 055527ee8126e8068c0952f46bf38e82 315 Pfam PF01590 GAF domain 10 142 6.8E-6 T 23-10-2018 IPR003018 GAF domain GO:0005515 CDG62_15670 055527ee8126e8068c0952f46bf38e82 315 SUPERFAMILY SSF55073 170 310 4.63E-36 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_15670 055527ee8126e8068c0952f46bf38e82 315 Gene3D G3DSA:3.30.450.40 5 153 5.4E-9 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG62_04335 506ef8cd1db12508c5bc6126bca9afdb 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 12 179 4.3E-44 T 23-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CDG62_04335 506ef8cd1db12508c5bc6126bca9afdb 182 Gene3D G3DSA:2.30.30.240 99 182 1.6E-32 T 23-10-2018 CDG62_04335 506ef8cd1db12508c5bc6126bca9afdb 182 Gene3D G3DSA:2.40.30.60 1 98 5.6E-36 T 23-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 CDG62_04335 506ef8cd1db12508c5bc6126bca9afdb 182 SUPERFAMILY SSF50447 10 98 3.32E-21 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG62_04335 506ef8cd1db12508c5bc6126bca9afdb 182 Pfam PF01782 RimM N-terminal domain 13 94 1.9E-22 T 23-10-2018 IPR002676 RimM, N-terminal GO:0006364 CDG62_04335 506ef8cd1db12508c5bc6126bca9afdb 182 SUPERFAMILY SSF50346 104 179 8.24E-18 T 23-10-2018 IPR011033 PRC-barrel-like superfamily CDG62_04335 506ef8cd1db12508c5bc6126bca9afdb 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 11 182 22.064 T 23-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CDG62_04335 506ef8cd1db12508c5bc6126bca9afdb 182 Pfam PF05239 PRC-barrel domain 101 177 5.1E-8 T 23-10-2018 IPR027275 PRC-barrel domain CDG62_12340 184cab70e717bbd45cc51a9761f1bed0 244 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 197 2.1E-36 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CDG62_08875 798e78de7e1dd2696b08de8a456225cf 144 SUPERFAMILY SSF54654 95 140 4.19E-5 T 23-10-2018 IPR036354 Proteinase inhibitor I13, potato inhibitor I superfamily CDG62_08875 798e78de7e1dd2696b08de8a456225cf 144 Pfam PF03891 Domain of unknown function (DUF333) 31 76 9.4E-24 T 23-10-2018 IPR005590 Protein of unknown function DUF333 CDG62_08875 798e78de7e1dd2696b08de8a456225cf 144 Gene3D G3DSA:3.30.10.10 77 143 3.2E-19 T 23-10-2018 CDG62_08875 798e78de7e1dd2696b08de8a456225cf 144 Pfam PF11720 Peptidase inhibitor I78 family 81 144 4.9E-11 T 23-10-2018 IPR021719 Proteinase inhibitor I78 CDG62_00995 8e9ad147a8bd18b280f80b464ccf46a8 1741 Gene3D G3DSA:1.10.510.10 609 661 2.4E-8 T 23-10-2018 CDG62_00995 8e9ad147a8bd18b280f80b464ccf46a8 1741 Gene3D G3DSA:3.40.50.300 1480 1713 1.9E-41 T 23-10-2018 CDG62_00995 8e9ad147a8bd18b280f80b464ccf46a8 1741 Pfam PF13086 AAA domain 1111 1435 5.2E-36 T 23-10-2018 CDG62_00995 8e9ad147a8bd18b280f80b464ccf46a8 1741 Pfam PF13087 AAA domain 1458 1681 6.1E-36 T 23-10-2018 CDG62_00995 8e9ad147a8bd18b280f80b464ccf46a8 1741 SUPERFAMILY SSF52540 1107 1692 7.58E-42 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00995 8e9ad147a8bd18b280f80b464ccf46a8 1741 Pfam PF08378 Nuclease-related domain 27 141 2.4E-8 T 23-10-2018 IPR011528 Nuclease-related domain, NERD CDG62_00995 8e9ad147a8bd18b280f80b464ccf46a8 1741 Gene3D G3DSA:3.30.200.20 565 608 2.4E-8 T 23-10-2018 CDG62_00995 8e9ad147a8bd18b280f80b464ccf46a8 1741 SUPERFAMILY SSF56112 330 516 5.79E-6 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_00995 8e9ad147a8bd18b280f80b464ccf46a8 1741 Pfam PF00069 Protein kinase domain 564 661 5.4E-7 T 23-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDG62_00995 8e9ad147a8bd18b280f80b464ccf46a8 1741 SUPERFAMILY SSF56112 554 659 1.07E-11 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_18830 81e5592e3163966901a812366b7ee2c0 173 SUPERFAMILY SSF101307 18 168 3.79E-41 T 23-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 CDG62_18830 81e5592e3163966901a812366b7ee2c0 173 Pfam PF04608 Phosphatidylglycerophosphatase A 25 166 1.2E-46 T 23-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CDG62_18830 81e5592e3163966901a812366b7ee2c0 173 PIRSF PIRSF006162 14 173 2.4E-48 T 23-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CDG62_16750 8b497b300aafda481e754bab2b0df322 731 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 275 351 1.1E-8 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG62_16750 8b497b300aafda481e754bab2b0df322 731 Pfam PF03572 Peptidase family S41 396 569 9.9E-41 T 23-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CDG62_16750 8b497b300aafda481e754bab2b0df322 731 Gene3D G3DSA:3.90.226.10 360 590 2.4E-53 T 23-10-2018 CDG62_16750 8b497b300aafda481e754bab2b0df322 731 SUPERFAMILY SSF52096 226 575 3.48E-52 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_16750 8b497b300aafda481e754bab2b0df322 731 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 237 590 1.2E-75 T 23-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CDG62_16750 8b497b300aafda481e754bab2b0df322 731 SMART SM00245 361 571 1.1E-32 T 23-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CDG62_16750 8b497b300aafda481e754bab2b0df322 731 Gene3D G3DSA:2.30.42.10 269 354 3.1E-11 T 23-10-2018 CDG62_16750 8b497b300aafda481e754bab2b0df322 731 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 575 723 1.4E-29 T 23-10-2018 IPR020992 Tail specific protease, C-terminal CDG62_16750 8b497b300aafda481e754bab2b0df322 731 SMART SM00228 277 357 2.0E-6 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG62_16750 8b497b300aafda481e754bab2b0df322 731 SUPERFAMILY SSF50156 273 359 1.53E-11 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG62_14135 4b703ef5edb46a8f5abaf4e271a824e9 694 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 20 691 1.0E-286 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDG62_14135 4b703ef5edb46a8f5abaf4e271a824e9 694 SUPERFAMILY SSF143724 124 325 1.77E-64 T 23-10-2018 CDG62_14135 4b703ef5edb46a8f5abaf4e271a824e9 694 SUPERFAMILY SSF56024 328 505 2.86E-56 T 23-10-2018 CDG62_14135 4b703ef5edb46a8f5abaf4e271a824e9 694 Pfam PF13089 Polyphosphate kinase N-terminal domain 21 126 2.1E-34 T 23-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CDG62_14135 4b703ef5edb46a8f5abaf4e271a824e9 694 Gene3D G3DSA:3.30.870.10 329 511 2.6E-71 T 23-10-2018 CDG62_14135 4b703ef5edb46a8f5abaf4e271a824e9 694 SUPERFAMILY SSF56024 512 692 2.47E-70 T 23-10-2018 CDG62_14135 4b703ef5edb46a8f5abaf4e271a824e9 694 Pfam PF13090 Polyphosphate kinase C-terminal domain 342 690 4.1E-153 T 23-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CDG62_14135 4b703ef5edb46a8f5abaf4e271a824e9 694 PIRSF PIRSF015589 2 694 2.2E-277 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDG62_14135 4b703ef5edb46a8f5abaf4e271a824e9 694 Gene3D G3DSA:3.30.1840.10 15 325 2.1E-103 T 23-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 CDG62_14135 4b703ef5edb46a8f5abaf4e271a824e9 694 Pfam PF02503 Polyphosphate kinase middle domain 136 333 1.2E-60 T 23-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CDG62_14135 4b703ef5edb46a8f5abaf4e271a824e9 694 Hamap MF_00347 Polyphosphate kinase [ppk]. 18 691 27.829 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDG62_14135 4b703ef5edb46a8f5abaf4e271a824e9 694 SUPERFAMILY SSF140356 18 122 3.4E-36 T 23-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 CDG62_14135 4b703ef5edb46a8f5abaf4e271a824e9 694 Gene3D G3DSA:3.30.870.10 512 694 8.6E-67 T 23-10-2018 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 SMART SM01005 279 407 1.9E-43 T 23-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 Pfam PF00842 Alanine racemase, C-terminal domain 280 405 1.6E-30 T 23-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 SUPERFAMILY SSF50621 273 407 7.67E-39 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 Hamap MF_01201 Alanine racemase. 40 407 24.819 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 SUPERFAMILY SSF51419 47 269 2.36E-43 T 23-10-2018 IPR029066 PLP-binding barrel CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 Gene3D G3DSA:3.20.20.10 49 266 8.6E-136 T 23-10-2018 IPR029066 PLP-binding barrel CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 71 81 - T 23-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 TIGRFAM TIGR00492 alr: alanine racemase 43 379 1.7E-69 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 Gene3D G3DSA:2.40.37.10 43 403 8.6E-136 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 PRINTS PR00992 Alanine racemase signature 102 120 6.4E-36 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 PRINTS PR00992 Alanine racemase signature 243 270 6.4E-36 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 PRINTS PR00992 Alanine racemase signature 295 310 6.4E-36 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 PRINTS PR00992 Alanine racemase signature 200 211 6.4E-36 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 PRINTS PR00992 Alanine racemase signature 312 327 6.4E-36 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 PRINTS PR00992 Alanine racemase signature 333 350 6.4E-36 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 PRINTS PR00992 Alanine racemase signature 66 82 6.4E-36 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15185 fe8ce765d69d4f733395c41ba4423831 408 Pfam PF01168 Alanine racemase, N-terminal domain 47 269 3.6E-46 T 23-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_19215 c5dfad7bfe668bf9407b9ceb495dcc91 233 Pfam PF13098 Thioredoxin-like domain 107 226 1.9E-27 T 23-10-2018 IPR012336 Thioredoxin-like fold CDG62_19215 c5dfad7bfe668bf9407b9ceb495dcc91 233 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 78 6.7E-12 T 23-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CDG62_19215 c5dfad7bfe668bf9407b9ceb495dcc91 233 Gene3D G3DSA:3.10.450.70 18 82 2.3E-5 T 23-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CDG62_19215 c5dfad7bfe668bf9407b9ceb495dcc91 233 ProSitePatterns PS00194 Thioredoxin family active site. 115 133 - T 23-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDG62_19215 c5dfad7bfe668bf9407b9ceb495dcc91 233 Gene3D G3DSA:3.40.30.10 99 230 1.9E-34 T 23-10-2018 CDG62_19215 c5dfad7bfe668bf9407b9ceb495dcc91 233 SUPERFAMILY SSF54423 30 82 1.55E-9 T 23-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CDG62_19215 c5dfad7bfe668bf9407b9ceb495dcc91 233 SUPERFAMILY SSF52833 77 225 7.4E-29 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_12655 01a8ebb00143c9a5089a8a51c504e44d 304 Gene3D G3DSA:3.40.50.300 54 302 5.1E-62 T 23-10-2018 CDG62_12655 01a8ebb00143c9a5089a8a51c504e44d 304 ProSitePatterns PS00211 ABC transporters family signature. 201 215 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_12655 01a8ebb00143c9a5089a8a51c504e44d 304 SUPERFAMILY SSF52540 57 292 1.26E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12655 01a8ebb00143c9a5089a8a51c504e44d 304 SMART SM00382 81 276 1.1E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_12655 01a8ebb00143c9a5089a8a51c504e44d 304 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 57 304 2.2E-122 T 23-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CDG62_12655 01a8ebb00143c9a5089a8a51c504e44d 304 Pfam PF00005 ABC transporter 73 228 2.0E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_15485 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_13605 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_15535 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_13380 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_03865 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_09900 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_03980 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_06170 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_15700 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_06415 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_14600 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_15230 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_13705 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_05410 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_17825 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_18570 007ce5664ef365eab3fa379860fd1812 310 Pfam PF13737 Transposase DDE domain 22 130 8.3E-44 T 23-10-2018 IPR025668 Transposase DDE domain CDG62_03110 a4470812d4017526a7b683b99aefb892 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 191 207 5.9E-68 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG62_03110 a4470812d4017526a7b683b99aefb892 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 587 616 5.9E-68 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG62_03110 a4470812d4017526a7b683b99aefb892 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 250 265 5.9E-68 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG62_03110 a4470812d4017526a7b683b99aefb892 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 389 409 5.9E-68 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG62_03110 a4470812d4017526a7b683b99aefb892 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 545 565 5.9E-68 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG62_03110 a4470812d4017526a7b683b99aefb892 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 138 151 5.9E-68 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG62_03110 a4470812d4017526a7b683b99aefb892 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 719 745 5.9E-68 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG62_03110 a4470812d4017526a7b683b99aefb892 894 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 2 894 18.44 T 23-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG62_03110 a4470812d4017526a7b683b99aefb892 894 SUPERFAMILY SSF51621 6 894 4.08E-302 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDG62_03110 a4470812d4017526a7b683b99aefb892 894 Pfam PF00311 Phosphoenolpyruvate carboxylase 134 894 2.1E-276 T 23-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG62_03110 a4470812d4017526a7b683b99aefb892 894 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 547 559 - T 23-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG62_03110 a4470812d4017526a7b683b99aefb892 894 Gene3D G3DSA:1.20.1440.90 307 392 6.7E-21 T 23-10-2018 CDG62_03110 a4470812d4017526a7b683b99aefb892 894 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 139 150 - T 23-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CDG62_13985 d08d3515587650468d831d0dfd36d747 544 PRINTS PR00298 60kDa chaperonin signature 268 291 7.4E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_13985 d08d3515587650468d831d0dfd36d747 544 PRINTS PR00298 60kDa chaperonin signature 83 110 7.4E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_13985 d08d3515587650468d831d0dfd36d747 544 PRINTS PR00298 60kDa chaperonin signature 350 375 7.4E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_13985 d08d3515587650468d831d0dfd36d747 544 PRINTS PR00298 60kDa chaperonin signature 27 53 7.4E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_13985 d08d3515587650468d831d0dfd36d747 544 PRINTS PR00298 60kDa chaperonin signature 398 419 7.4E-74 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_13985 d08d3515587650468d831d0dfd36d747 544 SUPERFAMILY SSF52029 184 376 1.94E-83 T 23-10-2018 IPR027409 GroEL-like apical domain superfamily CDG62_13985 d08d3515587650468d831d0dfd36d747 544 SUPERFAMILY SSF48592 7 521 9.99E-78 T 23-10-2018 IPR027413 GroEL-like equatorial domain superfamily CDG62_13985 d08d3515587650468d831d0dfd36d747 544 Gene3D G3DSA:1.10.560.10 8 521 4.8E-239 T 23-10-2018 IPR027413 GroEL-like equatorial domain superfamily CDG62_13985 d08d3515587650468d831d0dfd36d747 544 Gene3D G3DSA:3.30.260.10 138 410 4.8E-239 T 23-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDG62_13985 d08d3515587650468d831d0dfd36d747 544 SUPERFAMILY SSF54849 137 204 4.35E-22 T 23-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDG62_13985 d08d3515587650468d831d0dfd36d747 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 3.2E-95 T 23-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CDG62_13985 d08d3515587650468d831d0dfd36d747 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_13985 d08d3515587650468d831d0dfd36d747 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.7E-253 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_13985 d08d3515587650468d831d0dfd36d747 544 Gene3D G3DSA:3.50.7.10 173 379 4.8E-239 T 23-10-2018 IPR027409 GroEL-like apical domain superfamily CDG62_13985 d08d3515587650468d831d0dfd36d747 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.141 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_07335 f4c06cdafca35e081af781116943d18d 446 Pfam PF03583 Secretory lipase 119 226 1.2E-6 T 23-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 CDG62_07335 f4c06cdafca35e081af781116943d18d 446 Gene3D G3DSA:3.40.50.1820 334 440 4.3E-6 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_07335 f4c06cdafca35e081af781116943d18d 446 PIRSF PIRSF029171 2 425 7.5E-67 T 23-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 CDG62_07335 f4c06cdafca35e081af781116943d18d 446 Gene3D G3DSA:3.40.50.1820 18 252 9.7E-47 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_07335 f4c06cdafca35e081af781116943d18d 446 SUPERFAMILY SSF53474 64 403 7.56E-23 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_09160 6fa08c12c0ea1f1f857ce7d2e2bbf99b 296 Gene3D G3DSA:1.10.10.10 4 91 5.3E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_09160 6fa08c12c0ea1f1f857ce7d2e2bbf99b 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.7E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_09160 6fa08c12c0ea1f1f857ce7d2e2bbf99b 296 Gene3D G3DSA:3.40.190.10 164 263 1.4E-66 T 23-10-2018 CDG62_09160 6fa08c12c0ea1f1f857ce7d2e2bbf99b 296 Pfam PF03466 LysR substrate binding domain 89 292 3.3E-43 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_09160 6fa08c12c0ea1f1f857ce7d2e2bbf99b 296 SUPERFAMILY SSF46785 5 113 4.87E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_09160 6fa08c12c0ea1f1f857ce7d2e2bbf99b 296 Gene3D G3DSA:3.40.190.10 92 290 1.4E-66 T 23-10-2018 CDG62_09160 6fa08c12c0ea1f1f857ce7d2e2bbf99b 296 SUPERFAMILY SSF53850 90 294 3.57E-43 T 23-10-2018 CDG62_04860 80268ae223206ca70b217a46ddacb270 190 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 28 178 2.3E-44 T 23-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria CDG62_04860 80268ae223206ca70b217a46ddacb270 190 Gene3D G3DSA:1.20.1540.10 3 182 4.4E-15 T 23-10-2018 IPR035952 Rhomboid-like superfamily CDG62_04860 80268ae223206ca70b217a46ddacb270 190 SUPERFAMILY SSF144091 5 183 6.15E-21 T 23-10-2018 CDG62_04860 80268ae223206ca70b217a46ddacb270 190 Pfam PF01694 Rhomboid family 40 181 5.2E-12 T 23-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 SUPERFAMILY SSF50621 253 412 2.03E-50 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 Gene3D G3DSA:3.20.20.10 33 274 6.7E-147 T 23-10-2018 IPR029066 PLP-binding barrel CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 56 74 - T 23-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 297 315 2.5E-30 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 2.5E-30 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 74 91 2.5E-30 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 163 172 2.5E-30 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 34 279 1.4E-72 T 23-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 411 40.453 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 Gene3D G3DSA:2.40.37.10 16 406 6.7E-147 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 410 4.9E-160 T 23-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 240 - T 23-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 SUPERFAMILY SSF51419 25 281 3.4E-79 T 23-10-2018 IPR029066 PLP-binding barrel CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 189 202 2.1E-24 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 76 88 2.1E-24 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 56 74 2.1E-24 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 2.1E-24 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 2.1E-24 T 23-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CDG62_07415 af9bb93b8af76dc875ccea19b635b960 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 368 1.8E-21 T 23-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CDG62_06375 77608604dfe8a9ccddaf0a85fb299399 328 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 18 312 2.9E-39 T 23-10-2018 IPR020801 Polyketide synthase, acyl transferase domain CDG62_06375 77608604dfe8a9ccddaf0a85fb299399 328 SUPERFAMILY SSF52151 15 318 2.88E-69 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG62_06375 77608604dfe8a9ccddaf0a85fb299399 328 PIRSF PIRSF000446 12 321 3.0E-104 T 23-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CDG62_06375 77608604dfe8a9ccddaf0a85fb299399 328 Pfam PF00698 Acyl transferase domain 17 275 7.6E-35 T 23-10-2018 IPR014043 Acyl transferase CDG62_06375 77608604dfe8a9ccddaf0a85fb299399 328 SUPERFAMILY SSF55048 139 202 1.83E-14 T 23-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CDG62_06375 77608604dfe8a9ccddaf0a85fb299399 328 Gene3D G3DSA:3.30.70.250 134 207 2.2E-91 T 23-10-2018 CDG62_06375 77608604dfe8a9ccddaf0a85fb299399 328 Gene3D G3DSA:3.40.366.10 17 296 2.2E-91 T 23-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 CDG62_06375 77608604dfe8a9ccddaf0a85fb299399 328 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 14 298 1.8E-98 T 23-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CDG62_00555 79177b9c2f75a9b56e795949b9e86f3b 550 Pfam PF03389 MobA/MobL family 17 224 5.0E-61 T 23-10-2018 IPR005053 MobA/MobL protein CDG62_00555 79177b9c2f75a9b56e795949b9e86f3b 550 Gene3D G3DSA:3.30.930.30 2 202 2.3E-71 T 23-10-2018 CDG62_09905 fb5a9f14619cad7ec3ae7c9e593e77a1 230 SUPERFAMILY SSF53681 1 114 1.03E-25 T 23-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG62_09905 fb5a9f14619cad7ec3ae7c9e593e77a1 230 SUPERFAMILY SSF53681 119 228 1.31E-24 T 23-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG62_09905 fb5a9f14619cad7ec3ae7c9e593e77a1 230 Gene3D G3DSA:3.40.50.1860 2 222 2.1E-64 T 23-10-2018 CDG62_09905 fb5a9f14619cad7ec3ae7c9e593e77a1 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 9.0E-53 T 23-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG62_09905 fb5a9f14619cad7ec3ae7c9e593e77a1 230 Gene3D G3DSA:3.40.50.1860 104 215 2.1E-64 T 23-10-2018 CDG62_09905 fb5a9f14619cad7ec3ae7c9e593e77a1 230 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 193 203 - T 23-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG62_09905 fb5a9f14619cad7ec3ae7c9e593e77a1 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 2 227 1.5E-42 T 23-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 CDG62_17790 bfc1f30a3d78f736976088ac79b0c4b2 599 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 11 578 1.1E-177 T 23-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 CDG62_17790 bfc1f30a3d78f736976088ac79b0c4b2 599 SUPERFAMILY SSF46600 194 246 1.31E-12 T 23-10-2018 IPR036876 UVR domain superfamily CDG62_17790 bfc1f30a3d78f736976088ac79b0c4b2 599 Pfam PF02151 UvrB/uvrC motif 208 240 1.0E-7 T 23-10-2018 IPR001943 UVR domain GO:0005515 CDG62_17790 bfc1f30a3d78f736976088ac79b0c4b2 599 SMART SM00465 19 100 2.3E-23 T 23-10-2018 IPR000305 GIY-YIG endonuclease CDG62_17790 bfc1f30a3d78f736976088ac79b0c4b2 599 Hamap MF_00203 UvrABC system protein C [uvrC]. 6 596 26.702 T 23-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 CDG62_17790 bfc1f30a3d78f736976088ac79b0c4b2 599 Gene3D G3DSA:3.40.1440.10 5 104 1.0E-31 T 23-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CDG62_17790 bfc1f30a3d78f736976088ac79b0c4b2 599 SUPERFAMILY SSF82771 19 102 3.53E-23 T 23-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 CDG62_17790 bfc1f30a3d78f736976088ac79b0c4b2 599 Gene3D G3DSA:3.30.420.340 377 541 5.9E-53 T 23-10-2018 IPR038476 UvrC homology region 2 superfamily CDG62_17790 bfc1f30a3d78f736976088ac79b0c4b2 599 Pfam PF01541 GIY-YIG catalytic domain 21 95 3.3E-9 T 23-10-2018 IPR000305 GIY-YIG endonuclease CDG62_17790 bfc1f30a3d78f736976088ac79b0c4b2 599 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 389 531 2.7E-49 T 23-10-2018 IPR001162 UvrC family homology region CDG62_17790 bfc1f30a3d78f736976088ac79b0c4b2 599 SUPERFAMILY SSF47781 510 598 1.14E-22 T 23-10-2018 IPR010994 RuvA domain 2-like CDG62_17790 bfc1f30a3d78f736976088ac79b0c4b2 599 Gene3D G3DSA:1.10.150.20 544 599 8.8E-18 T 23-10-2018 CDG62_18120 ecbabb1b5654ba4d828697b27cacf733 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 344 368 - T 23-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_18120 ecbabb1b5654ba4d828697b27cacf733 398 Pfam PF01098 Cell cycle protein 33 386 4.5E-99 T 23-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_18120 ecbabb1b5654ba4d828697b27cacf733 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 28 396 37.51 T 23-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_18120 ecbabb1b5654ba4d828697b27cacf733 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 384 4.0E-120 T 23-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_09855 1273d57b3c7505a2be776c1b47366ba2 355 Gene3D G3DSA:3.20.20.140 6 355 1.6E-72 T 23-10-2018 CDG62_09855 1273d57b3c7505a2be776c1b47366ba2 355 Pfam PF04909 Amidohydrolase 9 354 3.9E-21 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CDG62_09855 1273d57b3c7505a2be776c1b47366ba2 355 SUPERFAMILY SSF51556 8 355 1.25E-32 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG62_07955 b546ee4f3faacef112a45c17535d2beb 84 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 2.4E-29 T 23-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CDG62_07955 b546ee4f3faacef112a45c17535d2beb 84 Pfam PF02599 Global regulator protein family 1 52 1.0E-26 T 23-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CDG62_07955 b546ee4f3faacef112a45c17535d2beb 84 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-20 T 23-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CDG62_07955 b546ee4f3faacef112a45c17535d2beb 84 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 64 17.498 T 23-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 CDG62_07955 b546ee4f3faacef112a45c17535d2beb 84 SUPERFAMILY SSF117130 1 54 3.4E-20 T 23-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 CDG62_07955 b546ee4f3faacef112a45c17535d2beb 84 Gene3D G3DSA:3.30.70.1680 1 59 1.2E-28 T 23-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 CDG62_10465 70a81d6a22ab09c6c904d4528838071b 128 Gene3D G3DSA:3.30.56.110 8 128 7.4E-51 T 23-10-2018 CDG62_10465 70a81d6a22ab09c6c904d4528838071b 128 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 13 126 9.2E-51 T 23-10-2018 IPR018714 Protein of unknown function DUF2237 CDG62_07210 acfc04d11499cfdcd2483c2b2d0d1f02 325 Gene3D G3DSA:3.40.50.720 122 293 7.1E-82 T 23-10-2018 CDG62_07210 acfc04d11499cfdcd2483c2b2d0d1f02 325 SUPERFAMILY SSF50129 1 142 1.26E-27 T 23-10-2018 IPR011032 GroES-like superfamily CDG62_07210 acfc04d11499cfdcd2483c2b2d0d1f02 325 Gene3D G3DSA:3.90.180.10 4 308 7.1E-82 T 23-10-2018 CDG62_07210 acfc04d11499cfdcd2483c2b2d0d1f02 325 Pfam PF00107 Zinc-binding dehydrogenase 151 266 3.3E-15 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDG62_07210 acfc04d11499cfdcd2483c2b2d0d1f02 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 89 1.5E-8 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDG62_07210 acfc04d11499cfdcd2483c2b2d0d1f02 325 SUPERFAMILY SSF51735 113 288 3.07E-39 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_07210 acfc04d11499cfdcd2483c2b2d0d1f02 325 SMART SM00829 11 323 4.9E-5 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDG62_06825 27bd74e21c13af60d5ecbf7d74fc8a8b 631 Hamap MF_00974 DNA primase [dnaG]. 2 623 26.496 T 23-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CDG62_06825 27bd74e21c13af60d5ecbf7d74fc8a8b 631 Pfam PF01807 CHC2 zinc finger 4 98 5.7E-38 T 23-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CDG62_06825 27bd74e21c13af60d5ecbf7d74fc8a8b 631 Gene3D G3DSA:3.40.1360.10 295 418 1.3E-36 T 23-10-2018 CDG62_06825 27bd74e21c13af60d5ecbf7d74fc8a8b 631 SMART SM00400 34 88 1.3E-29 T 23-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CDG62_06825 27bd74e21c13af60d5ecbf7d74fc8a8b 631 Pfam PF10410 DnaB-helicase binding domain of primase 421 474 4.0E-6 T 23-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CDG62_06825 27bd74e21c13af60d5ecbf7d74fc8a8b 631 SUPERFAMILY SSF57783 1 97 5.61E-33 T 23-10-2018 CDG62_06825 27bd74e21c13af60d5ecbf7d74fc8a8b 631 SUPERFAMILY SSF56731 174 466 2.62E-92 T 23-10-2018 CDG62_06825 27bd74e21c13af60d5ecbf7d74fc8a8b 631 SMART SM00493 312 382 9.5E-15 T 23-10-2018 IPR006171 TOPRIM domain CDG62_06825 27bd74e21c13af60d5ecbf7d74fc8a8b 631 Gene3D G3DSA:3.90.980.10 173 294 3.9E-36 T 23-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CDG62_06825 27bd74e21c13af60d5ecbf7d74fc8a8b 631 Pfam PF13662 Toprim domain 316 379 4.2E-15 T 23-10-2018 IPR006171 TOPRIM domain CDG62_06825 27bd74e21c13af60d5ecbf7d74fc8a8b 631 Gene3D G3DSA:3.90.580.10 1 101 7.8E-37 T 23-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 CDG62_06825 27bd74e21c13af60d5ecbf7d74fc8a8b 631 Pfam PF08275 DNA primase catalytic core, N-terminal domain 184 304 2.4E-36 T 23-10-2018 IPR013264 DNA primase, catalytic core, N-terminal CDG62_04160 0cce513afa2487bb6bbc2b92593b3b71 372 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 372 9.4E-123 T 23-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_04160 0cce513afa2487bb6bbc2b92593b3b71 372 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 5.0E-4 T 23-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_04160 0cce513afa2487bb6bbc2b92593b3b71 372 Pfam PF00953 Glycosyl transferase family 4 99 296 1.3E-32 T 23-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 CDG62_04160 0cce513afa2487bb6bbc2b92593b3b71 372 ProSitePatterns PS01348 MraY family signature 2. 201 212 - T 23-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_04160 0cce513afa2487bb6bbc2b92593b3b71 372 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 370 23.198 T 23-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_04160 0cce513afa2487bb6bbc2b92593b3b71 372 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 23-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_00795 ea16e648fc879e0f45f5af3c71efbff0 679 Pfam PF13337 Putative ATP-dependent Lon protease 15 469 2.3E-204 T 23-10-2018 IPR014061 Conserved hypothetical protein CHP02688 CDG62_00795 ea16e648fc879e0f45f5af3c71efbff0 679 TIGRFAM TIGR02688 TIGR02688: TIGR02688 family protein 13 460 2.2E-186 T 23-10-2018 IPR014061 Conserved hypothetical protein CHP02688 CDG62_00795 ea16e648fc879e0f45f5af3c71efbff0 679 SUPERFAMILY SSF52540 219 419 2.66E-6 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00795 ea16e648fc879e0f45f5af3c71efbff0 679 Gene3D G3DSA:3.30.230.10 500 676 4.1E-22 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG62_00795 ea16e648fc879e0f45f5af3c71efbff0 679 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 631 649 6.8E-5 T 23-10-2018 CDG62_00795 ea16e648fc879e0f45f5af3c71efbff0 679 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 608 627 6.8E-5 T 23-10-2018 CDG62_00795 ea16e648fc879e0f45f5af3c71efbff0 679 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 228 247 6.8E-5 T 23-10-2018 CDG62_00795 ea16e648fc879e0f45f5af3c71efbff0 679 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 517 673 4.0E-12 T 23-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CDG62_00795 ea16e648fc879e0f45f5af3c71efbff0 679 SUPERFAMILY SSF54211 499 677 1.86E-23 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_00795 ea16e648fc879e0f45f5af3c71efbff0 679 TIGRFAM TIGR02653 Lon_rel_chp: conserved hypothetical protein 7 678 0.0 T 23-10-2018 IPR013473 Conserved hypothetical protein CHP02653, peptidase S16 non-peptidase homologue CDG62_10255 5bd99a15b4545a61e0c0bb121831c928 501 Gene3D G3DSA:3.50.50.60 4 173 8.2E-54 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_10255 5bd99a15b4545a61e0c0bb121831c928 501 Gene3D G3DSA:3.50.50.60 284 499 2.6E-38 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_10255 5bd99a15b4545a61e0c0bb121831c928 501 SUPERFAMILY SSF51905 267 465 4.94E-18 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_10255 5bd99a15b4545a61e0c0bb121831c928 501 Pfam PF00743 Flavin-binding monooxygenase-like 12 344 1.1E-24 T 23-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 CDG62_10255 5bd99a15b4545a61e0c0bb121831c928 501 SUPERFAMILY SSF51905 10 477 1.3E-53 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_06470 13427479f812bcda989ffdf505fa1a15 443 Gene3D G3DSA:3.40.50.11540 64 243 8.3E-78 T 23-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06470 13427479f812bcda989ffdf505fa1a15 443 SUPERFAMILY SSF142019 30 248 2.88E-83 T 23-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06470 13427479f812bcda989ffdf505fa1a15 443 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 345 428 1.1E-24 T 23-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06470 13427479f812bcda989ffdf505fa1a15 443 Gene3D G3DSA:3.10.20.600 246 340 8.9E-29 T 23-10-2018 CDG62_06470 13427479f812bcda989ffdf505fa1a15 443 Gene3D G3DSA:1.20.1440.230 341 441 1.3E-25 T 23-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06470 13427479f812bcda989ffdf505fa1a15 443 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 59 231 7.8E-50 T 23-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06470 13427479f812bcda989ffdf505fa1a15 443 SMART SM00928 343 388 2.1E-20 T 23-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06470 13427479f812bcda989ffdf505fa1a15 443 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 19 430 3.4E-178 T 23-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06470 13427479f812bcda989ffdf505fa1a15 443 SUPERFAMILY SSF140490 340 433 2.75E-30 T 23-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06470 13427479f812bcda989ffdf505fa1a15 443 Pfam PF10531 SLBB domain 260 305 5.1E-7 T 23-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06470 13427479f812bcda989ffdf505fa1a15 443 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 356 367 - T 23-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06470 13427479f812bcda989ffdf505fa1a15 443 SUPERFAMILY SSF142984 255 338 6.93E-21 T 23-10-2018 CDG62_06470 13427479f812bcda989ffdf505fa1a15 443 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 179 194 - T 23-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_18880 135da6bf4e9f07d2f21e1a88335b9b29 217 Gene3D G3DSA:3.40.50.20 3 92 2.1E-23 T 23-10-2018 CDG62_18880 135da6bf4e9f07d2f21e1a88335b9b29 217 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 8 212 2.4E-54 T 23-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like CDG62_18880 135da6bf4e9f07d2f21e1a88335b9b29 217 Gene3D G3DSA:2.160.10.10 94 207 9.2E-34 T 23-10-2018 CDG62_18880 135da6bf4e9f07d2f21e1a88335b9b29 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 156 7.0E-5 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_18880 135da6bf4e9f07d2f21e1a88335b9b29 217 SUPERFAMILY SSF51161 9 213 7.9E-36 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG62_13530 583976258481025e6adf811c57a4920c 1089 Pfam PF01464 Transglycosylase SLT domain 137 239 1.8E-24 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 CDG62_13530 583976258481025e6adf811c57a4920c 1089 SUPERFAMILY SSF54106 855 898 1.57E-8 T 23-10-2018 CDG62_13530 583976258481025e6adf811c57a4920c 1089 SUPERFAMILY SSF54106 924 967 6.67E-9 T 23-10-2018 CDG62_13530 583976258481025e6adf811c57a4920c 1089 SUPERFAMILY SSF54106 595 639 3.27E-9 T 23-10-2018 CDG62_13530 583976258481025e6adf811c57a4920c 1089 SUPERFAMILY SSF54106 803 847 9.81E-10 T 23-10-2018 CDG62_13530 583976258481025e6adf811c57a4920c 1089 SUPERFAMILY SSF53955 129 288 9.0E-43 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG62_13530 583976258481025e6adf811c57a4920c 1089 Gene3D G3DSA:3.10.350.10 980 1041 8.2E-14 T 23-10-2018 IPR036779 LysM domain superfamily CDG62_13530 583976258481025e6adf811c57a4920c 1089 Gene3D G3DSA:3.10.350.10 651 720 7.5E-12 T 23-10-2018 IPR036779 LysM domain superfamily CDG62_13530 583976258481025e6adf811c57a4920c 1089 Gene3D G3DSA:3.10.350.10 1042 1089 3.4E-13 T 23-10-2018 IPR036779 LysM domain superfamily CDG62_13530 583976258481025e6adf811c57a4920c 1089 Gene3D G3DSA:3.10.350.10 587 650 5.9E-13 T 23-10-2018 IPR036779 LysM domain superfamily CDG62_13530 583976258481025e6adf811c57a4920c 1089 Gene3D G3DSA:3.10.350.10 912 979 4.1E-14 T 23-10-2018 IPR036779 LysM domain superfamily CDG62_13530 583976258481025e6adf811c57a4920c 1089 Gene3D G3DSA:3.10.350.10 789 850 1.2E-15 T 23-10-2018 IPR036779 LysM domain superfamily CDG62_13530 583976258481025e6adf811c57a4920c 1089 Gene3D G3DSA:3.10.350.10 851 911 3.2E-12 T 23-10-2018 IPR036779 LysM domain superfamily CDG62_13530 583976258481025e6adf811c57a4920c 1089 SUPERFAMILY SSF54106 662 706 2.62E-7 T 23-10-2018 CDG62_13530 583976258481025e6adf811c57a4920c 1089 SMART SM00257 731 776 0.0013 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 SMART SM00257 924 968 3.1E-11 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 SMART SM00257 663 707 7.2E-11 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 SMART SM00257 995 1039 7.6E-15 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 SMART SM00257 596 640 4.3E-6 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 SMART SM00257 1044 1088 1.3E-12 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 SMART SM00257 803 847 1.0E-14 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 SMART SM00257 855 899 2.6E-11 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 SUPERFAMILY SSF54106 730 777 1.05E-5 T 23-10-2018 CDG62_13530 583976258481025e6adf811c57a4920c 1089 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 150 178 - T 23-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CDG62_13530 583976258481025e6adf811c57a4920c 1089 SUPERFAMILY SSF54106 995 1039 6.54E-9 T 23-10-2018 CDG62_13530 583976258481025e6adf811c57a4920c 1089 Gene3D G3DSA:1.10.530.10 127 277 1.5E-31 T 23-10-2018 CDG62_13530 583976258481025e6adf811c57a4920c 1089 SUPERFAMILY SSF54106 1043 1088 2.22E-9 T 23-10-2018 CDG62_13530 583976258481025e6adf811c57a4920c 1089 Gene3D G3DSA:3.10.350.10 721 788 3.0E-8 T 23-10-2018 IPR036779 LysM domain superfamily CDG62_13530 583976258481025e6adf811c57a4920c 1089 Pfam PF01476 LysM domain 856 898 1.9E-10 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 Pfam PF01476 LysM domain 1045 1088 3.9E-12 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 Pfam PF01476 LysM domain 996 1039 4.3E-12 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 Pfam PF01476 LysM domain 664 706 5.4E-10 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 Pfam PF01476 LysM domain 732 776 3.2E-6 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 Pfam PF01476 LysM domain 597 637 2.3E-10 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 Pfam PF01476 LysM domain 804 847 2.1E-12 T 23-10-2018 IPR018392 LysM domain CDG62_13530 583976258481025e6adf811c57a4920c 1089 Pfam PF01476 LysM domain 925 967 2.1E-11 T 23-10-2018 IPR018392 LysM domain CDG62_13900 e86cd5da02a74f07c9031398aa74002d 264 SUPERFAMILY SSF54862 10 142 9.3E-25 T 23-10-2018 CDG62_13900 e86cd5da02a74f07c9031398aa74002d 264 Pfam PF14697 4Fe-4S dicluster domain 85 138 1.8E-15 T 23-10-2018 CDG62_13900 e86cd5da02a74f07c9031398aa74002d 264 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 122 133 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG62_13900 e86cd5da02a74f07c9031398aa74002d 264 Gene3D G3DSA:3.30.70.20 114 161 6.5E-6 T 23-10-2018 CDG62_13900 e86cd5da02a74f07c9031398aa74002d 264 Pfam PF04060 Putative Fe-S cluster 15 47 2.1E-9 T 23-10-2018 IPR007202 4Fe-4S domain GO:0051536 CDG62_13900 e86cd5da02a74f07c9031398aa74002d 264 Gene3D G3DSA:3.20.20.20 6 68 2.3E-6 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_13900 e86cd5da02a74f07c9031398aa74002d 264 Gene3D G3DSA:3.30.70.20 69 110 3.2E-6 T 23-10-2018 CDG62_13900 e86cd5da02a74f07c9031398aa74002d 264 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 5 146 4.0E-55 T 23-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 CDG62_11280 8b85aa326fdeb9d39620bf26fba4a354 246 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 12 242 4.3E-82 T 23-10-2018 IPR017792 Urea carboxylase-associated protein 2 CDG62_11280 8b85aa326fdeb9d39620bf26fba4a354 246 Pfam PF09347 Domain of unknown function (DUF1989) 16 186 1.1E-39 T 23-10-2018 IPR018959 Protein of unknown function DUF1989 CDG62_04680 27c9863d0aea43a25cb2ea2b6af316b4 402 Gene3D G3DSA:3.90.1150.10 259 395 1.1E-27 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_04680 27c9863d0aea43a25cb2ea2b6af316b4 402 PIRSF PIRSF001434 1 395 3.4E-96 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG62_04680 27c9863d0aea43a25cb2ea2b6af316b4 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 392 2.2E-69 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG62_04680 27c9863d0aea43a25cb2ea2b6af316b4 402 Gene3D G3DSA:3.40.640.10 1 256 7.1E-50 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_04680 27c9863d0aea43a25cb2ea2b6af316b4 402 SUPERFAMILY SSF53383 24 393 6.34E-69 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_01315 258e84dc647145f8127bde2db7d12dc0 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.7E-12 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_01315 258e84dc647145f8127bde2db7d12dc0 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.7E-12 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_01315 258e84dc647145f8127bde2db7d12dc0 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.7E-12 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_01315 258e84dc647145f8127bde2db7d12dc0 152 SMART SM00422 1 70 9.4E-33 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_01315 258e84dc647145f8127bde2db7d12dc0 152 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 9.8E-52 T 23-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 CDG62_01315 258e84dc647145f8127bde2db7d12dc0 152 Pfam PF09278 MerR, DNA binding 44 107 1.9E-21 T 23-10-2018 IPR015358 Transcription regulator MerR, DNA binding CDG62_01315 258e84dc647145f8127bde2db7d12dc0 152 Gene3D G3DSA:1.10.1660.10 1 125 9.1E-39 T 23-10-2018 CDG62_01315 258e84dc647145f8127bde2db7d12dc0 152 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_01315 258e84dc647145f8127bde2db7d12dc0 152 Pfam PF00376 MerR family regulatory protein 2 39 1.0E-15 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_01315 258e84dc647145f8127bde2db7d12dc0 152 SUPERFAMILY SSF46955 1 126 1.21E-41 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily CDG62_09330 c411b3e925b05dca6651c01b5f229a4b 349 SMART SM00859 3 141 7.8E-61 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDG62_09330 c411b3e925b05dca6651c01b5f229a4b 349 Gene3D G3DSA:3.30.360.10 147 317 3.8E-128 T 23-10-2018 CDG62_09330 c411b3e925b05dca6651c01b5f229a4b 349 Gene3D G3DSA:3.40.50.720 4 335 3.8E-128 T 23-10-2018 CDG62_09330 c411b3e925b05dca6651c01b5f229a4b 349 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 343 42.627 T 23-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG62_09330 c411b3e925b05dca6651c01b5f229a4b 349 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 141 1.0E-38 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDG62_09330 c411b3e925b05dca6651c01b5f229a4b 349 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 23-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG62_09330 c411b3e925b05dca6651c01b5f229a4b 349 SUPERFAMILY SSF51735 2 164 2.22E-54 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_09330 c411b3e925b05dca6651c01b5f229a4b 349 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 349 6.9E-128 T 23-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG62_09330 c411b3e925b05dca6651c01b5f229a4b 349 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 158 320 3.4E-19 T 23-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG62_09330 c411b3e925b05dca6651c01b5f229a4b 349 SUPERFAMILY SSF55347 149 317 2.15E-46 T 23-10-2018 CDG62_12230 e1f626e0503e25a8a01a0a456e8ee0e4 500 Gene3D G3DSA:3.40.640.10 123 485 4.5E-106 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_12230 e1f626e0503e25a8a01a0a456e8ee0e4 500 SUPERFAMILY SSF46785 23 88 6.49E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_12230 e1f626e0503e25a8a01a0a456e8ee0e4 500 SMART SM00345 27 86 1.6E-18 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_12230 e1f626e0503e25a8a01a0a456e8ee0e4 500 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 7.0E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_12230 e1f626e0503e25a8a01a0a456e8ee0e4 500 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 7.0E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_12230 e1f626e0503e25a8a01a0a456e8ee0e4 500 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 86 2.0E-16 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_12230 e1f626e0503e25a8a01a0a456e8ee0e4 500 SUPERFAMILY SSF53383 117 492 6.05E-81 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_12230 e1f626e0503e25a8a01a0a456e8ee0e4 500 Gene3D G3DSA:1.10.10.10 13 98 1.2E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_12230 e1f626e0503e25a8a01a0a456e8ee0e4 500 Pfam PF00155 Aminotransferase class I and II 165 453 6.0E-15 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG62_15365 7aec942e86a691a48e25fec9e05be2a5 307 Pfam PF00698 Acyl transferase domain 53 270 1.1E-9 T 23-10-2018 IPR014043 Acyl transferase CDG62_15365 7aec942e86a691a48e25fec9e05be2a5 307 Gene3D G3DSA:3.40.366.10 4 274 3.8E-47 T 23-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 CDG62_15365 7aec942e86a691a48e25fec9e05be2a5 307 Gene3D G3DSA:3.30.70.250 121 186 3.8E-47 T 23-10-2018 CDG62_15365 7aec942e86a691a48e25fec9e05be2a5 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 298 1.5E-8 T 23-10-2018 IPR020801 Polyketide synthase, acyl transferase domain CDG62_15365 7aec942e86a691a48e25fec9e05be2a5 307 SUPERFAMILY SSF52151 3 289 3.4E-37 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG62_16425 3a990d88aa33aa25adaa7ea208aa7d8c 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG62_16425 3a990d88aa33aa25adaa7ea208aa7d8c 547 SUPERFAMILY SSF56801 10 540 2.49E-148 T 23-10-2018 CDG62_16425 3a990d88aa33aa25adaa7ea208aa7d8c 547 Gene3D G3DSA:3.40.50.12780 8 440 2.8E-111 T 23-10-2018 CDG62_16425 3a990d88aa33aa25adaa7ea208aa7d8c 547 Gene3D G3DSA:3.30.300.310 441 544 2.0E-34 T 23-10-2018 CDG62_16425 3a990d88aa33aa25adaa7ea208aa7d8c 547 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 528 2.5E-19 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG62_16425 3a990d88aa33aa25adaa7ea208aa7d8c 547 Pfam PF00501 AMP-binding enzyme 25 445 9.3E-100 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG62_08905 3fdf12092007ab37dc5378a230834617 743 Pfam PF00593 TonB dependent receptor 274 742 5.6E-37 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_08905 3fdf12092007ab37dc5378a230834617 743 Gene3D G3DSA:2.40.170.20 192 743 7.8E-136 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_08905 3fdf12092007ab37dc5378a230834617 743 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 87 743 9.4E-87 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDG62_08905 3fdf12092007ab37dc5378a230834617 743 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 726 743 - T 23-10-2018 IPR010917 TonB-dependent receptor, conserved site CDG62_08905 3fdf12092007ab37dc5378a230834617 743 SUPERFAMILY SSF56935 49 743 1.67E-103 T 23-10-2018 CDG62_08905 3fdf12092007ab37dc5378a230834617 743 Gene3D G3DSA:2.170.130.10 62 189 7.0E-32 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_08905 3fdf12092007ab37dc5378a230834617 743 Pfam PF07715 TonB-dependent Receptor Plug Domain 85 180 4.4E-12 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_04150 a4c13407630c528b7b5968017ab8a361 498 SUPERFAMILY SSF53244 333 484 2.35E-47 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG62_04150 a4c13407630c528b7b5968017ab8a361 498 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 415 3.0E-19 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CDG62_04150 a4c13407630c528b7b5968017ab8a361 498 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 483 4.5E-142 T 23-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CDG62_04150 a4c13407630c528b7b5968017ab8a361 498 SUPERFAMILY SSF63418 12 90 1.7E-8 T 23-10-2018 IPR035911 MurE/MurF, N-terminal CDG62_04150 a4c13407630c528b7b5968017ab8a361 498 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 484 30.628 T 23-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CDG62_04150 a4c13407630c528b7b5968017ab8a361 498 SUPERFAMILY SSF53623 101 331 4.97E-68 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG62_04150 a4c13407630c528b7b5968017ab8a361 498 Gene3D G3DSA:3.40.1390.10 4 94 3.1E-8 T 23-10-2018 CDG62_04150 a4c13407630c528b7b5968017ab8a361 498 Pfam PF08245 Mur ligase middle domain 108 311 2.0E-49 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDG62_04150 a4c13407630c528b7b5968017ab8a361 498 Gene3D G3DSA:3.40.1190.10 101 336 1.7E-70 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG62_04150 a4c13407630c528b7b5968017ab8a361 498 Gene3D G3DSA:3.90.190.20 339 496 9.7E-57 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG62_15955 a44b874ee863b43bb4c6f2a5a6818d77 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 2.8E-67 T 23-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CDG62_15955 a44b874ee863b43bb4c6f2a5a6818d77 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 23-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_15955 a44b874ee863b43bb4c6f2a5a6818d77 156 PIRSF PIRSF002122 3 156 2.0E-58 T 23-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 CDG62_15955 a44b874ee863b43bb4c6f2a5a6818d77 156 SUPERFAMILY SSF47973 6 149 4.71E-59 T 23-10-2018 IPR036823 Ribosomal protein S7 domain superfamily CDG62_15955 a44b874ee863b43bb4c6f2a5a6818d77 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.028 T 23-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CDG62_15955 a44b874ee863b43bb4c6f2a5a6818d77 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.2E-64 T 23-10-2018 IPR023798 Ribosomal protein S7 domain CDG62_15955 a44b874ee863b43bb4c6f2a5a6818d77 156 Gene3D G3DSA:1.10.455.10 2 155 3.7E-59 T 23-10-2018 IPR036823 Ribosomal protein S7 domain superfamily CDG62_12880 f9d3c65cea2302ba12b16723aff9ecf1 138 SUPERFAMILY SSF54637 20 137 5.34E-22 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_12880 f9d3c65cea2302ba12b16723aff9ecf1 138 Pfam PF03061 Thioesterase superfamily 47 117 1.6E-7 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDG62_12880 f9d3c65cea2302ba12b16723aff9ecf1 138 Gene3D G3DSA:3.10.129.10 5 138 2.5E-47 T 23-10-2018 CDG62_05880 b3590aaf5f8e97ac0ade69ec280a182a 437 Pfam PF07690 Major Facilitator Superfamily 277 429 4.1E-9 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_05880 b3590aaf5f8e97ac0ade69ec280a182a 437 ProSitePatterns PS00216 Sugar transport proteins signature 1. 302 317 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_05880 b3590aaf5f8e97ac0ade69ec280a182a 437 Gene3D G3DSA:1.20.1250.20 16 436 8.5E-63 T 23-10-2018 CDG62_05880 b3590aaf5f8e97ac0ade69ec280a182a 437 Pfam PF00083 Sugar (and other) transporter 21 228 3.0E-23 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CDG62_05880 b3590aaf5f8e97ac0ade69ec280a182a 437 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 27 419 8.2E-138 T 23-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 CDG62_05880 b3590aaf5f8e97ac0ade69ec280a182a 437 SUPERFAMILY SSF103473 16 432 7.72E-64 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_03485 355db98ba8509747565320393628f302 272 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 14 268 7.7E-66 T 23-10-2018 CDG62_03485 355db98ba8509747565320393628f302 272 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 14 270 1.0E-69 T 23-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CDG62_03485 355db98ba8509747565320393628f302 272 SUPERFAMILY SSF56219 14 271 4.71E-72 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDG62_03485 355db98ba8509747565320393628f302 272 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 18 263 7.9E-21 T 23-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase CDG62_03485 355db98ba8509747565320393628f302 272 Gene3D G3DSA:3.60.10.10 12 272 3.6E-81 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDG62_15575 212be3a9235ecafbc372ab6e4c12ee14 235 SUPERFAMILY SSF52172 1 178 2.42E-36 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_15575 212be3a9235ecafbc372ab6e4c12ee14 235 SMART SM00448 4 116 1.9E-34 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_15575 212be3a9235ecafbc372ab6e4c12ee14 235 Gene3D G3DSA:1.10.10.10 125 231 3.6E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15575 212be3a9235ecafbc372ab6e4c12ee14 235 SMART SM00862 150 224 4.0E-19 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_15575 212be3a9235ecafbc372ab6e4c12ee14 235 Gene3D G3DSA:3.40.50.2300 1 124 6.7E-35 T 23-10-2018 CDG62_15575 212be3a9235ecafbc372ab6e4c12ee14 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 2.8E-20 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_15575 212be3a9235ecafbc372ab6e4c12ee14 235 Pfam PF00072 Response regulator receiver domain 6 116 4.7E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_13915 3d6ce187b3611805fa932640d04829c6 219 TIGRFAM TIGR01351 adk: adenylate kinase 2 208 2.2E-72 T 23-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CDG62_13915 3d6ce187b3611805fa932640d04829c6 219 Pfam PF00406 Adenylate kinase 5 185 5.4E-54 T 23-10-2018 CDG62_13915 3d6ce187b3611805fa932640d04829c6 219 Hamap MF_00235 Adenylate kinase [adk]. 1 216 50.592 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDG62_13915 3d6ce187b3611805fa932640d04829c6 219 SUPERFAMILY SSF52540 1 191 9.65E-46 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_13915 3d6ce187b3611805fa932640d04829c6 219 PRINTS PR00094 Adenylate kinase signature 32 46 4.2E-31 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDG62_13915 3d6ce187b3611805fa932640d04829c6 219 PRINTS PR00094 Adenylate kinase signature 156 171 4.2E-31 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDG62_13915 3d6ce187b3611805fa932640d04829c6 219 PRINTS PR00094 Adenylate kinase signature 4 17 4.2E-31 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDG62_13915 3d6ce187b3611805fa932640d04829c6 219 PRINTS PR00094 Adenylate kinase signature 173 187 4.2E-31 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDG62_13915 3d6ce187b3611805fa932640d04829c6 219 PRINTS PR00094 Adenylate kinase signature 81 97 4.2E-31 T 23-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDG62_13915 3d6ce187b3611805fa932640d04829c6 219 Pfam PF05191 Adenylate kinase, active site lid 123 158 3.1E-16 T 23-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CDG62_13915 3d6ce187b3611805fa932640d04829c6 219 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 23-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CDG62_13915 3d6ce187b3611805fa932640d04829c6 219 Gene3D G3DSA:3.40.50.300 1 219 1.6E-78 T 23-10-2018 CDG62_11915 50e85b3726e0138680717f3a4bbba129 231 Pfam PF00027 Cyclic nucleotide-binding domain 36 119 6.6E-17 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain CDG62_11915 50e85b3726e0138680717f3a4bbba129 231 SMART SM00100 15 136 7.7E-7 T 23-10-2018 IPR000595 Cyclic nucleotide-binding domain CDG62_11915 50e85b3726e0138680717f3a4bbba129 231 SMART SM00419 171 219 0.0016 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDG62_11915 50e85b3726e0138680717f3a4bbba129 231 Gene3D G3DSA:1.10.10.10 150 230 4.0E-16 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_11915 50e85b3726e0138680717f3a4bbba129 231 SUPERFAMILY SSF46785 150 228 2.62E-14 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_11915 50e85b3726e0138680717f3a4bbba129 231 Pfam PF13545 Crp-like helix-turn-helix domain 153 225 2.4E-14 T 23-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CDG62_11915 50e85b3726e0138680717f3a4bbba129 231 Gene3D G3DSA:2.60.120.10 2 148 6.2E-28 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG62_11915 50e85b3726e0138680717f3a4bbba129 231 SUPERFAMILY SSF51206 10 139 3.27E-30 T 23-10-2018 IPR018490 Cyclic nucleotide-binding-like CDG62_19015 db92b0dcb15247c59d9572648754ae56 118 Pfam PF11776 Nickel/cobalt transporter regulator 65 114 1.4E-14 T 23-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CDG62_19015 db92b0dcb15247c59d9572648754ae56 118 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 62 116 9.0E-10 T 23-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CDG62_19015 db92b0dcb15247c59d9572648754ae56 118 Gene3D G3DSA:3.10.450.160 46 118 5.9E-13 T 23-10-2018 CDG62_18510 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.2E-7 T 23-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18510 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.2E-7 T 23-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18510 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.2E-7 T 23-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18510 94b12579d392b38dd17e2e4359e55ecc 81 Pfam PF00137 ATP synthase subunit C 10 72 8.8E-9 T 23-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CDG62_18510 94b12579d392b38dd17e2e4359e55ecc 81 Gene3D G3DSA:1.20.20.10 1 77 3.0E-27 T 23-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18510 94b12579d392b38dd17e2e4359e55ecc 81 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 23-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18510 94b12579d392b38dd17e2e4359e55ecc 81 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.2E-28 T 23-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CDG62_18510 94b12579d392b38dd17e2e4359e55ecc 81 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.695 T 23-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18510 94b12579d392b38dd17e2e4359e55ecc 81 SUPERFAMILY SSF81333 2 78 4.05E-18 T 23-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily CDG62_18555 3fc926dc644b50b0ba07a254ba2caafd 306 Pfam PF04261 Dyp-type peroxidase family 35 298 1.3E-70 T 23-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CDG62_18555 3fc926dc644b50b0ba07a254ba2caafd 306 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 4 297 7.5E-67 T 23-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CDG62_18555 3fc926dc644b50b0ba07a254ba2caafd 306 SUPERFAMILY SSF54909 3 302 6.44E-88 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_10620 1a22e32444499063b887c19b8a7010e5 128 Pfam PF01592 NifU-like N terminal domain 2 127 1.7E-56 T 23-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CDG62_10620 1a22e32444499063b887c19b8a7010e5 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.0E-67 T 23-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CDG62_10620 1a22e32444499063b887c19b8a7010e5 128 SUPERFAMILY SSF82649 1 125 1.52E-48 T 23-10-2018 CDG62_10620 1a22e32444499063b887c19b8a7010e5 128 Gene3D G3DSA:3.90.1010.10 1 128 8.1E-58 T 23-10-2018 CDG62_07575 cb7ce3cc9f2cab42ad780ad3db4c2b5d 311 Pfam PF00005 ABC transporter 21 165 3.4E-31 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_07575 cb7ce3cc9f2cab42ad780ad3db4c2b5d 311 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_07575 cb7ce3cc9f2cab42ad780ad3db4c2b5d 311 Gene3D G3DSA:3.40.50.300 1 236 6.9E-63 T 23-10-2018 CDG62_07575 cb7ce3cc9f2cab42ad780ad3db4c2b5d 311 SMART SM00382 30 213 7.0E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_07575 cb7ce3cc9f2cab42ad780ad3db4c2b5d 311 SUPERFAMILY SSF52540 4 232 4.67E-63 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_07330 69cd624abd8c28f52cc6affd418fa7e8 293 Gene3D G3DSA:1.20.120.1780 174 293 8.9E-13 T 23-10-2018 CDG62_07330 69cd624abd8c28f52cc6affd418fa7e8 293 Gene3D G3DSA:1.10.357.140 26 173 6.0E-39 T 23-10-2018 CDG62_07330 69cd624abd8c28f52cc6affd418fa7e8 293 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 13 291 1.0E-94 T 23-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CDG62_07330 69cd624abd8c28f52cc6affd418fa7e8 293 Pfam PF01040 UbiA prenyltransferase family 31 273 2.0E-57 T 23-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CDG62_07330 69cd624abd8c28f52cc6affd418fa7e8 293 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 8 292 28.01 T 23-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CDG62_06780 f7aa485f7250838a8a75881fdbebc09e 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 197 313 5.8E-30 T 23-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CDG62_06780 f7aa485f7250838a8a75881fdbebc09e 317 Gene3D G3DSA:3.40.50.2020 7 302 7.0E-132 T 23-10-2018 CDG62_06780 f7aa485f7250838a8a75881fdbebc09e 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 314 8.4E-122 T 23-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CDG62_06780 f7aa485f7250838a8a75881fdbebc09e 317 SMART SM01400 4 121 2.0E-77 T 23-10-2018 CDG62_06780 f7aa485f7250838a8a75881fdbebc09e 317 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 48.752 T 23-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CDG62_06780 f7aa485f7250838a8a75881fdbebc09e 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 23-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CDG62_06780 f7aa485f7250838a8a75881fdbebc09e 317 Gene3D G3DSA:3.40.50.2020 148 290 7.0E-132 T 23-10-2018 CDG62_06780 f7aa485f7250838a8a75881fdbebc09e 317 SUPERFAMILY SSF53271 69 306 2.14E-65 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG62_06780 f7aa485f7250838a8a75881fdbebc09e 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 8.4E-50 T 23-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 23-10-2018 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 SUPERFAMILY SSF82693 39 132 1.92E-27 T 23-10-2018 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 SUPERFAMILY SSF82714 720 804 1.31E-16 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 Gene3D G3DSA:3.30.2090.10 718 806 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 Gene3D G3DSA:1.20.1640.10 9 509 0.0 T 23-10-2018 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1032 0.0 T 23-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 SUPERFAMILY SSF82693 137 331 6.28E-21 T 23-10-2018 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 Gene3D G3DSA:3.30.70.1430 39 814 0.0 T 23-10-2018 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 Gene3D G3DSA:3.30.70.1430 564 665 0.0 T 23-10-2018 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 SUPERFAMILY SSF82693 562 668 1.94E-21 T 23-10-2018 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 3.7E-101 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 3.7E-101 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 3.7E-101 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 3.7E-101 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 3.7E-101 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 3.7E-101 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 3.7E-101 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 3.7E-101 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 3.7E-101 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 SUPERFAMILY SSF82866 806 1025 7.32E-40 T 23-10-2018 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 SUPERFAMILY SSF82714 183 273 1.12E-20 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 Pfam PF00873 AcrB/AcrD/AcrF family 3 1022 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 Gene3D G3DSA:1.20.1640.10 510 1018 0.0 T 23-10-2018 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 Gene3D G3DSA:3.30.70.1440 666 861 0.0 T 23-10-2018 CDG62_07130 601edcd6a6d68dbd88dc04248b5d22ad 1034 SUPERFAMILY SSF82866 297 498 1.05E-46 T 23-10-2018 CDG62_10425 30264ab627868a940557711c2a96fcea 342 Gene3D G3DSA:3.30.43.10 1 71 2.3E-19 T 23-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CDG62_10425 30264ab627868a940557711c2a96fcea 342 SUPERFAMILY SSF56176 9 197 7.77E-39 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG62_10425 30264ab627868a940557711c2a96fcea 342 Gene3D G3DSA:3.30.465.10 73 222 3.4E-51 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG62_10425 30264ab627868a940557711c2a96fcea 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 72.151 T 23-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_10425 30264ab627868a940557711c2a96fcea 342 Gene3D G3DSA:3.90.78.10 223 341 1.1E-38 T 23-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_10425 30264ab627868a940557711c2a96fcea 342 Pfam PF01565 FAD binding domain 22 145 4.0E-22 T 23-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CDG62_10425 30264ab627868a940557711c2a96fcea 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 329 7.8E-64 T 23-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_10425 30264ab627868a940557711c2a96fcea 342 SUPERFAMILY SSF56194 207 335 1.7E-42 T 23-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_10425 30264ab627868a940557711c2a96fcea 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 211 332 1.9E-29 T 23-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_02710 02bd9c4916599d417b36b8a53d12e06a 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 237 7.7E-18 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_02710 02bd9c4916599d417b36b8a53d12e06a 243 SMART SM00448 13 123 3.6E-40 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_02710 02bd9c4916599d417b36b8a53d12e06a 243 SUPERFAMILY SSF46894 134 237 3.97E-20 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG62_02710 02bd9c4916599d417b36b8a53d12e06a 243 Pfam PF00072 Response regulator receiver domain 15 123 2.2E-29 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_02710 02bd9c4916599d417b36b8a53d12e06a 243 SMART SM00862 163 237 5.0E-16 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_02710 02bd9c4916599d417b36b8a53d12e06a 243 SUPERFAMILY SSF52172 9 138 2.42E-41 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_02710 02bd9c4916599d417b36b8a53d12e06a 243 Gene3D G3DSA:1.10.10.10 141 243 1.6E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_02710 02bd9c4916599d417b36b8a53d12e06a 243 Gene3D G3DSA:3.40.50.2300 7 140 3.1E-38 T 23-10-2018 CDG62_14250 568b57924109098623f342496a9da9d5 161 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 9 160 6.1E-41 T 23-10-2018 IPR023635 Peptide deformylase CDG62_14250 568b57924109098623f342496a9da9d5 161 PIRSF PIRSF004749 2 161 2.2E-46 T 23-10-2018 IPR023635 Peptide deformylase CDG62_14250 568b57924109098623f342496a9da9d5 161 Gene3D G3DSA:3.90.45.10 1 161 2.8E-52 T 23-10-2018 IPR036821 Peptide deformylase superfamily CDG62_14250 568b57924109098623f342496a9da9d5 161 Pfam PF01327 Polypeptide deformylase 6 160 1.5E-43 T 23-10-2018 IPR023635 Peptide deformylase CDG62_14250 568b57924109098623f342496a9da9d5 161 PRINTS PR01576 Peptide deformylase signature 113 131 1.1E-29 T 23-10-2018 IPR023635 Peptide deformylase CDG62_14250 568b57924109098623f342496a9da9d5 161 PRINTS PR01576 Peptide deformylase signature 132 161 1.1E-29 T 23-10-2018 IPR023635 Peptide deformylase CDG62_14250 568b57924109098623f342496a9da9d5 161 PRINTS PR01576 Peptide deformylase signature 37 66 1.1E-29 T 23-10-2018 IPR023635 Peptide deformylase CDG62_14250 568b57924109098623f342496a9da9d5 161 PRINTS PR01576 Peptide deformylase signature 101 112 1.1E-29 T 23-10-2018 IPR023635 Peptide deformylase CDG62_14250 568b57924109098623f342496a9da9d5 161 Hamap MF_00163 Peptide deformylase [def]. 3 161 23.691 T 23-10-2018 IPR023635 Peptide deformylase CDG62_14250 568b57924109098623f342496a9da9d5 161 SUPERFAMILY SSF56420 4 161 2.09E-50 T 23-10-2018 IPR036821 Peptide deformylase superfamily CDG62_15335 b9f1871edd71a594dda983dce8ef6d52 639 Gene3D G3DSA:3.90.780.10 424 628 2.2E-51 T 23-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG62_15335 b9f1871edd71a594dda983dce8ef6d52 639 PRINTS PR01607 Apyrase family signature 246 263 1.9E-31 T 23-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG62_15335 b9f1871edd71a594dda983dce8ef6d52 639 PRINTS PR01607 Apyrase family signature 485 508 1.9E-31 T 23-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG62_15335 b9f1871edd71a594dda983dce8ef6d52 639 PRINTS PR01607 Apyrase family signature 265 288 1.9E-31 T 23-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG62_15335 b9f1871edd71a594dda983dce8ef6d52 639 PRINTS PR01607 Apyrase family signature 312 332 1.9E-31 T 23-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG62_15335 b9f1871edd71a594dda983dce8ef6d52 639 PRINTS PR01607 Apyrase family signature 564 583 1.9E-31 T 23-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG62_15335 b9f1871edd71a594dda983dce8ef6d52 639 PRINTS PR01607 Apyrase family signature 49 67 1.9E-31 T 23-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG62_15335 b9f1871edd71a594dda983dce8ef6d52 639 Pfam PF00149 Calcineurin-like phosphoesterase 52 282 9.0E-9 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDG62_15335 b9f1871edd71a594dda983dce8ef6d52 639 SUPERFAMILY SSF56300 50 356 7.37E-71 T 23-10-2018 CDG62_15335 b9f1871edd71a594dda983dce8ef6d52 639 Gene3D G3DSA:3.60.21.10 41 406 5.9E-107 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like CDG62_15335 b9f1871edd71a594dda983dce8ef6d52 639 SUPERFAMILY SSF55816 443 616 8.37E-42 T 23-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG62_15335 b9f1871edd71a594dda983dce8ef6d52 639 ProSitePatterns PS00786 5'-nucleotidase signature 2. 138 149 - T 23-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG62_15335 b9f1871edd71a594dda983dce8ef6d52 639 Pfam PF02872 5'-nucleotidase, C-terminal domain 447 590 5.2E-31 T 23-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG62_15335 b9f1871edd71a594dda983dce8ef6d52 639 ProSitePatterns PS00785 5'-nucleotidase signature 1. 51 63 - T 23-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CDG62_18860 885b6cbd89f04f0e4acc950d5d2fa332 418 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 299 403 7.9E-24 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG62_18860 885b6cbd89f04f0e4acc950d5d2fa332 418 Gene3D G3DSA:3.40.50.720 1 185 4.0E-16 T 23-10-2018 CDG62_18860 885b6cbd89f04f0e4acc950d5d2fa332 418 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 399 1.3E-56 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDG62_18860 885b6cbd89f04f0e4acc950d5d2fa332 418 SUPERFAMILY SSF51735 1 187 3.66E-12 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_18860 885b6cbd89f04f0e4acc950d5d2fa332 418 SMART SM00984 299 403 2.2E-34 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG62_18860 885b6cbd89f04f0e4acc950d5d2fa332 418 PIRSF PIRSF500134 1 418 4.4E-114 T 23-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CDG62_18860 885b6cbd89f04f0e4acc950d5d2fa332 418 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 185 275 9.4E-25 T 23-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG62_18860 885b6cbd89f04f0e4acc950d5d2fa332 418 PIRSF PIRSF000124 1 418 2.5E-110 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDG62_18860 885b6cbd89f04f0e4acc950d5d2fa332 418 Gene3D G3DSA:3.40.50.720 214 418 1.6E-61 T 23-10-2018 CDG62_18860 885b6cbd89f04f0e4acc950d5d2fa332 418 SUPERFAMILY SSF48179 184 280 2.89E-23 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_18860 885b6cbd89f04f0e4acc950d5d2fa332 418 Gene3D G3DSA:1.20.5.100 186 213 3.5E-10 T 23-10-2018 CDG62_18860 885b6cbd89f04f0e4acc950d5d2fa332 418 SUPERFAMILY SSF52413 284 413 7.46E-30 T 23-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 CDG62_13730 0e43aa052f0e4d7ffa437d2662e33d81 94 SUPERFAMILY SSF102829 6 85 5.89E-13 T 23-10-2018 IPR036192 Cell division protein ZapA-like superfamily CDG62_13730 0e43aa052f0e4d7ffa437d2662e33d81 94 Gene3D G3DSA:1.10.20.30 1 46 1.8E-6 T 23-10-2018 CDG62_13730 0e43aa052f0e4d7ffa437d2662e33d81 94 Pfam PF05164 Cell division protein ZapA 7 78 3.8E-12 T 23-10-2018 IPR007838 Cell division protein ZapA-like CDG62_01820 a3fcbe93a08d1078f772a129f74bfbe3 195 TIGRFAM TIGR04431 N6_acetyl_AAC6: aminoglycoside N(6')-acetyltransferase, AacA4 family 13 195 5.2E-117 T 23-10-2018 IPR030971 Aminoglycoside N(6')-acetyltransferase, AacA4 type CDG62_01820 a3fcbe93a08d1078f772a129f74bfbe3 195 Pfam PF13523 Acetyltransferase (GNAT) domain 26 172 1.0E-39 T 23-10-2018 CDG62_01820 a3fcbe93a08d1078f772a129f74bfbe3 195 SUPERFAMILY SSF55729 13 186 9.55E-47 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_01820 a3fcbe93a08d1078f772a129f74bfbe3 195 Gene3D G3DSA:3.40.630.30 7 195 1.2E-61 T 23-10-2018 CDG62_05425 dbacb7fb2bc5bcb99af33f07a74dc32d 389 PIRSF PIRSF500134 338 389 0.017 T 23-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CDG62_05425 dbacb7fb2bc5bcb99af33f07a74dc32d 389 PIRSF PIRSF500134 1 342 7.4E-121 T 23-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CDG62_05425 dbacb7fb2bc5bcb99af33f07a74dc32d 389 SUPERFAMILY SSF52413 283 387 3.92E-27 T 23-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 CDG62_05425 dbacb7fb2bc5bcb99af33f07a74dc32d 389 SMART SM00984 300 387 4.0E-13 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG62_05425 dbacb7fb2bc5bcb99af33f07a74dc32d 389 Gene3D G3DSA:1.20.5.100 194 220 2.2E-20 T 23-10-2018 CDG62_05425 dbacb7fb2bc5bcb99af33f07a74dc32d 389 PIRSF PIRSF000124 1 389 5.2E-138 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDG62_05425 dbacb7fb2bc5bcb99af33f07a74dc32d 389 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 5.8E-33 T 23-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG62_05425 dbacb7fb2bc5bcb99af33f07a74dc32d 389 Gene3D G3DSA:3.40.50.720 1 193 1.6E-59 T 23-10-2018 CDG62_05425 dbacb7fb2bc5bcb99af33f07a74dc32d 389 Gene3D G3DSA:3.40.50.720 222 388 3.4E-68 T 23-10-2018 CDG62_05425 dbacb7fb2bc5bcb99af33f07a74dc32d 389 SUPERFAMILY SSF48179 191 287 3.74E-30 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_05425 dbacb7fb2bc5bcb99af33f07a74dc32d 389 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.5E-27 T 23-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG62_05425 dbacb7fb2bc5bcb99af33f07a74dc32d 389 SUPERFAMILY SSF51735 1 194 2.89E-49 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_05425 dbacb7fb2bc5bcb99af33f07a74dc32d 389 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 5.7E-106 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDG62_11665 c45dd85f3a482b8fe6568cfdbd82011b 713 SUPERFAMILY SSF51735 250 423 2.32E-5 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_11665 c45dd85f3a482b8fe6568cfdbd82011b 713 SUPERFAMILY SSF56784 12 221 3.93E-45 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_11665 c45dd85f3a482b8fe6568cfdbd82011b 713 Gene3D G3DSA:1.10.150.240 23 89 3.7E-48 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG62_11665 c45dd85f3a482b8fe6568cfdbd82011b 713 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 187 6.3E-33 T 23-10-2018 CDG62_11665 c45dd85f3a482b8fe6568cfdbd82011b 713 Gene3D G3DSA:3.40.50.1000 13 194 3.7E-48 T 23-10-2018 IPR023214 HAD superfamily CDG62_11665 c45dd85f3a482b8fe6568cfdbd82011b 713 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 2.4E-7 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_11665 c45dd85f3a482b8fe6568cfdbd82011b 713 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 2.4E-7 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_11665 c45dd85f3a482b8fe6568cfdbd82011b 713 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 2.4E-7 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_11665 c45dd85f3a482b8fe6568cfdbd82011b 713 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 508 620 2.1E-9 T 23-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CDG62_11665 c45dd85f3a482b8fe6568cfdbd82011b 713 SUPERFAMILY SSF48179 521 661 3.4E-14 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_11665 c45dd85f3a482b8fe6568cfdbd82011b 713 Gene3D G3DSA:1.10.1040.10 523 690 5.8E-23 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDG62_11665 c45dd85f3a482b8fe6568cfdbd82011b 713 Gene3D G3DSA:3.40.50.720 247 470 3.2E-14 T 23-10-2018 CDG62_11665 c45dd85f3a482b8fe6568cfdbd82011b 713 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 52 192 7.1E-19 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_05840 4516d4965d1b15e5638c1e8fefa1aa11 147 Gene3D G3DSA:2.40.128.520 21 147 2.7E-20 T 23-10-2018 CDG62_05840 4516d4965d1b15e5638c1e8fefa1aa11 147 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 26 146 1.7E-27 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG62_13570 5d5d7d38b790d55fcd6c22a9d3d90e96 309 SUPERFAMILY SSF53850 90 299 1.29E-35 T 23-10-2018 CDG62_13570 5d5d7d38b790d55fcd6c22a9d3d90e96 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 3.2E-20 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_13570 5d5d7d38b790d55fcd6c22a9d3d90e96 309 Gene3D G3DSA:3.40.190.290 92 297 7.4E-46 T 23-10-2018 CDG62_13570 5d5d7d38b790d55fcd6c22a9d3d90e96 309 Pfam PF03466 LysR substrate binding domain 90 295 1.9E-32 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_13570 5d5d7d38b790d55fcd6c22a9d3d90e96 309 SUPERFAMILY SSF46785 5 89 2.55E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_13570 5d5d7d38b790d55fcd6c22a9d3d90e96 309 Gene3D G3DSA:1.10.10.10 3 90 5.6E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_07385 3f1252697b7c5952302fd72d7a161140 392 Gene3D G3DSA:2.40.10.120 58 280 1.2E-76 T 23-10-2018 CDG62_07385 3f1252697b7c5952302fd72d7a161140 392 SUPERFAMILY SSF50156 258 368 3.42E-21 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG62_07385 3f1252697b7c5952302fd72d7a161140 392 Gene3D G3DSA:2.30.42.10 282 388 2.1E-22 T 23-10-2018 CDG62_07385 3f1252697b7c5952302fd72d7a161140 392 SUPERFAMILY SSF50494 58 284 8.29E-62 T 23-10-2018 IPR009003 Peptidase S1, PA clan CDG62_07385 3f1252697b7c5952302fd72d7a161140 392 PRINTS PR00834 HtrA/DegQ protease family signature 241 258 3.3E-54 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG62_07385 3f1252697b7c5952302fd72d7a161140 392 PRINTS PR00834 HtrA/DegQ protease family signature 124 136 3.3E-54 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG62_07385 3f1252697b7c5952302fd72d7a161140 392 PRINTS PR00834 HtrA/DegQ protease family signature 324 336 3.3E-54 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG62_07385 3f1252697b7c5952302fd72d7a161140 392 PRINTS PR00834 HtrA/DegQ protease family signature 184 208 3.3E-54 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG62_07385 3f1252697b7c5952302fd72d7a161140 392 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 3.3E-54 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG62_07385 3f1252697b7c5952302fd72d7a161140 392 PRINTS PR00834 HtrA/DegQ protease family signature 145 165 3.3E-54 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG62_07385 3f1252697b7c5952302fd72d7a161140 392 SMART SM00228 287 366 8.2E-16 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG62_07385 3f1252697b7c5952302fd72d7a161140 392 Pfam PF13365 Trypsin-like peptidase domain 115 248 3.3E-31 T 23-10-2018 CDG62_07385 3f1252697b7c5952302fd72d7a161140 392 Pfam PF13180 PDZ domain 288 374 2.5E-17 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG62_18010 e42a04c1e46a5818aa2f55d1d48d4e21 247 SMART SM00240 22 72 3.0E-13 T 23-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CDG62_18010 e42a04c1e46a5818aa2f55d1d48d4e21 247 Gene3D G3DSA:2.60.200.20 2 102 1.1E-23 T 23-10-2018 CDG62_18010 e42a04c1e46a5818aa2f55d1d48d4e21 247 Pfam PF00498 FHA domain 24 86 1.6E-18 T 23-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CDG62_18010 e42a04c1e46a5818aa2f55d1d48d4e21 247 SUPERFAMILY SSF49879 3 95 2.49E-22 T 23-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 CDG62_08640 d3ec4b864d3a6ff59b77bd563a769928 333 Pfam PF13280 WYL domain 158 330 1.7E-26 T 23-10-2018 IPR026881 WYL domain CDG62_08640 d3ec4b864d3a6ff59b77bd563a769928 333 SUPERFAMILY SSF46785 14 57 4.01E-7 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_04940 b08abb208997addea7a29465ac8b0d5b 197 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 5 195 1.9E-44 T 23-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CDG62_04940 b08abb208997addea7a29465ac8b0d5b 197 Pfam PF03358 NADPH-dependent FMN reductase 12 126 6.3E-10 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CDG62_04940 b08abb208997addea7a29465ac8b0d5b 197 Gene3D G3DSA:3.40.50.360 1 196 4.0E-63 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_04940 b08abb208997addea7a29465ac8b0d5b 197 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 23-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CDG62_04940 b08abb208997addea7a29465ac8b0d5b 197 SUPERFAMILY SSF52218 4 196 1.4E-58 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_04280 efe1c97f25a263bd48538efec87f1359 93 Pfam PF01192 RNA polymerase Rpb6 8 59 6.6E-17 T 23-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CDG62_04280 efe1c97f25a263bd48538efec87f1359 93 SUPERFAMILY SSF63562 1 70 6.98E-25 T 23-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CDG62_04280 efe1c97f25a263bd48538efec87f1359 93 SMART SM01409 8 61 1.5E-16 T 23-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CDG62_04280 efe1c97f25a263bd48538efec87f1359 93 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.135 T 23-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_04280 efe1c97f25a263bd48538efec87f1359 93 Gene3D G3DSA:3.90.940.10 1 85 8.6E-27 T 23-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 CDG62_04280 efe1c97f25a263bd48538efec87f1359 93 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 9.6E-22 T 23-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_19250 5ab42fe244ffc098fe10daec72d36d67 129 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 12 116 2.6E-20 T 23-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CDG62_19250 5ab42fe244ffc098fe10daec72d36d67 129 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 7 116 15.873 T 23-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CDG62_19250 5ab42fe244ffc098fe10daec72d36d67 129 Gene3D G3DSA:3.30.230.10 3 120 2.2E-34 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG62_19250 5ab42fe244ffc098fe10daec72d36d67 129 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 18 108 5.0E-39 T 23-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CDG62_19250 5ab42fe244ffc098fe10daec72d36d67 129 SUPERFAMILY SSF54211 6 119 1.19E-24 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_19250 5ab42fe244ffc098fe10daec72d36d67 129 Pfam PF00825 Ribonuclease P 7 113 1.4E-23 T 23-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CDG62_19250 5ab42fe244ffc098fe10daec72d36d67 129 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 58 72 - T 23-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 CDG62_07450 6bce79f2e692b602d1d4cc28b2773fde 250 Gene3D G3DSA:3.40.50.620 1 248 7.3E-85 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_07450 6bce79f2e692b602d1d4cc28b2773fde 250 SUPERFAMILY SSF52402 1 243 1.6E-82 T 23-10-2018 CDG62_07450 6bce79f2e692b602d1d4cc28b2773fde 250 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 156 176 - T 23-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDG62_07450 6bce79f2e692b602d1d4cc28b2773fde 250 Pfam PF01012 Electron transfer flavoprotein domain 30 207 1.3E-46 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDG62_07450 6bce79f2e692b602d1d4cc28b2773fde 250 PIRSF PIRSF000090 1 250 9.9E-82 T 23-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CDG62_07450 6bce79f2e692b602d1d4cc28b2773fde 250 SMART SM00893 23 212 5.7E-68 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDG62_07515 7bcdb4006b53b11cbeaaff7e6fc37943 275 Gene3D G3DSA:3.90.230.10 10 274 1.5E-106 T 23-10-2018 CDG62_07515 7bcdb4006b53b11cbeaaff7e6fc37943 275 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 12 264 8.9E-99 T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG62_07515 7bcdb4006b53b11cbeaaff7e6fc37943 275 Pfam PF00557 Metallopeptidase family M24 19 256 5.2E-52 T 23-10-2018 IPR000994 Peptidase M24 CDG62_07515 7bcdb4006b53b11cbeaaff7e6fc37943 275 SUPERFAMILY SSF55920 10 268 1.96E-89 T 23-10-2018 IPR036005 Creatinase/aminopeptidase-like CDG62_07515 7bcdb4006b53b11cbeaaff7e6fc37943 275 Hamap MF_01974 Methionine aminopeptidase [map]. 10 265 41.394 T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG62_07515 7bcdb4006b53b11cbeaaff7e6fc37943 275 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 182 200 - T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG62_07515 7bcdb4006b53b11cbeaaff7e6fc37943 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 82 95 2.8E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG62_07515 7bcdb4006b53b11cbeaaff7e6fc37943 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 219 2.8E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG62_07515 7bcdb4006b53b11cbeaaff7e6fc37943 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 176 188 2.8E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG62_07515 7bcdb4006b53b11cbeaaff7e6fc37943 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 105 121 2.8E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 1.0E-8 T 23-10-2018 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 1.0E-8 T 23-10-2018 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 101 110 1.0E-8 T 23-10-2018 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 244 1.0E-8 T 23-10-2018 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 630 746 1.9E-15 T 23-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 Gene3D G3DSA:1.10.10.1100 421 475 2.5E-11 T 23-10-2018 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 558 620 5.0E-10 T 23-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 3 799 0.0 T 23-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 7.8E-15 T 23-10-2018 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 7.8E-15 T 23-10-2018 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 98 116 7.8E-15 T 23-10-2018 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 7.8E-15 T 23-10-2018 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 SUPERFAMILY SSF51905 145 304 5.98E-29 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 Gene3D G3DSA:3.50.50.60 5 278 2.0E-84 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 SUPERFAMILY SSF51905 2 186 1.13E-39 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 SUPERFAMILY SSF55124 500 639 6.38E-26 T 23-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 PIRSF PIRSF037149 1 836 0.0 T 23-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 Pfam PF04324 BFD-like [2Fe-2S] binding domain 421 469 4.4E-10 T 23-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 Gene3D G3DSA:3.30.413.10 628 798 1.1E-32 T 23-10-2018 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 677 693 - T 23-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 Gene3D G3DSA:3.50.50.60 106 241 2.0E-84 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 SUPERFAMILY SSF56014 631 805 1.3E-49 T 23-10-2018 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 280 1.8E-48 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 PRINTS PR00397 Sirohaem Fe-binding site signature 634 652 1.2E-6 T 23-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_08410 70f5ee10ec26a6d25bb6d140a3f9358d 848 PRINTS PR00397 Sirohaem Fe-binding site signature 677 695 1.2E-6 T 23-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_03690 bf8f8afe05b6bcbb00ec8fc8a9769057 368 Gene3D G3DSA:3.20.20.30 4 360 1.3E-106 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG62_03690 bf8f8afe05b6bcbb00ec8fc8a9769057 368 SUPERFAMILY SSF51679 5 358 1.44E-90 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG62_03690 bf8f8afe05b6bcbb00ec8fc8a9769057 368 Pfam PF00296 Luciferase-like monooxygenase 9 328 2.0E-72 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CDG62_03690 bf8f8afe05b6bcbb00ec8fc8a9769057 368 TIGRFAM TIGR04021 LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG 8 357 4.6E-182 T 23-10-2018 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG KEGG: 00920+1.14.14.35|MetaCyc: PWY-6059 CDG62_10910 d9f55ec715bfd5229ededc5e30135c4c 253 Gene3D G3DSA:3.40.50.720 1 252 1.5E-59 T 23-10-2018 CDG62_10910 d9f55ec715bfd5229ededc5e30135c4c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.9E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10910 d9f55ec715bfd5229ededc5e30135c4c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.9E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10910 d9f55ec715bfd5229ededc5e30135c4c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.9E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10910 d9f55ec715bfd5229ededc5e30135c4c 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 3.7E-49 T 23-10-2018 CDG62_10910 d9f55ec715bfd5229ededc5e30135c4c 253 SUPERFAMILY SSF51735 4 250 2.75E-62 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_10910 d9f55ec715bfd5229ededc5e30135c4c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 7.0E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10910 d9f55ec715bfd5229ededc5e30135c4c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 7.0E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10910 d9f55ec715bfd5229ededc5e30135c4c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 7.0E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10910 d9f55ec715bfd5229ededc5e30135c4c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 7.0E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10910 d9f55ec715bfd5229ededc5e30135c4c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.0E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10910 d9f55ec715bfd5229ededc5e30135c4c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 7.0E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_09965 3483a30210175e9afb9126fa6c6dd991 149 Gene3D G3DSA:3.40.630.30 4 149 6.6E-31 T 23-10-2018 CDG62_09965 3483a30210175e9afb9126fa6c6dd991 149 SUPERFAMILY SSF55729 5 137 1.65E-25 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_09965 3483a30210175e9afb9126fa6c6dd991 149 Pfam PF00583 Acetyltransferase (GNAT) family 48 137 4.8E-12 T 23-10-2018 IPR000182 GNAT domain CDG62_06585 589575e51bf4da4ddd1cd66c10558e19 485 SUPERFAMILY SSF56954 10 460 1.31E-105 T 23-10-2018 CDG62_06585 589575e51bf4da4ddd1cd66c10558e19 485 Gene3D G3DSA:1.20.1600.10 56 460 2.3E-132 T 23-10-2018 CDG62_06585 589575e51bf4da4ddd1cd66c10558e19 485 Gene3D G3DSA:2.20.200.10 102 349 2.3E-132 T 23-10-2018 CDG62_06585 589575e51bf4da4ddd1cd66c10558e19 485 Pfam PF02321 Outer membrane efflux protein 67 249 2.8E-27 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_06585 589575e51bf4da4ddd1cd66c10558e19 485 Pfam PF02321 Outer membrane efflux protein 278 458 2.0E-29 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_06585 589575e51bf4da4ddd1cd66c10558e19 485 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 460 3.9E-106 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CDG62_15595 ca6e53340169256e371a4b0dd4c349bc 401 Gene3D G3DSA:3.40.50.150 131 400 1.0E-100 T 23-10-2018 CDG62_15595 ca6e53340169256e371a4b0dd4c349bc 401 PIRSF PIRSF003085 10 400 1.0E-120 T 23-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CDG62_15595 ca6e53340169256e371a4b0dd4c349bc 401 Pfam PF02353 Mycolic acid cyclopropane synthetase 127 390 4.9E-84 T 23-10-2018 CDG62_15595 ca6e53340169256e371a4b0dd4c349bc 401 SUPERFAMILY SSF53335 17 352 5.63E-76 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_01450 3becca4c14fa4baf62ff5b681cef11bb 431 Gene3D G3DSA:3.30.450.90 59 178 1.3E-7 T 23-10-2018 CDG62_01450 3becca4c14fa4baf62ff5b681cef11bb 431 Pfam PF00437 Type II/IV secretion system protein 191 353 1.9E-24 T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG62_01450 3becca4c14fa4baf62ff5b681cef11bb 431 Gene3D G3DSA:3.40.50.300 180 429 1.3E-50 T 23-10-2018 CDG62_01450 3becca4c14fa4baf62ff5b681cef11bb 431 SUPERFAMILY SSF52540 68 379 1.42E-27 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_09875 f82bb6aa9dbc405eaeaaef12dfc8421a 486 Pfam PF01928 CYTH domain 1 181 3.2E-22 T 23-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CDG62_09875 f82bb6aa9dbc405eaeaaef12dfc8421a 486 SUPERFAMILY SSF55154 1 218 1.29E-39 T 23-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 CDG62_09875 f82bb6aa9dbc405eaeaaef12dfc8421a 486 Gene3D G3DSA:2.40.320.10 1 195 5.6E-35 T 23-10-2018 CDG62_09875 f82bb6aa9dbc405eaeaaef12dfc8421a 486 SMART SM01118 1 202 6.8E-31 T 23-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CDG62_05370 a614e2f8bfe437f715bff23ea06e6ca6 376 Gene3D G3DSA:3.20.20.105 1 368 2.5E-171 T 23-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDG62_05370 a614e2f8bfe437f715bff23ea06e6ca6 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 365 56.93 T 23-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDG62_05370 a614e2f8bfe437f715bff23ea06e6ca6 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 368 2.0E-164 T 23-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDG62_05370 a614e2f8bfe437f715bff23ea06e6ca6 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 369 1.7E-173 T 23-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDG62_05370 a614e2f8bfe437f715bff23ea06e6ca6 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 362 1.1E-92 T 23-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDG62_05370 a614e2f8bfe437f715bff23ea06e6ca6 376 SUPERFAMILY SSF51713 1 365 9.55E-163 T 23-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CDG62_18255 6899e00f00246500fc7510d71fd93936 112 SUPERFAMILY SSF54913 1 112 5.08E-46 T 23-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDG62_18255 6899e00f00246500fc7510d71fd93936 112 PRINTS PR00340 P-II protein signature 83 103 2.7E-44 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDG62_18255 6899e00f00246500fc7510d71fd93936 112 PRINTS PR00340 P-II protein signature 23 41 2.7E-44 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDG62_18255 6899e00f00246500fc7510d71fd93936 112 PRINTS PR00340 P-II protein signature 52 75 2.7E-44 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDG62_18255 6899e00f00246500fc7510d71fd93936 112 PRINTS PR00340 P-II protein signature 2 17 2.7E-44 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDG62_18255 6899e00f00246500fc7510d71fd93936 112 Gene3D G3DSA:3.30.70.120 1 112 1.1E-46 T 23-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDG62_18255 6899e00f00246500fc7510d71fd93936 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.8E-43 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDG62_18255 6899e00f00246500fc7510d71fd93936 112 SMART SM00938 4 105 1.6E-66 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDG62_18255 6899e00f00246500fc7510d71fd93936 112 PIRSF PIRSF039144 1 112 4.9E-55 T 23-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CDG62_18255 6899e00f00246500fc7510d71fd93936 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CDG62_18255 6899e00f00246500fc7510d71fd93936 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CDG62_16890 fe26cf836e579e6b76ff2cc110bbb871 208 Pfam PF01725 Ham1 family 12 203 5.8E-54 T 23-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 CDG62_16890 fe26cf836e579e6b76ff2cc110bbb871 208 Gene3D G3DSA:3.90.950.10 8 208 1.6E-70 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDG62_16890 fe26cf836e579e6b76ff2cc110bbb871 208 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 12 206 5.2E-55 T 23-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 CDG62_16890 fe26cf836e579e6b76ff2cc110bbb871 208 Hamap MF_01405 dITP/XTP pyrophosphatase. 10 208 48.555 T 23-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 CDG62_16890 fe26cf836e579e6b76ff2cc110bbb871 208 SUPERFAMILY SSF52972 7 206 1.54E-66 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDG62_17270 e4154fdf5cf057d274502f443a990b19 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 75 176 1.5E-9 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_17270 e4154fdf5cf057d274502f443a990b19 222 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 76 181 1.1E-12 T 23-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CDG62_17270 e4154fdf5cf057d274502f443a990b19 222 Gene3D G3DSA:3.40.50.1000 8 204 4.8E-49 T 23-10-2018 IPR023214 HAD superfamily CDG62_17270 e4154fdf5cf057d274502f443a990b19 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 1.1E-30 T 23-10-2018 CDG62_17270 e4154fdf5cf057d274502f443a990b19 222 Gene3D G3DSA:1.10.150.240 20 83 4.8E-49 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG62_17270 e4154fdf5cf057d274502f443a990b19 222 SUPERFAMILY SSF56784 3 214 5.29E-52 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_06455 b002ea598037861c5e32e3a1681b6dff 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 44 179 7.1E-68 T 23-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06455 b002ea598037861c5e32e3a1681b6dff 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 25 179 42.791 T 23-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06455 b002ea598037861c5e32e3a1681b6dff 225 SUPERFAMILY SSF56770 44 182 1.57E-63 T 23-10-2018 CDG62_06455 b002ea598037861c5e32e3a1681b6dff 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 146 162 - T 23-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06455 b002ea598037861c5e32e3a1681b6dff 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 88 172 3.2E-22 T 23-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06455 b002ea598037861c5e32e3a1681b6dff 225 Gene3D G3DSA:3.40.50.12280 19 190 7.8E-70 T 23-10-2018 CDG62_17755 a0e149086b297442918515e737abcb98 68 Pfam PF07869 Protein of unknown function (DUF1656) 3 57 1.5E-10 T 23-10-2018 IPR012451 Protein of unknown function DUF1656 CDG62_04550 73f3247ac788bdd6012fadcdb35842dd 200 Gene3D G3DSA:3.40.50.10990 2 175 2.2E-72 T 23-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG62_04550 73f3247ac788bdd6012fadcdb35842dd 200 Pfam PF00925 GTP cyclohydrolase II 7 171 3.1E-66 T 23-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG62_04550 73f3247ac788bdd6012fadcdb35842dd 200 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 6 194 7.1E-77 T 23-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG62_04550 73f3247ac788bdd6012fadcdb35842dd 200 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 197 43.412 T 23-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG62_04550 73f3247ac788bdd6012fadcdb35842dd 200 SUPERFAMILY SSF142695 3 174 5.75E-62 T 23-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 3.9E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 3.9E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 3.9E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 3.9E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 3.9E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 580 594 3.9E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 3.9E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 3.9E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 3.9E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 3.9E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 3.9E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 134 148 3.9E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 25 38 3.9E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 3.9E-92 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 Gene3D G3DSA:3.40.50.670 389 619 4.6E-88 T 23-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 620 4.0E-286 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 Pfam PF01751 Toprim domain 413 506 3.3E-12 T 23-10-2018 IPR006171 TOPRIM domain CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 SUPERFAMILY SSF54211 217 382 8.35E-45 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 SUPERFAMILY SSF55874 3 215 8.77E-62 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 1 624 46.04 T 23-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 SMART SM00387 26 173 1.8E-23 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 170 1.0E-19 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 SMART SM00433 33 620 4.7E-201 T 23-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 Gene3D G3DSA:3.30.230.10 216 388 2.3E-53 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 Pfam PF00204 DNA gyrase B 218 385 2.0E-40 T 23-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 9.3E-60 T 23-10-2018 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 9.3E-60 T 23-10-2018 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 9.3E-60 T 23-10-2018 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR00418 DNA topoisomerase II family signature 558 574 9.3E-60 T 23-10-2018 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 9.3E-60 T 23-10-2018 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR00418 DNA topoisomerase II family signature 30 45 9.3E-60 T 23-10-2018 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR00418 DNA topoisomerase II family signature 108 122 9.3E-60 T 23-10-2018 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR00418 DNA topoisomerase II family signature 65 78 9.3E-60 T 23-10-2018 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 9.3E-60 T 23-10-2018 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 SUPERFAMILY SSF56719 388 617 5.49E-74 T 23-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 Gene3D G3DSA:3.30.565.10 1 215 4.4E-73 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 23-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG62_03385 cd089a54e31bc8f85cbe320441ffdbf5 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 554 616 3.6E-22 T 23-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1073 13.504 T 23-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 Gene3D G3DSA:1.10.1030.10 404 553 1.4E-48 T 23-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 SUPERFAMILY SSF52440 557 675 1.19E-49 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 SMART SM00851 961 1047 5.7E-33 T 23-10-2018 IPR011607 Methylglyoxal synthase-like domain CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 SMART SM01096 424 547 4.4E-73 T 23-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 Gene3D G3DSA:3.30.470.20 119 403 1.6E-129 T 23-10-2018 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 3 1058 0.0 T 23-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 Gene3D G3DSA:3.40.50.20 1 116 1.2E-50 T 23-10-2018 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 2.6E-39 T 23-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 Gene3D G3DSA:3.30.470.20 665 935 1.6E-119 T 23-10-2018 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.156 T 23-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 SUPERFAMILY SSF52335 947 1073 2.49E-41 T 23-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 2.2E-35 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.3E-73 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 Pfam PF02142 MGS-like domain 962 1043 2.3E-20 T 23-10-2018 IPR011607 Methylglyoxal synthase-like domain CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 SUPERFAMILY SSF56059 673 933 2.65E-103 T 23-10-2018 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.2E-64 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.2E-64 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.2E-64 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.2E-64 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.2E-64 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.2E-64 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.2E-64 T 23-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 SUPERFAMILY SSF52440 2 127 9.78E-50 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 SUPERFAMILY SSF48108 397 554 2.62E-53 T 23-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 SUPERFAMILY SSF56059 128 401 3.54E-109 T 23-10-2018 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 Gene3D G3DSA:3.40.50.20 554 662 4.0E-49 T 23-10-2018 CDG62_07025 4b7cd564dea0c365fa72a8c386d75d3c 1077 Gene3D G3DSA:3.40.50.1380 943 1076 5.2E-37 T 23-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CDG62_17430 23a2b1e12eecdc3825fdbb2832ffe636 289 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 23-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG62_17430 23a2b1e12eecdc3825fdbb2832ffe636 289 Pfam PF01177 Asp/Glu/Hydantoin racemase 23 235 6.8E-29 T 23-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG62_17430 23a2b1e12eecdc3825fdbb2832ffe636 289 Hamap MF_00258 Glutamate racemase [murI]. 21 279 35.067 T 23-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG62_17430 23a2b1e12eecdc3825fdbb2832ffe636 289 SUPERFAMILY SSF53681 22 125 1.14E-34 T 23-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG62_17430 23a2b1e12eecdc3825fdbb2832ffe636 289 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 87 95 - T 23-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG62_17430 23a2b1e12eecdc3825fdbb2832ffe636 289 SUPERFAMILY SSF53681 127 268 2.62E-30 T 23-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG62_17430 23a2b1e12eecdc3825fdbb2832ffe636 289 TIGRFAM TIGR00067 glut_race: glutamate racemase 23 264 8.4E-66 T 23-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG62_17430 23a2b1e12eecdc3825fdbb2832ffe636 289 Gene3D G3DSA:3.40.50.1860 22 264 1.2E-77 T 23-10-2018 CDG62_17430 23a2b1e12eecdc3825fdbb2832ffe636 289 Gene3D G3DSA:3.40.50.1860 114 227 1.2E-77 T 23-10-2018 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 Pfam PF03979 Sigma-70 factor, region 1.1 8 83 1.6E-26 T 23-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 Gene3D G3DSA:1.10.220.120 5 66 8.0E-26 T 23-10-2018 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 Pfam PF04545 Sigma-70, region 4 561 614 5.4E-18 T 23-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 389 625 2.9E-122 T 23-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 Gene3D G3DSA:1.10.10.10 466 541 1.1E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 SUPERFAMILY SSF88659 466 539 1.4E-20 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 SUPERFAMILY SSF88659 523 625 4.3E-27 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 389 614 5.3E-38 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 SUPERFAMILY SSF88946 117 460 4.06E-95 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 626 43.823 T 23-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 Gene3D G3DSA:1.10.10.10 542 627 2.9E-36 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 417 430 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 Gene3D G3DSA:1.10.601.10 115 462 8.6E-129 T 23-10-2018 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 PRINTS PR00046 Major sigma-70 factor signature 601 612 5.0E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 PRINTS PR00046 Major sigma-70 factor signature 565 577 5.0E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 PRINTS PR00046 Major sigma-70 factor signature 441 449 5.0E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 PRINTS PR00046 Major sigma-70 factor signature 586 601 5.0E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 PRINTS PR00046 Major sigma-70 factor signature 417 430 5.0E-31 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 Pfam PF04546 Sigma-70, non-essential region 141 362 3.2E-53 T 23-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 Pfam PF04539 Sigma-70 region 3 472 548 4.4E-31 T 23-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 586 612 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 Pfam PF00140 Sigma-70 factor, region 1.2 100 130 2.2E-12 T 23-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG62_06700 c9be3540e04e8bf8a00a0d31bc874b8c 628 Pfam PF04542 Sigma-70 region 2 393 462 1.8E-21 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDG62_11060 d91111091726a9fae7b19b129ec2d698 153 Pfam PF00583 Acetyltransferase (GNAT) family 27 135 3.8E-15 T 23-10-2018 IPR000182 GNAT domain CDG62_11060 d91111091726a9fae7b19b129ec2d698 153 SUPERFAMILY SSF55729 1 138 1.44E-25 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_11060 d91111091726a9fae7b19b129ec2d698 153 Gene3D G3DSA:3.40.630.30 1 142 5.3E-24 T 23-10-2018 CDG62_09955 29e8799212e8feadda729aa3c4121fa4 662 SMART SM00861 357 527 5.0E-71 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDG62_09955 29e8799212e8feadda729aa3c4121fa4 662 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 23-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG62_09955 29e8799212e8feadda729aa3c4121fa4 662 ProSitePatterns PS00802 Transketolase signature 2. 469 485 - T 23-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG62_09955 29e8799212e8feadda729aa3c4121fa4 662 SUPERFAMILY SSF52518 7 322 2.39E-120 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG62_09955 29e8799212e8feadda729aa3c4121fa4 662 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 336 2.2E-162 T 23-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG62_09955 29e8799212e8feadda729aa3c4121fa4 662 Pfam PF02779 Transketolase, pyrimidine binding domain 356 526 2.6E-46 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDG62_09955 29e8799212e8feadda729aa3c4121fa4 662 SUPERFAMILY SSF52518 337 527 1.64E-67 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG62_09955 29e8799212e8feadda729aa3c4121fa4 662 Gene3D G3DSA:3.40.50.970 329 539 4.5E-83 T 23-10-2018 CDG62_09955 29e8799212e8feadda729aa3c4121fa4 662 Gene3D G3DSA:3.40.50.970 6 328 2.6E-130 T 23-10-2018 CDG62_09955 29e8799212e8feadda729aa3c4121fa4 662 SUPERFAMILY SSF52922 534 661 1.03E-37 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDG62_09955 29e8799212e8feadda729aa3c4121fa4 662 Pfam PF02780 Transketolase, C-terminal domain 551 653 6.4E-11 T 23-10-2018 IPR033248 Transketolase, C-terminal domain CDG62_09955 29e8799212e8feadda729aa3c4121fa4 662 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 661 8.5E-294 T 23-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CDG62_09955 29e8799212e8feadda729aa3c4121fa4 662 Gene3D G3DSA:3.40.50.920 540 661 5.1E-37 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDG62_04265 ea510e35dd556670f33ba39c97365dd6 64 Gene3D G3DSA:1.10.10.1100 1 56 1.5E-22 T 23-10-2018 CDG62_04265 ea510e35dd556670f33ba39c97365dd6 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 2.0E-14 T 23-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CDG62_16860 b61ed61337df558408aa7a7c60f20fc3 766 Gene3D G3DSA:2.40.170.20 176 766 3.5E-127 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_16860 b61ed61337df558408aa7a7c60f20fc3 766 SUPERFAMILY SSF56935 32 766 1.67E-119 T 23-10-2018 CDG62_16860 b61ed61337df558408aa7a7c60f20fc3 766 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 64 765 5.1E-83 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDG62_16860 b61ed61337df558408aa7a7c60f20fc3 766 Pfam PF00593 TonB dependent receptor 236 765 7.0E-50 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_16860 b61ed61337df558408aa7a7c60f20fc3 766 Gene3D G3DSA:2.170.130.10 44 172 6.6E-38 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_16860 b61ed61337df558408aa7a7c60f20fc3 766 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 160 1.2E-18 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_18180 43919087e1bf10f98433d078010ea114 522 SMART SM00387 413 519 4.4E-24 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_18180 43919087e1bf10f98433d078010ea114 522 Pfam PF00512 His Kinase A (phospho-acceptor) domain 312 373 1.1E-12 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_18180 43919087e1bf10f98433d078010ea114 522 SMART SM00388 312 375 8.0E-11 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_18180 43919087e1bf10f98433d078010ea114 522 Gene3D G3DSA:3.30.565.10 381 519 7.6E-27 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_18180 43919087e1bf10f98433d078010ea114 522 SUPERFAMILY SSF47384 306 372 3.14E-11 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG62_18180 43919087e1bf10f98433d078010ea114 522 Gene3D G3DSA:1.10.287.130 300 374 2.2E-14 T 23-10-2018 CDG62_18180 43919087e1bf10f98433d078010ea114 522 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 414 516 2.1E-15 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_18180 43919087e1bf10f98433d078010ea114 522 SUPERFAMILY SSF55874 383 516 3.93E-26 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_18180 43919087e1bf10f98433d078010ea114 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 465 1.1E-7 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_18180 43919087e1bf10f98433d078010ea114 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 516 1.1E-7 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_18180 43919087e1bf10f98433d078010ea114 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 479 1.1E-7 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_18180 43919087e1bf10f98433d078010ea114 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 1.1E-7 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_18180 43919087e1bf10f98433d078010ea114 522 Gene3D G3DSA:3.30.450.20 178 299 9.3E-6 T 23-10-2018 CDG62_14630 8564bf00d362cd5cbd7c6c6579144f4a 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 6.3E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_14630 8564bf00d362cd5cbd7c6c6579144f4a 182 SUPERFAMILY SSF48498 80 182 3.92E-14 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG62_14630 8564bf00d362cd5cbd7c6c6579144f4a 182 Gene3D G3DSA:1.10.357.10 2 182 6.3E-30 T 23-10-2018 CDG62_14630 8564bf00d362cd5cbd7c6c6579144f4a 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.7E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_14630 8564bf00d362cd5cbd7c6c6579144f4a 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 2.7E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_14630 8564bf00d362cd5cbd7c6c6579144f4a 182 SUPERFAMILY SSF46689 2 77 3.95E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_17570 95f1aeb9042ebe8e3d028e778643f71e 314 SUPERFAMILY SSF53335 82 311 3.56E-49 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_17570 95f1aeb9042ebe8e3d028e778643f71e 314 Gene3D G3DSA:3.40.50.150 94 314 1.0E-74 T 23-10-2018 CDG62_17570 95f1aeb9042ebe8e3d028e778643f71e 314 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 79 313 38.71 T 23-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CDG62_17570 95f1aeb9042ebe8e3d028e778643f71e 314 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 221 235 - T 23-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CDG62_17570 95f1aeb9042ebe8e3d028e778643f71e 314 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 99 114 - T 23-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CDG62_17570 95f1aeb9042ebe8e3d028e778643f71e 314 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 88 313 7.7E-83 T 23-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CDG62_17570 95f1aeb9042ebe8e3d028e778643f71e 314 Pfam PF01209 ubiE/COQ5 methyltransferase family 84 313 1.4E-99 T 23-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 66 9.3E-4 T 23-10-2018 IPR004176 Clp, N-terminal CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 92 142 1.4E-6 T 23-10-2018 IPR004176 Clp, N-terminal CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 720 5.7E-43 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 5.7E-43 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 5.7E-43 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 617 5.7E-43 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 SMART SM01086 764 853 1.1E-34 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 SUPERFAMILY SSF52540 157 543 4.16E-97 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 291 303 - T 23-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 764 843 3.2E-25 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 Gene3D G3DSA:1.10.8.60 764 858 8.7E-28 T 23-10-2018 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 Gene3D G3DSA:3.40.50.300 155 344 5.4E-74 T 23-10-2018 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 594 757 3.6E-56 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 Gene3D G3DSA:3.40.50.300 548 762 5.9E-88 T 23-10-2018 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 23-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 Gene3D G3DSA:3.40.50.300 345 542 3.2E-66 T 23-10-2018 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 SUPERFAMILY SSF81923 4 153 1.08E-33 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 200 316 1.2E-13 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 SMART SM00382 195 340 5.4E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 SMART SM00382 595 741 4.6E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 SUPERFAMILY SSF52540 544 850 1.65E-81 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 Gene3D G3DSA:1.10.1780.10 1 147 1.2E-24 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDG62_08045 790ef4fbc58130944a8f6f8645373880 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 629 647 - T 23-10-2018 IPR028299 ClpA/B, conserved site 2 CDG62_03530 01e888ba916ac8c44e98f7664e51196c 482 SUPERFAMILY SSF51984 22 109 3.79E-29 T 23-10-2018 CDG62_03530 01e888ba916ac8c44e98f7664e51196c 482 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 480 42.428 T 23-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_03530 01e888ba916ac8c44e98f7664e51196c 482 Pfam PF01225 Mur ligase family, catalytic domain 24 122 1.9E-28 T 23-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CDG62_03530 01e888ba916ac8c44e98f7664e51196c 482 SUPERFAMILY SSF53623 108 325 3.79E-73 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG62_03530 01e888ba916ac8c44e98f7664e51196c 482 Gene3D G3DSA:3.40.50.720 23 110 5.2E-32 T 23-10-2018 CDG62_03530 01e888ba916ac8c44e98f7664e51196c 482 Gene3D G3DSA:3.40.1190.10 111 323 3.1E-81 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG62_03530 01e888ba916ac8c44e98f7664e51196c 482 SUPERFAMILY SSF53244 326 474 3.48E-44 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG62_03530 01e888ba916ac8c44e98f7664e51196c 482 Pfam PF08245 Mur ligase middle domain 127 307 7.0E-29 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDG62_03530 01e888ba916ac8c44e98f7664e51196c 482 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 416 4.7E-20 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CDG62_03530 01e888ba916ac8c44e98f7664e51196c 482 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 24 473 1.9E-168 T 23-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_03530 01e888ba916ac8c44e98f7664e51196c 482 Gene3D G3DSA:3.90.190.20 324 480 3.1E-44 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG62_03295 b6b98f4c8c589c0ce5864ac42bf88ac9 159 Pfam PF02036 SCP-2 sterol transfer family 44 131 6.5E-5 T 23-10-2018 IPR003033 SCP2 sterol-binding domain CDG62_03295 b6b98f4c8c589c0ce5864ac42bf88ac9 159 Gene3D G3DSA:3.30.1050.10 26 137 1.4E-5 T 23-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 Gene3D G3DSA:3.40.120.10 257 336 2.0E-65 T 23-10-2018 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 SUPERFAMILY SSF53738 156 256 7.06E-32 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 Gene3D G3DSA:3.40.120.10 1 154 1.2E-45 T 23-10-2018 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 Gene3D G3DSA:3.40.120.10 175 359 2.0E-65 T 23-10-2018 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 370 439 9.4E-15 T 23-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 441 45.647 T 23-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 SUPERFAMILY SSF53738 2 181 1.33E-46 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 3.0E-40 T 23-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 Gene3D G3DSA:3.30.310.50 367 443 1.5E-21 T 23-10-2018 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 8.7E-20 T 23-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 SUPERFAMILY SSF53738 258 363 8.63E-28 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 362 1.2E-31 T 23-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 439 1.6E-182 T 23-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 6.0E-13 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 6.0E-13 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 6.0E-13 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 23-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_03600 aaa006ec0e03cea4dbe112cb18d4297c 443 SUPERFAMILY SSF55957 355 440 3.27E-21 T 23-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_18840 44a0c5959bf4cefe91e9d2e32f6399eb 612 Gene3D G3DSA:3.40.50.10490 450 597 7.6E-141 T 23-10-2018 CDG62_18840 44a0c5959bf4cefe91e9d2e32f6399eb 612 Pfam PF01380 SIS domain 466 594 1.4E-26 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CDG62_18840 44a0c5959bf4cefe91e9d2e32f6399eb 612 Pfam PF01380 SIS domain 288 420 2.8E-27 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CDG62_18840 44a0c5959bf4cefe91e9d2e32f6399eb 612 Gene3D G3DSA:3.40.50.10490 245 611 7.6E-141 T 23-10-2018 CDG62_18840 44a0c5959bf4cefe91e9d2e32f6399eb 612 SUPERFAMILY SSF53697 244 612 5.94E-107 T 23-10-2018 CDG62_18840 44a0c5959bf4cefe91e9d2e32f6399eb 612 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 612 5.2E-252 T 23-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CDG62_18840 44a0c5959bf4cefe91e9d2e32f6399eb 612 Pfam PF13522 Glutamine amidotransferase domain 66 181 5.5E-21 T 23-10-2018 CDG62_18840 44a0c5959bf4cefe91e9d2e32f6399eb 612 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 612 40.261 T 23-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CDG62_18840 44a0c5959bf4cefe91e9d2e32f6399eb 612 Gene3D G3DSA:3.60.20.10 2 238 3.4E-77 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG62_18840 44a0c5959bf4cefe91e9d2e32f6399eb 612 SUPERFAMILY SSF56235 2 222 1.03E-71 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG62_08400 f7e6a59a14f9a1028da3de9021e39c9e 195 Gene3D G3DSA:1.10.10.10 131 190 2.4E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_08400 f7e6a59a14f9a1028da3de9021e39c9e 195 SMART SM01012 128 183 1.2E-20 T 23-10-2018 IPR005561 ANTAR domain GO:0003723 CDG62_08400 f7e6a59a14f9a1028da3de9021e39c9e 195 SUPERFAMILY SSF52172 1 183 1.57E-40 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_08400 f7e6a59a14f9a1028da3de9021e39c9e 195 Gene3D G3DSA:3.40.50.2300 1 129 1.1E-12 T 23-10-2018 CDG62_08400 f7e6a59a14f9a1028da3de9021e39c9e 195 PIRSF PIRSF036382 1 190 1.1E-49 T 23-10-2018 IPR008327 Signal transduction response regulator, antiterminator CDG62_08400 f7e6a59a14f9a1028da3de9021e39c9e 195 Pfam PF00072 Response regulator receiver domain 6 112 2.5E-7 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_08400 f7e6a59a14f9a1028da3de9021e39c9e 195 Pfam PF03861 ANTAR domain 131 183 6.2E-17 T 23-10-2018 IPR005561 ANTAR domain GO:0003723 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 Gene3D G3DSA:3.40.1110.10 313 439 7.7E-39 T 23-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 SUPERFAMILY SSF81665 28 650 9.15E-10 T 23-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 SUPERFAMILY SSF56784 286 550 2.78E-39 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 300 306 - T 23-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 Pfam PF00122 E1-E2 ATPase 112 277 1.7E-32 T 23-10-2018 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 11 666 2.0E-280 T 23-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 670 38.002 T 23-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 Gene3D G3DSA:2.70.150.20 98 205 8.6E-24 T 23-10-2018 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 360 592 1.1E-45 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 67 333 1.0E-30 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 298 312 5.7E-23 T 23-10-2018 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 541 5.7E-23 T 23-10-2018 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 453 463 5.7E-23 T 23-10-2018 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 506 525 5.7E-23 T 23-10-2018 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 147 161 5.7E-23 T 23-10-2018 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 SUPERFAMILY SSF81653 112 200 2.88E-18 T 23-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CDG62_15470 e4acdc3aecdf94d6b1516901916e67df 670 Pfam PF00702 haloacid dehalogenase-like hydrolase 294 520 9.8E-35 T 23-10-2018 CDG62_16865 b67083606895045dc6d59d45807a00de 230 Gene3D G3DSA:4.10.860.20 183 230 5.1E-21 T 23-10-2018 CDG62_16865 b67083606895045dc6d59d45807a00de 230 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 4 230 45.827 T 23-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 CDG62_16865 b67083606895045dc6d59d45807a00de 230 Gene3D G3DSA:2.60.120.620 3 181 1.3E-44 T 23-10-2018 CDG62_16865 b67083606895045dc6d59d45807a00de 230 SMART SM00702 3 180 5.9E-23 T 23-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 CDG62_16865 b67083606895045dc6d59d45807a00de 230 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 87 179 1.4E-12 T 23-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CDG62_16865 b67083606895045dc6d59d45807a00de 230 SUPERFAMILY SSF51197 7 188 1.88E-6 T 23-10-2018 CDG62_18110 5eb2c94d9df9cf7dc61d97933dd9de44 175 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 52 174 29.053 T 23-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CDG62_18110 5eb2c94d9df9cf7dc61d97933dd9de44 175 PRINTS PR00618 DksA/TraR zinc finger signature 150 162 8.5E-5 T 23-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CDG62_18110 5eb2c94d9df9cf7dc61d97933dd9de44 175 PRINTS PR00618 DksA/TraR zinc finger signature 138 149 8.5E-5 T 23-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CDG62_18110 5eb2c94d9df9cf7dc61d97933dd9de44 175 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 138 162 - T 23-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CDG62_18110 5eb2c94d9df9cf7dc61d97933dd9de44 175 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 56 164 7.6E-51 T 23-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CDG62_18110 5eb2c94d9df9cf7dc61d97933dd9de44 175 Gene3D G3DSA:1.20.120.910 45 174 2.0E-36 T 23-10-2018 CDG62_18110 5eb2c94d9df9cf7dc61d97933dd9de44 175 SUPERFAMILY SSF57716 135 172 3.28E-10 T 23-10-2018 CDG62_18110 5eb2c94d9df9cf7dc61d97933dd9de44 175 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 134 167 1.1E-11 T 23-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CDG62_18110 5eb2c94d9df9cf7dc61d97933dd9de44 175 SUPERFAMILY SSF109635 40 134 7.06E-35 T 23-10-2018 IPR037187 DksA, N-terminal domain superfamily CDG62_03880 fffd2ef0ef4602e643c537c1f1851013 1061 SUPERFAMILY SSF52540 130 446 4.74E-31 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_03880 fffd2ef0ef4602e643c537c1f1851013 1061 SMART SM00490 356 436 5.4E-5 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_03880 fffd2ef0ef4602e643c537c1f1851013 1061 Pfam PF00271 Helicase conserved C-terminal domain 337 435 1.7E-7 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_03880 fffd2ef0ef4602e643c537c1f1851013 1061 Pfam PF04851 Type III restriction enzyme, res subunit 109 278 1.4E-20 T 23-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDG62_03880 fffd2ef0ef4602e643c537c1f1851013 1061 SMART SM00487 107 297 2.0E-14 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG62_03880 fffd2ef0ef4602e643c537c1f1851013 1061 Gene3D G3DSA:3.40.50.300 307 477 1.5E-17 T 23-10-2018 CDG62_03880 fffd2ef0ef4602e643c537c1f1851013 1061 Gene3D G3DSA:3.40.50.300 102 292 1.1E-26 T 23-10-2018 CDG62_01650 3b87343b391f11c7ed566356af521708 197 Gene3D G3DSA:1.10.150.130 6 92 8.6E-30 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG62_01650 3b87343b391f11c7ed566356af521708 197 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 9 90 2.1E-23 T 23-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDG62_01650 3b87343b391f11c7ed566356af521708 197 Pfam PF00589 Phage integrase family 110 158 2.2E-7 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG62_01650 3b87343b391f11c7ed566356af521708 197 Gene3D G3DSA:1.10.443.10 99 186 8.2E-11 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG62_01650 3b87343b391f11c7ed566356af521708 197 SUPERFAMILY SSF56349 9 167 1.04E-15 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG62_14810 93471ca45fbfa74317a1eb3d4b67e5f8 191 SUPERFAMILY SSF54593 2 140 3.76E-37 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_14810 93471ca45fbfa74317a1eb3d4b67e5f8 191 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 116 135 - T 23-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 CDG62_14810 93471ca45fbfa74317a1eb3d4b67e5f8 191 Gene3D G3DSA:3.10.180.10 1 175 3.2E-35 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_14810 93471ca45fbfa74317a1eb3d4b67e5f8 191 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 136 3.7E-17 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDG62_03030 cdb2ea3319d5c88246d79b92b9112fa0 881 Pfam PF01345 Domain of unknown function DUF11 194 308 4.4E-11 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_03030 cdb2ea3319d5c88246d79b92b9112fa0 881 Gene3D G3DSA:2.60.40.740 193 330 2.9E-8 T 23-10-2018 CDG62_03030 cdb2ea3319d5c88246d79b92b9112fa0 881 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 804 840 1.7E-5 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_03030 cdb2ea3319d5c88246d79b92b9112fa0 881 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 197 245 4.1E-9 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_09650 f15af7ece5f94fe19a9cb50dc2054cde 151 Pfam PF07030 Protein of unknown function (DUF1320) 2 112 3.8E-30 T 23-10-2018 IPR009752 Bacteriophage Mu, Gp36 CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 SMART SM00304 262 314 7.0E-9 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 SUPERFAMILY SSF158472 266 313 1.44E-6 T 23-10-2018 CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 Gene3D G3DSA:3.30.565.10 386 546 3.4E-32 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 SMART SM00388 315 380 1.6E-13 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 Gene3D G3DSA:1.10.287.130 266 381 5.9E-24 T 23-10-2018 CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 SUPERFAMILY SSF55874 369 536 7.99E-35 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 Pfam PF00512 His Kinase A (phospho-acceptor) domain 316 380 4.6E-10 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 533 3.1E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 474 3.1E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 513 3.1E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 488 3.1E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 SUPERFAMILY SSF47384 298 380 2.35E-16 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 Pfam PF00672 HAMP domain 266 311 2.3E-6 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 SMART SM00387 424 536 1.0E-31 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_06440 c302684cdb3a034590910c497ace1c8a 554 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 427 534 1.4E-20 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_13040 8c54b675c4bd2debfe52be0eb6134256 496 Pfam PF06742 Protein of unknown function (DUF1214) 369 480 1.1E-32 T 23-10-2018 IPR010621 Domain of unknown function DUF1214 CDG62_13040 8c54b675c4bd2debfe52be0eb6134256 496 Gene3D G3DSA:2.60.120.600 348 496 3.1E-39 T 23-10-2018 IPR037049 Domain of unknown function DUF1214, C-terminal domain superfamily CDG62_13040 8c54b675c4bd2debfe52be0eb6134256 496 SUPERFAMILY SSF160935 60 495 9.55E-105 T 23-10-2018 CDG62_13040 8c54b675c4bd2debfe52be0eb6134256 496 Gene3D G3DSA:1.10.3360.10 102 319 5.8E-23 T 23-10-2018 IPR023289 VPA0735-like domain superfamily CDG62_13040 8c54b675c4bd2debfe52be0eb6134256 496 Pfam PF06863 Protein of unknown function (DUF1254) 103 234 5.3E-34 T 23-10-2018 IPR010679 Domain of unknown function DUF1254 CDG62_13040 8c54b675c4bd2debfe52be0eb6134256 496 Gene3D G3DSA:2.60.40.1610 103 253 5.8E-23 T 23-10-2018 IPR037050 Domain of unknown function DUF1254 superfamily CDG62_18485 c5132678c51f70cbf72be352d5b47b8f 464 Gene3D G3DSA:1.10.1140.10 349 464 1.0E-57 T 23-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_18485 c5132678c51f70cbf72be352d5b47b8f 464 Gene3D G3DSA:3.40.50.300 74 348 3.1E-112 T 23-10-2018 CDG62_18485 c5132678c51f70cbf72be352d5b47b8f 464 SMART SM00382 140 331 3.2E-4 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_18485 c5132678c51f70cbf72be352d5b47b8f 464 SUPERFAMILY SSF52540 75 352 1.77E-90 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_18485 c5132678c51f70cbf72be352d5b47b8f 464 SUPERFAMILY SSF47917 349 463 6.54E-53 T 23-10-2018 CDG62_18485 c5132678c51f70cbf72be352d5b47b8f 464 Gene3D G3DSA:2.40.10.170 1 73 1.8E-30 T 23-10-2018 CDG62_18485 c5132678c51f70cbf72be352d5b47b8f 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 23-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_18485 c5132678c51f70cbf72be352d5b47b8f 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 3.4E-20 T 23-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_18485 c5132678c51f70cbf72be352d5b47b8f 464 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 2.8E-253 T 23-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CDG62_18485 c5132678c51f70cbf72be352d5b47b8f 464 SUPERFAMILY SSF50615 2 73 1.12E-25 T 23-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_18485 c5132678c51f70cbf72be352d5b47b8f 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.5E-62 T 23-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_18485 c5132678c51f70cbf72be352d5b47b8f 464 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.834 T 23-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CDG62_15500 6091a3f20df1ea486c44474748767596 417 Pfam PF13641 Glycosyltransferase like family 2 51 278 5.9E-35 T 23-10-2018 CDG62_15500 6091a3f20df1ea486c44474748767596 417 SUPERFAMILY SSF53448 42 304 1.69E-56 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_15500 6091a3f20df1ea486c44474748767596 417 Gene3D G3DSA:3.90.550.10 45 266 5.6E-45 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_01335 2e7fa246f1e2ff49058d50ff4a26c493 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 92 4.9E-10 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDG62_01335 2e7fa246f1e2ff49058d50ff4a26c493 112 PRINTS PR00355 Adrenodoxin signature 42 52 5.8E-8 T 23-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDG62_01335 2e7fa246f1e2ff49058d50ff4a26c493 112 PRINTS PR00355 Adrenodoxin signature 60 74 5.8E-8 T 23-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDG62_01335 2e7fa246f1e2ff49058d50ff4a26c493 112 PRINTS PR00355 Adrenodoxin signature 83 91 5.8E-8 T 23-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDG62_01335 2e7fa246f1e2ff49058d50ff4a26c493 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 23-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDG62_01335 2e7fa246f1e2ff49058d50ff4a26c493 112 SUPERFAMILY SSF54292 4 106 2.29E-26 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG62_01335 2e7fa246f1e2ff49058d50ff4a26c493 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.1E-48 T 23-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 CDG62_01335 2e7fa246f1e2ff49058d50ff4a26c493 112 Gene3D G3DSA:3.10.20.30 1 112 7.6E-33 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 44 59 1.8E-36 T 23-10-2018 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 12 34 1.8E-36 T 23-10-2018 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 1.8E-36 T 23-10-2018 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 1.8E-36 T 23-10-2018 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 1.8E-36 T 23-10-2018 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.8E-36 T 23-10-2018 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.8E-36 T 23-10-2018 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.8E-36 T 23-10-2018 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 1.8E-36 T 23-10-2018 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 Gene3D G3DSA:1.10.287.990 42 110 2.2E-76 T 23-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 SUPERFAMILY SSF51905 9 210 3.48E-31 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 SUPERFAMILY SSF55424 351 463 7.9E-25 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 326 2.1E-34 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 Gene3D G3DSA:3.50.50.60 12 330 2.2E-76 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 Gene3D G3DSA:3.50.50.60 149 270 2.2E-76 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 SUPERFAMILY SSF51905 175 338 1.39E-17 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 457 3.0E-17 T 23-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 PIRSF PIRSF000350 2 466 7.2E-59 T 23-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 3.1E-13 T 23-10-2018 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 3.1E-13 T 23-10-2018 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 3.1E-13 T 23-10-2018 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 3.1E-13 T 23-10-2018 CDG62_05080 254734f09238ebdb3869640dd1796f7f 467 Gene3D G3DSA:3.30.390.30 348 466 6.3E-38 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG62_04500 741c64b67daa7873eb58f7235b0c97f2 434 Pfam PF06863 Protein of unknown function (DUF1254) 57 186 2.5E-27 T 23-10-2018 IPR010679 Domain of unknown function DUF1254 CDG62_04500 741c64b67daa7873eb58f7235b0c97f2 434 SUPERFAMILY SSF160935 23 432 2.09E-99 T 23-10-2018 CDG62_04500 741c64b67daa7873eb58f7235b0c97f2 434 Gene3D G3DSA:2.60.40.1610 56 200 1.7E-10 T 23-10-2018 IPR037050 Domain of unknown function DUF1254 superfamily CDG62_04500 741c64b67daa7873eb58f7235b0c97f2 434 Gene3D G3DSA:2.60.120.1600 313 434 6.9E-36 T 23-10-2018 CDG62_04500 741c64b67daa7873eb58f7235b0c97f2 434 Gene3D G3DSA:1.10.3360.10 30 243 1.7E-10 T 23-10-2018 IPR023289 VPA0735-like domain superfamily CDG62_04500 741c64b67daa7873eb58f7235b0c97f2 434 Pfam PF06742 Protein of unknown function (DUF1214) 311 417 1.0E-22 T 23-10-2018 IPR010621 Domain of unknown function DUF1214 CDG62_10565 50be82403bbe85ca001d1e4e9cd351c4 1251 Pfam PF01619 Proline dehydrogenase 207 508 3.4E-99 T 23-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 CDG62_10565 50be82403bbe85ca001d1e4e9cd351c4 1251 PIRSF PIRSF000197 12 1251 0.0 T 23-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CDG62_10565 50be82403bbe85ca001d1e4e9cd351c4 1251 Gene3D G3DSA:3.20.20.220 158 549 1.3E-146 T 23-10-2018 CDG62_10565 50be82403bbe85ca001d1e4e9cd351c4 1251 Gene3D G3DSA:3.20.20.220 26 124 1.4E-11 T 23-10-2018 CDG62_10565 50be82403bbe85ca001d1e4e9cd351c4 1251 Pfam PF00171 Aldehyde dehydrogenase family 602 1050 3.5E-117 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG62_10565 50be82403bbe85ca001d1e4e9cd351c4 1251 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 86 197 9.3E-44 T 23-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CDG62_10565 50be82403bbe85ca001d1e4e9cd351c4 1251 SUPERFAMILY SSF53720 594 1051 1.83E-126 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG62_10565 50be82403bbe85ca001d1e4e9cd351c4 1251 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 549 1051 2.0E-223 T 23-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CDG62_10565 50be82403bbe85ca001d1e4e9cd351c4 1251 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 851 862 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDG62_10565 50be82403bbe85ca001d1e4e9cd351c4 1251 Gene3D G3DSA:3.40.605.10 577 1051 7.3E-145 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG62_10565 50be82403bbe85ca001d1e4e9cd351c4 1251 SUPERFAMILY SSF51730 200 556 5.89E-117 T 23-10-2018 IPR029041 FAD-linked oxidoreductase-like CDG62_10565 50be82403bbe85ca001d1e4e9cd351c4 1251 Gene3D G3DSA:3.40.309.10 826 1022 7.3E-145 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG62_10565 50be82403bbe85ca001d1e4e9cd351c4 1251 SUPERFAMILY SSF81935 27 199 4.58E-62 T 23-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CDG62_11900 12a3344337fbf865ecb758ee7015adc0 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.4E-33 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_11900 12a3344337fbf865ecb758ee7015adc0 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.4E-33 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_11900 12a3344337fbf865ecb758ee7015adc0 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-33 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_11900 12a3344337fbf865ecb758ee7015adc0 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-33 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_11900 12a3344337fbf865ecb758ee7015adc0 363 Gene3D G3DSA:3.10.20.30 48 361 2.6E-151 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG62_11900 12a3344337fbf865ecb758ee7015adc0 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 6.1E-40 T 23-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 CDG62_11900 12a3344337fbf865ecb758ee7015adc0 363 Gene3D G3DSA:1.10.150.300 113 200 2.6E-151 T 23-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 CDG62_11900 12a3344337fbf865ecb758ee7015adc0 363 Pfam PF01926 50S ribosome-binding GTPase 5 128 9.0E-23 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_11900 12a3344337fbf865ecb758ee7015adc0 363 PIRSF PIRSF006641 1 363 9.5E-155 T 23-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CDG62_11900 12a3344337fbf865ecb758ee7015adc0 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 7.8E-159 T 23-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CDG62_11900 12a3344337fbf865ecb758ee7015adc0 363 Gene3D G3DSA:3.40.50.300 4 278 2.6E-151 T 23-10-2018 CDG62_11900 12a3344337fbf865ecb758ee7015adc0 363 SUPERFAMILY SSF81271 279 360 7.19E-37 T 23-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CDG62_11900 12a3344337fbf865ecb758ee7015adc0 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.637 T 23-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CDG62_11900 12a3344337fbf865ecb758ee7015adc0 363 SUPERFAMILY SSF52540 3 301 2.68E-82 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_16030 72ee3a3a6cbfc97b6259e94ea4dff8fd 161 Gene3D G3DSA:1.10.10.10 77 161 2.1E-34 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_16030 72ee3a3a6cbfc97b6259e94ea4dff8fd 161 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 159 6.6E-31 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CDG62_16030 72ee3a3a6cbfc97b6259e94ea4dff8fd 161 SUPERFAMILY SSF46767 77 159 1.1E-30 T 23-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 CDG62_16030 72ee3a3a6cbfc97b6259e94ea4dff8fd 161 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 157 7.1E-34 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CDG62_16030 72ee3a3a6cbfc97b6259e94ea4dff8fd 161 SUPERFAMILY SSF53155 4 83 3.73E-18 T 23-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CDG62_16030 72ee3a3a6cbfc97b6259e94ea4dff8fd 161 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 75 1.2E-8 T 23-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CDG62_16030 72ee3a3a6cbfc97b6259e94ea4dff8fd 161 Gene3D G3DSA:3.30.160.70 3 74 4.8E-17 T 23-10-2018 CDG62_16030 72ee3a3a6cbfc97b6259e94ea4dff8fd 161 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 158 41.927 T 23-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CDG62_08470 d1410e25ca93d164d1d9d9b78fe26e6e 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 196 2.4E-37 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG62_08470 d1410e25ca93d164d1d9d9b78fe26e6e 200 Gene3D G3DSA:3.40.50.1240 1 199 8.3E-39 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG62_08470 d1410e25ca93d164d1d9d9b78fe26e6e 200 SMART SM00855 3 160 2.3E-9 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG62_08470 d1410e25ca93d164d1d9d9b78fe26e6e 200 SUPERFAMILY SSF53254 1 192 4.71E-40 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG62_08470 d1410e25ca93d164d1d9d9b78fe26e6e 200 PIRSF PIRSF000709 3 190 7.0E-4 T 23-10-2018 CDG62_14780 a41fd11856d40bd7a189c2a746ce678d 353 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 153 268 3.4E-19 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDG62_14780 a41fd11856d40bd7a189c2a746ce678d 353 Gene3D G3DSA:3.10.180.10 148 349 1.4E-69 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_14780 a41fd11856d40bd7a189c2a746ce678d 353 Gene3D G3DSA:3.10.180.10 2 147 2.1E-41 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_14780 a41fd11856d40bd7a189c2a746ce678d 353 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 348 6.3E-115 T 23-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 CDG62_14780 a41fd11856d40bd7a189c2a746ce678d 353 PIRSF PIRSF009283 1 349 3.6E-107 T 23-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 CDG62_14780 a41fd11856d40bd7a189c2a746ce678d 353 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 128 4.0E-49 T 23-10-2018 CDG62_14780 a41fd11856d40bd7a189c2a746ce678d 353 SUPERFAMILY SSF54593 5 335 3.15E-76 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_03510 7af87e67af103436b02599ea4aa5b6ad 147 SUPERFAMILY SSF46785 2 142 7.49E-29 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_03510 7af87e67af103436b02599ea4aa5b6ad 147 SMART SM00347 28 126 4.4E-15 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG62_03510 7af87e67af103436b02599ea4aa5b6ad 147 Gene3D G3DSA:1.10.10.10 2 142 2.1E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_03510 7af87e67af103436b02599ea4aa5b6ad 147 Pfam PF01047 MarR family 35 91 1.6E-13 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG62_06710 aba254fa2c107a900bff01bf3f347e92 174 Gene3D G3DSA:1.20.120.740 7 153 1.0E-6 T 23-10-2018 CDG62_06710 aba254fa2c107a900bff01bf3f347e92 174 SUPERFAMILY SSF101327 4 172 9.94E-24 T 23-10-2018 IPR036255 YgfB-like superfamily CDG62_06710 aba254fa2c107a900bff01bf3f347e92 174 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 6 169 1.1E-22 T 23-10-2018 IPR011978 Uncharacterised protein family UPF0149 CDG62_06710 aba254fa2c107a900bff01bf3f347e92 174 Pfam PF03695 Uncharacterised protein family (UPF0149) 10 170 2.6E-20 T 23-10-2018 IPR011978 Uncharacterised protein family UPF0149 CDG62_13345 c3fa9905703bfc56d197ba91a8ae02a1 374 Gene3D G3DSA:2.40.110.10 118 231 5.3E-42 T 23-10-2018 CDG62_13345 c3fa9905703bfc56d197ba91a8ae02a1 374 Gene3D G3DSA:1.20.140.10 232 374 2.7E-56 T 23-10-2018 CDG62_13345 c3fa9905703bfc56d197ba91a8ae02a1 374 Gene3D G3DSA:1.10.540.10 1 117 3.6E-41 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG62_13345 c3fa9905703bfc56d197ba91a8ae02a1 374 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 333 352 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG62_13345 c3fa9905703bfc56d197ba91a8ae02a1 374 PIRSF PIRSF016578 235 370 1.9E-12 T 23-10-2018 CDG62_13345 c3fa9905703bfc56d197ba91a8ae02a1 374 PIRSF PIRSF016578 4 192 3.4E-10 T 23-10-2018 CDG62_13345 c3fa9905703bfc56d197ba91a8ae02a1 374 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 115 1.1E-34 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG62_13345 c3fa9905703bfc56d197ba91a8ae02a1 374 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 374 1.4E-50 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG62_13345 c3fa9905703bfc56d197ba91a8ae02a1 374 SUPERFAMILY SSF56645 4 239 3.53E-82 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_13345 c3fa9905703bfc56d197ba91a8ae02a1 374 SUPERFAMILY SSF47203 224 374 6.44E-58 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_13345 c3fa9905703bfc56d197ba91a8ae02a1 374 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 119 214 1.5E-25 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 SUPERFAMILY SSF52402 248 358 2.93E-8 T 23-10-2018 CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 229 4.2E-90 T 23-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 SMART SM00387 769 881 4.5E-30 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 SUPERFAMILY SSF52540 26 144 2.62E-6 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 Pfam PF00512 His Kinase A (phospho-acceptor) domain 658 724 1.3E-13 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 Gene3D G3DSA:3.40.50.620 230 363 9.1E-7 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 SUPERFAMILY SSF47384 652 725 2.35E-15 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 Gene3D G3DSA:1.10.287.130 650 724 1.2E-17 T 23-10-2018 CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 SUPERFAMILY SSF55874 715 879 3.14E-36 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 SMART SM00388 657 725 1.9E-16 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 Gene3D G3DSA:3.30.565.10 736 882 1.2E-35 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 Gene3D G3DSA:3.40.50.300 18 228 2.6E-93 T 23-10-2018 CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 Gene3D G3DSA:3.30.450.40 513 649 4.5E-16 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 865 878 1.4E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 840 858 1.4E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 806 820 1.4E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 824 834 1.4E-13 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 Gene3D G3DSA:1.20.120.620 398 502 1.5E-15 T 23-10-2018 IPR038318 KdpD, transmembrane domain superfamily CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 Pfam PF13493 Domain of unknown function (DUF4118) 405 503 7.9E-18 T 23-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain CDG62_15460 9d414ad615e136cd709cbcb4155950fd 882 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 774 880 1.3E-20 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_02230 e817ef4bc23f341cf13e018c1d424095 146 Pfam PF01641 SelR domain 28 145 3.1E-47 T 23-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CDG62_02230 e817ef4bc23f341cf13e018c1d424095 146 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 24 146 4.0E-51 T 23-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CDG62_02230 e817ef4bc23f341cf13e018c1d424095 146 SUPERFAMILY SSF51316 22 145 6.8E-52 T 23-10-2018 IPR011057 Mss4-like superfamily CDG62_02230 e817ef4bc23f341cf13e018c1d424095 146 Gene3D G3DSA:2.170.150.20 8 146 9.0E-55 T 23-10-2018 CDG62_12825 7a3e23d158ad875c881fbe8b45a4108d 241 Gene3D G3DSA:3.20.20.70 1 241 1.2E-105 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_12825 7a3e23d158ad875c881fbe8b45a4108d 241 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 5 238 8.4E-98 T 23-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CDG62_12825 7a3e23d158ad875c881fbe8b45a4108d 241 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 5 237 7.7E-103 T 23-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CDG62_12825 7a3e23d158ad875c881fbe8b45a4108d 241 SUPERFAMILY SSF63892 3 239 4.45E-99 T 23-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CDG62_12825 7a3e23d158ad875c881fbe8b45a4108d 241 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 241 129.143 T 23-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CDG62_19220 cc6e7c74487eb3bc08bd6f47fcd736fc 326 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 21 313 6.2E-63 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG62_19220 cc6e7c74487eb3bc08bd6f47fcd736fc 326 Gene3D G3DSA:1.20.1510.10 19 241 2.0E-29 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG62_19220 cc6e7c74487eb3bc08bd6f47fcd736fc 326 SUPERFAMILY SSF161111 18 242 8.5E-46 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG62_19220 cc6e7c74487eb3bc08bd6f47fcd736fc 326 Pfam PF01545 Cation efflux family 25 241 2.2E-36 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG62_04520 41dc26b1305f6b9c81488506d5782818 607 Gene3D G3DSA:2.40.110.10 161 287 3.9E-29 T 23-10-2018 CDG62_04520 41dc26b1305f6b9c81488506d5782818 607 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 472 598 3.6E-30 T 23-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDG62_04520 41dc26b1305f6b9c81488506d5782818 607 Gene3D G3DSA:1.10.540.10 33 159 6.4E-19 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG62_04520 41dc26b1305f6b9c81488506d5782818 607 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 157 7.9E-15 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG62_04520 41dc26b1305f6b9c81488506d5782818 607 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 1.2E-16 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG62_04520 41dc26b1305f6b9c81488506d5782818 607 SUPERFAMILY SSF56645 37 292 1.44E-59 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_04520 41dc26b1305f6b9c81488506d5782818 607 Gene3D G3DSA:1.20.140.10 288 464 3.3E-40 T 23-10-2018 CDG62_04520 41dc26b1305f6b9c81488506d5782818 607 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 28 2.2E-7 T 23-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CDG62_04520 41dc26b1305f6b9c81488506d5782818 607 SUPERFAMILY SSF47203 287 478 3.22E-44 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_04520 41dc26b1305f6b9c81488506d5782818 607 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 457 2.6E-20 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG62_14850 9692a6e74ed66ce8339e19bb4ed64a70 572 Gene3D G3DSA:3.50.50.60 6 166 8.3E-29 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14850 9692a6e74ed66ce8339e19bb4ed64a70 572 Pfam PF00732 GMC oxidoreductase 8 283 8.4E-12 T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CDG62_14850 9692a6e74ed66ce8339e19bb4ed64a70 572 SUPERFAMILY SSF51905 5 532 3.11E-42 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14850 9692a6e74ed66ce8339e19bb4ed64a70 572 Gene3D G3DSA:3.50.50.60 167 330 7.8E-30 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14850 9692a6e74ed66ce8339e19bb4ed64a70 572 Gene3D G3DSA:3.50.50.60 452 535 8.2E-20 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14850 9692a6e74ed66ce8339e19bb4ed64a70 572 Pfam PF05199 GMC oxidoreductase 468 526 2.8E-17 T 23-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CDG62_03515 7a9bcbd9d0b55f474cd05ddd289ee56c 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 23-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CDG62_03515 7a9bcbd9d0b55f474cd05ddd289ee56c 160 Pfam PF00255 Glutathione peroxidase 4 110 2.5E-41 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_03515 7a9bcbd9d0b55f474cd05ddd289ee56c 160 SUPERFAMILY SSF52833 3 159 1.27E-61 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_03515 7a9bcbd9d0b55f474cd05ddd289ee56c 160 Gene3D G3DSA:3.40.30.10 1 160 9.7E-71 T 23-10-2018 CDG62_03515 7a9bcbd9d0b55f474cd05ddd289ee56c 160 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 23-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 CDG62_03515 7a9bcbd9d0b55f474cd05ddd289ee56c 160 PRINTS PR01011 Glutathione peroxidase family signature 123 132 8.8E-20 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_03515 7a9bcbd9d0b55f474cd05ddd289ee56c 160 PRINTS PR01011 Glutathione peroxidase family signature 57 73 8.8E-20 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_03515 7a9bcbd9d0b55f474cd05ddd289ee56c 160 PRINTS PR01011 Glutathione peroxidase family signature 22 39 8.8E-20 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_03515 7a9bcbd9d0b55f474cd05ddd289ee56c 160 PIRSF PIRSF000303 1 160 2.6E-67 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 SUPERFAMILY SSF52540 8 345 3.27E-84 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 34 1108 26.914 T 23-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 Pfam PF00270 DEAD/DEAH box helicase 609 766 1.9E-19 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 SUPERFAMILY SSF52540 353 467 6.8E-20 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 Gene3D G3DSA:3.90.1150.50 1006 1151 2.3E-41 T 23-10-2018 IPR037235 TRCF-like, C-terminal domain CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 SMART SM00487 602 797 1.4E-29 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 Gene3D G3DSA:2.30.30.840 485 543 5.4E-227 T 23-10-2018 CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 SUPERFAMILY SSF52540 653 922 3.25E-59 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 Pfam PF02559 CarD-like/TRCF domain 485 575 2.8E-20 T 23-10-2018 IPR003711 CarD-like/TRCF domain CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 Gene3D G3DSA:3.40.50.300 480 991 5.4E-227 T 23-10-2018 CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 SMART SM00982 1010 1110 9.4E-44 T 23-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 Pfam PF00271 Helicase conserved C-terminal domain 807 911 2.6E-17 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 Gene3D G3DSA:3.40.50.11140 359 455 7.6E-10 T 23-10-2018 CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 SUPERFAMILY SSF143517 996 1148 8.89E-41 T 23-10-2018 IPR037235 TRCF-like, C-terminal domain CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1083 0.0 T 23-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 SMART SM00490 828 912 2.0E-19 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 Pfam PF03461 TRCF domain 1011 1101 2.0E-25 T 23-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 Gene3D G3DSA:3.30.2060.10 128 213 5.9E-100 T 23-10-2018 CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 Gene3D G3DSA:3.40.50.300 544 783 5.4E-227 T 23-10-2018 CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 SUPERFAMILY SSF141259 473 550 4.97E-20 T 23-10-2018 IPR036101 CarD-like/TRCF domain superfamily CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 Gene3D G3DSA:3.40.50.11180 27 337 5.9E-100 T 23-10-2018 CDG62_10585 81994976deecff315edaf0a6d70b32a1 1152 SMART SM01058 481 578 4.9E-41 T 23-10-2018 IPR003711 CarD-like/TRCF domain CDG62_15875 a8ca0f45ba5436fce6f475ff95555b7a 243 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 3 242 20.365 T 23-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CDG62_15875 a8ca0f45ba5436fce6f475ff95555b7a 243 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 240 1.0E-38 T 23-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CDG62_15875 a8ca0f45ba5436fce6f475ff95555b7a 243 SUPERFAMILY SSF63848 136 235 3.14E-27 T 23-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 CDG62_15875 a8ca0f45ba5436fce6f475ff95555b7a 243 Gene3D G3DSA:2.160.20.70 132 243 1.4E-27 T 23-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 CDG62_15875 a8ca0f45ba5436fce6f475ff95555b7a 243 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 139 234 2.4E-26 T 23-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CDG62_06200 190b486339e099c196746f01ab104f55 267 Pfam PF01925 Sulfite exporter TauE/SafE 7 259 3.4E-50 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDG62_18970 8d59657d0e00a3b46c74817999d75f3f 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 224 1.9E-10 T 23-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG62_18970 8d59657d0e00a3b46c74817999d75f3f 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 5.4E-24 T 23-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG62_18970 8d59657d0e00a3b46c74817999d75f3f 238 Gene3D G3DSA:3.30.230.70 10 237 8.1E-64 T 23-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG62_18970 8d59657d0e00a3b46c74817999d75f3f 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.465 T 23-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CDG62_18970 8d59657d0e00a3b46c74817999d75f3f 238 SUPERFAMILY SSF54211 1 181 7.59E-47 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_18970 8d59657d0e00a3b46c74817999d75f3f 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 129 - T 23-10-2018 IPR018336 Ribonuclease PH, conserved site CDG62_18970 8d59657d0e00a3b46c74817999d75f3f 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 2.9E-116 T 23-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CDG62_18970 8d59657d0e00a3b46c74817999d75f3f 238 SUPERFAMILY SSF55666 154 236 2.36E-23 T 23-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG62_14920 d80eb6bcc353ff35a2d7ee6346128b80 104 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 28 99 1.2E-17 T 23-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CDG62_14920 d80eb6bcc353ff35a2d7ee6346128b80 104 Gene3D G3DSA:1.10.20.60 9 102 6.0E-21 T 23-10-2018 CDG62_14920 d80eb6bcc353ff35a2d7ee6346128b80 104 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 11 104 22.422 T 23-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CDG62_14920 d80eb6bcc353ff35a2d7ee6346128b80 104 SUPERFAMILY SSF141000 12 102 1.44E-27 T 23-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 CDG62_14920 d80eb6bcc353ff35a2d7ee6346128b80 104 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 13 104 6.6E-28 T 23-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CDG62_16085 06f4ec284721aeb707fec0390385750f 278 SUPERFAMILY SSF53474 1 273 6.72E-80 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_16085 06f4ec284721aeb707fec0390385750f 278 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 276 4.5E-124 T 23-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 CDG62_16085 06f4ec284721aeb707fec0390385750f 278 Pfam PF00756 Putative esterase 22 270 8.3E-54 T 23-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CDG62_16085 06f4ec284721aeb707fec0390385750f 278 Gene3D G3DSA:3.40.50.1820 1 278 1.6E-85 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_05255 8d3ba7846bb3305b8e473957e6e2f270 163 SUPERFAMILY SSF55021 2 76 2.52E-22 T 23-10-2018 CDG62_05255 8d3ba7846bb3305b8e473957e6e2f270 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 6.0E-38 T 23-10-2018 CDG62_05255 8d3ba7846bb3305b8e473957e6e2f270 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 6.3E-64 T 23-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CDG62_05255 8d3ba7846bb3305b8e473957e6e2f270 163 Pfam PF13710 ACT domain 13 73 5.2E-17 T 23-10-2018 CDG62_05255 8d3ba7846bb3305b8e473957e6e2f270 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 1.1E-27 T 23-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CDG62_05255 8d3ba7846bb3305b8e473957e6e2f270 163 SUPERFAMILY SSF55021 79 161 9.16E-27 T 23-10-2018 CDG62_05255 8d3ba7846bb3305b8e473957e6e2f270 163 Gene3D G3DSA:3.30.70.260 1 78 1.2E-34 T 23-10-2018 CDG62_05255 8d3ba7846bb3305b8e473957e6e2f270 163 Gene3D G3DSA:3.30.70.1150 83 163 1.8E-29 T 23-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CDG62_08680 20920e6ccb70f997dfbb970225ef3e22 148 Gene3D G3DSA:3.40.5.10 1 50 9.9E-21 T 23-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08680 20920e6ccb70f997dfbb970225ef3e22 148 Gene3D G3DSA:3.10.430.100 61 148 8.1E-29 T 23-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CDG62_08680 20920e6ccb70f997dfbb970225ef3e22 148 SUPERFAMILY SSF55653 60 148 6.15E-26 T 23-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CDG62_08680 20920e6ccb70f997dfbb970225ef3e22 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08680 20920e6ccb70f997dfbb970225ef3e22 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 4.2E-26 T 23-10-2018 IPR020069 Ribosomal protein L9, C-terminal CDG62_08680 20920e6ccb70f997dfbb970225ef3e22 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 2 46 1.3E-19 T 23-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08680 20920e6ccb70f997dfbb970225ef3e22 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.178 T 23-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_08680 20920e6ccb70f997dfbb970225ef3e22 148 SUPERFAMILY SSF55658 1 56 3.31E-17 T 23-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CDG62_08680 20920e6ccb70f997dfbb970225ef3e22 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 2 148 1.1E-47 T 23-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 Gene3D G3DSA:3.40.50.300 22 412 1.5E-169 T 23-10-2018 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 Pfam PF01043 SecA preprotein cross-linking domain 232 355 1.0E-36 T 23-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 Gene3D G3DSA:3.40.50.300 414 618 5.3E-84 T 23-10-2018 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 SMART SM00958 228 355 9.0E-71 T 23-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 Pfam PF07517 SecA DEAD-like domain 8 399 3.4E-127 T 23-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 PRINTS PR00906 SecA protein signature 117 127 1.5E-68 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 PRINTS PR00906 SecA protein signature 410 423 1.5E-68 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 PRINTS PR00906 SecA protein signature 336 358 1.5E-68 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 PRINTS PR00906 SecA protein signature 373 390 1.5E-68 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 PRINTS PR00906 SecA protein signature 63 87 1.5E-68 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 PRINTS PR00906 SecA protein signature 101 115 1.5E-68 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 PRINTS PR00906 SecA protein signature 170 190 1.5E-68 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 SUPERFAMILY SSF52540 6 412 5.52E-80 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 Pfam PF02810 SEC-C motif 888 906 6.5E-10 T 23-10-2018 IPR004027 SEC-C motif CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 830 19.642 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 SUPERFAMILY SSF81767 227 365 2.49E-40 T 23-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 Pfam PF07516 SecA Wing and Scaffold domain 615 827 2.7E-66 T 23-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 Gene3D G3DSA:1.10.3060.10 619 830 1.9E-72 T 23-10-2018 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 SUPERFAMILY SSF81886 618 896 1.44E-78 T 23-10-2018 IPR036266 SecA, Wing/Scaffold superfamily CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 SMART SM00957 6 399 4.3E-288 T 23-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 814 0.0 T 23-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 SUPERFAMILY SSF52540 413 616 1.31E-53 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 ProSitePatterns PS01312 SecA family signature. 498 513 - T 23-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CDG62_05680 0e54577b2f65c91badbc5acc6c17acad 907 Gene3D G3DSA:3.90.1440.10 229 365 1.5E-169 T 23-10-2018 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 Gene3D G3DSA:3.30.70.1430 558 651 2.4E-273 T 23-10-2018 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 SUPERFAMILY SSF82714 710 793 3.92E-17 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 SUPERFAMILY SSF82866 794 1018 8.63E-43 T 23-10-2018 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 Gene3D G3DSA:3.30.70.1320 133 326 2.4E-273 T 23-10-2018 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 SUPERFAMILY SSF82693 556 644 1.88E-7 T 23-10-2018 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 Pfam PF00873 AcrB/AcrD/AcrF family 7 1014 4.3E-282 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 SUPERFAMILY SSF82714 183 266 1.06E-13 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 Gene3D G3DSA:1.20.1640.10 504 1011 2.4E-273 T 23-10-2018 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 SUPERFAMILY SSF82693 41 133 9.77E-24 T 23-10-2018 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 SUPERFAMILY SSF82866 290 489 4.97E-39 T 23-10-2018 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 Gene3D G3DSA:3.30.70.1430 40 803 2.4E-273 T 23-10-2018 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 Gene3D G3DSA:3.30.2090.10 179 269 2.4E-273 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 Gene3D G3DSA:1.20.1640.10 10 503 2.4E-273 T 23-10-2018 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 Gene3D G3DSA:3.30.70.1440 652 854 2.4E-273 T 23-10-2018 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 Gene3D G3DSA:3.30.2090.10 707 795 2.4E-273 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 SUPERFAMILY SSF82693 137 324 4.36E-21 T 23-10-2018 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.2E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 5.2E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 5.2E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.2E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 5.2E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.2E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.2E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 5.2E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12190 f4a064c2ffe8269887486a8dbbdb11d1 1035 PRINTS PR00702 Acriflavin resistance protein family signature 607 621 5.2E-62 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 Gene3D G3DSA:3.30.420.10 324 538 2.0E-70 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 Pfam PF01612 3'-5' exonuclease 327 513 2.1E-36 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 SMART SM00482 681 885 3.3E-104 T 23-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 SMART SM00474 327 514 1.6E-40 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 ProSitePatterns PS00447 DNA polymerase family A signature. 749 768 - T 23-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 TIGRFAM TIGR00593 pola: DNA polymerase I 5 921 2.3E-294 T 23-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 165 1.9E-50 T 23-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 Gene3D G3DSA:1.10.150.20 704 847 5.8E-109 T 23-10-2018 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 260 6.7E-29 T 23-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 SMART SM00475 1 256 1.2E-116 T 23-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 Gene3D G3DSA:3.40.50.1010 5 272 3.9E-92 T 23-10-2018 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 SUPERFAMILY SSF47807 166 280 2.69E-32 T 23-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 Gene3D G3DSA:1.20.1060.10 540 653 8.3E-39 T 23-10-2018 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 840 856 6.3E-77 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 868 881 6.3E-77 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 725 738 6.3E-77 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 749 774 6.3E-77 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 695 718 6.3E-77 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 650 672 6.3E-77 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 786 797 6.3E-77 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 808 819 6.3E-77 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 673 688 6.3E-77 T 23-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 SMART SM00279 168 203 7.0E-13 T 23-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 Gene3D G3DSA:1.10.150.20 169 241 3.9E-92 T 23-10-2018 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 Gene3D G3DSA:3.30.70.370 659 917 5.8E-109 T 23-10-2018 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 SUPERFAMILY SSF56672 517 921 1.33E-151 T 23-10-2018 CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 SUPERFAMILY SSF88723 1 165 3.92E-52 T 23-10-2018 IPR029060 PIN-like domain superfamily CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 SUPERFAMILY SSF53098 330 515 3.72E-54 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_16300 d198b6f979fa147eedc9871e59100d46 921 Pfam PF00476 DNA polymerase family A 549 919 4.5E-152 T 23-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 Pfam PF00873 AcrB/AcrD/AcrF family 17 1039 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 SUPERFAMILY SSF82866 821 1043 1.06E-51 T 23-10-2018 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 Gene3D G3DSA:3.30.2090.10 739 826 7.8E-291 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 SUPERFAMILY SSF82714 205 286 1.05E-16 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 SUPERFAMILY SSF82714 738 821 5.75E-14 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 Gene3D G3DSA:1.20.1640.10 25 527 7.8E-291 T 23-10-2018 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 SUPERFAMILY SSF82693 582 678 2.62E-5 T 23-10-2018 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 PRINTS PR00702 Acriflavin resistance protein family signature 351 374 1.4E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 PRINTS PR00702 Acriflavin resistance protein family signature 378 399 1.4E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 PRINTS PR00702 Acriflavin resistance protein family signature 492 515 1.4E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 PRINTS PR00702 Acriflavin resistance protein family signature 565 582 1.4E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 1.4E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 1.4E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 Gene3D G3DSA:3.30.70.1430 54 834 7.8E-291 T 23-10-2018 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 SUPERFAMILY SSF82693 167 345 7.32E-22 T 23-10-2018 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 SUPERFAMILY SSF82693 54 140 1.8E-23 T 23-10-2018 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 Gene3D G3DSA:1.20.1640.10 528 1037 7.8E-291 T 23-10-2018 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 SUPERFAMILY SSF82866 311 519 4.19E-37 T 23-10-2018 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 Gene3D G3DSA:3.30.70.1430 582 684 7.8E-291 T 23-10-2018 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 Gene3D G3DSA:3.30.70.1440 685 884 7.8E-291 T 23-10-2018 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 Gene3D G3DSA:3.30.2090.10 201 292 7.8E-291 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 13 1045 0.0 T 23-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CDG62_11135 065c12218d1cff83f63b5b3018e5dc62 1048 Gene3D G3DSA:3.30.70.1320 148 345 7.8E-291 T 23-10-2018 CDG62_01635 c58895af3e54e3b4710c28be5e6821c8 200 SUPERFAMILY SSF56524 11 199 6.93E-55 T 23-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 CDG62_01635 c58895af3e54e3b4710c28be5e6821c8 200 Pfam PF00174 Oxidoreductase molybdopterin binding domain 34 180 5.9E-32 T 23-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CDG62_01635 c58895af3e54e3b4710c28be5e6821c8 200 Gene3D G3DSA:3.90.420.10 26 200 1.1E-34 T 23-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 CDG62_06910 5679433b819ec16712ce7ecb261ed654 424 Gene3D G3DSA:1.10.580.10 59 411 1.5E-145 T 23-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CDG62_06910 5679433b819ec16712ce7ecb261ed654 424 SUPERFAMILY SSF48256 6 421 1.83E-165 T 23-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 CDG62_06910 5679433b819ec16712ce7ecb261ed654 424 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 23-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CDG62_06910 5679433b819ec16712ce7ecb261ed654 424 Gene3D G3DSA:1.10.230.10 271 377 1.5E-145 T 23-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain CDG62_06910 5679433b819ec16712ce7ecb261ed654 424 Pfam PF00285 Citrate synthase, C-terminal domain 48 411 1.3E-134 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG62_06910 5679433b819ec16712ce7ecb261ed654 424 Gene3D G3DSA:2.20.28.60 2 52 1.7E-23 T 23-10-2018 CDG62_06910 5679433b819ec16712ce7ecb261ed654 424 PRINTS PR00143 Citrate synthase signature 360 376 4.5E-55 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG62_06910 5679433b819ec16712ce7ecb261ed654 424 PRINTS PR00143 Citrate synthase signature 167 180 4.5E-55 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG62_06910 5679433b819ec16712ce7ecb261ed654 424 PRINTS PR00143 Citrate synthase signature 244 272 4.5E-55 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG62_06910 5679433b819ec16712ce7ecb261ed654 424 PRINTS PR00143 Citrate synthase signature 380 394 4.5E-55 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG62_06910 5679433b819ec16712ce7ecb261ed654 424 PRINTS PR00143 Citrate synthase signature 222 237 4.5E-55 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG62_06910 5679433b819ec16712ce7ecb261ed654 424 PRINTS PR00143 Citrate synthase signature 297 317 4.5E-55 T 23-10-2018 IPR002020 Citrate synthase GO:0046912 CDG62_06910 5679433b819ec16712ce7ecb261ed654 424 PIRSF PIRSF001369 40 424 8.3E-170 T 23-10-2018 IPR024176 Citrate synthase, bacterial-type CDG62_06910 5679433b819ec16712ce7ecb261ed654 424 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 2.7E-236 T 23-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 CDG62_07315 4d5c9a6c5359a118a07c6ba4caf61666 469 SUPERFAMILY SSF54368 2 99 3.53E-35 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG62_07315 4d5c9a6c5359a118a07c6ba4caf61666 469 Gene3D G3DSA:3.30.590.10 104 457 6.3E-138 T 23-10-2018 CDG62_07315 4d5c9a6c5359a118a07c6ba4caf61666 469 Gene3D G3DSA:3.10.20.70 1 103 5.0E-38 T 23-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG62_07315 4d5c9a6c5359a118a07c6ba4caf61666 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 94 5.2E-31 T 23-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CDG62_07315 4d5c9a6c5359a118a07c6ba4caf61666 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 49 67 - T 23-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CDG62_07315 4d5c9a6c5359a118a07c6ba4caf61666 469 SUPERFAMILY SSF55931 101 468 3.14E-130 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CDG62_07315 4d5c9a6c5359a118a07c6ba4caf61666 469 SMART SM01230 101 379 5.6E-130 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG62_07315 4d5c9a6c5359a118a07c6ba4caf61666 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 1.7E-131 T 23-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG62_07315 4d5c9a6c5359a118a07c6ba4caf61666 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 23-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CDG62_07315 4d5c9a6c5359a118a07c6ba4caf61666 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 23-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG62_07315 4d5c9a6c5359a118a07c6ba4caf61666 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 7.4E-195 T 23-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CDG62_08810 f3fdc3091bd10c17679588cbc59a4e17 256 SUPERFAMILY SSF51735 1 252 1.31E-62 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_08810 f3fdc3091bd10c17679588cbc59a4e17 256 Pfam PF00106 short chain dehydrogenase 6 205 1.2E-48 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_08810 f3fdc3091bd10c17679588cbc59a4e17 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 5.5E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_08810 f3fdc3091bd10c17679588cbc59a4e17 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 5.5E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_08810 f3fdc3091bd10c17679588cbc59a4e17 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 5.5E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_08810 f3fdc3091bd10c17679588cbc59a4e17 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 5.5E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_08810 f3fdc3091bd10c17679588cbc59a4e17 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.5E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_08810 f3fdc3091bd10c17679588cbc59a4e17 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.5E-27 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_08810 f3fdc3091bd10c17679588cbc59a4e17 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 1.3E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_08810 f3fdc3091bd10c17679588cbc59a4e17 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.3E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_08810 f3fdc3091bd10c17679588cbc59a4e17 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.3E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_08810 f3fdc3091bd10c17679588cbc59a4e17 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 197 1.7E-4 T 23-10-2018 CDG62_08810 f3fdc3091bd10c17679588cbc59a4e17 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG62_08810 f3fdc3091bd10c17679588cbc59a4e17 256 Gene3D G3DSA:3.40.50.720 1 255 4.4E-77 T 23-10-2018 CDG62_06045 fed96800ac30ad0792afab7e4b38c5c3 240 PIRSF PIRSF006487 86 232 0.44 T 23-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CDG62_06045 fed96800ac30ad0792afab7e4b38c5c3 240 PIRSF PIRSF006487 1 91 9.6E-7 T 23-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CDG62_06045 fed96800ac30ad0792afab7e4b38c5c3 240 SUPERFAMILY SSF103025 7 167 1.73E-36 T 23-10-2018 CDG62_06045 fed96800ac30ad0792afab7e4b38c5c3 240 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 115 179 2.2E-20 T 23-10-2018 IPR017703 YgfZ/GcvT conserved site CDG62_06045 fed96800ac30ad0792afab7e4b38c5c3 240 Gene3D G3DSA:2.40.30.160 124 231 3.0E-16 T 23-10-2018 CDG62_06045 fed96800ac30ad0792afab7e4b38c5c3 240 Gene3D G3DSA:3.30.70.1400 8 91 3.1E-19 T 23-10-2018 CDG62_06045 fed96800ac30ad0792afab7e4b38c5c3 240 Pfam PF01571 Aminomethyltransferase folate-binding domain 6 91 2.5E-8 T 23-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain CDG62_08160 11e27a58db64ec9c6d85f602f7358759 238 SUPERFAMILY SSF53335 43 232 6.17E-27 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_08160 11e27a58db64ec9c6d85f602f7358759 238 Pfam PF02390 Putative methyltransferase 64 230 9.4E-50 T 23-10-2018 CDG62_08160 11e27a58db64ec9c6d85f602f7358759 238 Gene3D G3DSA:3.40.50.150 34 238 7.0E-58 T 23-10-2018 CDG62_08160 11e27a58db64ec9c6d85f602f7358759 238 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 58 237 3.1E-51 T 23-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CDG62_08160 11e27a58db64ec9c6d85f602f7358759 238 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 26 237 29.137 T 23-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CDG62_16945 d9467df2a1e1f0abb58786430496a2f3 280 SUPERFAMILY SSF55831 1 280 8.9E-127 T 23-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG62_16945 d9467df2a1e1f0abb58786430496a2f3 280 PRINTS PR00108 Thymidylate synthase family signature 42 63 5.6E-47 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG62_16945 d9467df2a1e1f0abb58786430496a2f3 280 PRINTS PR00108 Thymidylate synthase family signature 131 150 5.6E-47 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG62_16945 d9467df2a1e1f0abb58786430496a2f3 280 PRINTS PR00108 Thymidylate synthase family signature 175 201 5.6E-47 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG62_16945 d9467df2a1e1f0abb58786430496a2f3 280 PRINTS PR00108 Thymidylate synthase family signature 213 230 5.6E-47 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG62_16945 d9467df2a1e1f0abb58786430496a2f3 280 PRINTS PR00108 Thymidylate synthase family signature 157 172 5.6E-47 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG62_16945 d9467df2a1e1f0abb58786430496a2f3 280 Gene3D G3DSA:3.30.572.10 1 280 8.0E-130 T 23-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG62_16945 d9467df2a1e1f0abb58786430496a2f3 280 Hamap MF_00008 Thymidylate synthase [thyA]. 1 280 39.45 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG62_16945 d9467df2a1e1f0abb58786430496a2f3 280 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 280 4.8E-138 T 23-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG62_16945 d9467df2a1e1f0abb58786430496a2f3 280 ProSitePatterns PS00091 Thymidylate synthase active site. 142 170 - T 23-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG62_16945 d9467df2a1e1f0abb58786430496a2f3 280 Pfam PF00303 Thymidylate synthase 2 280 5.0E-117 T 23-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CDG62_07685 615786c6207c2b63dd5d970a1550d886 411 Gene3D G3DSA:3.40.50.1820 45 271 1.2E-47 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_07685 615786c6207c2b63dd5d970a1550d886 411 SUPERFAMILY SSF53474 49 393 1.31E-25 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_07685 615786c6207c2b63dd5d970a1550d886 411 Gene3D G3DSA:3.40.50.1820 324 408 2.2E-5 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_07685 615786c6207c2b63dd5d970a1550d886 411 PIRSF PIRSF029171 2 411 2.6E-84 T 23-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 CDG62_07685 615786c6207c2b63dd5d970a1550d886 411 Pfam PF03583 Secretory lipase 126 402 8.1E-9 T 23-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 SMART SM00873 211 384 4.6E-89 T 23-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 Pfam PF01588 Putative tRNA binding domain 45 145 2.3E-27 T 23-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 SMART SM00874 402 471 1.5E-25 T 23-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 Gene3D G3DSA:3.30.56.10 400 474 3.2E-22 T 23-10-2018 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 1.8E-26 T 23-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 43.567 T 23-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 SUPERFAMILY SSF54991 694 791 5.75E-29 T 23-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 Gene3D G3DSA:3.50.40.10 198 394 6.8E-74 T 23-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 Gene3D G3DSA:3.30.930.10 487 688 5.3E-50 T 23-10-2018 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 SUPERFAMILY SSF50249 39 195 3.18E-51 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 2.3E-259 T 23-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 SUPERFAMILY SSF46955 404 475 1.92E-17 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 Gene3D G3DSA:3.30.56.10 7 179 6.2E-72 T 23-10-2018 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 Gene3D G3DSA:2.40.50.140 39 154 6.2E-72 T 23-10-2018 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 SMART SM00896 698 791 5.1E-39 T 23-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 Gene3D G3DSA:3.30.70.380 699 792 5.2E-28 T 23-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 Pfam PF03483 B3/4 domain 211 384 8.5E-67 T 23-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 SUPERFAMILY SSF56037 207 393 3.92E-69 T 23-10-2018 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 SUPERFAMILY SSF55681 467 687 1.89E-45 T 23-10-2018 CDG62_16350 1905bb7d60350e6d7d178f546880ba56 793 Pfam PF03484 tRNA synthetase B5 domain 406 471 4.7E-17 T 23-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.3E-58 T 23-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 SUPERFAMILY SSF50621 226 355 9.77E-44 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 Gene3D G3DSA:2.40.37.10 8 350 1.3E-133 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 Gene3D G3DSA:3.20.20.10 10 217 1.3E-133 T 23-10-2018 IPR029066 PLP-binding barrel CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 Pfam PF00842 Alanine racemase, C-terminal domain 233 353 1.5E-38 T 23-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 Hamap MF_01201 Alanine racemase. 1 356 32.269 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 SUPERFAMILY SSF51419 8 234 8.9E-60 T 23-10-2018 IPR029066 PLP-binding barrel CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 SMART SM01005 233 356 8.7E-58 T 23-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 PRINTS PR00992 Alanine racemase signature 338 351 5.3E-64 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 PRINTS PR00992 Alanine racemase signature 192 219 5.3E-64 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 PRINTS PR00992 Alanine racemase signature 266 281 5.3E-64 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 PRINTS PR00992 Alanine racemase signature 26 42 5.3E-64 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 PRINTS PR00992 Alanine racemase signature 287 304 5.3E-64 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 PRINTS PR00992 Alanine racemase signature 249 264 5.3E-64 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 PRINTS PR00992 Alanine racemase signature 60 78 5.3E-64 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 PRINTS PR00992 Alanine racemase signature 155 166 5.3E-64 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 PRINTS PR00992 Alanine racemase signature 123 135 5.3E-64 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_08670 097c585694840a95c4bbe7a6228a536c 356 TIGRFAM TIGR00492 alr: alanine racemase 2 355 1.4E-103 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_12775 3b48de2496c7b8fd3c7e42cce4ff1f5f 488 SUPERFAMILY SSF55785 215 318 7.23E-11 T 23-10-2018 IPR035965 PAS domain superfamily CDG62_12775 3b48de2496c7b8fd3c7e42cce4ff1f5f 488 Pfam PF00990 Diguanylate cyclase, GGDEF domain 323 470 1.4E-32 T 23-10-2018 IPR000160 GGDEF domain CDG62_12775 3b48de2496c7b8fd3c7e42cce4ff1f5f 488 Gene3D G3DSA:3.30.70.270 324 485 6.1E-36 T 23-10-2018 CDG62_12775 3b48de2496c7b8fd3c7e42cce4ff1f5f 488 SMART SM00267 311 484 1.0E-32 T 23-10-2018 IPR000160 GGDEF domain CDG62_12775 3b48de2496c7b8fd3c7e42cce4ff1f5f 488 SUPERFAMILY SSF55073 327 470 2.2E-30 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_12775 3b48de2496c7b8fd3c7e42cce4ff1f5f 488 Gene3D G3DSA:3.30.450.20 199 323 5.6E-9 T 23-10-2018 CDG62_12775 3b48de2496c7b8fd3c7e42cce4ff1f5f 488 Pfam PF08448 PAS fold 215 312 1.7E-5 T 23-10-2018 IPR013656 PAS fold-4 CDG62_12775 3b48de2496c7b8fd3c7e42cce4ff1f5f 488 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 318 470 1.7E-28 T 23-10-2018 IPR000160 GGDEF domain CDG62_08270 93e5a2ef1c07f7aaec57cf853457382e 511 Gene3D G3DSA:3.40.50.2020 275 445 6.6E-151 T 23-10-2018 CDG62_08270 93e5a2ef1c07f7aaec57cf853457382e 511 SUPERFAMILY SSF56235 2 257 1.2E-69 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG62_08270 93e5a2ef1c07f7aaec57cf853457382e 511 Pfam PF00156 Phosphoribosyl transferase domain 278 394 1.1E-8 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDG62_08270 93e5a2ef1c07f7aaec57cf853457382e 511 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 45.114 T 23-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CDG62_08270 93e5a2ef1c07f7aaec57cf853457382e 511 Pfam PF13522 Glutamine amidotransferase domain 61 207 2.3E-16 T 23-10-2018 CDG62_08270 93e5a2ef1c07f7aaec57cf853457382e 511 Gene3D G3DSA:3.60.20.10 2 466 6.6E-151 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG62_08270 93e5a2ef1c07f7aaec57cf853457382e 511 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.6E-159 T 23-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CDG62_08270 93e5a2ef1c07f7aaec57cf853457382e 511 PIRSF PIRSF000485 1 483 4.1E-167 T 23-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CDG62_08270 93e5a2ef1c07f7aaec57cf853457382e 511 SUPERFAMILY SSF53271 250 483 5.25E-71 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG62_05540 e1d6770368f70548c1a3dd582c72ff26 600 SUPERFAMILY SSF56645 41 280 1.57E-58 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_05540 e1d6770368f70548c1a3dd582c72ff26 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 33 7.9E-15 T 23-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CDG62_05540 e1d6770368f70548c1a3dd582c72ff26 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 273 5.7E-18 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG62_05540 e1d6770368f70548c1a3dd582c72ff26 600 Gene3D G3DSA:2.40.110.10 162 288 6.7E-29 T 23-10-2018 CDG62_05540 e1d6770368f70548c1a3dd582c72ff26 600 Gene3D G3DSA:1.20.140.10 289 498 5.1E-41 T 23-10-2018 CDG62_05540 e1d6770368f70548c1a3dd582c72ff26 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 3.2E-18 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG62_05540 e1d6770368f70548c1a3dd582c72ff26 600 SUPERFAMILY SSF47203 288 475 4.19E-46 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_05540 e1d6770368f70548c1a3dd582c72ff26 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 594 3.7E-36 T 23-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDG62_05540 e1d6770368f70548c1a3dd582c72ff26 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 158 1.7E-14 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG62_05540 e1d6770368f70548c1a3dd582c72ff26 600 Gene3D G3DSA:1.10.540.10 18 160 9.4E-17 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG62_09205 4dea55f47459d9b1fceafb823f468250 424 SUPERFAMILY SSF103473 15 407 3.4E-32 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_09205 4dea55f47459d9b1fceafb823f468250 424 Gene3D G3DSA:1.20.1250.20 11 401 1.5E-26 T 23-10-2018 CDG62_09205 4dea55f47459d9b1fceafb823f468250 424 Pfam PF07690 Major Facilitator Superfamily 22 366 4.0E-22 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_12840 40b5d17bf5669f13c0c770dbcc958485 342 Hamap MF_00367 GTPase Era [era]. 37 339 36.463 T 23-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_12840 40b5d17bf5669f13c0c770dbcc958485 342 Pfam PF07650 KH domain 271 327 4.3E-13 T 23-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_12840 40b5d17bf5669f13c0c770dbcc958485 342 Gene3D G3DSA:3.30.300.20 217 341 1.9E-40 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG62_12840 40b5d17bf5669f13c0c770dbcc958485 342 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 41 202 3.9E-34 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG62_12840 40b5d17bf5669f13c0c770dbcc958485 342 SUPERFAMILY SSF54814 214 340 6.98E-38 T 23-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 CDG62_12840 40b5d17bf5669f13c0c770dbcc958485 342 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 110 128 2.0E-6 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_12840 40b5d17bf5669f13c0c770dbcc958485 342 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 42 62 2.0E-6 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_12840 40b5d17bf5669f13c0c770dbcc958485 342 SUPERFAMILY SSF52540 39 251 1.14E-47 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12840 40b5d17bf5669f13c0c770dbcc958485 342 TIGRFAM TIGR00436 era: GTP-binding protein Era 40 322 2.5E-94 T 23-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_12840 40b5d17bf5669f13c0c770dbcc958485 342 Pfam PF01926 50S ribosome-binding GTPase 42 156 8.6E-26 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_12840 40b5d17bf5669f13c0c770dbcc958485 342 Gene3D G3DSA:3.40.50.300 36 214 4.5E-52 T 23-10-2018 CDG62_06185 8cf35da27fb751bd87d8919ea7963478 199 SUPERFAMILY SSF53474 6 187 1.24E-26 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_06185 8cf35da27fb751bd87d8919ea7963478 199 Pfam PF06821 Serine hydrolase 8 187 2.0E-32 T 23-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 CDG62_06185 8cf35da27fb751bd87d8919ea7963478 199 Gene3D G3DSA:3.40.50.1820 1 196 1.2E-43 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_13410 1c5964353a2157ca070b09fa7efe8cb0 565 Gene3D G3DSA:3.30.70.610 365 431 5.7E-16 T 23-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CDG62_13410 1c5964353a2157ca070b09fa7efe8cb0 565 Gene3D G3DSA:3.30.70.610 268 347 2.2E-12 T 23-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CDG62_13410 1c5964353a2157ca070b09fa7efe8cb0 565 Pfam PF01565 FAD binding domain 45 165 4.9E-7 T 23-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CDG62_13410 1c5964353a2157ca070b09fa7efe8cb0 565 Pfam PF09330 D-lactate dehydrogenase, membrane binding 276 564 3.4E-134 T 23-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CDG62_13410 1c5964353a2157ca070b09fa7efe8cb0 565 SUPERFAMILY SSF56176 8 270 5.14E-66 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG62_13410 1c5964353a2157ca070b09fa7efe8cb0 565 Gene3D G3DSA:3.30.1370.20 432 516 1.9E-39 T 23-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CDG62_13410 1c5964353a2157ca070b09fa7efe8cb0 565 Gene3D G3DSA:3.30.43.10 2 101 1.6E-12 T 23-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CDG62_13410 1c5964353a2157ca070b09fa7efe8cb0 565 SUPERFAMILY SSF55103 274 564 6.32E-103 T 23-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CDG62_13410 1c5964353a2157ca070b09fa7efe8cb0 565 PIRSF PIRSF000101 2 565 4.3E-269 T 23-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CDG62_13410 1c5964353a2157ca070b09fa7efe8cb0 565 Gene3D G3DSA:3.30.465.10 104 267 1.7E-73 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG62_13410 1c5964353a2157ca070b09fa7efe8cb0 565 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 8 565 56.581 T 23-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 CDG62_17645 94077dfb6d1c2e5d10415a10dca003e7 134 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 121 3.7E-26 T 23-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CDG62_17645 94077dfb6d1c2e5d10415a10dca003e7 134 Gene3D G3DSA:3.30.300.20 2 111 8.7E-37 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG62_17645 94077dfb6d1c2e5d10415a10dca003e7 134 Pfam PF02033 Ribosome-binding factor A 6 114 2.0E-31 T 23-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CDG62_17645 94077dfb6d1c2e5d10415a10dca003e7 134 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 104 7.0E-48 T 23-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CDG62_17645 94077dfb6d1c2e5d10415a10dca003e7 134 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 117 25.164 T 23-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 CDG62_17645 94077dfb6d1c2e5d10415a10dca003e7 134 SUPERFAMILY SSF89919 1 119 1.7E-32 T 23-10-2018 IPR023799 Ribosome-binding factor A domain superfamily CDG62_12425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 SUPERFAMILY SSF50129 2 95 9.14E-34 T 23-10-2018 IPR011032 GroES-like superfamily CDG62_12425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 SMART SM00883 3 95 4.8E-54 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_12425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Gene3D G3DSA:2.30.33.40 2 96 7.8E-36 T 23-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 CDG62_12425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Hamap MF_00580 10 kDa chaperonin [groS]. 3 96 26.628 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_12425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 26 47 1.9E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_12425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.9E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_12425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 4 19 1.9E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_12425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 61 73 1.9E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_12425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 4 28 - T 23-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CDG62_12425 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 3.2E-33 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_00880 ccc009db0ff3e6bd9465ed1628dbbd2f 96 SUPERFAMILY SSF50129 2 95 9.14E-34 T 23-10-2018 IPR011032 GroES-like superfamily CDG62_00880 ccc009db0ff3e6bd9465ed1628dbbd2f 96 SMART SM00883 3 95 4.8E-54 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_00880 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Gene3D G3DSA:2.30.33.40 2 96 7.8E-36 T 23-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 CDG62_00880 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Hamap MF_00580 10 kDa chaperonin [groS]. 3 96 26.628 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_00880 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 26 47 1.9E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_00880 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.9E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_00880 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 4 19 1.9E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_00880 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 61 73 1.9E-32 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_00880 ccc009db0ff3e6bd9465ed1628dbbd2f 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 4 28 - T 23-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CDG62_00880 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 3.2E-33 T 23-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CDG62_18955 b34193b307dbce3ef29023c28dc6e510 515 PIRSF PIRSF002869 1 514 3.0E-155 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG62_18955 b34193b307dbce3ef29023c28dc6e510 515 PRINTS PR01806 Virulence factor MviN signature 52 68 1.6E-69 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG62_18955 b34193b307dbce3ef29023c28dc6e510 515 PRINTS PR01806 Virulence factor MviN signature 133 157 1.6E-69 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG62_18955 b34193b307dbce3ef29023c28dc6e510 515 PRINTS PR01806 Virulence factor MviN signature 33 52 1.6E-69 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG62_18955 b34193b307dbce3ef29023c28dc6e510 515 PRINTS PR01806 Virulence factor MviN signature 357 376 1.6E-69 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG62_18955 b34193b307dbce3ef29023c28dc6e510 515 PRINTS PR01806 Virulence factor MviN signature 157 178 1.6E-69 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG62_18955 b34193b307dbce3ef29023c28dc6e510 515 PRINTS PR01806 Virulence factor MviN signature 259 285 1.6E-69 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG62_18955 b34193b307dbce3ef29023c28dc6e510 515 PRINTS PR01806 Virulence factor MviN signature 416 433 1.6E-69 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG62_18955 b34193b307dbce3ef29023c28dc6e510 515 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 505 2.5E-133 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG62_18955 b34193b307dbce3ef29023c28dc6e510 515 Pfam PF03023 MviN-like protein 30 474 1.8E-130 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG62_18955 b34193b307dbce3ef29023c28dc6e510 515 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 474 19.567 T 23-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CDG62_16495 85fdb5ec62b7c27c35492c0e169d45de 309 Gene3D G3DSA:3.40.50.1100 46 151 1.6E-110 T 23-10-2018 CDG62_16495 85fdb5ec62b7c27c35492c0e169d45de 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 292 1.6E-68 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG62_16495 85fdb5ec62b7c27c35492c0e169d45de 309 TIGRFAM TIGR01138 cysM: cysteine synthase B 16 303 1.2E-145 T 23-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CDG62_16495 85fdb5ec62b7c27c35492c0e169d45de 309 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 41 59 - T 23-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CDG62_16495 85fdb5ec62b7c27c35492c0e169d45de 309 TIGRFAM TIGR01136 cysKM: cysteine synthase 17 303 4.8E-122 T 23-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CDG62_16495 85fdb5ec62b7c27c35492c0e169d45de 309 SUPERFAMILY SSF53686 17 303 1.11E-93 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG62_16495 85fdb5ec62b7c27c35492c0e169d45de 309 Gene3D G3DSA:3.40.50.1100 19 299 1.6E-110 T 23-10-2018 CDG62_17260 2ebce751e74c8a46a03f3ba630b4525f 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.6E-21 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_17260 2ebce751e74c8a46a03f3ba630b4525f 299 Gene3D G3DSA:3.40.190.10 163 267 3.9E-49 T 23-10-2018 CDG62_17260 2ebce751e74c8a46a03f3ba630b4525f 299 Gene3D G3DSA:1.10.10.10 1 93 2.2E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_17260 2ebce751e74c8a46a03f3ba630b4525f 299 SUPERFAMILY SSF46785 1 86 2.4E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_17260 2ebce751e74c8a46a03f3ba630b4525f 299 SUPERFAMILY SSF53850 93 291 2.65E-32 T 23-10-2018 CDG62_17260 2ebce751e74c8a46a03f3ba630b4525f 299 Gene3D G3DSA:3.40.190.10 94 291 3.9E-49 T 23-10-2018 CDG62_17260 2ebce751e74c8a46a03f3ba630b4525f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.4E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_17260 2ebce751e74c8a46a03f3ba630b4525f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.4E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_17260 2ebce751e74c8a46a03f3ba630b4525f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.4E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_17260 2ebce751e74c8a46a03f3ba630b4525f 299 Pfam PF03466 LysR substrate binding domain 87 291 8.5E-36 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_10570 d0822ea9591e5e5f0850baa837a88ff3 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 54 3.2E-16 T 23-10-2018 CDG62_10570 d0822ea9591e5e5f0850baa837a88ff3 164 SUPERFAMILY SSF54909 70 155 4.16E-19 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_10570 d0822ea9591e5e5f0850baa837a88ff3 164 Pfam PF01037 Lrp/AsnC ligand binding domain 75 147 3.9E-18 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG62_10570 d0822ea9591e5e5f0850baa837a88ff3 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 4.4E-13 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_10570 d0822ea9591e5e5f0850baa837a88ff3 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 4.4E-13 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_10570 d0822ea9591e5e5f0850baa837a88ff3 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 4.4E-13 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_10570 d0822ea9591e5e5f0850baa837a88ff3 164 SMART SM00344 8 117 2.9E-38 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG62_10570 d0822ea9591e5e5f0850baa837a88ff3 164 SUPERFAMILY SSF46785 7 66 8.44E-15 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_10570 d0822ea9591e5e5f0850baa837a88ff3 164 Gene3D G3DSA:3.30.70.920 62 158 5.1E-19 T 23-10-2018 CDG62_10570 d0822ea9591e5e5f0850baa837a88ff3 164 Gene3D G3DSA:1.10.10.10 2 61 5.7E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_08125 a6b8a43d08994aed5247a20f9c67ef2a 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 7.0E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_08125 a6b8a43d08994aed5247a20f9c67ef2a 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 7.0E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_08125 a6b8a43d08994aed5247a20f9c67ef2a 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 4.9E-15 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_08125 a6b8a43d08994aed5247a20f9c67ef2a 209 Gene3D G3DSA:1.10.357.10 10 209 6.5E-34 T 23-10-2018 CDG62_08125 a6b8a43d08994aed5247a20f9c67ef2a 209 SUPERFAMILY SSF46689 8 81 4.99E-17 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_09210 a0c6f2e95f25d5910d1513389495fde6 544 SUPERFAMILY SSF51905 38 357 1.94E-24 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_09210 a0c6f2e95f25d5910d1513389495fde6 544 Gene3D G3DSA:3.50.50.60 43 290 2.2E-5 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_09210 a0c6f2e95f25d5910d1513389495fde6 544 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 41 524 2.0E-219 T 23-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CDG62_09210 a0c6f2e95f25d5910d1513389495fde6 544 Gene3D G3DSA:3.30.9.10 145 209 2.2E-5 T 23-10-2018 CDG62_09210 a0c6f2e95f25d5910d1513389495fde6 544 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 37 524 49.496 T 23-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CDG62_09210 a0c6f2e95f25d5910d1513389495fde6 544 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 41 522 5.9E-193 T 23-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CDG62_12480 da81481e9e9010a583019d7e5b20aefd 267 PIRSF PIRSF000706 2 265 9.4E-81 T 23-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 CDG62_12480 da81481e9e9010a583019d7e5b20aefd 267 Pfam PF01636 Phosphotransferase enzyme family 17 258 1.2E-29 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase CDG62_12480 da81481e9e9010a583019d7e5b20aefd 267 Gene3D G3DSA:3.30.200.20 8 83 2.0E-16 T 23-10-2018 CDG62_12480 da81481e9e9010a583019d7e5b20aefd 267 Gene3D G3DSA:3.90.1200.10 84 264 4.5E-53 T 23-10-2018 CDG62_12480 da81481e9e9010a583019d7e5b20aefd 267 SUPERFAMILY SSF56112 6 263 1.9E-42 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_13545 c1daaa1e14735e3e4b4b4bb21cfa176a 258 ProSitePatterns PS00893 Nudix box signature. 155 176 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDG62_13545 c1daaa1e14735e3e4b4b4bb21cfa176a 258 Pfam PF00293 NUDIX domain 123 230 8.0E-19 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG62_13545 c1daaa1e14735e3e4b4b4bb21cfa176a 258 Gene3D G3DSA:3.90.79.20 3 119 1.8E-20 T 23-10-2018 CDG62_13545 c1daaa1e14735e3e4b4b4bb21cfa176a 258 SUPERFAMILY SSF55811 72 241 7.99E-46 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG62_13545 c1daaa1e14735e3e4b4b4bb21cfa176a 258 Gene3D G3DSA:3.90.79.10 120 250 3.1E-39 T 23-10-2018 CDG62_13545 c1daaa1e14735e3e4b4b4bb21cfa176a 258 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 87 118 4.9E-12 T 23-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CDG62_13545 c1daaa1e14735e3e4b4b4bb21cfa176a 258 PRINTS PR00502 NUDIX hydrolase family signature 150 164 8.9E-5 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG62_13545 c1daaa1e14735e3e4b4b4bb21cfa176a 258 PRINTS PR00502 NUDIX hydrolase family signature 164 179 8.9E-5 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG62_12905 4b2c852469191f900b4187fbdc1958e9 201 Pfam PF06821 Serine hydrolase 4 178 3.4E-55 T 23-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 CDG62_12905 4b2c852469191f900b4187fbdc1958e9 201 SUPERFAMILY SSF53474 4 179 2.18E-33 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_12905 4b2c852469191f900b4187fbdc1958e9 201 Gene3D G3DSA:3.40.50.1820 2 184 5.4E-50 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_04715 5cdb93806056dc339adcf64e9aa7920e 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.2E-22 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04715 5cdb93806056dc339adcf64e9aa7920e 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.2E-22 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04715 5cdb93806056dc339adcf64e9aa7920e 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.2E-22 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04715 5cdb93806056dc339adcf64e9aa7920e 91 PIRSF PIRSF002144 1 91 7.6E-31 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04715 5cdb93806056dc339adcf64e9aa7920e 91 Gene3D G3DSA:3.30.860.10 1 91 8.8E-39 T 23-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04715 5cdb93806056dc339adcf64e9aa7920e 91 SUPERFAMILY SSF54570 3 84 9.55E-34 T 23-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04715 5cdb93806056dc339adcf64e9aa7920e 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 4.6E-43 T 23-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDG62_04715 5cdb93806056dc339adcf64e9aa7920e 91 Pfam PF00203 Ribosomal protein S19 3 83 1.1E-34 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04715 5cdb93806056dc339adcf64e9aa7920e 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04715 5cdb93806056dc339adcf64e9aa7920e 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.564 T 23-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_05450 5cc520a908273e5af577615ed2706c78 353 Gene3D G3DSA:3.40.50.720 2 323 2.6E-134 T 23-10-2018 CDG62_05450 5cc520a908273e5af577615ed2706c78 353 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 337 9.5E-154 T 23-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CDG62_05450 5cc520a908273e5af577615ed2706c78 353 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 1.3E-97 T 23-10-2018 IPR016040 NAD(P)-binding domain CDG62_05450 5cc520a908273e5af577615ed2706c78 353 Gene3D G3DSA:3.90.25.10 201 331 2.6E-134 T 23-10-2018 CDG62_05450 5cc520a908273e5af577615ed2706c78 353 SUPERFAMILY SSF51735 1 345 9.14E-92 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_01850 3a325b13dd58c32f6246302fee860df3 613 Gene3D G3DSA:3.40.50.300 352 608 8.5E-91 T 23-10-2018 CDG62_01850 3a325b13dd58c32f6246302fee860df3 613 Gene3D G3DSA:1.20.1560.10 6 347 1.3E-26 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG62_01850 3a325b13dd58c32f6246302fee860df3 613 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_01850 3a325b13dd58c32f6246302fee860df3 613 Pfam PF00664 ABC transporter transmembrane region 40 309 2.6E-21 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDG62_01850 3a325b13dd58c32f6246302fee860df3 613 Pfam PF00005 ABC transporter 382 535 7.7E-35 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_01850 3a325b13dd58c32f6246302fee860df3 613 SUPERFAMILY SSF90123 29 342 4.05E-51 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG62_01850 3a325b13dd58c32f6246302fee860df3 613 SUPERFAMILY SSF52540 351 605 1.07E-87 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_01850 3a325b13dd58c32f6246302fee860df3 613 SMART SM00382 390 581 7.9E-22 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_09810 75f7be6bf5be37d0c7a8d214ab2e16e3 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 23-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CDG62_09810 75f7be6bf5be37d0c7a8d214ab2e16e3 417 SMART SM01329 30 412 3.5E-176 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CDG62_09810 75f7be6bf5be37d0c7a8d214ab2e16e3 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 412 8.8E-112 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CDG62_09810 75f7be6bf5be37d0c7a8d214ab2e16e3 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 417 3.4E-217 T 23-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CDG62_09810 75f7be6bf5be37d0c7a8d214ab2e16e3 417 Gene3D G3DSA:3.40.718.10 1 417 4.9E-179 T 23-10-2018 CDG62_09810 75f7be6bf5be37d0c7a8d214ab2e16e3 417 SUPERFAMILY SSF53659 4 416 1.48E-141 T 23-10-2018 CDG62_02235 d5f8ee7669d3293fdcfedfe7569b247c 81 Gene3D G3DSA:3.40.30.10 2 81 5.4E-12 T 23-10-2018 CDG62_02235 d5f8ee7669d3293fdcfedfe7569b247c 81 Pfam PF00462 Glutaredoxin 4 62 6.3E-7 T 23-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CDG62_02235 d5f8ee7669d3293fdcfedfe7569b247c 81 SUPERFAMILY SSF52833 3 59 3.97E-9 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_00970 83a27f57387b05019b5ea38c9443637d 100 Pfam PF13744 Helix-turn-helix domain 14 89 1.6E-12 T 23-10-2018 IPR039554 HigA2-like, helix-turn-helix domain CDG62_00970 83a27f57387b05019b5ea38c9443637d 100 Gene3D G3DSA:1.10.260.40 15 89 1.8E-12 T 23-10-2018 CDG62_00970 83a27f57387b05019b5ea38c9443637d 100 SUPERFAMILY SSF47413 20 92 1.26E-16 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG62_00970 83a27f57387b05019b5ea38c9443637d 100 SMART SM00530 32 87 2.1E-9 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 Gene3D G3DSA:3.30.1370.120 348 458 1.6E-21 T 23-10-2018 IPR038591 NolW-like superfamily CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 457 467 1.2E-19 T 23-10-2018 IPR001775 GspD/PilQ family CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 672 686 1.2E-19 T 23-10-2018 IPR001775 GspD/PilQ family CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 649 667 1.2E-19 T 23-10-2018 IPR001775 GspD/PilQ family CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 561 571 1.2E-19 T 23-10-2018 IPR001775 GspD/PilQ family CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 526 550 1.2E-19 T 23-10-2018 IPR001775 GspD/PilQ family CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 Pfam PF03958 Bacterial type II/III secretion system short domain 376 457 1.9E-12 T 23-10-2018 IPR005644 NolW-like CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 SMART SM00965 301 349 3.7E-10 T 23-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 Gene3D G3DSA:2.60.40.3470 134 262 7.6E-30 T 23-10-2018 CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 630 663 - T 23-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 Pfam PF07660 Secretin and TonB N terminus short domain 304 348 6.6E-8 T 23-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 Pfam PF11741 AMIN domain 55 132 1.7E-6 T 23-10-2018 IPR021731 AMIN domain CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 Pfam PF00263 Bacterial type II and III secretion system protein 530 684 1.1E-45 T 23-10-2018 IPR004846 Type II/III secretion system GO:0009306 CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 276 685 3.0E-145 T 23-10-2018 IPR013355 Type IV pilus secretin PilQ CDG62_04195 66f018fd7ad2755141fa95f054ac591e 692 Gene3D G3DSA:3.55.50.30 275 344 2.4E-9 T 23-10-2018 CDG62_17710 2d7855ad83e0d585fce674412ae6ed9e 286 Pfam PF01478 Type IV leader peptidase family 138 247 8.9E-21 T 23-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CDG62_17710 2d7855ad83e0d585fce674412ae6ed9e 286 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 21 127 3.1E-32 T 23-10-2018 IPR010627 Peptidase A24A, N-terminal CDG62_17710 2d7855ad83e0d585fce674412ae6ed9e 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 147 164 1.3E-23 T 23-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CDG62_17710 2d7855ad83e0d585fce674412ae6ed9e 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 227 242 1.3E-23 T 23-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CDG62_17710 2d7855ad83e0d585fce674412ae6ed9e 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 204 214 1.3E-23 T 23-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CDG62_17710 2d7855ad83e0d585fce674412ae6ed9e 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 215 226 1.3E-23 T 23-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CDG62_09835 4299f077738d1397288c33b617532d20 201 Pfam PF01613 Flavin reductase like domain 24 171 1.3E-16 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CDG62_09835 4299f077738d1397288c33b617532d20 201 Gene3D G3DSA:2.30.110.10 2 195 4.0E-46 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CDG62_09835 4299f077738d1397288c33b617532d20 201 SMART SM00903 20 167 7.0E-14 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CDG62_09835 4299f077738d1397288c33b617532d20 201 SUPERFAMILY SSF50475 14 192 5.4E-35 T 23-10-2018 CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 SUPERFAMILY SSF101904 536 642 2.35E-34 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 Gene3D G3DSA:3.30.1360.40 234 331 7.7E-220 T 23-10-2018 CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 733 775 2.4E-8 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 855 901 6.3E-16 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 906 951 2.5E-11 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 543 588 6.1E-10 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 640 2.2E-7 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 780 813 5.6E-9 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 30 509 1.2E-152 T 23-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 953 23.226 T 23-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 6 643 5.8E-284 T 23-10-2018 CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 Gene3D G3DSA:2.120.10.90 533 656 3.0E-39 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 Gene3D G3DSA:2.120.10.90 688 951 1.0E-66 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 SMART SM00434 9 502 2.7E-267 T 23-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 Gene3D G3DSA:3.90.199.10 31 524 7.7E-220 T 23-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 SUPERFAMILY SSF101904 713 960 1.44E-57 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 SUPERFAMILY SSF56719 28 525 2.62E-173 T 23-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDG62_07465 6d2817e0dd270e0b93932468800bdc60 993 Gene3D G3DSA:1.10.268.10 368 496 7.7E-220 T 23-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDG62_02310 a4e4bb7252ef12c4b00db2c3fae0f512 311 Gene3D G3DSA:3.40.1350.10 182 303 1.1E-14 T 23-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 CDG62_02310 a4e4bb7252ef12c4b00db2c3fae0f512 311 Pfam PF01939 Endonuclease NucS 210 282 2.5E-9 T 23-10-2018 IPR002793 Endonuclease NucS GO:0004519 CDG62_05855 95c63f13d9e032690072d5f23917706c 443 Pfam PF13167 GTP-binding GTPase N-terminal 28 113 6.1E-30 T 23-10-2018 IPR025121 GTPase HflX, N-terminal CDG62_05855 95c63f13d9e032690072d5f23917706c 443 Gene3D G3DSA:3.40.50.300 198 365 6.3E-39 T 23-10-2018 CDG62_05855 95c63f13d9e032690072d5f23917706c 443 Pfam PF01926 50S ribosome-binding GTPase 201 318 5.7E-21 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_05855 95c63f13d9e032690072d5f23917706c 443 SUPERFAMILY SSF54980 368 416 2.81E-5 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG62_05855 95c63f13d9e032690072d5f23917706c 443 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 13 360 3.5E-143 T 23-10-2018 IPR016496 GTPase HflX GO:0005525 CDG62_05855 95c63f13d9e032690072d5f23917706c 443 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 7.4E-8 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_05855 95c63f13d9e032690072d5f23917706c 443 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 7.4E-8 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_05855 95c63f13d9e032690072d5f23917706c 443 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 7.4E-8 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_05855 95c63f13d9e032690072d5f23917706c 443 Hamap MF_00900 GTPase HflX [hflX]. 27 389 46.584 T 23-10-2018 IPR016496 GTPase HflX GO:0005525 CDG62_05855 95c63f13d9e032690072d5f23917706c 443 SUPERFAMILY SSF52540 199 371 3.05E-41 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_05855 95c63f13d9e032690072d5f23917706c 443 Gene3D G3DSA:3.40.50.11060 17 139 1.5E-36 T 23-10-2018 CDG62_05855 95c63f13d9e032690072d5f23917706c 443 Pfam PF16360 GTP-binding GTPase Middle Region 115 193 9.7E-26 T 23-10-2018 IPR032305 GTP-binding protein, middle domain CDG62_05855 95c63f13d9e032690072d5f23917706c 443 PIRSF PIRSF006809 5 420 1.9E-137 T 23-10-2018 IPR016496 GTPase HflX GO:0005525 CDG62_04055 a389389a367277f3f57f5f7eef967045 505 Gene3D G3DSA:3.40.1080.20 337 478 2.6E-39 T 23-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily CDG62_04055 a389389a367277f3f57f5f7eef967045 505 Gene3D G3DSA:3.40.1080.10 13 184 1.1E-16 T 23-10-2018 CDG62_04055 a389389a367277f3f57f5f7eef967045 505 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 11 215 1.1E-29 T 23-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 CDG62_04055 a389389a367277f3f57f5f7eef967045 505 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 12 495 5.3E-232 T 23-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 CDG62_04055 a389389a367277f3f57f5f7eef967045 505 SUPERFAMILY SSF100950 4 218 7.96E-75 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG62_04055 a389389a367277f3f57f5f7eef967045 505 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 321 464 1.3E-41 T 23-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CDG62_04055 a389389a367277f3f57f5f7eef967045 505 SUPERFAMILY SSF100950 226 495 1.41E-82 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG62_04055 a389389a367277f3f57f5f7eef967045 505 Gene3D G3DSA:3.30.750.70 247 325 5.1E-6 T 23-10-2018 CDG62_13800 45ff1c0ff5c3a6c4e4abef626eebd22d 405 Gene3D G3DSA:2.40.160.60 31 405 3.4E-26 T 23-10-2018 CDG62_13800 45ff1c0ff5c3a6c4e4abef626eebd22d 405 SUPERFAMILY SSF56935 31 372 1.7E-43 T 23-10-2018 CDG62_13800 45ff1c0ff5c3a6c4e4abef626eebd22d 405 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 41 404 9.0E-13 T 23-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDG62_07800 77fcc8ff3cf926679b4e25115b370e1e 120 Pfam PF04076 Bacterial OB fold (BOF) protein 32 119 5.7E-24 T 23-10-2018 IPR005220 Bacterial OB-fold CDG62_07800 77fcc8ff3cf926679b4e25115b370e1e 120 Gene3D G3DSA:2.40.50.200 14 120 6.6E-29 T 23-10-2018 IPR036700 Bacterial OB-fold superfamily CDG62_07800 77fcc8ff3cf926679b4e25115b370e1e 120 SUPERFAMILY SSF101756 32 119 3.14E-25 T 23-10-2018 IPR036700 Bacterial OB-fold superfamily CDG62_14365 7953ba1d4a6379e864703856d485cf6c 315 SUPERFAMILY SSF53098 160 306 2.28E-23 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_14365 7953ba1d4a6379e864703856d485cf6c 315 Gene3D G3DSA:3.30.420.10 151 312 6.5E-11 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_14365 7953ba1d4a6379e864703856d485cf6c 315 Pfam PF13936 Helix-turn-helix domain 3 45 1.5E-17 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG62_14365 7953ba1d4a6379e864703856d485cf6c 315 Gene3D G3DSA:1.10.10.10 2 62 3.9E-5 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_14365 7953ba1d4a6379e864703856d485cf6c 315 Pfam PF00665 Integrase core domain 163 264 7.6E-10 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_06035 7953ba1d4a6379e864703856d485cf6c 315 SUPERFAMILY SSF53098 160 306 2.28E-23 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_06035 7953ba1d4a6379e864703856d485cf6c 315 Gene3D G3DSA:3.30.420.10 151 312 6.5E-11 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_06035 7953ba1d4a6379e864703856d485cf6c 315 Pfam PF13936 Helix-turn-helix domain 3 45 1.5E-17 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG62_06035 7953ba1d4a6379e864703856d485cf6c 315 Gene3D G3DSA:1.10.10.10 2 62 3.9E-5 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_06035 7953ba1d4a6379e864703856d485cf6c 315 Pfam PF00665 Integrase core domain 163 264 7.6E-10 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_14945 7953ba1d4a6379e864703856d485cf6c 315 SUPERFAMILY SSF53098 160 306 2.28E-23 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_14945 7953ba1d4a6379e864703856d485cf6c 315 Gene3D G3DSA:3.30.420.10 151 312 6.5E-11 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_14945 7953ba1d4a6379e864703856d485cf6c 315 Pfam PF13936 Helix-turn-helix domain 3 45 1.5E-17 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG62_14945 7953ba1d4a6379e864703856d485cf6c 315 Gene3D G3DSA:1.10.10.10 2 62 3.9E-5 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_14945 7953ba1d4a6379e864703856d485cf6c 315 Pfam PF00665 Integrase core domain 163 264 7.6E-10 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_12705 7953ba1d4a6379e864703856d485cf6c 315 SUPERFAMILY SSF53098 160 306 2.28E-23 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_12705 7953ba1d4a6379e864703856d485cf6c 315 Gene3D G3DSA:3.30.420.10 151 312 6.5E-11 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_12705 7953ba1d4a6379e864703856d485cf6c 315 Pfam PF13936 Helix-turn-helix domain 3 45 1.5E-17 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG62_12705 7953ba1d4a6379e864703856d485cf6c 315 Gene3D G3DSA:1.10.10.10 2 62 3.9E-5 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_12705 7953ba1d4a6379e864703856d485cf6c 315 Pfam PF00665 Integrase core domain 163 264 7.6E-10 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_11260 7953ba1d4a6379e864703856d485cf6c 315 SUPERFAMILY SSF53098 160 306 2.28E-23 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_11260 7953ba1d4a6379e864703856d485cf6c 315 Gene3D G3DSA:3.30.420.10 151 312 6.5E-11 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_11260 7953ba1d4a6379e864703856d485cf6c 315 Pfam PF13936 Helix-turn-helix domain 3 45 1.5E-17 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG62_11260 7953ba1d4a6379e864703856d485cf6c 315 Gene3D G3DSA:1.10.10.10 2 62 3.9E-5 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_11260 7953ba1d4a6379e864703856d485cf6c 315 Pfam PF00665 Integrase core domain 163 264 7.6E-10 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_04000 1e3ea6e8f65c62120d9daf9a2f3898a7 182 Gene3D G3DSA:1.10.260.40 3 75 9.5E-17 T 23-10-2018 CDG62_04000 1e3ea6e8f65c62120d9daf9a2f3898a7 182 Pfam PF01381 Helix-turn-helix 15 65 9.0E-12 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_04000 1e3ea6e8f65c62120d9daf9a2f3898a7 182 SUPERFAMILY SSF47413 8 72 8.85E-15 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG62_04000 1e3ea6e8f65c62120d9daf9a2f3898a7 182 Pfam PF07883 Cupin domain 111 177 3.8E-8 T 23-10-2018 IPR013096 Cupin 2, conserved barrel CDG62_04000 1e3ea6e8f65c62120d9daf9a2f3898a7 182 SUPERFAMILY SSF51182 88 177 1.57E-14 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG62_04000 1e3ea6e8f65c62120d9daf9a2f3898a7 182 SMART SM00530 13 68 3.7E-13 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_04000 1e3ea6e8f65c62120d9daf9a2f3898a7 182 Gene3D G3DSA:2.60.120.10 93 182 7.1E-17 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 Pfam PF03477 ATP cone domain 11 108 3.3E-18 T 23-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 Pfam PF03477 ATP cone domain 123 201 9.3E-7 T 23-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 261 332 5.0E-19 T 23-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 SUPERFAMILY SSF48168 128 336 4.45E-57 T 23-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 716 738 - T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 Pfam PF02867 Ribonucleotide reductase, barrel domain 338 872 2.1E-184 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 Gene3D G3DSA:3.20.70.20 221 882 7.1E-247 T 23-10-2018 CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 SUPERFAMILY SSF51998 337 874 5.8E-182 T 23-10-2018 CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 264 874 4.7E-212 T 23-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 PRINTS PR01183 Ribonucleotide reductase large chain signature 584 607 9.9E-47 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 PRINTS PR01183 Ribonucleotide reductase large chain signature 413 432 9.9E-47 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 PRINTS PR01183 Ribonucleotide reductase large chain signature 547 558 9.9E-47 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 PRINTS PR01183 Ribonucleotide reductase large chain signature 622 644 9.9E-47 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 PRINTS PR01183 Ribonucleotide reductase large chain signature 650 673 9.9E-47 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG62_06430 92e5746eabe2f74376d52a2f5ba5a428 943 PRINTS PR01183 Ribonucleotide reductase large chain signature 727 754 9.9E-47 T 23-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG62_05470 31e9ffccbcae48dd5c6dfcb3bee5c53a 383 SUPERFAMILY SSF53383 11 376 3.34E-95 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_05470 31e9ffccbcae48dd5c6dfcb3bee5c53a 383 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 371 3.1E-84 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDG62_05470 31e9ffccbcae48dd5c6dfcb3bee5c53a 383 Gene3D G3DSA:3.90.1150.10 250 376 1.7E-26 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_05470 31e9ffccbcae48dd5c6dfcb3bee5c53a 383 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 2.6E-201 T 23-10-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 CDG62_05470 31e9ffccbcae48dd5c6dfcb3bee5c53a 383 Gene3D G3DSA:3.40.640.10 1 249 2.0E-77 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_05470 31e9ffccbcae48dd5c6dfcb3bee5c53a 383 PIRSF PIRSF000390 2 379 2.1E-108 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDG62_02640 035536e4fbc220e64db644d548c4872b 304 Gene3D G3DSA:3.40.190.10 166 267 1.1E-49 T 23-10-2018 CDG62_02640 035536e4fbc220e64db644d548c4872b 304 Pfam PF03466 LysR substrate binding domain 93 295 7.7E-31 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_02640 035536e4fbc220e64db644d548c4872b 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 6.3E-16 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_02640 035536e4fbc220e64db644d548c4872b 304 SUPERFAMILY SSF46785 6 115 2.59E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_02640 035536e4fbc220e64db644d548c4872b 304 Gene3D G3DSA:3.40.190.10 95 292 1.1E-49 T 23-10-2018 CDG62_02640 035536e4fbc220e64db644d548c4872b 304 SUPERFAMILY SSF53850 93 296 5.12E-33 T 23-10-2018 CDG62_02640 035536e4fbc220e64db644d548c4872b 304 Gene3D G3DSA:1.10.10.10 6 91 9.3E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_05015 9c5702390a2fa5067d27925ff24df750 86 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 2.0E-25 T 23-10-2018 IPR021250 Protein of unknown function DUF2789 CDG62_05015 9c5702390a2fa5067d27925ff24df750 86 Gene3D G3DSA:1.10.10.1130 1 78 8.0E-27 T 23-10-2018 CDG62_13310 48bf37a5997f111967d2ef45f45fc203 290 Gene3D G3DSA:3.40.800.20 3 286 1.6E-32 T 23-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CDG62_13310 48bf37a5997f111967d2ef45f45fc203 290 SUPERFAMILY SSF52768 5 277 1.34E-45 T 23-10-2018 IPR023696 Ureohydrolase domain superfamily CDG62_13310 48bf37a5997f111967d2ef45f45fc203 290 Pfam PF00850 Histone deacetylase domain 16 268 4.6E-25 T 23-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CDG62_13265 492175799825b1278d4239527aa33122 759 Gene3D G3DSA:3.40.50.10950 442 748 5.1E-92 T 23-10-2018 CDG62_13265 492175799825b1278d4239527aa33122 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 426 748 7.2E-93 T 23-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CDG62_13265 492175799825b1278d4239527aa33122 759 SUPERFAMILY SSF51735 164 448 3.26E-85 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_13265 492175799825b1278d4239527aa33122 759 PIRSF PIRSF036684 1 756 0.0 T 23-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 CDG62_13265 492175799825b1278d4239527aa33122 759 Gene3D G3DSA:3.40.50.10750 569 724 5.1E-92 T 23-10-2018 CDG62_13265 492175799825b1278d4239527aa33122 759 SMART SM00919 164 397 1.2E-126 T 23-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CDG62_13265 492175799825b1278d4239527aa33122 759 Pfam PF00390 Malic enzyme, N-terminal domain 115 152 2.2E-6 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CDG62_13265 492175799825b1278d4239527aa33122 759 Pfam PF00390 Malic enzyme, N-terminal domain 21 113 2.6E-20 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CDG62_13265 492175799825b1278d4239527aa33122 759 Gene3D G3DSA:3.40.50.720 162 441 1.3E-80 T 23-10-2018 CDG62_13265 492175799825b1278d4239527aa33122 759 Pfam PF03949 Malic enzyme, NAD binding domain 166 357 3.2E-22 T 23-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CDG62_13265 492175799825b1278d4239527aa33122 759 SMART SM01274 19 152 7.4E-81 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CDG62_13265 492175799825b1278d4239527aa33122 759 SUPERFAMILY SSF53659 426 751 3.37E-85 T 23-10-2018 CDG62_13265 492175799825b1278d4239527aa33122 759 SUPERFAMILY SSF53223 10 162 1.29E-52 T 23-10-2018 CDG62_13265 492175799825b1278d4239527aa33122 759 Gene3D G3DSA:3.40.50.10380 1 161 1.0E-69 T 23-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 CDG62_09015 03ee2d0bec11a5d46c7958962cd30a79 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 5 451 3.3E-114 T 23-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CDG62_09015 03ee2d0bec11a5d46c7958962cd30a79 451 Gene3D G3DSA:2.30.42.10 127 218 3.4E-22 T 23-10-2018 CDG62_09015 03ee2d0bec11a5d46c7958962cd30a79 451 SUPERFAMILY SSF50156 195 286 3.94E-15 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG62_09015 03ee2d0bec11a5d46c7958962cd30a79 451 Gene3D G3DSA:2.30.42.10 219 308 4.1E-15 T 23-10-2018 CDG62_09015 03ee2d0bec11a5d46c7958962cd30a79 451 Pfam PF13180 PDZ domain 127 194 1.3E-6 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG62_09015 03ee2d0bec11a5d46c7958962cd30a79 451 Pfam PF13180 PDZ domain 220 285 3.8E-7 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG62_09015 03ee2d0bec11a5d46c7958962cd30a79 451 SMART SM00228 116 187 0.19 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG62_09015 03ee2d0bec11a5d46c7958962cd30a79 451 SMART SM00228 209 278 2.5E-7 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG62_09015 03ee2d0bec11a5d46c7958962cd30a79 451 Pfam PF02163 Peptidase family M50 10 436 6.5E-78 T 23-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 CDG62_09015 03ee2d0bec11a5d46c7958962cd30a79 451 SUPERFAMILY SSF50156 89 196 2.1E-13 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG62_02270 93a74cf1834931f6fd92543efba31be3 184 SUPERFAMILY SSF69118 6 176 4.45E-46 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDG62_02270 93a74cf1834931f6fd92543efba31be3 184 Gene3D G3DSA:1.20.1290.10 14 178 1.1E-45 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDG62_02270 93a74cf1834931f6fd92543efba31be3 184 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 58 92 1.4E-10 T 23-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDG62_02270 93a74cf1834931f6fd92543efba31be3 184 Pfam PF02627 Carboxymuconolactone decarboxylase family 44 121 3.7E-8 T 23-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDG62_06100 60ee3526c5dd103875f6827760f6a858 131 SUPERFAMILY SSF54593 2 127 1.88E-25 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_06100 60ee3526c5dd103875f6827760f6a858 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 124 1.2E-13 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDG62_06100 60ee3526c5dd103875f6827760f6a858 131 Gene3D G3DSA:3.10.180.10 1 130 6.5E-44 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_18495 e01bd86851cb883f5675a90b378d2ecd 514 Gene3D G3DSA:1.20.150.20 384 514 1.3E-46 T 23-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18495 e01bd86851cb883f5675a90b378d2ecd 514 SUPERFAMILY SSF50615 11 95 1.57E-27 T 23-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_18495 e01bd86851cb883f5675a90b378d2ecd 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 512 5.5E-249 T 23-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18495 e01bd86851cb883f5675a90b378d2ecd 514 Gene3D G3DSA:3.40.50.300 95 383 2.1E-128 T 23-10-2018 CDG62_18495 e01bd86851cb883f5675a90b378d2ecd 514 Gene3D G3DSA:2.40.30.20 2 94 1.8E-31 T 23-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_18495 e01bd86851cb883f5675a90b378d2ecd 514 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 23-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_18495 e01bd86851cb883f5675a90b378d2ecd 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 3.0E-14 T 23-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_18495 e01bd86851cb883f5675a90b378d2ecd 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 49.596 T 23-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18495 e01bd86851cb883f5675a90b378d2ecd 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 2.9E-73 T 23-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_18495 e01bd86851cb883f5675a90b378d2ecd 514 SUPERFAMILY SSF47917 384 512 5.49E-46 T 23-10-2018 CDG62_18495 e01bd86851cb883f5675a90b378d2ecd 514 SUPERFAMILY SSF52540 97 382 1.43E-91 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_18495 e01bd86851cb883f5675a90b378d2ecd 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 9.8E-45 T 23-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_09475 5c578565e27a685348f13e9de189e090 160 Gene3D G3DSA:3.40.50.150 2 137 1.6E-9 T 23-10-2018 CDG62_09475 5c578565e27a685348f13e9de189e090 160 SUPERFAMILY SSF53335 3 154 2.09E-14 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 Gene3D G3DSA:3.40.50.620 37 581 0.0 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 SUPERFAMILY SSF50677 231 425 5.76E-49 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 226 416 3.9E-71 T 23-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 Pfam PF09334 tRNA synthetases class I (M) 40 176 2.0E-19 T 23-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 Gene3D G3DSA:1.10.730.10 13 805 0.0 T 23-10-2018 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 Pfam PF08264 Anticodon-binding domain of tRNA 717 836 6.9E-12 T 23-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 131 148 8.2E-49 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 500 518 8.2E-49 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 157 173 8.2E-49 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 189 202 8.2E-49 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 539 561 8.2E-49 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 572 582 8.2E-49 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 220 239 8.2E-49 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 Gene3D G3DSA:3.10.20.590 814 873 7.7E-20 T 23-10-2018 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 9 873 0.0 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 Gene3D G3DSA:3.10.330.110 582 644 0.0 T 23-10-2018 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 SUPERFAMILY SSF52374 9 684 3.9E-146 T 23-10-2018 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 Gene3D G3DSA:3.90.740.10 232 427 0.0 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 SUPERFAMILY SSF47323 678 873 7.48E-26 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 431 587 1.1E-7 T 23-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 634 674 5.6E-7 T 23-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_05240 76b2bb40b57bc6451cb14223a75a7b05 873 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 8 873 22.835 T 23-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 SUPERFAMILY SSF50447 466 564 8.71E-19 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 SUPERFAMILY SSF55186 565 727 9.42E-48 T 23-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 SUPERFAMILY SSF101353 254 475 1.96E-58 T 23-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 SUPERFAMILY SSF55681 2 253 1.02E-105 T 23-10-2018 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 Gene3D G3DSA:3.10.310.40 782 890 3.9E-26 T 23-10-2018 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 Gene3D G3DSA:3.30.54.20 636 695 1.9E-48 T 23-10-2018 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 SMART SM00863 665 714 2.3E-19 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 Pfam PF02272 DHHA1 domain 755 889 4.7E-23 T 23-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 318 331 2.2E-31 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 2.2E-31 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 2.2E-31 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 2.2E-31 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 PRINTS PR00980 Alanyl-tRNA synthetase signature 294 310 2.2E-31 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 Gene3D G3DSA:3.30.930.10 1 250 2.5E-119 T 23-10-2018 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 892 191.533 T 23-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 Gene3D G3DSA:3.30.980.10 574 715 1.9E-48 T 23-10-2018 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 Pfam PF01411 tRNA synthetases class II (A) 5 565 1.1E-218 T 23-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 Gene3D G3DSA:2.40.30.130 485 563 2.2E-10 T 23-10-2018 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 871 0.0 T 23-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CDG62_07965 d076a48b1ca2daef958260f75f39fda2 892 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 665 714 6.6E-17 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CDG62_16515 0972a1ce587cc251dd9b2d12e16a344a 264 Pfam PF01261 Xylose isomerase-like TIM barrel 21 210 4.6E-24 T 23-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CDG62_16515 0972a1ce587cc251dd9b2d12e16a344a 264 PIRSF PIRSF006241 1 261 4.1E-90 T 23-10-2018 IPR026040 Hydroxypyruvate isomerase-like CDG62_16515 0972a1ce587cc251dd9b2d12e16a344a 264 Gene3D G3DSA:3.20.20.150 1 260 6.2E-60 T 23-10-2018 CDG62_16515 0972a1ce587cc251dd9b2d12e16a344a 264 SUPERFAMILY SSF51658 1 258 4.15E-63 T 23-10-2018 IPR036237 Xylose isomerase-like superfamily CDG62_14725 601f19d0b9516f9e124e612f97d55073 552 Gene3D G3DSA:3.40.720.10 220 549 1.1E-88 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG62_14725 601f19d0b9516f9e124e612f97d55073 552 Pfam PF00884 Sulfatase 238 530 6.9E-54 T 23-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CDG62_14725 601f19d0b9516f9e124e612f97d55073 552 Pfam PF08019 Domain of unknown function (DUF1705) 59 208 7.9E-42 T 23-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 CDG62_14725 601f19d0b9516f9e124e612f97d55073 552 SUPERFAMILY SSF53649 238 532 4.14E-25 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG62_17130 40d9290760181f5d958e45293a6a2b2c 335 Pfam PF12833 Helix-turn-helix domain 255 332 5.3E-18 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_17130 40d9290760181f5d958e45293a6a2b2c 335 Gene3D G3DSA:1.10.10.60 228 335 9.1E-25 T 23-10-2018 CDG62_17130 40d9290760181f5d958e45293a6a2b2c 335 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 205 2.1E-34 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG62_17130 40d9290760181f5d958e45293a6a2b2c 335 SMART SM00342 248 330 8.3E-22 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_17130 40d9290760181f5d958e45293a6a2b2c 335 SUPERFAMILY SSF46689 283 332 2.46E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_16185 fa3da5e176e72b67cc0a66538caadc9f 83 Gene3D G3DSA:3.30.300.90 1 82 3.4E-26 T 23-10-2018 CDG62_16185 fa3da5e176e72b67cc0a66538caadc9f 83 Pfam PF01722 BolA-like protein 21 74 1.2E-12 T 23-10-2018 IPR002634 BolA protein CDG62_16185 fa3da5e176e72b67cc0a66538caadc9f 83 SUPERFAMILY SSF82657 2 78 7.46E-24 T 23-10-2018 IPR036065 BolA-like superfamily CDG62_16185 fa3da5e176e72b67cc0a66538caadc9f 83 PIRSF PIRSF003113 1 82 8.3E-21 T 23-10-2018 IPR002634 BolA protein CDG62_05125 a4b28c8329a67213ce80da1d3daaf70f 104 SUPERFAMILY SSF52821 14 103 2.88E-17 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG62_05125 a4b28c8329a67213ce80da1d3daaf70f 104 SMART SM00450 2 99 1.7E-10 T 23-10-2018 IPR001763 Rhodanese-like domain CDG62_05125 a4b28c8329a67213ce80da1d3daaf70f 104 Pfam PF00581 Rhodanese-like domain 16 91 1.2E-8 T 23-10-2018 IPR001763 Rhodanese-like domain CDG62_05125 a4b28c8329a67213ce80da1d3daaf70f 104 Gene3D G3DSA:3.40.250.10 11 104 2.6E-17 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG62_19050 3fb10b0f1e6e75ec9ca000f343c118b2 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 8.5E-11 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_19050 3fb10b0f1e6e75ec9ca000f343c118b2 212 Gene3D G3DSA:1.10.357.10 60 203 1.0E-44 T 23-10-2018 CDG62_19050 3fb10b0f1e6e75ec9ca000f343c118b2 212 SUPERFAMILY SSF48498 77 203 9.24E-35 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG62_19050 3fb10b0f1e6e75ec9ca000f343c118b2 212 Pfam PF08362 YcdC-like protein, C-terminal region 60 203 2.0E-51 T 23-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 CDG62_19050 3fb10b0f1e6e75ec9ca000f343c118b2 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.4E-6 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_19050 3fb10b0f1e6e75ec9ca000f343c118b2 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 3.4E-6 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_19050 3fb10b0f1e6e75ec9ca000f343c118b2 212 Gene3D G3DSA:1.10.10.60 1 59 1.8E-18 T 23-10-2018 CDG62_19050 3fb10b0f1e6e75ec9ca000f343c118b2 212 SUPERFAMILY SSF46689 4 79 3.18E-17 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_15900 04fc4211f37e4cc1049170c70894e682 1030 SMART SM00843 968 1030 1.1E-30 T 23-10-2018 IPR018541 FtsK gamma domain CDG62_15900 04fc4211f37e4cc1049170c70894e682 1030 Pfam PF01580 FtsK/SpoIIIE family 651 864 6.5E-65 T 23-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CDG62_15900 04fc4211f37e4cc1049170c70894e682 1030 Gene3D G3DSA:1.10.10.10 963 1029 9.0E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15900 04fc4211f37e4cc1049170c70894e682 1030 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 13 175 1.0E-28 T 23-10-2018 IPR025199 DNA translocase FtsK, 4TM region CDG62_15900 04fc4211f37e4cc1049170c70894e682 1030 SUPERFAMILY SSF46785 968 1030 5.44E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_15900 04fc4211f37e4cc1049170c70894e682 1030 SUPERFAMILY SSF52540 624 937 2.41E-46 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_15900 04fc4211f37e4cc1049170c70894e682 1030 Gene3D G3DSA:3.40.50.300 647 950 9.0E-111 T 23-10-2018 CDG62_15900 04fc4211f37e4cc1049170c70894e682 1030 Pfam PF09397 Ftsk gamma domain 971 1030 3.9E-26 T 23-10-2018 IPR018541 FtsK gamma domain CDG62_15900 04fc4211f37e4cc1049170c70894e682 1030 Gene3D G3DSA:3.30.980.40 541 646 2.5E-32 T 23-10-2018 CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 Gene3D G3DSA:1.20.200.10 106 361 1.9E-97 T 23-10-2018 CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 3.6E-8 T 23-10-2018 CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 PRINTS PR00145 Argininosuccinate lyase family signature 231 255 3.6E-8 T 23-10-2018 CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 PRINTS PR00145 Argininosuccinate lyase family signature 141 161 3.6E-8 T 23-10-2018 CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 SUPERFAMILY SSF48557 4 444 2.67E-115 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 Gene3D G3DSA:1.10.40.30 363 443 5.7E-31 T 23-10-2018 CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 4 349 3.0E-113 T 23-10-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 Pfam PF00206 Lyase 14 299 3.1E-48 T 23-10-2018 IPR022761 Fumarate lyase, N-terminal CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 Pfam PF10397 Adenylosuccinate lyase C-terminus 365 442 1.6E-18 T 23-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 1.5E-21 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 PRINTS PR00149 Fumarate lyase superfamily signature 101 119 1.5E-21 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 PRINTS PR00149 Fumarate lyase superfamily signature 231 258 1.5E-21 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 PRINTS PR00149 Fumarate lyase superfamily signature 146 164 1.5E-21 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 23-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 SMART SM00998 364 443 1.5E-28 T 23-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG62_15145 1a6a3a5a5064ddba10c6c686782bece0 451 Gene3D G3DSA:1.10.275.10 7 105 2.3E-34 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal CDG62_06635 367516918eee073dee3750d17cff3b99 232 SUPERFAMILY SSF89392 40 232 1.45E-44 T 23-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDG62_06635 367516918eee073dee3750d17cff3b99 232 Gene3D G3DSA:2.50.20.10 35 232 5.5E-51 T 23-10-2018 CDG62_06635 367516918eee073dee3750d17cff3b99 232 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 20 232 28.441 T 23-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CDG62_06635 367516918eee073dee3750d17cff3b99 232 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 78 222 2.8E-38 T 23-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CDG62_06635 367516918eee073dee3750d17cff3b99 232 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 37 232 5.8E-24 T 23-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CDG62_17960 6b70cf503981c60540b7c85ffa73f9ad 177 SMART SM00739 122 149 0.0039 T 23-10-2018 IPR005824 KOW CDG62_17960 6b70cf503981c60540b7c85ffa73f9ad 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 176 22.591 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDG62_17960 6b70cf503981c60540b7c85ffa73f9ad 177 SUPERFAMILY SSF50104 120 175 9.03E-15 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily CDG62_17960 6b70cf503981c60540b7c85ffa73f9ad 177 Pfam PF02357 Transcription termination factor nusG 2 107 3.9E-28 T 23-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CDG62_17960 6b70cf503981c60540b7c85ffa73f9ad 177 Gene3D G3DSA:2.30.30.30 118 175 3.6E-19 T 23-10-2018 IPR014722 Ribosomal protein L2, domain 2 CDG62_17960 6b70cf503981c60540b7c85ffa73f9ad 177 SMART SM00738 1 110 3.7E-44 T 23-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CDG62_17960 6b70cf503981c60540b7c85ffa73f9ad 177 Gene3D G3DSA:3.30.70.940 1 117 3.9E-46 T 23-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CDG62_17960 6b70cf503981c60540b7c85ffa73f9ad 177 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 3.6E-15 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDG62_17960 6b70cf503981c60540b7c85ffa73f9ad 177 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 3.6E-15 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDG62_17960 6b70cf503981c60540b7c85ffa73f9ad 177 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 3.6E-15 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDG62_17960 6b70cf503981c60540b7c85ffa73f9ad 177 SUPERFAMILY SSF82679 1 112 6.8E-38 T 23-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CDG62_17960 6b70cf503981c60540b7c85ffa73f9ad 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 175 3.6E-62 T 23-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CDG62_12180 8f91d8597b2a9e436bb814b93ff7fec2 171 Pfam PF02417 Chromate transporter 5 167 7.2E-33 T 23-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CDG62_06515 d08b00622bb0ceddabf95ef003f19087 211 Pfam PF14681 Uracil phosphoribosyltransferase 7 206 2.4E-63 T 23-10-2018 CDG62_06515 d08b00622bb0ceddabf95ef003f19087 211 SUPERFAMILY SSF53271 3 206 1.57E-65 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG62_06515 d08b00622bb0ceddabf95ef003f19087 211 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 42.545 T 23-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CDG62_06515 d08b00622bb0ceddabf95ef003f19087 211 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 1.2E-84 T 23-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CDG62_06515 d08b00622bb0ceddabf95ef003f19087 211 Gene3D G3DSA:3.40.50.2020 1 207 4.7E-70 T 23-10-2018 CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 184 3.9E-12 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 SUPERFAMILY SSF54211 245 502 9.86E-94 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 SMART SM00387 29 186 5.6E-4 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 SUPERFAMILY SSF110942 528 638 6.93E-33 T 23-10-2018 IPR037196 HSP90, C-terminal domain CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 PIRSF PIRSF002583 1 639 5.7E-214 T 23-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 Gene3D G3DSA:1.20.120.790 509 639 6.4E-41 T 23-10-2018 IPR037196 HSP90, C-terminal domain CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 PRINTS PR00775 90kDa heat shock protein signature 95 112 2.2E-61 T 23-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 PRINTS PR00775 90kDa heat shock protein signature 174 191 2.2E-61 T 23-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 PRINTS PR00775 90kDa heat shock protein signature 192 210 2.2E-61 T 23-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 PRINTS PR00775 90kDa heat shock protein signature 7 27 2.2E-61 T 23-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 PRINTS PR00775 90kDa heat shock protein signature 122 144 2.2E-61 T 23-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 PRINTS PR00775 90kDa heat shock protein signature 28 50 2.2E-61 T 23-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 PRINTS PR00775 90kDa heat shock protein signature 77 94 2.2E-61 T 23-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 SUPERFAMILY SSF55874 8 217 3.35E-64 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 638 31.045 T 23-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 Gene3D G3DSA:3.30.565.10 1 229 5.9E-77 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 Gene3D G3DSA:3.40.50.11260 416 503 7.5E-32 T 23-10-2018 CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 Pfam PF00183 Hsp90 protein 227 637 4.1E-125 T 23-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 CDG62_17885 ed61fb79b4c1f3817ee7ca686a7f92db 639 Gene3D G3DSA:3.30.230.80 244 415 7.8E-66 T 23-10-2018 CDG62_10725 06d808426278a01cb196719a22fba9a2 380 SUPERFAMILY SSF47819 198 279 1.87E-18 T 23-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 CDG62_10725 06d808426278a01cb196719a22fba9a2 380 Pfam PF01612 3'-5' exonuclease 3 168 4.6E-24 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CDG62_10725 06d808426278a01cb196719a22fba9a2 380 Gene3D G3DSA:3.30.420.10 1 190 1.5E-47 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_10725 06d808426278a01cb196719a22fba9a2 380 Gene3D G3DSA:1.10.150.80 198 287 4.6E-14 T 23-10-2018 CDG62_10725 06d808426278a01cb196719a22fba9a2 380 SUPERFAMILY SSF53098 3 206 4.93E-49 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_10725 06d808426278a01cb196719a22fba9a2 380 Gene3D G3DSA:1.10.150.80 296 369 4.9E-10 T 23-10-2018 CDG62_10725 06d808426278a01cb196719a22fba9a2 380 SUPERFAMILY SSF47819 292 366 1.0E-16 T 23-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 CDG62_10725 06d808426278a01cb196719a22fba9a2 380 Pfam PF00570 HRDC domain 210 277 4.9E-14 T 23-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CDG62_10725 06d808426278a01cb196719a22fba9a2 380 SMART SM00474 2 169 8.6E-24 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CDG62_14740 a545ce882c79feeb1f939e94ee82349a 209 SUPERFAMILY SSF69593 20 153 1.22E-13 T 23-10-2018 CDG62_14740 a545ce882c79feeb1f939e94ee82349a 209 SMART SM00563 47 159 1.4E-12 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_14740 a545ce882c79feeb1f939e94ee82349a 209 Pfam PF01553 Acyltransferase 47 152 9.6E-8 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_04190 88be57dc7181dddea5e94ec7afed2baf 175 Pfam PF04351 Pilus assembly protein, PilP 29 170 1.7E-42 T 23-10-2018 IPR007446 Pilus assembly protein PilP CDG62_04190 88be57dc7181dddea5e94ec7afed2baf 175 PIRSF PIRSF016481 1 172 3.4E-36 T 23-10-2018 IPR007446 Pilus assembly protein PilP CDG62_04190 88be57dc7181dddea5e94ec7afed2baf 175 Gene3D G3DSA:2.30.30.830 77 171 4.7E-28 T 23-10-2018 CDG62_18525 8580e0fcb0f13c59e7221125393a5afc 279 Gene3D G3DSA:3.40.50.1980 173 276 6.6E-9 T 23-10-2018 CDG62_18525 8580e0fcb0f13c59e7221125393a5afc 279 SUPERFAMILY SSF53807 22 273 3.88E-39 T 23-10-2018 CDG62_18525 8580e0fcb0f13c59e7221125393a5afc 279 Gene3D G3DSA:3.40.50.1980 22 172 3.2E-20 T 23-10-2018 CDG62_18525 8580e0fcb0f13c59e7221125393a5afc 279 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 216 1.3E-20 T 23-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CDG62_11865 c953404420253681926da59c3090dbc4 400 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 10 400 6.5E-148 T 23-10-2018 IPR023922 Sulphate-starvation-induced SfnB CDG62_11865 c953404420253681926da59c3090dbc4 400 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 34 121 3.6E-7 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG62_11865 c953404420253681926da59c3090dbc4 400 Gene3D G3DSA:2.40.110.10 125 224 9.4E-24 T 23-10-2018 CDG62_11865 c953404420253681926da59c3090dbc4 400 PIRSF PIRSF016578 2 391 1.4E-22 T 23-10-2018 CDG62_11865 c953404420253681926da59c3090dbc4 400 Gene3D G3DSA:1.20.140.10 225 398 4.6E-45 T 23-10-2018 CDG62_11865 c953404420253681926da59c3090dbc4 400 SUPERFAMILY SSF47203 238 398 4.51E-17 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_11865 c953404420253681926da59c3090dbc4 400 SUPERFAMILY SSF56645 25 223 2.88E-34 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_11865 c953404420253681926da59c3090dbc4 400 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 242 374 4.5E-14 T 23-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CDG62_11865 c953404420253681926da59c3090dbc4 400 Gene3D G3DSA:1.10.540.10 16 122 9.6E-17 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG62_02890 d7f8a0a7b8ecfb6296cacb810dbca4b5 382 SUPERFAMILY SSF55979 131 260 1.81E-20 T 23-10-2018 CDG62_02890 d7f8a0a7b8ecfb6296cacb810dbca4b5 382 SMART SM00480 17 378 1.8E-115 T 23-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CDG62_02890 d7f8a0a7b8ecfb6296cacb810dbca4b5 382 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 2 381 6.6E-94 T 23-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CDG62_02890 d7f8a0a7b8ecfb6296cacb810dbca4b5 382 Pfam PF02767 DNA polymerase III beta subunit, central domain 134 259 3.3E-29 T 23-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 CDG62_02890 d7f8a0a7b8ecfb6296cacb810dbca4b5 382 Gene3D G3DSA:3.10.150.10 1 126 2.3E-35 T 23-10-2018 CDG62_02890 d7f8a0a7b8ecfb6296cacb810dbca4b5 382 Gene3D G3DSA:3.10.150.10 129 263 1.2E-30 T 23-10-2018 CDG62_02890 d7f8a0a7b8ecfb6296cacb810dbca4b5 382 Gene3D G3DSA:3.10.150.10 264 382 4.3E-35 T 23-10-2018 CDG62_02890 d7f8a0a7b8ecfb6296cacb810dbca4b5 382 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 3 122 1.7E-31 T 23-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 CDG62_02890 d7f8a0a7b8ecfb6296cacb810dbca4b5 382 PIRSF PIRSF000804 1 382 2.4E-105 T 23-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 CDG62_02890 d7f8a0a7b8ecfb6296cacb810dbca4b5 382 SUPERFAMILY SSF55979 261 382 1.54E-33 T 23-10-2018 CDG62_02890 d7f8a0a7b8ecfb6296cacb810dbca4b5 382 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 261 381 5.7E-34 T 23-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 CDG62_02890 d7f8a0a7b8ecfb6296cacb810dbca4b5 382 SUPERFAMILY SSF55979 3 120 1.57E-23 T 23-10-2018 CDG62_10240 67e6e2ca2b03041f5f63ea663fa83f2d 226 SUPERFAMILY SSF51366 2 224 4.4E-70 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG62_10240 67e6e2ca2b03041f5f63ea663fa83f2d 226 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 4 222 1.7E-59 T 23-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_10240 67e6e2ca2b03041f5f63ea663fa83f2d 226 SMART SM00934 2 222 3.9E-91 T 23-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_10240 67e6e2ca2b03041f5f63ea663fa83f2d 226 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 2 221 5.9E-46 T 23-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_10240 67e6e2ca2b03041f5f63ea663fa83f2d 226 Gene3D G3DSA:3.20.20.70 1 225 5.0E-79 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_10240 67e6e2ca2b03041f5f63ea663fa83f2d 226 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 1 226 34.296 T 23-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_10240 67e6e2ca2b03041f5f63ea663fa83f2d 226 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 54 67 - T 23-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_01825 05389f29e3a25048256efde8c2757bd8 115 Gene3D G3DSA:1.10.3730.20 1 106 2.0E-34 T 23-10-2018 CDG62_01825 05389f29e3a25048256efde8c2757bd8 115 Pfam PF00893 Small Multidrug Resistance protein 3 94 7.1E-32 T 23-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CDG62_01825 05389f29e3a25048256efde8c2757bd8 115 SUPERFAMILY SSF103481 5 107 1.44E-19 T 23-10-2018 CDG62_09135 d2d5c4c9eecb828171e8ffb8ccb815f9 674 SUPERFAMILY SSF51905 374 608 1.29E-38 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_09135 d2d5c4c9eecb828171e8ffb8ccb815f9 674 Gene3D G3DSA:3.50.50.60 473 627 5.0E-114 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_09135 d2d5c4c9eecb828171e8ffb8ccb815f9 674 Gene3D G3DSA:3.20.20.70 3 369 7.5E-121 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_09135 d2d5c4c9eecb828171e8ffb8ccb815f9 674 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 4.8E-86 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDG62_09135 d2d5c4c9eecb828171e8ffb8ccb815f9 674 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 640 1.2E-25 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_09135 d2d5c4c9eecb828171e8ffb8ccb815f9 674 Gene3D G3DSA:3.40.50.720 376 667 5.0E-114 T 23-10-2018 CDG62_09135 d2d5c4c9eecb828171e8ffb8ccb815f9 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 497 521 1.2E-7 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_09135 d2d5c4c9eecb828171e8ffb8ccb815f9 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 377 399 1.2E-7 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_09135 d2d5c4c9eecb828171e8ffb8ccb815f9 674 SUPERFAMILY SSF51395 2 367 5.36E-107 T 23-10-2018 CDG62_09135 d2d5c4c9eecb828171e8ffb8ccb815f9 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 2.9E-17 T 23-10-2018 CDG62_09135 d2d5c4c9eecb828171e8ffb8ccb815f9 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 461 479 2.9E-17 T 23-10-2018 CDG62_09135 d2d5c4c9eecb828171e8ffb8ccb815f9 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 501 519 2.9E-17 T 23-10-2018 CDG62_09135 d2d5c4c9eecb828171e8ffb8ccb815f9 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 620 636 2.9E-17 T 23-10-2018 CDG62_06935 8a1965c7d9db88519777a11f499ccfce 940 Gene3D G3DSA:3.40.50.970 165 525 5.5E-147 T 23-10-2018 CDG62_06935 8a1965c7d9db88519777a11f499ccfce 940 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 935 0.0 T 23-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CDG62_06935 8a1965c7d9db88519777a11f499ccfce 940 SUPERFAMILY SSF52518 576 792 1.08E-48 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG62_06935 8a1965c7d9db88519777a11f499ccfce 940 SUPERFAMILY SSF52518 118 547 4.56E-87 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG62_06935 8a1965c7d9db88519777a11f499ccfce 940 Pfam PF00676 Dehydrogenase E1 component 210 515 1.6E-50 T 23-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 CDG62_06935 8a1965c7d9db88519777a11f499ccfce 940 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 14 50 2.5E-14 T 23-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CDG62_06935 8a1965c7d9db88519777a11f499ccfce 940 Pfam PF02779 Transketolase, pyrimidine binding domain 593 787 1.6E-62 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDG62_06935 8a1965c7d9db88519777a11f499ccfce 940 Gene3D G3DSA:1.10.287.1150 82 164 2.5E-25 T 23-10-2018 CDG62_06935 8a1965c7d9db88519777a11f499ccfce 940 Gene3D G3DSA:3.40.50.11610 723 932 5.7E-165 T 23-10-2018 CDG62_06935 8a1965c7d9db88519777a11f499ccfce 940 PIRSF PIRSF000157 1 937 0.0 T 23-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CDG62_06935 8a1965c7d9db88519777a11f499ccfce 940 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 935 2.2E-50 T 23-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CDG62_06935 8a1965c7d9db88519777a11f499ccfce 940 Gene3D G3DSA:3.40.50.12470 556 802 5.7E-165 T 23-10-2018 CDG62_06935 8a1965c7d9db88519777a11f499ccfce 940 SMART SM00861 593 786 9.0E-60 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDG62_13500 4a27b825a81551dc0e8cbb511f4aff0a 221 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 70 1.3E-6 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG62_13500 4a27b825a81551dc0e8cbb511f4aff0a 221 SUPERFAMILY SSF47616 107 216 3.76E-16 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG62_13500 4a27b825a81551dc0e8cbb511f4aff0a 221 Gene3D G3DSA:3.40.30.10 1 72 5.2E-16 T 23-10-2018 CDG62_13500 4a27b825a81551dc0e8cbb511f4aff0a 221 SUPERFAMILY SSF52833 1 69 9.26E-10 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_13500 4a27b825a81551dc0e8cbb511f4aff0a 221 Gene3D G3DSA:1.20.1050.10 76 203 4.0E-16 T 23-10-2018 CDG62_13500 4a27b825a81551dc0e8cbb511f4aff0a 221 Pfam PF00043 Glutathione S-transferase, C-terminal domain 130 197 7.5E-8 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal CDG62_17835 7b061599fd02c9b5274854567c63c9a0 290 Pfam PF03848 Tellurite resistance protein TehB 90 283 4.8E-74 T 23-10-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain CDG62_17835 7b061599fd02c9b5274854567c63c9a0 290 PIRSF PIRSF005215 1 288 5.0E-117 T 23-10-2018 IPR014431 Tellurite resistance methyltransferase, TehB type-2 CDG62_17835 7b061599fd02c9b5274854567c63c9a0 290 Pfam PF09313 Domain of unknown function (DUF1971) 8 88 9.6E-30 T 23-10-2018 IPR015392 Domain of unknown function DUF1971 CDG62_17835 7b061599fd02c9b5274854567c63c9a0 290 Gene3D G3DSA:2.60.120.10 1 106 1.5E-41 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG62_17835 7b061599fd02c9b5274854567c63c9a0 290 SUPERFAMILY SSF51197 1 101 3.02E-36 T 23-10-2018 CDG62_17835 7b061599fd02c9b5274854567c63c9a0 290 SUPERFAMILY SSF53335 67 275 1.48E-27 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_17835 7b061599fd02c9b5274854567c63c9a0 290 Gene3D G3DSA:3.40.50.150 107 287 5.8E-39 T 23-10-2018 CDG62_17835 7b061599fd02c9b5274854567c63c9a0 290 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 48 285 2.0E-85 T 23-10-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 CDG62_17175 1ec75f45b8e3fadcabf122e7c27d40fc 285 Gene3D G3DSA:3.40.190.290 92 285 2.6E-39 T 23-10-2018 CDG62_17175 1ec75f45b8e3fadcabf122e7c27d40fc 285 Pfam PF03466 LysR substrate binding domain 89 284 1.7E-42 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_17175 1ec75f45b8e3fadcabf122e7c27d40fc 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_17175 1ec75f45b8e3fadcabf122e7c27d40fc 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_17175 1ec75f45b8e3fadcabf122e7c27d40fc 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_17175 1ec75f45b8e3fadcabf122e7c27d40fc 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 4.3E-19 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_17175 1ec75f45b8e3fadcabf122e7c27d40fc 285 Gene3D G3DSA:1.10.10.10 1 91 5.1E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_17175 1ec75f45b8e3fadcabf122e7c27d40fc 285 SUPERFAMILY SSF46785 1 111 5.99E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_17175 1ec75f45b8e3fadcabf122e7c27d40fc 285 SUPERFAMILY SSF53850 89 284 8.33E-41 T 23-10-2018 CDG62_08455 48281911b37c0179d65a2f60187e7108 215 Gene3D G3DSA:3.90.1140.10 38 210 1.7E-7 T 23-10-2018 CDG62_08455 48281911b37c0179d65a2f60187e7108 215 SUPERFAMILY SSF55144 43 170 1.27E-8 T 23-10-2018 IPR009097 Cyclic phosphodiesterase CDG62_08455 48281911b37c0179d65a2f60187e7108 215 Pfam PF13563 2'-5' RNA ligase superfamily 47 175 1.3E-9 T 23-10-2018 CDG62_15880 53cba1ef634af5fed599d682b895505d 270 SUPERFAMILY SSF52540 2 268 2.51E-53 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_15880 53cba1ef634af5fed599d682b895505d 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.3E-105 T 23-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 CDG62_15880 53cba1ef634af5fed599d682b895505d 270 Pfam PF13614 AAA domain 3 165 1.3E-21 T 23-10-2018 IPR025669 AAA domain CDG62_15880 53cba1ef634af5fed599d682b895505d 270 PIRSF PIRSF003092 1 270 2.1E-89 T 23-10-2018 IPR025501 ATP binding protein MinD CDG62_15880 53cba1ef634af5fed599d682b895505d 270 Gene3D G3DSA:3.40.50.300 1 259 1.3E-70 T 23-10-2018 CDG62_15810 bb69a660219ef635085bad1968cf622f 145 SUPERFAMILY SSF46785 6 134 1.03E-43 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_15810 bb69a660219ef635085bad1968cf622f 145 Gene3D G3DSA:1.10.10.10 2 84 1.1E-35 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15810 bb69a660219ef635085bad1968cf622f 145 Gene3D G3DSA:3.30.1490.190 85 141 1.8E-22 T 23-10-2018 CDG62_15810 bb69a660219ef635085bad1968cf622f 145 Pfam PF01475 Ferric uptake regulator family 10 130 9.2E-45 T 23-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CDG62_10520 a27eb3c892fdad9a2370acc5eb8bc3f7 572 Gene3D G3DSA:2.40.240.10 371 485 5.6E-79 T 23-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG62_10520 a27eb3c892fdad9a2370acc5eb8bc3f7 572 SUPERFAMILY SSF50715 363 568 8.89E-70 T 23-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG62_10520 a27eb3c892fdad9a2370acc5eb8bc3f7 572 Gene3D G3DSA:3.40.50.620 51 270 5.4E-102 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_10520 a27eb3c892fdad9a2370acc5eb8bc3f7 572 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 51 569 2.2E-230 T 23-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG62_10520 a27eb3c892fdad9a2370acc5eb8bc3f7 572 Gene3D G3DSA:3.90.800.10 124 232 5.4E-102 T 23-10-2018 CDG62_10520 a27eb3c892fdad9a2370acc5eb8bc3f7 572 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 23 569 50.504 T 23-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 CDG62_10520 a27eb3c892fdad9a2370acc5eb8bc3f7 572 Gene3D G3DSA:1.10.1160.10 284 362 9.4E-33 T 23-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 CDG62_10520 a27eb3c892fdad9a2370acc5eb8bc3f7 572 SUPERFAMILY SSF52374 50 369 7.11E-96 T 23-10-2018 CDG62_10520 a27eb3c892fdad9a2370acc5eb8bc3f7 572 PRINTS PR00987 Glutamyl-tRNA synthetase signature 54 66 4.4E-7 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG62_10520 a27eb3c892fdad9a2370acc5eb8bc3f7 572 PRINTS PR00987 Glutamyl-tRNA synthetase signature 83 96 4.4E-7 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG62_10520 a27eb3c892fdad9a2370acc5eb8bc3f7 572 PRINTS PR00987 Glutamyl-tRNA synthetase signature 233 243 4.4E-7 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG62_10520 a27eb3c892fdad9a2370acc5eb8bc3f7 572 Gene3D G3DSA:2.40.240.10 363 566 5.6E-79 T 23-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG62_10520 a27eb3c892fdad9a2370acc5eb8bc3f7 572 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 50 360 1.1E-107 T 23-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CDG62_10520 a27eb3c892fdad9a2370acc5eb8bc3f7 572 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 363 548 2.7E-57 T 23-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG62_14010 6660b5b4fd2bfbe420b2e25aefa18ba0 505 Gene3D G3DSA:3.50.50.60 9 368 5.1E-125 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14010 6660b5b4fd2bfbe420b2e25aefa18ba0 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 315 321 1.3E-25 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG62_14010 6660b5b4fd2bfbe420b2e25aefa18ba0 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 8 20 1.3E-25 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG62_14010 6660b5b4fd2bfbe420b2e25aefa18ba0 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 82 94 1.3E-25 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG62_14010 6660b5b4fd2bfbe420b2e25aefa18ba0 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 21 31 1.3E-25 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG62_14010 6660b5b4fd2bfbe420b2e25aefa18ba0 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 350 362 1.3E-25 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG62_14010 6660b5b4fd2bfbe420b2e25aefa18ba0 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 37 49 1.3E-25 T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG62_14010 6660b5b4fd2bfbe420b2e25aefa18ba0 505 Gene3D G3DSA:3.30.9.10 86 322 5.1E-125 T 23-10-2018 CDG62_14010 6660b5b4fd2bfbe420b2e25aefa18ba0 505 Gene3D G3DSA:1.10.8.870 396 463 1.6E-18 T 23-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG62_14010 6660b5b4fd2bfbe420b2e25aefa18ba0 505 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 355 365 - T 23-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG62_14010 6660b5b4fd2bfbe420b2e25aefa18ba0 505 Pfam PF01266 FAD dependent oxidoreductase 9 340 2.9E-43 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDG62_14010 6660b5b4fd2bfbe420b2e25aefa18ba0 505 SUPERFAMILY SSF51905 8 225 1.92E-30 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14010 6660b5b4fd2bfbe420b2e25aefa18ba0 505 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 384 479 1.0E-12 T 23-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 CDG62_13225 f9c8e33e22b6de4d2d34cba1fdd407e5 112 Pfam PF11804 Protein of unknown function (DUF3325) 8 102 7.1E-20 T 23-10-2018 IPR021762 Protein of unknown function DUF3325 CDG62_05130 195fbd528b88c0b72ab8764c57b3b049 635 SUPERFAMILY SSF51971 273 603 4.77E-19 T 23-10-2018 CDG62_05130 195fbd528b88c0b72ab8764c57b3b049 635 Pfam PF01266 FAD dependent oxidoreductase 276 598 7.2E-26 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDG62_05130 195fbd528b88c0b72ab8764c57b3b049 635 Gene3D G3DSA:3.40.50.150 8 250 1.6E-86 T 23-10-2018 CDG62_05130 195fbd528b88c0b72ab8764c57b3b049 635 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 117 239 1.3E-33 T 23-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 CDG62_05130 195fbd528b88c0b72ab8764c57b3b049 635 Gene3D G3DSA:3.30.9.10 353 559 1.8E-78 T 23-10-2018 CDG62_05130 195fbd528b88c0b72ab8764c57b3b049 635 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 6 623 21.336 T 23-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 CDG62_05130 195fbd528b88c0b72ab8764c57b3b049 635 Gene3D G3DSA:3.50.50.60 276 621 1.8E-78 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_05130 195fbd528b88c0b72ab8764c57b3b049 635 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 275 571 1.9E-60 T 23-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 CDG62_05130 195fbd528b88c0b72ab8764c57b3b049 635 SUPERFAMILY SSF54373 468 551 3.14E-5 T 23-10-2018 CDG62_16310 c2a961d416fb7c7e0eca005996331b3e 276 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 9 267 7.4E-76 T 23-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDG62_16310 c2a961d416fb7c7e0eca005996331b3e 276 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 9 100 1.0E-20 T 23-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CDG62_16310 c2a961d416fb7c7e0eca005996331b3e 276 Gene3D G3DSA:3.40.50.720 3 164 1.8E-46 T 23-10-2018 CDG62_16310 c2a961d416fb7c7e0eca005996331b3e 276 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 245 - T 23-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDG62_16310 c2a961d416fb7c7e0eca005996331b3e 276 SUPERFAMILY SSF51735 7 160 6.33E-36 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_16310 c2a961d416fb7c7e0eca005996331b3e 276 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 7 267 26.415 T 23-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDG62_16310 c2a961d416fb7c7e0eca005996331b3e 276 Gene3D G3DSA:1.10.3730.10 165 272 1.1E-40 T 23-10-2018 CDG62_16310 c2a961d416fb7c7e0eca005996331b3e 276 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 267 3.4E-35 T 23-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDG62_16310 c2a961d416fb7c7e0eca005996331b3e 276 PIRSF PIRSF000193 6 270 1.5E-74 T 23-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CDG62_16310 c2a961d416fb7c7e0eca005996331b3e 276 SUPERFAMILY SSF48179 162 270 4.25E-34 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_12240 64f3497b004f3bf5a0177765feb5915d 395 Pfam PF13533 Biotin-lipoyl like 63 99 2.5E-8 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDG62_12240 64f3497b004f3bf5a0177765feb5915d 395 Gene3D G3DSA:2.40.30.170 49 373 1.3E-25 T 23-10-2018 CDG62_12240 64f3497b004f3bf5a0177765feb5915d 395 SUPERFAMILY SSF111369 65 124 8.37E-7 T 23-10-2018 CDG62_12240 64f3497b004f3bf5a0177765feb5915d 395 ProSitePatterns PS00543 HlyD family secretion proteins signature. 360 382 - T 23-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 CDG62_12240 64f3497b004f3bf5a0177765feb5915d 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 375 395 1.1E-37 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG62_12240 64f3497b004f3bf5a0177765feb5915d 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 73 93 1.1E-37 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG62_12240 64f3497b004f3bf5a0177765feb5915d 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 290 314 1.1E-37 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG62_12240 64f3497b004f3bf5a0177765feb5915d 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 31 54 1.1E-37 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG62_12240 64f3497b004f3bf5a0177765feb5915d 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 360 375 1.1E-37 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG62_12240 64f3497b004f3bf5a0177765feb5915d 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 337 1.1E-37 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG62_12240 64f3497b004f3bf5a0177765feb5915d 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 257 278 1.1E-37 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG62_12240 64f3497b004f3bf5a0177765feb5915d 395 Gene3D G3DSA:2.40.50.100 61 281 1.3E-25 T 23-10-2018 CDG62_12240 64f3497b004f3bf5a0177765feb5915d 395 Gene3D G3DSA:1.10.287.470 95 244 1.3E-25 T 23-10-2018 CDG62_12240 64f3497b004f3bf5a0177765feb5915d 395 Pfam PF13437 HlyD family secretion protein 245 359 4.1E-16 T 23-10-2018 CDG62_18420 3f2846771e4fd7d2eee1fbc4b1851cde 176 Gene3D G3DSA:3.90.45.10 1 168 7.9E-66 T 23-10-2018 IPR036821 Peptide deformylase superfamily CDG62_18420 3f2846771e4fd7d2eee1fbc4b1851cde 176 SUPERFAMILY SSF56420 2 165 3.4E-62 T 23-10-2018 IPR036821 Peptide deformylase superfamily CDG62_18420 3f2846771e4fd7d2eee1fbc4b1851cde 176 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 161 9.5E-58 T 23-10-2018 IPR023635 Peptide deformylase CDG62_18420 3f2846771e4fd7d2eee1fbc4b1851cde 176 Pfam PF01327 Polypeptide deformylase 5 153 2.7E-52 T 23-10-2018 IPR023635 Peptide deformylase CDG62_18420 3f2846771e4fd7d2eee1fbc4b1851cde 176 PRINTS PR01576 Peptide deformylase signature 33 62 4.8E-37 T 23-10-2018 IPR023635 Peptide deformylase CDG62_18420 3f2846771e4fd7d2eee1fbc4b1851cde 176 PRINTS PR01576 Peptide deformylase signature 102 120 4.8E-37 T 23-10-2018 IPR023635 Peptide deformylase CDG62_18420 3f2846771e4fd7d2eee1fbc4b1851cde 176 PRINTS PR01576 Peptide deformylase signature 121 150 4.8E-37 T 23-10-2018 IPR023635 Peptide deformylase CDG62_18420 3f2846771e4fd7d2eee1fbc4b1851cde 176 PRINTS PR01576 Peptide deformylase signature 90 101 4.8E-37 T 23-10-2018 IPR023635 Peptide deformylase CDG62_18420 3f2846771e4fd7d2eee1fbc4b1851cde 176 Hamap MF_00163 Peptide deformylase [def]. 2 163 31.206 T 23-10-2018 IPR023635 Peptide deformylase CDG62_18420 3f2846771e4fd7d2eee1fbc4b1851cde 176 PIRSF PIRSF004749 1 175 8.8E-58 T 23-10-2018 IPR023635 Peptide deformylase CDG62_15435 bd9d496e18dd2b16374bc676b182ab05 303 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 10 301 43.463 T 23-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 CDG62_15435 bd9d496e18dd2b16374bc676b182ab05 303 PIRSF PIRSF001365 6 303 1.4E-59 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG62_15435 bd9d496e18dd2b16374bc676b182ab05 303 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 4 298 1.8E-125 T 23-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 CDG62_15435 bd9d496e18dd2b16374bc676b182ab05 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 80 98 3.4E-6 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG62_15435 bd9d496e18dd2b16374bc676b182ab05 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 111 127 3.4E-6 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG62_15435 bd9d496e18dd2b16374bc676b182ab05 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 44 65 3.4E-6 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG62_15435 bd9d496e18dd2b16374bc676b182ab05 303 SMART SM01130 10 301 1.0E-74 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG62_15435 bd9d496e18dd2b16374bc676b182ab05 303 Pfam PF00701 Dihydrodipicolinate synthetase family 12 298 7.7E-55 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG62_15435 bd9d496e18dd2b16374bc676b182ab05 303 SUPERFAMILY SSF51569 12 300 1.36E-67 T 23-10-2018 CDG62_15435 bd9d496e18dd2b16374bc676b182ab05 303 Gene3D G3DSA:3.20.20.70 1 301 3.3E-93 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_17385 894fad3d76fd2df71bf6ef55ba00ac2d 259 Pfam PF08241 Methyltransferase domain 49 136 1.7E-13 T 23-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDG62_17385 894fad3d76fd2df71bf6ef55ba00ac2d 259 Gene3D G3DSA:3.40.50.150 11 243 4.2E-33 T 23-10-2018 CDG62_17385 894fad3d76fd2df71bf6ef55ba00ac2d 259 SUPERFAMILY SSF53335 3 185 3.28E-26 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_16770 c5ce33e5832b92ee92412157de86d61a 421 Gene3D G3DSA:3.40.309.10 229 378 3.4E-167 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG62_16770 c5ce33e5832b92ee92412157de86d61a 421 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 410 3.5E-154 T 23-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDG62_16770 c5ce33e5832b92ee92412157de86d61a 421 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 420 41.665 T 23-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDG62_16770 c5ce33e5832b92ee92412157de86d61a 421 SUPERFAMILY SSF53720 8 420 1.13E-121 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG62_16770 c5ce33e5832b92ee92412157de86d61a 421 PIRSF PIRSF000151 1 421 1.7E-181 T 23-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CDG62_16770 c5ce33e5832b92ee92412157de86d61a 421 Gene3D G3DSA:3.40.605.10 15 417 3.4E-167 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG62_16770 c5ce33e5832b92ee92412157de86d61a 421 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 327 349 - T 23-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDG62_16770 c5ce33e5832b92ee92412157de86d61a 421 Pfam PF00171 Aldehyde dehydrogenase family 313 377 1.1E-6 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG62_16770 c5ce33e5832b92ee92412157de86d61a 421 Pfam PF00171 Aldehyde dehydrogenase family 14 288 9.4E-18 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG62_05100 825f0eca92d8354a1477607c1e51097c 143 Pfam PF00085 Thioredoxin 38 137 5.3E-28 T 23-10-2018 IPR013766 Thioredoxin domain GO:0045454 CDG62_05100 825f0eca92d8354a1477607c1e51097c 143 Gene3D G3DSA:3.40.30.10 35 143 3.4E-31 T 23-10-2018 CDG62_05100 825f0eca92d8354a1477607c1e51097c 143 TIGRFAM TIGR01068 thioredoxin: thioredoxin 41 138 6.6E-31 T 23-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CDG62_05100 825f0eca92d8354a1477607c1e51097c 143 PRINTS PR00421 Thioredoxin family signature 64 73 1.5E-6 T 23-10-2018 CDG62_05100 825f0eca92d8354a1477607c1e51097c 143 PRINTS PR00421 Thioredoxin family signature 103 114 1.5E-6 T 23-10-2018 CDG62_05100 825f0eca92d8354a1477607c1e51097c 143 PRINTS PR00421 Thioredoxin family signature 56 64 1.5E-6 T 23-10-2018 CDG62_05100 825f0eca92d8354a1477607c1e51097c 143 PIRSF PIRSF000077 35 139 7.5E-31 T 23-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CDG62_05100 825f0eca92d8354a1477607c1e51097c 143 SUPERFAMILY SSF52833 25 140 9.71E-35 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_05100 825f0eca92d8354a1477607c1e51097c 143 Gene3D G3DSA:2.20.28.140 1 33 7.0E-13 T 23-10-2018 CDG62_05100 825f0eca92d8354a1477607c1e51097c 143 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 23-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDG62_07425 50474f8847a6ca04a3390f271d83e1b0 308 SUPERFAMILY SSF56349 108 300 1.56E-51 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG62_07425 50474f8847a6ca04a3390f271d83e1b0 308 Gene3D G3DSA:1.10.443.10 115 296 1.6E-54 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG62_07425 50474f8847a6ca04a3390f271d83e1b0 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 19 88 2.9E-13 T 23-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDG62_07425 50474f8847a6ca04a3390f271d83e1b0 308 SUPERFAMILY SSF47823 20 98 1.61E-11 T 23-10-2018 CDG62_07425 50474f8847a6ca04a3390f271d83e1b0 308 Gene3D G3DSA:1.10.150.130 2 108 1.6E-19 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG62_07425 50474f8847a6ca04a3390f271d83e1b0 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 302 48.754 T 23-10-2018 IPR023009 Tyrosine recombinase XerC/XerD CDG62_07425 50474f8847a6ca04a3390f271d83e1b0 308 Pfam PF00589 Phage integrase family 129 288 1.1E-39 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 Gene3D G3DSA:3.40.190.10 101 200 2.4E-84 T 23-10-2018 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 8.2E-21 T 23-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 23-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 38.731 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 2.5E-79 T 23-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 Gene3D G3DSA:3.30.160.40 219 303 9.6E-28 T 23-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 Gene3D G3DSA:3.40.190.10 4 208 2.4E-84 T 23-10-2018 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 PIRSF PIRSF001438 1 306 1.3E-120 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 8.7E-50 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 8.7E-50 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 8.7E-50 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 8.7E-50 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 8.7E-50 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 SUPERFAMILY SSF54782 219 305 1.7E-25 T 23-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 2.0E-114 T 23-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18055 1c3eb64fcce7a30579018dc6b04a2845 306 SUPERFAMILY SSF53850 2 216 3.02E-85 T 23-10-2018 CDG62_06840 eae896b2d4b9c0ad1df41936a95aeb5c 246 SUPERFAMILY SSF64438 14 245 6.96E-66 T 23-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CDG62_06840 eae896b2d4b9c0ad1df41936a95aeb5c 246 Gene3D G3DSA:3.60.140.10 10 246 5.6E-69 T 23-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily CDG62_06840 eae896b2d4b9c0ad1df41936a95aeb5c 246 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 246 2.1E-51 T 23-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase CDG62_06840 eae896b2d4b9c0ad1df41936a95aeb5c 246 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 27 243 1.7E-61 T 23-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase CDG62_06925 84eb6e15eb9aa4c6f3bd0a4522499d60 632 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 19 631 1.4E-223 T 23-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_06925 84eb6e15eb9aa4c6f3bd0a4522499d60 632 Pfam PF00890 FAD binding domain 19 437 4.0E-113 T 23-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_06925 84eb6e15eb9aa4c6f3bd0a4522499d60 632 SUPERFAMILY SSF46977 487 632 1.31E-38 T 23-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_06925 84eb6e15eb9aa4c6f3bd0a4522499d60 632 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 53 62 - T 23-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_06925 84eb6e15eb9aa4c6f3bd0a4522499d60 632 SUPERFAMILY SSF56425 246 364 5.83E-41 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_06925 84eb6e15eb9aa4c6f3bd0a4522499d60 632 Pfam PF02910 Fumarate reductase flavoprotein C-term 496 631 2.0E-34 T 23-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_06925 84eb6e15eb9aa4c6f3bd0a4522499d60 632 Gene3D G3DSA:1.20.58.100 467 581 1.4E-30 T 23-10-2018 CDG62_06925 84eb6e15eb9aa4c6f3bd0a4522499d60 632 PIRSF PIRSF000171 8 606 2.7E-34 T 23-10-2018 CDG62_06925 84eb6e15eb9aa4c6f3bd0a4522499d60 632 SUPERFAMILY SSF51905 10 469 2.07E-79 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_02875 3d430e964175ae362bbdcf34ea868a31 142 SUPERFAMILY SSF46689 16 64 6.27E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_02875 3d430e964175ae362bbdcf34ea868a31 142 Pfam PF01527 Transposase 16 61 9.3E-11 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CDG62_11550 3d430e964175ae362bbdcf34ea868a31 142 SUPERFAMILY SSF46689 16 64 6.27E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_11550 3d430e964175ae362bbdcf34ea868a31 142 Pfam PF01527 Transposase 16 61 9.3E-11 T 23-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CDG62_12720 82981fe577ce40ea02b433f4157e6332 404 SUPERFAMILY SSF82051 3 158 3.14E-55 T 23-10-2018 IPR036726 GTP1/OBG domain superfamily CDG62_12720 82981fe577ce40ea02b433f4157e6332 404 Gene3D G3DSA:2.70.210.12 1 158 3.7E-59 T 23-10-2018 IPR036726 GTP1/OBG domain superfamily CDG62_12720 82981fe577ce40ea02b433f4157e6332 404 Pfam PF01018 GTP1/OBG 4 158 1.3E-57 T 23-10-2018 IPR006169 GTP1/OBG domain CDG62_12720 82981fe577ce40ea02b433f4157e6332 404 PIRSF PIRSF002401 1 380 1.0E-133 T 23-10-2018 IPR035101 GTP-binding protein, Obg-type CDG62_12720 82981fe577ce40ea02b433f4157e6332 404 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.7E-34 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_12720 82981fe577ce40ea02b433f4157e6332 404 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.7E-34 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_12720 82981fe577ce40ea02b433f4157e6332 404 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.7E-34 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_12720 82981fe577ce40ea02b433f4157e6332 404 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.7E-34 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_12720 82981fe577ce40ea02b433f4157e6332 404 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.901 T 23-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CDG62_12720 82981fe577ce40ea02b433f4157e6332 404 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 3.3E-140 T 23-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CDG62_12720 82981fe577ce40ea02b433f4157e6332 404 Gene3D G3DSA:3.40.50.300 159 340 7.5E-48 T 23-10-2018 CDG62_12720 82981fe577ce40ea02b433f4157e6332 404 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 23-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 CDG62_12720 82981fe577ce40ea02b433f4157e6332 404 SUPERFAMILY SSF52540 151 336 2.02E-46 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12720 82981fe577ce40ea02b433f4157e6332 404 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.0E-22 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_04820 0c9fdf8d91a2dd619b3ecce82ea80457 335 Gene3D G3DSA:2.170.120.12 53 175 1.7E-79 T 23-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_04820 0c9fdf8d91a2dd619b3ecce82ea80457 335 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 225 1.6E-23 T 23-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_04820 0c9fdf8d91a2dd619b3ecce82ea80457 335 Gene3D G3DSA:1.10.150.20 243 327 2.4E-37 T 23-10-2018 CDG62_04820 0c9fdf8d91a2dd619b3ecce82ea80457 335 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 154 1.3E-20 T 23-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_04820 0c9fdf8d91a2dd619b3ecce82ea80457 335 SUPERFAMILY SSF55257 6 231 3.73E-31 T 23-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_04820 0c9fdf8d91a2dd619b3ecce82ea80457 335 SUPERFAMILY SSF47789 249 322 6.54E-26 T 23-10-2018 CDG62_04820 0c9fdf8d91a2dd619b3ecce82ea80457 335 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 315 34.691 T 23-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_04820 0c9fdf8d91a2dd619b3ecce82ea80457 335 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 306 4.8E-24 T 23-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_04820 0c9fdf8d91a2dd619b3ecce82ea80457 335 SUPERFAMILY SSF56553 53 176 3.66E-36 T 23-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_04820 0c9fdf8d91a2dd619b3ecce82ea80457 335 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 314 1.7E-105 T 23-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_04820 0c9fdf8d91a2dd619b3ecce82ea80457 335 SMART SM00662 23 232 4.9E-87 T 23-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_04820 0c9fdf8d91a2dd619b3ecce82ea80457 335 Gene3D G3DSA:3.30.1360.10 17 225 1.7E-79 T 23-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_04820 0c9fdf8d91a2dd619b3ecce82ea80457 335 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 7.0E-35 T 23-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_10710 1c58cc0cc1f9bbf8b44945dccba588d4 395 Gene3D G3DSA:3.90.1150.10 261 395 3.2E-51 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_10710 1c58cc0cc1f9bbf8b44945dccba588d4 395 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 13 393 54.462 T 23-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 CDG62_10710 1c58cc0cc1f9bbf8b44945dccba588d4 395 SUPERFAMILY SSF53383 29 393 3.19E-121 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_10710 1c58cc0cc1f9bbf8b44945dccba588d4 395 PIRSF PIRSF001434 4 395 2.1E-133 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG62_10710 1c58cc0cc1f9bbf8b44945dccba588d4 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 203 217 - T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG62_10710 1c58cc0cc1f9bbf8b44945dccba588d4 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 392 9.2E-142 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG62_10710 1c58cc0cc1f9bbf8b44945dccba588d4 395 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 12 392 6.7E-182 T 23-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 CDG62_10710 1c58cc0cc1f9bbf8b44945dccba588d4 395 Gene3D G3DSA:3.40.640.10 6 258 1.7E-89 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_06165 5dcc15101f3da74ed79cf5fbccb0c1b3 528 Pfam PF00005 ABC transporter 354 481 4.0E-16 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_06165 5dcc15101f3da74ed79cf5fbccb0c1b3 528 SUPERFAMILY SSF52540 351 514 5.83E-30 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_06165 5dcc15101f3da74ed79cf5fbccb0c1b3 528 Gene3D G3DSA:3.40.50.300 294 524 8.5E-33 T 23-10-2018 CDG62_06165 5dcc15101f3da74ed79cf5fbccb0c1b3 528 SUPERFAMILY SSF52540 8 213 6.88E-29 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_06165 5dcc15101f3da74ed79cf5fbccb0c1b3 528 SMART SM00382 361 524 8.0E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_06165 5dcc15101f3da74ed79cf5fbccb0c1b3 528 SMART SM00382 30 216 17.0 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_06165 5dcc15101f3da74ed79cf5fbccb0c1b3 528 Gene3D G3DSA:3.40.50.300 1 271 7.5E-40 T 23-10-2018 CDG62_06165 5dcc15101f3da74ed79cf5fbccb0c1b3 528 Pfam PF00005 ABC transporter 22 171 1.5E-16 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_13405 89af03e1baaa1bf80db64a5491aa5bab 678 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 378 640 3.9E-24 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_13405 89af03e1baaa1bf80db64a5491aa5bab 678 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 333 4.8E-76 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDG62_13405 89af03e1baaa1bf80db64a5491aa5bab 678 Gene3D G3DSA:3.40.50.720 378 671 2.2E-105 T 23-10-2018 CDG62_13405 89af03e1baaa1bf80db64a5491aa5bab 678 SUPERFAMILY SSF51971 336 520 6.12E-39 T 23-10-2018 CDG62_13405 89af03e1baaa1bf80db64a5491aa5bab 678 SUPERFAMILY SSF51905 472 632 4.65E-14 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_13405 89af03e1baaa1bf80db64a5491aa5bab 678 Gene3D G3DSA:3.20.20.70 5 371 2.2E-121 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_13405 89af03e1baaa1bf80db64a5491aa5bab 678 Gene3D G3DSA:3.50.50.60 474 630 2.2E-105 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_13405 89af03e1baaa1bf80db64a5491aa5bab 678 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 380 399 1.6E-12 T 23-10-2018 CDG62_13405 89af03e1baaa1bf80db64a5491aa5bab 678 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 501 519 1.6E-12 T 23-10-2018 CDG62_13405 89af03e1baaa1bf80db64a5491aa5bab 678 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 462 480 1.6E-12 T 23-10-2018 CDG62_13405 89af03e1baaa1bf80db64a5491aa5bab 678 SUPERFAMILY SSF51395 4 365 8.8E-109 T 23-10-2018 CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 Gene3D G3DSA:3.30.470.130 1 444 3.2E-176 T 23-10-2018 CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 Gene3D G3DSA:2.40.100.10 880 1103 4.7E-97 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 448 759 2.3E-88 T 23-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1197 0.0 T 23-10-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 471 741 1.5E-83 T 23-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 Gene3D G3DSA:3.30.1360.40 781 876 7.8E-30 T 23-10-2018 CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 SUPERFAMILY SSF52440 1 112 3.67E-48 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 318 1.3E-62 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 SUPERFAMILY SSF51246 330 441 4.55E-32 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 SUPERFAMILY SSF160467 798 890 1.31E-20 T 23-10-2018 CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 Gene3D G3DSA:2.40.50.100 1121 1198 1.1E-20 T 23-10-2018 CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 Gene3D G3DSA:2.40.100.10 621 773 1.7E-57 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.4E-45 T 23-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 SMART SM00796 797 1030 3.7E-116 T 23-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 SMART SM00797 470 758 5.4E-160 T 23-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 798 1020 9.8E-50 T 23-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 Pfam PF02785 Biotin carboxylase C-terminal domain 335 439 3.3E-31 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 Pfam PF00364 Biotin-requiring enzyme 1122 1197 7.5E-12 T 23-10-2018 IPR000089 Biotin/lipoyl attachment CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 SMART SM00878 335 439 2.3E-40 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 SUPERFAMILY SSF56059 83 346 4.6E-58 T 23-10-2018 CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 SUPERFAMILY SSF50891 622 748 6.83E-31 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 SUPERFAMILY SSF50891 914 1046 1.14E-25 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_11270 acb581126558ed300b6841ce7615cd64 1201 SUPERFAMILY SSF51230 1124 1197 2.75E-17 T 23-10-2018 IPR011053 Single hybrid motif CDG62_07110 37780b34d3ba02ae10d149102ad7bfd5 329 SUPERFAMILY SSF46785 2 83 4.69E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_07110 37780b34d3ba02ae10d149102ad7bfd5 329 Gene3D G3DSA:1.10.10.10 1 86 3.8E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_07110 37780b34d3ba02ae10d149102ad7bfd5 329 Gene3D G3DSA:3.40.190.10 170 279 5.3E-60 T 23-10-2018 CDG62_07110 37780b34d3ba02ae10d149102ad7bfd5 329 SUPERFAMILY SSF53850 90 305 4.34E-36 T 23-10-2018 CDG62_07110 37780b34d3ba02ae10d149102ad7bfd5 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.9E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_07110 37780b34d3ba02ae10d149102ad7bfd5 329 Gene3D G3DSA:3.40.190.10 92 303 5.3E-60 T 23-10-2018 CDG62_07110 37780b34d3ba02ae10d149102ad7bfd5 329 Pfam PF03466 LysR substrate binding domain 97 305 5.7E-15 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_07110 37780b34d3ba02ae10d149102ad7bfd5 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.0E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_07110 37780b34d3ba02ae10d149102ad7bfd5 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.0E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_07110 37780b34d3ba02ae10d149102ad7bfd5 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.0E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_17485 174dd48c85ab65c9043499d09f0ee00b 740 Pfam PF00270 DEAD/DEAH box helicase 210 371 2.1E-16 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDG62_17485 174dd48c85ab65c9043499d09f0ee00b 740 SMART SM00487 204 389 7.1E-22 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG62_17485 174dd48c85ab65c9043499d09f0ee00b 740 SMART SM00490 502 599 4.2E-5 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_17485 174dd48c85ab65c9043499d09f0ee00b 740 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 454 475 - T 23-10-2018 IPR013087 Zinc finger C2H2-type GO:0003676 CDG62_17485 174dd48c85ab65c9043499d09f0ee00b 740 Hamap MF_00983 Probable primosomal protein N' [priA]. 16 739 24.433 T 23-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CDG62_17485 174dd48c85ab65c9043499d09f0ee00b 740 Gene3D G3DSA:3.40.50.300 195 388 1.1E-75 T 23-10-2018 CDG62_17485 174dd48c85ab65c9043499d09f0ee00b 740 SUPERFAMILY SSF52540 415 619 1.43E-19 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17485 174dd48c85ab65c9043499d09f0ee00b 740 SUPERFAMILY SSF52540 205 379 2.33E-41 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17485 174dd48c85ab65c9043499d09f0ee00b 740 TIGRFAM TIGR00595 priA: primosomal protein N' 230 736 9.1E-188 T 23-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CDG62_17485 174dd48c85ab65c9043499d09f0ee00b 740 Gene3D G3DSA:1.10.8.630 13 125 4.8E-30 T 23-10-2018 CDG62_17485 174dd48c85ab65c9043499d09f0ee00b 740 Pfam PF00271 Helicase conserved C-terminal domain 532 598 1.2E-4 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_10845 8e4583ce07f77374dc51af9b853a08b6 431 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 80 190 1.4E-16 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG62_10845 8e4583ce07f77374dc51af9b853a08b6 431 SUPERFAMILY SSF56645 75 287 1.44E-32 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_10845 8e4583ce07f77374dc51af9b853a08b6 431 Gene3D G3DSA:1.10.540.10 65 193 1.4E-19 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG62_10845 8e4583ce07f77374dc51af9b853a08b6 431 Gene3D G3DSA:2.40.110.10 198 290 3.7E-9 T 23-10-2018 CDG62_10845 8e4583ce07f77374dc51af9b853a08b6 431 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 424 5.4E-30 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG62_10845 8e4583ce07f77374dc51af9b853a08b6 431 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 399 418 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG62_10845 8e4583ce07f77374dc51af9b853a08b6 431 Gene3D G3DSA:1.20.140.10 298 428 3.2E-36 T 23-10-2018 CDG62_10845 8e4583ce07f77374dc51af9b853a08b6 431 SUPERFAMILY SSF47203 300 425 3.87E-37 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_17465 dadf1a0b8cf5a85f93861916727541d9 112 Gene3D G3DSA:2.40.50.140 1 112 3.6E-30 T 23-10-2018 CDG62_17465 dadf1a0b8cf5a85f93861916727541d9 112 SUPERFAMILY SSF50249 4 111 6.0E-30 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_17465 dadf1a0b8cf5a85f93861916727541d9 112 Pfam PF01588 Putative tRNA binding domain 14 110 9.1E-14 T 23-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CDG62_17465 dadf1a0b8cf5a85f93861916727541d9 112 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 6 111 2.7E-48 T 23-10-2018 IPR008231 Probable chaperone CsaA CDG62_12570 e63569c135902167dabf356d8bf351f3 303 Gene3D G3DSA:3.40.50.300 25 190 3.3E-41 T 23-10-2018 CDG62_12570 e63569c135902167dabf356d8bf351f3 303 Gene3D G3DSA:1.10.8.300 205 302 6.2E-23 T 23-10-2018 CDG62_12570 e63569c135902167dabf356d8bf351f3 303 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 44 174 3.3E-58 T 23-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 CDG62_12570 e63569c135902167dabf356d8bf351f3 303 SUPERFAMILY SSF52540 35 288 1.98E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12570 e63569c135902167dabf356d8bf351f3 303 PIRSF PIRSF002849 2 302 1.2E-115 T 23-10-2018 CDG62_16755 9a10620e2265c7b2c254644c7e221d98 338 SUPERFAMILY SSF51445 3 286 2.95E-77 T 23-10-2018 IPR017853 Glycoside hydrolase superfamily CDG62_16755 9a10620e2265c7b2c254644c7e221d98 338 Gene3D G3DSA:3.20.20.300 1 337 1.7E-109 T 23-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 CDG62_16755 9a10620e2265c7b2c254644c7e221d98 338 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 288 3.3E-72 T 23-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CDG62_16755 9a10620e2265c7b2c254644c7e221d98 338 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 23-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CDG62_16755 9a10620e2265c7b2c254644c7e221d98 338 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 4 337 47.321 T 23-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 CDG62_04205 1d84886f6294eda1effc2063f1cc2bdd 361 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 69.191 T 23-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CDG62_04205 1d84886f6294eda1effc2063f1cc2bdd 361 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 26 352 5.9E-114 T 23-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CDG62_04205 1d84886f6294eda1effc2063f1cc2bdd 361 SUPERFAMILY SSF56796 4 354 1.44E-111 T 23-10-2018 CDG62_04205 1d84886f6294eda1effc2063f1cc2bdd 361 PIRSF PIRSF001455 12 361 9.3E-103 T 23-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CDG62_04205 1d84886f6294eda1effc2063f1cc2bdd 361 Pfam PF01761 3-dehydroquinate synthase 66 323 6.2E-108 T 23-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CDG62_04205 1d84886f6294eda1effc2063f1cc2bdd 361 Gene3D G3DSA:1.20.1090.10 172 360 2.5E-71 T 23-10-2018 CDG62_04205 1d84886f6294eda1effc2063f1cc2bdd 361 Gene3D G3DSA:3.40.50.1970 1 171 1.2E-65 T 23-10-2018 CDG62_10445 5aa3bd47233f035e274e6de8da81f375 228 ProSitePatterns PS00622 LuxR-type HTH domain signature. 182 209 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_10445 5aa3bd47233f035e274e6de8da81f375 228 Gene3D G3DSA:3.40.50.2300 9 112 1.3E-17 T 23-10-2018 CDG62_10445 5aa3bd47233f035e274e6de8da81f375 228 SMART SM00448 10 124 1.3E-20 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_10445 5aa3bd47233f035e274e6de8da81f375 228 SUPERFAMILY SSF52172 12 142 4.98E-25 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_10445 5aa3bd47233f035e274e6de8da81f375 228 Gene3D G3DSA:1.10.10.10 113 228 1.3E-32 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_10445 5aa3bd47233f035e274e6de8da81f375 228 Pfam PF00072 Response regulator receiver domain 12 122 1.1E-18 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_10445 5aa3bd47233f035e274e6de8da81f375 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 198 9.3E-15 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_10445 5aa3bd47233f035e274e6de8da81f375 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 210 9.3E-15 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_10445 5aa3bd47233f035e274e6de8da81f375 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 182 9.3E-15 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_10445 5aa3bd47233f035e274e6de8da81f375 228 SUPERFAMILY SSF46894 160 227 2.45E-21 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG62_10445 5aa3bd47233f035e274e6de8da81f375 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 167 221 8.2E-20 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_10445 5aa3bd47233f035e274e6de8da81f375 228 SMART SM00421 165 222 4.2E-22 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 SUPERFAMILY SSF53067 149 386 1.11E-77 T 23-10-2018 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 PIRSF PIRSF000722 1 390 9.9E-129 T 23-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 23-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 PRINTS PR00471 Acetate kinase family signature 194 215 2.8E-40 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 PRINTS PR00471 Acetate kinase family signature 165 178 2.8E-40 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 PRINTS PR00471 Acetate kinase family signature 5 16 2.8E-40 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 PRINTS PR00471 Acetate kinase family signature 368 380 2.8E-40 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 PRINTS PR00471 Acetate kinase family signature 313 329 2.8E-40 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 PRINTS PR00471 Acetate kinase family signature 291 304 2.8E-40 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 Hamap MF_00020 Acetate kinase [ackA]. 1 390 158.259 T 23-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 TIGRFAM TIGR00016 ackA: acetate kinase 3 386 2.3E-127 T 23-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 Gene3D G3DSA:3.30.420.40 190 395 1.0E-68 T 23-10-2018 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 Pfam PF00871 Acetokinase family 5 381 3.8E-125 T 23-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 Gene3D G3DSA:3.30.420.40 1 186 3.1E-61 T 23-10-2018 CDG62_16775 217f0e29b1ea9930f8fe74863b76a6a0 405 SUPERFAMILY SSF53067 4 186 2.12E-58 T 23-10-2018 CDG62_15605 0f6e8eb3ae52786ee509fefcce638849 427 Gene3D G3DSA:1.10.405.20 75 199 7.9E-29 T 23-10-2018 CDG62_15605 0f6e8eb3ae52786ee509fefcce638849 427 Pfam PF01593 Flavin containing amine oxidoreductase 10 264 2.1E-16 T 23-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CDG62_15605 0f6e8eb3ae52786ee509fefcce638849 427 Gene3D G3DSA:3.30.70.1990 281 370 7.9E-29 T 23-10-2018 CDG62_15605 0f6e8eb3ae52786ee509fefcce638849 427 SUPERFAMILY SSF51905 1 420 8.09E-45 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_15605 0f6e8eb3ae52786ee509fefcce638849 427 Gene3D G3DSA:3.50.50.60 3 405 7.9E-29 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_19200 f005a8600a31c4b8b48297e7189a7c3a 438 SUPERFAMILY SSF51338 32 90 4.65E-7 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG62_19200 f005a8600a31c4b8b48297e7189a7c3a 438 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 32 431 5.0E-193 T 23-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 CDG62_19200 f005a8600a31c4b8b48297e7189a7c3a 438 SUPERFAMILY SSF51556 75 378 5.11E-103 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG62_19200 f005a8600a31c4b8b48297e7189a7c3a 438 Gene3D G3DSA:2.30.40.10 10 429 8.9E-201 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG62_19200 f005a8600a31c4b8b48297e7189a7c3a 438 Pfam PF01979 Amidohydrolase family 73 432 3.2E-73 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CDG62_19200 f005a8600a31c4b8b48297e7189a7c3a 438 Gene3D G3DSA:3.20.20.140 76 393 8.9E-201 T 23-10-2018 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SUPERFAMILY SSF52172 1383 1500 4.55E-37 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Pfam PF00072 Response regulator receiver domain 1384 1495 4.6E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SMART SM00260 1210 1356 1.4E-25 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SUPERFAMILY SSF47226 23 120 5.5E-20 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1081 1216 9.0E-17 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SMART SM00073 200 295 4.1E-5 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SMART SM00073 23 120 0.0019 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SMART SM00073 728 825 0.076 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SMART SM00073 511 608 1.6E-11 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Gene3D G3DSA:3.40.50.12740 1382 1504 4.9E-39 T 23-10-2018 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Pfam PF01627 Hpt domain 203 275 2.0E-10 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Pfam PF01627 Hpt domain 734 798 8.8E-10 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Pfam PF01627 Hpt domain 25 103 8.5E-11 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Pfam PF01627 Hpt domain 513 595 1.0E-13 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SMART SM01231 895 1032 8.2E-9 T 23-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Gene3D G3DSA:1.20.120.160 200 323 7.3E-16 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Gene3D G3DSA:1.20.120.160 731 848 6.0E-15 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Gene3D G3DSA:1.20.120.160 507 646 1.5E-24 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Gene3D G3DSA:2.40.50.180 1241 1310 7.7E-32 T 23-10-2018 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SUPERFAMILY SSF50341 1217 1354 8.37E-20 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SMART SM00387 1077 1218 4.5E-21 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Pfam PF01584 CheW-like domain 1223 1358 3.1E-19 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SMART SM00448 1382 1495 2.7E-36 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Gene3D G3DSA:1.20.120.160 16 117 9.6E-19 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SUPERFAMILY SSF47226 510 621 8.11E-25 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1162 1172 2.2E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1178 1196 2.2E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1122 1136 2.2E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1202 1215 2.2E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Gene3D G3DSA:3.30.565.10 1031 1217 1.8E-52 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SUPERFAMILY SSF47226 201 310 8.24E-18 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SUPERFAMILY SSF47226 734 817 1.44E-14 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 Gene3D G3DSA:2.30.30.40 1218 1351 7.7E-32 T 23-10-2018 CDG62_14480 b453cc4f4c13955821497e707c217264 1504 SUPERFAMILY SSF55874 1035 1215 2.36E-35 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_07175 84f1e3a8998b332dac85b3113e04756a 164 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 7.1E-24 T 23-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CDG62_07175 84f1e3a8998b332dac85b3113e04756a 164 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 3 156 8.6E-70 T 23-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CDG62_07175 84f1e3a8998b332dac85b3113e04756a 164 Gene3D G3DSA:1.10.287.180 1 76 6.4E-29 T 23-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CDG62_07175 84f1e3a8998b332dac85b3113e04756a 164 PIRSF PIRSF006092 1 158 2.9E-42 T 23-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CDG62_07175 84f1e3a8998b332dac85b3113e04756a 164 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 23-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CDG62_07175 84f1e3a8998b332dac85b3113e04756a 164 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 49.011 T 23-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CDG62_07175 84f1e3a8998b332dac85b3113e04756a 164 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 25.511 T 23-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CDG62_07175 84f1e3a8998b332dac85b3113e04756a 164 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 23-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CDG62_07175 84f1e3a8998b332dac85b3113e04756a 164 Gene3D G3DSA:3.10.50.30 77 159 4.2E-29 T 23-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CDG62_07175 84f1e3a8998b332dac85b3113e04756a 164 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 7.8E-22 T 23-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CDG62_07175 84f1e3a8998b332dac85b3113e04756a 164 SUPERFAMILY SSF46557 3 78 3.92E-25 T 23-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CDG62_07175 84f1e3a8998b332dac85b3113e04756a 164 SUPERFAMILY SSF54534 81 156 4.97E-19 T 23-10-2018 CDG62_06940 514771070da5fbf6dc62bf253730b591 404 SUPERFAMILY SSF47005 116 155 1.57E-9 T 23-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CDG62_06940 514771070da5fbf6dc62bf253730b591 404 SUPERFAMILY SSF51230 1 93 5.1E-24 T 23-10-2018 IPR011053 Single hybrid motif CDG62_06940 514771070da5fbf6dc62bf253730b591 404 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 175 401 1.7E-80 T 23-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 CDG62_06940 514771070da5fbf6dc62bf253730b591 404 Gene3D G3DSA:2.40.50.100 2 79 2.0E-21 T 23-10-2018 CDG62_06940 514771070da5fbf6dc62bf253730b591 404 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 403 2.3E-179 T 23-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CDG62_06940 514771070da5fbf6dc62bf253730b591 404 Gene3D G3DSA:4.10.320.10 110 157 7.1E-12 T 23-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CDG62_06940 514771070da5fbf6dc62bf253730b591 404 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 23-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDG62_06940 514771070da5fbf6dc62bf253730b591 404 Pfam PF02817 e3 binding domain 121 151 2.0E-10 T 23-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 CDG62_06940 514771070da5fbf6dc62bf253730b591 404 Gene3D G3DSA:3.30.559.10 172 404 1.9E-94 T 23-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CDG62_06940 514771070da5fbf6dc62bf253730b591 404 Pfam PF00364 Biotin-requiring enzyme 4 75 1.4E-19 T 23-10-2018 IPR000089 Biotin/lipoyl attachment CDG62_06940 514771070da5fbf6dc62bf253730b591 404 SUPERFAMILY SSF52777 175 403 7.12E-88 T 23-10-2018 CDG62_12435 c0e6ca88115aa66847162269bf52e5a2 343 Pfam PF11412 Disulphide bond corrector protein DsbC 32 145 1.8E-30 T 23-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CDG62_12435 c0e6ca88115aa66847162269bf52e5a2 343 SUPERFAMILY SSF74863 32 145 1.57E-31 T 23-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CDG62_12435 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:3.30.360.10 155 281 1.1E-31 T 23-10-2018 CDG62_12435 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:3.30.360.10 282 343 3.3E-17 T 23-10-2018 CDG62_12435 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:2.60.40.1250 24 154 3.6E-38 T 23-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CDG62_00890 c0e6ca88115aa66847162269bf52e5a2 343 Pfam PF11412 Disulphide bond corrector protein DsbC 32 145 1.8E-30 T 23-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CDG62_00890 c0e6ca88115aa66847162269bf52e5a2 343 SUPERFAMILY SSF74863 32 145 1.57E-31 T 23-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CDG62_00890 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:3.30.360.10 155 281 1.1E-31 T 23-10-2018 CDG62_00890 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:3.30.360.10 282 343 3.3E-17 T 23-10-2018 CDG62_00890 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:2.60.40.1250 24 154 3.6E-38 T 23-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 Pfam PF00551 Formyl transferase 94 269 4.5E-34 T 23-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 SUPERFAMILY SSF55021 8 90 2.01E-13 T 23-10-2018 CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 Pfam PF01842 ACT domain 10 66 1.3E-7 T 23-10-2018 IPR002912 ACT domain CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 SUPERFAMILY SSF53328 94 288 4.06E-56 T 23-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 287 43.48 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 Gene3D G3DSA:3.40.50.170 94 288 3.6E-67 T 23-10-2018 CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 287 3.0E-115 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 7.3E-58 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 95 117 7.3E-58 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 117 144 7.3E-58 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 7.3E-58 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 7.3E-58 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 44 56 7.3E-58 T 23-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 Gene3D G3DSA:3.30.70.260 5 90 4.3E-22 T 23-10-2018 CDG62_16985 1cb99be105dca80c4bcf00a886dbff6a 288 PIRSF PIRSF036480 6 288 6.7E-109 T 23-10-2018 CDG62_05990 275766ade977afafe014092f86ef3f4f 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 3.9E-11 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDG62_05990 275766ade977afafe014092f86ef3f4f 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 3.9E-11 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDG62_05990 275766ade977afafe014092f86ef3f4f 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 3.9E-11 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDG62_05990 275766ade977afafe014092f86ef3f4f 144 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 142 3.7E-39 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDG62_05990 275766ade977afafe014092f86ef3f4f 144 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 141 9.2E-44 T 23-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CDG62_05990 275766ade977afafe014092f86ef3f4f 144 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 142 23.791 T 23-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 CDG62_05990 275766ade977afafe014092f86ef3f4f 144 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 23-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site CDG62_05990 275766ade977afafe014092f86ef3f4f 144 SUPERFAMILY SSF81330 13 137 3.4E-35 T 23-10-2018 IPR036019 Gated mechanosensitive channel CDG62_05990 275766ade977afafe014092f86ef3f4f 144 Gene3D G3DSA:1.10.1200.120 3 144 2.5E-42 T 23-10-2018 IPR036019 Gated mechanosensitive channel CDG62_06620 2115c51f8559233e33ba42bb99713d50 84 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 26.536 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_06620 2115c51f8559233e33ba42bb99713d50 84 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 4.0E-18 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_06620 2115c51f8559233e33ba42bb99713d50 84 Pfam PF01016 Ribosomal L27 protein 2 82 2.1E-38 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_06620 2115c51f8559233e33ba42bb99713d50 84 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 3.2E-39 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_06620 2115c51f8559233e33ba42bb99713d50 84 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 23-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_06620 2115c51f8559233e33ba42bb99713d50 84 SUPERFAMILY SSF110324 2 80 1.6E-33 T 23-10-2018 CDG62_06620 2115c51f8559233e33ba42bb99713d50 84 Gene3D G3DSA:2.40.50.100 21 84 3.0E-30 T 23-10-2018 CDG62_06620 2115c51f8559233e33ba42bb99713d50 84 PRINTS PR00063 Ribosomal protein L27 signature 4 28 7.1E-38 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_06620 2115c51f8559233e33ba42bb99713d50 84 PRINTS PR00063 Ribosomal protein L27 signature 29 53 7.1E-38 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_06620 2115c51f8559233e33ba42bb99713d50 84 PRINTS PR00063 Ribosomal protein L27 signature 54 78 7.1E-38 T 23-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_09055 e51cf04d33c37d22557340fac18e262b 200 Gene3D G3DSA:1.10.10.10 151 200 2.5E-16 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_09055 e51cf04d33c37d22557340fac18e262b 200 Gene3D G3DSA:1.10.10.10 107 150 5.9E-8 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_09055 e51cf04d33c37d22557340fac18e262b 200 Pfam PF02631 RecX family 88 197 5.1E-27 T 23-10-2018 IPR003783 Regulatory protein RecX GO:0006282 CDG62_09055 e51cf04d33c37d22557340fac18e262b 200 Hamap MF_01114 Regulatory protein RecX [recX]. 20 200 12.092 T 23-10-2018 IPR003783 Regulatory protein RecX GO:0006282 CDG62_14880 3a012b559c51082bd15aade1b7953d39 205 SUPERFAMILY SSF56784 1 195 1.05E-45 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_14880 3a012b559c51082bd15aade1b7953d39 205 Pfam PF00702 haloacid dehalogenase-like hydrolase 63 164 1.1E-11 T 23-10-2018 CDG62_14880 3a012b559c51082bd15aade1b7953d39 205 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 1 201 4.0E-98 T 23-10-2018 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 CDG62_14880 3a012b559c51082bd15aade1b7953d39 205 Gene3D G3DSA:3.40.50.1000 3 191 1.3E-79 T 23-10-2018 IPR023214 HAD superfamily CDG62_14880 3a012b559c51082bd15aade1b7953d39 205 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 160 2.0E-12 T 23-10-2018 CDG62_14880 3a012b559c51082bd15aade1b7953d39 205 Gene3D G3DSA:3.90.1470.10 13 128 1.3E-79 T 23-10-2018 CDG62_13765 fa49e7cc572bfe0c9c65f244aa14b184 314 PIRSF PIRSF015689 1 314 3.5E-129 T 23-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDG62_13765 fa49e7cc572bfe0c9c65f244aa14b184 314 SMART SM00859 5 123 3.9E-12 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDG62_13765 fa49e7cc572bfe0c9c65f244aa14b184 314 Gene3D G3DSA:3.40.50.720 5 305 1.2E-126 T 23-10-2018 CDG62_13765 fa49e7cc572bfe0c9c65f244aa14b184 314 SUPERFAMILY SSF55347 131 284 4.58E-64 T 23-10-2018 CDG62_13765 fa49e7cc572bfe0c9c65f244aa14b184 314 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 119 1.5E-11 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDG62_13765 fa49e7cc572bfe0c9c65f244aa14b184 314 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 131 284 7.6E-63 T 23-10-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDG62_13765 fa49e7cc572bfe0c9c65f244aa14b184 314 Gene3D G3DSA:3.30.360.10 131 298 1.2E-126 T 23-10-2018 CDG62_13765 fa49e7cc572bfe0c9c65f244aa14b184 314 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 314 139.917 T 23-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDG62_13765 fa49e7cc572bfe0c9c65f244aa14b184 314 SUPERFAMILY SSF51735 1 155 2.38E-30 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_13765 fa49e7cc572bfe0c9c65f244aa14b184 314 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 308 2.1E-138 T 23-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CDG62_10280 4c9e6a0cf5016cb9a4b51f7a02ba2f5c 154 Pfam PF01047 MarR family 51 102 2.7E-7 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG62_10280 4c9e6a0cf5016cb9a4b51f7a02ba2f5c 154 Gene3D G3DSA:1.10.10.10 3 153 3.2E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_10280 4c9e6a0cf5016cb9a4b51f7a02ba2f5c 154 SMART SM00347 38 138 8.1E-12 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG62_10280 4c9e6a0cf5016cb9a4b51f7a02ba2f5c 154 SUPERFAMILY SSF46785 14 152 3.64E-26 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_12400 2f16280f9964d435383cc4fccf3bfee8 341 Gene3D G3DSA:3.30.420.10 172 333 1.6E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_12400 2f16280f9964d435383cc4fccf3bfee8 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG62_12400 2f16280f9964d435383cc4fccf3bfee8 341 Pfam PF00665 Integrase core domain 180 285 2.7E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_12400 2f16280f9964d435383cc4fccf3bfee8 341 SUPERFAMILY SSF53098 180 326 1.52E-27 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_01935 2f16280f9964d435383cc4fccf3bfee8 341 Gene3D G3DSA:3.30.420.10 172 333 1.6E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_01935 2f16280f9964d435383cc4fccf3bfee8 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG62_01935 2f16280f9964d435383cc4fccf3bfee8 341 Pfam PF00665 Integrase core domain 180 285 2.7E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_01935 2f16280f9964d435383cc4fccf3bfee8 341 SUPERFAMILY SSF53098 180 326 1.52E-27 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_01945 2f16280f9964d435383cc4fccf3bfee8 341 Gene3D G3DSA:3.30.420.10 172 333 1.6E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_01945 2f16280f9964d435383cc4fccf3bfee8 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG62_01945 2f16280f9964d435383cc4fccf3bfee8 341 Pfam PF00665 Integrase core domain 180 285 2.7E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_01945 2f16280f9964d435383cc4fccf3bfee8 341 SUPERFAMILY SSF53098 180 326 1.52E-27 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_00855 2f16280f9964d435383cc4fccf3bfee8 341 Gene3D G3DSA:3.30.420.10 172 333 1.6E-10 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_00855 2f16280f9964d435383cc4fccf3bfee8 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG62_00855 2f16280f9964d435383cc4fccf3bfee8 341 Pfam PF00665 Integrase core domain 180 285 2.7E-15 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_00855 2f16280f9964d435383cc4fccf3bfee8 341 SUPERFAMILY SSF53098 180 326 1.52E-27 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_05405 e23a9404a63912943fdf27a2467a7052 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 307 1.1E-129 T 23-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 CDG62_05405 e23a9404a63912943fdf27a2467a7052 308 Pfam PF01063 Amino-transferase class IV 36 268 9.5E-54 T 23-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CDG62_05405 e23a9404a63912943fdf27a2467a7052 308 Gene3D G3DSA:3.30.470.10 7 133 1.0E-38 T 23-10-2018 CDG62_05405 e23a9404a63912943fdf27a2467a7052 308 Gene3D G3DSA:3.20.10.10 134 308 1.1E-53 T 23-10-2018 CDG62_05405 e23a9404a63912943fdf27a2467a7052 308 SUPERFAMILY SSF56752 2 304 1.06E-101 T 23-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CDG62_10200 d55683ea4188bb7eb20d4e8adc3b1deb 237 SUPERFAMILY SSF52141 15 235 5.01E-89 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG62_10200 d55683ea4188bb7eb20d4e8adc3b1deb 237 SMART SM00986 62 223 1.9E-35 T 23-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG62_10200 d55683ea4188bb7eb20d4e8adc3b1deb 237 SMART SM00987 62 223 1.9E-35 T 23-10-2018 CDG62_10200 d55683ea4188bb7eb20d4e8adc3b1deb 237 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 18 227 1.9E-82 T 23-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG62_10200 d55683ea4188bb7eb20d4e8adc3b1deb 237 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 17 234 40.142 T 23-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG62_10200 d55683ea4188bb7eb20d4e8adc3b1deb 237 Gene3D G3DSA:3.40.470.10 9 237 3.5E-98 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG62_10200 d55683ea4188bb7eb20d4e8adc3b1deb 237 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 70 79 - T 23-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG62_10200 d55683ea4188bb7eb20d4e8adc3b1deb 237 Pfam PF03167 Uracil DNA glycosylase superfamily 67 222 4.4E-26 T 23-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1278 20.267 T 23-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 Pfam PF02769 AIR synthase related protein, C-terminal domain 863 955 3.9E-7 T 23-10-2018 IPR010918 PurM-like, C-terminal domain CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 Pfam PF02769 AIR synthase related protein, C-terminal domain 425 582 4.3E-28 T 23-10-2018 IPR010918 PurM-like, C-terminal domain CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 SUPERFAMILY SSF55326 624 811 1.6E-64 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 SUPERFAMILY SSF55326 215 421 6.98E-60 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 SUPERFAMILY SSF56042 422 650 4.64E-51 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 Gene3D G3DSA:3.40.50.880 966 1278 2.6E-133 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 SUPERFAMILY SSF109736 149 214 1.1E-20 T 23-10-2018 CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 SUPERFAMILY SSF82697 1 145 3.71E-32 T 23-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 Gene3D G3DSA:3.30.1330.10 611 800 2.2E-25 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 SMART SM01211 1023 1277 7.2E-151 T 23-10-2018 CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 SUPERFAMILY SSF52317 1022 1277 8.02E-95 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 Gene3D G3DSA:1.10.8.750 147 207 2.6E-27 T 23-10-2018 CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 Gene3D G3DSA:3.30.1330.10 208 415 6.0E-42 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1023 1277 1.2E-105 T 23-10-2018 CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 Gene3D G3DSA:3.90.650.10 416 600 1.0E-58 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 Gene3D G3DSA:3.90.650.10 801 965 1.7E-20 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 5 1276 0.0 T 23-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG62_13015 050d934790d00eaaf813bc84a79b02a1 1278 SUPERFAMILY SSF56042 812 1018 5.23E-41 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 Gene3D G3DSA:2.40.30.10 801 898 7.3E-29 T 23-10-2018 CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 Pfam PF00009 Elongation factor Tu GTP binding domain 404 558 6.2E-34 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 ProSitePatterns PS01176 Initiation factor 2 signature. 850 872 - T 23-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 Gene3D G3DSA:2.40.30.10 571 688 8.0E-40 T 23-10-2018 CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 318 899 1.0E-244 T 23-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 401 558 4.8E-33 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 323 372 6.9E-12 T 23-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 SUPERFAMILY SSF52540 397 567 1.26E-52 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 Gene3D G3DSA:3.30.56.50 2 51 1.2E-6 T 23-10-2018 CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 Pfam PF11987 Translation-initiation factor 2 684 789 9.9E-35 T 23-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 SUPERFAMILY SSF50447 572 655 1.39E-23 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 SUPERFAMILY SSF52156 677 806 7.59E-35 T 23-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 897 16.67 T 23-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 Gene3D G3DSA:3.40.50.10050 693 800 4.4E-35 T 23-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 SUPERFAMILY SSF50447 801 897 3.53E-29 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 Gene3D G3DSA:3.40.50.300 397 570 5.3E-70 T 23-10-2018 CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 98 3.4E-13 T 23-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial CDG62_17650 d6149519c9994e154a1d6a73d97a9a80 899 SUPERFAMILY SSF46955 3 51 7.32E-8 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily CDG62_03540 a323bbaf79afad7f706773cd57109dfe 284 Gene3D G3DSA:3.40.50.11690 130 258 1.6E-31 T 23-10-2018 CDG62_03540 a323bbaf79afad7f706773cd57109dfe 284 Pfam PF03799 Cell division protein FtsQ 132 245 2.6E-17 T 23-10-2018 IPR005548 Cell division protein FtsQ/DivIB CDG62_03540 a323bbaf79afad7f706773cd57109dfe 284 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 32 253 21.361 T 23-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 CDG62_03540 a323bbaf79afad7f706773cd57109dfe 284 Pfam PF08478 POTRA domain, FtsQ-type 60 127 7.2E-11 T 23-10-2018 IPR013685 POTRA domain, FtsQ-type CDG62_03540 a323bbaf79afad7f706773cd57109dfe 284 Gene3D G3DSA:3.10.20.310 59 127 1.0E-10 T 23-10-2018 CDG62_05515 4510ef2d0676b18faaab1e7948d67b40 487 Gene3D G3DSA:3.30.870.10 281 454 1.0E-26 T 23-10-2018 CDG62_05515 4510ef2d0676b18faaab1e7948d67b40 487 SUPERFAMILY SSF56024 75 266 4.26E-15 T 23-10-2018 CDG62_05515 4510ef2d0676b18faaab1e7948d67b40 487 SUPERFAMILY SSF56024 304 443 3.34E-19 T 23-10-2018 CDG62_05515 4510ef2d0676b18faaab1e7948d67b40 487 Pfam PF13091 PLD-like domain 316 450 1.8E-25 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDG62_06195 846003b68bcd0c455cb453347a522f91 251 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 25 244 5.9E-40 T 23-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_06195 846003b68bcd0c455cb453347a522f91 251 Gene3D G3DSA:3.30.930.10 22 202 6.0E-38 T 23-10-2018 CDG62_06195 846003b68bcd0c455cb453347a522f91 251 Pfam PF03099 Biotin/lipoate A/B protein ligase family 27 141 6.6E-11 T 23-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CDG62_06195 846003b68bcd0c455cb453347a522f91 251 SUPERFAMILY SSF55681 16 190 9.61E-35 T 23-10-2018 CDG62_16255 e12ee4fc25ac6904206116441a150305 322 Gene3D G3DSA:3.60.40.10 95 321 9.4E-41 T 23-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDG62_16255 e12ee4fc25ac6904206116441a150305 322 SMART SM00331 126 320 6.2E-11 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDG62_16255 e12ee4fc25ac6904206116441a150305 322 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 153 312 1.0E-21 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDG62_04840 51e19b00149183d2b6061db073cd4c6d 390 SUPERFAMILY SSF47203 241 390 1.93E-45 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_04840 51e19b00149183d2b6061db073cd4c6d 390 SUPERFAMILY SSF56645 13 253 4.58E-85 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_04840 51e19b00149183d2b6061db073cd4c6d 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 230 4.8E-26 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG62_04840 51e19b00149183d2b6061db073cd4c6d 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 130 1.2E-33 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG62_04840 51e19b00149183d2b6061db073cd4c6d 390 Gene3D G3DSA:1.20.140.10 249 390 6.2E-42 T 23-10-2018 CDG62_04840 51e19b00149183d2b6061db073cd4c6d 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 242 390 9.7E-40 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG62_04840 51e19b00149183d2b6061db073cd4c6d 390 Gene3D G3DSA:1.10.540.10 10 132 3.3E-36 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG62_04840 51e19b00149183d2b6061db073cd4c6d 390 Gene3D G3DSA:2.40.110.10 133 248 7.8E-42 T 23-10-2018 CDG62_04840 51e19b00149183d2b6061db073cd4c6d 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 349 368 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG62_17950 78c2d21d54610d07c1bd8907a05057e5 231 PIRSF PIRSF002155 1 227 2.4E-72 T 23-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_17950 78c2d21d54610d07c1bd8907a05057e5 231 Pfam PF00687 Ribosomal protein L1p/L10e family 35 220 5.0E-49 T 23-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CDG62_17950 78c2d21d54610d07c1bd8907a05057e5 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.2E-98 T 23-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CDG62_17950 78c2d21d54610d07c1bd8907a05057e5 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 23-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_17950 78c2d21d54610d07c1bd8907a05057e5 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 41.671 T 23-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CDG62_17950 78c2d21d54610d07c1bd8907a05057e5 231 Gene3D G3DSA:3.30.190.20 25 221 9.2E-76 T 23-10-2018 CDG62_17950 78c2d21d54610d07c1bd8907a05057e5 231 Gene3D G3DSA:3.40.50.790 68 159 9.2E-76 T 23-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CDG62_17950 78c2d21d54610d07c1bd8907a05057e5 231 SUPERFAMILY SSF56808 6 227 1.1E-77 T 23-10-2018 IPR023674 Ribosomal protein L1-like CDG62_03585 ada577c9dfcca7827ea1403164b14117 265 Pfam PF00753 Metallo-beta-lactamase superfamily 30 229 1.2E-13 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_03585 ada577c9dfcca7827ea1403164b14117 265 Gene3D G3DSA:3.60.15.10 5 248 7.3E-31 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_03585 ada577c9dfcca7827ea1403164b14117 265 SMART SM00849 32 229 2.9E-17 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_03585 ada577c9dfcca7827ea1403164b14117 265 SUPERFAMILY SSF56281 30 250 3.79E-28 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_09000 5a204c2679e652549de5e3bf9ba09815 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 183 200 - T 23-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 CDG62_09000 5a204c2679e652549de5e3bf9ba09815 250 Gene3D G3DSA:3.40.1180.10 2 238 3.5E-88 T 23-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 CDG62_09000 5a204c2679e652549de5e3bf9ba09815 250 SUPERFAMILY SSF64005 10 233 2.35E-79 T 23-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 CDG62_09000 5a204c2679e652549de5e3bf9ba09815 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 10 237 1.6E-84 T 23-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CDG62_09000 5a204c2679e652549de5e3bf9ba09815 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 10 238 36.256 T 23-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CDG62_09000 5a204c2679e652549de5e3bf9ba09815 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 17 237 5.1E-73 T 23-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CDG62_19245 c09f12ee37e5d55cfadc7d4a100ee3e1 106 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 24.081 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CDG62_19245 c09f12ee37e5d55cfadc7d4a100ee3e1 106 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 7 74 7.0E-29 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CDG62_19245 c09f12ee37e5d55cfadc7d4a100ee3e1 106 SMART SM01234 1 68 1.3E-44 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CDG62_19245 c09f12ee37e5d55cfadc7d4a100ee3e1 106 Pfam PF01809 Haemolytic domain 3 68 6.5E-30 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CDG62_19245 c09f12ee37e5d55cfadc7d4a100ee3e1 106 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 5.0E-23 T 23-10-2018 IPR002696 Putative membrane protein insertion efficiency factor CDG62_10665 f1a5a0d63f85b8afe83141f5b6c2f10c 206 Gene3D G3DSA:1.10.10.690 50 206 8.1E-25 T 23-10-2018 IPR027405 YidB-like CDG62_10665 f1a5a0d63f85b8afe83141f5b6c2f10c 206 SUPERFAMILY SSF140804 55 204 1.31E-24 T 23-10-2018 IPR027405 YidB-like CDG62_10665 f1a5a0d63f85b8afe83141f5b6c2f10c 206 Pfam PF06078 Bacterial protein of unknown function (DUF937) 15 180 8.7E-18 T 23-10-2018 IPR009282 Protein of unknown function DUF937 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 Gene3D G3DSA:2.40.30.10 103 202 3.0E-25 T 23-10-2018 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 23-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 SUPERFAMILY SSF63380 108 205 2.38E-24 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 Gene3D G3DSA:3.10.20.30 1 102 4.3E-31 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 156 163 1.2E-7 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 214 233 1.2E-7 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 303 311 1.2E-7 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 Gene3D G3DSA:3.40.50.80 203 335 3.7E-39 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 SUPERFAMILY SSF54292 9 101 9.83E-28 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 88 6.5E-16 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 Pfam PF00970 Oxidoreductase FAD-binding domain 111 205 4.1E-20 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 Pfam PF00175 Oxidoreductase NAD-binding domain 215 317 9.2E-23 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 SUPERFAMILY SSF52343 205 335 4.19E-36 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 139 151 8.0E-24 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 199 208 8.0E-24 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 156 163 8.0E-24 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 214 233 8.0E-24 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 239 248 8.0E-24 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_11210 b1d4f434f5b11c61e5b74e08eff8bd6f 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 8.0E-24 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_15560 7ad5675994c148de8ab3489a5163bf41 293 Gene3D G3DSA:3.40.190.10 167 262 8.4E-34 T 23-10-2018 CDG62_15560 7ad5675994c148de8ab3489a5163bf41 293 SUPERFAMILY SSF53850 97 288 4.03E-22 T 23-10-2018 CDG62_15560 7ad5675994c148de8ab3489a5163bf41 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 7.6E-20 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_15560 7ad5675994c148de8ab3489a5163bf41 293 Gene3D G3DSA:3.40.190.10 104 287 8.4E-34 T 23-10-2018 CDG62_15560 7ad5675994c148de8ab3489a5163bf41 293 SUPERFAMILY SSF46785 5 85 5.78E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_15560 7ad5675994c148de8ab3489a5163bf41 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.0E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_15560 7ad5675994c148de8ab3489a5163bf41 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.0E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_15560 7ad5675994c148de8ab3489a5163bf41 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.0E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_15560 7ad5675994c148de8ab3489a5163bf41 293 Gene3D G3DSA:1.10.10.10 8 96 3.1E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15560 7ad5675994c148de8ab3489a5163bf41 293 Pfam PF03466 LysR substrate binding domain 96 286 2.1E-20 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_11820 ef353f2753eb559b81786ebcad7b576b 160 SUPERFAMILY SSF142433 4 135 6.15E-26 T 23-10-2018 IPR036653 CinA-like, C-terminal CDG62_11820 ef353f2753eb559b81786ebcad7b576b 160 Gene3D G3DSA:3.90.950.20 1 159 1.8E-27 T 23-10-2018 IPR036653 CinA-like, C-terminal CDG62_11820 ef353f2753eb559b81786ebcad7b576b 160 Pfam PF02464 Competence-damaged protein 6 137 1.4E-21 T 23-10-2018 IPR008136 CinA, C-terminal CDG62_06365 665841125684c6f0cf885b935ef7a02c 185 Pfam PF02620 Uncharacterized ACR, COG1399 64 181 6.9E-15 T 23-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CDG62_11315 87f3adddc62f45233e81c31d1f611c40 183 Pfam PF01613 Flavin reductase like domain 33 178 6.8E-31 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CDG62_11315 87f3adddc62f45233e81c31d1f611c40 183 Hamap MF_00833 FMN reductase (NADH) RutF [rutF]. 21 183 39.579 T 23-10-2018 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 CDG62_11315 87f3adddc62f45233e81c31d1f611c40 183 SUPERFAMILY SSF50475 29 177 1.13E-43 T 23-10-2018 CDG62_11315 87f3adddc62f45233e81c31d1f611c40 183 Gene3D G3DSA:2.30.110.10 10 179 1.9E-43 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CDG62_11315 87f3adddc62f45233e81c31d1f611c40 183 SMART SM00903 33 178 2.5E-49 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CDG62_11315 87f3adddc62f45233e81c31d1f611c40 183 TIGRFAM TIGR03615 RutF: pyrimidine utilization flavin reductase protein F 25 178 1.9E-81 T 23-10-2018 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 CDG62_09030 a122ea10a7afad309b4f9a435b76e25b 355 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 7 328 32.872 T 23-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CDG62_09030 a122ea10a7afad309b4f9a435b76e25b 355 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 25 92 7.0E-19 T 23-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 CDG62_09030 a122ea10a7afad309b4f9a435b76e25b 355 SUPERFAMILY SSF51161 35 319 3.12E-68 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG62_09030 a122ea10a7afad309b4f9a435b76e25b 355 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 167 181 0.17 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_09030 a122ea10a7afad309b4f9a435b76e25b 355 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 224 259 8.0E-7 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_09030 a122ea10a7afad309b4f9a435b76e25b 355 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 134 2.1E-4 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_09030 a122ea10a7afad309b4f9a435b76e25b 355 Gene3D G3DSA:2.160.10.10 103 311 1.9E-64 T 23-10-2018 CDG62_09030 a122ea10a7afad309b4f9a435b76e25b 355 Gene3D G3DSA:3.40.1390.10 2 102 4.6E-32 T 23-10-2018 CDG62_09030 a122ea10a7afad309b4f9a435b76e25b 355 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 10 327 1.7E-102 T 23-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CDG62_18945 900764faf1c6b02c253497fb151ca3d5 234 Gene3D G3DSA:3.10.50.40 96 234 2.0E-57 T 23-10-2018 CDG62_18945 900764faf1c6b02c253497fb151ca3d5 234 SUPERFAMILY SSF54534 42 234 5.29E-59 T 23-10-2018 CDG62_18945 900764faf1c6b02c253497fb151ca3d5 234 Gene3D G3DSA:1.10.287.460 39 95 7.9E-10 T 23-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 CDG62_18945 900764faf1c6b02c253497fb151ca3d5 234 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 144 231 5.5E-30 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG62_18945 900764faf1c6b02c253497fb151ca3d5 234 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 31 136 1.9E-24 T 23-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CDG62_14295 05297d49124d122d8186ea72a1c51af4 148 SUPERFAMILY SSF55729 1 135 5.57E-24 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_14295 05297d49124d122d8186ea72a1c51af4 148 Gene3D G3DSA:3.40.630.30 1 147 3.7E-28 T 23-10-2018 CDG62_14295 05297d49124d122d8186ea72a1c51af4 148 Pfam PF13673 Acetyltransferase (GNAT) domain 54 131 3.4E-17 T 23-10-2018 IPR000182 GNAT domain CDG62_10185 2479b83bc0c59a6a444aeb40c6b678af 206 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 3.9E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_10185 2479b83bc0c59a6a444aeb40c6b678af 206 Gene3D G3DSA:3.30.700.10 7 66 1.8E-7 T 23-10-2018 CDG62_10185 2479b83bc0c59a6a444aeb40c6b678af 206 SUPERFAMILY SSF54523 45 199 1.81E-22 T 23-10-2018 CDG62_10185 2479b83bc0c59a6a444aeb40c6b678af 206 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_10185 2479b83bc0c59a6a444aeb40c6b678af 206 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 2.8E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_10185 2479b83bc0c59a6a444aeb40c6b678af 206 Pfam PF11612 Type II secretion system (T2SS), protein J 59 188 6.6E-13 T 23-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CDG62_10185 2479b83bc0c59a6a444aeb40c6b678af 206 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 6 186 6.1E-20 T 23-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CDG62_15440 058159910e37fd60c23b06831c3198b3 452 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 30 439 7.7E-139 T 23-10-2018 CDG62_15440 058159910e37fd60c23b06831c3198b3 452 Gene3D G3DSA:1.20.1250.20 14 213 5.9E-47 T 23-10-2018 CDG62_15440 058159910e37fd60c23b06831c3198b3 452 SUPERFAMILY SSF103473 14 443 9.42E-84 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_15440 058159910e37fd60c23b06831c3198b3 452 PIRSF PIRSF002808 1 452 3.1E-47 T 23-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 CDG62_15440 058159910e37fd60c23b06831c3198b3 452 Gene3D G3DSA:1.20.1250.20 246 445 1.7E-34 T 23-10-2018 CDG62_15440 058159910e37fd60c23b06831c3198b3 452 Pfam PF07690 Major Facilitator Superfamily 28 404 3.4E-61 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_02490 9c288376b0df6cbfc428e491e5607e61 213 SMART SM00646 70 208 4.1E-6 T 23-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CDG62_02490 9c288376b0df6cbfc428e491e5607e61 213 SUPERFAMILY SSF53187 14 212 8.79E-28 T 23-10-2018 CDG62_02490 9c288376b0df6cbfc428e491e5607e61 213 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 14 208 2.6E-34 T 23-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CDG62_02490 9c288376b0df6cbfc428e491e5607e61 213 Gene3D G3DSA:3.40.630.40 10 213 1.5E-33 T 23-10-2018 CDG62_03235 9520e8a205424f59e3600de46e0c5c5c 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 220 2.6E-25 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_03235 9520e8a205424f59e3600de46e0c5c5c 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 2.9E-20 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CDG62_03235 9520e8a205424f59e3600de46e0c5c5c 229 Gene3D G3DSA:1.10.3720.10 2 224 1.9E-52 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_03235 9520e8a205424f59e3600de46e0c5c5c 229 SUPERFAMILY SSF161098 8 206 4.97E-42 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_15780 a297c5b6fe94c691f547cf7b3b6c11b0 417 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 4 260 6.0E-54 T 23-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 CDG62_15780 a297c5b6fe94c691f547cf7b3b6c11b0 417 Pfam PF00149 Calcineurin-like phosphoesterase 4 234 7.8E-15 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDG62_15780 a297c5b6fe94c691f547cf7b3b6c11b0 417 SUPERFAMILY SSF56300 4 342 1.28E-49 T 23-10-2018 CDG62_15780 a297c5b6fe94c691f547cf7b3b6c11b0 417 Gene3D G3DSA:3.60.21.10 1 279 4.3E-74 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like CDG62_15780 a297c5b6fe94c691f547cf7b3b6c11b0 417 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 289 388 2.7E-9 T 23-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CDG62_12755 90ea2c6ad2bb9b9f4ad371aa965b723d 194 ProSitePatterns PS00213 Lipocalin signature. 45 56 - T 23-10-2018 IPR022272 Lipocalin family conserved site CDG62_12755 90ea2c6ad2bb9b9f4ad371aa965b723d 194 PRINTS PR01171 Bacterial lipocalin signature 180 190 2.3E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG62_12755 90ea2c6ad2bb9b9f4ad371aa965b723d 194 PRINTS PR01171 Bacterial lipocalin signature 44 58 2.3E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG62_12755 90ea2c6ad2bb9b9f4ad371aa965b723d 194 PRINTS PR01171 Bacterial lipocalin signature 81 90 2.3E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG62_12755 90ea2c6ad2bb9b9f4ad371aa965b723d 194 PRINTS PR01171 Bacterial lipocalin signature 153 164 2.3E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG62_12755 90ea2c6ad2bb9b9f4ad371aa965b723d 194 Gene3D G3DSA:2.40.128.20 25 192 1.0E-49 T 23-10-2018 IPR012674 Calycin CDG62_12755 90ea2c6ad2bb9b9f4ad371aa965b723d 194 PIRSF PIRSF036893 8 194 8.9E-57 T 23-10-2018 IPR022271 Lipocalin, ApoD type CDG62_12755 90ea2c6ad2bb9b9f4ad371aa965b723d 194 SUPERFAMILY SSF50814 35 192 1.4E-44 T 23-10-2018 IPR012674 Calycin CDG62_12755 90ea2c6ad2bb9b9f4ad371aa965b723d 194 Pfam PF08212 Lipocalin-like domain 44 191 2.6E-48 T 23-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CDG62_09120 b3ce4c6d3eaa6255b7704f0850485d4e 259 Gene3D G3DSA:3.40.30.10 31 134 1.8E-19 T 23-10-2018 CDG62_09120 b3ce4c6d3eaa6255b7704f0850485d4e 259 SUPERFAMILY SSF52833 161 257 9.1E-10 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_09120 b3ce4c6d3eaa6255b7704f0850485d4e 259 Gene3D G3DSA:3.40.30.10 159 259 5.0E-16 T 23-10-2018 CDG62_09120 b3ce4c6d3eaa6255b7704f0850485d4e 259 SUPERFAMILY SSF52833 35 133 1.85E-20 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_09120 b3ce4c6d3eaa6255b7704f0850485d4e 259 Pfam PF13417 Glutathione S-transferase, N-terminal domain 162 258 1.0E-11 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG62_09120 b3ce4c6d3eaa6255b7704f0850485d4e 259 Pfam PF13417 Glutathione S-transferase, N-terminal domain 38 113 1.2E-18 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG62_11160 65f6ff7a2a2fecd7c17a05bcf1915cef 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.1E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11160 65f6ff7a2a2fecd7c17a05bcf1915cef 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.1E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11160 65f6ff7a2a2fecd7c17a05bcf1915cef 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.1E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11160 65f6ff7a2a2fecd7c17a05bcf1915cef 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.6E-24 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11160 65f6ff7a2a2fecd7c17a05bcf1915cef 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.6E-24 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11160 65f6ff7a2a2fecd7c17a05bcf1915cef 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.6E-24 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11160 65f6ff7a2a2fecd7c17a05bcf1915cef 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.6E-24 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11160 65f6ff7a2a2fecd7c17a05bcf1915cef 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.6E-24 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11160 65f6ff7a2a2fecd7c17a05bcf1915cef 278 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 193 0.0015 T 23-10-2018 CDG62_11160 65f6ff7a2a2fecd7c17a05bcf1915cef 278 Gene3D G3DSA:3.40.50.720 1 276 5.5E-72 T 23-10-2018 CDG62_11160 65f6ff7a2a2fecd7c17a05bcf1915cef 278 Pfam PF00106 short chain dehydrogenase 7 199 9.7E-51 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11160 65f6ff7a2a2fecd7c17a05bcf1915cef 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG62_11160 65f6ff7a2a2fecd7c17a05bcf1915cef 278 SUPERFAMILY SSF51735 1 271 3.82E-67 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 411 438 8.1E-8 T 23-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 321 3.1E-125 T 23-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 Hamap MF_01588 DNA ligase [ligA]. 8 671 50.301 T 23-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 15 667 2.8E-243 T 23-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 SUPERFAMILY SSF50249 323 402 2.91E-26 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 599 670 8.6E-11 T 23-10-2018 IPR001357 BRCT domain CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 SUPERFAMILY SSF52113 595 672 3.55E-17 T 23-10-2018 IPR036420 BRCT domain superfamily CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 SMART SM00292 597 674 4.3E-10 T 23-10-2018 IPR001357 BRCT domain CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 SMART SM00532 6 452 5.6E-241 T 23-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 Gene3D G3DSA:2.20.70.80 397 434 9.3E-14 T 23-10-2018 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 Gene3D G3DSA:3.40.50.10190 592 674 1.5E-25 T 23-10-2018 IPR036420 BRCT domain superfamily CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 Pfam PF12826 Helix-hairpin-helix motif 517 578 1.0E-20 T 23-10-2018 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 Gene3D G3DSA:1.10.150.20 512 591 4.4E-27 T 23-10-2018 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 SUPERFAMILY SSF47781 408 589 2.48E-60 T 23-10-2018 IPR010994 RuvA domain 2-like CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 Gene3D G3DSA:3.30.470.90 74 321 4.2E-98 T 23-10-2018 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 SUPERFAMILY SSF56091 7 320 1.11E-113 T 23-10-2018 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 PIRSF PIRSF001604 1 676 4.0E-241 T 23-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 335 350 - T 23-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 117 146 - T 23-10-2018 IPR018239 NAD-dependent DNA ligase, active site CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 Gene3D G3DSA:1.10.287.610 2 73 6.3E-24 T 23-10-2018 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 Gene3D G3DSA:1.10.150.20 436 511 7.7E-27 T 23-10-2018 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 326 400 2.5E-32 T 23-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 Gene3D G3DSA:2.40.50.140 322 394 1.6E-32 T 23-10-2018 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 SMART SM00278 450 469 1900.0 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 SMART SM00278 550 569 360.0 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 SMART SM00278 518 537 13.0 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 SMART SM00278 486 505 14.0 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG62_06220 ce936f570b2c049ce47ad259331b4037 679 Pfam PF14520 Helix-hairpin-helix domain 450 506 0.0011 T 23-10-2018 CDG62_07375 79f386d4a2baa06eae0b9e39cdaacce7 206 SUPERFAMILY SSF46609 1 90 2.75E-35 T 23-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07375 79f386d4a2baa06eae0b9e39cdaacce7 206 Gene3D G3DSA:2.40.500.20 90 206 5.4E-47 T 23-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07375 79f386d4a2baa06eae0b9e39cdaacce7 206 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.4E-26 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07375 79f386d4a2baa06eae0b9e39cdaacce7 206 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.4E-26 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07375 79f386d4a2baa06eae0b9e39cdaacce7 206 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 1.4E-26 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07375 79f386d4a2baa06eae0b9e39cdaacce7 206 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 1.4E-26 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07375 79f386d4a2baa06eae0b9e39cdaacce7 206 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 1.4E-26 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07375 79f386d4a2baa06eae0b9e39cdaacce7 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 23-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07375 79f386d4a2baa06eae0b9e39cdaacce7 206 Gene3D G3DSA:1.10.287.990 20 89 1.7E-26 T 23-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07375 79f386d4a2baa06eae0b9e39cdaacce7 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 88 2.2E-31 T 23-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07375 79f386d4a2baa06eae0b9e39cdaacce7 206 PIRSF PIRSF000349 1 206 1.4E-80 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07375 79f386d4a2baa06eae0b9e39cdaacce7 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 8.8E-39 T 23-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07375 79f386d4a2baa06eae0b9e39cdaacce7 206 SUPERFAMILY SSF54719 92 202 3.67E-45 T 23-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_12290 a2c435914c7b35b9b649163a83932129 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 267 3.2E-17 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_12290 a2c435914c7b35b9b649163a83932129 305 SUPERFAMILY SSF161098 51 267 6.15E-40 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_12290 a2c435914c7b35b9b649163a83932129 305 Gene3D G3DSA:1.10.3720.10 46 276 2.0E-50 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_12290 a2c435914c7b35b9b649163a83932129 305 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 51 167 2.3E-17 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CDG62_04085 1946434b5cab295e2e7e9cab494b71f3 295 Gene3D G3DSA:3.40.50.720 3 265 1.7E-65 T 23-10-2018 CDG62_04085 1946434b5cab295e2e7e9cab494b71f3 295 Pfam PF00106 short chain dehydrogenase 16 205 1.8E-53 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04085 1946434b5cab295e2e7e9cab494b71f3 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.1E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04085 1946434b5cab295e2e7e9cab494b71f3 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.1E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04085 1946434b5cab295e2e7e9cab494b71f3 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 1.1E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04085 1946434b5cab295e2e7e9cab494b71f3 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.1E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04085 1946434b5cab295e2e7e9cab494b71f3 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.1E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04085 1946434b5cab295e2e7e9cab494b71f3 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 8.8E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04085 1946434b5cab295e2e7e9cab494b71f3 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 8.8E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04085 1946434b5cab295e2e7e9cab494b71f3 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 8.8E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04085 1946434b5cab295e2e7e9cab494b71f3 295 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 16 196 5.2E-4 T 23-10-2018 CDG62_04085 1946434b5cab295e2e7e9cab494b71f3 295 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG62_04085 1946434b5cab295e2e7e9cab494b71f3 295 SUPERFAMILY SSF51735 12 233 8.05E-63 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_11640 fd6fe212776e3134b57133a199cba5b5 122 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 122 2.0E-34 T 23-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CDG62_11640 fd6fe212776e3134b57133a199cba5b5 122 Gene3D G3DSA:3.40.1260.10 1 122 6.6E-36 T 23-10-2018 IPR027396 DsrEFH-like CDG62_11640 fd6fe212776e3134b57133a199cba5b5 122 SUPERFAMILY SSF75169 1 122 5.63E-28 T 23-10-2018 IPR027396 DsrEFH-like CDG62_11640 fd6fe212776e3134b57133a199cba5b5 122 Pfam PF02635 DsrE/DsrF-like family 1 122 7.9E-19 T 23-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein CDG62_10020 2000d38e09c5b303198e63cf62056382 323 Pfam PF12146 Serine aminopeptidase, S33 48 252 7.3E-20 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG62_10020 2000d38e09c5b303198e63cf62056382 323 Gene3D G3DSA:3.40.50.1820 19 322 6.6E-41 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_10020 2000d38e09c5b303198e63cf62056382 323 SUPERFAMILY SSF53474 48 319 2.08E-28 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 Gene3D G3DSA:1.10.8.60 356 437 3.1E-30 T 23-10-2018 CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 SMART SM00382 486 653 4.4E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 SMART SM00382 206 352 3.7E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 Gene3D G3DSA:3.40.50.300 438 650 7.4E-79 T 23-10-2018 CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 734 0.0 T 23-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 732 1.6E-23 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 645 4.7E-47 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 23-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 SUPERFAMILY SSF81923 1 141 1.96E-48 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 SUPERFAMILY SSF52540 436 728 7.3E-76 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 Gene3D G3DSA:1.10.1780.10 1 143 2.8E-38 T 23-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.3E-37 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.3E-37 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.3E-37 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.3E-37 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 SUPERFAMILY SSF52540 169 421 7.47E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 Gene3D G3DSA:3.40.50.300 167 355 3.9E-64 T 23-10-2018 CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 Gene3D G3DSA:1.10.8.60 652 755 2.1E-28 T 23-10-2018 CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 305 7.2E-13 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 3.7E-14 T 23-10-2018 IPR004176 Clp, N-terminal CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 SMART SM01086 652 744 2.4E-27 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG62_09345 a942670c8c6cef5325c2e02d364465b8 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 23-10-2018 IPR028299 ClpA/B, conserved site 2 CDG62_13655 c8b71c82f4fc0149b04b7eb74b67a977 298 Gene3D G3DSA:3.40.190.290 91 295 2.9E-54 T 23-10-2018 CDG62_13655 c8b71c82f4fc0149b04b7eb74b67a977 298 Pfam PF03466 LysR substrate binding domain 89 295 6.7E-36 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_13655 c8b71c82f4fc0149b04b7eb74b67a977 298 SUPERFAMILY SSF53850 90 297 5.61E-37 T 23-10-2018 CDG62_13655 c8b71c82f4fc0149b04b7eb74b67a977 298 Gene3D G3DSA:1.10.10.10 2 87 6.3E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_13655 c8b71c82f4fc0149b04b7eb74b67a977 298 SUPERFAMILY SSF46785 3 82 4.59E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_13655 c8b71c82f4fc0149b04b7eb74b67a977 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.5E-16 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 221 818 4.6E-177 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 Gene3D G3DSA:3.30.70.100 12 77 9.6E-22 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 PRINTS PR00943 Copper-transporting ATPase signature 296 314 8.7E-12 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 PRINTS PR00943 Copper-transporting ATPase signature 121 141 8.7E-12 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 PRINTS PR00943 Copper-transporting ATPase signature 429 443 8.7E-12 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 PRINTS PR00943 Copper-transporting ATPase signature 276 295 8.7E-12 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 PRINTS PR00943 Copper-transporting ATPase signature 781 795 8.7E-12 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 PRINTS PR00943 Copper-transporting ATPase signature 685 702 8.7E-12 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 SUPERFAMILY SSF81653 310 406 5.89E-29 T 23-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 SUPERFAMILY SSF55008 80 145 6.28E-21 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 Gene3D G3DSA:3.40.50.1000 489 760 1.3E-91 T 23-10-2018 IPR023214 HAD superfamily CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 SUPERFAMILY SSF56784 506 815 5.5E-61 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 510 516 - T 23-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 239 817 9.1E-188 T 23-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 Pfam PF00702 haloacid dehalogenase-like hydrolase 505 722 2.3E-43 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 SUPERFAMILY SSF81665 255 775 4.58E-13 T 23-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 Pfam PF00403 Heavy-metal-associated domain 83 140 4.0E-17 T 23-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 Pfam PF00403 Heavy-metal-associated domain 15 75 4.1E-15 T 23-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 81 141 1.1E-11 T 23-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 13 76 2.5E-13 T 23-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 Gene3D G3DSA:3.40.1110.10 519 640 1.3E-91 T 23-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 Pfam PF00122 E1-E2 ATPase 307 486 4.4E-56 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 SUPERFAMILY SSF55008 9 76 6.54E-21 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 Gene3D G3DSA:2.70.150.20 299 411 4.3E-41 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 278 787 1.2E-91 T 23-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 ProSitePatterns PS01047 Heavy-metal-associated domain. 18 47 - T 23-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 ProSitePatterns PS01047 Heavy-metal-associated domain. 85 114 - T 23-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 708 727 2.1E-29 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 655 665 2.1E-29 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 731 743 2.1E-29 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 356 370 2.1E-29 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 633 644 2.1E-29 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 522 2.1E-29 T 23-10-2018 CDG62_01310 f6c0991a9f115c146e6b621e6430f39b 828 Gene3D G3DSA:3.30.70.100 81 144 4.4E-23 T 23-10-2018 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 Pfam PF00330 Aconitase family (aconitate hydratase) 477 827 1.2E-38 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 Gene3D G3DSA:1.25.40.310 1 160 8.9E-67 T 23-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 Gene3D G3DSA:3.30.499.10 691 874 1.9E-67 T 23-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 ProSitePatterns PS00450 Aconitase family signature 1. 710 727 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 Pfam PF11791 Aconitate B N-terminal domain 4 156 7.5E-66 T 23-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 Gene3D G3DSA:3.40.1060.10 387 689 8.4E-145 T 23-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 862 0.0 T 23-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 384 1.7E-90 T 23-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 SUPERFAMILY SSF74778 2 159 3.27E-67 T 23-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 Gene3D G3DSA:3.30.499.10 407 534 8.4E-145 T 23-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 Gene3D G3DSA:3.20.19.10 162 363 2.5E-71 T 23-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 SUPERFAMILY SSF53732 381 866 1.44E-143 T 23-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 SUPERFAMILY SSF52016 162 374 4.32E-63 T 23-10-2018 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 ProSitePatterns PS01244 Aconitase family signature 2. 770 783 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDG62_08890 aaf09489fbcedf9212f69ce2b663e37b 879 PIRSF PIRSF036687 1 868 0.0 T 23-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CDG62_15940 feb36c4fddd395071053afc828dba83c 348 SMART SM00342 253 332 1.6E-9 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_15940 feb36c4fddd395071053afc828dba83c 348 Pfam PF12833 Helix-turn-helix domain 257 333 3.3E-12 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_15940 feb36c4fddd395071053afc828dba83c 348 Gene3D G3DSA:1.10.10.60 231 339 2.7E-16 T 23-10-2018 CDG62_15940 feb36c4fddd395071053afc828dba83c 348 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 206 6.2E-33 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG62_15940 feb36c4fddd395071053afc828dba83c 348 SUPERFAMILY SSF46689 286 335 5.38E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_13905 d47842637c82b7b00ee4c13dd1e08039 236 PIRSF PIRSF001435 9 220 2.4E-51 T 23-10-2018 CDG62_13905 d47842637c82b7b00ee4c13dd1e08039 236 SMART SM00478 49 196 1.1E-53 T 23-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CDG62_13905 d47842637c82b7b00ee4c13dd1e08039 236 Gene3D G3DSA:1.10.1670.10 22 214 6.4E-75 T 23-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CDG62_13905 d47842637c82b7b00ee4c13dd1e08039 236 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 198 214 - T 23-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CDG62_13905 d47842637c82b7b00ee4c13dd1e08039 236 Gene3D G3DSA:1.10.340.30 32 143 6.4E-75 T 23-10-2018 CDG62_13905 d47842637c82b7b00ee4c13dd1e08039 236 Hamap MF_00942 Endonuclease III [nth]. 9 220 36.664 T 23-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CDG62_13905 d47842637c82b7b00ee4c13dd1e08039 236 TIGRFAM TIGR01083 nth: endonuclease III 15 205 3.2E-82 T 23-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CDG62_13905 d47842637c82b7b00ee4c13dd1e08039 236 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 45 179 4.4E-17 T 23-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CDG62_13905 d47842637c82b7b00ee4c13dd1e08039 236 ProSitePatterns PS01155 Endonuclease III family signature. 113 142 - T 23-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CDG62_13905 d47842637c82b7b00ee4c13dd1e08039 236 SUPERFAMILY SSF48150 14 217 2.98E-70 T 23-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CDG62_13905 d47842637c82b7b00ee4c13dd1e08039 236 Pfam PF00633 Helix-hairpin-helix motif 111 138 8.9E-9 T 23-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CDG62_13905 d47842637c82b7b00ee4c13dd1e08039 236 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 198 214 1.3E-5 T 23-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CDG62_18930 3bc622fbd3201685d8ae83792639d8a6 366 Gene3D G3DSA:3.10.560.10 56 336 1.9E-75 T 23-10-2018 CDG62_18930 3bc622fbd3201685d8ae83792639d8a6 366 Gene3D G3DSA:3.10.560.10 60 251 1.9E-75 T 23-10-2018 CDG62_18930 3bc622fbd3201685d8ae83792639d8a6 366 Pfam PF02563 Polysaccharide biosynthesis/export protein 75 161 1.1E-20 T 23-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CDG62_18930 3bc622fbd3201685d8ae83792639d8a6 366 Gene3D G3DSA:3.30.1950.10 81 165 1.9E-75 T 23-10-2018 CDG62_05325 44f1242812ce02cfb480a3d7612a7660 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 6 362 34.188 T 23-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CDG62_05325 44f1242812ce02cfb480a3d7612a7660 373 Pfam PF04551 GcpE protein 11 352 6.3E-132 T 23-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CDG62_05325 44f1242812ce02cfb480a3d7612a7660 373 Gene3D G3DSA:3.20.20.20 1 260 2.5E-102 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_05325 44f1242812ce02cfb480a3d7612a7660 373 SUPERFAMILY SSF51604 21 137 2.75E-7 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CDG62_05325 44f1242812ce02cfb480a3d7612a7660 373 SUPERFAMILY SSF56014 264 352 7.36E-14 T 23-10-2018 CDG62_05325 44f1242812ce02cfb480a3d7612a7660 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 8 351 1.9E-126 T 23-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CDG62_05325 44f1242812ce02cfb480a3d7612a7660 373 PIRSF PIRSF004640 1 362 2.6E-145 T 23-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CDG62_05325 44f1242812ce02cfb480a3d7612a7660 373 Gene3D G3DSA:3.30.413.10 261 360 2.9E-27 T 23-10-2018 CDG62_07050 ebf9cbe0ade242002269e7c734f710f2 216 Pfam PF01728 FtsJ-like methyltransferase 35 210 2.2E-58 T 23-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CDG62_07050 ebf9cbe0ade242002269e7c734f710f2 216 PIRSF PIRSF005461 3 216 4.4E-80 T 23-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 CDG62_07050 ebf9cbe0ade242002269e7c734f710f2 216 SUPERFAMILY SSF53335 34 212 2.71E-41 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_07050 ebf9cbe0ade242002269e7c734f710f2 216 Gene3D G3DSA:3.40.50.150 31 215 3.3E-61 T 23-10-2018 CDG62_07050 ebf9cbe0ade242002269e7c734f710f2 216 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 19 212 30.859 T 23-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 CDG62_18800 50b860fdb3c08d3a3061ad05273fbef0 221 Pfam PF02677 Uncharacterized BCR, COG1636 18 192 1.9E-63 T 23-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 CDG62_18800 50b860fdb3c08d3a3061ad05273fbef0 221 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 18 194 32.971 T 23-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 CDG62_04060 8039cb5744e00d93bf1f7ec2bb3db2dc 486 SMART SM00388 260 319 1.2E-7 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_04060 8039cb5744e00d93bf1f7ec2bb3db2dc 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 461 2.9E-19 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_04060 8039cb5744e00d93bf1f7ec2bb3db2dc 486 Gene3D G3DSA:1.10.287.130 203 314 7.5E-20 T 23-10-2018 CDG62_04060 8039cb5744e00d93bf1f7ec2bb3db2dc 486 SUPERFAMILY SSF47384 244 317 5.49E-12 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG62_04060 8039cb5744e00d93bf1f7ec2bb3db2dc 486 SMART SM00387 355 463 5.1E-26 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_04060 8039cb5744e00d93bf1f7ec2bb3db2dc 486 SMART SM00304 206 259 1.1E-4 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDG62_04060 8039cb5744e00d93bf1f7ec2bb3db2dc 486 Gene3D G3DSA:3.30.565.10 321 471 1.3E-32 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_04060 8039cb5744e00d93bf1f7ec2bb3db2dc 486 SUPERFAMILY SSF55874 316 465 1.05E-33 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_04060 8039cb5744e00d93bf1f7ec2bb3db2dc 486 Pfam PF00672 HAMP domain 206 251 2.7E-7 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDG62_04060 8039cb5744e00d93bf1f7ec2bb3db2dc 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 5.8E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_04060 8039cb5744e00d93bf1f7ec2bb3db2dc 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 5.8E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_04060 8039cb5744e00d93bf1f7ec2bb3db2dc 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 5.8E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_04060 8039cb5744e00d93bf1f7ec2bb3db2dc 486 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 313 8.5E-8 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_12830 e402332cf619a468c40a168eafab0da5 236 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 227 1.5E-13 T 23-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CDG62_12830 e402332cf619a468c40a168eafab0da5 236 SUPERFAMILY SSF50249 2 68 4.63E-6 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_12830 e402332cf619a468c40a168eafab0da5 236 Gene3D G3DSA:1.20.1440.120 73 236 3.3E-41 T 23-10-2018 CDG62_12830 e402332cf619a468c40a168eafab0da5 236 Pfam PF11967 Recombination protein O N terminal 2 67 5.0E-9 T 23-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal CDG62_12830 e402332cf619a468c40a168eafab0da5 236 Pfam PF02565 Recombination protein O C terminal 76 226 3.2E-15 T 23-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CDG62_12830 e402332cf619a468c40a168eafab0da5 236 Gene3D G3DSA:2.40.50.140 3 68 2.4E-10 T 23-10-2018 CDG62_07535 c478505d3ce9865b4d1fb650a99766c8 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 257 3.3E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_07535 c478505d3ce9865b4d1fb650a99766c8 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 273 3.3E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_07535 c478505d3ce9865b4d1fb650a99766c8 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 228 269 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDG62_07535 c478505d3ce9865b4d1fb650a99766c8 277 SUPERFAMILY SSF51215 31 157 3.4E-20 T 23-10-2018 IPR037923 Transcription regulator HTH-like CDG62_07535 c478505d3ce9865b4d1fb650a99766c8 277 SMART SM00342 191 273 2.1E-26 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_07535 c478505d3ce9865b4d1fb650a99766c8 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 176 220 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDG62_07535 c478505d3ce9865b4d1fb650a99766c8 277 SUPERFAMILY SSF46689 228 274 2.6E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_07535 c478505d3ce9865b4d1fb650a99766c8 277 Pfam PF12833 Helix-turn-helix domain 197 274 5.9E-21 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_07535 c478505d3ce9865b4d1fb650a99766c8 277 Pfam PF02311 AraC-like ligand binding domain 23 150 4.9E-22 T 23-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CDG62_07535 c478505d3ce9865b4d1fb650a99766c8 277 Gene3D G3DSA:1.10.10.60 171 226 1.5E-14 T 23-10-2018 CDG62_07535 c478505d3ce9865b4d1fb650a99766c8 277 Gene3D G3DSA:1.10.10.60 227 276 2.0E-13 T 23-10-2018 CDG62_07535 c478505d3ce9865b4d1fb650a99766c8 277 SUPERFAMILY SSF46689 176 225 1.61E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_03070 58d886321bfdffd1924e048ac42bea82 319 Pfam PF02911 Formyl transferase, C-terminal domain 211 310 5.0E-24 T 23-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG62_03070 58d886321bfdffd1924e048ac42bea82 319 Pfam PF00551 Formyl transferase 2 185 9.9E-47 T 23-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG62_03070 58d886321bfdffd1924e048ac42bea82 319 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 313 7.4E-92 T 23-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CDG62_03070 58d886321bfdffd1924e048ac42bea82 319 Gene3D G3DSA:3.10.25.10 214 318 5.1E-27 T 23-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG62_03070 58d886321bfdffd1924e048ac42bea82 319 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 314 34.929 T 23-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CDG62_03070 58d886321bfdffd1924e048ac42bea82 319 SUPERFAMILY SSF50486 212 319 2.16E-26 T 23-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 CDG62_03070 58d886321bfdffd1924e048ac42bea82 319 SUPERFAMILY SSF53328 2 186 1.19E-60 T 23-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG62_03070 58d886321bfdffd1924e048ac42bea82 319 Gene3D G3DSA:3.40.50.170 1 213 1.7E-76 T 23-10-2018 CDG62_10035 5e746b72332b9a8b6839a42309cca1bf 571 SUPERFAMILY SSF52540 3 178 4.02E-27 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10035 5e746b72332b9a8b6839a42309cca1bf 571 Gene3D G3DSA:3.40.50.300 1 192 5.7E-35 T 23-10-2018 CDG62_10035 5e746b72332b9a8b6839a42309cca1bf 571 SMART SM00382 12 168 2.7E-5 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_10035 5e746b72332b9a8b6839a42309cca1bf 571 SUPERFAMILY SSF52540 125 406 7.3E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10035 5e746b72332b9a8b6839a42309cca1bf 571 Pfam PF14493 Helix-turn-helix domain 467 567 2.0E-16 T 23-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CDG62_10035 5e746b72332b9a8b6839a42309cca1bf 571 Gene3D G3DSA:3.40.50.300 193 399 3.5E-5 T 23-10-2018 CDG62_10035 5e746b72332b9a8b6839a42309cca1bf 571 Pfam PF05970 PIF1-like helicase 194 297 5.2E-7 T 23-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 CDG62_10035 5e746b72332b9a8b6839a42309cca1bf 571 Pfam PF05970 PIF1-like helicase 11 182 3.7E-38 T 23-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 CDG62_06245 fa17c307a96bc87e68860f0f0a03fb5d 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 5.7E-46 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_06245 fa17c307a96bc87e68860f0f0a03fb5d 154 Pfam PF00210 Ferritin-like domain 9 143 8.0E-35 T 23-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CDG62_06245 fa17c307a96bc87e68860f0f0a03fb5d 154 PIRSF PIRSF002560 1 154 1.3E-59 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_06245 fa17c307a96bc87e68860f0f0a03fb5d 154 PRINTS PR00601 Bacterioferritin signature 3 22 3.9E-40 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_06245 fa17c307a96bc87e68860f0f0a03fb5d 154 PRINTS PR00601 Bacterioferritin signature 23 43 3.9E-40 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_06245 fa17c307a96bc87e68860f0f0a03fb5d 154 PRINTS PR00601 Bacterioferritin signature 85 105 3.9E-40 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_06245 fa17c307a96bc87e68860f0f0a03fb5d 154 PRINTS PR00601 Bacterioferritin signature 44 64 3.9E-40 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_06245 fa17c307a96bc87e68860f0f0a03fb5d 154 PRINTS PR00601 Bacterioferritin signature 106 126 3.9E-40 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_06245 fa17c307a96bc87e68860f0f0a03fb5d 154 PRINTS PR00601 Bacterioferritin signature 128 149 3.9E-40 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_06245 fa17c307a96bc87e68860f0f0a03fb5d 154 Gene3D G3DSA:1.20.1260.10 1 154 5.0E-59 T 23-10-2018 IPR012347 Ferritin-like CDG62_06245 fa17c307a96bc87e68860f0f0a03fb5d 154 SUPERFAMILY SSF47240 1 154 3.1E-47 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG62_16745 7611bf4586bf7e5983a0c0248c725cb8 692 Pfam PF00563 EAL domain 439 674 1.8E-69 T 23-10-2018 IPR001633 EAL domain CDG62_16745 7611bf4586bf7e5983a0c0248c725cb8 692 Gene3D G3DSA:3.30.70.270 256 435 3.0E-50 T 23-10-2018 CDG62_16745 7611bf4586bf7e5983a0c0248c725cb8 692 SUPERFAMILY SSF141868 439 684 2.48E-84 T 23-10-2018 IPR035919 EAL domain superfamily CDG62_16745 7611bf4586bf7e5983a0c0248c725cb8 692 SMART SM00052 433 679 4.2E-102 T 23-10-2018 IPR001633 EAL domain CDG62_16745 7611bf4586bf7e5983a0c0248c725cb8 692 Pfam PF00990 Diguanylate cyclase, GGDEF domain 262 418 4.4E-41 T 23-10-2018 IPR000160 GGDEF domain CDG62_16745 7611bf4586bf7e5983a0c0248c725cb8 692 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 421 2.5E-39 T 23-10-2018 IPR000160 GGDEF domain CDG62_16745 7611bf4586bf7e5983a0c0248c725cb8 692 Gene3D G3DSA:3.20.20.450 436 687 4.4E-94 T 23-10-2018 IPR035919 EAL domain superfamily CDG62_16745 7611bf4586bf7e5983a0c0248c725cb8 692 SMART SM00267 251 422 1.5E-53 T 23-10-2018 IPR000160 GGDEF domain CDG62_16745 7611bf4586bf7e5983a0c0248c725cb8 692 SUPERFAMILY SSF55073 267 423 7.85E-44 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_16745 7611bf4586bf7e5983a0c0248c725cb8 692 Pfam PF03707 Bacterial signalling protein N terminal repeat 186 238 5.0E-6 T 23-10-2018 IPR005330 MHYT domain CDG62_16745 7611bf4586bf7e5983a0c0248c725cb8 692 Pfam PF03707 Bacterial signalling protein N terminal repeat 54 110 2.5E-16 T 23-10-2018 IPR005330 MHYT domain CDG62_16745 7611bf4586bf7e5983a0c0248c725cb8 692 Pfam PF03707 Bacterial signalling protein N terminal repeat 116 168 1.5E-14 T 23-10-2018 IPR005330 MHYT domain CDG62_08135 7428f7e0c92968ae6475147178a6cdb9 330 SMART SM00876 220 312 1.7E-39 T 23-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG62_08135 7428f7e0c92968ae6475147178a6cdb9 330 Hamap MF_01694 Biotin synthase [bioB]. 5 313 42.238 T 23-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG62_08135 7428f7e0c92968ae6475147178a6cdb9 330 PIRSF PIRSF001619 1 318 2.0E-137 T 23-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG62_08135 7428f7e0c92968ae6475147178a6cdb9 330 Gene3D G3DSA:3.20.20.70 4 315 2.1E-128 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_08135 7428f7e0c92968ae6475147178a6cdb9 330 Pfam PF04055 Radical SAM superfamily 50 206 1.3E-13 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG62_08135 7428f7e0c92968ae6475147178a6cdb9 330 SMART SM00729 43 250 4.6E-37 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG62_08135 7428f7e0c92968ae6475147178a6cdb9 330 SUPERFAMILY SSF102114 5 310 2.62E-87 T 23-10-2018 CDG62_08135 7428f7e0c92968ae6475147178a6cdb9 330 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 5.6E-18 T 23-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG62_08135 7428f7e0c92968ae6475147178a6cdb9 330 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 1.5E-122 T 23-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG62_09230 98d19a161dc1a7babeab3d40da49efee 686 ProSitePatterns PS01303 BCCT family of transporters signature. 325 334 - T 23-10-2018 IPR018093 BCCT transporter, conserved site CDG62_09230 98d19a161dc1a7babeab3d40da49efee 686 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 24 509 7.2E-178 T 23-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 CDG62_09230 98d19a161dc1a7babeab3d40da49efee 686 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 62 509 6.6E-171 T 23-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 CDG62_01305 fe52c0914437295ffe2a2f213d2dc629 89 Gene3D G3DSA:1.10.10.10 1 89 3.6E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_01305 fe52c0914437295ffe2a2f213d2dc629 89 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 3.4E-10 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_01305 fe52c0914437295ffe2a2f213d2dc629 89 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 3.4E-10 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_01305 fe52c0914437295ffe2a2f213d2dc629 89 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 3.4E-10 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_01305 fe52c0914437295ffe2a2f213d2dc629 89 Pfam PF01022 Bacterial regulatory protein, arsR family 13 57 4.1E-12 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_01305 fe52c0914437295ffe2a2f213d2dc629 89 SUPERFAMILY SSF46785 1 85 4.65E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_01305 fe52c0914437295ffe2a2f213d2dc629 89 SMART SM00418 5 83 5.8E-21 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 6.7E-35 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 6.7E-35 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 6.7E-35 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 6.7E-35 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 Pfam PF00206 Lyase 11 341 2.2E-116 T 23-10-2018 IPR022761 Fumarate lyase, N-terminal CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 Gene3D G3DSA:1.10.40.30 406 463 6.6E-28 T 23-10-2018 CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 460 4.5E-231 T 23-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 Gene3D G3DSA:1.10.275.10 4 137 2.3E-58 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 Pfam PF10415 Fumarase C C-terminus 407 459 3.4E-26 T 23-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 Gene3D G3DSA:1.20.200.10 138 405 3.4E-118 T 23-10-2018 CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 90.948 T 23-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 SUPERFAMILY SSF48557 3 461 3.3E-160 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 23-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 9.8E-5 T 23-10-2018 CDG62_11495 80623c1f3a1e98a17eb010d104afc072 464 PRINTS PR00145 Argininosuccinate lyase family signature 316 332 9.8E-5 T 23-10-2018 CDG62_04340 5e7c1c3b6175557eb0c90de0e834fb59 246 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 225 6.2E-55 T 23-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDG62_04340 5e7c1c3b6175557eb0c90de0e834fb59 246 PIRSF PIRSF000386 1 245 6.4E-90 T 23-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDG62_04340 5e7c1c3b6175557eb0c90de0e834fb59 246 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 246 102.65 T 23-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDG62_04340 5e7c1c3b6175557eb0c90de0e834fb59 246 Gene3D G3DSA:3.40.1280.10 1 169 2.0E-62 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG62_04340 5e7c1c3b6175557eb0c90de0e834fb59 246 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 239 4.9E-91 T 23-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDG62_04340 5e7c1c3b6175557eb0c90de0e834fb59 246 Gene3D G3DSA:1.10.1270.20 170 246 3.0E-30 T 23-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CDG62_04340 5e7c1c3b6175557eb0c90de0e834fb59 246 SUPERFAMILY SSF75217 1 244 1.5E-95 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG62_19225 398a5ff9b02eebd52d7aa1ee34592504 88 Gene3D G3DSA:1.20.58.1000 1 88 2.8E-24 T 23-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily CDG62_19225 398a5ff9b02eebd52d7aa1ee34592504 88 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 1.1E-21 T 23-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CDG62_11850 96926467a78b7dceff58760c82d81756 157 Gene3D G3DSA:3.30.460.10 5 157 6.7E-20 T 23-10-2018 CDG62_11850 96926467a78b7dceff58760c82d81756 157 SUPERFAMILY SSF81301 7 156 3.11E-27 T 23-10-2018 CDG62_11850 96926467a78b7dceff58760c82d81756 157 Pfam PF04229 GrpB protein 7 155 1.2E-21 T 23-10-2018 IPR007344 GrpB/Dephospho-CoA kinase CDG62_16850 82d26528fff6d3685448933e98ed3bde 443 SUPERFAMILY SSF54534 130 245 8.05E-33 T 23-10-2018 CDG62_16850 82d26528fff6d3685448933e98ed3bde 443 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 234 5.6E-16 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG62_16850 82d26528fff6d3685448933e98ed3bde 443 Hamap MF_00303 Trigger factor [tig]. 1 424 21.284 T 23-10-2018 IPR005215 Trigger factor GO:0015031 CDG62_16850 82d26528fff6d3685448933e98ed3bde 443 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 3.5E-40 T 23-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CDG62_16850 82d26528fff6d3685448933e98ed3bde 443 Gene3D G3DSA:3.30.70.1050 1 114 1.3E-34 T 23-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 CDG62_16850 82d26528fff6d3685448933e98ed3bde 443 Gene3D G3DSA:3.10.50.40 148 244 5.3E-94 T 23-10-2018 CDG62_16850 82d26528fff6d3685448933e98ed3bde 443 SUPERFAMILY SSF102735 1 126 1.57E-34 T 23-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 CDG62_16850 82d26528fff6d3685448933e98ed3bde 443 PIRSF PIRSF003095 1 440 9.1E-125 T 23-10-2018 IPR005215 Trigger factor GO:0015031 CDG62_16850 82d26528fff6d3685448933e98ed3bde 443 TIGRFAM TIGR00115 tig: trigger factor 12 418 5.7E-138 T 23-10-2018 IPR005215 Trigger factor GO:0015031 CDG62_16850 82d26528fff6d3685448933e98ed3bde 443 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 418 6.7E-37 T 23-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CDG62_16850 82d26528fff6d3685448933e98ed3bde 443 Gene3D G3DSA:1.10.3120.10 115 423 5.3E-94 T 23-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 CDG62_16850 82d26528fff6d3685448933e98ed3bde 443 SUPERFAMILY SSF109998 246 435 1.03E-43 T 23-10-2018 IPR027304 Trigger factor/SurA domain superfamily CDG62_16120 12bdbeb55191afc99ad7cba459eb1ca4 182 Pfam PF14803 Nudix N-terminal 3 34 2.1E-13 T 23-10-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 CDG62_16120 12bdbeb55191afc99ad7cba459eb1ca4 182 SUPERFAMILY SSF55811 3 163 2.71E-36 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG62_16120 12bdbeb55191afc99ad7cba459eb1ca4 182 Gene3D G3DSA:2.20.70.10 1 35 4.3E-13 T 23-10-2018 CDG62_16120 12bdbeb55191afc99ad7cba459eb1ca4 182 Gene3D G3DSA:3.90.79.10 36 181 3.7E-39 T 23-10-2018 CDG62_16120 12bdbeb55191afc99ad7cba459eb1ca4 182 Pfam PF00293 NUDIX domain 46 144 2.7E-10 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG62_08320 d02db0e72da8ec06791311e426076ca9 503 Pfam PF11815 Domain of unknown function (DUF3336) 16 150 3.9E-36 T 23-10-2018 IPR021771 Triacylglycerol lipase GO:0004806|GO:0006629 CDG62_08320 d02db0e72da8ec06791311e426076ca9 503 Gene3D G3DSA:3.40.1090.20 156 242 5.4E-7 T 23-10-2018 CDG62_08320 d02db0e72da8ec06791311e426076ca9 503 SUPERFAMILY SSF52151 157 487 8.37E-44 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG62_08320 d02db0e72da8ec06791311e426076ca9 503 Pfam PF01734 Patatin-like phospholipase 159 340 1.4E-24 T 23-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDG62_08320 d02db0e72da8ec06791311e426076ca9 503 Gene3D G3DSA:3.40.1090.10 243 378 4.9E-13 T 23-10-2018 CDG62_13440 916ad20c8a021ad5042e532dca2f467f 344 Hamap MF_00219 Dihydroorotase [pyrC]. 2 344 44.945 T 23-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_13440 916ad20c8a021ad5042e532dca2f467f 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 7.8E-137 T 23-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_13440 916ad20c8a021ad5042e532dca2f467f 344 PIRSF PIRSF001237 1 344 2.5E-141 T 23-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_13440 916ad20c8a021ad5042e532dca2f467f 344 Gene3D G3DSA:3.20.20.140 2 343 1.1E-106 T 23-10-2018 CDG62_13440 916ad20c8a021ad5042e532dca2f467f 344 SUPERFAMILY SSF51556 2 342 7.17E-140 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG62_13440 916ad20c8a021ad5042e532dca2f467f 344 Pfam PF01979 Amidohydrolase family 11 310 1.9E-17 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CDG62_13440 916ad20c8a021ad5042e532dca2f467f 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 23-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_13440 916ad20c8a021ad5042e532dca2f467f 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 245 256 - T 23-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_13510 79f3bb0b181da1aac256c2f71b40dcf5 529 Pfam PF00005 ABC transporter 30 185 9.6E-28 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_13510 79f3bb0b181da1aac256c2f71b40dcf5 529 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_13510 79f3bb0b181da1aac256c2f71b40dcf5 529 ProSitePatterns PS00211 ABC transporters family signature. 423 437 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_13510 79f3bb0b181da1aac256c2f71b40dcf5 529 SUPERFAMILY SSF52540 24 256 9.92E-62 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_13510 79f3bb0b181da1aac256c2f71b40dcf5 529 Pfam PF00005 ABC transporter 303 451 4.6E-29 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_13510 79f3bb0b181da1aac256c2f71b40dcf5 529 SMART SM00382 38 235 2.6E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_13510 79f3bb0b181da1aac256c2f71b40dcf5 529 SMART SM00382 310 499 2.0E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_13510 79f3bb0b181da1aac256c2f71b40dcf5 529 SUPERFAMILY SSF52540 277 522 2.88E-63 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_13510 79f3bb0b181da1aac256c2f71b40dcf5 529 Gene3D G3DSA:3.40.50.300 273 529 2.0E-76 T 23-10-2018 CDG62_13510 79f3bb0b181da1aac256c2f71b40dcf5 529 Gene3D G3DSA:3.40.50.300 11 272 2.6E-77 T 23-10-2018 CDG62_10455 9af625fa419c282dee4a97c05b25e61c 388 Pfam PF08007 Cupin superfamily protein 14 313 6.5E-89 T 23-10-2018 IPR003347 JmjC domain CDG62_10455 9af625fa419c282dee4a97c05b25e61c 388 Gene3D G3DSA:2.60.120.650 1 213 5.2E-73 T 23-10-2018 CDG62_10455 9af625fa419c282dee4a97c05b25e61c 388 SUPERFAMILY SSF51197 6 295 5.77E-61 T 23-10-2018 CDG62_10455 9af625fa419c282dee4a97c05b25e61c 388 Gene3D G3DSA:1.10.10.2510 214 382 6.5E-14 T 23-10-2018 CDG62_10455 9af625fa419c282dee4a97c05b25e61c 388 SMART SM00558 90 228 3.5E-7 T 23-10-2018 IPR003347 JmjC domain CDG62_08740 09112da7158ca6e4d34b8a1c7e706501 278 Pfam PF03618 Kinase/pyrophosphorylase 11 268 3.5E-75 T 23-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CDG62_08740 09112da7158ca6e4d34b8a1c7e706501 278 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 8 277 74.806 T 23-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 SUPERFAMILY SSF47384 131 197 3.92E-13 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 194 1.8E-12 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 SMART SM00387 241 364 2.0E-25 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 Gene3D G3DSA:3.30.565.10 201 362 9.2E-39 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 Gene3D G3DSA:3.30.450.20 9 120 2.0E-14 T 23-10-2018 CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 Gene3D G3DSA:1.10.287.130 140 197 1.8E-13 T 23-10-2018 CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 361 1.1E-16 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 SUPERFAMILY SSF55785 9 100 2.09E-7 T 23-10-2018 IPR035965 PAS domain superfamily CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 SMART SM00091 7 74 0.001 T 23-10-2018 IPR000014 PAS domain CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 SMART SM00388 137 201 1.5E-11 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 343 8.1E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 361 8.1E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 310 8.1E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 Pfam PF00989 PAS fold 8 100 1.4E-8 T 23-10-2018 IPR013767 PAS fold GO:0006355 CDG62_08980 b6051fa7d88deb3ee783dd9aacfea809 369 SUPERFAMILY SSF55874 203 361 1.11E-34 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_02285 dc1bedff96df181e9248664f8acb9c75 70 SMART SM00530 11 66 2.0E-9 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_02285 dc1bedff96df181e9248664f8acb9c75 70 SUPERFAMILY SSF47413 2 67 6.48E-16 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG62_02285 dc1bedff96df181e9248664f8acb9c75 70 Pfam PF01381 Helix-turn-helix 12 65 2.0E-12 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_02285 dc1bedff96df181e9248664f8acb9c75 70 Gene3D G3DSA:1.10.260.40 1 69 9.1E-18 T 23-10-2018 CDG62_18250 2955877ba55c03ec50090b6b1ec0d6b7 467 ProSitePatterns PS01219 Ammonium transporters signature. 225 250 - T 23-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CDG62_18250 2955877ba55c03ec50090b6b1ec0d6b7 467 SUPERFAMILY SSF111352 70 448 8.63E-133 T 23-10-2018 CDG62_18250 2955877ba55c03ec50090b6b1ec0d6b7 467 PRINTS PR00342 Rhesus blood group protein signature 264 282 8.4E-7 T 23-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 CDG62_18250 2955877ba55c03ec50090b6b1ec0d6b7 467 PRINTS PR00342 Rhesus blood group protein signature 295 317 8.4E-7 T 23-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 CDG62_18250 2955877ba55c03ec50090b6b1ec0d6b7 467 PRINTS PR00342 Rhesus blood group protein signature 169 185 8.4E-7 T 23-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 CDG62_18250 2955877ba55c03ec50090b6b1ec0d6b7 467 PRINTS PR00342 Rhesus blood group protein signature 350 368 8.4E-7 T 23-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 CDG62_18250 2955877ba55c03ec50090b6b1ec0d6b7 467 TIGRFAM TIGR00836 amt: ammonium transporter 74 464 6.3E-139 T 23-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CDG62_18250 2955877ba55c03ec50090b6b1ec0d6b7 467 Pfam PF00909 Ammonium Transporter Family 76 464 1.4E-121 T 23-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CDG62_18250 2955877ba55c03ec50090b6b1ec0d6b7 467 Gene3D G3DSA:1.10.3430.10 53 467 4.5E-146 T 23-10-2018 IPR029020 Ammonium/urea transporter CDG62_17450 022e9bec7825ec767811f87a5f43442c 85 Pfam PF01206 Sulfurtransferase TusA 10 84 6.2E-22 T 23-10-2018 IPR001455 TusA-like domain CDG62_17450 022e9bec7825ec767811f87a5f43442c 85 SUPERFAMILY SSF64307 5 85 9.94E-21 T 23-10-2018 IPR036868 TusA-like domain superfamily CDG62_17450 022e9bec7825ec767811f87a5f43442c 85 Gene3D G3DSA:3.30.110.40 1 85 1.2E-25 T 23-10-2018 IPR036868 TusA-like domain superfamily CDG62_17450 022e9bec7825ec767811f87a5f43442c 85 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 23-10-2018 IPR001455 TusA-like domain CDG62_15545 5268dab980b775d281a533359e476774 200 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 6 194 5.5E-75 T 23-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG62_15545 5268dab980b775d281a533359e476774 200 Pfam PF00925 GTP cyclohydrolase II 8 170 2.1E-65 T 23-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG62_15545 5268dab980b775d281a533359e476774 200 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 197 43.237 T 23-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG62_15545 5268dab980b775d281a533359e476774 200 Gene3D G3DSA:3.40.50.10990 1 175 4.3E-71 T 23-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG62_15545 5268dab980b775d281a533359e476774 200 SUPERFAMILY SSF142695 3 172 2.48E-61 T 23-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG62_04145 5c3ca58897b3dd788d4919ea1940cde0 607 Gene3D G3DSA:3.40.710.10 324 506 8.0E-123 T 23-10-2018 CDG62_04145 5c3ca58897b3dd788d4919ea1940cde0 607 Pfam PF00905 Penicillin binding protein transpeptidase domain 288 586 9.4E-76 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDG62_04145 5c3ca58897b3dd788d4919ea1940cde0 607 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 23 601 41.391 T 23-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG62_04145 5c3ca58897b3dd788d4919ea1940cde0 607 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 244 1.5E-18 T 23-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CDG62_04145 5c3ca58897b3dd788d4919ea1940cde0 607 SUPERFAMILY SSF56519 67 261 9.94E-39 T 23-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 CDG62_04145 5c3ca58897b3dd788d4919ea1940cde0 607 SUPERFAMILY SSF56601 214 600 1.47E-89 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG62_04145 5c3ca58897b3dd788d4919ea1940cde0 607 Gene3D G3DSA:3.30.450.330 263 590 8.0E-123 T 23-10-2018 CDG62_04145 5c3ca58897b3dd788d4919ea1940cde0 607 Gene3D G3DSA:3.90.1310.10 152 262 3.5E-32 T 23-10-2018 CDG62_04145 5c3ca58897b3dd788d4919ea1940cde0 607 Gene3D G3DSA:3.90.1310.10 57 137 1.6E-10 T 23-10-2018 CDG62_01510 8cf36bce19cb31bdc2085999267465fc 1060 Gene3D G3DSA:3.40.50.300 735 943 4.2E-6 T 23-10-2018 CDG62_01510 8cf36bce19cb31bdc2085999267465fc 1060 SUPERFAMILY SSF52540 520 914 2.66E-6 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_06535 5e27b1da9733d77d66c1f917dc7a615a 253 Pfam PF00970 Oxidoreductase FAD-binding domain 19 93 2.3E-7 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG62_06535 5e27b1da9733d77d66c1f917dc7a615a 253 Gene3D G3DSA:3.40.50.80 99 253 3.2E-39 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_06535 5e27b1da9733d77d66c1f917dc7a615a 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 1.6E-6 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_06535 5e27b1da9733d77d66c1f917dc7a615a 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 53 60 1.6E-6 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_06535 5e27b1da9733d77d66c1f917dc7a615a 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 115 134 1.6E-6 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_06535 5e27b1da9733d77d66c1f917dc7a615a 253 SUPERFAMILY SSF52343 107 251 4.58E-32 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_06535 5e27b1da9733d77d66c1f917dc7a615a 253 SUPERFAMILY SSF63380 8 101 1.74E-22 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG62_06535 5e27b1da9733d77d66c1f917dc7a615a 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 140 149 4.7E-6 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_06535 5e27b1da9733d77d66c1f917dc7a615a 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 34 46 4.7E-6 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_06535 5e27b1da9733d77d66c1f917dc7a615a 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 4.7E-6 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_06535 5e27b1da9733d77d66c1f917dc7a615a 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 115 134 4.7E-6 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_06535 5e27b1da9733d77d66c1f917dc7a615a 253 Gene3D G3DSA:2.40.30.10 1 97 2.1E-27 T 23-10-2018 CDG62_06535 5e27b1da9733d77d66c1f917dc7a615a 253 Pfam PF00175 Oxidoreductase NAD-binding domain 116 229 3.0E-13 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG62_16950 fccf053e49a8b209f637c6ba152db3b3 170 PIRSF PIRSF000194 2 170 7.2E-53 T 23-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 CDG62_16950 fccf053e49a8b209f637c6ba152db3b3 170 Pfam PF00186 Dihydrofolate reductase 8 170 1.9E-53 T 23-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CDG62_16950 fccf053e49a8b209f637c6ba152db3b3 170 SUPERFAMILY SSF53597 6 170 3.93E-48 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDG62_16950 fccf053e49a8b209f637c6ba152db3b3 170 PRINTS PR00070 Dihydrofolate reductase signature 104 118 2.7E-15 T 23-10-2018 CDG62_16950 fccf053e49a8b209f637c6ba152db3b3 170 PRINTS PR00070 Dihydrofolate reductase signature 19 29 2.7E-15 T 23-10-2018 CDG62_16950 fccf053e49a8b209f637c6ba152db3b3 170 PRINTS PR00070 Dihydrofolate reductase signature 33 41 2.7E-15 T 23-10-2018 CDG62_16950 fccf053e49a8b209f637c6ba152db3b3 170 PRINTS PR00070 Dihydrofolate reductase signature 46 57 2.7E-15 T 23-10-2018 CDG62_16950 fccf053e49a8b209f637c6ba152db3b3 170 Gene3D G3DSA:3.40.430.10 6 170 2.0E-50 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDG62_16950 fccf053e49a8b209f637c6ba152db3b3 170 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 19 41 - T 23-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 CDG62_12575 654bb25f0762dbed146b52d25097daea 339 Gene3D G3DSA:3.40.50.720 2 175 4.7E-37 T 23-10-2018 CDG62_12575 654bb25f0762dbed146b52d25097daea 339 Gene3D G3DSA:1.10.1040.10 178 320 5.6E-24 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDG62_12575 654bb25f0762dbed146b52d25097daea 339 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 176 315 3.3E-20 T 23-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain CDG62_12575 654bb25f0762dbed146b52d25097daea 339 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 155 2.7E-33 T 23-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain CDG62_12575 654bb25f0762dbed146b52d25097daea 339 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 317 1.8E-60 T 23-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 CDG62_12575 654bb25f0762dbed146b52d25097daea 339 SUPERFAMILY SSF48179 176 316 2.48E-21 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_12575 654bb25f0762dbed146b52d25097daea 339 SUPERFAMILY SSF51735 1 120 9.01E-15 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_01830 e4fd2f9ff8bffc0563216b10c4bb79c0 279 Pfam PF00809 Pterin binding enzyme 5 248 2.6E-69 T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_01830 e4fd2f9ff8bffc0563216b10c4bb79c0 279 Gene3D G3DSA:3.20.20.20 1 270 2.0E-67 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_01830 e4fd2f9ff8bffc0563216b10c4bb79c0 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 4 19 - T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_01830 e4fd2f9ff8bffc0563216b10c4bb79c0 279 SUPERFAMILY SSF51717 3 265 1.7E-66 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_01830 e4fd2f9ff8bffc0563216b10c4bb79c0 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 38 51 - T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_01830 e4fd2f9ff8bffc0563216b10c4bb79c0 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 4 262 4.8E-82 T 23-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CDG62_17815 04b1d64ea5f6f5944a0d76556c099ff0 390 SUPERFAMILY SSF53901 266 389 1.52E-43 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_17815 04b1d64ea5f6f5944a0d76556c099ff0 390 Pfam PF02803 Thiolase, C-terminal domain 265 389 2.1E-47 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG62_17815 04b1d64ea5f6f5944a0d76556c099ff0 390 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 8 390 2.0E-190 T 23-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CDG62_17815 04b1d64ea5f6f5944a0d76556c099ff0 390 Gene3D G3DSA:3.40.47.10 9 271 1.0E-141 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_17815 04b1d64ea5f6f5944a0d76556c099ff0 390 Gene3D G3DSA:3.40.47.10 138 384 1.0E-141 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_17815 04b1d64ea5f6f5944a0d76556c099ff0 390 SUPERFAMILY SSF53901 5 262 9.37E-73 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_17815 04b1d64ea5f6f5944a0d76556c099ff0 390 ProSitePatterns PS00099 Thiolases active site. 371 384 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 CDG62_17815 04b1d64ea5f6f5944a0d76556c099ff0 390 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CDG62_17815 04b1d64ea5f6f5944a0d76556c099ff0 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 388 3.5E-130 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_17815 04b1d64ea5f6f5944a0d76556c099ff0 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDG62_17815 04b1d64ea5f6f5944a0d76556c099ff0 390 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 6 390 61.711 T 23-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CDG62_17815 04b1d64ea5f6f5944a0d76556c099ff0 390 Pfam PF00108 Thiolase, N-terminal domain 9 257 2.5E-73 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG62_17815 04b1d64ea5f6f5944a0d76556c099ff0 390 PIRSF PIRSF000429 3 390 9.8E-124 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_18320 984dc463d358b927a7cb9b94dd396cb4 155 Pfam PF02810 SEC-C motif 135 152 7.5E-8 T 23-10-2018 IPR004027 SEC-C motif CDG62_18320 984dc463d358b927a7cb9b94dd396cb4 155 SUPERFAMILY SSF103642 132 154 2.13E-7 T 23-10-2018 CDG62_18320 984dc463d358b927a7cb9b94dd396cb4 155 Gene3D G3DSA:3.10.450.50 1 155 2.5E-55 T 23-10-2018 CDG62_18320 984dc463d358b927a7cb9b94dd396cb4 155 SUPERFAMILY SSF54427 25 128 7.71E-33 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG62_03570 1dfb3d3f9cbd9d74e22f2ae316c0298d 900 SUPERFAMILY SSF52922 699 879 8.07E-49 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDG62_03570 1dfb3d3f9cbd9d74e22f2ae316c0298d 900 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 134 291 3.3E-8 T 23-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG62_03570 1dfb3d3f9cbd9d74e22f2ae316c0298d 900 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 880 0.0 T 23-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CDG62_03570 1dfb3d3f9cbd9d74e22f2ae316c0298d 900 PIRSF PIRSF000156 2 884 0.0 T 23-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CDG62_03570 1dfb3d3f9cbd9d74e22f2ae316c0298d 900 SUPERFAMILY SSF52518 54 464 7.49E-137 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG62_03570 1dfb3d3f9cbd9d74e22f2ae316c0298d 900 Gene3D G3DSA:3.40.50.970 53 467 4.0E-132 T 23-10-2018 CDG62_03570 1dfb3d3f9cbd9d74e22f2ae316c0298d 900 Gene3D G3DSA:3.40.50.970 468 701 1.9E-106 T 23-10-2018 CDG62_03570 1dfb3d3f9cbd9d74e22f2ae316c0298d 900 Gene3D G3DSA:3.40.50.920 702 883 2.8E-66 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDG62_03570 1dfb3d3f9cbd9d74e22f2ae316c0298d 900 SUPERFAMILY SSF52518 469 695 3.41E-95 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG62_07715 44a97d51b8718874bc5bf13a88dca1da 377 Pfam PF05816 Toxic anion resistance protein (TelA) 44 364 2.2E-84 T 23-10-2018 IPR008863 Toxic anion resistance CDG62_07715 44a97d51b8718874bc5bf13a88dca1da 377 PIRSF PIRSF026508 4 375 3.8E-113 T 23-10-2018 IPR008863 Toxic anion resistance CDG62_14045 50102563850708b99cd0dd2dc729ab2b 300 Gene3D G3DSA:1.10.10.10 1 68 2.1E-6 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_14045 50102563850708b99cd0dd2dc729ab2b 300 Pfam PF08279 HTH domain 14 55 4.0E-5 T 23-10-2018 IPR013196 Helix-turn-helix, type 11 CDG62_14045 50102563850708b99cd0dd2dc729ab2b 300 Pfam PF13280 WYL domain 129 294 3.1E-29 T 23-10-2018 IPR026881 WYL domain CDG62_00655 016cc35d46a1c70ae14476662320ccf3 307 Gene3D G3DSA:1.10.10.10 1 136 3.8E-42 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_00655 016cc35d46a1c70ae14476662320ccf3 307 SUPERFAMILY SSF46785 8 135 6.19E-31 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00655 016cc35d46a1c70ae14476662320ccf3 307 Pfam PF01051 Initiator Replication protein 3 225 1.2E-57 T 23-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CDG62_00655 016cc35d46a1c70ae14476662320ccf3 307 SUPERFAMILY SSF46785 127 229 1.2E-33 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00655 016cc35d46a1c70ae14476662320ccf3 307 Gene3D G3DSA:1.10.10.10 140 233 9.2E-30 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 SUPERFAMILY SSF54211 3 145 1.77E-45 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 Gene3D G3DSA:3.30.230.70 234 551 2.9E-112 T 23-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 PIRSF PIRSF005499 3 697 1.5E-284 T 23-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 SMART SM00316 622 692 1.3E-25 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 695 29.844 T 23-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 23-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 SUPERFAMILY SSF54211 297 490 9.62E-46 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 4.1E-14 T 23-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 Pfam PF03725 3' exoribonuclease family, domain 2 461 530 9.1E-7 T 23-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 SUPERFAMILY SSF54791 558 642 5.31E-22 T 23-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 Pfam PF01138 3' exoribonuclease family, domain 1 18 145 1.8E-18 T 23-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 Pfam PF01138 3' exoribonuclease family, domain 1 326 458 1.0E-19 T 23-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 Pfam PF00013 KH domain 559 615 7.9E-12 T 23-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 Gene3D G3DSA:3.30.1370.10 552 622 4.2E-19 T 23-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 322 6.0E-22 T 23-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 SUPERFAMILY SSF55666 452 550 8.84E-29 T 23-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 Gene3D G3DSA:3.30.230.70 1 229 8.9E-76 T 23-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 SUPERFAMILY SSF50249 621 694 6.45E-20 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 Gene3D G3DSA:2.40.50.140 623 696 8.6E-28 T 23-10-2018 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 SUPERFAMILY SSF46915 240 323 1.1E-17 T 23-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 SUPERFAMILY SSF55666 146 236 1.68E-29 T 23-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 Pfam PF00575 S1 RNA binding domain 621 692 9.4E-18 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG62_17525 606aff55898ba29bbb8d053ea577c93f 697 SMART SM00322 554 619 5.9E-13 T 23-10-2018 IPR004087 K Homology domain GO:0003676 CDG62_11385 15a38af84eaa975eb893c23d807cedd1 124 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 122 1.8E-50 T 23-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CDG62_11385 15a38af84eaa975eb893c23d807cedd1 124 Gene3D G3DSA:2.40.50.100 1 124 7.2E-49 T 23-10-2018 CDG62_11385 15a38af84eaa975eb893c23d807cedd1 124 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 23-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDG62_11385 15a38af84eaa975eb893c23d807cedd1 124 Pfam PF01597 Glycine cleavage H-protein 7 122 3.5E-45 T 23-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate CDG62_11385 15a38af84eaa975eb893c23d807cedd1 124 SUPERFAMILY SSF51230 3 122 5.18E-45 T 23-10-2018 IPR011053 Single hybrid motif CDG62_11385 15a38af84eaa975eb893c23d807cedd1 124 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 123 35.983 T 23-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CDG62_08175 2b7e2163b415d3f1e0281f641b7bcf59 203 Gene3D G3DSA:1.20.1050.10 83 189 4.8E-59 T 23-10-2018 CDG62_08175 2b7e2163b415d3f1e0281f641b7bcf59 203 SUPERFAMILY SSF47616 81 199 3.84E-21 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG62_08175 2b7e2163b415d3f1e0281f641b7bcf59 203 Gene3D G3DSA:3.40.30.10 3 195 4.8E-59 T 23-10-2018 CDG62_08175 2b7e2163b415d3f1e0281f641b7bcf59 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 75 1.4E-10 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG62_08175 2b7e2163b415d3f1e0281f641b7bcf59 203 SUPERFAMILY SSF52833 1 84 4.84E-18 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_08175 2b7e2163b415d3f1e0281f641b7bcf59 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 116 174 2.5E-6 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal CDG62_03695 9b4b3c9327686c3826217e06dfd5a787 242 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 10 182 1.2E-70 T 23-10-2018 IPR019912 FMN reductase, MsuE-like CDG62_03695 9b4b3c9327686c3826217e06dfd5a787 242 Gene3D G3DSA:3.40.50.360 4 182 8.9E-40 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_03695 9b4b3c9327686c3826217e06dfd5a787 242 SUPERFAMILY SSF52218 6 180 1.86E-28 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_03695 9b4b3c9327686c3826217e06dfd5a787 242 Pfam PF03358 NADPH-dependent FMN reductase 10 154 3.7E-30 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CDG62_19155 e485012cab1a4f15fe3c8bf27e273f40 112 Pfam PF04342 Putative member of DMT superfamily (DUF486) 5 109 6.9E-39 T 23-10-2018 IPR007437 Protein of unknown function DUF486 CDG62_19155 e485012cab1a4f15fe3c8bf27e273f40 112 PIRSF PIRSF021239 1 112 1.8E-45 T 23-10-2018 IPR007437 Protein of unknown function DUF486 CDG62_02895 2967d0c285b55325e95562a16235851f 360 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 360 76.594 T 23-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CDG62_02895 2967d0c285b55325e95562a16235851f 360 SUPERFAMILY SSF52540 1 336 1.14E-36 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_02895 2967d0c285b55325e95562a16235851f 360 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 1.3E-82 T 23-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CDG62_02895 2967d0c285b55325e95562a16235851f 360 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 337 5.1E-24 T 23-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CDG62_02895 2967d0c285b55325e95562a16235851f 360 Gene3D G3DSA:1.20.1050.90 116 294 9.0E-75 T 23-10-2018 CDG62_02895 2967d0c285b55325e95562a16235851f 360 Gene3D G3DSA:3.40.50.300 6 329 9.0E-75 T 23-10-2018 CDG62_01290 d02443b7da8cfd0b84a4cbdd48252a88 393 Gene3D G3DSA:2.40.420.20 307 373 1.3E-96 T 23-10-2018 CDG62_01290 d02443b7da8cfd0b84a4cbdd48252a88 393 Gene3D G3DSA:1.10.287.470 104 177 1.3E-96 T 23-10-2018 CDG62_01290 d02443b7da8cfd0b84a4cbdd48252a88 393 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 375 1.3E-86 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG62_01290 d02443b7da8cfd0b84a4cbdd48252a88 393 SUPERFAMILY SSF111369 58 303 1.57E-66 T 23-10-2018 CDG62_01290 d02443b7da8cfd0b84a4cbdd48252a88 393 Gene3D G3DSA:2.40.50.100 69 216 1.3E-96 T 23-10-2018 CDG62_01290 d02443b7da8cfd0b84a4cbdd48252a88 393 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 296 1.0E-18 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG62_01290 d02443b7da8cfd0b84a4cbdd48252a88 393 Gene3D G3DSA:2.40.30.170 58 306 1.3E-96 T 23-10-2018 CDG62_14835 fc161fbc87a54955dabfa993d971ef61 106 SMART SM00418 5 90 8.1E-27 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_14835 fc161fbc87a54955dabfa993d971ef61 106 Pfam PF01022 Bacterial regulatory protein, arsR family 12 58 5.6E-14 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_14835 fc161fbc87a54955dabfa993d971ef61 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 7.0E-24 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_14835 fc161fbc87a54955dabfa993d971ef61 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 7.0E-24 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_14835 fc161fbc87a54955dabfa993d971ef61 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 7.0E-24 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_14835 fc161fbc87a54955dabfa993d971ef61 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 7.0E-24 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_14835 fc161fbc87a54955dabfa993d971ef61 106 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 23-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 CDG62_14835 fc161fbc87a54955dabfa993d971ef61 106 SUPERFAMILY SSF46785 4 84 2.78E-25 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_14835 fc161fbc87a54955dabfa993d971ef61 106 Gene3D G3DSA:1.10.10.10 1 90 6.7E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_10515 3ccded03f4ee76392801560d4b0ad9aa 169 SUPERFAMILY SSF50891 6 167 4.38E-58 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_10515 3ccded03f4ee76392801560d4b0ad9aa 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 4.3E-11 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG62_10515 3ccded03f4ee76392801560d4b0ad9aa 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 4.3E-11 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG62_10515 3ccded03f4ee76392801560d4b0ad9aa 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 4.3E-11 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG62_10515 3ccded03f4ee76392801560d4b0ad9aa 169 PIRSF PIRSF001467 1 169 4.6E-26 T 23-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CDG62_10515 3ccded03f4ee76392801560d4b0ad9aa 169 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 165 3.5E-48 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG62_10515 3ccded03f4ee76392801560d4b0ad9aa 169 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 23-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CDG62_10515 3ccded03f4ee76392801560d4b0ad9aa 169 Gene3D G3DSA:2.40.100.10 3 167 2.1E-64 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_09040 2322c1b8e38d9561546570c2fbfa15d1 262 SUPERFAMILY SSF51161 2 262 1.64E-79 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG62_09040 2322c1b8e38d9561546570c2fbfa15d1 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 6 38 1.3E-8 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_09040 2322c1b8e38d9561546570c2fbfa15d1 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 142 9.4E-7 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_09040 2322c1b8e38d9561546570c2fbfa15d1 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 179 261 5.4E-25 T 23-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 CDG62_09040 2322c1b8e38d9561546570c2fbfa15d1 262 PIRSF PIRSF000456 4 262 2.5E-103 T 23-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CDG62_09040 2322c1b8e38d9561546570c2fbfa15d1 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 19 47 - T 23-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CDG62_09040 2322c1b8e38d9561546570c2fbfa15d1 262 Gene3D G3DSA:1.20.1180.10 196 262 1.0E-24 T 23-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 CDG62_09040 2322c1b8e38d9561546570c2fbfa15d1 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 4 262 43.003 T 23-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CDG62_09040 2322c1b8e38d9561546570c2fbfa15d1 262 Gene3D G3DSA:2.160.10.10 1 194 1.2E-60 T 23-10-2018 CDG62_09040 2322c1b8e38d9561546570c2fbfa15d1 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 152 180 - T 23-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CDG62_09040 2322c1b8e38d9561546570c2fbfa15d1 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 7 261 7.2E-97 T 23-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 CDG62_03650 60a3c98acbcfdc8c34b3fa5863813f91 323 SUPERFAMILY SSF82861 58 142 9.68E-8 T 23-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CDG62_03650 60a3c98acbcfdc8c34b3fa5863813f91 323 SUPERFAMILY SSF50182 143 206 1.99E-15 T 23-10-2018 IPR010920 LSM domain superfamily CDG62_03650 60a3c98acbcfdc8c34b3fa5863813f91 323 Gene3D G3DSA:3.30.70.100 210 304 9.6E-19 T 23-10-2018 CDG62_03650 60a3c98acbcfdc8c34b3fa5863813f91 323 Gene3D G3DSA:2.30.30.60 159 207 9.0E-15 T 23-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily CDG62_03650 60a3c98acbcfdc8c34b3fa5863813f91 323 Pfam PF00924 Mechanosensitive ion channel 104 300 7.1E-42 T 23-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CDG62_03650 60a3c98acbcfdc8c34b3fa5863813f91 323 SUPERFAMILY SSF82689 212 310 3.01E-22 T 23-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 897 961 1.4E-19 T 23-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 Gene3D G3DSA:3.40.50.620 9 208 1.5E-68 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_06555 fa3830b558e4332485f3d0089138c012 964 PRINTS PR00986 Valyl-tRNA synthetase signature 374 387 4.9E-33 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 PRINTS PR00986 Valyl-tRNA synthetase signature 474 495 4.9E-33 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 PRINTS PR00986 Valyl-tRNA synthetase signature 511 529 4.9E-33 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 PRINTS PR00986 Valyl-tRNA synthetase signature 40 51 4.9E-33 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 PRINTS PR00986 Valyl-tRNA synthetase signature 242 259 4.9E-33 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 Gene3D G3DSA:3.90.740.10 209 361 4.5E-35 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 20 642 2.3E-207 T 23-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 Gene3D G3DSA:1.10.287.380 890 962 2.6E-20 T 23-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 TIGRFAM TIGR00422 valS: valine--tRNA ligase 9 944 0.0 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 SUPERFAMILY SSF52374 8 652 3.13E-138 T 23-10-2018 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 SUPERFAMILY SSF46589 897 961 3.19E-15 T 23-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 SUPERFAMILY SSF50677 196 367 1.03E-52 T 23-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 SUPERFAMILY SSF47323 654 912 8.22E-67 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 58 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 Gene3D G3DSA:3.40.50.620 371 564 3.2E-44 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_06555 fa3830b558e4332485f3d0089138c012 964 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 962 15.758 T 23-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 Gene3D G3DSA:1.10.730.10 589 830 4.1E-71 T 23-10-2018 CDG62_06555 fa3830b558e4332485f3d0089138c012 964 Pfam PF08264 Anticodon-binding domain of tRNA 685 833 9.2E-40 T 23-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 Gene3D G3DSA:1.10.40.30 358 431 1.5E-192 T 23-10-2018 CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 Pfam PF00206 Lyase 4 298 1.1E-77 T 23-10-2018 IPR022761 Fumarate lyase, N-terminal CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 ProSitePatterns PS00163 Fumarate lyases signature. 273 282 - T 23-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 PRINTS PR00149 Fumarate lyase superfamily signature 229 256 3.2E-30 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 PRINTS PR00149 Fumarate lyase superfamily signature 273 289 3.2E-30 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 PRINTS PR00149 Fumarate lyase superfamily signature 100 118 3.2E-30 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 PRINTS PR00149 Fumarate lyase superfamily signature 145 163 3.2E-30 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 Pfam PF14698 Argininosuccinate lyase C-terminal 361 430 2.1E-25 T 23-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 Hamap MF_00006 Argininosuccinate lyase [argH]. 1 452 43.369 T 23-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 PRINTS PR00145 Argininosuccinate lyase family signature 140 160 2.1E-67 T 23-10-2018 CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 PRINTS PR00145 Argininosuccinate lyase family signature 308 327 2.1E-67 T 23-10-2018 CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 PRINTS PR00145 Argininosuccinate lyase family signature 229 253 2.1E-67 T 23-10-2018 CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 PRINTS PR00145 Argininosuccinate lyase family signature 191 207 2.1E-67 T 23-10-2018 CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 PRINTS PR00145 Argininosuccinate lyase family signature 273 289 2.1E-67 T 23-10-2018 CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 PRINTS PR00145 Argininosuccinate lyase family signature 99 121 2.1E-67 T 23-10-2018 CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 TIGRFAM TIGR00838 argH: argininosuccinate lyase 1 454 7.2E-194 T 23-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 SUPERFAMILY SSF48557 1 454 1.73E-153 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 Gene3D G3DSA:1.10.275.10 23 227 1.5E-192 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal CDG62_18070 7a7f6f9eb06d3f8de05a76019da303c1 460 Gene3D G3DSA:1.20.200.10 117 447 1.5E-192 T 23-10-2018 CDG62_06850 15384e738a63a2d70ea149536f186b5b 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 156 9.4E-51 T 23-10-2018 IPR000037 SsrA-binding protein GO:0003723 CDG62_06850 15384e738a63a2d70ea149536f186b5b 158 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 23-10-2018 IPR020081 SsrA-binding protein, conserved site CDG62_06850 15384e738a63a2d70ea149536f186b5b 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 69.819 T 23-10-2018 IPR000037 SsrA-binding protein GO:0003723 CDG62_06850 15384e738a63a2d70ea149536f186b5b 158 Pfam PF01668 SmpB protein 15 157 8.2E-56 T 23-10-2018 IPR000037 SsrA-binding protein GO:0003723 CDG62_06850 15384e738a63a2d70ea149536f186b5b 158 Gene3D G3DSA:2.40.280.10 7 136 5.1E-45 T 23-10-2018 IPR023620 Small protein B CDG62_06850 15384e738a63a2d70ea149536f186b5b 158 SUPERFAMILY SSF74982 9 139 9.42E-49 T 23-10-2018 IPR023620 Small protein B CDG62_06850 15384e738a63a2d70ea149536f186b5b 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 1.0E-53 T 23-10-2018 IPR000037 SsrA-binding protein GO:0003723 CDG62_11235 4a4e764b634435261e5454115f399aca 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 401 1.9E-222 T 23-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 CDG62_11235 4a4e764b634435261e5454115f399aca 401 SUPERFAMILY SSF53901 3 276 9.77E-82 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_11235 4a4e764b634435261e5454115f399aca 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CDG62_11235 4a4e764b634435261e5454115f399aca 401 SUPERFAMILY SSF53901 277 400 5.32E-43 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_11235 4a4e764b634435261e5454115f399aca 401 Pfam PF00108 Thiolase, N-terminal domain 5 268 8.5E-80 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG62_11235 4a4e764b634435261e5454115f399aca 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 CDG62_11235 4a4e764b634435261e5454115f399aca 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 2.7E-137 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_11235 4a4e764b634435261e5454115f399aca 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDG62_11235 4a4e764b634435261e5454115f399aca 401 PIRSF PIRSF000429 1 401 1.0E-130 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_11235 4a4e764b634435261e5454115f399aca 401 Gene3D G3DSA:3.40.47.10 6 282 1.8E-155 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_11235 4a4e764b634435261e5454115f399aca 401 Pfam PF02803 Thiolase, C-terminal domain 276 400 1.1E-44 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG62_11235 4a4e764b634435261e5454115f399aca 401 Gene3D G3DSA:3.40.47.10 141 398 1.8E-155 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_18910 c81456f3a7c6f069e0db8672cf45a54d 361 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 357 3.3E-124 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDG62_18910 c81456f3a7c6f069e0db8672cf45a54d 361 SUPERFAMILY SSF53383 15 358 9.14E-116 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_18910 c81456f3a7c6f069e0db8672cf45a54d 361 Gene3D G3DSA:3.40.640.10 1 243 4.2E-96 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_18910 c81456f3a7c6f069e0db8672cf45a54d 361 PIRSF PIRSF000390 1 361 7.9E-106 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDG62_18910 c81456f3a7c6f069e0db8672cf45a54d 361 Gene3D G3DSA:3.90.1150.10 245 360 2.4E-33 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_18745 b4d2a5cdf83ace87c9ae7bc4eb25063c 139 SUPERFAMILY SSF54637 7 135 6.93E-31 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_18745 b4d2a5cdf83ace87c9ae7bc4eb25063c 139 Gene3D G3DSA:3.10.129.10 4 132 2.1E-23 T 23-10-2018 CDG62_18745 b4d2a5cdf83ace87c9ae7bc4eb25063c 139 Pfam PF13279 Thioesterase-like superfamily 9 116 9.1E-10 T 23-10-2018 CDG62_18745 b4d2a5cdf83ace87c9ae7bc4eb25063c 139 PIRSF PIRSF003230 1 133 1.4E-19 T 23-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CDG62_06520 a5ceddbc47cf033cd003c006541b3eba 97 SMART SM00357 7 68 4.6E-10 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 CDG62_06520 a5ceddbc47cf033cd003c006541b3eba 97 Gene3D G3DSA:2.40.50.140 1 87 4.3E-18 T 23-10-2018 CDG62_06520 a5ceddbc47cf033cd003c006541b3eba 97 Pfam PF00313 'Cold-shock' DNA-binding domain 7 66 3.6E-13 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG62_06520 a5ceddbc47cf033cd003c006541b3eba 97 PIRSF PIRSF002599 1 92 4.5E-15 T 23-10-2018 IPR012156 Cold shock, CspA GO:0003676 CDG62_06520 a5ceddbc47cf033cd003c006541b3eba 97 SUPERFAMILY SSF50249 4 67 8.57E-14 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_14090 2c9842ec9021c229d88cc115f59cd0b0 304 SUPERFAMILY SSF52402 8 211 3.94E-74 T 23-10-2018 CDG62_14090 2c9842ec9021c229d88cc115f59cd0b0 304 Gene3D G3DSA:3.40.50.620 9 214 2.2E-64 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_14090 2c9842ec9021c229d88cc115f59cd0b0 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 259 9.5E-64 T 23-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 CDG62_14090 2c9842ec9021c229d88cc115f59cd0b0 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 11 304 6.5E-161 T 23-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDG62_14090 2c9842ec9021c229d88cc115f59cd0b0 304 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 6 304 57.876 T 23-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDG62_14090 2c9842ec9021c229d88cc115f59cd0b0 304 PIRSF PIRSF002936 1 304 4.0E-157 T 23-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDG62_04650 278b704eef75d762624844816690ec04 286 Gene3D G3DSA:3.40.50.300 39 236 6.1E-49 T 23-10-2018 CDG62_04650 278b704eef75d762624844816690ec04 286 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 50 234 26.839 T 23-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CDG62_04650 278b704eef75d762624844816690ec04 286 SUPERFAMILY SSF52540 54 236 2.25E-32 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_04650 278b704eef75d762624844816690ec04 286 Pfam PF01926 50S ribosome-binding GTPase 64 179 5.4E-18 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_04650 278b704eef75d762624844816690ec04 286 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 45 230 4.3E-73 T 23-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CDG62_15920 4761a8a3a9e295847ad605f187ba8150 152 Gene3D G3DSA:3.40.630.30 1 149 7.8E-40 T 23-10-2018 CDG62_15920 4761a8a3a9e295847ad605f187ba8150 152 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 9 139 3.4E-36 T 23-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 CDG62_15920 4761a8a3a9e295847ad605f187ba8150 152 SUPERFAMILY SSF55729 1 142 3.95E-32 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_15920 4761a8a3a9e295847ad605f187ba8150 152 Pfam PF00583 Acetyltransferase (GNAT) family 30 116 5.4E-14 T 23-10-2018 IPR000182 GNAT domain CDG62_08805 5a53124dfd5be91f56b2faaa091fd423 341 SMART SM00342 253 336 1.1E-22 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_08805 5a53124dfd5be91f56b2faaa091fd423 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 30 209 4.5E-31 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG62_08805 5a53124dfd5be91f56b2faaa091fd423 341 Gene3D G3DSA:1.10.10.60 235 341 2.2E-25 T 23-10-2018 CDG62_08805 5a53124dfd5be91f56b2faaa091fd423 341 SUPERFAMILY SSF109998 257 303 5.89E-5 T 23-10-2018 IPR027304 Trigger factor/SurA domain superfamily CDG62_08805 5a53124dfd5be91f56b2faaa091fd423 341 SUPERFAMILY SSF46689 289 338 7.17E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_08805 5a53124dfd5be91f56b2faaa091fd423 341 Pfam PF12833 Helix-turn-helix domain 260 337 1.0E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_18630 651e37196637f8520ab4a7c65562fdce 315 Gene3D G3DSA:2.60.120.10 18 263 1.7E-62 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG62_18630 651e37196637f8520ab4a7c65562fdce 315 PIRSF PIRSF006232 20 299 1.1E-74 T 23-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CDG62_18630 651e37196637f8520ab4a7c65562fdce 315 Pfam PF05726 Pirin C-terminal cupin domain 190 285 1.4E-18 T 23-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 CDG62_18630 651e37196637f8520ab4a7c65562fdce 315 Pfam PF02678 Pirin 40 138 1.0E-28 T 23-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CDG62_18630 651e37196637f8520ab4a7c65562fdce 315 SUPERFAMILY SSF51182 34 300 7.79E-70 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG62_09300 5b1b88da9bf0aecdfe72043507af85c5 217 SUPERFAMILY SSF116726 131 213 2.62E-10 T 23-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CDG62_09300 5b1b88da9bf0aecdfe72043507af85c5 217 Gene3D G3DSA:3.30.70.1450 138 213 3.7E-9 T 23-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 CDG62_09300 5b1b88da9bf0aecdfe72043507af85c5 217 Gene3D G3DSA:3.40.50.720 2 137 2.5E-37 T 23-10-2018 CDG62_09300 5b1b88da9bf0aecdfe72043507af85c5 217 Pfam PF02254 TrkA-N domain 4 119 1.5E-27 T 23-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CDG62_09300 5b1b88da9bf0aecdfe72043507af85c5 217 SUPERFAMILY SSF51735 3 133 7.09E-35 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_18065 07c907fd1c28d911d92e93b3821ec16e 369 Gene3D G3DSA:3.30.565.10 233 365 2.9E-7 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_18065 07c907fd1c28d911d92e93b3821ec16e 369 SUPERFAMILY SSF55874 233 363 1.2E-5 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_18065 07c907fd1c28d911d92e93b3821ec16e 369 Pfam PF06580 Histidine kinase 180 257 6.3E-25 T 23-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CDG62_14155 c5c3dd7684dcad0badebb37392ba5746 242 SMART SM00382 44 231 8.2E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_14155 c5c3dd7684dcad0badebb37392ba5746 242 Pfam PF00005 ABC transporter 36 184 4.6E-33 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_14155 c5c3dd7684dcad0badebb37392ba5746 242 Gene3D G3DSA:3.40.50.300 13 241 8.2E-65 T 23-10-2018 CDG62_14155 c5c3dd7684dcad0badebb37392ba5746 242 SUPERFAMILY SSF52540 15 238 7.23E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_14155 c5c3dd7684dcad0badebb37392ba5746 242 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_08725 89083517c3c8983ba133c04d4db3aae5 357 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 10 239 4.8E-95 T 23-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 CDG62_08725 89083517c3c8983ba133c04d4db3aae5 357 Pfam PF06481 COX Aromatic Rich Motif 297 323 5.0E-9 T 23-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 CDG62_08725 89083517c3c8983ba133c04d4db3aae5 357 SUPERFAMILY SSF81464 14 115 1.1E-22 T 23-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08725 89083517c3c8983ba133c04d4db3aae5 357 PIRSF PIRSF000292 1 351 2.7E-120 T 23-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 CDG62_08725 89083517c3c8983ba133c04d4db3aae5 357 Gene3D G3DSA:2.60.40.420 111 270 1.1E-42 T 23-10-2018 IPR008972 Cupredoxin CDG62_08725 89083517c3c8983ba133c04d4db3aae5 357 Gene3D G3DSA:1.10.287.90 26 110 2.2E-30 T 23-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08725 89083517c3c8983ba133c04d4db3aae5 357 SUPERFAMILY SSF49503 117 256 3.11E-37 T 23-10-2018 IPR008972 Cupredoxin CDG62_14145 744dafc170dd900f6d55fda4d4a4f2bd 271 Pfam PF01694 Rhomboid family 65 219 2.7E-34 T 23-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CDG62_14145 744dafc170dd900f6d55fda4d4a4f2bd 271 Gene3D G3DSA:1.20.1540.10 12 229 4.9E-35 T 23-10-2018 IPR035952 Rhomboid-like superfamily CDG62_14145 744dafc170dd900f6d55fda4d4a4f2bd 271 SUPERFAMILY SSF144091 17 222 2.75E-37 T 23-10-2018 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 Gene3D G3DSA:3.40.50.670 413 610 6.5E-72 T 23-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 SUPERFAMILY SSF54211 235 406 9.86E-60 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 Gene3D G3DSA:3.30.230.10 234 412 4.8E-72 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 SMART SM00387 46 190 7.4E-31 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 Gene3D G3DSA:3.40.50.670 720 822 1.2E-26 T 23-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR00418 DNA topoisomerase II family signature 519 536 1.8E-71 T 23-10-2018 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR00418 DNA topoisomerase II family signature 501 517 1.8E-71 T 23-10-2018 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR00418 DNA topoisomerase II family signature 50 65 1.8E-71 T 23-10-2018 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR00418 DNA topoisomerase II family signature 85 98 1.8E-71 T 23-10-2018 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR00418 DNA topoisomerase II family signature 756 772 1.8E-71 T 23-10-2018 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR00418 DNA topoisomerase II family signature 128 142 1.8E-71 T 23-10-2018 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR00418 DNA topoisomerase II family signature 434 448 1.8E-71 T 23-10-2018 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR00418 DNA topoisomerase II family signature 282 295 1.8E-71 T 23-10-2018 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR00418 DNA topoisomerase II family signature 539 551 1.8E-71 T 23-10-2018 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 ProSitePatterns PS00177 DNA topoisomerase II signature. 436 444 - T 23-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 SUPERFAMILY SSF56719 408 818 2.62E-86 T 23-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 20 819 2.0E-302 T 23-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 SMART SM00433 50 817 1.8E-267 T 23-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 17 823 100.42 T 23-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 Pfam PF01751 Toprim domain 433 545 7.8E-17 T 23-10-2018 IPR006171 TOPRIM domain CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 753 813 3.6E-30 T 23-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 Pfam PF00204 DNA gyrase B 235 404 2.5E-61 T 23-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 Gene3D G3DSA:3.10.20.690 611 703 1.2E-6 T 23-10-2018 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 47 189 1.3E-22 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 SUPERFAMILY SSF55874 20 232 1.83E-74 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR01159 DNA gyrase subunit B signature 326 342 2.3E-72 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR01159 DNA gyrase subunit B signature 374 388 2.3E-72 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR01159 DNA gyrase subunit B signature 234 256 2.3E-72 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR01159 DNA gyrase subunit B signature 484 493 2.3E-72 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR01159 DNA gyrase subunit B signature 210 223 2.3E-72 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR01159 DNA gyrase subunit B signature 777 789 2.3E-72 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR01159 DNA gyrase subunit B signature 20 30 2.3E-72 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR01159 DNA gyrase subunit B signature 195 210 2.3E-72 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR01159 DNA gyrase subunit B signature 388 408 2.3E-72 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 PRINTS PR01159 DNA gyrase subunit B signature 793 809 2.3E-72 T 23-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CDG62_02900 b6b34af1c4982a9197ab98d55fab5146 823 Gene3D G3DSA:3.30.565.10 16 233 1.8E-92 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_11165 30f6091d7c7538e78924bd187480a21a 295 SUPERFAMILY SSF103481 39 144 3.14E-5 T 23-10-2018 CDG62_11165 30f6091d7c7538e78924bd187480a21a 295 Pfam PF00892 EamA-like transporter family 156 293 6.4E-9 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_11165 30f6091d7c7538e78924bd187480a21a 295 Pfam PF00892 EamA-like transporter family 4 142 2.5E-6 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_11165 30f6091d7c7538e78924bd187480a21a 295 SUPERFAMILY SSF103481 203 294 2.35E-9 T 23-10-2018 CDG62_04740 eaf72ad0932a5cd4645361a2a62de90b 85 Pfam PF00366 Ribosomal protein S17 11 78 4.2E-32 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04740 eaf72ad0932a5cd4645361a2a62de90b 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 25.204 T 23-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04740 eaf72ad0932a5cd4645361a2a62de90b 85 Gene3D G3DSA:2.40.50.140 2 84 4.7E-36 T 23-10-2018 CDG62_04740 eaf72ad0932a5cd4645361a2a62de90b 85 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 2.4E-12 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04740 eaf72ad0932a5cd4645361a2a62de90b 85 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 2.4E-12 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04740 eaf72ad0932a5cd4645361a2a62de90b 85 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 2.4E-12 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04740 eaf72ad0932a5cd4645361a2a62de90b 85 SUPERFAMILY SSF50249 7 83 1.63E-32 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_04740 eaf72ad0932a5cd4645361a2a62de90b 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 77 4.0E-33 T 23-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04740 eaf72ad0932a5cd4645361a2a62de90b 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 77 1.1E-36 T 23-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04740 eaf72ad0932a5cd4645361a2a62de90b 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 23-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_15105 2fb2fc9074e64e157e8f6d8a61c3e1a2 438 Pfam PF04966 Carbohydrate-selective porin, OprB family 71 438 7.8E-93 T 23-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 CDG62_15105 2fb2fc9074e64e157e8f6d8a61c3e1a2 438 Gene3D G3DSA:2.40.160.180 26 438 1.5E-118 T 23-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily CDG62_06665 14ce393ceadfc72ab95b2ae85cb45059 244 SUPERFAMILY SSF51735 4 215 1.09E-41 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_06665 14ce393ceadfc72ab95b2ae85cb45059 244 Pfam PF00106 short chain dehydrogenase 11 188 8.0E-32 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06665 14ce393ceadfc72ab95b2ae85cb45059 244 Gene3D G3DSA:3.40.50.720 2 241 4.6E-43 T 23-10-2018 CDG62_06665 14ce393ceadfc72ab95b2ae85cb45059 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 3.3E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06665 14ce393ceadfc72ab95b2ae85cb45059 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.3E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06665 14ce393ceadfc72ab95b2ae85cb45059 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 3.3E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06665 14ce393ceadfc72ab95b2ae85cb45059 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 3.3E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06665 14ce393ceadfc72ab95b2ae85cb45059 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.3E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16630 3d2dcdfef9d59ff68d9d9a5e0888a548 351 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 36 193 1.1E-39 T 23-10-2018 IPR017482 Putative phage-type endonuclease CDG62_16630 3d2dcdfef9d59ff68d9d9a5e0888a548 351 Gene3D G3DSA:3.90.320.10 39 245 1.6E-37 T 23-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal CDG62_16630 3d2dcdfef9d59ff68d9d9a5e0888a548 351 Pfam PF09588 YqaJ-like viral recombinase domain 42 184 3.4E-35 T 23-10-2018 IPR019080 YqaJ viral recombinase CDG62_16630 3d2dcdfef9d59ff68d9d9a5e0888a548 351 SUPERFAMILY SSF52980 40 225 5.36E-32 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG62_10040 4ba50569fa1e70bd84a48b30d3ceda77 327 SUPERFAMILY SSF81324 26 246 4.71E-50 T 23-10-2018 CDG62_10040 4ba50569fa1e70bd84a48b30d3ceda77 327 PRINTS PR00169 Potassium channel signature 21 49 3.9E-31 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CDG62_10040 4ba50569fa1e70bd84a48b30d3ceda77 327 PRINTS PR00169 Potassium channel signature 190 212 3.9E-31 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CDG62_10040 4ba50569fa1e70bd84a48b30d3ceda77 327 PRINTS PR00169 Potassium channel signature 63 86 3.9E-31 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CDG62_10040 4ba50569fa1e70bd84a48b30d3ceda77 327 PRINTS PR00169 Potassium channel signature 159 182 3.9E-31 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CDG62_10040 4ba50569fa1e70bd84a48b30d3ceda77 327 PRINTS PR00169 Potassium channel signature 130 156 3.9E-31 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CDG62_10040 4ba50569fa1e70bd84a48b30d3ceda77 327 PRINTS PR00169 Potassium channel signature 219 245 3.9E-31 T 23-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CDG62_10040 4ba50569fa1e70bd84a48b30d3ceda77 327 Gene3D G3DSA:1.10.287.70 29 249 1.0E-58 T 23-10-2018 CDG62_10040 4ba50569fa1e70bd84a48b30d3ceda77 327 Pfam PF00520 Ion transport protein 29 247 1.0E-30 T 23-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 CDG62_11970 d8ab850c66221650a621e4a43d926aaa 139 Pfam PF01641 SelR domain 10 128 1.2E-55 T 23-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CDG62_11970 d8ab850c66221650a621e4a43d926aaa 139 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 136 2.6E-58 T 23-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CDG62_11970 d8ab850c66221650a621e4a43d926aaa 139 Gene3D G3DSA:2.170.150.20 2 139 1.6E-62 T 23-10-2018 CDG62_11970 d8ab850c66221650a621e4a43d926aaa 139 SUPERFAMILY SSF51316 5 137 2.67E-59 T 23-10-2018 IPR011057 Mss4-like superfamily CDG62_11970 d8ab850c66221650a621e4a43d926aaa 139 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 37.51 T 23-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CDG62_09285 7f3f6f2bbd17a99c3374449166f72f44 979 SUPERFAMILY SSF63411 793 976 8.0E-38 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG62_09285 7f3f6f2bbd17a99c3374449166f72f44 979 SMART SM01264 466 715 4.7E-71 T 23-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 CDG62_09285 7f3f6f2bbd17a99c3374449166f72f44 979 Gene3D G3DSA:3.30.830.10 530 787 5.3E-107 T 23-10-2018 CDG62_09285 7f3f6f2bbd17a99c3374449166f72f44 979 SUPERFAMILY SSF63411 522 770 5.36E-50 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG62_09285 7f3f6f2bbd17a99c3374449166f72f44 979 Gene3D G3DSA:3.30.830.10 3 255 5.0E-82 T 23-10-2018 CDG62_09285 7f3f6f2bbd17a99c3374449166f72f44 979 Pfam PF05193 Peptidase M16 inactive domain 208 391 3.3E-8 T 23-10-2018 IPR007863 Peptidase M16, C-terminal CDG62_09285 7f3f6f2bbd17a99c3374449166f72f44 979 SUPERFAMILY SSF63411 20 246 2.67E-42 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG62_09285 7f3f6f2bbd17a99c3374449166f72f44 979 Pfam PF00675 Insulinase (Peptidase family M16) 63 153 1.0E-7 T 23-10-2018 IPR011765 Peptidase M16, N-terminal CDG62_09285 7f3f6f2bbd17a99c3374449166f72f44 979 Gene3D G3DSA:3.30.830.10 499 949 5.3E-107 T 23-10-2018 CDG62_09285 7f3f6f2bbd17a99c3374449166f72f44 979 Gene3D G3DSA:3.30.830.10 260 488 7.9E-55 T 23-10-2018 CDG62_09285 7f3f6f2bbd17a99c3374449166f72f44 979 SUPERFAMILY SSF63411 262 523 1.89E-53 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG62_09285 7f3f6f2bbd17a99c3374449166f72f44 979 Pfam PF08367 Peptidase M16C associated 466 715 1.5E-53 T 23-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 CDG62_16000 6504f6ef939ad9655148cf9c2519c413 419 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 48.341 T 23-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 CDG62_16000 6504f6ef939ad9655148cf9c2519c413 419 Gene3D G3DSA:3.50.50.60 1 73 5.4E-12 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_16000 6504f6ef939ad9655148cf9c2519c413 419 SUPERFAMILY SSF51905 1 416 9.45E-54 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_16000 6504f6ef939ad9655148cf9c2519c413 419 Gene3D G3DSA:3.50.50.60 105 404 1.7E-55 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_16000 6504f6ef939ad9655148cf9c2519c413 419 SUPERFAMILY SSF54373 270 359 1.44E-16 T 23-10-2018 CDG62_16000 6504f6ef939ad9655148cf9c2519c413 419 Gene3D G3DSA:3.30.9.10 134 361 1.7E-55 T 23-10-2018 CDG62_16000 6504f6ef939ad9655148cf9c2519c413 419 Pfam PF01266 FAD dependent oxidoreductase 2 397 2.8E-74 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDG62_05090 ef86bedb5a9675b431b9fe7468336710 111 Gene3D G3DSA:3.90.190.10 1 110 5.5E-30 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like CDG62_05090 ef86bedb5a9675b431b9fe7468336710 111 Pfam PF04273 Putative phosphatase (DUF442) 2 106 2.0E-31 T 23-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 CDG62_05090 ef86bedb5a9675b431b9fe7468336710 111 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 3 105 1.4E-27 T 23-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 CDG62_05950 3dd29247037780550c58bdb800c6ce7a 150 SUPERFAMILY SSF54593 1 145 1.96E-30 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_05950 3dd29247037780550c58bdb800c6ce7a 150 Gene3D G3DSA:3.10.180.10 1 149 3.2E-43 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_05950 3dd29247037780550c58bdb800c6ce7a 150 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 142 1.0E-7 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDG62_11950 59200e107ed61f7569a21f3d9f70bf56 729 Gene3D G3DSA:2.40.170.20 200 729 7.4E-67 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_11950 59200e107ed61f7569a21f3d9f70bf56 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 86 729 1.9E-86 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDG62_11950 59200e107ed61f7569a21f3d9f70bf56 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 83 175 2.9E-12 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_11950 59200e107ed61f7569a21f3d9f70bf56 729 SUPERFAMILY SSF56935 35 729 4.66E-93 T 23-10-2018 CDG62_11950 59200e107ed61f7569a21f3d9f70bf56 729 Gene3D G3DSA:2.170.130.10 77 196 1.2E-18 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_11950 59200e107ed61f7569a21f3d9f70bf56 729 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 712 729 - T 23-10-2018 IPR010917 TonB-dependent receptor, conserved site CDG62_11950 59200e107ed61f7569a21f3d9f70bf56 729 Pfam PF00593 TonB dependent receptor 267 727 1.7E-33 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_16040 e498b72950dc7f6d34fa72bb6dbf1dde 105 Gene3D G3DSA:1.10.3730.20 1 105 6.4E-32 T 23-10-2018 CDG62_16040 e498b72950dc7f6d34fa72bb6dbf1dde 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.0E-28 T 23-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CDG62_16040 e498b72950dc7f6d34fa72bb6dbf1dde 105 SUPERFAMILY SSF103481 5 104 5.75E-21 T 23-10-2018 CDG62_11890 d4b20d982a6f06ce7d81c532fcc2fce9 356 SMART SM00930 274 349 0.0066 T 23-10-2018 IPR018449 NIL domain CDG62_11890 d4b20d982a6f06ce7d81c532fcc2fce9 356 SUPERFAMILY SSF52540 15 252 5.45E-83 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_11890 d4b20d982a6f06ce7d81c532fcc2fce9 356 Gene3D G3DSA:3.40.50.300 13 257 5.1E-76 T 23-10-2018 CDG62_11890 d4b20d982a6f06ce7d81c532fcc2fce9 356 SMART SM00382 43 230 1.5E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_11890 d4b20d982a6f06ce7d81c532fcc2fce9 356 Pfam PF09383 NIL domain 278 348 4.6E-8 T 23-10-2018 IPR018449 NIL domain CDG62_11890 d4b20d982a6f06ce7d81c532fcc2fce9 356 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_11890 d4b20d982a6f06ce7d81c532fcc2fce9 356 SUPERFAMILY SSF55021 271 352 1.26E-11 T 23-10-2018 CDG62_11890 d4b20d982a6f06ce7d81c532fcc2fce9 356 Gene3D G3DSA:3.30.70.260 258 356 4.9E-8 T 23-10-2018 CDG62_11890 d4b20d982a6f06ce7d81c532fcc2fce9 356 Pfam PF00005 ABC transporter 34 182 3.4E-36 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_07910 f3ca9347aebcdc2f8b33567d4f6b1086 475 Pfam PF03441 FAD binding domain of DNA photolyase 281 473 5.0E-83 T 23-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 CDG62_07910 f3ca9347aebcdc2f8b33567d4f6b1086 475 SUPERFAMILY SSF52425 1 174 9.94E-45 T 23-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 CDG62_07910 f3ca9347aebcdc2f8b33567d4f6b1086 475 Gene3D G3DSA:1.25.40.80 132 292 5.7E-73 T 23-10-2018 CDG62_07910 f3ca9347aebcdc2f8b33567d4f6b1086 475 PRINTS PR00147 DNA photolyase signature 331 347 1.9E-24 T 23-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CDG62_07910 f3ca9347aebcdc2f8b33567d4f6b1086 475 PRINTS PR00147 DNA photolyase signature 351 369 1.9E-24 T 23-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CDG62_07910 f3ca9347aebcdc2f8b33567d4f6b1086 475 PRINTS PR00147 DNA photolyase signature 141 157 1.9E-24 T 23-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CDG62_07910 f3ca9347aebcdc2f8b33567d4f6b1086 475 PRINTS PR00147 DNA photolyase signature 390 404 1.9E-24 T 23-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CDG62_07910 f3ca9347aebcdc2f8b33567d4f6b1086 475 Gene3D G3DSA:3.40.50.620 3 208 5.7E-73 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_07910 f3ca9347aebcdc2f8b33567d4f6b1086 475 Gene3D G3DSA:1.10.579.10 299 475 6.6E-79 T 23-10-2018 CDG62_07910 f3ca9347aebcdc2f8b33567d4f6b1086 475 SUPERFAMILY SSF48173 206 473 5.63E-105 T 23-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 CDG62_07910 f3ca9347aebcdc2f8b33567d4f6b1086 475 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 331 343 - T 23-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CDG62_07910 f3ca9347aebcdc2f8b33567d4f6b1086 475 Pfam PF00875 DNA photolyase 3 166 3.6E-39 T 23-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 CDG62_04045 73b1d5ed2f44a56992204b6cf3b02eb8 250 SUPERFAMILY SSF53335 2 138 7.97E-27 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_04045 73b1d5ed2f44a56992204b6cf3b02eb8 250 Gene3D G3DSA:1.10.10.2560 132 231 1.4E-79 T 23-10-2018 CDG62_04045 73b1d5ed2f44a56992204b6cf3b02eb8 250 Gene3D G3DSA:3.40.50.150 16 241 1.4E-79 T 23-10-2018 CDG62_04045 73b1d5ed2f44a56992204b6cf3b02eb8 250 Pfam PF08241 Methyltransferase domain 39 127 5.5E-16 T 23-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDG62_07875 466d048690dd62eb41dcd56ab5fd14cc 363 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 357 58.631 T 23-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CDG62_07875 466d048690dd62eb41dcd56ab5fd14cc 363 SUPERFAMILY SSF53383 15 357 1.41E-76 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_07875 466d048690dd62eb41dcd56ab5fd14cc 363 Gene3D G3DSA:3.90.1150.10 24 347 3.2E-111 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_07875 466d048690dd62eb41dcd56ab5fd14cc 363 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 355 5.0E-107 T 23-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CDG62_07875 466d048690dd62eb41dcd56ab5fd14cc 363 Gene3D G3DSA:3.40.640.10 46 268 3.2E-111 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_07875 466d048690dd62eb41dcd56ab5fd14cc 363 Pfam PF00155 Aminotransferase class I and II 32 351 2.6E-46 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG62_01605 02763a0515259a9cd602ef1c75251beb 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 1 117 7.4E-28 T 23-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_01605 02763a0515259a9cd602ef1c75251beb 124 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 23-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_01605 02763a0515259a9cd602ef1c75251beb 124 Gene3D G3DSA:1.20.1300.10 1 124 7.8E-40 T 23-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_01605 02763a0515259a9cd602ef1c75251beb 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 3 121 6.3E-38 T 23-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_01605 02763a0515259a9cd602ef1c75251beb 124 SUPERFAMILY SSF81343 1 124 2.62E-31 T 23-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_01605 02763a0515259a9cd602ef1c75251beb 124 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 80 93 - T 23-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_01605 02763a0515259a9cd602ef1c75251beb 124 PIRSF PIRSF000178 1 124 3.8E-29 T 23-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_13935 d280bfbba0d0b1d5d1f45943b6036e9c 188 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG62_13935 d280bfbba0d0b1d5d1f45943b6036e9c 188 PIRSF PIRSF004553 4 184 5.7E-47 T 23-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CDG62_13935 d280bfbba0d0b1d5d1f45943b6036e9c 188 SUPERFAMILY SSF53335 5 180 7.72E-44 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_13935 d280bfbba0d0b1d5d1f45943b6036e9c 188 Pfam PF03602 Conserved hypothetical protein 95 5 180 6.3E-52 T 23-10-2018 CDG62_13935 d280bfbba0d0b1d5d1f45943b6036e9c 188 Gene3D G3DSA:3.40.50.150 1 185 2.6E-52 T 23-10-2018 CDG62_13935 d280bfbba0d0b1d5d1f45943b6036e9c 188 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 182 3.5E-50 T 23-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CDG62_08620 9c571aee8f3e9cc2d4ea1af8b04abfab 293 Pfam PF01758 Sodium Bile acid symporter family 11 194 4.7E-33 T 23-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CDG62_08620 9c571aee8f3e9cc2d4ea1af8b04abfab 293 Gene3D G3DSA:1.20.1530.20 3 282 3.7E-76 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG62_05865 80c712570d346561220b08a4b70ea0b9 542 SUPERFAMILY SSF56024 33 253 1.0E-39 T 23-10-2018 CDG62_05865 80c712570d346561220b08a4b70ea0b9 542 SUPERFAMILY SSF56024 328 498 1.12E-27 T 23-10-2018 CDG62_05865 80c712570d346561220b08a4b70ea0b9 542 Pfam PF13091 PLD-like domain 92 241 4.6E-16 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDG62_05865 80c712570d346561220b08a4b70ea0b9 542 Pfam PF13091 PLD-like domain 333 485 1.3E-20 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDG62_05865 80c712570d346561220b08a4b70ea0b9 542 Gene3D G3DSA:3.30.870.10 82 262 6.1E-33 T 23-10-2018 CDG62_05865 80c712570d346561220b08a4b70ea0b9 542 SMART SM00155 432 459 5.2E-5 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CDG62_05865 80c712570d346561220b08a4b70ea0b9 542 SMART SM00155 182 209 0.0015 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CDG62_05865 80c712570d346561220b08a4b70ea0b9 542 Gene3D G3DSA:3.30.870.10 304 517 1.4E-37 T 23-10-2018 CDG62_16160 c5ef5f3f8bea355db293aa6bf39c6215 363 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 14 358 1.5E-93 T 23-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CDG62_16160 c5ef5f3f8bea355db293aa6bf39c6215 363 Gene3D G3DSA:3.40.640.10 45 269 2.0E-107 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_16160 c5ef5f3f8bea355db293aa6bf39c6215 363 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 362 56.594 T 23-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CDG62_16160 c5ef5f3f8bea355db293aa6bf39c6215 363 Pfam PF00155 Aminotransferase class I and II 32 357 2.8E-56 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG62_16160 c5ef5f3f8bea355db293aa6bf39c6215 363 Gene3D G3DSA:3.90.1150.10 27 351 2.0E-107 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_16160 c5ef5f3f8bea355db293aa6bf39c6215 363 SUPERFAMILY SSF53383 12 359 4.55E-74 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_07260 f8d5fe09a60bffe88db21a2240c8a6d4 119 Gene3D G3DSA:2.60.120.10 19 118 3.5E-21 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG62_07260 f8d5fe09a60bffe88db21a2240c8a6d4 119 SUPERFAMILY SSF51182 21 116 4.93E-12 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG62_07260 f8d5fe09a60bffe88db21a2240c8a6d4 119 Pfam PF05899 Protein of unknown function (DUF861) 46 114 3.6E-11 T 23-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 CDG62_09100 0c21378bb34a21b2108d3dc2c5e43731 871 SMART SM00458 715 845 2.4E-7 T 23-10-2018 IPR000772 Ricin B, lectin domain CDG62_09100 0c21378bb34a21b2108d3dc2c5e43731 871 Gene3D G3DSA:2.80.10.50 715 854 4.5E-13 T 23-10-2018 CDG62_09100 0c21378bb34a21b2108d3dc2c5e43731 871 Pfam PF00652 Ricin-type beta-trefoil lectin domain 727 842 1.8E-12 T 23-10-2018 IPR000772 Ricin B, lectin domain CDG62_09100 0c21378bb34a21b2108d3dc2c5e43731 871 SUPERFAMILY SSF50370 748 844 3.69E-16 T 23-10-2018 IPR035992 Ricin B-like lectins CDG62_09100 0c21378bb34a21b2108d3dc2c5e43731 871 Pfam PF10462 Peptidase M66 142 441 3.9E-47 T 23-10-2018 IPR019503 Peptidase M66 domain GO:0004222 CDG62_11660 cb62346d661929f8f94bc495cb0ac229 162 Pfam PF01638 HxlR-like helix-turn-helix 19 106 2.0E-24 T 23-10-2018 IPR002577 Helix-turn-helix, HxlR type CDG62_11660 cb62346d661929f8f94bc495cb0ac229 162 SUPERFAMILY SSF46785 7 143 1.65E-42 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_11660 cb62346d661929f8f94bc495cb0ac229 162 Gene3D G3DSA:1.10.10.10 3 161 4.9E-51 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_08960 459c8250b0b444ddd11c61b53d0a90f0 302 Gene3D G3DSA:3.40.190.10 166 267 7.0E-56 T 23-10-2018 CDG62_08960 459c8250b0b444ddd11c61b53d0a90f0 302 Gene3D G3DSA:3.40.190.10 92 294 7.0E-56 T 23-10-2018 CDG62_08960 459c8250b0b444ddd11c61b53d0a90f0 302 SUPERFAMILY SSF53850 90 298 1.0E-40 T 23-10-2018 CDG62_08960 459c8250b0b444ddd11c61b53d0a90f0 302 Pfam PF03466 LysR substrate binding domain 90 296 1.0E-39 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_08960 459c8250b0b444ddd11c61b53d0a90f0 302 Gene3D G3DSA:1.10.10.10 3 90 4.3E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_08960 459c8250b0b444ddd11c61b53d0a90f0 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.2E-12 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_08960 459c8250b0b444ddd11c61b53d0a90f0 302 SUPERFAMILY SSF46785 4 86 2.39E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_04415 28b0919a7013a66979eb524c494a4824 409 Pfam PF07690 Major Facilitator Superfamily 24 356 4.5E-37 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_04415 28b0919a7013a66979eb524c494a4824 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_04415 28b0919a7013a66979eb524c494a4824 409 Gene3D G3DSA:1.20.1720.10 17 391 8.6E-67 T 23-10-2018 CDG62_04415 28b0919a7013a66979eb524c494a4824 409 SUPERFAMILY SSF103473 11 391 2.62E-52 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_11415 d4be8feb934624ff4e3b7b8ff7fb3885 342 Pfam PF00970 Oxidoreductase FAD-binding domain 35 127 6.5E-9 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG62_11415 d4be8feb934624ff4e3b7b8ff7fb3885 342 Pfam PF00175 Oxidoreductase NAD-binding domain 138 232 4.6E-7 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG62_11415 d4be8feb934624ff4e3b7b8ff7fb3885 342 Gene3D G3DSA:3.10.20.30 257 342 9.7E-12 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG62_11415 d4be8feb934624ff4e3b7b8ff7fb3885 342 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 268 312 1.1E-4 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDG62_11415 d4be8feb934624ff4e3b7b8ff7fb3885 342 SUPERFAMILY SSF54292 244 341 1.28E-16 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG62_11415 d4be8feb934624ff4e3b7b8ff7fb3885 342 Gene3D G3DSA:3.40.50.80 128 256 5.5E-20 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_11415 d4be8feb934624ff4e3b7b8ff7fb3885 342 SUPERFAMILY SSF63380 24 130 1.3E-17 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG62_11415 d4be8feb934624ff4e3b7b8ff7fb3885 342 SUPERFAMILY SSF52343 118 240 5.37E-18 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_11415 d4be8feb934624ff4e3b7b8ff7fb3885 342 Gene3D G3DSA:2.40.30.10 28 127 1.8E-13 T 23-10-2018 CDG62_08505 118f6aba41d32ad3a30bcd92fa1861ca 198 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 1.4E-28 T 23-10-2018 IPR001498 Impact, N-terminal CDG62_08505 118f6aba41d32ad3a30bcd92fa1861ca 198 SUPERFAMILY SSF54211 4 122 4.93E-39 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_08505 118f6aba41d32ad3a30bcd92fa1861ca 198 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 71 100 - T 23-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CDG62_08505 118f6aba41d32ad3a30bcd92fa1861ca 198 SUPERFAMILY SSF54980 130 194 2.52E-8 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG62_08505 118f6aba41d32ad3a30bcd92fa1861ca 198 Gene3D G3DSA:3.30.230.30 1 125 2.7E-44 T 23-10-2018 IPR036956 Impact, N-terminal domain superfamily CDG62_12645 2f6c0bae16fda22bc63c08a304e7ebbb 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 226 263 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_12645 2f6c0bae16fda22bc63c08a304e7ebbb 403 SUPERFAMILY SSF53383 14 399 3.66E-113 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_12645 2f6c0bae16fda22bc63c08a304e7ebbb 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 16 401 67.672 T 23-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CDG62_12645 2f6c0bae16fda22bc63c08a304e7ebbb 403 Pfam PF00202 Aminotransferase class-III 26 398 1.4E-102 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_12645 2f6c0bae16fda22bc63c08a304e7ebbb 403 PIRSF PIRSF000521 123 162 0.015 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_12645 2f6c0bae16fda22bc63c08a304e7ebbb 403 PIRSF PIRSF000521 23 127 1.5E-9 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_12645 2f6c0bae16fda22bc63c08a304e7ebbb 403 PIRSF PIRSF000521 174 401 2.4E-34 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_12645 2f6c0bae16fda22bc63c08a304e7ebbb 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 398 2.3E-128 T 23-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CDG62_12645 2f6c0bae16fda22bc63c08a304e7ebbb 403 Gene3D G3DSA:3.40.640.10 60 310 1.8E-124 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_12645 2f6c0bae16fda22bc63c08a304e7ebbb 403 Gene3D G3DSA:3.90.1150.10 15 389 1.8E-124 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_03415 4747e952d1a038f3e185df6b57562052 236 SUPERFAMILY SSF56024 13 135 4.71E-10 T 23-10-2018 CDG62_03415 4747e952d1a038f3e185df6b57562052 236 Gene3D G3DSA:3.30.870.10 4 145 6.6E-10 T 23-10-2018 CDG62_03415 4747e952d1a038f3e185df6b57562052 236 Pfam PF13091 PLD-like domain 15 130 1.4E-8 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDG62_09925 74bdd55801407a305036d800a62b0801 181 Gene3D G3DSA:3.30.420.10 2 158 2.2E-50 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_09925 74bdd55801407a305036d800a62b0801 181 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 7.5E-58 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG62_09925 74bdd55801407a305036d800a62b0801 181 SUPERFAMILY SSF53098 3 156 7.59E-52 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_09925 74bdd55801407a305036d800a62b0801 181 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 23-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CDG62_09925 74bdd55801407a305036d800a62b0801 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.0E-35 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG62_09925 74bdd55801407a305036d800a62b0801 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.0E-35 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG62_09925 74bdd55801407a305036d800a62b0801 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.0E-35 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG62_09925 74bdd55801407a305036d800a62b0801 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.0E-35 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG62_09925 74bdd55801407a305036d800a62b0801 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.0E-35 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG62_09925 74bdd55801407a305036d800a62b0801 181 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 154 4.0E-61 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG62_09925 74bdd55801407a305036d800a62b0801 181 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 45.735 T 23-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CDG62_10230 0e486c0497c40146758b31b4e08a169e 101 Gene3D G3DSA:4.10.520.10 6 99 5.8E-31 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDG62_10230 0e486c0497c40146758b31b4e08a169e 101 SMART SM00411 6 96 4.4E-36 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_10230 0e486c0497c40146758b31b4e08a169e 101 Pfam PF00216 Bacterial DNA-binding protein 6 96 6.5E-27 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_10230 0e486c0497c40146758b31b4e08a169e 101 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 7 98 7.5E-38 T 23-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CDG62_10230 0e486c0497c40146758b31b4e08a169e 101 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 52 71 - T 23-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CDG62_10230 0e486c0497c40146758b31b4e08a169e 101 SUPERFAMILY SSF47729 6 97 2.36E-27 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDG62_10230 0e486c0497c40146758b31b4e08a169e 101 PRINTS PR01727 Prokaryotic integration host factor signature 64 77 1.3E-18 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_10230 0e486c0497c40146758b31b4e08a169e 101 PRINTS PR01727 Prokaryotic integration host factor signature 46 61 1.3E-18 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_10230 0e486c0497c40146758b31b4e08a169e 101 PRINTS PR01727 Prokaryotic integration host factor signature 80 94 1.3E-18 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_17090 81bf28938b47b3288b52ef2e776777af 312 PIRSF PIRSF026649 8 311 1.5E-85 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDG62_17090 81bf28938b47b3288b52ef2e776777af 312 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 9 311 42.181 T 23-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 CDG62_17090 81bf28938b47b3288b52ef2e776777af 312 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 11 302 3.4E-69 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDG62_11295 5bbfc30e8732e2ff2f8c017b8f78415f 203 SUPERFAMILY SSF46689 2 75 1.28E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_11295 5bbfc30e8732e2ff2f8c017b8f78415f 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.5E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_11295 5bbfc30e8732e2ff2f8c017b8f78415f 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 2.5E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_11295 5bbfc30e8732e2ff2f8c017b8f78415f 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 61 1.9E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_11295 5bbfc30e8732e2ff2f8c017b8f78415f 203 Gene3D G3DSA:1.10.357.10 11 175 1.7E-13 T 23-10-2018 CDG62_11420 3bd9201bf836f89c787580e16eee70c9 371 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 1.1E-25 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDG62_11420 3bd9201bf836f89c787580e16eee70c9 371 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 23-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CDG62_11420 3bd9201bf836f89c787580e16eee70c9 371 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 1.4E-219 T 23-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CDG62_11420 3bd9201bf836f89c787580e16eee70c9 371 SUPERFAMILY SSF51735 161 333 3.84E-46 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_11420 3bd9201bf836f89c787580e16eee70c9 371 Pfam PF00107 Zinc-binding dehydrogenase 197 329 3.5E-25 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDG62_11420 3bd9201bf836f89c787580e16eee70c9 371 SUPERFAMILY SSF50129 1 184 1.83E-70 T 23-10-2018 IPR011032 GroES-like superfamily CDG62_11420 3bd9201bf836f89c787580e16eee70c9 371 SUPERFAMILY SSF50129 318 369 1.22E-10 T 23-10-2018 IPR011032 GroES-like superfamily CDG62_11420 3bd9201bf836f89c787580e16eee70c9 371 SMART SM00829 12 367 4.1E-4 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDG62_11420 3bd9201bf836f89c787580e16eee70c9 371 Gene3D G3DSA:3.40.50.720 174 312 1.6E-148 T 23-10-2018 CDG62_11420 3bd9201bf836f89c787580e16eee70c9 371 Gene3D G3DSA:3.90.180.10 6 364 1.6E-148 T 23-10-2018 CDG62_14915 1fd725e7cec629b3602a70f447a2ced0 348 Gene3D G3DSA:3.90.640.10 189 264 1.5E-127 T 23-10-2018 CDG62_14915 1fd725e7cec629b3602a70f447a2ced0 348 SUPERFAMILY SSF53067 10 151 2.67E-36 T 23-10-2018 CDG62_14915 1fd725e7cec629b3602a70f447a2ced0 348 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 339 7.1E-148 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDG62_14915 1fd725e7cec629b3602a70f447a2ced0 348 Pfam PF06723 MreB/Mbl protein 13 339 7.9E-141 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDG62_14915 1fd725e7cec629b3602a70f447a2ced0 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 71 94 3.2E-60 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDG62_14915 1fd725e7cec629b3602a70f447a2ced0 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 3.2E-60 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDG62_14915 1fd725e7cec629b3602a70f447a2ced0 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 3.2E-60 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDG62_14915 1fd725e7cec629b3602a70f447a2ced0 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 3.2E-60 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDG62_14915 1fd725e7cec629b3602a70f447a2ced0 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 51 69 3.2E-60 T 23-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CDG62_14915 1fd725e7cec629b3602a70f447a2ced0 348 Gene3D G3DSA:3.30.420.40 157 322 1.5E-127 T 23-10-2018 CDG62_14915 1fd725e7cec629b3602a70f447a2ced0 348 Gene3D G3DSA:3.30.420.40 14 332 1.5E-127 T 23-10-2018 CDG62_14915 1fd725e7cec629b3602a70f447a2ced0 348 SUPERFAMILY SSF53067 153 339 2.73E-49 T 23-10-2018 CDG62_08815 dc1dccbfcb41b71b2f8f5bd27aef3f98 378 PIRSF PIRSF016578 128 375 2.9E-16 T 23-10-2018 CDG62_08815 dc1dccbfcb41b71b2f8f5bd27aef3f98 378 PIRSF PIRSF016578 3 104 4.5E-4 T 23-10-2018 CDG62_08815 dc1dccbfcb41b71b2f8f5bd27aef3f98 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG62_08815 dc1dccbfcb41b71b2f8f5bd27aef3f98 378 Gene3D G3DSA:1.10.540.10 1 118 9.4E-40 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG62_08815 dc1dccbfcb41b71b2f8f5bd27aef3f98 378 Gene3D G3DSA:1.20.140.10 232 378 5.6E-57 T 23-10-2018 CDG62_08815 dc1dccbfcb41b71b2f8f5bd27aef3f98 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 1.2E-50 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG62_08815 dc1dccbfcb41b71b2f8f5bd27aef3f98 378 SUPERFAMILY SSF56645 2 239 1.83E-79 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_08815 dc1dccbfcb41b71b2f8f5bd27aef3f98 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 1.0E-31 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG62_08815 dc1dccbfcb41b71b2f8f5bd27aef3f98 378 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG62_08815 dc1dccbfcb41b71b2f8f5bd27aef3f98 378 Gene3D G3DSA:2.40.110.10 119 231 1.0E-44 T 23-10-2018 CDG62_08815 dc1dccbfcb41b71b2f8f5bd27aef3f98 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 4.8E-27 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG62_08815 dc1dccbfcb41b71b2f8f5bd27aef3f98 378 SUPERFAMILY SSF47203 226 377 1.93E-58 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_04670 9400fcfaf1c8998e77c6bde68a3c8d7c 276 Pfam PF00106 short chain dehydrogenase 7 188 9.0E-49 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04670 9400fcfaf1c8998e77c6bde68a3c8d7c 276 SUPERFAMILY SSF51735 6 252 5.93E-60 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_04670 9400fcfaf1c8998e77c6bde68a3c8d7c 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 8.2E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04670 9400fcfaf1c8998e77c6bde68a3c8d7c 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 8.2E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04670 9400fcfaf1c8998e77c6bde68a3c8d7c 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.2E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04670 9400fcfaf1c8998e77c6bde68a3c8d7c 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 8.2E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04670 9400fcfaf1c8998e77c6bde68a3c8d7c 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 8.2E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04670 9400fcfaf1c8998e77c6bde68a3c8d7c 276 Gene3D G3DSA:3.40.50.720 6 273 8.9E-66 T 23-10-2018 CDG62_04670 9400fcfaf1c8998e77c6bde68a3c8d7c 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.0E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04670 9400fcfaf1c8998e77c6bde68a3c8d7c 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 1.0E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_04670 9400fcfaf1c8998e77c6bde68a3c8d7c 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.0E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_15420 3bd06857d2441397893d4d2d64c167a9 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 2.8E-19 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_15420 3bd06857d2441397893d4d2d64c167a9 237 SMART SM00895 100 230 3.5E-19 T 23-10-2018 IPR011711 GntR, C-terminal CDG62_15420 3bd06857d2441397893d4d2d64c167a9 237 Gene3D G3DSA:1.10.10.10 5 87 3.8E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15420 3bd06857d2441397893d4d2d64c167a9 237 Gene3D G3DSA:1.20.120.530 95 237 4.5E-26 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG62_15420 3bd06857d2441397893d4d2d64c167a9 237 SUPERFAMILY SSF48008 96 233 2.35E-23 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG62_15420 3bd06857d2441397893d4d2d64c167a9 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.2E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_15420 3bd06857d2441397893d4d2d64c167a9 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.2E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_15420 3bd06857d2441397893d4d2d64c167a9 237 SUPERFAMILY SSF46785 8 80 1.19E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_15420 3bd06857d2441397893d4d2d64c167a9 237 SMART SM00345 17 76 3.1E-20 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_15420 3bd06857d2441397893d4d2d64c167a9 237 Pfam PF07729 FCD domain 101 229 6.6E-22 T 23-10-2018 IPR011711 GntR, C-terminal CDG62_15010 1eab558ca19fa567c3e4147a36580aa4 1070 SMART SM00965 63 113 0.0039 T 23-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CDG62_15010 1eab558ca19fa567c3e4147a36580aa4 1070 Pfam PF00593 TonB dependent receptor 628 1069 1.3E-30 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_15010 1eab558ca19fa567c3e4147a36580aa4 1070 Gene3D G3DSA:3.55.50.30 33 136 9.9E-16 T 23-10-2018 CDG62_15010 1eab558ca19fa567c3e4147a36580aa4 1070 Gene3D G3DSA:2.170.130.10 168 296 3.0E-37 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_15010 1eab558ca19fa567c3e4147a36580aa4 1070 Pfam PF07715 TonB-dependent Receptor Plug Domain 181 268 4.3E-12 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_15010 1eab558ca19fa567c3e4147a36580aa4 1070 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 1053 1070 - T 23-10-2018 IPR010917 TonB-dependent receptor, conserved site CDG62_15010 1eab558ca19fa567c3e4147a36580aa4 1070 SUPERFAMILY SSF56935 176 1070 4.03E-63 T 23-10-2018 CDG62_13560 5ca48792bc24e4ba2b6ebe8b58f46b7d 135 Hamap MF_00048 UPF0102 protein YraN [yraN]. 1 111 18.648 T 23-10-2018 IPR003509 Uncharacterised protein family UPF0102 CDG62_13560 5ca48792bc24e4ba2b6ebe8b58f46b7d 135 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 3 114 2.7E-28 T 23-10-2018 IPR003509 Uncharacterised protein family UPF0102 CDG62_13560 5ca48792bc24e4ba2b6ebe8b58f46b7d 135 Pfam PF02021 Uncharacterised protein family UPF0102 7 97 1.1E-25 T 23-10-2018 IPR003509 Uncharacterised protein family UPF0102 CDG62_13560 5ca48792bc24e4ba2b6ebe8b58f46b7d 135 SUPERFAMILY SSF52980 2 98 3.58E-21 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG62_13560 5ca48792bc24e4ba2b6ebe8b58f46b7d 135 Gene3D G3DSA:3.40.1350.10 6 129 3.4E-32 T 23-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 9.7E-30 T 23-10-2018 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 9.7E-30 T 23-10-2018 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 204 9.7E-30 T 23-10-2018 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 9.7E-30 T 23-10-2018 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 9.7E-30 T 23-10-2018 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PIRSF PIRSF000350 3 468 1.2E-68 T 23-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 Gene3D G3DSA:3.50.50.60 15 337 3.7E-90 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 Gene3D G3DSA:3.50.50.60 159 277 3.7E-90 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 SUPERFAMILY SSF51905 14 327 3.24E-53 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 Gene3D G3DSA:3.30.390.30 352 470 8.0E-32 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 461 8.1E-28 T 23-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 1.5E-51 T 23-10-2018 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 1.5E-51 T 23-10-2018 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 186 211 1.5E-51 T 23-10-2018 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 1.5E-51 T 23-10-2018 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 16 38 1.5E-51 T 23-10-2018 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 159 1.5E-51 T 23-10-2018 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 49 64 1.5E-51 T 23-10-2018 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 1.5E-51 T 23-10-2018 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 1.5E-51 T 23-10-2018 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 SUPERFAMILY SSF55424 353 468 3.09E-30 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG62_13195 73e528c90404dfa8a8401cb7958a67f0 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 334 1.1E-59 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_03470 be34c21dc68f565b95137893c5db13cb 303 Pfam PF07859 alpha/beta hydrolase fold 75 277 4.1E-58 T 23-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CDG62_03470 be34c21dc68f565b95137893c5db13cb 303 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 143 155 - T 23-10-2018 IPR033140 Lipase, GDXG, putative serine active site CDG62_03470 be34c21dc68f565b95137893c5db13cb 303 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 75 91 - T 23-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 CDG62_03470 be34c21dc68f565b95137893c5db13cb 303 Gene3D G3DSA:3.40.50.1820 37 300 5.0E-80 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_03470 be34c21dc68f565b95137893c5db13cb 303 SUPERFAMILY SSF53474 59 296 3.19E-58 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_13580 d1fd637e11bc9a2aeec3123df926b654 256 SUPERFAMILY SSF64167 2 252 3.53E-76 T 23-10-2018 CDG62_13580 d1fd637e11bc9a2aeec3123df926b654 256 Gene3D G3DSA:3.40.1210.10 1 255 1.9E-82 T 23-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CDG62_13580 d1fd637e11bc9a2aeec3123df926b654 256 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 256 35.384 T 23-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CDG62_13580 d1fd637e11bc9a2aeec3123df926b654 256 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 2 242 1.3E-66 T 23-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CDG62_13580 d1fd637e11bc9a2aeec3123df926b654 256 Pfam PF01975 Survival protein SurE 3 186 1.1E-55 T 23-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CDG62_11965 c300a9a03af6644c5c7be44f936e4d06 160 PIRSF PIRSF000303 1 160 6.2E-67 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_11965 c300a9a03af6644c5c7be44f936e4d06 160 Gene3D G3DSA:3.40.30.10 1 160 1.1E-68 T 23-10-2018 CDG62_11965 c300a9a03af6644c5c7be44f936e4d06 160 SUPERFAMILY SSF52833 3 158 8.2E-60 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_11965 c300a9a03af6644c5c7be44f936e4d06 160 PRINTS PR01011 Glutathione peroxidase family signature 22 39 2.3E-19 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_11965 c300a9a03af6644c5c7be44f936e4d06 160 PRINTS PR01011 Glutathione peroxidase family signature 57 73 2.3E-19 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_11965 c300a9a03af6644c5c7be44f936e4d06 160 PRINTS PR01011 Glutathione peroxidase family signature 122 131 2.3E-19 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_11965 c300a9a03af6644c5c7be44f936e4d06 160 Pfam PF00255 Glutathione peroxidase 4 110 3.2E-38 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_06955 553c3675065847e083d62167cdfe1d03 296 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 154 183 - T 23-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CDG62_06955 553c3675065847e083d62167cdfe1d03 296 PRINTS PR01798 Succinyl-CoA synthase signature 210 223 6.8E-38 T 23-10-2018 CDG62_06955 553c3675065847e083d62167cdfe1d03 296 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 6.8E-38 T 23-10-2018 CDG62_06955 553c3675065847e083d62167cdfe1d03 296 PRINTS PR01798 Succinyl-CoA synthase signature 179 197 6.8E-38 T 23-10-2018 CDG62_06955 553c3675065847e083d62167cdfe1d03 296 PRINTS PR01798 Succinyl-CoA synthase signature 242 259 6.8E-38 T 23-10-2018 CDG62_06955 553c3675065847e083d62167cdfe1d03 296 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 290 2.9E-137 T 23-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG62_06955 553c3675065847e083d62167cdfe1d03 296 Pfam PF00549 CoA-ligase 153 271 1.8E-19 T 23-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDG62_06955 553c3675065847e083d62167cdfe1d03 296 SMART SM00881 4 100 4.0E-35 T 23-10-2018 IPR003781 CoA-binding GO:0048037 CDG62_06955 553c3675065847e083d62167cdfe1d03 296 Pfam PF02629 CoA binding domain 6 99 1.9E-29 T 23-10-2018 IPR003781 CoA-binding GO:0048037 CDG62_06955 553c3675065847e083d62167cdfe1d03 296 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 238 251 - T 23-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CDG62_06955 553c3675065847e083d62167cdfe1d03 296 PIRSF PIRSF001553 1 293 1.6E-130 T 23-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG62_06955 553c3675065847e083d62167cdfe1d03 296 SUPERFAMILY SSF51735 1 124 8.23E-40 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_06955 553c3675065847e083d62167cdfe1d03 296 SUPERFAMILY SSF52210 125 290 4.06E-56 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDG62_06955 553c3675065847e083d62167cdfe1d03 296 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 290 42.977 T 23-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG62_06955 553c3675065847e083d62167cdfe1d03 296 Gene3D G3DSA:3.40.50.720 1 125 2.4E-48 T 23-10-2018 CDG62_06955 553c3675065847e083d62167cdfe1d03 296 Gene3D G3DSA:3.40.50.261 126 291 3.3E-74 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDG62_07170 21ee448e981fd6cd1807321d1b2575d8 370 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 230 258 - T 23-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CDG62_07170 21ee448e981fd6cd1807321d1b2575d8 370 Gene3D G3DSA:1.10.530.10 206 367 3.6E-35 T 23-10-2018 CDG62_07170 21ee448e981fd6cd1807321d1b2575d8 370 SUPERFAMILY SSF53850 52 120 9.51E-8 T 23-10-2018 CDG62_07170 21ee448e981fd6cd1807321d1b2575d8 370 Gene3D G3DSA:3.40.190.10 37 185 2.7E-14 T 23-10-2018 CDG62_07170 21ee448e981fd6cd1807321d1b2575d8 370 Pfam PF01464 Transglycosylase SLT domain 213 322 2.8E-23 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 CDG62_07170 21ee448e981fd6cd1807321d1b2575d8 370 SUPERFAMILY SSF53955 167 359 4.26E-34 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG62_07170 21ee448e981fd6cd1807321d1b2575d8 370 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 57 121 4.3E-7 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG62_03655 da476dffbd34e253aa86c3d02b674c2b 647 Gene3D G3DSA:3.30.300.30 516 645 9.2E-31 T 23-10-2018 CDG62_03655 da476dffbd34e253aa86c3d02b674c2b 647 SUPERFAMILY SSF56801 12 644 3.79E-186 T 23-10-2018 CDG62_03655 da476dffbd34e253aa86c3d02b674c2b 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 22 79 5.1E-18 T 23-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CDG62_03655 da476dffbd34e253aa86c3d02b674c2b 647 Gene3D G3DSA:3.40.50.12780 48 513 6.1E-108 T 23-10-2018 CDG62_03655 da476dffbd34e253aa86c3d02b674c2b 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 18 641 5.4E-303 T 23-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CDG62_03655 da476dffbd34e253aa86c3d02b674c2b 647 Pfam PF00501 AMP-binding enzyme 81 520 3.0E-92 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG62_03655 da476dffbd34e253aa86c3d02b674c2b 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG62_03655 da476dffbd34e253aa86c3d02b674c2b 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 529 607 1.4E-25 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG62_03655 da476dffbd34e253aa86c3d02b674c2b 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 643 52.006 T 23-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CDG62_13550 43dfee65d83e2ac9f8c8a221a7c3ca48 294 Gene3D G3DSA:3.40.50.1820 29 276 3.3E-51 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_13550 43dfee65d83e2ac9f8c8a221a7c3ca48 294 SUPERFAMILY SSF53474 32 268 6.73E-43 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_13550 43dfee65d83e2ac9f8c8a221a7c3ca48 294 Pfam PF07859 alpha/beta hydrolase fold 76 156 5.4E-17 T 23-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 SMART SM00228 258 340 1.2E-15 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 SMART SM00228 369 449 1.0E-9 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 SUPERFAMILY SSF50156 239 348 1.62E-23 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 PRINTS PR00834 HtrA/DegQ protease family signature 116 136 1.4E-47 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 1.4E-47 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 PRINTS PR00834 HtrA/DegQ protease family signature 190 207 1.4E-47 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 PRINTS PR00834 HtrA/DegQ protease family signature 298 310 1.4E-47 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 PRINTS PR00834 HtrA/DegQ protease family signature 95 107 1.4E-47 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 PRINTS PR00834 HtrA/DegQ protease family signature 156 180 1.4E-47 T 23-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 SUPERFAMILY SSF50494 9 267 1.96E-61 T 23-10-2018 IPR009003 Peptidase S1, PA clan CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 Gene3D G3DSA:2.30.42.10 365 459 1.3E-16 T 23-10-2018 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 Gene3D G3DSA:2.30.42.10 253 357 1.5E-30 T 23-10-2018 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 Pfam PF13365 Trypsin-like peptidase domain 86 219 4.9E-34 T 23-10-2018 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 Gene3D G3DSA:2.40.10.120 27 251 6.4E-75 T 23-10-2018 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 28 451 6.0E-138 T 23-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 Pfam PF13180 PDZ domain 259 349 1.5E-19 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 Pfam PF13180 PDZ domain 369 450 1.4E-12 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG62_12870 b709d346fb958a0aef5d27cc0fed6cd7 459 SUPERFAMILY SSF50156 368 454 1.18E-14 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 Pfam PF07690 Major Facilitator Superfamily 8 257 3.1E-38 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 SUPERFAMILY SSF103473 3 387 2.35E-66 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 PRINTS PR01035 Tetracycline resistance protein signature 43 62 1.2E-109 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 PRINTS PR01035 Tetracycline resistance protein signature 101 122 1.2E-109 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 PRINTS PR01035 Tetracycline resistance protein signature 131 153 1.2E-109 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 PRINTS PR01035 Tetracycline resistance protein signature 159 179 1.2E-109 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 PRINTS PR01035 Tetracycline resistance protein signature 74 98 1.2E-109 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 PRINTS PR01035 Tetracycline resistance protein signature 217 234 1.2E-109 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 PRINTS PR01035 Tetracycline resistance protein signature 364 383 1.2E-109 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 PRINTS PR01035 Tetracycline resistance protein signature 299 319 1.2E-109 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 PRINTS PR01035 Tetracycline resistance protein signature 14 30 1.2E-109 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 PRINTS PR01035 Tetracycline resistance protein signature 246 266 1.2E-109 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 PRINTS PR01035 Tetracycline resistance protein signature 334 357 1.2E-109 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 PRINTS PR01035 Tetracycline resistance protein signature 274 295 1.2E-109 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_00485 8fdbc35c615e1dea6b9b58c7af5b235b 395 Gene3D G3DSA:1.20.1250.20 1 387 5.5E-71 T 23-10-2018 CDG62_16560 6fca7f41d8643261ce7a029dfcc8acaf 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 239 8.6E-53 T 23-10-2018 CDG62_16560 6fca7f41d8643261ce7a029dfcc8acaf 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG62_16560 6fca7f41d8643261ce7a029dfcc8acaf 242 Gene3D G3DSA:3.40.50.720 5 242 2.9E-70 T 23-10-2018 CDG62_16560 6fca7f41d8643261ce7a029dfcc8acaf 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 4.9E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16560 6fca7f41d8643261ce7a029dfcc8acaf 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 4.9E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16560 6fca7f41d8643261ce7a029dfcc8acaf 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.9E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16560 6fca7f41d8643261ce7a029dfcc8acaf 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 4.9E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16560 6fca7f41d8643261ce7a029dfcc8acaf 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 4.9E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16560 6fca7f41d8643261ce7a029dfcc8acaf 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 4.9E-38 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16560 6fca7f41d8643261ce7a029dfcc8acaf 242 SUPERFAMILY SSF51735 10 241 1.5E-68 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_16560 6fca7f41d8643261ce7a029dfcc8acaf 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 7.7E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16560 6fca7f41d8643261ce7a029dfcc8acaf 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 7.7E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16560 6fca7f41d8643261ce7a029dfcc8acaf 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 7.7E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_00955 87942a1f6f80b2da478ee6b7133cfc6f 426 Gene3D G3DSA:3.30.70.100 156 235 2.3E-7 T 23-10-2018 CDG62_00955 87942a1f6f80b2da478ee6b7133cfc6f 426 Gene3D G3DSA:3.30.70.100 82 155 2.6E-7 T 23-10-2018 CDG62_00955 87942a1f6f80b2da478ee6b7133cfc6f 426 SUPERFAMILY SSF55008 88 151 8.25E-11 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDG62_00955 87942a1f6f80b2da478ee6b7133cfc6f 426 SUPERFAMILY SSF161111 250 423 9.68E-31 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG62_00955 87942a1f6f80b2da478ee6b7133cfc6f 426 SUPERFAMILY SSF55008 165 228 1.44E-10 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDG62_00955 87942a1f6f80b2da478ee6b7133cfc6f 426 Pfam PF01545 Cation efflux family 254 423 1.0E-11 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG62_00955 87942a1f6f80b2da478ee6b7133cfc6f 426 Gene3D G3DSA:1.20.1510.10 248 425 7.3E-13 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG62_05915 e63c4248040ffe471295ea1f4432cd30 336 Pfam PF12833 Helix-turn-helix domain 255 331 1.1E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_05915 e63c4248040ffe471295ea1f4432cd30 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 1.8E-6 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_05915 e63c4248040ffe471295ea1f4432cd30 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 1.8E-6 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_05915 e63c4248040ffe471295ea1f4432cd30 336 Gene3D G3DSA:1.10.10.60 227 334 1.4E-25 T 23-10-2018 CDG62_05915 e63c4248040ffe471295ea1f4432cd30 336 SUPERFAMILY SSF46689 283 331 3.45E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_05915 e63c4248040ffe471295ea1f4432cd30 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 204 3.8E-46 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG62_05915 e63c4248040ffe471295ea1f4432cd30 336 SMART SM00342 248 330 7.2E-23 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_15165 0cd9df37194b6150eceda44dd71e80a0 274 Pfam PF09339 IclR helix-turn-helix domain 30 80 1.4E-13 T 23-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CDG62_15165 0cd9df37194b6150eceda44dd71e80a0 274 Pfam PF01614 Bacterial transcriptional regulator 148 272 1.5E-43 T 23-10-2018 IPR014757 Transcription regulator IclR, C-terminal CDG62_15165 0cd9df37194b6150eceda44dd71e80a0 274 Gene3D G3DSA:3.30.450.40 95 274 5.4E-51 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG62_15165 0cd9df37194b6150eceda44dd71e80a0 274 Gene3D G3DSA:1.10.10.10 13 92 9.5E-15 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15165 0cd9df37194b6150eceda44dd71e80a0 274 SUPERFAMILY SSF55781 96 272 8.5E-42 T 23-10-2018 CDG62_15165 0cd9df37194b6150eceda44dd71e80a0 274 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 23 274 1.1E-99 T 23-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 CDG62_15165 0cd9df37194b6150eceda44dd71e80a0 274 SUPERFAMILY SSF46785 29 97 1.09E-9 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_15165 0cd9df37194b6150eceda44dd71e80a0 274 SMART SM00346 27 115 5.0E-18 T 23-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CDG62_15725 aa771fb91dd7ebb916d08c7b7658f091 414 Pfam PF13356 Arm DNA-binding domain 16 97 8.1E-13 T 23-10-2018 IPR025166 Integrase, DNA-binding domain CDG62_15725 aa771fb91dd7ebb916d08c7b7658f091 414 Pfam PF00589 Phage integrase family 225 374 3.5E-19 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG62_15725 aa771fb91dd7ebb916d08c7b7658f091 414 Gene3D G3DSA:3.30.160.390 10 109 6.3E-22 T 23-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CDG62_15725 aa771fb91dd7ebb916d08c7b7658f091 414 SUPERFAMILY SSF56349 109 394 1.0E-48 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG62_15725 aa771fb91dd7ebb916d08c7b7658f091 414 Gene3D G3DSA:1.10.150.130 110 223 6.1E-19 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG62_15725 aa771fb91dd7ebb916d08c7b7658f091 414 Gene3D G3DSA:1.10.443.10 224 404 1.1E-14 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG62_03555 a0458ad0505664f69d636727cd816ccd 300 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 297 2.7E-111 T 23-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDG62_03555 a0458ad0505664f69d636727cd816ccd 300 SUPERFAMILY SSF54211 3 125 5.54E-37 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_03555 a0458ad0505664f69d636727cd816ccd 300 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 42.564 T 23-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDG62_03555 a0458ad0505664f69d636727cd816ccd 300 Gene3D G3DSA:3.30.230.20 1 127 1.4E-42 T 23-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDG62_03555 a0458ad0505664f69d636727cd816ccd 300 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 274 9.0E-98 T 23-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDG62_03555 a0458ad0505664f69d636727cd816ccd 300 Gene3D G3DSA:3.30.1700.10 128 300 3.8E-62 T 23-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 CDG62_03555 a0458ad0505664f69d636727cd816ccd 300 SUPERFAMILY SSF54211 133 277 6.83E-48 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_09035 f2b7603e8eccf6ca4b6790eae374f8d6 161 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 16 153 1.6E-56 T 23-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDG62_09035 f2b7603e8eccf6ca4b6790eae374f8d6 161 Pfam PF07977 FabA-like domain 25 149 2.1E-31 T 23-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDG62_09035 f2b7603e8eccf6ca4b6790eae374f8d6 161 SUPERFAMILY SSF54637 18 154 2.8E-44 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_09035 f2b7603e8eccf6ca4b6790eae374f8d6 161 Gene3D G3DSA:3.10.129.10 9 158 1.2E-54 T 23-10-2018 CDG62_09035 f2b7603e8eccf6ca4b6790eae374f8d6 161 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 16 157 31.29 T 23-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDG62_12945 0e8da7a6f7810010773b7c45f034e33b 236 Pfam PF13394 4Fe-4S single cluster domain 39 120 3.0E-11 T 23-10-2018 CDG62_12945 0e8da7a6f7810010773b7c45f034e33b 236 Gene3D G3DSA:3.20.20.70 18 230 4.5E-35 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_12945 0e8da7a6f7810010773b7c45f034e33b 236 SUPERFAMILY SSF102114 40 118 4.32E-14 T 23-10-2018 CDG62_12945 0e8da7a6f7810010773b7c45f034e33b 236 PIRSF PIRSF000370 16 236 3.0E-63 T 23-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CDG62_12945 0e8da7a6f7810010773b7c45f034e33b 236 Pfam PF04055 Radical SAM superfamily 42 130 1.6E-12 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG62_12945 0e8da7a6f7810010773b7c45f034e33b 236 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 18 236 5.6E-99 T 23-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE CDG62_12945 0e8da7a6f7810010773b7c45f034e33b 236 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 18 233 36.292 T 23-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CDG62_17905 45c488ab526d813aa66ec332d917183d 294 Pfam PF00561 alpha/beta hydrolase fold 28 137 1.8E-13 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_17905 45c488ab526d813aa66ec332d917183d 294 PRINTS PR00412 Epoxide hydrolase signature 262 284 1.3E-5 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG62_17905 45c488ab526d813aa66ec332d917183d 294 PRINTS PR00412 Epoxide hydrolase signature 99 112 1.3E-5 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG62_17905 45c488ab526d813aa66ec332d917183d 294 PRINTS PR00412 Epoxide hydrolase signature 33 51 1.3E-5 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG62_17905 45c488ab526d813aa66ec332d917183d 294 SUPERFAMILY SSF53474 6 287 4.82E-41 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_17905 45c488ab526d813aa66ec332d917183d 294 Gene3D G3DSA:3.40.50.1820 2 288 4.8E-40 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_09045 f62c6cfb540256acdced8d82d1957f9c 281 SUPERFAMILY SSF48452 162 277 3.6E-5 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_09045 f62c6cfb540256acdced8d82d1957f9c 281 Pfam PF16331 TolA binding protein trimerisation 55 108 2.2E-7 T 23-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 CDG62_09045 f62c6cfb540256acdced8d82d1957f9c 281 Pfam PF13174 Tetratricopeptide repeat 202 235 0.032 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG62_09045 f62c6cfb540256acdced8d82d1957f9c 281 Pfam PF13174 Tetratricopeptide repeat 168 196 0.087 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG62_09045 f62c6cfb540256acdced8d82d1957f9c 281 Gene3D G3DSA:1.25.40.10 163 281 1.1E-16 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_18835 499245e04bc7038d0338d8153e8e1b3c 454 Gene3D G3DSA:3.90.550.10 1 224 5.2E-65 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_18835 499245e04bc7038d0338d8153e8e1b3c 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 315 348 1.1E-5 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_18835 499245e04bc7038d0338d8153e8e1b3c 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.7E-8 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_18835 499245e04bc7038d0338d8153e8e1b3c 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 262 297 1.7E-4 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_18835 499245e04bc7038d0338d8153e8e1b3c 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 1.1E-194 T 23-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 CDG62_18835 499245e04bc7038d0338d8153e8e1b3c 454 SUPERFAMILY SSF53448 1 249 4.28E-63 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_18835 499245e04bc7038d0338d8153e8e1b3c 454 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 23-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CDG62_18835 499245e04bc7038d0338d8153e8e1b3c 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.441 T 23-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 CDG62_18835 499245e04bc7038d0338d8153e8e1b3c 454 SUPERFAMILY SSF51161 251 438 1.48E-49 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG62_18835 499245e04bc7038d0338d8153e8e1b3c 454 Pfam PF12804 MobA-like NTP transferase domain 5 132 8.7E-21 T 23-10-2018 IPR025877 MobA-like NTP transferase CDG62_18835 499245e04bc7038d0338d8153e8e1b3c 454 Gene3D G3DSA:2.160.10.10 225 453 3.8E-71 T 23-10-2018 CDG62_12035 d827c9594cac447dcfc35552026137f9 786 Gene3D G3DSA:2.170.130.10 31 143 1.8E-17 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_12035 d827c9594cac447dcfc35552026137f9 786 SUPERFAMILY SSF56935 52 784 1.79E-60 T 23-10-2018 CDG62_12035 d827c9594cac447dcfc35552026137f9 786 Pfam PF00593 TonB dependent receptor 313 784 9.2E-33 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_12035 d827c9594cac447dcfc35552026137f9 786 Gene3D G3DSA:2.40.170.20 290 785 4.3E-44 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_12035 d827c9594cac447dcfc35552026137f9 786 Pfam PF07715 TonB-dependent Receptor Plug Domain 39 135 2.2E-13 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_17945 5feada58700990efcb5e1539d5c9f333 168 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 23-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_17945 5feada58700990efcb5e1539d5c9f333 168 Gene3D G3DSA:3.30.70.1730 1 126 1.1E-31 T 23-10-2018 CDG62_17945 5feada58700990efcb5e1539d5c9f333 168 Pfam PF00466 Ribosomal protein L10 6 103 9.8E-24 T 23-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CDG62_17945 5feada58700990efcb5e1539d5c9f333 168 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 163 26.048 T 23-10-2018 IPR022973 Ribosomal protein L10 CDG62_17945 5feada58700990efcb5e1539d5c9f333 168 SUPERFAMILY SSF160369 5 162 3.4E-44 T 23-10-2018 CDG62_19055 2071f4d66e33ea96723c4bb8e2b7beed 186 SUPERFAMILY SSF53167 4 182 2.36E-33 T 23-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 CDG62_19055 2071f4d66e33ea96723c4bb8e2b7beed 186 Pfam PF01048 Phosphorylase superfamily 27 181 2.7E-14 T 23-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CDG62_19055 2071f4d66e33ea96723c4bb8e2b7beed 186 Gene3D G3DSA:3.40.50.1580 2 186 1.9E-37 T 23-10-2018 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Gene3D G3DSA:3.90.1800.10 1271 1324 7.8E-11 T 23-10-2018 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Gene3D G3DSA:3.90.1110.10 320 450 1.2E-32 T 23-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Gene3D G3DSA:2.40.50.100 723 797 3.2E-30 T 23-10-2018 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Gene3D G3DSA:2.40.50.150 842 962 3.8E-44 T 23-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1361 12.251 T 23-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Pfam PF04563 RNA polymerase beta subunit 26 508 1.2E-39 T 23-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Gene3D G3DSA:3.90.1100.10 451 629 3.7E-69 T 23-10-2018 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Gene3D G3DSA:3.90.1100.10 18 159 1.2E-51 T 23-10-2018 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Gene3D G3DSA:2.40.270.10 800 841 5.3E-6 T 23-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Pfam PF04560 RNA polymerase Rpb2, domain 7 1285 1359 4.8E-26 T 23-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 352 463 1.8E-14 T 23-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 153 225 1.2E-6 T 23-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Pfam PF10385 RNA polymerase beta subunit external 1 domain 600 665 2.0E-22 T 23-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Gene3D G3DSA:3.90.1100.10 657 722 2.4E-20 T 23-10-2018 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Pfam PF00562 RNA polymerase Rpb2, domain 6 727 1283 1.6E-158 T 23-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1358 0.0 T 23-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Gene3D G3DSA:3.90.1110.10 160 256 4.6E-28 T 23-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Pfam PF04565 RNA polymerase Rpb2, domain 3 522 589 3.5E-30 T 23-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1084 1096 - T 23-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 SUPERFAMILY SSF64484 12 1360 0.0 T 23-10-2018 CDG62_17935 f39f3f7b3a21b1bc9804259152e96be8 1362 Gene3D G3DSA:2.40.270.10 1054 1261 1.6E-85 T 23-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CDG62_12715 5eeb734839570ca00984e0be4327596c 377 PIRSF PIRSF000729 10 377 2.0E-129 T 23-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CDG62_12715 5eeb734839570ca00984e0be4327596c 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 15 375 4.0E-128 T 23-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDG62_12715 5eeb734839570ca00984e0be4327596c 377 SMART SM00359 286 360 2.5E-14 T 23-10-2018 IPR002478 PUA domain GO:0003723 CDG62_12715 5eeb734839570ca00984e0be4327596c 377 PRINTS PR00474 Glutamate 5-kinase family signature 158 185 1.5E-47 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDG62_12715 5eeb734839570ca00984e0be4327596c 377 PRINTS PR00474 Glutamate 5-kinase family signature 126 147 1.5E-47 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDG62_12715 5eeb734839570ca00984e0be4327596c 377 PRINTS PR00474 Glutamate 5-kinase family signature 52 66 1.5E-47 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDG62_12715 5eeb734839570ca00984e0be4327596c 377 PRINTS PR00474 Glutamate 5-kinase family signature 86 114 1.5E-47 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDG62_12715 5eeb734839570ca00984e0be4327596c 377 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 1.5E-47 T 23-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CDG62_12715 5eeb734839570ca00984e0be4327596c 377 Pfam PF00696 Amino acid kinase family 15 244 4.9E-47 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDG62_12715 5eeb734839570ca00984e0be4327596c 377 SUPERFAMILY SSF53633 15 265 1.96E-73 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG62_12715 5eeb734839570ca00984e0be4327596c 377 Pfam PF01472 PUA domain 286 360 1.3E-19 T 23-10-2018 IPR002478 PUA domain GO:0003723 CDG62_12715 5eeb734839570ca00984e0be4327596c 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 23-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDG62_12715 5eeb734839570ca00984e0be4327596c 377 Gene3D G3DSA:3.40.1160.10 5 274 7.7E-94 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG62_12715 5eeb734839570ca00984e0be4327596c 377 Gene3D G3DSA:2.30.130.10 275 377 1.0E-29 T 23-10-2018 IPR036974 PUA domain superfamily GO:0003723 CDG62_12715 5eeb734839570ca00984e0be4327596c 377 SUPERFAMILY SSF88697 286 376 1.71E-19 T 23-10-2018 IPR015947 PUA-like superfamily CDG62_12715 5eeb734839570ca00984e0be4327596c 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 15 268 35.964 T 23-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CDG62_19130 17e79b1ee4d9e42026f723f2b68bc59b 410 Gene3D G3DSA:1.10.240.10 227 334 4.0E-30 T 23-10-2018 CDG62_19130 17e79b1ee4d9e42026f723f2b68bc59b 410 SUPERFAMILY SSF52374 14 318 4.35E-95 T 23-10-2018 CDG62_19130 17e79b1ee4d9e42026f723f2b68bc59b 410 Gene3D G3DSA:3.10.290.10 335 408 1.8E-6 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDG62_19130 17e79b1ee4d9e42026f723f2b68bc59b 410 Gene3D G3DSA:3.40.50.620 13 226 4.9E-75 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_19130 17e79b1ee4d9e42026f723f2b68bc59b 410 Pfam PF00579 tRNA synthetases class I (W and Y) 39 319 1.5E-76 T 23-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_19130 17e79b1ee4d9e42026f723f2b68bc59b 410 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 51 61 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_19130 17e79b1ee4d9e42026f723f2b68bc59b 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 170 185 4.0E-24 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDG62_19130 17e79b1ee4d9e42026f723f2b68bc59b 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 55 77 4.0E-24 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDG62_19130 17e79b1ee4d9e42026f723f2b68bc59b 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 4.0E-24 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDG62_19130 17e79b1ee4d9e42026f723f2b68bc59b 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 4.0E-24 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDG62_19130 17e79b1ee4d9e42026f723f2b68bc59b 410 SUPERFAMILY SSF55174 333 408 5.76E-9 T 23-10-2018 CDG62_19130 17e79b1ee4d9e42026f723f2b68bc59b 410 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 14 407 3.6E-115 T 23-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CDG62_19130 17e79b1ee4d9e42026f723f2b68bc59b 410 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 11 408 45.242 T 23-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 CDG62_18725 614a01fc8ff56ae31942fa06e6a9fd82 185 Pfam PF11659 Protein of unknown function (DUF3261) 45 172 5.8E-25 T 23-10-2018 IPR021675 Protein of unknown function DUF3261 CDG62_02535 59c1db73d80ee3ca4e51ce40c59c6c18 91 Pfam PF00403 Heavy-metal-associated domain 25 85 1.8E-17 T 23-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDG62_02535 59c1db73d80ee3ca4e51ce40c59c6c18 91 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 90 8.7E-44 T 23-10-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 CDG62_02535 59c1db73d80ee3ca4e51ce40c59c6c18 91 PRINTS PR00946 Mercury scavenger protein signature 31 47 3.6E-55 T 23-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CDG62_02535 59c1db73d80ee3ca4e51ce40c59c6c18 91 PRINTS PR00946 Mercury scavenger protein signature 20 31 3.6E-55 T 23-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CDG62_02535 59c1db73d80ee3ca4e51ce40c59c6c18 91 PRINTS PR00946 Mercury scavenger protein signature 2 20 3.6E-55 T 23-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CDG62_02535 59c1db73d80ee3ca4e51ce40c59c6c18 91 PRINTS PR00946 Mercury scavenger protein signature 47 62 3.6E-55 T 23-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CDG62_02535 59c1db73d80ee3ca4e51ce40c59c6c18 91 PRINTS PR00946 Mercury scavenger protein signature 76 90 3.6E-55 T 23-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CDG62_02535 59c1db73d80ee3ca4e51ce40c59c6c18 91 PRINTS PR00946 Mercury scavenger protein signature 62 76 3.6E-55 T 23-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CDG62_02535 59c1db73d80ee3ca4e51ce40c59c6c18 91 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 23-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CDG62_02535 59c1db73d80ee3ca4e51ce40c59c6c18 91 SUPERFAMILY SSF55008 17 88 8.51E-22 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDG62_02535 59c1db73d80ee3ca4e51ce40c59c6c18 91 Gene3D G3DSA:3.30.70.100 20 90 1.3E-23 T 23-10-2018 CDG62_12390 fe306f609c027d9f6f88a98a815531d0 972 SUPERFAMILY SSF52540 342 492 1.19E-18 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12390 fe306f609c027d9f6f88a98a815531d0 972 Pfam PF01443 Viral (Superfamily 1) RNA helicase 655 709 3.0E-5 T 23-10-2018 IPR027351 (+) RNA virus helicase core domain GO:0005524 CDG62_12390 fe306f609c027d9f6f88a98a815531d0 972 Gene3D G3DSA:2.30.30.940 583 667 9.1E-48 T 23-10-2018 CDG62_12390 fe306f609c027d9f6f88a98a815531d0 972 Gene3D G3DSA:3.40.50.300 501 710 9.1E-48 T 23-10-2018 CDG62_12390 fe306f609c027d9f6f88a98a815531d0 972 Gene3D G3DSA:3.40.50.300 337 500 9.1E-48 T 23-10-2018 CDG62_12390 fe306f609c027d9f6f88a98a815531d0 972 SUPERFAMILY SSF52540 455 712 2.02E-29 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12390 fe306f609c027d9f6f88a98a815531d0 972 Pfam PF03389 MobA/MobL family 42 208 3.1E-26 T 23-10-2018 IPR005053 MobA/MobL protein CDG62_12390 fe306f609c027d9f6f88a98a815531d0 972 Gene3D G3DSA:3.30.930.30 2 188 4.5E-54 T 23-10-2018 CDG62_12390 fe306f609c027d9f6f88a98a815531d0 972 Pfam PF13604 AAA domain 346 538 1.5E-44 T 23-10-2018 CDG62_14570 215722ea4bcab44936cd53db257a0468 424 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 168 409 2.0E-96 T 23-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CDG62_14570 215722ea4bcab44936cd53db257a0468 424 Hamap MF_02040 Iron-sulfur cluster carrier protein. 160 410 36.457 T 23-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein CDG62_14570 215722ea4bcab44936cd53db257a0468 424 Gene3D G3DSA:3.40.50.300 159 408 3.4E-78 T 23-10-2018 CDG62_14570 215722ea4bcab44936cd53db257a0468 424 ProSitePatterns PS01215 Mrp family signature. 275 291 - T 23-10-2018 IPR000808 Mrp, conserved site GO:0005524 CDG62_14570 215722ea4bcab44936cd53db257a0468 424 SUPERFAMILY SSF52540 162 395 8.6E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12890 11aac048da17535064936e8f627735e9 351 Pfam PF02618 YceG-like family 55 339 2.8E-77 T 23-10-2018 IPR003770 Endolytic murein transglycosylase CDG62_12890 11aac048da17535064936e8f627735e9 351 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 27 349 31.545 T 23-10-2018 IPR003770 Endolytic murein transglycosylase CDG62_12890 11aac048da17535064936e8f627735e9 351 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 19 348 2.1E-81 T 23-10-2018 IPR003770 Endolytic murein transglycosylase CDG62_12890 11aac048da17535064936e8f627735e9 351 Gene3D G3DSA:3.30.160.60 314 351 5.5E-17 T 23-10-2018 CDG62_16545 bed6f86f878ca6b520c6788b28bb88ca 375 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 371 1.1E-71 T 23-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CDG62_16545 bed6f86f878ca6b520c6788b28bb88ca 375 SUPERFAMILY SSF51735 136 322 1.14E-36 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_16545 bed6f86f878ca6b520c6788b28bb88ca 375 Gene3D G3DSA:3.40.50.720 3 369 7.0E-129 T 23-10-2018 CDG62_16545 bed6f86f878ca6b520c6788b28bb88ca 375 Gene3D G3DSA:3.40.50.720 136 323 7.0E-129 T 23-10-2018 CDG62_16545 bed6f86f878ca6b520c6788b28bb88ca 375 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 2.1E-37 T 23-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CDG62_16545 bed6f86f878ca6b520c6788b28bb88ca 375 SUPERFAMILY SSF52283 1 167 1.7E-47 T 23-10-2018 CDG62_16545 bed6f86f878ca6b520c6788b28bb88ca 375 SMART SM01002 145 316 2.7E-73 T 23-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CDG62_16545 bed6f86f878ca6b520c6788b28bb88ca 375 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 23-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CDG62_16545 bed6f86f878ca6b520c6788b28bb88ca 375 SMART SM01003 4 136 3.2E-52 T 23-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CDG62_16545 bed6f86f878ca6b520c6788b28bb88ca 375 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 169 194 - T 23-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 CDG62_10790 41b62fd0a49829c9360ad38fe043dcd7 368 SUPERFAMILY SSF47364 63 143 1.83E-19 T 23-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 CDG62_10790 41b62fd0a49829c9360ad38fe043dcd7 368 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 338 351 - T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG62_10790 41b62fd0a49829c9360ad38fe043dcd7 368 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 92 365 59.953 T 23-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CDG62_10790 41b62fd0a49829c9360ad38fe043dcd7 368 Pfam PF00448 SRP54-type protein, GTPase domain 165 364 4.2E-76 T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG62_10790 41b62fd0a49829c9360ad38fe043dcd7 368 Pfam PF02881 SRP54-type protein, helical bundle domain 84 145 9.5E-11 T 23-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG62_10790 41b62fd0a49829c9360ad38fe043dcd7 368 SMART SM00962 164 365 5.7E-120 T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG62_10790 41b62fd0a49829c9360ad38fe043dcd7 368 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 93 364 2.3E-106 T 23-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CDG62_10790 41b62fd0a49829c9360ad38fe043dcd7 368 SMART SM00382 163 343 2.5E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_10790 41b62fd0a49829c9360ad38fe043dcd7 368 SMART SM00963 68 149 1.9E-23 T 23-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG62_10790 41b62fd0a49829c9360ad38fe043dcd7 368 Gene3D G3DSA:1.20.120.140 65 363 1.7E-114 T 23-10-2018 CDG62_10790 41b62fd0a49829c9360ad38fe043dcd7 368 SUPERFAMILY SSF52540 162 365 1.22E-51 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10790 41b62fd0a49829c9360ad38fe043dcd7 368 Gene3D G3DSA:3.40.50.300 161 353 1.7E-114 T 23-10-2018 CDG62_01705 829e165c529180cd28bf2ac84fff3c84 252 SMART SM00382 80 217 1.2E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_01705 829e165c529180cd28bf2ac84fff3c84 252 Pfam PF01695 IstB-like ATP binding protein 37 213 1.5E-66 T 23-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CDG62_01705 829e165c529180cd28bf2ac84fff3c84 252 SUPERFAMILY SSF52540 78 215 5.24E-22 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_01705 829e165c529180cd28bf2ac84fff3c84 252 PIRSF PIRSF003073 1 235 6.6E-69 T 23-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CDG62_01705 829e165c529180cd28bf2ac84fff3c84 252 Gene3D G3DSA:3.40.50.300 45 230 8.2E-44 T 23-10-2018 CDG62_05220 4369ac5226f1895ec70ba093b7a66a62 444 Gene3D G3DSA:1.10.287.470 94 185 6.7E-80 T 23-10-2018 CDG62_05220 4369ac5226f1895ec70ba093b7a66a62 444 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 328 4.1E-41 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG62_05220 4369ac5226f1895ec70ba093b7a66a62 444 Gene3D G3DSA:2.40.420.20 44 326 6.7E-80 T 23-10-2018 CDG62_05220 4369ac5226f1895ec70ba093b7a66a62 444 Gene3D G3DSA:2.40.420.20 366 440 1.2E-7 T 23-10-2018 CDG62_05220 4369ac5226f1895ec70ba093b7a66a62 444 Gene3D G3DSA:2.40.50.100 60 222 6.7E-80 T 23-10-2018 CDG62_05220 4369ac5226f1895ec70ba093b7a66a62 444 Gene3D G3DSA:2.40.30.170 49 310 6.7E-80 T 23-10-2018 CDG62_05220 4369ac5226f1895ec70ba093b7a66a62 444 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 303 3.3E-15 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG62_05220 4369ac5226f1895ec70ba093b7a66a62 444 SUPERFAMILY SSF111369 52 257 4.84E-24 T 23-10-2018 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 SUPERFAMILY SSF82866 816 1039 4.84E-46 T 23-10-2018 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 SUPERFAMILY SSF82714 735 820 7.72E-15 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 SUPERFAMILY SSF82866 298 486 4.45E-37 T 23-10-2018 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 Gene3D G3DSA:3.30.2090.10 181 270 1.5E-254 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 Gene3D G3DSA:3.30.70.1320 138 328 1.5E-254 T 23-10-2018 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 Gene3D G3DSA:3.30.70.1440 681 880 1.5E-254 T 23-10-2018 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 Pfam PF00873 AcrB/AcrD/AcrF family 7 1033 1.5E-164 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 Gene3D G3DSA:3.30.70.1430 42 828 1.5E-254 T 23-10-2018 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 Gene3D G3DSA:1.20.1640.10 528 1032 1.5E-254 T 23-10-2018 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.3E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 2.3E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 2.3E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 2.3E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 2.3E-22 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 SUPERFAMILY SSF82714 187 266 1.31E-12 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 SUPERFAMILY SSF82693 139 325 6.28E-16 T 23-10-2018 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 Gene3D G3DSA:1.20.1640.10 13 507 1.5E-254 T 23-10-2018 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 SUPERFAMILY SSF82693 582 671 3.92E-5 T 23-10-2018 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 Gene3D G3DSA:3.30.70.1430 582 680 1.5E-254 T 23-10-2018 CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 Gene3D G3DSA:3.30.2090.10 732 820 1.5E-254 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_03125 266b3e89434ee26c0a27d163286c05d3 1045 SUPERFAMILY SSF82693 42 138 5.58E-19 T 23-10-2018 CDG62_05300 f67fe158ecb32771d87bcd46e7ef134d 66 SUPERFAMILY SSF140319 3 64 8.5E-27 T 23-10-2018 IPR036762 IscX-like superfamily CDG62_05300 f67fe158ecb32771d87bcd46e7ef134d 66 PIRSF PIRSF039003 3 66 1.8E-35 T 23-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CDG62_05300 f67fe158ecb32771d87bcd46e7ef134d 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 4.7E-32 T 23-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CDG62_05300 f67fe158ecb32771d87bcd46e7ef134d 66 Gene3D G3DSA:1.10.10.600 1 66 2.1E-28 T 23-10-2018 IPR036762 IscX-like superfamily CDG62_05300 f67fe158ecb32771d87bcd46e7ef134d 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 65 6.0E-32 T 23-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CDG62_10260 9d8ea442d27a7993dda08501f16329aa 335 SMART SM00342 252 334 1.4E-13 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_10260 9d8ea442d27a7993dda08501f16329aa 335 Pfam PF12833 Helix-turn-helix domain 259 333 7.0E-14 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_10260 9d8ea442d27a7993dda08501f16329aa 335 Gene3D G3DSA:1.10.10.60 231 335 3.6E-20 T 23-10-2018 CDG62_10260 9d8ea442d27a7993dda08501f16329aa 335 SUPERFAMILY SSF46689 290 333 9.41E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_10260 9d8ea442d27a7993dda08501f16329aa 335 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 19 205 1.7E-16 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 Gene3D G3DSA:3.50.50.60 136 434 5.2E-90 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 387 409 1.6E-18 T 23-10-2018 CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 154 1.6E-18 T 23-10-2018 CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 249 1.6E-18 T 23-10-2018 CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 294 1.6E-18 T 23-10-2018 CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 362 378 1.6E-18 T 23-10-2018 CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 Gene3D G3DSA:3.30.390.30 446 522 2.0E-6 T 23-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 SUPERFAMILY SSF51905 130 322 3.58E-46 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 SUPERFAMILY SSF50022 11 124 9.4E-36 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 134 412 3.3E-56 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 156 8.5E-11 T 23-10-2018 CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 409 8.5E-11 T 23-10-2018 CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 377 8.5E-11 T 23-10-2018 CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 301 8.5E-11 T 23-10-2018 CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 12 114 7.4E-34 T 23-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 SUPERFAMILY SSF51905 272 436 1.83E-29 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 Gene3D G3DSA:3.50.50.60 244 369 5.2E-90 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 Pfam PF13806 Rieske-like [2Fe-2S] domain 12 115 1.2E-37 T 23-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CDG62_08415 b74683932afd16396d9d94a2a4d8237e 536 Gene3D G3DSA:2.102.10.10 3 116 4.3E-35 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG62_03180 9867591739051ff041f6454da7bac442 184 SUPERFAMILY SSF51261 54 183 5.23E-34 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG62_03180 9867591739051ff041f6454da7bac442 184 Pfam PF01551 Peptidase family M23 78 172 1.0E-23 T 23-10-2018 IPR016047 Peptidase M23 CDG62_03180 9867591739051ff041f6454da7bac442 184 Gene3D G3DSA:2.70.70.10 32 184 9.7E-48 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 Hamap MF_00195 GTPase Der [der]. 2 435 37.972 T 23-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 432 3.0E-178 T 23-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 151 4.1E-21 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 178 335 3.7E-23 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 Gene3D G3DSA:3.30.300.20 352 434 3.7E-20 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 Gene3D G3DSA:3.40.50.300 171 349 1.3E-48 T 23-10-2018 CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 Pfam PF01926 50S ribosome-binding GTPase 179 296 6.2E-24 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 Pfam PF01926 50S ribosome-binding GTPase 5 119 5.5E-24 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 SUPERFAMILY SSF52540 137 438 1.23E-64 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 SUPERFAMILY SSF52540 4 168 2.43E-44 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 352 432 2.7E-26 T 23-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.1E-8 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 1.1E-8 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 PIRSF PIRSF006485 1 440 1.3E-173 T 23-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 CDG62_05345 dd1a363675e5fe9bed0cc2ad6590b2df 469 Gene3D G3DSA:3.40.50.300 1 161 3.2E-43 T 23-10-2018 CDG62_10065 cb0e8a6319444c9f2ee2ec0288144953 111 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 2 78 1.1E-17 T 23-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CDG62_10065 cb0e8a6319444c9f2ee2ec0288144953 111 Pfam PF04221 RelB antitoxin 6 76 3.0E-13 T 23-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CDG62_10065 cb0e8a6319444c9f2ee2ec0288144953 111 Gene3D G3DSA:1.10.1220.10 2 52 2.2E-14 T 23-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CDG62_13025 3cf1149c49292a40287c4c86a1f3f05a 200 SUPERFAMILY SSF47781 65 134 1.47E-21 T 23-10-2018 IPR010994 RuvA domain 2-like CDG62_13025 3cf1149c49292a40287c4c86a1f3f05a 200 Pfam PF07499 RuvA, C-terminal domain 155 198 1.9E-11 T 23-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CDG62_13025 3cf1149c49292a40287c4c86a1f3f05a 200 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 197 1.4E-53 T 23-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CDG62_13025 3cf1149c49292a40287c4c86a1f3f05a 200 SUPERFAMILY SSF50249 1 62 5.31E-16 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_13025 3cf1149c49292a40287c4c86a1f3f05a 200 Pfam PF01330 RuvA N terminal domain 1 61 1.7E-18 T 23-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CDG62_13025 3cf1149c49292a40287c4c86a1f3f05a 200 Gene3D G3DSA:1.10.150.20 66 138 9.2E-26 T 23-10-2018 CDG62_13025 3cf1149c49292a40287c4c86a1f3f05a 200 Pfam PF14520 Helix-hairpin-helix domain 71 129 8.8E-19 T 23-10-2018 CDG62_13025 3cf1149c49292a40287c4c86a1f3f05a 200 Gene3D G3DSA:1.10.8.10 152 198 2.5E-12 T 23-10-2018 CDG62_13025 3cf1149c49292a40287c4c86a1f3f05a 200 SMART SM00278 72 91 0.52 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG62_13025 3cf1149c49292a40287c4c86a1f3f05a 200 SMART SM00278 107 126 0.13 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG62_13025 3cf1149c49292a40287c4c86a1f3f05a 200 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 199 29.405 T 23-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CDG62_13025 3cf1149c49292a40287c4c86a1f3f05a 200 Gene3D G3DSA:2.40.50.140 1 65 2.0E-22 T 23-10-2018 CDG62_13025 3cf1149c49292a40287c4c86a1f3f05a 200 SUPERFAMILY SSF46929 153 198 1.7E-8 T 23-10-2018 IPR036267 RuvA, C-terminal domain superfamily CDG62_03580 cda1c6b9191e5be480b08eac254e33b2 191 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.2E-18 T 23-10-2018 IPR001727 Gdt1 family CDG62_03580 cda1c6b9191e5be480b08eac254e33b2 191 Pfam PF01169 Uncharacterized protein family UPF0016 107 181 1.1E-22 T 23-10-2018 IPR001727 Gdt1 family CDG62_14460 f0d013a21582a890552a600042244796 292 Pfam PF08907 Domain of unknown function (DUF1853) 22 261 4.2E-48 T 23-10-2018 IPR015003 Protein of unknown function DUF1853 CDG62_06450 ecba3e5a6923b8a5ede3e6c592bb1308 182 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 18.338 T 23-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 CDG62_06450 ecba3e5a6923b8a5ede3e6c592bb1308 182 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 120 8.8E-29 T 23-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06450 ecba3e5a6923b8a5ede3e6c592bb1308 182 Gene3D G3DSA:1.20.58.1610 1 121 6.4E-34 T 23-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_11380 ad9abfef3db590ac68a8685f6d89fbc5 342 Gene3D G3DSA:1.10.10.60 236 340 3.9E-26 T 23-10-2018 CDG62_11380 ad9abfef3db590ac68a8685f6d89fbc5 342 Pfam PF12833 Helix-turn-helix domain 262 338 1.1E-19 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_11380 ad9abfef3db590ac68a8685f6d89fbc5 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 208 1.2E-26 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG62_11380 ad9abfef3db590ac68a8685f6d89fbc5 342 SMART SM00342 255 337 4.9E-25 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_11380 ad9abfef3db590ac68a8685f6d89fbc5 342 SUPERFAMILY SSF46689 290 339 1.79E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_11380 ad9abfef3db590ac68a8685f6d89fbc5 342 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 2.2E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_11380 ad9abfef3db590ac68a8685f6d89fbc5 342 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 2.2E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_14085 082567dc9d81f36125391092781451a4 538 Pfam PF00009 Elongation factor Tu GTP binding domain 24 213 1.1E-45 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_14085 082567dc9d81f36125391092781451a4 538 SUPERFAMILY SSF52540 16 236 2.96E-59 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_14085 082567dc9d81f36125391092781451a4 538 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 212 4.5E-15 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG62_14085 082567dc9d81f36125391092781451a4 538 Gene3D G3DSA:2.40.30.10 331 434 5.7E-34 T 23-10-2018 CDG62_14085 082567dc9d81f36125391092781451a4 538 Gene3D G3DSA:3.40.50.300 1 239 6.2E-76 T 23-10-2018 CDG62_14085 082567dc9d81f36125391092781451a4 538 SUPERFAMILY SSF50465 333 435 4.32E-32 T 23-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDG62_14085 082567dc9d81f36125391092781451a4 538 Gene3D G3DSA:2.40.30.10 241 328 2.1E-27 T 23-10-2018 CDG62_14085 082567dc9d81f36125391092781451a4 538 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site CDG62_14085 082567dc9d81f36125391092781451a4 538 PRINTS PR00315 GTP-binding elongation factor signature 26 39 1.3E-13 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_14085 082567dc9d81f36125391092781451a4 538 PRINTS PR00315 GTP-binding elongation factor signature 107 117 1.3E-13 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_14085 082567dc9d81f36125391092781451a4 538 PRINTS PR00315 GTP-binding elongation factor signature 123 134 1.3E-13 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_14085 082567dc9d81f36125391092781451a4 538 PRINTS PR00315 GTP-binding elongation factor signature 160 169 1.3E-13 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_14085 082567dc9d81f36125391092781451a4 538 PRINTS PR00315 GTP-binding elongation factor signature 87 95 1.3E-13 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_14085 082567dc9d81f36125391092781451a4 538 SUPERFAMILY SSF50447 241 327 1.23E-22 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG62_14085 082567dc9d81f36125391092781451a4 538 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 471 51.911 T 23-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDG62_14085 082567dc9d81f36125391092781451a4 538 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 434 1.8E-193 T 23-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CDG62_07265 3b22984c175eef2e96d0d16107cf9f9e 184 SUPERFAMILY SSF55620 2 181 1.56E-72 T 23-10-2018 CDG62_07265 3b22984c175eef2e96d0d16107cf9f9e 184 Pfam PF01227 GTP cyclohydrolase I 4 180 1.8E-71 T 23-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDG62_07265 3b22984c175eef2e96d0d16107cf9f9e 184 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 108 118 - T 23-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDG62_07265 3b22984c175eef2e96d0d16107cf9f9e 184 Gene3D G3DSA:3.30.1130.10 51 183 5.6E-58 T 23-10-2018 CDG62_07265 3b22984c175eef2e96d0d16107cf9f9e 184 Gene3D G3DSA:1.10.286.10 1 48 3.0E-17 T 23-10-2018 CDG62_07265 3b22984c175eef2e96d0d16107cf9f9e 184 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 3 180 1.7E-69 T 23-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDG62_07265 3b22984c175eef2e96d0d16107cf9f9e 184 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 60 76 - T 23-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDG62_07265 3b22984c175eef2e96d0d16107cf9f9e 184 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 181 34.379 T 23-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CDG62_06315 f859c29731f80638d53d600c915fec39 671 SUPERFAMILY SSF55486 35 663 1.24E-138 T 23-10-2018 CDG62_06315 f859c29731f80638d53d600c915fec39 671 Gene3D G3DSA:1.10.1370.40 53 662 2.2E-169 T 23-10-2018 CDG62_06315 f859c29731f80638d53d600c915fec39 671 Gene3D G3DSA:1.10.1370.10 154 600 2.2E-169 T 23-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CDG62_06315 f859c29731f80638d53d600c915fec39 671 Pfam PF01432 Peptidase family M3 230 664 1.6E-104 T 23-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CDG62_10575 12d7d55578c56e37289ff00f85e14916 507 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 420 440 - T 23-10-2018 IPR018212 Sodium/solute symporter, conserved site CDG62_10575 12d7d55578c56e37289ff00f85e14916 507 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 493 7.4E-216 T 23-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CDG62_10575 12d7d55578c56e37289ff00f85e14916 507 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 438 1.8E-118 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDG62_10575 12d7d55578c56e37289ff00f85e14916 507 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 23-10-2018 IPR018212 Sodium/solute symporter, conserved site CDG62_10575 12d7d55578c56e37289ff00f85e14916 507 Gene3D G3DSA:1.20.1730.10 23 504 1.3E-92 T 23-10-2018 IPR038377 Sodium/glucose symporter superfamily CDG62_10575 12d7d55578c56e37289ff00f85e14916 507 Pfam PF00474 Sodium:solute symporter family 35 438 1.4E-125 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDG62_17730 90c9fa28ba66ec53f9b56986202548df 107 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 11 106 24.715 T 23-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 CDG62_17730 90c9fa28ba66ec53f9b56986202548df 107 Gene3D G3DSA:2.60.120.10 1 107 7.3E-46 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG62_17730 90c9fa28ba66ec53f9b56986202548df 107 Pfam PF06865 Protein of unknown function (DUF1255) 12 104 3.0E-32 T 23-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 CDG62_17730 90c9fa28ba66ec53f9b56986202548df 107 SUPERFAMILY SSF51182 12 104 5.55E-30 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG62_05365 9ccc38d50fc033a47d46b24c1758755e 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 101 8.8E-25 T 23-10-2018 IPR003849 Preprotein translocase YajC CDG62_05365 9ccc38d50fc033a47d46b24c1758755e 109 Pfam PF02699 Preprotein translocase subunit 24 97 7.3E-25 T 23-10-2018 IPR003849 Preprotein translocase YajC CDG62_05365 9ccc38d50fc033a47d46b24c1758755e 109 SMART SM01323 19 101 4.7E-35 T 23-10-2018 IPR003849 Preprotein translocase YajC CDG62_05365 9ccc38d50fc033a47d46b24c1758755e 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 4.4E-12 T 23-10-2018 IPR003849 Preprotein translocase YajC CDG62_05365 9ccc38d50fc033a47d46b24c1758755e 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 41 59 4.4E-12 T 23-10-2018 IPR003849 Preprotein translocase YajC CDG62_04320 5f01d6a671628797fa70f6cd80410c9a 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 3.8E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_04320 5f01d6a671628797fa70f6cd80410c9a 157 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 6.2E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_04320 5f01d6a671628797fa70f6cd80410c9a 157 Gene3D G3DSA:3.30.700.10 10 149 8.3E-24 T 23-10-2018 CDG62_04320 5f01d6a671628797fa70f6cd80410c9a 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_04320 5f01d6a671628797fa70f6cd80410c9a 157 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 1.3E-10 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG62_04320 5f01d6a671628797fa70f6cd80410c9a 157 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 1.3E-10 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG62_04320 5f01d6a671628797fa70f6cd80410c9a 157 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 31 104 4.1E-8 T 23-10-2018 IPR031982 Type IV minor pilin ComP CDG62_04320 5f01d6a671628797fa70f6cd80410c9a 157 SUPERFAMILY SSF54523 10 138 1.15E-20 T 23-10-2018 CDG62_14350 7a58589b14975884930e97d8a29ac706 413 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 3 410 1.1E-148 T 23-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CDG62_14350 7a58589b14975884930e97d8a29ac706 413 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 3 412 24.583 T 23-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CDG62_14350 7a58589b14975884930e97d8a29ac706 413 Pfam PF03616 Sodium/glutamate symporter 4 381 5.7E-137 T 23-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CDG62_11745 1e3b13dde0713e0a843019a42297f42a 390 Gene3D G3DSA:3.40.50.2000 201 369 4.5E-6 T 23-10-2018 CDG62_11745 1e3b13dde0713e0a843019a42297f42a 390 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 390 36.488 T 23-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CDG62_11745 1e3b13dde0713e0a843019a42297f42a 390 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 387 4.2E-102 T 23-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CDG62_11745 1e3b13dde0713e0a843019a42297f42a 390 Pfam PF02684 Lipid-A-disaccharide synthetase 8 373 1.5E-104 T 23-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 CDG62_11745 1e3b13dde0713e0a843019a42297f42a 390 SUPERFAMILY SSF53756 7 369 1.7E-28 T 23-10-2018 CDG62_07745 afc77da3ac93b35fabf46a1312c11ef8 207 SUPERFAMILY SSF161111 17 199 5.89E-33 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG62_07745 afc77da3ac93b35fabf46a1312c11ef8 207 Pfam PF01545 Cation efflux family 23 199 8.9E-12 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG62_07745 afc77da3ac93b35fabf46a1312c11ef8 207 Gene3D G3DSA:1.20.1510.10 19 200 2.9E-7 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG62_07870 9ebdcf390e35146c5271350e33063419 369 Gene3D G3DSA:3.40.190.10 181 266 2.8E-58 T 23-10-2018 CDG62_07870 9ebdcf390e35146c5271350e33063419 369 TIGRFAM TIGR01807 CM_P2: chorismate mutase 14 89 3.4E-26 T 23-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 CDG62_07870 9ebdcf390e35146c5271350e33063419 369 Gene3D G3DSA:1.20.59.10 14 100 5.1E-30 T 23-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDG62_07870 9ebdcf390e35146c5271350e33063419 369 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 252 274 - T 23-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CDG62_07870 9ebdcf390e35146c5271350e33063419 369 PIRSF PIRSF001500 7 369 3.9E-134 T 23-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CDG62_07870 9ebdcf390e35146c5271350e33063419 369 Pfam PF00800 Prephenate dehydratase 101 277 1.1E-61 T 23-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CDG62_07870 9ebdcf390e35146c5271350e33063419 369 SMART SM00830 18 99 2.2E-28 T 23-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDG62_07870 9ebdcf390e35146c5271350e33063419 369 SUPERFAMILY SSF53850 101 285 6.52E-60 T 23-10-2018 CDG62_07870 9ebdcf390e35146c5271350e33063419 369 SUPERFAMILY SSF48600 9 97 2.9E-20 T 23-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDG62_07870 9ebdcf390e35146c5271350e33063419 369 Gene3D G3DSA:3.40.190.10 103 274 2.8E-58 T 23-10-2018 CDG62_07870 9ebdcf390e35146c5271350e33063419 369 Pfam PF01842 ACT domain 287 351 2.3E-11 T 23-10-2018 IPR002912 ACT domain CDG62_07870 9ebdcf390e35146c5271350e33063419 369 Gene3D G3DSA:3.30.70.260 279 368 1.4E-28 T 23-10-2018 CDG62_07870 9ebdcf390e35146c5271350e33063419 369 Pfam PF01817 Chorismate mutase type II 18 96 6.6E-22 T 23-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CDG62_07870 9ebdcf390e35146c5271350e33063419 369 SUPERFAMILY SSF55021 271 365 9.16E-27 T 23-10-2018 CDG62_10480 edd8d1d7f01fed37cfbc3f27a5e60c05 345 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 8.5E-90 T 23-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDG62_10480 edd8d1d7f01fed37cfbc3f27a5e60c05 345 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 1.3E-92 T 23-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDG62_10480 edd8d1d7f01fed37cfbc3f27a5e60c05 345 Gene3D G3DSA:3.20.20.70 1 345 2.5E-152 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_10480 edd8d1d7f01fed37cfbc3f27a5e60c05 345 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 23-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDG62_10480 edd8d1d7f01fed37cfbc3f27a5e60c05 345 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 344 1.3E-193 T 23-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CDG62_10480 edd8d1d7f01fed37cfbc3f27a5e60c05 345 PIRSF PIRSF001359 1 329 1.3E-79 T 23-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CDG62_10480 edd8d1d7f01fed37cfbc3f27a5e60c05 345 SUPERFAMILY SSF51569 3 328 1.32E-103 T 23-10-2018 CDG62_12895 936df7dcb48774799b86999989bd7f41 270 Pfam PF01063 Amino-transferase class IV 25 241 2.4E-38 T 23-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 CDG62_12895 936df7dcb48774799b86999989bd7f41 270 Gene3D G3DSA:3.30.470.10 3 107 5.1E-19 T 23-10-2018 CDG62_12895 936df7dcb48774799b86999989bd7f41 270 SUPERFAMILY SSF56752 3 265 3.53E-50 T 23-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 CDG62_12895 936df7dcb48774799b86999989bd7f41 270 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 6 261 3.6E-63 T 23-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 CDG62_12895 936df7dcb48774799b86999989bd7f41 270 Gene3D G3DSA:3.20.10.10 125 262 1.7E-33 T 23-10-2018 CDG62_13085 012ad87509db331dd81d390675090c06 324 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 324 43.997 T 23-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG62_13085 012ad87509db331dd81d390675090c06 324 Gene3D G3DSA:3.40.190.80 188 324 9.3E-50 T 23-10-2018 CDG62_13085 012ad87509db331dd81d390675090c06 324 PIRSF PIRSF000904 2 324 1.2E-116 T 23-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG62_13085 012ad87509db331dd81d390675090c06 324 SUPERFAMILY SSF56655 13 323 4.09E-107 T 23-10-2018 CDG62_13085 012ad87509db331dd81d390675090c06 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 140 163 2.3E-62 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG62_13085 012ad87509db331dd81d390675090c06 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 26 53 2.3E-62 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG62_13085 012ad87509db331dd81d390675090c06 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 63 89 2.3E-62 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG62_13085 012ad87509db331dd81d390675090c06 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 171 194 2.3E-62 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG62_13085 012ad87509db331dd81d390675090c06 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 299 324 2.3E-62 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG62_13085 012ad87509db331dd81d390675090c06 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 197 224 2.3E-62 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG62_13085 012ad87509db331dd81d390675090c06 324 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 14 186 1.4E-58 T 23-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG62_13085 012ad87509db331dd81d390675090c06 324 Gene3D G3DSA:3.30.540.10 2 187 2.1E-63 T 23-10-2018 CDG62_13085 012ad87509db331dd81d390675090c06 324 PIRSF PIRSF500210 1 324 4.8E-119 T 23-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CDG62_16590 4ea5848cd88f64e1e701b47dcdf4b156 70 SUPERFAMILY SSF46785 3 49 2.18E-7 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_16590 4ea5848cd88f64e1e701b47dcdf4b156 70 Gene3D G3DSA:1.10.10.10 1 54 2.9E-10 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_16590 4ea5848cd88f64e1e701b47dcdf4b156 70 Pfam PF09397 Ftsk gamma domain 2 48 9.1E-11 T 23-10-2018 IPR018541 FtsK gamma domain CDG62_16590 4ea5848cd88f64e1e701b47dcdf4b156 70 SMART SM00843 2 51 0.0049 T 23-10-2018 IPR018541 FtsK gamma domain CDG62_06505 a7b457bd4f4eab9d6cdec8c1c16a27f3 537 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 10 511 1.4E-157 T 23-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06505 a7b457bd4f4eab9d6cdec8c1c16a27f3 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 260 284 1.3E-33 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06505 a7b457bd4f4eab9d6cdec8c1c16a27f3 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 400 426 1.3E-33 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06505 a7b457bd4f4eab9d6cdec8c1c16a27f3 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 348 367 1.3E-33 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06505 a7b457bd4f4eab9d6cdec8c1c16a27f3 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 180 204 1.3E-33 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06505 a7b457bd4f4eab9d6cdec8c1c16a27f3 537 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 145 164 1.3E-33 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06505 a7b457bd4f4eab9d6cdec8c1c16a27f3 537 Pfam PF00361 Proton-conducting membrane transporter 140 441 2.7E-68 T 23-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_10290 276df5e4137490f473990455b716ef02 508 SUPERFAMILY SSF56176 421 505 1.96E-12 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG62_10290 276df5e4137490f473990455b716ef02 508 Gene3D G3DSA:3.30.465.10 428 507 1.2E-10 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG62_10290 276df5e4137490f473990455b716ef02 508 Pfam PF03471 Transporter associated domain 427 505 2.6E-13 T 23-10-2018 IPR005170 Transporter-associated domain CDG62_10290 276df5e4137490f473990455b716ef02 508 SUPERFAMILY SSF54631 282 416 1.89E-19 T 23-10-2018 CDG62_10290 276df5e4137490f473990455b716ef02 508 Pfam PF03741 Integral membrane protein TerC family 14 204 7.3E-48 T 23-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CDG62_10290 276df5e4137490f473990455b716ef02 508 Gene3D G3DSA:3.10.580.10 275 427 3.2E-38 T 23-10-2018 CDG62_10290 276df5e4137490f473990455b716ef02 508 SMART SM01091 426 507 8.1E-16 T 23-10-2018 IPR005170 Transporter-associated domain CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 Pfam PF00390 Malic enzyme, N-terminal domain 82 262 1.2E-77 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 SUPERFAMILY SSF51735 272 563 4.36E-94 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 Gene3D G3DSA:3.40.50.720 270 566 1.4E-107 T 23-10-2018 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 PRINTS PR00072 Malic enzyme signature 268 284 2.0E-74 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 PRINTS PR00072 Malic enzyme signature 409 425 2.0E-74 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 PRINTS PR00072 Malic enzyme signature 243 261 2.0E-74 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 PRINTS PR00072 Malic enzyme signature 148 177 2.0E-74 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 PRINTS PR00072 Malic enzyme signature 88 112 2.0E-74 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 PRINTS PR00072 Malic enzyme signature 184 206 2.0E-74 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 PRINTS PR00072 Malic enzyme signature 299 315 2.0E-74 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 ProSitePatterns PS00331 Malic enzymes signature. 268 284 - T 23-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 SUPERFAMILY SSF53223 6 271 1.01E-108 T 23-10-2018 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 Pfam PF03949 Malic enzyme, NAD binding domain 272 531 2.7E-100 T 23-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 PIRSF PIRSF000106 2 564 3.2E-228 T 23-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 SMART SM00919 272 532 8.1E-129 T 23-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 SMART SM01274 82 262 6.9E-105 T 23-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 Gene3D G3DSA:3.40.50.10380 17 269 1.8E-112 T 23-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 CDG62_18590 70b226ae51d2b0c0045b5e3aaa4d9c59 566 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 5 566 70.275 T 23-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 Pfam PF00117 Glutamine amidotransferase class-I 4 190 1.1E-52 T 23-10-2018 IPR017926 Glutamine amidotransferase CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 2.1E-82 T 23-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.0E-34 T 23-10-2018 CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.0E-34 T 23-10-2018 CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.0E-34 T 23-10-2018 CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.0E-34 T 23-10-2018 CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.0E-34 T 23-10-2018 CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 PRINTS PR00097 Anthranilate synthase component II signature 169 182 1.0E-34 T 23-10-2018 CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 Gene3D G3DSA:3.40.50.880 1 193 2.1E-60 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 5.4E-13 T 23-10-2018 CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 5.4E-13 T 23-10-2018 CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 5.4E-13 T 23-10-2018 CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 8.2E-5 T 23-10-2018 CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 8.2E-5 T 23-10-2018 CDG62_07310 2b578b0f9ad0df86e24512bfd4b6aa15 194 SUPERFAMILY SSF52317 1 192 1.78E-53 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 PRINTS PR00415 Aconitase family signature 162 170 4.9E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 PRINTS PR00415 Aconitase family signature 281 294 4.9E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 PRINTS PR00415 Aconitase family signature 403 414 4.9E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 PRINTS PR00415 Aconitase family signature 205 220 4.9E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 PRINTS PR00415 Aconitase family signature 267 280 4.9E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 PRINTS PR00415 Aconitase family signature 191 204 4.9E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 PRINTS PR00415 Aconitase family signature 360 374 4.9E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 PRINTS PR00415 Aconitase family signature 465 478 4.9E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 PRINTS PR00415 Aconitase family signature 138 151 4.9E-27 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 Pfam PF00330 Aconitase family (aconitate hydratase) 69 534 8.1E-145 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 Pfam PF00694 Aconitase C-terminal domain 657 789 3.4E-31 T 23-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 Gene3D G3DSA:1.10.1440.20 563 618 1.8E-7 T 23-10-2018 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 SUPERFAMILY SSF52016 599 862 5.49E-68 T 23-10-2018 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 Gene3D G3DSA:3.30.499.20 4 360 2.9E-129 T 23-10-2018 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 864 0.0 T 23-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 Gene3D G3DSA:3.30.499.10 361 562 5.9E-77 T 23-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 Gene3D G3DSA:3.20.19.10 619 863 6.6E-84 T 23-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CDG62_06050 0fc0092c493c49f7ba7d33f43bf570fb 868 SUPERFAMILY SSF53732 16 588 4.97E-185 T 23-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CDG62_10215 1a5ba9a1320003146fc169bae528726c 143 Gene3D G3DSA:3.30.530.20 1 143 4.9E-16 T 23-10-2018 IPR023393 START-like domain superfamily CDG62_10215 1a5ba9a1320003146fc169bae528726c 143 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 4 142 3.1E-11 T 23-10-2018 IPR019587 Polyketide cyclase/dehydrase CDG62_10215 1a5ba9a1320003146fc169bae528726c 143 SUPERFAMILY SSF55961 1 140 3.27E-17 T 23-10-2018 CDG62_17910 7317672b36c1c8f9f230596b5274439c 161 Pfam PF14539 Domain of unknown function (DUF4442) 12 151 3.0E-16 T 23-10-2018 IPR027961 Protein of unknown function DUF4442 CDG62_17910 7317672b36c1c8f9f230596b5274439c 161 Gene3D G3DSA:3.10.129.10 8 158 5.8E-29 T 23-10-2018 CDG62_17910 7317672b36c1c8f9f230596b5274439c 161 SUPERFAMILY SSF54637 11 158 1.14E-19 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_11115 4ab3b8cdb775ee6653631ec15f0ee065 139 SUPERFAMILY SSF46955 1 112 8.42E-28 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily CDG62_11115 4ab3b8cdb775ee6653631ec15f0ee065 139 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_11115 4ab3b8cdb775ee6653631ec15f0ee065 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.9E-9 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_11115 4ab3b8cdb775ee6653631ec15f0ee065 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.9E-9 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_11115 4ab3b8cdb775ee6653631ec15f0ee065 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.9E-9 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_11115 4ab3b8cdb775ee6653631ec15f0ee065 139 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.7E-19 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_11115 4ab3b8cdb775ee6653631ec15f0ee065 139 SMART SM00422 1 70 1.3E-27 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_11115 4ab3b8cdb775ee6653631ec15f0ee065 139 Gene3D G3DSA:1.10.1660.10 1 120 2.1E-28 T 23-10-2018 CDG62_15755 cb218bfd36f60a5eec5e55e8c380dc5f 337 SUPERFAMILY SSF51569 6 334 1.83E-133 T 23-10-2018 CDG62_15755 cb218bfd36f60a5eec5e55e8c380dc5f 337 SMART SM01004 10 333 2.9E-222 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG62_15755 cb218bfd36f60a5eec5e55e8c380dc5f 337 Gene3D G3DSA:3.20.20.70 2 337 3.9E-140 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_15755 cb218bfd36f60a5eec5e55e8c380dc5f 337 PIRSF PIRSF001415 2 336 8.9E-139 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG62_15755 cb218bfd36f60a5eec5e55e8c380dc5f 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 23-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG62_15755 cb218bfd36f60a5eec5e55e8c380dc5f 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 1.0E-54 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG62_15755 cb218bfd36f60a5eec5e55e8c380dc5f 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 1.0E-54 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG62_15755 cb218bfd36f60a5eec5e55e8c380dc5f 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 1.0E-54 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG62_15755 cb218bfd36f60a5eec5e55e8c380dc5f 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.0E-54 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG62_15755 cb218bfd36f60a5eec5e55e8c380dc5f 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 1.0E-54 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG62_15755 cb218bfd36f60a5eec5e55e8c380dc5f 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 1.0E-54 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG62_15755 cb218bfd36f60a5eec5e55e8c380dc5f 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 330 3.5E-131 T 23-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CDG62_16265 cb7d5e722aa4dfa79ea25e27927009d4 274 SUPERFAMILY SSF56317 4 269 1.19E-64 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDG62_16265 cb7d5e722aa4dfa79ea25e27927009d4 274 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 23-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site CDG62_16265 cb7d5e722aa4dfa79ea25e27927009d4 274 Pfam PF00795 Carbon-nitrogen hydrolase 4 255 2.3E-45 T 23-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CDG62_16265 cb7d5e722aa4dfa79ea25e27927009d4 274 Gene3D G3DSA:3.60.110.10 1 274 2.8E-79 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDG62_11185 0f75b94e95a5ffa94b6cdd255032d75e 369 SMART SM00922 144 241 2.4E-19 T 23-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CDG62_11185 0f75b94e95a5ffa94b6cdd255032d75e 369 Pfam PF13378 Enolase C-terminal domain-like 151 361 1.0E-44 T 23-10-2018 IPR029065 Enolase C-terminal domain-like CDG62_11185 0f75b94e95a5ffa94b6cdd255032d75e 369 Gene3D G3DSA:3.30.390.10 9 360 8.8E-117 T 23-10-2018 IPR029017 Enolase-like, N-terminal CDG62_11185 0f75b94e95a5ffa94b6cdd255032d75e 369 Gene3D G3DSA:3.20.20.120 118 353 8.8E-117 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CDG62_11185 0f75b94e95a5ffa94b6cdd255032d75e 369 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 2 368 9.0E-176 T 23-10-2018 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 CDG62_11185 0f75b94e95a5ffa94b6cdd255032d75e 369 SUPERFAMILY SSF54826 3 126 6.48E-31 T 23-10-2018 CDG62_11185 0f75b94e95a5ffa94b6cdd255032d75e 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 6 125 1.3E-30 T 23-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CDG62_11185 0f75b94e95a5ffa94b6cdd255032d75e 369 SUPERFAMILY SSF51604 127 367 7.86E-64 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CDG62_11185 0f75b94e95a5ffa94b6cdd255032d75e 369 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 191 222 - T 23-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CDG62_18490 20b8a219e5bdd667771ef52b1023041f 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 23-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18490 20b8a219e5bdd667771ef52b1023041f 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 3.2E-104 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18490 20b8a219e5bdd667771ef52b1023041f 289 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 4.2E-33 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18490 20b8a219e5bdd667771ef52b1023041f 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 4.2E-33 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18490 20b8a219e5bdd667771ef52b1023041f 289 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 4.2E-33 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18490 20b8a219e5bdd667771ef52b1023041f 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 4.2E-33 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18490 20b8a219e5bdd667771ef52b1023041f 289 Gene3D G3DSA:1.10.287.80 6 285 1.7E-101 T 23-10-2018 CDG62_18490 20b8a219e5bdd667771ef52b1023041f 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 35.899 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18490 20b8a219e5bdd667771ef52b1023041f 289 SUPERFAMILY SSF52943 2 289 7.06E-92 T 23-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18490 20b8a219e5bdd667771ef52b1023041f 289 Pfam PF00231 ATP synthase 3 288 5.4E-93 T 23-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18490 20b8a219e5bdd667771ef52b1023041f 289 Gene3D G3DSA:3.40.1380.10 61 208 1.7E-101 T 23-10-2018 CDG62_03020 7bcdff1e0f4afb925bde7c9b7625b801 492 Pfam PF00209 Sodium:neurotransmitter symporter family 5 119 2.1E-38 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CDG62_03020 7bcdff1e0f4afb925bde7c9b7625b801 492 Pfam PF00209 Sodium:neurotransmitter symporter family 123 477 2.4E-66 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CDG62_03020 7bcdff1e0f4afb925bde7c9b7625b801 492 SUPERFAMILY SSF161070 5 484 1.57E-134 T 23-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 CDG62_03020 7bcdff1e0f4afb925bde7c9b7625b801 492 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 29 43 - T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CDG62_03020 7bcdff1e0f4afb925bde7c9b7625b801 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 2.2E-24 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CDG62_03020 7bcdff1e0f4afb925bde7c9b7625b801 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 86 112 2.2E-24 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CDG62_03020 7bcdff1e0f4afb925bde7c9b7625b801 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 313 332 2.2E-24 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CDG62_03020 7bcdff1e0f4afb925bde7c9b7625b801 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 2.2E-24 T 23-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CDG62_05510 f8eb8b5d1f246883f04ea5a1fea1899a 691 SUPERFAMILY SSF56935 38 691 4.27E-82 T 23-10-2018 CDG62_05510 f8eb8b5d1f246883f04ea5a1fea1899a 691 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 674 691 - T 23-10-2018 IPR010917 TonB-dependent receptor, conserved site CDG62_05510 f8eb8b5d1f246883f04ea5a1fea1899a 691 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 147 9.1E-10 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_05510 f8eb8b5d1f246883f04ea5a1fea1899a 691 Pfam PF00593 TonB dependent receptor 309 690 3.3E-35 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_05510 f8eb8b5d1f246883f04ea5a1fea1899a 691 Gene3D G3DSA:2.170.130.10 39 158 1.9E-23 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.8E-49 T 23-10-2018 IPR017861 Kae1/TsaD family CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.8E-49 T 23-10-2018 IPR017861 Kae1/TsaD family CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 261 270 1.8E-49 T 23-10-2018 IPR017861 Kae1/TsaD family CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.8E-49 T 23-10-2018 IPR017861 Kae1/TsaD family CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.8E-49 T 23-10-2018 IPR017861 Kae1/TsaD family CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.8E-49 T 23-10-2018 IPR017861 Kae1/TsaD family CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 Gene3D G3DSA:3.30.420.40 129 291 4.6E-127 T 23-10-2018 CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 Pfam PF00814 Glycoprotease family 25 305 9.5E-103 T 23-10-2018 IPR000905 Gcp-like domain CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 SUPERFAMILY SSF53067 3 121 2.46E-30 T 23-10-2018 CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 329 63.567 T 23-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 23-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 312 3.0E-133 T 23-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 304 2.1E-118 T 23-10-2018 IPR017861 Kae1/TsaD family CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 SUPERFAMILY SSF53067 101 307 1.04E-43 T 23-10-2018 CDG62_08305 3756696c8abdef35915daaee2a6d7eea 338 Gene3D G3DSA:3.30.420.40 3 313 4.6E-127 T 23-10-2018 CDG62_16485 00acfe978d54c72c8a53ad3a169643d0 462 Pfam PF01938 TRAM domain 19 66 2.4E-5 T 23-10-2018 IPR002792 TRAM domain CDG62_16485 00acfe978d54c72c8a53ad3a169643d0 462 SUPERFAMILY SSF50249 4 75 8.0E-9 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_16485 00acfe978d54c72c8a53ad3a169643d0 462 SUPERFAMILY SSF53335 85 456 1.59E-79 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_16485 00acfe978d54c72c8a53ad3a169643d0 462 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 108 456 4.4E-26 T 23-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CDG62_16485 00acfe978d54c72c8a53ad3a169643d0 462 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 388 418 - T 23-10-2018 IPR030390 RNA methyltransferase TrmA, active site CDG62_16485 00acfe978d54c72c8a53ad3a169643d0 462 Gene3D G3DSA:3.40.50.150 97 451 3.5E-104 T 23-10-2018 CDG62_16485 00acfe978d54c72c8a53ad3a169643d0 462 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 16 457 65.99 T 23-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CDG62_16485 00acfe978d54c72c8a53ad3a169643d0 462 Gene3D G3DSA:2.40.50.140 2 96 8.7E-19 T 23-10-2018 CDG62_16485 00acfe978d54c72c8a53ad3a169643d0 462 Gene3D G3DSA:3.40.1350.30 144 286 3.5E-104 T 23-10-2018 CDG62_16485 00acfe978d54c72c8a53ad3a169643d0 462 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 41 449 2.8E-93 T 23-10-2018 CDG62_00290 004775b256312261d3a8d5daab805d39 263 Gene3D G3DSA:1.10.260.40 50 116 2.6E-13 T 23-10-2018 CDG62_00290 004775b256312261d3a8d5daab805d39 263 Gene3D G3DSA:2.10.109.10 166 263 4.5E-5 T 23-10-2018 CDG62_00290 004775b256312261d3a8d5daab805d39 263 SUPERFAMILY SSF47413 53 107 5.63E-9 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG62_00290 004775b256312261d3a8d5daab805d39 263 Pfam PF01381 Helix-turn-helix 56 106 1.4E-7 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_00290 004775b256312261d3a8d5daab805d39 263 SMART SM00530 52 106 9.1E-8 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_00290 004775b256312261d3a8d5daab805d39 263 SUPERFAMILY SSF51306 180 260 6.63E-9 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CDG62_10410 cf8d0f4857878d4acd1fbb9ad8a5df14 147 Pfam PF13279 Thioesterase-like superfamily 20 136 1.8E-14 T 23-10-2018 CDG62_10410 cf8d0f4857878d4acd1fbb9ad8a5df14 147 SUPERFAMILY SSF54637 9 142 9.46E-38 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_10410 cf8d0f4857878d4acd1fbb9ad8a5df14 147 Gene3D G3DSA:3.10.129.10 1 143 1.8E-47 T 23-10-2018 CDG62_15390 8991d16f0725ac40a86ff7e40c8d9566 102 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 100 4.0E-51 T 23-10-2018 IPR009662 Malonate decarboxylase delta subunit CDG62_15390 8991d16f0725ac40a86ff7e40c8d9566 102 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 97 4.9E-36 T 23-10-2018 IPR009662 Malonate decarboxylase delta subunit CDG62_15390 8991d16f0725ac40a86ff7e40c8d9566 102 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 102 41.059 T 23-10-2018 IPR009662 Malonate decarboxylase delta subunit CDG62_15390 8991d16f0725ac40a86ff7e40c8d9566 102 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 18 97 1.5E-23 T 23-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PIRSF PIRSF000238 1 521 1.5E-246 T 23-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 Gene3D G3DSA:3.40.30.80 1 199 3.3E-58 T 23-10-2018 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 23-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 SUPERFAMILY SSF51905 204 514 5.69E-49 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 SUPERFAMILY SSF52833 103 195 1.12E-18 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 Pfam PF13192 Thioredoxin domain 120 194 1.7E-8 T 23-10-2018 IPR012336 Thioredoxin-like fold CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 Gene3D G3DSA:3.50.50.60 327 450 1.5E-106 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 SUPERFAMILY SSF52833 1 100 1.68E-25 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 479 497 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 1.6E-225 T 23-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 3.6E-37 T 23-10-2018 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 3.6E-37 T 23-10-2018 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 491 3.6E-37 T 23-10-2018 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 3.6E-37 T 23-10-2018 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 3.6E-37 T 23-10-2018 CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 Gene3D G3DSA:3.50.50.60 212 509 1.5E-106 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_11995 b2f130a5aee891b965323956b9da5cf2 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 504 2.2E-44 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_16175 28ca2163a714ade59da1da48f5e2fc50 233 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 160 181 - T 23-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 CDG62_16175 28ca2163a714ade59da1da48f5e2fc50 233 SUPERFAMILY SSF53850 19 224 3.47E-64 T 23-10-2018 CDG62_16175 28ca2163a714ade59da1da48f5e2fc50 233 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 20 225 54.797 T 23-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 CDG62_16175 28ca2163a714ade59da1da48f5e2fc50 233 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 21 201 8.5E-57 T 23-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CDG62_16175 28ca2163a714ade59da1da48f5e2fc50 233 Gene3D G3DSA:3.40.190.10 112 193 1.3E-69 T 23-10-2018 CDG62_16175 28ca2163a714ade59da1da48f5e2fc50 233 Gene3D G3DSA:3.40.190.10 22 213 1.3E-69 T 23-10-2018 CDG62_16175 28ca2163a714ade59da1da48f5e2fc50 233 Pfam PF01634 ATP phosphoribosyltransferase 70 221 1.4E-48 T 23-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CDG62_08780 42fec774e6ed335dc71a0d70ef6140ad 273 Gene3D G3DSA:1.10.3720.10 70 262 4.0E-25 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_08780 42fec774e6ed335dc71a0d70ef6140ad 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 262 1.0E-23 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_08780 42fec774e6ed335dc71a0d70ef6140ad 273 SUPERFAMILY SSF161098 72 252 3.66E-31 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 SUPERFAMILY SSF52029 184 376 1.24E-82 T 23-10-2018 IPR027409 GroEL-like apical domain superfamily CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 4 527 3.6E-254 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 Gene3D G3DSA:3.50.7.10 173 379 8.9E-236 T 23-10-2018 IPR027409 GroEL-like apical domain superfamily CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.5E-96 T 23-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 SUPERFAMILY SSF48592 7 521 5.42E-77 T 23-10-2018 IPR027413 GroEL-like equatorial domain superfamily CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.32 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 Gene3D G3DSA:1.10.560.10 8 521 8.9E-236 T 23-10-2018 IPR027413 GroEL-like equatorial domain superfamily CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 SUPERFAMILY SSF54849 139 203 2.52E-24 T 23-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDG62_00875 7832f7f5ea4b033b84ff961c30126415 546 Gene3D G3DSA:3.30.260.10 138 410 8.9E-236 T 23-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 SUPERFAMILY SSF52029 184 376 1.24E-82 T 23-10-2018 IPR027409 GroEL-like apical domain superfamily CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 4 527 3.6E-254 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 Gene3D G3DSA:3.50.7.10 173 379 8.9E-236 T 23-10-2018 IPR027409 GroEL-like apical domain superfamily CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.5E-96 T 23-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 SUPERFAMILY SSF48592 7 521 5.42E-77 T 23-10-2018 IPR027413 GroEL-like equatorial domain superfamily CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.32 T 23-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 Gene3D G3DSA:1.10.560.10 8 521 8.9E-236 T 23-10-2018 IPR027413 GroEL-like equatorial domain superfamily CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 SUPERFAMILY SSF54849 139 203 2.52E-24 T 23-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDG62_12420 7832f7f5ea4b033b84ff961c30126415 546 Gene3D G3DSA:3.30.260.10 138 410 8.9E-236 T 23-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CDG62_03750 4d6b395d46707e458fa480e462426cc1 444 SUPERFAMILY SSF109604 27 436 9.42E-72 T 23-10-2018 CDG62_03750 4d6b395d46707e458fa480e462426cc1 444 Pfam PF01966 HD domain 64 141 1.6E-7 T 23-10-2018 IPR006674 HD domain CDG62_03750 4d6b395d46707e458fa480e462426cc1 444 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 28 434 3.5E-106 T 23-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 CDG62_03750 4d6b395d46707e458fa480e462426cc1 444 Pfam PF13286 Phosphohydrolase-associated domain 346 431 6.8E-24 T 23-10-2018 IPR026875 Phosphohydrolase-associated domain CDG62_03750 4d6b395d46707e458fa480e462426cc1 444 Gene3D G3DSA:1.10.3210.10 2 434 1.3E-98 T 23-10-2018 CDG62_03750 4d6b395d46707e458fa480e462426cc1 444 SMART SM00471 60 266 9.9E-9 T 23-10-2018 IPR003607 HD/PDEase domain CDG62_03750 4d6b395d46707e458fa480e462426cc1 444 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 6 433 31.385 T 23-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 CDG62_16995 ebf7556faa7987cfaba8593b32505022 482 Gene3D G3DSA:3.40.605.10 37 452 4.4E-151 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG62_16995 ebf7556faa7987cfaba8593b32505022 482 Gene3D G3DSA:3.40.309.10 230 432 4.4E-151 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG62_16995 ebf7556faa7987cfaba8593b32505022 482 PIRSF PIRSF036492 1 482 5.2E-159 T 23-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 CDG62_16995 ebf7556faa7987cfaba8593b32505022 482 Pfam PF00171 Aldehyde dehydrogenase family 4 447 1.6E-90 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG62_16995 ebf7556faa7987cfaba8593b32505022 482 SUPERFAMILY SSF53720 8 454 2.23E-116 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG62_16995 ebf7556faa7987cfaba8593b32505022 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 254 265 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDG62_16995 ebf7556faa7987cfaba8593b32505022 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 226 233 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDG62_17780 abaac3230139826fb0e70f670b3b8e75 195 Gene3D G3DSA:1.20.120.1760 5 188 6.2E-14 T 23-10-2018 CDG62_17780 abaac3230139826fb0e70f670b3b8e75 195 PIRSF PIRSF000847 4 195 1.6E-46 T 23-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CDG62_17780 abaac3230139826fb0e70f670b3b8e75 195 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 85 1.3E-17 T 23-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CDG62_17780 abaac3230139826fb0e70f670b3b8e75 195 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 63 85 - T 23-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CDG62_17780 abaac3230139826fb0e70f670b3b8e75 195 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 8 193 2.0E-52 T 23-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CDG62_04735 134c4f32acb172ee036152a8ae3a75eb 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.441 T 23-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04735 134c4f32acb172ee036152a8ae3a75eb 65 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 23-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04735 134c4f32acb172ee036152a8ae3a75eb 65 SUPERFAMILY SSF46561 1 63 9.16E-19 T 23-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04735 134c4f32acb172ee036152a8ae3a75eb 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 8.3E-18 T 23-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04735 134c4f32acb172ee036152a8ae3a75eb 65 Gene3D G3DSA:1.10.287.310 1 63 7.9E-22 T 23-10-2018 CDG62_04735 134c4f32acb172ee036152a8ae3a75eb 65 Pfam PF00831 Ribosomal L29 protein 4 60 5.8E-19 T 23-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_05820 63ce481794d58e262165b36dee4c67aa 322 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 321 32.64 T 23-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 CDG62_05820 63ce481794d58e262165b36dee4c67aa 322 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 320 7.8E-119 T 23-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 CDG62_05820 63ce481794d58e262165b36dee4c67aa 322 Gene3D G3DSA:3.40.718.10 2 322 2.5E-115 T 23-10-2018 CDG62_05820 63ce481794d58e262165b36dee4c67aa 322 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 29 316 2.9E-101 T 23-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 CDG62_05820 63ce481794d58e262165b36dee4c67aa 322 SUPERFAMILY SSF53659 4 321 1.86E-100 T 23-10-2018 CDG62_12590 359c9dbcaed0c3875dedf90cbb9281f4 189 Hamap MF_00141 Elongation factor P [efp]. 3 189 48.787 T 23-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CDG62_12590 359c9dbcaed0c3875dedf90cbb9281f4 189 PIRSF PIRSF005901 2 189 8.2E-63 T 23-10-2018 IPR020599 Translation elongation factor P/YeiP CDG62_12590 359c9dbcaed0c3875dedf90cbb9281f4 189 SUPERFAMILY SSF50104 2 63 1.55E-21 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily CDG62_12590 359c9dbcaed0c3875dedf90cbb9281f4 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 2.3E-26 T 23-10-2018 IPR013185 Translation elongation factor, KOW-like CDG62_12590 359c9dbcaed0c3875dedf90cbb9281f4 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 189 4.1E-76 T 23-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CDG62_12590 359c9dbcaed0c3875dedf90cbb9281f4 189 Gene3D G3DSA:2.30.30.30 1 65 2.3E-28 T 23-10-2018 IPR014722 Ribosomal protein L2, domain 2 CDG62_12590 359c9dbcaed0c3875dedf90cbb9281f4 189 SUPERFAMILY SSF50249 132 189 6.85E-17 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_12590 359c9dbcaed0c3875dedf90cbb9281f4 189 Gene3D G3DSA:2.40.50.140 132 189 9.5E-27 T 23-10-2018 CDG62_12590 359c9dbcaed0c3875dedf90cbb9281f4 189 SMART SM00841 133 188 1.2E-30 T 23-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CDG62_12590 359c9dbcaed0c3875dedf90cbb9281f4 189 SMART SM01185 69 125 1.4E-24 T 23-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CDG62_12590 359c9dbcaed0c3875dedf90cbb9281f4 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 125 6.6E-21 T 23-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CDG62_12590 359c9dbcaed0c3875dedf90cbb9281f4 189 Pfam PF09285 Elongation factor P, C-terminal 133 188 3.4E-24 T 23-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CDG62_12590 359c9dbcaed0c3875dedf90cbb9281f4 189 Gene3D G3DSA:2.40.50.140 66 131 1.9E-28 T 23-10-2018 CDG62_12590 359c9dbcaed0c3875dedf90cbb9281f4 189 SUPERFAMILY SSF50249 69 130 3.08E-14 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_17255 6956fa8b4d4846e62b9b91ff05b7f60a 312 SUPERFAMILY SSF160240 224 295 8.63E-9 T 23-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CDG62_17255 6956fa8b4d4846e62b9b91ff05b7f60a 312 Pfam PF01545 Cation efflux family 10 216 1.5E-37 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG62_17255 6956fa8b4d4846e62b9b91ff05b7f60a 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 8 299 1.4E-46 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG62_17255 6956fa8b4d4846e62b9b91ff05b7f60a 312 Gene3D G3DSA:1.20.1510.10 6 216 5.4E-38 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG62_17255 6956fa8b4d4846e62b9b91ff05b7f60a 312 Gene3D G3DSA:3.30.70.1350 219 299 2.1E-7 T 23-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CDG62_17255 6956fa8b4d4846e62b9b91ff05b7f60a 312 Pfam PF16916 Dimerisation domain of Zinc Transporter 225 294 2.3E-7 T 23-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain CDG62_17255 6956fa8b4d4846e62b9b91ff05b7f60a 312 SUPERFAMILY SSF161111 5 218 2.09E-44 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG62_16345 0590d8d54e4642b90aa3f541a6842bb6 98 Pfam PF00216 Bacterial DNA-binding protein 4 92 7.2E-30 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_16345 0590d8d54e4642b90aa3f541a6842bb6 98 SMART SM00411 4 93 1.9E-37 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_16345 0590d8d54e4642b90aa3f541a6842bb6 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 95 6.3E-44 T 23-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CDG62_16345 0590d8d54e4642b90aa3f541a6842bb6 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 23-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CDG62_16345 0590d8d54e4642b90aa3f541a6842bb6 98 Gene3D G3DSA:4.10.520.10 2 97 2.2E-34 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDG62_16345 0590d8d54e4642b90aa3f541a6842bb6 98 SUPERFAMILY SSF47729 4 94 1.25E-30 T 23-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 CDG62_16345 0590d8d54e4642b90aa3f541a6842bb6 98 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 3.1E-16 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_16345 0590d8d54e4642b90aa3f541a6842bb6 98 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 3.1E-16 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_16345 0590d8d54e4642b90aa3f541a6842bb6 98 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 3.1E-16 T 23-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CDG62_16345 0590d8d54e4642b90aa3f541a6842bb6 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 29.439 T 23-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CDG62_17785 4e06c06cc7052a62dea0da4e1d40e42e 264 SUPERFAMILY SSF54637 118 262 2.53E-21 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_17785 4e06c06cc7052a62dea0da4e1d40e42e 264 Pfam PF13622 Thioesterase-like superfamily 19 262 1.4E-42 T 23-10-2018 CDG62_17785 4e06c06cc7052a62dea0da4e1d40e42e 264 Gene3D G3DSA:3.10.129.90 5 263 1.6E-60 T 23-10-2018 CDG62_17785 4e06c06cc7052a62dea0da4e1d40e42e 264 SUPERFAMILY SSF54637 15 108 3.61E-17 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_13205 c7c911eef1fe1dd0b2afbe124aa18531 824 SUPERFAMILY SSF47203 363 511 8.54E-23 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_13205 c7c911eef1fe1dd0b2afbe124aa18531 824 Gene3D G3DSA:1.10.540.10 124 237 1.4E-92 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG62_13205 c7c911eef1fe1dd0b2afbe124aa18531 824 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 128 235 4.4E-20 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG62_13205 c7c911eef1fe1dd0b2afbe124aa18531 824 Gene3D G3DSA:1.20.140.10 363 508 1.4E-92 T 23-10-2018 CDG62_13205 c7c911eef1fe1dd0b2afbe124aa18531 824 Pfam PF09317 Domain of unknown function (DUF1974) 517 801 7.6E-94 T 23-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 CDG62_13205 c7c911eef1fe1dd0b2afbe124aa18531 824 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 363 503 3.9E-13 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG62_13205 c7c911eef1fe1dd0b2afbe124aa18531 824 SUPERFAMILY SSF56645 99 373 7.85E-44 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_13205 c7c911eef1fe1dd0b2afbe124aa18531 824 Gene3D G3DSA:2.40.110.10 238 362 1.4E-92 T 23-10-2018 CDG62_07645 5aa7add9eba5ac291159bf709d364b1f 464 SMART SM00345 10 69 1.4E-13 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_07645 5aa7add9eba5ac291159bf709d364b1f 464 Gene3D G3DSA:3.90.1150.10 111 451 2.2E-78 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_07645 5aa7add9eba5ac291159bf709d364b1f 464 Gene3D G3DSA:1.10.10.10 7 105 1.1E-15 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_07645 5aa7add9eba5ac291159bf709d364b1f 464 SUPERFAMILY SSF46785 2 72 1.09E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_07645 5aa7add9eba5ac291159bf709d364b1f 464 Gene3D G3DSA:3.40.640.10 140 357 2.2E-78 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_07645 5aa7add9eba5ac291159bf709d364b1f 464 SUPERFAMILY SSF53383 97 458 3.36E-81 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_07645 5aa7add9eba5ac291159bf709d364b1f 464 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 4.2E-13 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_07645 5aa7add9eba5ac291159bf709d364b1f 464 Pfam PF00155 Aminotransferase class I and II 133 443 8.0E-36 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG62_04845 d464ed3ca34a5bbcee42575f45c7d53a 85 Gene3D G3DSA:1.10.150.250 4 84 2.2E-21 T 23-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily CDG62_04845 d464ed3ca34a5bbcee42575f45c7d53a 85 Pfam PF03937 Flavinator of succinate dehydrogenase 10 79 4.5E-19 T 23-10-2018 IPR005631 Flavinator of succinate dehydrogenase CDG62_04845 d464ed3ca34a5bbcee42575f45c7d53a 85 SUPERFAMILY SSF109910 7 81 3.14E-19 T 23-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 452 45.329 T 23-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 SUPERFAMILY SSF51735 197 373 4.79E-53 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 Gene3D G3DSA:3.40.50.720 204 368 6.0E-68 T 23-10-2018 CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 Gene3D G3DSA:3.40.50.1480 1 148 5.1E-70 T 23-10-2018 CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 219 235 - T 23-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 Gene3D G3DSA:3.40.50.1480 149 203 6.5E-21 T 23-10-2018 CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 SMART SM00996 10 459 4.9E-277 T 23-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 147 4.4E-73 T 23-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 SUPERFAMILY SSF52283 8 460 1.02E-109 T 23-10-2018 CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 23-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 PIRSF PIRSF001109 1 460 1.2E-180 T 23-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 Gene3D G3DSA:3.40.50.1480 369 460 1.2E-30 T 23-10-2018 CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 452 1.9E-157 T 23-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 SMART SM00997 197 372 7.2E-85 T 23-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG62_13245 931330f0d6e253dc9bc67d112cbb5ba3 460 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 197 372 4.3E-58 T 23-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CDG62_05360 9c639049846f6daf00321b0cc35270e5 633 SUPERFAMILY SSF82866 428 626 6.28E-46 T 23-10-2018 CDG62_05360 9c639049846f6daf00321b0cc35270e5 633 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 618 9.7E-136 T 23-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CDG62_05360 9c639049846f6daf00321b0cc35270e5 633 Pfam PF13721 SecD export protein N-terminal TM region 2 102 7.0E-34 T 23-10-2018 IPR027398 SecD export protein N-terminal TM domain CDG62_05360 9c639049846f6daf00321b0cc35270e5 633 Gene3D G3DSA:3.30.70.3400 221 455 5.9E-48 T 23-10-2018 CDG62_05360 9c639049846f6daf00321b0cc35270e5 633 Gene3D G3DSA:3.30.1360.200 279 449 5.9E-48 T 23-10-2018 CDG62_05360 9c639049846f6daf00321b0cc35270e5 633 Pfam PF07549 SecD/SecF GG Motif 115 139 2.6E-7 T 23-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CDG62_05360 9c639049846f6daf00321b0cc35270e5 633 Pfam PF02355 Protein export membrane protein 455 621 1.7E-19 T 23-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CDG62_05360 9c639049846f6daf00321b0cc35270e5 633 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 8.4E-8 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_05360 9c639049846f6daf00321b0cc35270e5 633 PRINTS PR00702 Acriflavin resistance protein family signature 520 544 8.4E-8 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_05360 9c639049846f6daf00321b0cc35270e5 633 PRINTS PR00702 Acriflavin resistance protein family signature 595 618 8.4E-8 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_05360 9c639049846f6daf00321b0cc35270e5 633 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 632 50.031 T 23-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CDG62_05360 9c639049846f6daf00321b0cc35270e5 633 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 356 611 4.3E-72 T 23-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDG62_05360 9c639049846f6daf00321b0cc35270e5 633 Gene3D G3DSA:1.20.1640.10 468 625 3.2E-14 T 23-10-2018 CDG62_16815 0aae867856850c9c6eb527e7b2a1958d 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 280 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDG62_16815 0aae867856850c9c6eb527e7b2a1958d 289 Gene3D G3DSA:1.10.10.60 235 288 3.4E-18 T 23-10-2018 CDG62_16815 0aae867856850c9c6eb527e7b2a1958d 289 SUPERFAMILY SSF46689 187 235 2.24E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_16815 0aae867856850c9c6eb527e7b2a1958d 289 Pfam PF12833 Helix-turn-helix domain 207 285 2.1E-23 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_16815 0aae867856850c9c6eb527e7b2a1958d 289 SUPERFAMILY SSF46689 237 286 3.58E-14 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_16815 0aae867856850c9c6eb527e7b2a1958d 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 268 1.2E-7 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_16815 0aae867856850c9c6eb527e7b2a1958d 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 284 1.2E-7 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_16815 0aae867856850c9c6eb527e7b2a1958d 289 Gene3D G3DSA:1.10.10.60 183 234 9.1E-16 T 23-10-2018 CDG62_16815 0aae867856850c9c6eb527e7b2a1958d 289 SMART SM00342 201 284 6.2E-34 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_06695 1c654ef25ee5bb86c42c3afb952af1c6 95 Gene3D G3DSA:3.30.70.260 8 95 1.8E-22 T 23-10-2018 CDG62_06695 1c654ef25ee5bb86c42c3afb952af1c6 95 SUPERFAMILY SSF117991 9 95 7.32E-22 T 23-10-2018 IPR027471 YbeD-like domain superfamily CDG62_06695 1c654ef25ee5bb86c42c3afb952af1c6 95 Pfam PF04359 Protein of unknown function (DUF493) 13 95 4.3E-24 T 23-10-2018 IPR007454 Uncharacterised protein family UPF0250 CDG62_16870 1f0e93788ca3029b307919a2cc85c1cd 565 SMART SM00917 422 550 4.7E-27 T 23-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG62_16870 1f0e93788ca3029b307919a2cc85c1cd 565 SUPERFAMILY SSF51569 22 330 5.86E-98 T 23-10-2018 CDG62_16870 1f0e93788ca3029b307919a2cc85c1cd 565 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 549 6.8E-24 T 23-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG62_16870 1f0e93788ca3029b307919a2cc85c1cd 565 Pfam PF00682 HMGL-like 33 313 8.4E-76 T 23-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDG62_16870 1f0e93788ca3029b307919a2cc85c1cd 565 Gene3D G3DSA:3.30.160.270 377 549 1.2E-53 T 23-10-2018 CDG62_16870 1f0e93788ca3029b307919a2cc85c1cd 565 SUPERFAMILY SSF89000 388 438 2.94E-15 T 23-10-2018 CDG62_16870 1f0e93788ca3029b307919a2cc85c1cd 565 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 6 550 5.2E-230 T 23-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG62_16870 1f0e93788ca3029b307919a2cc85c1cd 565 SUPERFAMILY SSF110921 450 549 8.37E-29 T 23-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG62_16870 1f0e93788ca3029b307919a2cc85c1cd 565 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 40 56 - T 23-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG62_16870 1f0e93788ca3029b307919a2cc85c1cd 565 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 243 256 - T 23-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG62_16870 1f0e93788ca3029b307919a2cc85c1cd 565 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 7 551 52.378 T 23-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CDG62_16870 1f0e93788ca3029b307919a2cc85c1cd 565 Gene3D G3DSA:3.20.20.70 10 376 3.3E-152 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_18765 eb89988c2ff8077daf967fa05dc51c4b 553 Gene3D G3DSA:3.30.300.30 329 438 8.2E-13 T 23-10-2018 CDG62_18765 eb89988c2ff8077daf967fa05dc51c4b 553 SUPERFAMILY SSF54637 450 550 4.47E-10 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_18765 eb89988c2ff8077daf967fa05dc51c4b 553 Gene3D G3DSA:3.40.50.12780 11 317 3.3E-21 T 23-10-2018 CDG62_18765 eb89988c2ff8077daf967fa05dc51c4b 553 Pfam PF00501 AMP-binding enzyme 116 282 7.6E-11 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG62_18765 eb89988c2ff8077daf967fa05dc51c4b 553 SUPERFAMILY SSF56801 22 439 2.62E-42 T 23-10-2018 CDG62_18765 eb89988c2ff8077daf967fa05dc51c4b 553 Gene3D G3DSA:3.10.129.10 440 552 3.9E-21 T 23-10-2018 CDG62_10750 d5381ec105de4cf9faa9d6aec7482e7a 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 399 48.376 T 23-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_10750 d5381ec105de4cf9faa9d6aec7482e7a 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 23-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_10750 d5381ec105de4cf9faa9d6aec7482e7a 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 386 1.1E-49 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG62_10750 d5381ec105de4cf9faa9d6aec7482e7a 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 397 8.5E-166 T 23-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_10750 d5381ec105de4cf9faa9d6aec7482e7a 402 PIRSF PIRSF001413 4 402 2.9E-158 T 23-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_10750 d5381ec105de4cf9faa9d6aec7482e7a 402 Gene3D G3DSA:3.40.50.1100 18 214 1.9E-170 T 23-10-2018 CDG62_10750 d5381ec105de4cf9faa9d6aec7482e7a 402 Gene3D G3DSA:3.40.50.1100 62 391 1.9E-170 T 23-10-2018 CDG62_10750 d5381ec105de4cf9faa9d6aec7482e7a 402 SUPERFAMILY SSF53686 11 396 1.1E-133 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG62_11560 142954fffa1f3dc22698985774071c4a 548 Pfam PF13817 IS66 C-terminal element 504 541 8.2E-16 T 23-10-2018 IPR039552 Transposase IS66, C-terminal CDG62_11560 142954fffa1f3dc22698985774071c4a 548 Pfam PF03050 Transposase IS66 family 210 497 7.7E-104 T 23-10-2018 IPR004291 Transposase, IS66 CDG62_11560 142954fffa1f3dc22698985774071c4a 548 Pfam PF13007 Transposase C of IS166 homeodomain 71 143 6.5E-9 T 23-10-2018 IPR024463 Transposase TnpC, homeodomain CDG62_11560 142954fffa1f3dc22698985774071c4a 548 Pfam PF13005 zinc-finger binding domain of transposase IS66 154 196 4.6E-11 T 23-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 CDG62_13650 fec868f073656875954cec94781cb018 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 47 2.7E-7 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_13650 fec868f073656875954cec94781cb018 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 5.9E-7 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_13650 fec868f073656875954cec94781cb018 178 Gene3D G3DSA:2.160.10.10 1 178 3.3E-57 T 23-10-2018 CDG62_13650 fec868f073656875954cec94781cb018 178 SUPERFAMILY SSF51161 5 176 6.24E-47 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG62_18165 88e735c7b199829897d96ad41f00e89b 379 SUPERFAMILY SSF53686 11 376 1.44E-102 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG62_18165 88e735c7b199829897d96ad41f00e89b 379 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 57 70 - T 23-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CDG62_18165 88e735c7b199829897d96ad41f00e89b 379 Gene3D G3DSA:3.40.50.1100 17 350 1.9E-116 T 23-10-2018 CDG62_18165 88e735c7b199829897d96ad41f00e89b 379 PIRSF PIRSF038945 1 375 3.3E-153 T 23-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 CDG62_18165 88e735c7b199829897d96ad41f00e89b 379 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 343 2.4E-65 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG62_18165 88e735c7b199829897d96ad41f00e89b 379 TIGRFAM TIGR00260 thrC: threonine synthase 11 350 5.7E-92 T 23-10-2018 IPR004450 Threonine synthase-like CDG62_18165 88e735c7b199829897d96ad41f00e89b 379 Gene3D G3DSA:3.40.50.1100 65 161 1.9E-116 T 23-10-2018 CDG62_13830 39e330ea5b7112daba2c7fb366d6bc42 268 Gene3D G3DSA:3.30.2040.10 128 240 3.9E-92 T 23-10-2018 CDG62_13830 39e330ea5b7112daba2c7fb366d6bc42 268 Hamap MF_01830 Putative hydro-lyase . 14 268 50.86 T 23-10-2018 IPR016938 Uncharacterised protein family UPF0317 CDG62_13830 39e330ea5b7112daba2c7fb366d6bc42 268 Gene3D G3DSA:3.40.1640.10 23 256 3.9E-92 T 23-10-2018 CDG62_13830 39e330ea5b7112daba2c7fb366d6bc42 268 Pfam PF07286 Protein of unknown function (DUF1445) 118 260 1.3E-68 T 23-10-2018 IPR009906 D-glutamate cyclase CDG62_13830 39e330ea5b7112daba2c7fb366d6bc42 268 PIRSF PIRSF029755 3 267 1.9E-116 T 23-10-2018 IPR016938 Uncharacterised protein family UPF0317 CDG62_13830 39e330ea5b7112daba2c7fb366d6bc42 268 SUPERFAMILY SSF160920 15 261 8.63E-109 T 23-10-2018 IPR038021 Putative hydro-lyase CDG62_11025 a5c043e7926e4fef9f93fc6fe69b6d51 601 SUPERFAMILY SSF51905 61 509 1.31E-38 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_11025 a5c043e7926e4fef9f93fc6fe69b6d51 601 Pfam PF13450 NAD(P)-binding Rossmann-like domain 66 119 2.8E-6 T 23-10-2018 CDG62_11025 a5c043e7926e4fef9f93fc6fe69b6d51 601 Gene3D G3DSA:3.50.50.60 54 359 1.7E-49 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_11025 a5c043e7926e4fef9f93fc6fe69b6d51 601 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 256 7.6E-5 T 23-10-2018 CDG62_11025 a5c043e7926e4fef9f93fc6fe69b6d51 601 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 62 81 7.6E-5 T 23-10-2018 CDG62_11025 a5c043e7926e4fef9f93fc6fe69b6d51 601 Pfam PF00743 Flavin-binding monooxygenase-like 136 275 2.3E-8 T 23-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 CDG62_11025 a5c043e7926e4fef9f93fc6fe69b6d51 601 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 61 83 5.8E-6 T 23-10-2018 CDG62_11025 a5c043e7926e4fef9f93fc6fe69b6d51 601 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 263 5.8E-6 T 23-10-2018 CDG62_11025 a5c043e7926e4fef9f93fc6fe69b6d51 601 Gene3D G3DSA:3.50.50.60 405 589 3.1E-26 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14165 8fab33368ef63e9395a149445f114ebd 204 Pfam PF00484 Carbonic anhydrase 45 199 1.0E-37 T 23-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CDG62_14165 8fab33368ef63e9395a149445f114ebd 204 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 50 57 - T 23-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CDG62_14165 8fab33368ef63e9395a149445f114ebd 204 SUPERFAMILY SSF53056 2 203 1.05E-51 T 23-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CDG62_14165 8fab33368ef63e9395a149445f114ebd 204 SMART SM00947 38 203 4.3E-50 T 23-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CDG62_14165 8fab33368ef63e9395a149445f114ebd 204 Gene3D G3DSA:3.40.1050.10 1 204 7.4E-63 T 23-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 CDG62_02350 aa12431628878ceb086ca8b135758b4c 947 SUPERFAMILY SSF52540 71 492 1.57E-8 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_02350 aa12431628878ceb086ca8b135758b4c 947 SMART SM00487 44 280 1.2E-5 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG62_02350 aa12431628878ceb086ca8b135758b4c 947 Gene3D G3DSA:3.40.50.300 41 261 1.5E-15 T 23-10-2018 CDG62_02350 aa12431628878ceb086ca8b135758b4c 947 SUPERFAMILY SSF52540 32 241 1.11E-16 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_02350 aa12431628878ceb086ca8b135758b4c 947 Gene3D G3DSA:3.40.50.300 278 523 3.4E-9 T 23-10-2018 CDG62_02350 aa12431628878ceb086ca8b135758b4c 947 Pfam PF04851 Type III restriction enzyme, res subunit 47 240 1.8E-26 T 23-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDG62_11870 7b9095818b2c921cc65f38e7f5ad3aae 407 Gene3D G3DSA:1.10.540.10 25 133 3.6E-22 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG62_11870 7b9095818b2c921cc65f38e7f5ad3aae 407 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 250 383 6.0E-19 T 23-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CDG62_11870 7b9095818b2c921cc65f38e7f5ad3aae 407 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 130 3.1E-10 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG62_11870 7b9095818b2c921cc65f38e7f5ad3aae 407 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 18 406 5.6E-176 T 23-10-2018 IPR023922 Sulphate-starvation-induced SfnB CDG62_11870 7b9095818b2c921cc65f38e7f5ad3aae 407 SUPERFAMILY SSF56645 30 232 4.84E-41 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_11870 7b9095818b2c921cc65f38e7f5ad3aae 407 PIRSF PIRSF016578 11 398 2.8E-35 T 23-10-2018 CDG62_11870 7b9095818b2c921cc65f38e7f5ad3aae 407 Gene3D G3DSA:1.20.140.10 233 404 1.6E-47 T 23-10-2018 CDG62_11870 7b9095818b2c921cc65f38e7f5ad3aae 407 SUPERFAMILY SSF47203 245 402 6.28E-23 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_11870 7b9095818b2c921cc65f38e7f5ad3aae 407 Gene3D G3DSA:2.40.110.10 134 232 1.5E-28 T 23-10-2018 CDG62_18925 1591aa4c16515fe18cc40a083db34110 432 SUPERFAMILY SSF48179 202 293 9.86E-25 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_18925 1591aa4c16515fe18cc40a083db34110 432 PIRSF PIRSF500136 2 432 2.9E-151 T 23-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CDG62_18925 1591aa4c16515fe18cc40a083db34110 432 SUPERFAMILY SSF51735 8 192 8.28E-46 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_18925 1591aa4c16515fe18cc40a083db34110 432 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 8 181 6.2E-34 T 23-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG62_18925 1591aa4c16515fe18cc40a083db34110 432 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 319 419 1.3E-21 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG62_18925 1591aa4c16515fe18cc40a083db34110 432 PIRSF PIRSF000124 7 432 2.0E-57 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDG62_18925 1591aa4c16515fe18cc40a083db34110 432 Gene3D G3DSA:3.40.50.720 201 432 5.8E-60 T 23-10-2018 CDG62_18925 1591aa4c16515fe18cc40a083db34110 432 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 8 410 1.0E-118 T 23-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CDG62_18925 1591aa4c16515fe18cc40a083db34110 432 Gene3D G3DSA:3.40.50.720 3 199 5.2E-60 T 23-10-2018 CDG62_18925 1591aa4c16515fe18cc40a083db34110 432 SUPERFAMILY SSF52413 303 430 1.15E-28 T 23-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 CDG62_18925 1591aa4c16515fe18cc40a083db34110 432 SMART SM00984 318 419 5.5E-36 T 23-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG62_18925 1591aa4c16515fe18cc40a083db34110 432 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 203 291 1.2E-23 T 23-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CDG62_06460 5c35eabab80c36065482c1aa23fbf4aa 595 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 211 595 6.1E-161 T 23-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06460 5c35eabab80c36065482c1aa23fbf4aa 595 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 45 172 2.3E-40 T 23-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06460 5c35eabab80c36065482c1aa23fbf4aa 595 SUPERFAMILY SSF56762 221 595 4.97E-120 T 23-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06460 5c35eabab80c36065482c1aa23fbf4aa 595 Gene3D G3DSA:3.30.460.80 3 153 1.3E-35 T 23-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06460 5c35eabab80c36065482c1aa23fbf4aa 595 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 101 155 1.0E-24 T 23-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06460 5c35eabab80c36065482c1aa23fbf4aa 595 Gene3D G3DSA:1.10.645.20 210 595 9.1E-142 T 23-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06460 5c35eabab80c36065482c1aa23fbf4aa 595 SUPERFAMILY SSF143243 22 225 2.09E-59 T 23-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06460 5c35eabab80c36065482c1aa23fbf4aa 595 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 13 595 68.811 T 23-10-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 CDG62_06460 5c35eabab80c36065482c1aa23fbf4aa 595 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 207 595 40.71 T 23-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06460 5c35eabab80c36065482c1aa23fbf4aa 595 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 248 259 - T 23-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06460 5c35eabab80c36065482c1aa23fbf4aa 595 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 22 181 25.571 T 23-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06460 5c35eabab80c36065482c1aa23fbf4aa 595 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 46 173 3.8E-41 T 23-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06460 5c35eabab80c36065482c1aa23fbf4aa 595 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 325 595 1.3E-98 T 23-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06460 5c35eabab80c36065482c1aa23fbf4aa 595 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 134 155 - T 23-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_05395 8fbc2d3a073a89834f4e650cd915ff9a 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 403 8.9E-20 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_05395 8fbc2d3a073a89834f4e650cd915ff9a 422 Gene3D G3DSA:3.30.565.10 250 402 1.2E-33 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_05395 8fbc2d3a073a89834f4e650cd915ff9a 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 402 3.5E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_05395 8fbc2d3a073a89834f4e650cd915ff9a 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 383 3.5E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_05395 8fbc2d3a073a89834f4e650cd915ff9a 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 344 3.5E-11 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_05395 8fbc2d3a073a89834f4e650cd915ff9a 422 SUPERFAMILY SSF47384 164 247 1.61E-11 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG62_05395 8fbc2d3a073a89834f4e650cd915ff9a 422 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 246 9.2E-7 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_05395 8fbc2d3a073a89834f4e650cd915ff9a 422 SUPERFAMILY SSF55874 236 403 1.18E-35 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_05395 8fbc2d3a073a89834f4e650cd915ff9a 422 SMART SM00387 291 405 2.0E-23 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_05395 8fbc2d3a073a89834f4e650cd915ff9a 422 SMART SM00388 178 246 1.0E-7 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_05395 8fbc2d3a073a89834f4e650cd915ff9a 422 Gene3D G3DSA:1.10.287.130 154 244 2.9E-11 T 23-10-2018 CDG62_02930 3bed76832020fa7a64678440dd5dd576 111 Gene3D G3DSA:2.60.300.12 5 111 1.2E-32 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDG62_02930 3bed76832020fa7a64678440dd5dd576 111 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 111 32.572 T 23-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 CDG62_02930 3bed76832020fa7a64678440dd5dd576 111 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 6 110 2.2E-37 T 23-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CDG62_02930 3bed76832020fa7a64678440dd5dd576 111 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 106 3.7E-18 T 23-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CDG62_02930 3bed76832020fa7a64678440dd5dd576 111 SUPERFAMILY SSF89360 5 100 1.96E-29 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDG62_02930 3bed76832020fa7a64678440dd5dd576 111 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 92 109 - T 23-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CDG62_00945 00511246f87a291582f53db05b524f81 327 Pfam PF01051 Initiator Replication protein 15 237 3.8E-53 T 23-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CDG62_00945 00511246f87a291582f53db05b524f81 327 SUPERFAMILY SSF46785 141 240 2.78E-33 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00945 00511246f87a291582f53db05b524f81 327 Gene3D G3DSA:1.10.10.10 6 153 1.8E-38 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_00945 00511246f87a291582f53db05b524f81 327 SUPERFAMILY SSF46785 19 149 1.27E-26 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00945 00511246f87a291582f53db05b524f81 327 Gene3D G3DSA:1.10.10.10 154 246 1.4E-30 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_13795 fa8e2740283602bc03427b81fb2b35dc 355 SUPERFAMILY SSF51556 6 312 2.41E-70 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG62_13795 fa8e2740283602bc03427b81fb2b35dc 355 Gene3D G3DSA:3.20.20.140 4 311 5.2E-80 T 23-10-2018 CDG62_13795 fa8e2740283602bc03427b81fb2b35dc 355 Pfam PF04909 Amidohydrolase 6 312 3.1E-32 T 23-10-2018 IPR006680 Amidohydrolase-related GO:0016787 CDG62_07605 7fc560dc9c2a8fdb077886e439018c43 266 SUPERFAMILY SSF53927 16 266 2.98E-74 T 23-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CDG62_07605 7fc560dc9c2a8fdb077886e439018c43 266 PIRSF PIRSF015626 3 266 2.5E-74 T 23-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CDG62_07605 7fc560dc9c2a8fdb077886e439018c43 266 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 9 266 29.075 T 23-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CDG62_07605 7fc560dc9c2a8fdb077886e439018c43 266 Gene3D G3DSA:3.10.20.10 36 121 1.2E-6 T 23-10-2018 CDG62_07605 7fc560dc9c2a8fdb077886e439018c43 266 Pfam PF02634 FdhD/NarQ family 34 266 3.2E-66 T 23-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CDG62_07605 7fc560dc9c2a8fdb077886e439018c43 266 Gene3D G3DSA:3.40.140.10 129 266 4.4E-44 T 23-10-2018 CDG62_07605 7fc560dc9c2a8fdb077886e439018c43 266 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 30 266 1.7E-68 T 23-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CDG62_03405 7194c8ebfcee2418f189e401379c4a15 272 Gene3D G3DSA:3.40.50.300 30 272 1.2E-54 T 23-10-2018 CDG62_03405 7194c8ebfcee2418f189e401379c4a15 272 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 31 272 1.2E-111 T 23-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD CDG62_03405 7194c8ebfcee2418f189e401379c4a15 272 Pfam PF00005 ABC transporter 47 202 5.7E-28 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_03405 7194c8ebfcee2418f189e401379c4a15 272 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 250 271 4.3E-6 T 23-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CDG62_03405 7194c8ebfcee2418f189e401379c4a15 272 SUPERFAMILY SSF52540 32 270 3.91E-53 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10630 cec9e1f84806e8c2ce750fecf30dbc56 157 Gene3D G3DSA:1.10.10.10 1 144 1.3E-52 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_10630 cec9e1f84806e8c2ce750fecf30dbc56 157 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 23-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CDG62_10630 cec9e1f84806e8c2ce750fecf30dbc56 157 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 6.6E-46 T 23-10-2018 IPR000944 Transcription regulator Rrf2-type CDG62_10630 cec9e1f84806e8c2ce750fecf30dbc56 157 SUPERFAMILY SSF46785 2 132 1.26E-37 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_10630 cec9e1f84806e8c2ce750fecf30dbc56 157 Pfam PF02082 Transcriptional regulator 1 83 6.2E-30 T 23-10-2018 IPR000944 Transcription regulator Rrf2-type CDG62_06275 9ed821632262a6d056cb503355f5e5ec 214 PIRSF PIRSF006755 3 210 6.5E-58 T 23-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CDG62_06275 9ed821632262a6d056cb503355f5e5ec 214 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 176 1.6E-49 T 23-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CDG62_06275 9ed821632262a6d056cb503355f5e5ec 214 Pfam PF13500 AAA domain 6 188 8.7E-34 T 23-10-2018 CDG62_06275 9ed821632262a6d056cb503355f5e5ec 214 Gene3D G3DSA:3.40.50.300 1 205 3.3E-54 T 23-10-2018 CDG62_06275 9ed821632262a6d056cb503355f5e5ec 214 SUPERFAMILY SSF52540 1 199 1.33E-43 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_06275 9ed821632262a6d056cb503355f5e5ec 214 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 213 25.215 T 23-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CDG62_07510 4dfaab135dd5857d169dfd937bafdfbb 356 Gene3D G3DSA:2.40.160.20 99 356 7.5E-58 T 23-10-2018 CDG62_07510 4dfaab135dd5857d169dfd937bafdfbb 356 Pfam PF03922 OmpW family 120 356 4.5E-19 T 23-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CDG62_07510 4dfaab135dd5857d169dfd937bafdfbb 356 SUPERFAMILY SSF56925 123 356 3.4E-17 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG62_06150 3061afb3fd0ae637d6138e27f9ba426c 134 Gene3D G3DSA:3.90.79.10 2 125 5.5E-27 T 23-10-2018 CDG62_06150 3061afb3fd0ae637d6138e27f9ba426c 134 PRINTS PR00502 NUDIX hydrolase family signature 48 63 4.1E-6 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG62_06150 3061afb3fd0ae637d6138e27f9ba426c 134 PRINTS PR00502 NUDIX hydrolase family signature 34 48 4.1E-6 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG62_06150 3061afb3fd0ae637d6138e27f9ba426c 134 SUPERFAMILY SSF55811 6 113 4.33E-26 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG62_06150 3061afb3fd0ae637d6138e27f9ba426c 134 Pfam PF00293 NUDIX domain 8 113 3.2E-18 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG62_15550 ab2b359585e5778e6980af420b9bf681 262 SUPERFAMILY SSF51366 1 248 1.13E-67 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG62_15550 ab2b359585e5778e6980af420b9bf681 262 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 23-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_15550 ab2b359585e5778e6980af420b9bf681 262 Gene3D G3DSA:3.20.20.70 1 262 1.1E-78 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_15550 ab2b359585e5778e6980af420b9bf681 262 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 9 257 5.2E-63 T 23-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_15550 ab2b359585e5778e6980af420b9bf681 262 Pfam PF00290 Tryptophan synthase alpha chain 9 255 1.0E-70 T 23-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_15550 ab2b359585e5778e6980af420b9bf681 262 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 260 29.304 T 23-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 SUPERFAMILY SSF52172 1047 1157 3.27E-14 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 SUPERFAMILY SSF47384 793 870 3.73E-11 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 SMART SM00448 1047 1156 8.7E-7 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 Pfam PF12860 PAS fold 658 771 1.2E-43 T 23-10-2018 CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 SUPERFAMILY SSF55874 861 1029 3.01E-34 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 988 1006 7.8E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1012 1025 7.8E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 953 967 7.8E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 SMART SM00387 914 1028 5.3E-20 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 Gene3D G3DSA:3.30.565.10 869 1028 6.3E-32 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 Gene3D G3DSA:3.40.50.2300 1041 1159 2.9E-17 T 23-10-2018 CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 915 1025 4.7E-17 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 Pfam PF00512 His Kinase A (phospho-acceptor) domain 805 870 4.5E-9 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 SUPERFAMILY SSF55785 645 765 1.95E-9 T 23-10-2018 IPR035965 PAS domain superfamily CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 Gene3D G3DSA:1.10.287.130 771 868 6.6E-12 T 23-10-2018 CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 Gene3D G3DSA:3.30.450.20 640 770 2.4E-12 T 23-10-2018 CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 SMART SM00388 805 870 7.4E-12 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_03710 8682164fa5a138dfb604bc634755b5c5 1165 Pfam PF00072 Response regulator receiver domain 1049 1154 3.2E-11 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_02920 5e4008075a6e55f1d9f5d29b5a0b4631 336 Gene3D G3DSA:3.40.190.170 40 246 5.0E-10 T 23-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily CDG62_02920 5e4008075a6e55f1d9f5d29b5a0b4631 336 SUPERFAMILY SSF53850 106 211 6.79E-5 T 23-10-2018 CDG62_01265 b6a841394f873875355bd03f83d311f9 363 Pfam PF01545 Cation efflux family 68 261 2.9E-46 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG62_01265 b6a841394f873875355bd03f83d311f9 363 SUPERFAMILY SSF161111 63 262 3.01E-55 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG62_01265 b6a841394f873875355bd03f83d311f9 363 Gene3D G3DSA:3.30.70.1350 264 343 2.6E-7 T 23-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CDG62_01265 b6a841394f873875355bd03f83d311f9 363 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 64 341 8.0E-88 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG62_01265 b6a841394f873875355bd03f83d311f9 363 Pfam PF16916 Dimerisation domain of Zinc Transporter 269 340 1.0E-7 T 23-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain CDG62_01265 b6a841394f873875355bd03f83d311f9 363 SUPERFAMILY SSF160240 266 340 2.62E-13 T 23-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CDG62_01265 b6a841394f873875355bd03f83d311f9 363 Gene3D G3DSA:1.20.1510.10 64 261 1.7E-43 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG62_17510 6e155b5ad9077f1c5ae6db78351e263c 118 Pfam PF13591 MerR HTH family regulatory protein 27 107 1.1E-14 T 23-10-2018 CDG62_17510 6e155b5ad9077f1c5ae6db78351e263c 118 Gene3D G3DSA:1.10.1660.10 20 111 5.3E-20 T 23-10-2018 CDG62_03115 9897f6b72190410282d5b1f0ead34f68 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 4.4E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_03115 9897f6b72190410282d5b1f0ead34f68 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 4.4E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_03115 9897f6b72190410282d5b1f0ead34f68 210 Gene3D G3DSA:1.10.357.10 2 202 1.6E-41 T 23-10-2018 CDG62_03115 9897f6b72190410282d5b1f0ead34f68 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 60 1.8E-15 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_03115 9897f6b72190410282d5b1f0ead34f68 210 SUPERFAMILY SSF46689 8 71 5.49E-18 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_03115 9897f6b72190410282d5b1f0ead34f68 210 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 162 203 3.2E-5 T 23-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type CDG62_03115 9897f6b72190410282d5b1f0ead34f68 210 SUPERFAMILY SSF48498 90 199 1.02E-5 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG62_18265 e6af2a4488f6087a47b86db0fb82cdcc 495 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 491 3.0E-190 T 23-10-2018 IPR004482 Mg chelatase-related protein CDG62_18265 e6af2a4488f6087a47b86db0fb82cdcc 495 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 491 5.7E-30 T 23-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain CDG62_18265 e6af2a4488f6087a47b86db0fb82cdcc 495 SUPERFAMILY SSF54211 11 167 1.21E-33 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_18265 e6af2a4488f6087a47b86db0fb82cdcc 495 Gene3D G3DSA:3.40.50.300 169 494 1.2E-54 T 23-10-2018 CDG62_18265 e6af2a4488f6087a47b86db0fb82cdcc 495 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 392 8.7E-96 T 23-10-2018 IPR000523 Magnesium chelatase ChlI domain CDG62_18265 e6af2a4488f6087a47b86db0fb82cdcc 495 Gene3D G3DSA:3.30.230.10 20 168 5.9E-10 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG62_18265 e6af2a4488f6087a47b86db0fb82cdcc 495 SMART SM00382 210 389 1.6E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_18265 e6af2a4488f6087a47b86db0fb82cdcc 495 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 7.5E-45 T 23-10-2018 CDG62_18265 e6af2a4488f6087a47b86db0fb82cdcc 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 314 327 3.1E-5 T 23-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CDG62_18265 e6af2a4488f6087a47b86db0fb82cdcc 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 286 300 3.1E-5 T 23-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CDG62_18265 e6af2a4488f6087a47b86db0fb82cdcc 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 338 350 3.1E-5 T 23-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CDG62_18265 e6af2a4488f6087a47b86db0fb82cdcc 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 3.1E-5 T 23-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 CDG62_18265 e6af2a4488f6087a47b86db0fb82cdcc 495 SUPERFAMILY SSF52540 188 491 4.56E-47 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_03250 667bac9dafdfcfefd66acf5735cb5169 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 31.554 T 23-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG62_03250 667bac9dafdfcfefd66acf5735cb5169 239 Gene3D G3DSA:3.30.200.20 7 231 8.3E-93 T 23-10-2018 CDG62_03250 667bac9dafdfcfefd66acf5735cb5169 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 23-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG62_03250 667bac9dafdfcfefd66acf5735cb5169 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 23-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG62_03250 667bac9dafdfcfefd66acf5735cb5169 239 Gene3D G3DSA:3.30.470.20 85 220 8.3E-93 T 23-10-2018 CDG62_03250 667bac9dafdfcfefd66acf5735cb5169 239 Pfam PF01259 SAICAR synthetase 7 231 2.7E-65 T 23-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG62_03250 667bac9dafdfcfefd66acf5735cb5169 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 233 2.6E-78 T 23-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CDG62_03250 667bac9dafdfcfefd66acf5735cb5169 239 SUPERFAMILY SSF56104 2 232 5.23E-80 T 23-10-2018 CDG62_07275 6f3d53e1fb6b9b5fe54627bbbc09a2a3 269 Gene3D G3DSA:3.40.50.720 1 265 1.3E-55 T 23-10-2018 CDG62_07275 6f3d53e1fb6b9b5fe54627bbbc09a2a3 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG62_07275 6f3d53e1fb6b9b5fe54627bbbc09a2a3 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.5E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_07275 6f3d53e1fb6b9b5fe54627bbbc09a2a3 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 4.5E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_07275 6f3d53e1fb6b9b5fe54627bbbc09a2a3 269 SUPERFAMILY SSF51735 2 262 4.23E-51 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_07275 6f3d53e1fb6b9b5fe54627bbbc09a2a3 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 8.7E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_07275 6f3d53e1fb6b9b5fe54627bbbc09a2a3 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.7E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_07275 6f3d53e1fb6b9b5fe54627bbbc09a2a3 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 8.7E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_07275 6f3d53e1fb6b9b5fe54627bbbc09a2a3 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 8.7E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_07275 6f3d53e1fb6b9b5fe54627bbbc09a2a3 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 8.7E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_07275 6f3d53e1fb6b9b5fe54627bbbc09a2a3 269 Pfam PF00106 short chain dehydrogenase 2 195 8.6E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_05275 e98ec2b97fedb601f5bf8e24e38f359e 234 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 143 2.9E-6 T 23-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CDG62_05275 e98ec2b97fedb601f5bf8e24e38f359e 234 SUPERFAMILY SSF49354 17 143 7.06E-9 T 23-10-2018 IPR008962 PapD-like superfamily CDG62_06215 0f5d76be001daf3680754beccdc0670c 331 SMART SM00771 192 320 1.4E-33 T 23-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CDG62_06215 0f5d76be001daf3680754beccdc0670c 331 SUPERFAMILY SSF64383 193 323 2.22E-26 T 23-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 CDG62_06215 0f5d76be001daf3680754beccdc0670c 331 Gene3D G3DSA:3.30.1400.10 191 327 5.2E-29 T 23-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 CDG62_06215 0f5d76be001daf3680754beccdc0670c 331 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 195 318 7.9E-29 T 23-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CDG62_06215 0f5d76be001daf3680754beccdc0670c 331 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 207 328 4.0E-44 T 23-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CDG62_18135 d7e814a8c5a378408f0bc150de439d78 619 SUPERFAMILY SSF52540 5 168 2.14E-36 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_18135 d7e814a8c5a378408f0bc150de439d78 619 Pfam PF02421 Ferrous iron transport protein B 6 165 1.2E-56 T 23-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 CDG62_18135 d7e814a8c5a378408f0bc150de439d78 619 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 1.1E-5 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_18135 d7e814a8c5a378408f0bc150de439d78 619 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 1.1E-5 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_18135 d7e814a8c5a378408f0bc150de439d78 619 Pfam PF07664 Ferrous iron transport protein B C terminus 395 447 2.7E-15 T 23-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CDG62_18135 d7e814a8c5a378408f0bc150de439d78 619 Gene3D G3DSA:3.40.50.300 5 196 3.6E-43 T 23-10-2018 CDG62_18135 d7e814a8c5a378408f0bc150de439d78 619 Pfam PF07670 Nucleoside recognition 452 589 2.5E-24 T 23-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CDG62_18135 d7e814a8c5a378408f0bc150de439d78 619 Pfam PF07670 Nucleoside recognition 284 375 5.5E-11 T 23-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CDG62_07495 9fd4406eb2dcfcff9e1f4f6da3f0c674 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 23-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CDG62_07495 9fd4406eb2dcfcff9e1f4f6da3f0c674 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 358 50.713 T 23-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CDG62_07495 9fd4406eb2dcfcff9e1f4f6da3f0c674 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 357 6.2E-159 T 23-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CDG62_07495 9fd4406eb2dcfcff9e1f4f6da3f0c674 359 SUPERFAMILY SSF53383 2 357 3.71E-117 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_07495 9fd4406eb2dcfcff9e1f4f6da3f0c674 359 Gene3D G3DSA:3.40.640.10 16 249 9.3E-95 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_07495 9fd4406eb2dcfcff9e1f4f6da3f0c674 359 Gene3D G3DSA:3.90.1150.10 250 359 1.7E-43 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_07495 9fd4406eb2dcfcff9e1f4f6da3f0c674 359 Pfam PF00266 Aminotransferase class-V 4 347 6.5E-56 T 23-10-2018 IPR000192 Aminotransferase class V domain CDG62_07495 9fd4406eb2dcfcff9e1f4f6da3f0c674 359 PIRSF PIRSF000525 1 359 9.8E-151 T 23-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CDG62_14490 2fb8d11780eb5bd730dc1b3f5f9fa704 178 Gene3D G3DSA:2.40.50.180 50 116 9.6E-20 T 23-10-2018 CDG62_14490 2fb8d11780eb5bd730dc1b3f5f9fa704 178 SUPERFAMILY SSF50341 24 167 1.19E-28 T 23-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 CDG62_14490 2fb8d11780eb5bd730dc1b3f5f9fa704 178 Gene3D G3DSA:2.30.30.40 34 153 9.6E-20 T 23-10-2018 CDG62_14490 2fb8d11780eb5bd730dc1b3f5f9fa704 178 SMART SM00260 27 164 8.4E-8 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDG62_14490 2fb8d11780eb5bd730dc1b3f5f9fa704 178 Pfam PF01584 CheW-like domain 33 157 1.8E-22 T 23-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 CDG62_01410 70deb1b908c3449bf79b65c3c719e49f 301 SUPERFAMILY SSF52833 114 175 3.27E-6 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_01410 70deb1b908c3449bf79b65c3c719e49f 301 Gene3D G3DSA:3.40.30.10 129 276 8.9E-11 T 23-10-2018 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 300 3.6E-48 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 23-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 SUPERFAMILY SSF51905 2 312 6.78E-52 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 312 2.1E-119 T 23-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 4.3E-78 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 4.3E-78 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 293 312 4.3E-78 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 4.3E-78 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 4.3E-78 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 4.3E-78 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 4.3E-78 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 4.3E-78 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 4.3E-78 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 Gene3D G3DSA:3.50.50.60 8 311 1.2E-120 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.8E-37 T 23-10-2018 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 4.8E-37 T 23-10-2018 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.8E-37 T 23-10-2018 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 4.8E-37 T 23-10-2018 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 4.8E-37 T 23-10-2018 CDG62_15905 d9b5ef612da6f3da52f3bbdfb03360b5 317 Gene3D G3DSA:3.50.50.60 117 243 1.2E-120 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_06265 9f259323f9f876bf55c96f038c4bf1cd 385 Gene3D G3DSA:3.90.1150.10 39 382 1.1E-111 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_06265 9f259323f9f876bf55c96f038c4bf1cd 385 Pfam PF00155 Aminotransferase class I and II 39 383 8.7E-56 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG62_06265 9f259323f9f876bf55c96f038c4bf1cd 385 Gene3D G3DSA:3.40.640.10 56 292 1.1E-111 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_06265 9f259323f9f876bf55c96f038c4bf1cd 385 SUPERFAMILY SSF53383 3 385 1.8E-86 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_19180 8851d68cd955defff7bd1968b1d5ac7f 321 Pfam PF03741 Integral membrane protein TerC family 80 283 9.2E-52 T 23-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CDG62_19180 8851d68cd955defff7bd1968b1d5ac7f 321 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 314 8.0E-116 T 23-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 CDG62_05210 4a862154f770b2c6cb35ff679c0bacca 468 Gene3D G3DSA:2.20.200.10 105 350 1.2E-105 T 23-10-2018 CDG62_05210 4a862154f770b2c6cb35ff679c0bacca 468 Pfam PF02321 Outer membrane efflux protein 68 251 1.7E-22 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_05210 4a862154f770b2c6cb35ff679c0bacca 468 Pfam PF02321 Outer membrane efflux protein 280 459 2.1E-23 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_05210 4a862154f770b2c6cb35ff679c0bacca 468 Gene3D G3DSA:1.20.1600.10 58 460 1.2E-105 T 23-10-2018 CDG62_05210 4a862154f770b2c6cb35ff679c0bacca 468 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 17 460 1.6E-87 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CDG62_05210 4a862154f770b2c6cb35ff679c0bacca 468 SUPERFAMILY SSF56954 5 461 7.06E-90 T 23-10-2018 CDG62_08460 7683e588b8ab39d9ce58bfbc87ccd27a 170 Gene3D G3DSA:3.40.50.300 1 168 1.1E-54 T 23-10-2018 CDG62_08460 7683e588b8ab39d9ce58bfbc87ccd27a 170 SUPERFAMILY SSF52540 1 168 6.68E-55 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_08460 7683e588b8ab39d9ce58bfbc87ccd27a 170 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 165 5.5E-59 T 23-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 CDG62_08460 7683e588b8ab39d9ce58bfbc87ccd27a 170 PIRSF PIRSF006135 1 170 3.0E-53 T 23-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 CDG62_06820 e1182007d8d3e718d1ef2c59b354314c 427 Gene3D G3DSA:3.40.50.720 157 313 7.2E-42 T 23-10-2018 CDG62_06820 e1182007d8d3e718d1ef2c59b354314c 427 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 152 2.1E-47 T 23-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG62_06820 e1182007d8d3e718d1ef2c59b354314c 427 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 168 306 1.2E-39 T 23-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CDG62_06820 e1182007d8d3e718d1ef2c59b354314c 427 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 411 7.5E-15 T 23-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG62_06820 e1182007d8d3e718d1ef2c59b354314c 427 Gene3D G3DSA:3.30.460.30 2 154 9.7E-54 T 23-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG62_06820 e1182007d8d3e718d1ef2c59b354314c 427 PIRSF PIRSF000445 1 427 2.4E-141 T 23-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG62_06820 e1182007d8d3e718d1ef2c59b354314c 427 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 7.9E-121 T 23-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG62_06820 e1182007d8d3e718d1ef2c59b354314c 427 SUPERFAMILY SSF51735 159 315 2.95E-31 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_06820 e1182007d8d3e718d1ef2c59b354314c 427 SUPERFAMILY SSF69742 1 153 5.75E-46 T 23-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG62_06820 e1182007d8d3e718d1ef2c59b354314c 427 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 95 118 - T 23-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG62_06820 e1182007d8d3e718d1ef2c59b354314c 427 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 28.419 T 23-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG62_06820 e1182007d8d3e718d1ef2c59b354314c 427 SUPERFAMILY SSF69075 317 416 3.14E-20 T 23-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CDG62_02980 5079a9250ed87cd2e4bdd010478625a7 189 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 - T 23-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CDG62_02980 5079a9250ed87cd2e4bdd010478625a7 189 SUPERFAMILY SSF50891 20 182 7.6E-60 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_02980 5079a9250ed87cd2e4bdd010478625a7 189 Gene3D G3DSA:2.40.100.10 20 184 2.7E-64 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_02980 5079a9250ed87cd2e4bdd010478625a7 189 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 25 181 4.0E-50 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG62_02980 5079a9250ed87cd2e4bdd010478625a7 189 PIRSF PIRSF001467 8 185 1.0E-30 T 23-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CDG62_02980 5079a9250ed87cd2e4bdd010478625a7 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 4.6E-13 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG62_02980 5079a9250ed87cd2e4bdd010478625a7 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 138 153 4.6E-13 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG62_02980 5079a9250ed87cd2e4bdd010478625a7 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 38 53 4.6E-13 T 23-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 CDG62_17075 59efbadfddb3189a42a470e7aa4f25af 81 Pfam PF04102 SlyX 16 81 3.3E-16 T 23-10-2018 IPR007236 SlyX CDG62_12225 cdf20e089dbca102ff0fa109ad14b995 214 Pfam PF04299 Putative FMN-binding domain 2 168 2.1E-63 T 23-10-2018 IPR007396 Transcriptional regulator PAI 2-type CDG62_12225 cdf20e089dbca102ff0fa109ad14b995 214 Gene3D G3DSA:2.30.110.10 1 207 3.4E-67 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CDG62_12225 cdf20e089dbca102ff0fa109ad14b995 214 PIRSF PIRSF010372 1 211 3.7E-82 T 23-10-2018 IPR007396 Transcriptional regulator PAI 2-type CDG62_12225 cdf20e089dbca102ff0fa109ad14b995 214 SUPERFAMILY SSF50475 11 192 6.54E-39 T 23-10-2018 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 Gene3D G3DSA:3.30.499.10 338 477 1.2E-48 T 23-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 SUPERFAMILY SSF53732 6 476 5.49E-162 T 23-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 Pfam PF00330 Aconitase family (aconitate hydratase) 13 469 6.5E-158 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 ProSitePatterns PS00450 Aconitase family signature 1. 350 366 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 8 477 6.1E-233 T 23-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 ProSitePatterns PS01244 Aconitase family signature 2. 411 424 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 Gene3D G3DSA:3.30.499.20 10 297 3.0E-95 T 23-10-2018 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 PRINTS PR00415 Aconitase family signature 354 365 2.5E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 PRINTS PR00415 Aconitase family signature 411 424 2.5E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 PRINTS PR00415 Aconitase family signature 93 106 2.5E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 PRINTS PR00415 Aconitase family signature 119 127 2.5E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 PRINTS PR00415 Aconitase family signature 130 143 2.5E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 PRINTS PR00415 Aconitase family signature 297 311 2.5E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 PRINTS PR00415 Aconitase family signature 206 219 2.5E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 PRINTS PR00415 Aconitase family signature 144 159 2.5E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 PRINTS PR00415 Aconitase family signature 220 233 2.5E-45 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_17165 1a41956cbb4cbed0f5110db8ddc7b8c7 477 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 7 477 58.813 T 23-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CDG62_18795 7975d1752b2ee580469f60074cb8e6f1 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.3E-13 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_18795 7975d1752b2ee580469f60074cb8e6f1 305 SUPERFAMILY SSF53850 89 298 4.96E-36 T 23-10-2018 CDG62_18795 7975d1752b2ee580469f60074cb8e6f1 305 Gene3D G3DSA:3.40.190.10 90 292 9.5E-67 T 23-10-2018 CDG62_18795 7975d1752b2ee580469f60074cb8e6f1 305 Pfam PF03466 LysR substrate binding domain 89 293 1.8E-35 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_18795 7975d1752b2ee580469f60074cb8e6f1 305 Gene3D G3DSA:1.10.10.10 1 89 1.5E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_18795 7975d1752b2ee580469f60074cb8e6f1 305 Gene3D G3DSA:3.40.190.10 163 271 9.5E-67 T 23-10-2018 CDG62_18795 7975d1752b2ee580469f60074cb8e6f1 305 SUPERFAMILY SSF46785 1 112 1.02E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_07420 83c32b1b1c73b11edaaf781aa5a3477e 281 SUPERFAMILY SSF54506 3 276 4.82E-54 T 23-10-2018 CDG62_07420 83c32b1b1c73b11edaaf781aa5a3477e 281 Gene3D G3DSA:3.10.310.10 4 272 2.6E-107 T 23-10-2018 CDG62_07420 83c32b1b1c73b11edaaf781aa5a3477e 281 Gene3D G3DSA:3.10.310.10 117 263 2.6E-107 T 23-10-2018 CDG62_07420 83c32b1b1c73b11edaaf781aa5a3477e 281 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 2.1E-91 T 23-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDG62_07420 83c32b1b1c73b11edaaf781aa5a3477e 281 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 38.772 T 23-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDG62_07420 83c32b1b1c73b11edaaf781aa5a3477e 281 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 23-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDG62_07420 83c32b1b1c73b11edaaf781aa5a3477e 281 Pfam PF01678 Diaminopimelate epimerase 155 267 3.0E-27 T 23-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDG62_07420 83c32b1b1c73b11edaaf781aa5a3477e 281 Pfam PF01678 Diaminopimelate epimerase 5 125 5.8E-32 T 23-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CDG62_16100 5d0a3f5679931651424cf5d533a42007 274 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 258 1.4E-70 T 23-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CDG62_16100 5d0a3f5679931651424cf5d533a42007 274 Pfam PF02673 Bacitracin resistance protein BacA 9 262 1.1E-80 T 23-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CDG62_16100 5d0a3f5679931651424cf5d533a42007 274 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 267 17.463 T 23-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CDG62_08195 d7a89e5de2de92bffe9296eb30b55077 261 Pfam PF05690 Thiazole biosynthesis protein ThiG 8 254 1.8E-107 T 23-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CDG62_08195 d7a89e5de2de92bffe9296eb30b55077 261 Gene3D G3DSA:3.20.20.70 1 259 1.9E-117 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_08195 d7a89e5de2de92bffe9296eb30b55077 261 SUPERFAMILY SSF110399 5 246 4.19E-87 T 23-10-2018 CDG62_08195 d7a89e5de2de92bffe9296eb30b55077 261 Hamap MF_00443 Thiazole synthase [thiG]. 5 260 41.573 T 23-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CDG62_09365 034521f1c31cf63bccf3d15086f1e0b4 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 73 1.3E-15 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_09365 034521f1c31cf63bccf3d15086f1e0b4 216 SUPERFAMILY SSF46689 16 85 6.16E-16 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_09365 034521f1c31cf63bccf3d15086f1e0b4 216 Gene3D G3DSA:1.10.357.10 90 216 5.4E-16 T 23-10-2018 CDG62_09365 034521f1c31cf63bccf3d15086f1e0b4 216 SUPERFAMILY SSF48498 94 213 1.0E-5 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG62_09365 034521f1c31cf63bccf3d15086f1e0b4 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 6.1E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_09365 034521f1c31cf63bccf3d15086f1e0b4 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 6.1E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_09365 034521f1c31cf63bccf3d15086f1e0b4 216 Gene3D G3DSA:1.10.10.60 8 73 3.0E-21 T 23-10-2018 CDG62_10535 08ed6677e02c9d2a8ccaa6a5fb22fc28 179 Pfam PF04970 Lecithin retinol acyltransferase 9 107 4.1E-15 T 23-10-2018 IPR007053 LRAT-like domain CDG62_16280 eec42d2e821c50eaa70004847f692c37 495 SMART SM00382 245 368 1.5E-5 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_16280 eec42d2e821c50eaa70004847f692c37 495 Gene3D G3DSA:3.30.300.160 2 84 1.3E-7 T 23-10-2018 CDG62_16280 eec42d2e821c50eaa70004847f692c37 495 SUPERFAMILY SSF52540 102 490 4.01E-102 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_16280 eec42d2e821c50eaa70004847f692c37 495 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 8 490 3.8E-209 T 23-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 CDG62_16280 eec42d2e821c50eaa70004847f692c37 495 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 312 326 - T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG62_16280 eec42d2e821c50eaa70004847f692c37 495 SUPERFAMILY SSF160246 8 70 5.75E-15 T 23-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily CDG62_16280 eec42d2e821c50eaa70004847f692c37 495 Gene3D G3DSA:3.40.50.300 220 493 2.8E-115 T 23-10-2018 CDG62_16280 eec42d2e821c50eaa70004847f692c37 495 Gene3D G3DSA:3.30.450.90 85 217 7.4E-52 T 23-10-2018 CDG62_16280 eec42d2e821c50eaa70004847f692c37 495 Pfam PF00437 Type II/IV secretion system protein 119 384 1.5E-87 T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG62_07805 661908a7717171ca2b7ed3f31965bef4 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 8.8E-21 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_07805 661908a7717171ca2b7ed3f31965bef4 220 Gene3D G3DSA:1.10.10.10 122 220 4.1E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_07805 661908a7717171ca2b7ed3f31965bef4 220 Pfam PF00072 Response regulator receiver domain 3 113 2.4E-25 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_07805 661908a7717171ca2b7ed3f31965bef4 220 SMART SM00862 145 216 1.3E-22 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_07805 661908a7717171ca2b7ed3f31965bef4 220 SMART SM00448 1 112 9.8E-35 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_07805 661908a7717171ca2b7ed3f31965bef4 220 Gene3D G3DSA:3.40.50.2300 1 121 1.1E-33 T 23-10-2018 CDG62_07805 661908a7717171ca2b7ed3f31965bef4 220 SUPERFAMILY SSF52172 2 178 9.52E-37 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_08575 5f7309a4773edd23d4c72e2a14138bde 341 SMART SM00382 30 227 4.5E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_08575 5f7309a4773edd23d4c72e2a14138bde 341 SUPERFAMILY SSF55021 248 336 5.15E-21 T 23-10-2018 CDG62_08575 5f7309a4773edd23d4c72e2a14138bde 341 Gene3D G3DSA:3.40.50.300 1 232 2.8E-73 T 23-10-2018 CDG62_08575 5f7309a4773edd23d4c72e2a14138bde 341 SMART SM00930 262 337 1.8E-21 T 23-10-2018 IPR018449 NIL domain CDG62_08575 5f7309a4773edd23d4c72e2a14138bde 341 Pfam PF09383 NIL domain 265 335 1.4E-19 T 23-10-2018 IPR018449 NIL domain CDG62_08575 5f7309a4773edd23d4c72e2a14138bde 341 Pfam PF00005 ABC transporter 21 169 1.5E-35 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_08575 5f7309a4773edd23d4c72e2a14138bde 341 SUPERFAMILY SSF52540 1 240 6.44E-82 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_08575 5f7309a4773edd23d4c72e2a14138bde 341 Gene3D G3DSA:3.30.70.260 233 340 4.5E-27 T 23-10-2018 CDG62_08575 5f7309a4773edd23d4c72e2a14138bde 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_12855 f3b56bfb8f6cb1d0be24a9e12a70f644 275 ProSitePatterns PS00760 Signal peptidases I lysine active site. 127 139 - T 23-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CDG62_12855 f3b56bfb8f6cb1d0be24a9e12a70f644 275 ProSitePatterns PS00501 Signal peptidases I serine active site. 70 77 - T 23-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CDG62_12855 f3b56bfb8f6cb1d0be24a9e12a70f644 275 Gene3D G3DSA:2.10.109.10 59 258 1.1E-65 T 23-10-2018 CDG62_12855 f3b56bfb8f6cb1d0be24a9e12a70f644 275 Pfam PF00717 Peptidase S24-like 68 149 1.3E-20 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDG62_12855 f3b56bfb8f6cb1d0be24a9e12a70f644 275 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 49 257 5.0E-46 T 23-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CDG62_12855 f3b56bfb8f6cb1d0be24a9e12a70f644 275 Gene3D G3DSA:2.170.230.10 136 218 1.1E-65 T 23-10-2018 CDG62_12855 f3b56bfb8f6cb1d0be24a9e12a70f644 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 219 238 2.3E-22 T 23-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CDG62_12855 f3b56bfb8f6cb1d0be24a9e12a70f644 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 61 77 2.3E-22 T 23-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CDG62_12855 f3b56bfb8f6cb1d0be24a9e12a70f644 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 125 137 2.3E-22 T 23-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CDG62_12855 f3b56bfb8f6cb1d0be24a9e12a70f644 275 Pfam PF10502 Signal peptidase, peptidase S26 218 256 1.3E-5 T 23-10-2018 IPR019533 Peptidase S26 CDG62_12855 f3b56bfb8f6cb1d0be24a9e12a70f644 275 SUPERFAMILY SSF51306 59 260 7.15E-63 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CDG62_00770 e5b19dbf1977292fa5e23735546ad7c2 188 Gene3D G3DSA:3.40.50.1390 5 128 1.7E-40 T 23-10-2018 CDG62_00770 e5b19dbf1977292fa5e23735546ad7c2 188 SMART SM00857 5 139 4.4E-48 T 23-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDG62_00770 e5b19dbf1977292fa5e23735546ad7c2 188 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 23-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CDG62_00770 e5b19dbf1977292fa5e23735546ad7c2 188 Pfam PF00239 Resolvase, N terminal domain 6 139 2.0E-37 T 23-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDG62_00770 e5b19dbf1977292fa5e23735546ad7c2 188 SUPERFAMILY SSF53041 5 139 6.54E-41 T 23-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 CDG62_13415 c3b19b172e379b4b3da3c0a933c113c3 384 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.7E-125 T 23-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 CDG62_13415 c3b19b172e379b4b3da3c0a933c113c3 384 Gene3D G3DSA:3.20.20.70 2 381 8.3E-126 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_13415 c3b19b172e379b4b3da3c0a933c113c3 384 PIRSF PIRSF000138 1 380 2.8E-120 T 23-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 CDG62_13415 c3b19b172e379b4b3da3c0a933c113c3 384 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 23-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 CDG62_13415 c3b19b172e379b4b3da3c0a933c113c3 384 SUPERFAMILY SSF51395 5 376 9.16E-100 T 23-10-2018 CDG62_13415 c3b19b172e379b4b3da3c0a933c113c3 384 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.449 T 23-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 CDG62_09450 5157a5cb3d32484a1f924384a63123c0 743 Gene3D G3DSA:3.40.718.10 405 663 4.3E-8 T 23-10-2018 CDG62_09450 5157a5cb3d32484a1f924384a63123c0 743 SUPERFAMILY SSF53659 5 742 0.0 T 23-10-2018 CDG62_09450 5157a5cb3d32484a1f924384a63123c0 743 PIRSF PIRSF009407 1 743 0.0 T 23-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CDG62_09450 5157a5cb3d32484a1f924384a63123c0 743 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 2 743 0.0 T 23-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CDG62_09450 5157a5cb3d32484a1f924384a63123c0 743 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 23-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CDG62_00950 a5469346548da2726ba8183afb4e7813 234 SUPERFAMILY SSF53098 72 191 1.21E-7 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_00950 a5469346548da2726ba8183afb4e7813 234 Pfam PF13610 DDE domain 73 212 3.3E-50 T 23-10-2018 IPR032874 DDE domain CDG62_12380 a5469346548da2726ba8183afb4e7813 234 SUPERFAMILY SSF53098 72 191 1.21E-7 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_12380 a5469346548da2726ba8183afb4e7813 234 Pfam PF13610 DDE domain 73 212 3.3E-50 T 23-10-2018 IPR032874 DDE domain CDG62_02680 a5469346548da2726ba8183afb4e7813 234 SUPERFAMILY SSF53098 72 191 1.21E-7 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_02680 a5469346548da2726ba8183afb4e7813 234 Pfam PF13610 DDE domain 73 212 3.3E-50 T 23-10-2018 IPR032874 DDE domain CDG62_13575 412cd5e44de07cc63811ac34342880a5 272 Pfam PF01551 Peptidase family M23 172 265 4.7E-29 T 23-10-2018 IPR016047 Peptidase M23 CDG62_13575 412cd5e44de07cc63811ac34342880a5 272 Pfam PF01476 LysM domain 54 96 5.9E-12 T 23-10-2018 IPR018392 LysM domain CDG62_13575 412cd5e44de07cc63811ac34342880a5 272 Gene3D G3DSA:2.70.70.10 115 270 9.4E-32 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG62_13575 412cd5e44de07cc63811ac34342880a5 272 SMART SM00257 53 97 9.1E-11 T 23-10-2018 IPR018392 LysM domain CDG62_13575 412cd5e44de07cc63811ac34342880a5 272 SUPERFAMILY SSF51261 53 269 1.15E-43 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG62_13575 412cd5e44de07cc63811ac34342880a5 272 Gene3D G3DSA:3.10.350.10 50 103 7.1E-14 T 23-10-2018 IPR036779 LysM domain superfamily CDG62_07100 48b069c91a35de163df5d497fbd4cf15 446 TIGRFAM TIGR00784 citMHS: citrate transporter 1 439 1.3E-175 T 23-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 CDG62_07100 48b069c91a35de163df5d497fbd4cf15 446 Pfam PF03600 Citrate transporter 13 387 3.4E-48 T 23-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CDG62_13710 078df99b346497c7f80b3526b417c37f 136 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 6 135 6.5E-46 T 23-10-2018 IPR000160 GGDEF domain CDG62_13710 078df99b346497c7f80b3526b417c37f 136 SUPERFAMILY SSF55073 7 135 1.41E-43 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_13710 078df99b346497c7f80b3526b417c37f 136 Pfam PF00990 Diguanylate cyclase, GGDEF domain 7 132 1.8E-40 T 23-10-2018 IPR000160 GGDEF domain CDG62_13710 078df99b346497c7f80b3526b417c37f 136 SMART SM00267 1 136 3.4E-32 T 23-10-2018 IPR000160 GGDEF domain CDG62_13710 078df99b346497c7f80b3526b417c37f 136 Gene3D G3DSA:3.30.70.270 1 136 1.1E-46 T 23-10-2018 CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 SUPERFAMILY SSF52777 416 653 1.82E-69 T 23-10-2018 CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 SUPERFAMILY SSF51230 114 192 6.28E-18 T 23-10-2018 IPR011053 Single hybrid motif CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 SUPERFAMILY SSF51230 224 315 8.9E-21 T 23-10-2018 IPR011053 Single hybrid motif CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 23 52 - T 23-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 247 276 - T 23-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 Gene3D G3DSA:2.40.50.100 117 192 7.6E-17 T 23-10-2018 CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 Gene3D G3DSA:2.40.50.100 1 77 1.4E-18 T 23-10-2018 CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 SUPERFAMILY SSF47005 351 394 2.49E-9 T 23-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 Gene3D G3DSA:2.40.50.100 224 302 2.0E-19 T 23-10-2018 CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 Gene3D G3DSA:4.10.320.10 345 396 4.7E-14 T 23-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 Pfam PF02817 e3 binding domain 355 389 3.0E-10 T 23-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 Pfam PF00364 Biotin-requiring enzyme 2 72 2.6E-18 T 23-10-2018 IPR000089 Biotin/lipoyl attachment CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 Pfam PF00364 Biotin-requiring enzyme 117 186 2.4E-15 T 23-10-2018 IPR000089 Biotin/lipoyl attachment CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 Pfam PF00364 Biotin-requiring enzyme 226 296 1.3E-17 T 23-10-2018 IPR000089 Biotin/lipoyl attachment CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 427 652 1.6E-65 T 23-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 SUPERFAMILY SSF51230 2 86 4.71E-20 T 23-10-2018 IPR011053 Single hybrid motif CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 138 167 - T 23-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CDG62_03575 24f69a05d1e6a4fc86a313d1929b262b 653 Gene3D G3DSA:3.30.559.10 411 653 6.4E-76 T 23-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 CDG62_08600 4c6d70bc2b6a1c43ceeee57da2200e12 524 PIRSF PIRSF000414 1 524 2.5E-220 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG62_08600 4c6d70bc2b6a1c43ceeee57da2200e12 524 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 455 1.4E-117 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG62_08600 4c6d70bc2b6a1c43ceeee57da2200e12 524 SMART SM00851 15 128 4.0E-61 T 23-10-2018 IPR011607 Methylglyoxal synthase-like domain CDG62_08600 4c6d70bc2b6a1c43ceeee57da2200e12 524 Pfam PF02142 MGS-like domain 15 128 2.0E-30 T 23-10-2018 IPR011607 Methylglyoxal synthase-like domain CDG62_08600 4c6d70bc2b6a1c43ceeee57da2200e12 524 SMART SM00798 133 456 1.4E-207 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG62_08600 4c6d70bc2b6a1c43ceeee57da2200e12 524 SUPERFAMILY SSF52335 3 192 1.44E-71 T 23-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CDG62_08600 4c6d70bc2b6a1c43ceeee57da2200e12 524 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4 524 2.0E-236 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG62_08600 4c6d70bc2b6a1c43ceeee57da2200e12 524 Gene3D G3DSA:3.40.140.20 387 524 1.8E-60 T 23-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG62_08600 4c6d70bc2b6a1c43ceeee57da2200e12 524 Gene3D G3DSA:3.40.140.20 209 364 1.7E-55 T 23-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG62_08600 4c6d70bc2b6a1c43ceeee57da2200e12 524 SUPERFAMILY SSF53927 212 524 1.5E-128 T 23-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CDG62_08600 4c6d70bc2b6a1c43ceeee57da2200e12 524 Gene3D G3DSA:3.40.50.1380 1 195 2.4E-85 T 23-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily CDG62_08600 4c6d70bc2b6a1c43ceeee57da2200e12 524 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 524 45.326 T 23-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG62_15930 e784a7a148284d53d29e2a0b4ebcd5d3 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 3.6E-5 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_15930 e784a7a148284d53d29e2a0b4ebcd5d3 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 232 246 3.6E-5 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_15930 e784a7a148284d53d29e2a0b4ebcd5d3 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 3.6E-5 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_15930 e784a7a148284d53d29e2a0b4ebcd5d3 301 Pfam PF12146 Serine aminopeptidase, S33 46 257 1.8E-20 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG62_15930 e784a7a148284d53d29e2a0b4ebcd5d3 301 Gene3D G3DSA:3.40.50.1820 10 272 2.9E-52 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_15930 e784a7a148284d53d29e2a0b4ebcd5d3 301 Gene3D G3DSA:1.10.10.800 138 220 2.9E-52 T 23-10-2018 CDG62_15930 e784a7a148284d53d29e2a0b4ebcd5d3 301 SUPERFAMILY SSF53474 7 291 2.55E-49 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_17480 55025dbaed888afc655f425a77ec012b 401 Gene3D G3DSA:1.20.81.30 55 170 4.0E-27 T 23-10-2018 CDG62_17480 55025dbaed888afc655f425a77ec012b 401 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 163 191 - T 23-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CDG62_17480 55025dbaed888afc655f425a77ec012b 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 1.2E-30 T 23-10-2018 IPR003004 GspF/PilC family CDG62_17480 55025dbaed888afc655f425a77ec012b 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 366 380 1.2E-30 T 23-10-2018 IPR003004 GspF/PilC family CDG62_17480 55025dbaed888afc655f425a77ec012b 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 1.2E-30 T 23-10-2018 IPR003004 GspF/PilC family CDG62_17480 55025dbaed888afc655f425a77ec012b 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 1.2E-30 T 23-10-2018 IPR003004 GspF/PilC family CDG62_17480 55025dbaed888afc655f425a77ec012b 401 Pfam PF00482 Type II secretion system (T2SS), protein F 271 393 6.0E-29 T 23-10-2018 IPR018076 Type II secretion system F domain CDG62_17480 55025dbaed888afc655f425a77ec012b 401 Pfam PF00482 Type II secretion system (T2SS), protein F 70 191 9.3E-29 T 23-10-2018 IPR018076 Type II secretion system F domain CDG62_17480 55025dbaed888afc655f425a77ec012b 401 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 401 9.5E-144 T 23-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 CDG62_17480 55025dbaed888afc655f425a77ec012b 401 Gene3D G3DSA:1.20.81.30 254 364 4.2E-27 T 23-10-2018 CDG62_03840 0cabed003ce6df2d2360d6bd1cefe264 435 Gene3D G3DSA:3.50.50.60 3 281 4.3E-20 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_03840 0cabed003ce6df2d2360d6bd1cefe264 435 Pfam PF01593 Flavin containing amine oxidoreductase 13 270 1.2E-15 T 23-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CDG62_03840 0cabed003ce6df2d2360d6bd1cefe264 435 SUPERFAMILY SSF51905 5 412 1.42E-35 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 1.9E-160 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 PIRSF PIRSF000099 2 429 6.3E-157 T 23-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 428 40.82 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 23-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 1.4E-78 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.4E-78 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.4E-78 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 1.4E-78 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 1.4E-78 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 1.4E-78 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 1.4E-78 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.4E-78 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 Gene3D G3DSA:3.40.50.1980 31 232 1.1E-123 T 23-10-2018 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 Pfam PF00815 Histidinol dehydrogenase 25 427 4.1E-168 T 23-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 Gene3D G3DSA:3.40.50.1980 234 350 1.1E-123 T 23-10-2018 CDG62_16165 73b55c624f0b3d6fc7346481112b3b2c 429 SUPERFAMILY SSF53720 27 428 1.26E-86 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG62_11290 c388c76e8849db38632ffb2188043abf 390 Gene3D G3DSA:3.40.47.10 4 272 1.2E-144 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_11290 c388c76e8849db38632ffb2188043abf 390 SUPERFAMILY SSF53901 3 266 2.05E-81 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_11290 c388c76e8849db38632ffb2188043abf 390 PIRSF PIRSF000429 1 390 2.1E-117 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_11290 c388c76e8849db38632ffb2188043abf 390 ProSitePatterns PS00099 Thiolases active site. 370 383 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 CDG62_11290 c388c76e8849db38632ffb2188043abf 390 SUPERFAMILY SSF53901 267 388 2.84E-39 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_11290 c388c76e8849db38632ffb2188043abf 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 82 100 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDG62_11290 c388c76e8849db38632ffb2188043abf 390 Pfam PF00108 Thiolase, N-terminal domain 2 258 9.8E-90 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG62_11290 c388c76e8849db38632ffb2188043abf 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 4 387 2.0E-133 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_11290 c388c76e8849db38632ffb2188043abf 390 Gene3D G3DSA:3.40.47.10 124 385 1.2E-144 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_11290 c388c76e8849db38632ffb2188043abf 390 Pfam PF02803 Thiolase, C-terminal domain 266 387 2.0E-43 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 369 436 8.2E-28 T 23-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 458 29.355 T 23-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 SUPERFAMILY SSF48295 356 458 5.23E-32 T 23-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 Gene3D G3DSA:1.10.1750.10 366 459 7.3E-31 T 23-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 SUPERFAMILY SSF52540 124 336 4.56E-40 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 Gene3D G3DSA:3.30.300.180 1 117 2.2E-19 T 23-10-2018 IPR038454 DnaA, N-terminal domain superfamily CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 Gene3D G3DSA:1.10.8.60 290 360 1.5E-21 T 23-10-2018 CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 3 456 3.5E-153 T 23-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 Pfam PF00308 Bacterial dnaA protein 123 341 9.4E-83 T 23-10-2018 IPR013317 Chromosomal replication initiator protein DnaA CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 Gene3D G3DSA:3.40.50.300 121 289 7.8E-45 T 23-10-2018 CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 ProSitePatterns PS01008 DnaA protein signature. 417 436 - T 23-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 SMART SM00382 156 286 1.9E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 SMART SM00760 367 436 3.4E-38 T 23-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 417 436 1.4E-48 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 157 177 1.4E-48 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 189 203 1.4E-48 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 221 235 1.4E-48 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 255 282 1.4E-48 T 23-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CDG62_02885 82d1ddd1057390c8922a4ef54eec47f3 459 Pfam PF11638 DnaA N-terminal domain 2 60 6.4E-13 T 23-10-2018 IPR024633 DnaA N-terminal domain CDG62_18085 9f72bf81c8c390874a192dade0f8623b 442 Gene3D G3DSA:1.20.1600.10 22 441 4.4E-99 T 23-10-2018 CDG62_18085 9f72bf81c8c390874a192dade0f8623b 442 Pfam PF02321 Outer membrane efflux protein 24 213 4.7E-21 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_18085 9f72bf81c8c390874a192dade0f8623b 442 Pfam PF02321 Outer membrane efflux protein 237 421 5.2E-31 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_18085 9f72bf81c8c390874a192dade0f8623b 442 SUPERFAMILY SSF56954 1 427 1.03E-86 T 23-10-2018 CDG62_18085 9f72bf81c8c390874a192dade0f8623b 442 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 19 436 5.4E-79 T 23-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 CDG62_05150 c05093edaa549f09bc3addb072938ae9 283 Gene3D G3DSA:1.10.150.650 102 175 8.4E-71 T 23-10-2018 CDG62_05150 c05093edaa549f09bc3addb072938ae9 283 SMART SM00481 4 69 9.2E-18 T 23-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDG62_05150 c05093edaa549f09bc3addb072938ae9 283 Gene3D G3DSA:3.20.20.140 4 256 8.4E-71 T 23-10-2018 CDG62_05150 c05093edaa549f09bc3addb072938ae9 283 Pfam PF02811 PHP domain 5 225 6.4E-13 T 23-10-2018 IPR004013 PHP domain GO:0003824 CDG62_05150 c05093edaa549f09bc3addb072938ae9 283 SUPERFAMILY SSF89550 4 267 1.08E-43 T 23-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CDG62_07230 5b70b39dfff39b786ecdccd28641e31a 414 SUPERFAMILY SSF141523 282 410 3.92E-27 T 23-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CDG62_07230 5b70b39dfff39b786ecdccd28641e31a 414 Gene3D G3DSA:2.40.440.10 223 414 4.1E-43 T 23-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CDG62_07230 5b70b39dfff39b786ecdccd28641e31a 414 SUPERFAMILY SSF47090 143 191 5.65E-11 T 23-10-2018 IPR036365 PGBD-like superfamily CDG62_07230 5b70b39dfff39b786ecdccd28641e31a 414 Gene3D G3DSA:1.10.101.10 139 200 2.2E-9 T 23-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 CDG62_07230 5b70b39dfff39b786ecdccd28641e31a 414 Pfam PF03734 L,D-transpeptidase catalytic domain 282 409 7.6E-18 T 23-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CDG62_07230 5b70b39dfff39b786ecdccd28641e31a 414 Pfam PF01471 Putative peptidoglycan binding domain 145 190 4.3E-8 T 23-10-2018 IPR002477 Peptidoglycan binding-like CDG62_04495 0e3f383be1c1c2cca11544327904d52c 384 Pfam PF06969 HemN C-terminal domain 312 372 3.5E-9 T 23-10-2018 IPR010723 HemN, C-terminal CDG62_04495 0e3f383be1c1c2cca11544327904d52c 384 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 11 375 4.3E-108 T 23-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 CDG62_04495 0e3f383be1c1c2cca11544327904d52c 384 SMART SM00729 10 230 7.4E-50 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG62_04495 0e3f383be1c1c2cca11544327904d52c 384 SUPERFAMILY SSF102114 8 384 1.44E-95 T 23-10-2018 CDG62_04495 0e3f383be1c1c2cca11544327904d52c 384 Gene3D G3DSA:3.80.30.20 3 311 1.5E-88 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDG62_04495 0e3f383be1c1c2cca11544327904d52c 384 Pfam PF04055 Radical SAM superfamily 15 185 2.5E-21 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG62_19075 fb5475d514fdc0c6c12c94b1cb472359 179 Pfam PF01252 Signal peptidase (SPase) II 24 165 7.9E-39 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDG62_19075 fb5475d514fdc0c6c12c94b1cb472359 179 ProSitePatterns PS00855 Signal peptidases II signature. 112 124 - T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDG62_19075 fb5475d514fdc0c6c12c94b1cb472359 179 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 109 124 3.6E-19 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDG62_19075 fb5475d514fdc0c6c12c94b1cb472359 179 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 145 161 3.6E-19 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDG62_19075 fb5475d514fdc0c6c12c94b1cb472359 179 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 61 69 3.6E-19 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDG62_19075 fb5475d514fdc0c6c12c94b1cb472359 179 TIGRFAM TIGR00077 lspA: signal peptidase II 17 172 3.9E-42 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDG62_19075 fb5475d514fdc0c6c12c94b1cb472359 179 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 15 170 17.576 T 23-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 CDG62_13455 39c98184804e00fba2d4bcf9730ec9a5 476 Pfam PF00324 Amino acid permease 28 445 8.8E-110 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG62_13455 39c98184804e00fba2d4bcf9730ec9a5 476 PIRSF PIRSF006060 7 476 6.4E-69 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_13455 39c98184804e00fba2d4bcf9730ec9a5 476 ProSitePatterns PS00218 Amino acid permeases signature. 53 84 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG62_13455 39c98184804e00fba2d4bcf9730ec9a5 476 Gene3D G3DSA:1.20.1740.10 19 476 1.6E-60 T 23-10-2018 CDG62_18145 21289fd77399c81a5ac88578cdffdc7c 305 SUPERFAMILY SSF56349 21 295 2.15E-58 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG62_18145 21289fd77399c81a5ac88578cdffdc7c 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 24 305 1.3E-107 T 23-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CDG62_18145 21289fd77399c81a5ac88578cdffdc7c 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 19 305 54.873 T 23-10-2018 IPR023009 Tyrosine recombinase XerC/XerD CDG62_18145 21289fd77399c81a5ac88578cdffdc7c 305 Pfam PF00589 Phage integrase family 122 290 4.5E-51 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG62_18145 21289fd77399c81a5ac88578cdffdc7c 305 Gene3D G3DSA:1.10.443.10 119 299 2.6E-69 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG62_18145 21289fd77399c81a5ac88578cdffdc7c 305 Gene3D G3DSA:1.10.150.130 18 107 2.0E-15 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG62_18145 21289fd77399c81a5ac88578cdffdc7c 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 22 99 9.1E-14 T 23-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDG62_18145 21289fd77399c81a5ac88578cdffdc7c 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 17 305 54.27 T 23-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.6E-86 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.6E-86 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.6E-86 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.6E-86 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.6E-86 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.6E-86 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.6E-86 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.6E-86 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.6E-86 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 Gene3D G3DSA:2.40.50.140 187 268 1.7E-29 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 Gene3D G3DSA:2.40.50.140 5 99 3.5E-17 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 Gene3D G3DSA:2.40.50.140 100 183 6.2E-9 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 SUPERFAMILY SSF50249 189 277 2.16E-28 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 SUPERFAMILY SSF50249 255 362 4.03E-27 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 Pfam PF00575 S1 RNA binding domain 361 434 9.1E-20 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 Pfam PF00575 S1 RNA binding domain 102 171 4.6E-14 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 Pfam PF00575 S1 RNA binding domain 18 86 3.6E-8 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 Pfam PF00575 S1 RNA binding domain 450 520 2.2E-13 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 Pfam PF00575 S1 RNA binding domain 189 260 1.5E-22 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 Gene3D G3DSA:2.40.50.140 445 528 4.3E-19 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 SUPERFAMILY SSF50249 103 184 8.58E-16 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 SMART SM00316 19 87 3.8E-8 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 SMART SM00316 275 347 1.9E-25 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 SMART SM00316 449 520 3.9E-19 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 SMART SM00316 362 434 7.9E-21 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 SMART SM00316 103 171 3.8E-11 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 SMART SM00316 190 260 4.1E-30 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 SUPERFAMILY SSF50249 343 440 4.72E-23 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 PIRSF PIRSF002111 1 534 5.0E-212 T 23-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 SUPERFAMILY SSF50249 2 112 5.15E-21 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 5.1E-210 T 23-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 Gene3D G3DSA:2.40.50.140 269 357 1.7E-28 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 Gene3D G3DSA:2.40.50.140 358 444 4.4E-25 T 23-10-2018 CDG62_10225 6ec2dacf2b0d77832cd7832870f1ed7d 558 SUPERFAMILY SSF50249 429 533 1.64E-20 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_03940 289e8f5ab127a4e99809ae04201150a8 228 Gene3D G3DSA:1.20.1080.10 1 228 3.6E-85 T 23-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CDG62_03940 289e8f5ab127a4e99809ae04201150a8 228 SUPERFAMILY SSF81338 2 224 7.72E-69 T 23-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CDG62_03940 289e8f5ab127a4e99809ae04201150a8 228 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 1.5E-61 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG62_03940 289e8f5ab127a4e99809ae04201150a8 228 ProSitePatterns PS00221 MIP family signature. 60 68 - T 23-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 CDG62_03940 289e8f5ab127a4e99809ae04201150a8 228 Pfam PF00230 Major intrinsic protein 2 221 1.3E-52 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG62_03940 289e8f5ab127a4e99809ae04201150a8 228 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 34.0 T 23-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 CDG62_03940 289e8f5ab127a4e99809ae04201150a8 228 PRINTS PR00783 Major intrinsic protein family signature 204 224 6.7E-54 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG62_03940 289e8f5ab127a4e99809ae04201150a8 228 PRINTS PR00783 Major intrinsic protein family signature 2 21 6.7E-54 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG62_03940 289e8f5ab127a4e99809ae04201150a8 228 PRINTS PR00783 Major intrinsic protein family signature 42 66 6.7E-54 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG62_03940 289e8f5ab127a4e99809ae04201150a8 228 PRINTS PR00783 Major intrinsic protein family signature 165 187 6.7E-54 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG62_03940 289e8f5ab127a4e99809ae04201150a8 228 PRINTS PR00783 Major intrinsic protein family signature 135 153 6.7E-54 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG62_03940 289e8f5ab127a4e99809ae04201150a8 228 PRINTS PR00783 Major intrinsic protein family signature 79 98 6.7E-54 T 23-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 CDG62_06480 7ef272fdcbe9dcd7335dea8b269200e0 335 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 63 78 - T 23-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06480 7ef272fdcbe9dcd7335dea8b269200e0 335 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 218 231 - T 23-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06480 7ef272fdcbe9dcd7335dea8b269200e0 335 Pfam PF00146 NADH dehydrogenase 24 329 5.7E-120 T 23-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06480 7ef272fdcbe9dcd7335dea8b269200e0 335 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 17 335 23.947 T 23-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_12915 e5fdabe86cc0b5369d7ef9e6ddc10459 293 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 24 283 4.7E-127 T 23-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 CDG62_12915 e5fdabe86cc0b5369d7ef9e6ddc10459 293 SUPERFAMILY SSF161098 23 277 6.93E-55 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_12915 e5fdabe86cc0b5369d7ef9e6ddc10459 293 Gene3D G3DSA:1.10.3720.10 25 286 1.3E-62 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_12915 e5fdabe86cc0b5369d7ef9e6ddc10459 293 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 22 281 1.3E-98 T 23-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CDG62_12915 e5fdabe86cc0b5369d7ef9e6ddc10459 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 279 2.8E-18 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_16315 a5187a447b3806f679766911a525b885 448 Gene3D G3DSA:3.40.50.620 20 238 4.3E-63 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_16315 a5187a447b3806f679766911a525b885 448 SUPERFAMILY SSF82829 241 321 7.72E-17 T 23-10-2018 CDG62_16315 a5187a447b3806f679766911a525b885 448 Pfam PF11734 TilS substrate C-terminal domain 372 421 8.1E-6 T 23-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDG62_16315 a5187a447b3806f679766911a525b885 448 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 372 414 1.8E-10 T 23-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDG62_16315 a5187a447b3806f679766911a525b885 448 SUPERFAMILY SSF52402 23 236 2.42E-51 T 23-10-2018 CDG62_16315 a5187a447b3806f679766911a525b885 448 Gene3D G3DSA:1.20.59.20 239 322 4.5E-13 T 23-10-2018 CDG62_16315 a5187a447b3806f679766911a525b885 448 SMART SM00977 372 446 6.1E-4 T 23-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDG62_16315 a5187a447b3806f679766911a525b885 448 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 21 311 21.78 T 23-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDG62_16315 a5187a447b3806f679766911a525b885 448 SUPERFAMILY SSF56037 335 440 4.97E-12 T 23-10-2018 CDG62_16315 a5187a447b3806f679766911a525b885 448 Pfam PF01171 PP-loop family 33 204 2.2E-47 T 23-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CDG62_16315 a5187a447b3806f679766911a525b885 448 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 33 208 7.0E-51 T 23-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDG62_16315 a5187a447b3806f679766911a525b885 448 Pfam PF09179 TilS substrate binding domain 252 318 1.9E-10 T 23-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CDG62_09295 ae0f426077416afb887ac80132e93aa5 449 Pfam PF02386 Cation transport protein 37 431 3.7E-56 T 23-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CDG62_09295 ae0f426077416afb887ac80132e93aa5 449 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 37 421 2.5E-100 T 23-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 CDG62_03210 a8c6c7cbec0c9f5bdc1faa6f5534e873 424 Gene3D G3DSA:3.40.50.300 1 152 5.5E-45 T 23-10-2018 CDG62_03210 a8c6c7cbec0c9f5bdc1faa6f5534e873 424 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 45 147 1.7E-16 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG62_03210 a8c6c7cbec0c9f5bdc1faa6f5534e873 424 Gene3D G3DSA:1.20.272.10 224 328 1.4E-45 T 23-10-2018 CDG62_03210 a8c6c7cbec0c9f5bdc1faa6f5534e873 424 SUPERFAMILY SSF48019 236 418 2.15E-72 T 23-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CDG62_03210 a8c6c7cbec0c9f5bdc1faa6f5534e873 424 Pfam PF12002 MgsA AAA+ ATPase C terminal 251 410 6.9E-67 T 23-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal CDG62_03210 a8c6c7cbec0c9f5bdc1faa6f5534e873 424 Gene3D G3DSA:1.10.3710.10 329 424 7.8E-31 T 23-10-2018 CDG62_03210 a8c6c7cbec0c9f5bdc1faa6f5534e873 424 Gene3D G3DSA:1.10.8.60 153 223 1.6E-6 T 23-10-2018 CDG62_03210 a8c6c7cbec0c9f5bdc1faa6f5534e873 424 Pfam PF16193 AAA C-terminal domain 180 250 1.8E-22 T 23-10-2018 IPR032423 AAA C-terminal domain CDG62_03210 a8c6c7cbec0c9f5bdc1faa6f5534e873 424 SMART SM00382 41 153 1.2E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_03210 a8c6c7cbec0c9f5bdc1faa6f5534e873 424 SUPERFAMILY SSF52540 4 219 7.43E-45 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17105 cbeb092837d3e43d11ae47ad155c3394 372 SMART SM00859 2 122 1.3E-25 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDG62_17105 cbeb092837d3e43d11ae47ad155c3394 372 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 121 7.5E-23 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDG62_17105 cbeb092837d3e43d11ae47ad155c3394 372 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 7.3E-55 T 23-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG62_17105 cbeb092837d3e43d11ae47ad155c3394 372 Gene3D G3DSA:3.40.50.720 1 138 9.7E-59 T 23-10-2018 CDG62_17105 cbeb092837d3e43d11ae47ad155c3394 372 PIRSF PIRSF000148 1 370 3.9E-66 T 23-10-2018 CDG62_17105 cbeb092837d3e43d11ae47ad155c3394 372 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 33.194 T 23-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG62_17105 cbeb092837d3e43d11ae47ad155c3394 372 SUPERFAMILY SSF51735 1 147 2.84E-53 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_17105 cbeb092837d3e43d11ae47ad155c3394 372 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 367 1.9E-192 T 23-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG62_17105 cbeb092837d3e43d11ae47ad155c3394 372 SUPERFAMILY SSF55347 134 354 2.65E-76 T 23-10-2018 CDG62_17105 cbeb092837d3e43d11ae47ad155c3394 372 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 23-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG62_17105 cbeb092837d3e43d11ae47ad155c3394 372 Gene3D G3DSA:3.30.360.10 139 350 5.5E-80 T 23-10-2018 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PIRSF PIRSF000238 1 521 2.1E-246 T 23-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 Gene3D G3DSA:3.40.30.80 1 199 3.3E-58 T 23-10-2018 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 Gene3D G3DSA:3.50.50.60 212 509 1.8E-106 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 Pfam PF13192 Thioredoxin domain 120 194 1.9E-8 T 23-10-2018 IPR012336 Thioredoxin-like fold CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 SUPERFAMILY SSF52833 1 100 3.47E-25 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 23-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 504 1.9E-44 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 SUPERFAMILY SSF51905 204 514 3.43E-49 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 Gene3D G3DSA:3.50.50.60 327 450 1.8E-106 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 479 497 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 3.9E-63 T 23-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 SUPERFAMILY SSF52833 103 195 1.36E-18 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 3.8E-225 T 23-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 3.6E-37 T 23-10-2018 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 3.6E-37 T 23-10-2018 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 491 3.6E-37 T 23-10-2018 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 3.6E-37 T 23-10-2018 CDG62_07725 8f7ea49e3afe0e095b1306bba05f3f04 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 3.6E-37 T 23-10-2018 CDG62_04995 53dc01828036b536614bb29a77d4c7c1 485 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 188 208 - T 23-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CDG62_04995 53dc01828036b536614bb29a77d4c7c1 485 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 34 469 7.7E-140 T 23-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CDG62_04995 53dc01828036b536614bb29a77d4c7c1 485 Gene3D G3DSA:3.80.30.20 182 417 1.5E-80 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDG62_04995 53dc01828036b536614bb29a77d4c7c1 485 Pfam PF01938 TRAM domain 416 478 6.5E-11 T 23-10-2018 IPR002792 TRAM domain CDG62_04995 53dc01828036b536614bb29a77d4c7c1 485 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 34 471 9.7E-175 T 23-10-2018 CDG62_04995 53dc01828036b536614bb29a77d4c7c1 485 Pfam PF04055 Radical SAM superfamily 188 362 1.3E-29 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG62_04995 53dc01828036b536614bb29a77d4c7c1 485 SMART SM00729 184 404 5.1E-59 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG62_04995 53dc01828036b536614bb29a77d4c7c1 485 Pfam PF00919 Uncharacterized protein family UPF0004 34 134 1.4E-28 T 23-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CDG62_04995 53dc01828036b536614bb29a77d4c7c1 485 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 33 478 68.318 T 23-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CDG62_04995 53dc01828036b536614bb29a77d4c7c1 485 SUPERFAMILY SSF102114 167 408 3.66E-61 T 23-10-2018 CDG62_04995 53dc01828036b536614bb29a77d4c7c1 485 Gene3D G3DSA:3.40.50.12160 33 166 2.2E-33 T 23-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily CDG62_03025 2fd87a479e3de65da372e39b5610353a 47 Pfam PF16951 Putative methionine and alanine importer, small subunit 1 34 2.0E-11 T 23-10-2018 IPR031596 Putative methionine and alanine importer, small subunit CDG62_02600 ad6ef6fa40f7180e6d201fd7c1d89951 1127 Gene3D G3DSA:1.10.10.160 297 396 4.0E-77 T 23-10-2018 IPR013986 DExx box DNA helicase domain superfamily CDG62_02600 ad6ef6fa40f7180e6d201fd7c1d89951 1127 Pfam PF13361 UvrD-like helicase C-terminal domain 486 644 4.2E-15 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDG62_02600 ad6ef6fa40f7180e6d201fd7c1d89951 1127 Gene3D G3DSA:1.10.486.10 590 753 6.0E-43 T 23-10-2018 CDG62_02600 ad6ef6fa40f7180e6d201fd7c1d89951 1127 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 474 7.3E-60 T 23-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CDG62_02600 ad6ef6fa40f7180e6d201fd7c1d89951 1127 Gene3D G3DSA:3.40.50.300 490 858 6.0E-43 T 23-10-2018 CDG62_02600 ad6ef6fa40f7180e6d201fd7c1d89951 1127 Pfam PF12705 PD-(D/E)XK nuclease superfamily 894 1115 3.8E-5 T 23-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CDG62_02600 ad6ef6fa40f7180e6d201fd7c1d89951 1127 Pfam PF06114 IrrE N-terminal-like domain 41 174 8.9E-17 T 23-10-2018 IPR010359 IrrE N-terminal-like domain CDG62_02600 ad6ef6fa40f7180e6d201fd7c1d89951 1127 Pfam PF13361 UvrD-like helicase C-terminal domain 743 839 7.8E-18 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDG62_02600 ad6ef6fa40f7180e6d201fd7c1d89951 1127 Gene3D G3DSA:3.40.50.300 197 475 4.0E-77 T 23-10-2018 CDG62_02600 ad6ef6fa40f7180e6d201fd7c1d89951 1127 SUPERFAMILY SSF52540 195 860 1.64E-106 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_03720 a6346069c1417f78fc2d0c6f14041879 571 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 68 489 1.0E-61 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDG62_03720 a6346069c1417f78fc2d0c6f14041879 571 Pfam PF00474 Sodium:solute symporter family 68 489 1.8E-111 T 23-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 CDG62_03720 a6346069c1417f78fc2d0c6f14041879 571 Gene3D G3DSA:1.20.1730.10 55 568 2.6E-60 T 23-10-2018 IPR038377 Sodium/glucose symporter superfamily CDG62_03720 a6346069c1417f78fc2d0c6f14041879 571 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 183 208 - T 23-10-2018 IPR018212 Sodium/solute symporter, conserved site CDG62_00635 265329fac2557796ad589940b0c80839 159 Gene3D G3DSA:3.40.50.850 1 158 2.3E-15 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_00635 265329fac2557796ad589940b0c80839 159 Pfam PF00857 Isochorismatase family 5 151 1.4E-11 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 CDG62_00635 265329fac2557796ad589940b0c80839 159 SUPERFAMILY SSF52499 1 149 1.11E-19 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_02810 265329fac2557796ad589940b0c80839 159 Gene3D G3DSA:3.40.50.850 1 158 2.3E-15 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_02810 265329fac2557796ad589940b0c80839 159 Pfam PF00857 Isochorismatase family 5 151 1.4E-11 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 CDG62_02810 265329fac2557796ad589940b0c80839 159 SUPERFAMILY SSF52499 1 149 1.11E-19 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_02255 5c16e83878d09a57402c64bcd9a0671d 325 Pfam PF01590 GAF domain 23 149 1.7E-8 T 23-10-2018 IPR003018 GAF domain GO:0005515 CDG62_02255 5c16e83878d09a57402c64bcd9a0671d 325 Gene3D G3DSA:3.30.70.270 163 323 4.3E-52 T 23-10-2018 CDG62_02255 5c16e83878d09a57402c64bcd9a0671d 325 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 321 1.2E-47 T 23-10-2018 IPR000160 GGDEF domain CDG62_02255 5c16e83878d09a57402c64bcd9a0671d 325 SUPERFAMILY SSF55073 171 322 1.88E-45 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_02255 5c16e83878d09a57402c64bcd9a0671d 325 Pfam PF00990 Diguanylate cyclase, GGDEF domain 167 318 5.5E-42 T 23-10-2018 IPR000160 GGDEF domain CDG62_02255 5c16e83878d09a57402c64bcd9a0671d 325 SMART SM00065 20 163 3.2E-4 T 23-10-2018 IPR003018 GAF domain GO:0005515 CDG62_02255 5c16e83878d09a57402c64bcd9a0671d 325 Gene3D G3DSA:3.30.450.40 4 162 1.6E-16 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG62_02255 5c16e83878d09a57402c64bcd9a0671d 325 SMART SM00267 155 322 1.8E-56 T 23-10-2018 IPR000160 GGDEF domain CDG62_02255 5c16e83878d09a57402c64bcd9a0671d 325 SUPERFAMILY SSF55781 22 163 5.05E-21 T 23-10-2018 CDG62_10600 81bdda2880a1718dfb0a6ab9ffb46cb5 112 PRINTS PR00355 Adrenodoxin signature 42 52 1.3E-8 T 23-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDG62_10600 81bdda2880a1718dfb0a6ab9ffb46cb5 112 PRINTS PR00355 Adrenodoxin signature 60 74 1.3E-8 T 23-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDG62_10600 81bdda2880a1718dfb0a6ab9ffb46cb5 112 PRINTS PR00355 Adrenodoxin signature 83 91 1.3E-8 T 23-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDG62_10600 81bdda2880a1718dfb0a6ab9ffb46cb5 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 23-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CDG62_10600 81bdda2880a1718dfb0a6ab9ffb46cb5 112 Gene3D G3DSA:3.10.20.30 1 112 1.4E-32 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG62_10600 81bdda2880a1718dfb0a6ab9ffb46cb5 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 2.2E-51 T 23-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 CDG62_10600 81bdda2880a1718dfb0a6ab9ffb46cb5 112 SUPERFAMILY SSF54292 6 108 2.63E-28 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG62_10600 81bdda2880a1718dfb0a6ab9ffb46cb5 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 90 5.4E-11 T 23-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CDG62_08250 b8665c4dde82c56ffef0d11d42b7226b 379 Pfam PF05134 Type II secretion system (T2SS), protein L 25 205 1.5E-11 T 23-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain CDG62_08250 b8665c4dde82c56ffef0d11d42b7226b 379 PIRSF PIRSF015761 14 379 1.0E-12 T 23-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 CDG62_08250 b8665c4dde82c56ffef0d11d42b7226b 379 Gene3D G3DSA:3.30.1360.100 297 379 1.6E-8 T 23-10-2018 CDG62_08250 b8665c4dde82c56ffef0d11d42b7226b 379 SUPERFAMILY SSF53067 5 135 5.7E-14 T 23-10-2018 CDG62_08250 b8665c4dde82c56ffef0d11d42b7226b 379 Gene3D G3DSA:3.30.420.380 5 167 1.9E-11 T 23-10-2018 CDG62_08250 b8665c4dde82c56ffef0d11d42b7226b 379 Pfam PF12693 GspL periplasmic domain 231 366 3.9E-9 T 23-10-2018 IPR025691 GspL periplasmic domain CDG62_12940 6fe2ece8a713dde554c9a3c34e8f4cf3 273 Gene3D G3DSA:1.10.166.10 1 70 2.4E-29 T 23-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 CDG62_12940 6fe2ece8a713dde554c9a3c34e8f4cf3 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 6.5E-26 T 23-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CDG62_12940 6fe2ece8a713dde554c9a3c34e8f4cf3 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0014 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_12940 6fe2ece8a713dde554c9a3c34e8f4cf3 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 57.153 T 23-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CDG62_12940 6fe2ece8a713dde554c9a3c34e8f4cf3 273 Gene3D G3DSA:2.160.10.10 87 257 2.8E-55 T 23-10-2018 CDG62_12940 6fe2ece8a713dde554c9a3c34e8f4cf3 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 271 1.9E-145 T 23-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CDG62_12940 6fe2ece8a713dde554c9a3c34e8f4cf3 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 1.1E-12 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_12940 6fe2ece8a713dde554c9a3c34e8f4cf3 273 SUPERFAMILY SSF51161 2 256 6.38E-73 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG62_12940 6fe2ece8a713dde554c9a3c34e8f4cf3 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 23-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 Hamap MF_01498 DNA repair protein RadA [radA]. 21 456 42.729 T 23-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 Gene3D G3DSA:3.40.50.300 68 286 1.2E-39 T 23-10-2018 CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 431 1.1E-6 T 23-10-2018 CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 Gene3D G3DSA:3.30.230.10 312 458 1.1E-17 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 8.8E-193 T 23-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 Pfam PF06745 KaiC 76 151 2.4E-11 T 23-10-2018 IPR014774 KaiC-like domain CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 PRINTS PR01874 DNA repair protein radA signature 10 34 4.9E-92 T 23-10-2018 CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 PRINTS PR01874 DNA repair protein radA signature 176 200 4.9E-92 T 23-10-2018 CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 PRINTS PR01874 DNA repair protein radA signature 126 143 4.9E-92 T 23-10-2018 CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 PRINTS PR01874 DNA repair protein radA signature 84 112 4.9E-92 T 23-10-2018 CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 PRINTS PR01874 DNA repair protein radA signature 250 276 4.9E-92 T 23-10-2018 CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 PRINTS PR01874 DNA repair protein radA signature 323 346 4.9E-92 T 23-10-2018 CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 PRINTS PR01874 DNA repair protein radA signature 215 243 4.9E-92 T 23-10-2018 CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 SMART SM00382 92 247 1.7E-6 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 SUPERFAMILY SSF54211 257 455 5.69E-39 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_07395 f2c0825011cc2ac558a302c68ad2c122 463 SUPERFAMILY SSF52540 71 288 3.2E-47 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_16845 6c28540b124b87236a498af3d5af54c0 201 Pfam PF00574 Clp protease 20 199 3.0E-88 T 23-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CDG62_16845 6c28540b124b87236a498af3d5af54c0 201 Gene3D G3DSA:3.90.226.10 3 201 4.2E-83 T 23-10-2018 CDG62_16845 6c28540b124b87236a498af3d5af54c0 201 SUPERFAMILY SSF52096 18 199 2.49E-75 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_16845 6c28540b124b87236a498af3d5af54c0 201 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 1.6E-51 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDG62_16845 6c28540b124b87236a498af3d5af54c0 201 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 1.6E-51 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDG62_16845 6c28540b124b87236a498af3d5af54c0 201 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 1.6E-51 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDG62_16845 6c28540b124b87236a498af3d5af54c0 201 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 1.6E-51 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDG62_16845 6c28540b124b87236a498af3d5af54c0 201 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 1.6E-51 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDG62_16845 6c28540b124b87236a498af3d5af54c0 201 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 199 6.6E-106 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDG62_16845 6c28540b124b87236a498af3d5af54c0 201 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 23-10-2018 IPR018215 ClpP, Ser active site CDG62_16845 6c28540b124b87236a498af3d5af54c0 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 44.003 T 23-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CDG62_16845 6c28540b124b87236a498af3d5af54c0 201 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 23-10-2018 IPR033135 ClpP, histidine active site CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 Gene3D G3DSA:3.30.565.10 293 450 6.8E-38 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 SUPERFAMILY SSF55874 279 445 1.44E-43 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 289 1.3E-18 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 Gene3D G3DSA:3.30.450.20 107 221 8.2E-8 T 23-10-2018 CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 Pfam PF13188 PAS domain 118 164 6.1E-6 T 23-10-2018 IPR000014 PAS domain CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 Pfam PF11808 Domain of unknown function (DUF3329) 28 106 1.6E-13 T 23-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 446 3.0E-23 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 SUPERFAMILY SSF47384 213 291 2.16E-20 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 116 443 1.8E-124 T 23-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 Gene3D G3DSA:1.10.287.130 222 290 3.8E-23 T 23-10-2018 CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 SMART SM00388 224 290 6.3E-20 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 SMART SM00387 335 447 9.3E-35 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 1.0E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.0E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 1.0E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_03320 87d0354d0e8069185d35f6f0058e40c3 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 1.0E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_13055 35d5698ea1a1705ead52ee5e7fcf4b13 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 9 227 38.572 T 23-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 CDG62_13055 35d5698ea1a1705ead52ee5e7fcf4b13 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 83 205 5.0E-38 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CDG62_13055 35d5698ea1a1705ead52ee5e7fcf4b13 232 TIGRFAM TIGR02796 tolQ: protein TolQ 11 222 6.7E-81 T 23-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 CDG62_04200 b7d6897960adb75b25570e0e2a406062 177 Hamap MF_00109 Shikimate kinase [aroK]. 9 175 29.822 T 23-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CDG62_04200 b7d6897960adb75b25570e0e2a406062 177 PRINTS PR01100 Shikimate kinase family signature 36 49 6.6E-26 T 23-10-2018 CDG62_04200 b7d6897960adb75b25570e0e2a406062 177 PRINTS PR01100 Shikimate kinase family signature 82 91 6.6E-26 T 23-10-2018 CDG62_04200 b7d6897960adb75b25570e0e2a406062 177 PRINTS PR01100 Shikimate kinase family signature 12 27 6.6E-26 T 23-10-2018 CDG62_04200 b7d6897960adb75b25570e0e2a406062 177 PRINTS PR01100 Shikimate kinase family signature 64 72 6.6E-26 T 23-10-2018 CDG62_04200 b7d6897960adb75b25570e0e2a406062 177 PRINTS PR01100 Shikimate kinase family signature 103 120 6.6E-26 T 23-10-2018 CDG62_04200 b7d6897960adb75b25570e0e2a406062 177 SUPERFAMILY SSF52540 11 174 1.56E-31 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_04200 b7d6897960adb75b25570e0e2a406062 177 Pfam PF01202 Shikimate kinase 18 173 1.3E-52 T 23-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CDG62_04200 b7d6897960adb75b25570e0e2a406062 177 ProSitePatterns PS01128 Shikimate kinase signature. 65 90 - T 23-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CDG62_04200 b7d6897960adb75b25570e0e2a406062 177 Gene3D G3DSA:3.40.50.300 2 176 1.4E-58 T 23-10-2018 CDG62_14375 7e69f28fae76244ef92879e3484c167b 724 Pfam PF12805 FUSC-like inner membrane protein yccS 68 349 1.1E-89 T 23-10-2018 IPR032692 Integral membrane protein YccS, N-terminal CDG62_14375 7e69f28fae76244ef92879e3484c167b 724 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 12 708 1.0E-249 T 23-10-2018 IPR010019 Integral membrane protein, YccS CDG62_14375 7e69f28fae76244ef92879e3484c167b 724 SUPERFAMILY SSF103473 386 532 3.79E-5 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_14375 7e69f28fae76244ef92879e3484c167b 724 Pfam PF13515 Fusaric acid resistance protein-like 410 530 2.4E-21 T 23-10-2018 CDG62_14375 7e69f28fae76244ef92879e3484c167b 724 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 708 7.3E-229 T 23-10-2018 IPR010020 Integral membrane protein, YccS/YhfK CDG62_04630 0158bc430451487582fe0cbc9a702398 857 Pfam PF01553 Acyltransferase 300 441 6.3E-21 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_04630 0158bc430451487582fe0cbc9a702398 857 PIRSF PIRSF500064 15 839 5.5E-227 T 23-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 CDG62_04630 0158bc430451487582fe0cbc9a702398 857 SUPERFAMILY SSF69593 264 500 2.62E-24 T 23-10-2018 CDG62_04630 0158bc430451487582fe0cbc9a702398 857 SMART SM00563 317 444 2.3E-25 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_04630 0158bc430451487582fe0cbc9a702398 857 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 37 823 4.6E-297 T 23-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 CDG62_04630 0158bc430451487582fe0cbc9a702398 857 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 23 832 23.379 T 23-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 CDG62_04630 0158bc430451487582fe0cbc9a702398 857 PIRSF PIRSF000437 34 839 3.0E-221 T 23-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 CDG62_10175 eca14fdab769cf29fbd6fbcc0081ed7f 189 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 8 186 1.4E-13 T 23-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CDG62_10175 eca14fdab769cf29fbd6fbcc0081ed7f 189 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 31 2.2E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_10175 eca14fdab769cf29fbd6fbcc0081ed7f 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 2.4E-7 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_10175 eca14fdab769cf29fbd6fbcc0081ed7f 189 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_10175 eca14fdab769cf29fbd6fbcc0081ed7f 189 SUPERFAMILY SSF54523 12 96 1.96E-10 T 23-10-2018 CDG62_10175 eca14fdab769cf29fbd6fbcc0081ed7f 189 Gene3D G3DSA:3.30.700.10 12 71 1.7E-7 T 23-10-2018 CDG62_10175 eca14fdab769cf29fbd6fbcc0081ed7f 189 PRINTS PR00885 Bacterial general secretion pathway protein H signature 22 36 6.4E-7 T 23-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CDG62_10175 eca14fdab769cf29fbd6fbcc0081ed7f 189 PRINTS PR00885 Bacterial general secretion pathway protein H signature 150 165 6.4E-7 T 23-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CDG62_10175 eca14fdab769cf29fbd6fbcc0081ed7f 189 PRINTS PR00885 Bacterial general secretion pathway protein H signature 7 21 6.4E-7 T 23-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CDG62_07525 a051c797bc6f97a3a320426ac1d8d22b 291 Pfam PF00889 Elongation factor TS 71 269 1.0E-60 T 23-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 CDG62_07525 a051c797bc6f97a3a320426ac1d8d22b 291 SUPERFAMILY SSF46934 4 54 5.11E-18 T 23-10-2018 IPR009060 UBA-like superfamily GO:0005515 CDG62_07525 a051c797bc6f97a3a320426ac1d8d22b 291 Gene3D G3DSA:3.30.479.20 57 148 1.0E-25 T 23-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CDG62_07525 a051c797bc6f97a3a320426ac1d8d22b 291 Gene3D G3DSA:3.30.479.20 153 268 8.5E-36 T 23-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CDG62_07525 a051c797bc6f97a3a320426ac1d8d22b 291 Gene3D G3DSA:1.10.286.20 188 234 8.5E-36 T 23-10-2018 CDG62_07525 a051c797bc6f97a3a320426ac1d8d22b 291 Gene3D G3DSA:1.10.8.10 1 56 9.5E-25 T 23-10-2018 CDG62_07525 a051c797bc6f97a3a320426ac1d8d22b 291 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 286 4.9E-94 T 23-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG62_07525 a051c797bc6f97a3a320426ac1d8d22b 291 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 23-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG62_07525 a051c797bc6f97a3a320426ac1d8d22b 291 SUPERFAMILY SSF54713 57 269 3.6E-43 T 23-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 CDG62_07525 a051c797bc6f97a3a320426ac1d8d22b 291 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 23-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG62_07525 a051c797bc6f97a3a320426ac1d8d22b 291 Hamap MF_00050 Elongation factor Ts [tsf]. 1 288 73.021 T 23-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG62_19145 2e6fb8ecd3dc9c71d91ce23a4f683a9c 373 SUPERFAMILY SSF56059 97 295 3.36E-63 T 23-10-2018 CDG62_19145 2e6fb8ecd3dc9c71d91ce23a4f683a9c 373 Gene3D G3DSA:3.30.470.20 173 371 1.6E-74 T 23-10-2018 CDG62_19145 2e6fb8ecd3dc9c71d91ce23a4f683a9c 373 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 4 347 39.275 T 23-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CDG62_19145 2e6fb8ecd3dc9c71d91ce23a4f683a9c 373 Gene3D G3DSA:3.30.1490.20 102 172 8.1E-26 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDG62_19145 2e6fb8ecd3dc9c71d91ce23a4f683a9c 373 Gene3D G3DSA:3.40.50.20 1 101 4.2E-26 T 23-10-2018 CDG62_19145 2e6fb8ecd3dc9c71d91ce23a4f683a9c 373 SUPERFAMILY SSF52440 3 96 6.33E-17 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG62_19145 2e6fb8ecd3dc9c71d91ce23a4f683a9c 373 Pfam PF02222 ATP-grasp domain 106 275 3.0E-56 T 23-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CDG62_19145 2e6fb8ecd3dc9c71d91ce23a4f683a9c 373 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 351 5.5E-113 T 23-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CDG62_19145 2e6fb8ecd3dc9c71d91ce23a4f683a9c 373 SUPERFAMILY SSF51246 299 364 6.83E-17 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDG62_12695 fdba6a9669e4b079116051456ece9558 731 SUPERFAMILY SSF56935 57 731 5.19E-111 T 23-10-2018 CDG62_12695 fdba6a9669e4b079116051456ece9558 731 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 731 9.0E-89 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDG62_12695 fdba6a9669e4b079116051456ece9558 731 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 714 731 - T 23-10-2018 IPR010917 TonB-dependent receptor, conserved site CDG62_12695 fdba6a9669e4b079116051456ece9558 731 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 181 5.8E-20 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_12695 fdba6a9669e4b079116051456ece9558 731 Gene3D G3DSA:2.40.170.20 194 731 1.3E-111 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_12695 fdba6a9669e4b079116051456ece9558 731 Pfam PF00593 TonB dependent receptor 272 729 5.4E-50 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_12695 fdba6a9669e4b079116051456ece9558 731 Gene3D G3DSA:2.170.130.10 65 190 3.0E-29 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_06595 170a3dd3b9cb52e842f7631f8c28f056 413 Gene3D G3DSA:1.10.287.470 105 178 3.3E-102 T 23-10-2018 CDG62_06595 170a3dd3b9cb52e842f7631f8c28f056 413 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 298 3.3E-16 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG62_06595 170a3dd3b9cb52e842f7631f8c28f056 413 Gene3D G3DSA:2.40.50.100 70 214 3.3E-102 T 23-10-2018 CDG62_06595 170a3dd3b9cb52e842f7631f8c28f056 413 Gene3D G3DSA:2.40.420.20 309 378 3.3E-102 T 23-10-2018 CDG62_06595 170a3dd3b9cb52e842f7631f8c28f056 413 Gene3D G3DSA:2.40.30.170 57 308 3.3E-102 T 23-10-2018 CDG62_06595 170a3dd3b9cb52e842f7631f8c28f056 413 Pfam PF00529 HlyD membrane-fusion protein of T1SS 299 365 1.3E-9 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG62_06595 170a3dd3b9cb52e842f7631f8c28f056 413 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 380 3.4E-79 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG62_06595 170a3dd3b9cb52e842f7631f8c28f056 413 SUPERFAMILY SSF111369 59 305 5.49E-79 T 23-10-2018 CDG62_13620 fb21695228ae32ee016312827967314e 91 SUPERFAMILY SSF54909 13 74 5.37E-9 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_13620 fb21695228ae32ee016312827967314e 91 Pfam PF03992 Antibiotic biosynthesis monooxygenase 19 68 5.0E-5 T 23-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CDG62_13620 fb21695228ae32ee016312827967314e 91 Gene3D G3DSA:3.30.70.100 9 89 3.1E-7 T 23-10-2018 CDG62_06115 b7eaa2743c6ddc6d38aae2264ef10e62 128 SUPERFAMILY SSF89946 6 120 3.14E-31 T 23-10-2018 IPR036701 RraB-like superfamily CDG62_06115 b7eaa2743c6ddc6d38aae2264ef10e62 128 Gene3D G3DSA:3.30.70.970 5 124 2.1E-10 T 23-10-2018 IPR036701 RraB-like superfamily CDG62_06115 b7eaa2743c6ddc6d38aae2264ef10e62 128 Pfam PF06877 Regulator of ribonuclease activity B 11 110 1.1E-27 T 23-10-2018 IPR009671 Regulator of ribonuclease activity B domain CDG62_18535 67a89f47b53cd4dfb7894659b9b9f7ed 260 Gene3D G3DSA:3.40.50.300 5 241 1.4E-53 T 23-10-2018 CDG62_18535 67a89f47b53cd4dfb7894659b9b9f7ed 260 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_18535 67a89f47b53cd4dfb7894659b9b9f7ed 260 Pfam PF00005 ABC transporter 27 154 8.3E-26 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_18535 67a89f47b53cd4dfb7894659b9b9f7ed 260 SMART SM00382 36 203 2.8E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_18535 67a89f47b53cd4dfb7894659b9b9f7ed 260 SUPERFAMILY SSF52540 8 222 5.33E-51 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_18820 59fbfd94b01cdf852d49d90d65db3190 151 Pfam PF01029 NusB family 13 137 1.1E-29 T 23-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CDG62_18820 59fbfd94b01cdf852d49d90d65db3190 151 Gene3D G3DSA:1.10.940.10 6 145 1.5E-44 T 23-10-2018 IPR035926 NusB-like superfamily CDG62_18820 59fbfd94b01cdf852d49d90d65db3190 151 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 10 141 21.039 T 23-10-2018 IPR011605 NusB antitermination factor GO:0006353 CDG62_18820 59fbfd94b01cdf852d49d90d65db3190 151 SUPERFAMILY SSF48013 10 140 2.09E-37 T 23-10-2018 IPR035926 NusB-like superfamily CDG62_18820 59fbfd94b01cdf852d49d90d65db3190 151 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 12 139 5.1E-39 T 23-10-2018 IPR011605 NusB antitermination factor GO:0006353 CDG62_04790 a03be8abd349848365b5f7c891a608a9 146 SUPERFAMILY SSF52080 6 145 3.92E-41 T 23-10-2018 IPR036227 Ribosomal L18e/L15P superfamily CDG62_04790 a03be8abd349848365b5f7c891a608a9 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 145 1.2E-44 T 23-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04790 a03be8abd349848365b5f7c891a608a9 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 145 2.2E-26 T 23-10-2018 IPR021131 Ribosomal protein L18e/L15P CDG62_04790 a03be8abd349848365b5f7c891a608a9 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 111 141 - T 23-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04790 a03be8abd349848365b5f7c891a608a9 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 146 18.134 T 23-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CDG62_04790 a03be8abd349848365b5f7c891a608a9 146 Gene3D G3DSA:3.100.10.10 73 146 1.4E-12 T 23-10-2018 CDG62_10140 44888d7bfe74d9a4a35c95762fbb9806 575 Pfam PF00005 ABC transporter 351 501 3.5E-35 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_10140 44888d7bfe74d9a4a35c95762fbb9806 575 SUPERFAMILY SSF52540 328 570 1.57E-94 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10140 44888d7bfe74d9a4a35c95762fbb9806 575 SUPERFAMILY SSF90123 10 320 6.67E-67 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG62_10140 44888d7bfe74d9a4a35c95762fbb9806 575 SMART SM00382 360 547 7.0E-18 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_10140 44888d7bfe74d9a4a35c95762fbb9806 575 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_10140 44888d7bfe74d9a4a35c95762fbb9806 575 Pfam PF00664 ABC transporter transmembrane region 23 291 1.3E-46 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDG62_10140 44888d7bfe74d9a4a35c95762fbb9806 575 Gene3D G3DSA:1.20.1560.10 1 323 4.3E-72 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG62_10140 44888d7bfe74d9a4a35c95762fbb9806 575 Gene3D G3DSA:3.40.50.300 327 575 7.5E-94 T 23-10-2018 CDG62_10140 44888d7bfe74d9a4a35c95762fbb9806 575 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 8 574 3.2E-204 T 23-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 CDG62_18355 cb36415abedd151b31307e4c794b26fb 353 Gene3D G3DSA:3.30.70.270 4 163 6.9E-63 T 23-10-2018 CDG62_18355 cb36415abedd151b31307e4c794b26fb 353 Gene3D G3DSA:3.30.1490.100 239 344 6.0E-18 T 23-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG62_18355 cb36415abedd151b31307e4c794b26fb 353 SUPERFAMILY SSF56672 1 233 4.36E-91 T 23-10-2018 CDG62_18355 cb36415abedd151b31307e4c794b26fb 353 Gene3D G3DSA:1.10.150.20 165 228 2.1E-19 T 23-10-2018 CDG62_18355 cb36415abedd151b31307e4c794b26fb 353 Hamap MF_01113 DNA polymerase IV [dinB]. 1 350 36.835 T 23-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CDG62_18355 cb36415abedd151b31307e4c794b26fb 353 SUPERFAMILY SSF100879 237 336 7.26E-20 T 23-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG62_18355 cb36415abedd151b31307e4c794b26fb 353 Pfam PF11799 impB/mucB/samB family C-terminal domain 232 340 6.5E-13 T 23-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG62_18355 cb36415abedd151b31307e4c794b26fb 353 Pfam PF11798 IMS family HHH motif 165 195 2.7E-8 T 23-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CDG62_18355 cb36415abedd151b31307e4c794b26fb 353 Gene3D G3DSA:2.30.40.20 21 72 6.9E-63 T 23-10-2018 CDG62_18355 cb36415abedd151b31307e4c794b26fb 353 Pfam PF00817 impB/mucB/samB family 7 153 5.2E-52 T 23-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG62_05140 34ab93aa27323ab3ba5798fa0320317c 100 Gene3D G3DSA:3.30.70.1060 1 97 9.5E-30 T 23-10-2018 CDG62_05140 34ab93aa27323ab3ba5798fa0320317c 100 SUPERFAMILY SSF54909 1 96 2.68E-24 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_05140 34ab93aa27323ab3ba5798fa0320317c 100 Pfam PF03795 YCII-related domain 3 94 5.1E-19 T 23-10-2018 IPR005545 YCII-related CDG62_18885 268f4402b4804e57d09377f0f232e440 201 Pfam PF02397 Bacterial sugar transferase 2 176 6.6E-64 T 23-10-2018 IPR003362 Bacterial sugar transferase CDG62_09195 2d329662d39555ff1f1c9438d4f81883 378 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 33 378 2.5E-115 T 23-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_09195 2d329662d39555ff1f1c9438d4f81883 378 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 27 378 24.672 T 23-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_09195 2d329662d39555ff1f1c9438d4f81883 378 Pfam PF01098 Cell cycle protein 37 377 1.8E-97 T 23-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_13695 7f01e116b5f3d9118e343a7bf4ce6f17 414 SUPERFAMILY SSF51905 10 397 1.06E-52 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_13695 7f01e116b5f3d9118e343a7bf4ce6f17 414 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 308 321 - T 23-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CDG62_13695 7f01e116b5f3d9118e343a7bf4ce6f17 414 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 10 402 1.3E-104 T 23-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CDG62_13695 7f01e116b5f3d9118e343a7bf4ce6f17 414 Gene3D G3DSA:3.30.9.50 84 283 1.6E-91 T 23-10-2018 CDG62_13695 7f01e116b5f3d9118e343a7bf4ce6f17 414 Pfam PF01494 FAD binding domain 10 357 5.8E-34 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 CDG62_13695 7f01e116b5f3d9118e343a7bf4ce6f17 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 309 325 8.8E-20 T 23-10-2018 CDG62_13695 7f01e116b5f3d9118e343a7bf4ce6f17 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 309 8.8E-20 T 23-10-2018 CDG62_13695 7f01e116b5f3d9118e343a7bf4ce6f17 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 8.8E-20 T 23-10-2018 CDG62_13695 7f01e116b5f3d9118e343a7bf4ce6f17 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 163 178 8.8E-20 T 23-10-2018 CDG62_13695 7f01e116b5f3d9118e343a7bf4ce6f17 414 Gene3D G3DSA:3.50.50.60 10 351 1.6E-91 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_09225 8cdae24e57d854d76568971a87bca0e0 208 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 4 195 7.6E-72 T 23-10-2018 IPR017757 Transcriptional repressor BetI CDG62_09225 8cdae24e57d854d76568971a87bca0e0 208 Gene3D G3DSA:1.10.357.10 1 205 5.6E-40 T 23-10-2018 CDG62_09225 8cdae24e57d854d76568971a87bca0e0 208 SUPERFAMILY SSF46689 3 77 4.98E-17 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_09225 8cdae24e57d854d76568971a87bca0e0 208 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 86 195 1.3E-30 T 23-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal CDG62_09225 8cdae24e57d854d76568971a87bca0e0 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 23-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDG62_09225 8cdae24e57d854d76568971a87bca0e0 208 SUPERFAMILY SSF48498 84 197 6.52E-18 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG62_09225 8cdae24e57d854d76568971a87bca0e0 208 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 203 84.092 T 23-10-2018 IPR017757 Transcriptional repressor BetI CDG62_09225 8cdae24e57d854d76568971a87bca0e0 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 8.9E-12 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_10360 5a4d2157c058192dc0203384e04635d2 328 ProSitePatterns PS01054 Transaldolase signature 1. 32 40 - T 23-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CDG62_10360 5a4d2157c058192dc0203384e04635d2 328 ProSitePatterns PS00958 Transaldolase active site. 130 147 - T 23-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CDG62_10360 5a4d2157c058192dc0203384e04635d2 328 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 15 313 4.4E-89 T 23-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CDG62_10360 5a4d2157c058192dc0203384e04635d2 328 SUPERFAMILY SSF51569 4 318 2.2E-101 T 23-10-2018 CDG62_10360 5a4d2157c058192dc0203384e04635d2 328 TIGRFAM TIGR00874 talAB: transaldolase 5 318 2.2E-125 T 23-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 CDG62_10360 5a4d2157c058192dc0203384e04635d2 328 Gene3D G3DSA:3.20.20.70 1 321 6.7E-122 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_06645 6bb320a1bfe86b4f071f005670901639 423 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 399 7.2E-41 T 23-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_06645 6bb320a1bfe86b4f071f005670901639 423 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 41.12 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG62_06645 6bb320a1bfe86b4f071f005670901639 423 PIRSF PIRSF001529 1 423 2.0E-183 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG62_06645 6bb320a1bfe86b4f071f005670901639 423 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 8.9E-33 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG62_06645 6bb320a1bfe86b4f071f005670901639 423 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 8.9E-33 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG62_06645 6bb320a1bfe86b4f071f005670901639 423 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 8.9E-33 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG62_06645 6bb320a1bfe86b4f071f005670901639 423 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 8.9E-33 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG62_06645 6bb320a1bfe86b4f071f005670901639 423 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 8.9E-33 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG62_06645 6bb320a1bfe86b4f071f005670901639 423 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 1.5E-172 T 23-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CDG62_06645 6bb320a1bfe86b4f071f005670901639 423 Gene3D G3DSA:3.30.930.10 105 423 1.3E-117 T 23-10-2018 CDG62_06645 6bb320a1bfe86b4f071f005670901639 423 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 7.1E-30 T 23-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 CDG62_06645 6bb320a1bfe86b4f071f005670901639 423 SUPERFAMILY SSF55681 116 417 3.87E-104 T 23-10-2018 CDG62_06645 6bb320a1bfe86b4f071f005670901639 423 SUPERFAMILY SSF46589 1 112 2.77E-29 T 23-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CDG62_06645 6bb320a1bfe86b4f071f005670901639 423 Gene3D G3DSA:1.10.287.40 1 104 1.9E-22 T 23-10-2018 CDG62_15615 9c741646b921b4e4b93361ec0f4a375f 182 Gene3D G3DSA:2.40.128.20 9 182 1.0E-47 T 23-10-2018 IPR012674 Calycin CDG62_15615 9c741646b921b4e4b93361ec0f4a375f 182 SUPERFAMILY SSF50814 28 182 1.78E-41 T 23-10-2018 IPR012674 Calycin CDG62_15615 9c741646b921b4e4b93361ec0f4a375f 182 Pfam PF08212 Lipocalin-like domain 36 181 1.2E-49 T 23-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CDG62_15615 9c741646b921b4e4b93361ec0f4a375f 182 ProSitePatterns PS00213 Lipocalin signature. 37 48 - T 23-10-2018 IPR022272 Lipocalin family conserved site CDG62_15615 9c741646b921b4e4b93361ec0f4a375f 182 PRINTS PR01171 Bacterial lipocalin signature 129 137 8.3E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG62_15615 9c741646b921b4e4b93361ec0f4a375f 182 PRINTS PR01171 Bacterial lipocalin signature 171 181 8.3E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG62_15615 9c741646b921b4e4b93361ec0f4a375f 182 PRINTS PR01171 Bacterial lipocalin signature 36 50 8.3E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG62_15615 9c741646b921b4e4b93361ec0f4a375f 182 PRINTS PR01171 Bacterial lipocalin signature 144 155 8.3E-9 T 23-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 CDG62_15615 9c741646b921b4e4b93361ec0f4a375f 182 PIRSF PIRSF036893 2 182 8.4E-57 T 23-10-2018 IPR022271 Lipocalin, ApoD type CDG62_03630 eeed8212f3b0e03dd00314c33f940d71 99 SMART SM00418 5 93 3.6E-11 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_03630 eeed8212f3b0e03dd00314c33f940d71 99 Gene3D G3DSA:1.10.10.10 1 98 7.7E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_03630 eeed8212f3b0e03dd00314c33f940d71 99 Pfam PF12840 Helix-turn-helix domain 4 74 7.2E-16 T 23-10-2018 CDG62_03630 eeed8212f3b0e03dd00314c33f940d71 99 SUPERFAMILY SSF46785 2 96 3.17E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_18305 b678c73ac0a7f656944b0b2e80be8dc5 739 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 631 0.9 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG62_18305 b678c73ac0a7f656944b0b2e80be8dc5 739 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 687 7.2E-7 T 23-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CDG62_18305 b678c73ac0a7f656944b0b2e80be8dc5 739 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 735 0.0 T 23-10-2018 CDG62_18305 b678c73ac0a7f656944b0b2e80be8dc5 739 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 4.3E-135 T 23-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG62_18305 b678c73ac0a7f656944b0b2e80be8dc5 739 Gene3D G3DSA:1.10.268.10 370 455 1.2E-176 T 23-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDG62_18305 b678c73ac0a7f656944b0b2e80be8dc5 739 Gene3D G3DSA:3.30.1360.40 239 332 1.2E-176 T 23-10-2018 CDG62_18305 b678c73ac0a7f656944b0b2e80be8dc5 739 Gene3D G3DSA:2.120.10.90 501 736 2.5E-14 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDG62_18305 b678c73ac0a7f656944b0b2e80be8dc5 739 SUPERFAMILY SSF56719 32 484 5.49E-155 T 23-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CDG62_18305 b678c73ac0a7f656944b0b2e80be8dc5 739 Gene3D G3DSA:3.90.199.10 33 484 1.2E-176 T 23-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CDG62_18305 b678c73ac0a7f656944b0b2e80be8dc5 739 SUPERFAMILY SSF101904 499 737 5.36E-46 T 23-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CDG62_18305 b678c73ac0a7f656944b0b2e80be8dc5 739 SMART SM00434 12 462 2.0E-219 T 23-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CDG62_18305 b678c73ac0a7f656944b0b2e80be8dc5 739 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 736 32.876 T 23-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CDG62_15750 809c13d6c7bf15038bde2b8aa7fe39b7 165 SUPERFAMILY SSF54637 26 163 1.64E-18 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_15750 809c13d6c7bf15038bde2b8aa7fe39b7 165 Gene3D G3DSA:3.10.129.10 9 165 2.0E-40 T 23-10-2018 CDG62_15750 809c13d6c7bf15038bde2b8aa7fe39b7 165 Pfam PF03061 Thioesterase superfamily 68 156 1.1E-12 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDG62_15750 809c13d6c7bf15038bde2b8aa7fe39b7 165 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 44 160 4.1E-11 T 23-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CDG62_18810 dab0067ade12e3e8eb0d75cc6b5d40c9 371 Pfam PF00925 GTP cyclohydrolase II 209 365 1.8E-28 T 23-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG62_18810 dab0067ade12e3e8eb0d75cc6b5d40c9 371 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 3.6E-73 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_18810 dab0067ade12e3e8eb0d75cc6b5d40c9 371 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 5.6E-81 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_18810 dab0067ade12e3e8eb0d75cc6b5d40c9 371 SUPERFAMILY SSF142695 205 366 3.79E-35 T 23-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 CDG62_18810 dab0067ade12e3e8eb0d75cc6b5d40c9 371 SUPERFAMILY SSF55821 2 202 1.17E-83 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDG62_18810 dab0067ade12e3e8eb0d75cc6b5d40c9 371 Gene3D G3DSA:3.90.870.10 1 206 1.7E-84 T 23-10-2018 CDG62_18810 dab0067ade12e3e8eb0d75cc6b5d40c9 371 PIRSF PIRSF001259 2 371 6.0E-111 T 23-10-2018 CDG62_18810 dab0067ade12e3e8eb0d75cc6b5d40c9 371 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.017 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_06915 3e60ebd450ffad40a10a73902ab4d07a 132 Gene3D G3DSA:1.20.1300.10 2 131 1.0E-33 T 23-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_06915 3e60ebd450ffad40a10a73902ab4d07a 132 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 125 1.1E-23 T 23-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_06915 3e60ebd450ffad40a10a73902ab4d07a 132 SUPERFAMILY SSF81343 7 130 1.8E-25 T 23-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_06915 3e60ebd450ffad40a10a73902ab4d07a 132 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 8 129 3.9E-31 T 23-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_06915 3e60ebd450ffad40a10a73902ab4d07a 132 PIRSF PIRSF000178 2 131 5.5E-20 T 23-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_00960 eb37b41fef56b18cd3192bb91cc6f971 130 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 3 129 5.3E-65 T 23-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 CDG62_00960 eb37b41fef56b18cd3192bb91cc6f971 130 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_00960 eb37b41fef56b18cd3192bb91cc6f971 130 SUPERFAMILY SSF46955 3 125 3.44E-33 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily CDG62_00960 eb37b41fef56b18cd3192bb91cc6f971 130 SMART SM00422 3 72 2.2E-24 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_00960 eb37b41fef56b18cd3192bb91cc6f971 130 Pfam PF13411 MerR HTH family regulatory protein 4 70 9.0E-18 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_00960 eb37b41fef56b18cd3192bb91cc6f971 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 5.6E-7 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_00960 eb37b41fef56b18cd3192bb91cc6f971 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 5.6E-7 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_00960 eb37b41fef56b18cd3192bb91cc6f971 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 5.6E-7 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_00960 eb37b41fef56b18cd3192bb91cc6f971 130 Gene3D G3DSA:1.10.1660.10 1 119 8.6E-31 T 23-10-2018 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 Gene3D G3DSA:2.70.98.90 82 374 6.7E-96 T 23-10-2018 IPR038221 YidC, periplasmic domain superfamily CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 575 23.456 T 23-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 5 393 5.0E-105 T 23-10-2018 IPR028053 Membrane insertase YidC, N-terminal CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 PRINTS PR00701 60kDa inner membrane protein signature 3 24 2.8E-70 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 PRINTS PR00701 60kDa inner membrane protein signature 283 298 2.8E-70 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 PRINTS PR00701 60kDa inner membrane protein signature 250 268 2.8E-70 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 PRINTS PR00701 60kDa inner membrane protein signature 456 479 2.8E-70 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 PRINTS PR00701 60kDa inner membrane protein signature 503 525 2.8E-70 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 PRINTS PR00701 60kDa inner membrane protein signature 192 212 2.8E-70 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 PRINTS PR00701 60kDa inner membrane protein signature 365 385 2.8E-70 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 PRINTS PR00701 60kDa inner membrane protein signature 539 562 2.8E-70 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 Pfam PF02096 60Kd inner membrane protein 395 573 1.2E-60 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 PRINTS PR01900 YidC translocation/secretion protein signature 380 396 1.2E-24 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 PRINTS PR01900 YidC translocation/secretion protein signature 509 524 1.2E-24 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 PRINTS PR01900 YidC translocation/secretion protein signature 528 552 1.2E-24 T 23-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 394 573 9.6E-71 T 23-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_19240 226038c5f873d436a2ea7657b64accb1 587 Pfam PF14849 YidC periplasmic domain 86 382 8.2E-69 T 23-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain CDG62_07905 6ae944c99767f5fb05148924bd7e538e 208 SUPERFAMILY SSF109604 30 204 8.37E-21 T 23-10-2018 CDG62_07905 6ae944c99767f5fb05148924bd7e538e 208 Gene3D G3DSA:1.10.3210.10 17 183 1.1E-6 T 23-10-2018 CDG62_07905 6ae944c99767f5fb05148924bd7e538e 208 PIRSF PIRSF035170 2 208 6.7E-53 T 23-10-2018 IPR009218 Predicted HD phosphohydrolase CDG62_19230 cca32a96b0d3cac0c9026724f7ee53c9 381 Gene3D G3DSA:1.20.1250.20 196 377 5.4E-6 T 23-10-2018 CDG62_19230 cca32a96b0d3cac0c9026724f7ee53c9 381 Pfam PF07690 Major Facilitator Superfamily 3 338 1.2E-21 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_19230 cca32a96b0d3cac0c9026724f7ee53c9 381 Gene3D G3DSA:1.20.1250.20 1 191 5.0E-20 T 23-10-2018 CDG62_19230 cca32a96b0d3cac0c9026724f7ee53c9 381 SUPERFAMILY SSF103473 2 372 7.46E-34 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_14185 a0e788b9a699caf30b4486ecb0541e36 212 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 18 211 1.9E-87 T 23-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CDG62_14185 a0e788b9a699caf30b4486ecb0541e36 212 SUPERFAMILY SSF89360 14 110 1.02E-19 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDG62_14185 a0e788b9a699caf30b4486ecb0541e36 212 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 16 211 40.888 T 23-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CDG62_14185 a0e788b9a699caf30b4486ecb0541e36 212 Gene3D G3DSA:3.30.300.130 121 210 1.8E-19 T 23-10-2018 IPR034904 Fe-S cluster assembly domain superfamily CDG62_14185 a0e788b9a699caf30b4486ecb0541e36 212 Pfam PF01521 Iron-sulphur cluster biosynthesis 17 112 1.1E-7 T 23-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CDG62_14185 a0e788b9a699caf30b4486ecb0541e36 212 SUPERFAMILY SSF117916 111 204 6.98E-21 T 23-10-2018 IPR034904 Fe-S cluster assembly domain superfamily CDG62_14185 a0e788b9a699caf30b4486ecb0541e36 212 Gene3D G3DSA:2.60.300.12 16 113 8.7E-9 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDG62_14185 a0e788b9a699caf30b4486ecb0541e36 212 Pfam PF01106 NifU-like domain 127 198 4.2E-19 T 23-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CDG62_14185 a0e788b9a699caf30b4486ecb0541e36 212 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 134 198 1.0E-26 T 23-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CDG62_18965 211f2857778137997233842a7c62d09a 281 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 114 278 7.2E-58 T 23-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 CDG62_18965 211f2857778137997233842a7c62d09a 281 SUPERFAMILY SSF54675 7 112 7.46E-31 T 23-10-2018 CDG62_18965 211f2857778137997233842a7c62d09a 281 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 24 112 3.5E-24 T 23-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CDG62_18965 211f2857778137997233842a7c62d09a 281 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 16 279 1.0E-95 T 23-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 CDG62_18965 211f2857778137997233842a7c62d09a 281 SUPERFAMILY SSF51690 114 279 3.65E-59 T 23-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CDG62_18965 211f2857778137997233842a7c62d09a 281 Gene3D G3DSA:3.90.1170.20 10 278 9.6E-111 T 23-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 CDG62_18965 211f2857778137997233842a7c62d09a 281 Gene3D G3DSA:3.20.20.70 123 269 9.6E-111 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_18965 211f2857778137997233842a7c62d09a 281 PIRSF PIRSF006250 6 281 1.6E-96 T 23-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CDG62_00490 9b482422eac0897c8d8f0e4b300c1e14 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 58 81 1.9E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_00490 9b482422eac0897c8d8f0e4b300c1e14 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 50 1.9E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_00490 9b482422eac0897c8d8f0e4b300c1e14 234 SUPERFAMILY SSF48498 96 231 2.56E-32 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG62_00490 9b482422eac0897c8d8f0e4b300c1e14 234 Gene3D G3DSA:1.10.357.10 95 233 4.5E-30 T 23-10-2018 CDG62_00490 9b482422eac0897c8d8f0e4b300c1e14 234 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 97 227 9.8E-26 T 23-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 CDG62_00490 9b482422eac0897c8d8f0e4b300c1e14 234 PRINTS PR00400 Tetracycline repressor protein signature 210 224 8.2E-35 T 23-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CDG62_00490 9b482422eac0897c8d8f0e4b300c1e14 234 PRINTS PR00400 Tetracycline repressor protein signature 123 146 8.2E-35 T 23-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CDG62_00490 9b482422eac0897c8d8f0e4b300c1e14 234 PRINTS PR00400 Tetracycline repressor protein signature 103 122 8.2E-35 T 23-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CDG62_00490 9b482422eac0897c8d8f0e4b300c1e14 234 PRINTS PR00400 Tetracycline repressor protein signature 158 177 8.2E-35 T 23-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CDG62_00490 9b482422eac0897c8d8f0e4b300c1e14 234 PRINTS PR00400 Tetracycline repressor protein signature 49 72 8.2E-35 T 23-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CDG62_00490 9b482422eac0897c8d8f0e4b300c1e14 234 Gene3D G3DSA:1.10.10.60 30 93 3.1E-25 T 23-10-2018 CDG62_00490 9b482422eac0897c8d8f0e4b300c1e14 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 38 83 1.8E-11 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_00490 9b482422eac0897c8d8f0e4b300c1e14 234 SUPERFAMILY SSF46689 31 91 9.98E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_06435 28e3446a43bfefd5e480f13e037085ad 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 1.3E-23 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_06435 28e3446a43bfefd5e480f13e037085ad 238 Pfam PF00072 Response regulator receiver domain 10 119 1.7E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_06435 28e3446a43bfefd5e480f13e037085ad 238 Gene3D G3DSA:3.40.50.2300 1 129 8.3E-36 T 23-10-2018 CDG62_06435 28e3446a43bfefd5e480f13e037085ad 238 SMART SM00448 8 118 3.0E-38 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_06435 28e3446a43bfefd5e480f13e037085ad 238 SMART SM00862 155 231 2.8E-25 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_06435 28e3446a43bfefd5e480f13e037085ad 238 SUPERFAMILY SSF46894 135 232 4.82E-28 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG62_06435 28e3446a43bfefd5e480f13e037085ad 238 Gene3D G3DSA:1.10.10.10 130 238 9.3E-41 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_06435 28e3446a43bfefd5e480f13e037085ad 238 SUPERFAMILY SSF52172 8 130 3.98E-37 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_08465 fac25cfed7c2726317091ae27c87a872 350 SUPERFAMILY SSF52733 2 345 6.41E-108 T 23-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDG62_08465 fac25cfed7c2726317091ae27c87a872 350 Pfam PF02277 Phosphoribosyltransferase 9 345 1.4E-122 T 23-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDG62_08465 fac25cfed7c2726317091ae27c87a872 350 Gene3D G3DSA:3.40.50.10210 54 328 6.3E-119 T 23-10-2018 CDG62_08465 fac25cfed7c2726317091ae27c87a872 350 Gene3D G3DSA:1.10.1610.10 22 345 6.3E-119 T 23-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDG62_08465 fac25cfed7c2726317091ae27c87a872 350 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 10 347 33.244 T 23-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDG62_08465 fac25cfed7c2726317091ae27c87a872 350 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 12 345 3.0E-123 T 23-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 CDG62_03420 2618eee5f68bea7b026f41089fcdc32e 168 SUPERFAMILY SSF111069 35 156 1.44E-7 T 23-10-2018 IPR035944 YfbM-like super family CDG62_03420 2618eee5f68bea7b026f41089fcdc32e 168 Gene3D G3DSA:3.40.1760.10 1 159 3.6E-9 T 23-10-2018 IPR035944 YfbM-like super family CDG62_03420 2618eee5f68bea7b026f41089fcdc32e 168 Pfam PF08974 Domain of unknown function (DUF1877) 5 155 8.6E-13 T 23-10-2018 IPR015068 Protein of unknown function DUF1877 CDG62_10765 6b0dca9c196d9af7be2fae1e3370d77a 77 Gene3D G3DSA:1.25.40.10 2 76 2.0E-7 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_10765 6b0dca9c196d9af7be2fae1e3370d77a 77 SUPERFAMILY SSF81901 18 73 4.84E-7 T 23-10-2018 CDG62_06835 3b86d2056896f1c3239ad3020e1595f3 350 SUPERFAMILY SSF55174 48 136 3.36E-7 T 23-10-2018 CDG62_06835 3b86d2056896f1c3239ad3020e1595f3 350 Gene3D G3DSA:3.30.2350.10 116 347 1.4E-68 T 23-10-2018 CDG62_06835 3b86d2056896f1c3239ad3020e1595f3 350 Pfam PF00849 RNA pseudouridylate synthase 123 272 7.9E-31 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_06835 3b86d2056896f1c3239ad3020e1595f3 350 Pfam PF01479 S4 domain 51 91 2.2E-5 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_06835 3b86d2056896f1c3239ad3020e1595f3 350 Gene3D G3DSA:3.10.290.10 34 107 1.5E-15 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDG62_06835 3b86d2056896f1c3239ad3020e1595f3 350 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 48 344 2.7E-92 T 23-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_06835 3b86d2056896f1c3239ad3020e1595f3 350 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 166 180 - T 23-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_06835 3b86d2056896f1c3239ad3020e1595f3 350 SUPERFAMILY SSF55120 109 345 3.5E-75 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_02730 6189557a93df068a16ec896876edb2f4 346 Pfam PF00665 Integrase core domain 161 283 2.0E-20 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_02730 6189557a93df068a16ec896876edb2f4 346 Gene3D G3DSA:3.30.420.10 160 326 1.5E-15 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_02730 6189557a93df068a16ec896876edb2f4 346 SUPERFAMILY SSF46689 17 114 6.81E-5 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_02730 6189557a93df068a16ec896876edb2f4 346 Pfam PF13551 Winged helix-turn helix 12 74 5.6E-17 T 23-10-2018 CDG62_02730 6189557a93df068a16ec896876edb2f4 346 SUPERFAMILY SSF53098 160 331 1.12E-36 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_07565 92ce587e441902869d36d9a21766a615 270 Gene3D G3DSA:3.30.1130.10 14 130 9.7E-40 T 23-10-2018 CDG62_07565 92ce587e441902869d36d9a21766a615 270 TIGRFAM TIGR03138 QueF: queuine synthase 3 270 2.0E-112 T 23-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDG62_07565 92ce587e441902869d36d9a21766a615 270 PIRSF PIRSF004750 1 270 4.1E-109 T 23-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDG62_07565 92ce587e441902869d36d9a21766a615 270 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 270 117.155 T 23-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDG62_07565 92ce587e441902869d36d9a21766a615 270 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 14 122 3.9E-38 T 23-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDG62_07565 92ce587e441902869d36d9a21766a615 270 SUPERFAMILY SSF55620 166 255 3.19E-11 T 23-10-2018 CDG62_07565 92ce587e441902869d36d9a21766a615 270 Gene3D G3DSA:3.30.1130.10 132 270 1.2E-53 T 23-10-2018 CDG62_07565 92ce587e441902869d36d9a21766a615 270 Pfam PF14489 QueF-like protein 183 254 1.0E-21 T 23-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CDG62_12565 3ead87e3fe28144485b8d4522b96763e 299 Pfam PF01882 Protein of unknown function DUF58 197 271 3.0E-8 T 23-10-2018 IPR002881 Domain of unknown function DUF58 CDG62_10705 de127819dd5f139b42844a0a7de89b87 363 Pfam PF00561 alpha/beta hydrolase fold 76 336 4.4E-6 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_10705 de127819dd5f139b42844a0a7de89b87 363 Gene3D G3DSA:3.40.50.1820 34 362 7.1E-19 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_10705 de127819dd5f139b42844a0a7de89b87 363 SUPERFAMILY SSF53474 48 358 2.23E-24 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_08115 efc1ef01047cb88ba9313edeb8bfc415 533 SUPERFAMILY SSF52096 237 515 3.55E-84 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_08115 efc1ef01047cb88ba9313edeb8bfc415 533 SUPERFAMILY SSF52096 23 269 5.27E-71 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_08115 efc1ef01047cb88ba9313edeb8bfc415 533 Pfam PF01039 Carboxyl transferase domain 48 523 1.2E-149 T 23-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 CDG62_08115 efc1ef01047cb88ba9313edeb8bfc415 533 Gene3D G3DSA:3.90.226.10 271 533 1.3E-101 T 23-10-2018 CDG62_08115 efc1ef01047cb88ba9313edeb8bfc415 533 Gene3D G3DSA:3.90.226.10 1 270 1.9E-97 T 23-10-2018 CDG62_02850 e23e75dd054f604f8bafc8e9fc65e49b 552 Gene3D G3DSA:3.40.50.720 296 519 5.6E-20 T 23-10-2018 CDG62_02850 e23e75dd054f604f8bafc8e9fc65e49b 552 SUPERFAMILY SSF69572 296 552 2.09E-20 T 23-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CDG62_02850 e23e75dd054f604f8bafc8e9fc65e49b 552 Pfam PF00899 ThiF family 296 456 6.6E-14 T 23-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CDG62_00715 3a19e60badf8b89578364bbc9bb6bb92 328 SUPERFAMILY SSF102114 4 265 3.73E-24 T 23-10-2018 CDG62_00715 3a19e60badf8b89578364bbc9bb6bb92 328 Gene3D G3DSA:3.20.20.70 1 284 1.6E-31 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_00715 3a19e60badf8b89578364bbc9bb6bb92 328 Pfam PF04055 Radical SAM superfamily 24 133 7.2E-8 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG62_06905 6fe83e00712d60ae98322d836b96384a 530 Gene3D G3DSA:3.50.50.60 44 287 5.2E-69 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_06905 6fe83e00712d60ae98322d836b96384a 530 PIRSF PIRSF000332 49 272 1.4E-21 T 23-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 CDG62_06905 6fe83e00712d60ae98322d836b96384a 530 PIRSF PIRSF000332 336 493 1.0 T 23-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 CDG62_06905 6fe83e00712d60ae98322d836b96384a 530 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 51 73 7.0E-7 T 23-10-2018 CDG62_06905 6fe83e00712d60ae98322d836b96384a 530 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 216 241 7.0E-7 T 23-10-2018 CDG62_06905 6fe83e00712d60ae98322d836b96384a 530 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 53 256 2.3E-21 T 23-10-2018 CDG62_06905 6fe83e00712d60ae98322d836b96384a 530 SUPERFAMILY SSF51905 50 448 5.79E-51 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_06905 6fe83e00712d60ae98322d836b96384a 530 Gene3D G3DSA:3.50.50.60 355 529 2.4E-24 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_05660 1405bcf058639107ad34a9406a310667 191 SUPERFAMILY SSF52799 37 162 1.24E-25 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like CDG62_05660 1405bcf058639107ad34a9406a310667 191 SMART SM00195 41 171 0.0088 T 23-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 CDG62_05660 1405bcf058639107ad34a9406a310667 191 Gene3D G3DSA:3.90.190.10 27 190 6.0E-37 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like CDG62_05660 1405bcf058639107ad34a9406a310667 191 Pfam PF00782 Dual specificity phosphatase, catalytic domain 53 158 1.0E-12 T 23-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 CDG62_05660 1405bcf058639107ad34a9406a310667 191 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 125 135 - T 23-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 CDG62_11340 6696445fb08740700d46e31a19b23bb0 105 Pfam PF01022 Bacterial regulatory protein, arsR family 28 72 3.5E-12 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_11340 6696445fb08740700d46e31a19b23bb0 105 SUPERFAMILY SSF46785 12 100 8.79E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_11340 6696445fb08740700d46e31a19b23bb0 105 SMART SM00418 19 93 1.6E-20 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_11340 6696445fb08740700d46e31a19b23bb0 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 4.5E-10 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_11340 6696445fb08740700d46e31a19b23bb0 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 4.5E-10 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_11340 6696445fb08740700d46e31a19b23bb0 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 4.5E-10 T 23-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CDG62_11340 6696445fb08740700d46e31a19b23bb0 105 Gene3D G3DSA:1.10.10.10 7 104 1.4E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_08120 c32f53458b2b33a1e07c00d08a01c976 390 PIRSF PIRSF016578 13 390 1.0E-13 T 23-10-2018 CDG62_08120 c32f53458b2b33a1e07c00d08a01c976 390 Gene3D G3DSA:2.40.110.10 126 238 1.3E-43 T 23-10-2018 CDG62_08120 c32f53458b2b33a1e07c00d08a01c976 390 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG62_08120 c32f53458b2b33a1e07c00d08a01c976 390 SUPERFAMILY SSF47203 233 388 5.48E-42 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_08120 c32f53458b2b33a1e07c00d08a01c976 390 Gene3D G3DSA:1.10.540.10 2 125 1.9E-45 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG62_08120 c32f53458b2b33a1e07c00d08a01c976 390 SUPERFAMILY SSF56645 6 247 6.41E-85 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_08120 c32f53458b2b33a1e07c00d08a01c976 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG62_08120 c32f53458b2b33a1e07c00d08a01c976 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 123 1.9E-36 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG62_08120 c32f53458b2b33a1e07c00d08a01c976 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 4.9E-24 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG62_08120 c32f53458b2b33a1e07c00d08a01c976 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 385 1.2E-37 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG62_08120 c32f53458b2b33a1e07c00d08a01c976 390 Gene3D G3DSA:1.20.140.10 239 388 1.7E-41 T 23-10-2018 CDG62_14065 fccaec309ff7591e319b0d18ae77088e 100 Gene3D G3DSA:1.10.225.20 2 95 1.3E-29 T 23-10-2018 CDG62_14065 fccaec309ff7591e319b0d18ae77088e 100 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 4 94 4.0E-33 T 23-10-2018 IPR024476 Protein of unknown function DUF3861 CDG62_08105 42a36a26133cbaffb123517fe291ff66 663 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_08105 42a36a26133cbaffb123517fe291ff66 663 SUPERFAMILY SSF56059 83 347 9.9E-67 T 23-10-2018 CDG62_08105 42a36a26133cbaffb123517fe291ff66 663 SUPERFAMILY SSF52440 1 113 1.08E-49 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG62_08105 42a36a26133cbaffb123517fe291ff66 663 Gene3D G3DSA:3.30.470.130 1 451 2.8E-196 T 23-10-2018 CDG62_08105 42a36a26133cbaffb123517fe291ff66 663 SUPERFAMILY SSF51246 331 445 1.36E-36 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDG62_08105 42a36a26133cbaffb123517fe291ff66 663 Pfam PF00364 Biotin-requiring enzyme 590 655 1.2E-14 T 23-10-2018 IPR000089 Biotin/lipoyl attachment CDG62_08105 42a36a26133cbaffb123517fe291ff66 663 Gene3D G3DSA:2.40.50.100 581 658 1.4E-21 T 23-10-2018 CDG62_08105 42a36a26133cbaffb123517fe291ff66 663 SMART SM00878 336 443 6.3E-49 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_08105 42a36a26133cbaffb123517fe291ff66 663 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_08105 42a36a26133cbaffb123517fe291ff66 663 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 6.5E-47 T 23-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_08105 42a36a26133cbaffb123517fe291ff66 663 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 1.1E-73 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_08105 42a36a26133cbaffb123517fe291ff66 663 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 1.8E-36 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_08105 42a36a26133cbaffb123517fe291ff66 663 SUPERFAMILY SSF51230 578 656 6.94E-19 T 23-10-2018 IPR011053 Single hybrid motif CDG62_07840 ef91509ea296b1b0121e5dd23f8f34a8 88 Pfam PF07023 Protein of unknown function (DUF1315) 4 79 1.5E-32 T 23-10-2018 IPR009749 Protein of unknown function DUF1315 CDG62_11095 d56208fb519fa5e7af567718815b9206 709 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 168 9.5E-11 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_11095 d56208fb519fa5e7af567718815b9206 709 Pfam PF00593 TonB dependent receptor 278 707 3.7E-36 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_11095 d56208fb519fa5e7af567718815b9206 709 Gene3D G3DSA:2.170.130.10 54 178 3.7E-22 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_11095 d56208fb519fa5e7af567718815b9206 709 Gene3D G3DSA:2.40.170.20 179 709 1.2E-80 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_11095 d56208fb519fa5e7af567718815b9206 709 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 709 5.3E-121 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDG62_11095 d56208fb519fa5e7af567718815b9206 709 SUPERFAMILY SSF56935 35 709 4.58E-103 T 23-10-2018 CDG62_03200 d84d5ef070f568d8106713da7f1fae66 52 PIRSF PIRSF036466 1 52 3.4E-18 T 23-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CDG62_03200 d84d5ef070f568d8106713da7f1fae66 52 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 51 17.475 T 23-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CDG62_03200 d84d5ef070f568d8106713da7f1fae66 52 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 3.0E-9 T 23-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CDG62_07890 8d090b53dcdaa1c8432910c8229fdfb5 146 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 24 144 6.7E-23 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG62_07890 8d090b53dcdaa1c8432910c8229fdfb5 146 Gene3D G3DSA:2.40.128.520 19 146 1.7E-16 T 23-10-2018 CDG62_14795 67ebd1afb819d49e82747987950b55e6 273 Pfam PF01614 Bacterial transcriptional regulator 144 264 4.5E-10 T 23-10-2018 IPR014757 Transcription regulator IclR, C-terminal CDG62_14795 67ebd1afb819d49e82747987950b55e6 273 Gene3D G3DSA:3.30.450.40 96 265 8.4E-25 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG62_14795 67ebd1afb819d49e82747987950b55e6 273 Pfam PF09339 IclR helix-turn-helix domain 25 74 1.2E-12 T 23-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CDG62_14795 67ebd1afb819d49e82747987950b55e6 273 SMART SM00346 23 112 7.0E-12 T 23-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CDG62_14795 67ebd1afb819d49e82747987950b55e6 273 SUPERFAMILY SSF46785 23 95 7.87E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_14795 67ebd1afb819d49e82747987950b55e6 273 Gene3D G3DSA:1.10.10.10 16 91 2.0E-15 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_14795 67ebd1afb819d49e82747987950b55e6 273 SUPERFAMILY SSF55781 89 267 1.57E-28 T 23-10-2018 CDG62_05555 942d7f2b025d085659f097b02b7487d2 228 SMART SM00862 144 223 3.2E-24 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_05555 942d7f2b025d085659f097b02b7487d2 228 Gene3D G3DSA:1.10.10.10 129 225 1.1E-29 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_05555 942d7f2b025d085659f097b02b7487d2 228 SMART SM00448 2 112 6.6E-41 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_05555 942d7f2b025d085659f097b02b7487d2 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 223 1.4E-23 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_05555 942d7f2b025d085659f097b02b7487d2 228 SUPERFAMILY SSF46894 131 225 1.13E-23 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG62_05555 942d7f2b025d085659f097b02b7487d2 228 SUPERFAMILY SSF52172 1 125 3.13E-41 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_05555 942d7f2b025d085659f097b02b7487d2 228 Pfam PF00072 Response regulator receiver domain 4 113 2.2E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_05555 942d7f2b025d085659f097b02b7487d2 228 Gene3D G3DSA:3.40.50.2300 1 128 1.2E-37 T 23-10-2018 CDG62_02955 02430ae37172264b8850164aa7c0cbc5 182 ProSitePatterns PS01071 grpE protein signature. 139 180 - T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDG62_02955 02430ae37172264b8850164aa7c0cbc5 182 SUPERFAMILY SSF51064 138 181 1.7E-10 T 23-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CDG62_02955 02430ae37172264b8850164aa7c0cbc5 182 Hamap MF_01151 Protein GrpE [grpE]. 10 182 15.848 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDG62_02955 02430ae37172264b8850164aa7c0cbc5 182 SUPERFAMILY SSF58014 34 129 1.16E-17 T 23-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CDG62_02955 02430ae37172264b8850164aa7c0cbc5 182 Gene3D G3DSA:2.30.22.10 129 181 3.1E-14 T 23-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CDG62_02955 02430ae37172264b8850164aa7c0cbc5 182 Pfam PF01025 GrpE 25 181 1.0E-35 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDG62_02955 02430ae37172264b8850164aa7c0cbc5 182 Gene3D G3DSA:3.90.20.20 24 128 9.3E-16 T 23-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CDG62_02955 02430ae37172264b8850164aa7c0cbc5 182 PRINTS PR00773 GrpE protein signature 136 151 1.3E-16 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDG62_02955 02430ae37172264b8850164aa7c0cbc5 182 PRINTS PR00773 GrpE protein signature 85 100 1.3E-16 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDG62_02955 02430ae37172264b8850164aa7c0cbc5 182 PRINTS PR00773 GrpE protein signature 161 180 1.3E-16 T 23-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CDG62_12685 df2f145141695649e0623a143354bab5 457 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 15 455 3.9E-248 T 23-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 CDG62_12685 df2f145141695649e0623a143354bab5 457 Pfam PF00202 Aminotransferase class-III 34 447 1.7E-92 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_12685 df2f145141695649e0623a143354bab5 457 SUPERFAMILY SSF53383 24 448 1.55E-118 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_12685 df2f145141695649e0623a143354bab5 457 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_12685 df2f145141695649e0623a143354bab5 457 Gene3D G3DSA:3.90.1150.10 23 440 3.2E-132 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_12685 df2f145141695649e0623a143354bab5 457 Gene3D G3DSA:3.40.640.10 71 338 3.2E-132 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_16355 26d36dfee8bebb23b5edf9e947cc3f3c 326 SUPERFAMILY SSF55681 91 325 4.56E-81 T 23-10-2018 CDG62_16355 26d36dfee8bebb23b5edf9e947cc3f3c 326 SUPERFAMILY SSF46589 11 98 1.36E-19 T 23-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 CDG62_16355 26d36dfee8bebb23b5edf9e947cc3f3c 326 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 325 3.1E-109 T 23-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CDG62_16355 26d36dfee8bebb23b5edf9e947cc3f3c 326 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 18 86 1.9E-20 T 23-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CDG62_16355 26d36dfee8bebb23b5edf9e947cc3f3c 326 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 7 325 47.335 T 23-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CDG62_16355 26d36dfee8bebb23b5edf9e947cc3f3c 326 Gene3D G3DSA:3.30.930.10 7 326 5.0E-121 T 23-10-2018 CDG62_16355 26d36dfee8bebb23b5edf9e947cc3f3c 326 Pfam PF01409 tRNA synthetases class II core domain (F) 91 325 1.7E-104 T 23-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CDG62_19160 8829cb1be6e90cbdf8d0a6485ecfc572 455 SUPERFAMILY SSF53244 314 452 1.24E-38 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG62_19160 8829cb1be6e90cbdf8d0a6485ecfc572 455 SUPERFAMILY SSF53623 97 312 3.53E-50 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG62_19160 8829cb1be6e90cbdf8d0a6485ecfc572 455 Gene3D G3DSA:3.40.50.720 1 90 2.3E-33 T 23-10-2018 CDG62_19160 8829cb1be6e90cbdf8d0a6485ecfc572 455 Gene3D G3DSA:3.40.1190.10 91 317 1.4E-56 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG62_19160 8829cb1be6e90cbdf8d0a6485ecfc572 455 Gene3D G3DSA:3.90.190.20 318 454 9.0E-32 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG62_19160 8829cb1be6e90cbdf8d0a6485ecfc572 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 363 1.3E-10 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CDG62_19160 8829cb1be6e90cbdf8d0a6485ecfc572 455 Pfam PF01225 Mur ligase family, catalytic domain 2 99 1.1E-16 T 23-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CDG62_19160 8829cb1be6e90cbdf8d0a6485ecfc572 455 SUPERFAMILY SSF51984 1 90 2.22E-21 T 23-10-2018 CDG62_19160 8829cb1be6e90cbdf8d0a6485ecfc572 455 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 452 3.7E-203 T 23-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 CDG62_19160 8829cb1be6e90cbdf8d0a6485ecfc572 455 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 453 57.392 T 23-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 CDG62_19160 8829cb1be6e90cbdf8d0a6485ecfc572 455 Pfam PF08245 Mur ligase middle domain 108 295 2.0E-22 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDG62_07305 06a364d2cc9cf0caaf3e752bcae74120 348 Pfam PF02885 Glycosyl transferase family, helical bundle domain 9 66 1.7E-18 T 23-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG62_07305 06a364d2cc9cf0caaf3e752bcae74120 348 Gene3D G3DSA:1.20.970.10 1 70 4.2E-30 T 23-10-2018 CDG62_07305 06a364d2cc9cf0caaf3e752bcae74120 348 SUPERFAMILY SSF52418 75 342 3.4E-87 T 23-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG62_07305 06a364d2cc9cf0caaf3e752bcae74120 348 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 337 5.0E-117 T 23-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CDG62_07305 06a364d2cc9cf0caaf3e752bcae74120 348 SUPERFAMILY SSF47648 1 70 3.66E-20 T 23-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG62_07305 06a364d2cc9cf0caaf3e752bcae74120 348 Gene3D G3DSA:3.40.1030.10 71 348 2.0E-102 T 23-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG62_07305 06a364d2cc9cf0caaf3e752bcae74120 348 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 339 37.913 T 23-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CDG62_07305 06a364d2cc9cf0caaf3e752bcae74120 348 Pfam PF00591 Glycosyl transferase family, a/b domain 76 330 7.0E-99 T 23-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG62_16135 464ce373c8a63fe7ba992e8732034d7f 554 Gene3D G3DSA:2.40.160.60 130 554 2.5E-59 T 23-10-2018 CDG62_16135 464ce373c8a63fe7ba992e8732034d7f 554 SUPERFAMILY SSF56935 30 552 1.05E-56 T 23-10-2018 CDG62_16135 464ce373c8a63fe7ba992e8732034d7f 554 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 31 553 1.2E-69 T 23-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDG62_10560 f77ac37b537df80e3696657243fef24c 360 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 1 360 42.495 T 23-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CDG62_10560 f77ac37b537df80e3696657243fef24c 360 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 293 322 - T 23-10-2018 IPR030390 RNA methyltransferase TrmA, active site CDG62_10560 f77ac37b537df80e3696657243fef24c 360 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 4 359 1.4E-165 T 23-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CDG62_10560 f77ac37b537df80e3696657243fef24c 360 Gene3D G3DSA:3.40.1350.30 39 181 9.4E-133 T 23-10-2018 CDG62_10560 f77ac37b537df80e3696657243fef24c 360 SUPERFAMILY SSF53335 3 359 1.94E-51 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_10560 f77ac37b537df80e3696657243fef24c 360 Gene3D G3DSA:3.40.50.150 7 356 9.4E-133 T 23-10-2018 CDG62_10560 f77ac37b537df80e3696657243fef24c 360 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 4 359 4.6E-162 T 23-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CDG62_10560 f77ac37b537df80e3696657243fef24c 360 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 342 352 - T 23-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site CDG62_08690 f43d196930135b78c4d2b34f261479d5 128 Pfam PF01250 Ribosomal protein S6 3 91 2.3E-25 T 23-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08690 f43d196930135b78c4d2b34f261479d5 128 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 8.1E-33 T 23-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08690 f43d196930135b78c4d2b34f261479d5 128 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 20.568 T 23-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDG62_08690 f43d196930135b78c4d2b34f261479d5 128 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 23-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDG62_08690 f43d196930135b78c4d2b34f261479d5 128 SUPERFAMILY SSF54995 1 101 3.92E-36 T 23-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08690 f43d196930135b78c4d2b34f261479d5 128 Gene3D G3DSA:3.30.70.60 1 92 1.8E-29 T 23-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CDG62_04380 5dc90b82cd2ad9cb2551bbf5b2de19d2 290 SUPERFAMILY SSF103481 183 281 1.57E-12 T 23-10-2018 CDG62_04380 5dc90b82cd2ad9cb2551bbf5b2de19d2 290 Pfam PF00892 EamA-like transporter family 146 279 1.7E-16 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_06615 9c0419096342e5210f79eb620414ad54 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 23-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_06615 9c0419096342e5210f79eb620414ad54 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.14 T 23-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_06615 9c0419096342e5210f79eb620414ad54 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 3.0E-40 T 23-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_06615 9c0419096342e5210f79eb620414ad54 103 SUPERFAMILY SSF141091 1 101 7.85E-39 T 23-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_06615 9c0419096342e5210f79eb620414ad54 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.5E-41 T 23-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04825 68dc9d76576fb432b3cf4b4a58e407a2 121 Gene3D G3DSA:3.90.1030.10 1 117 1.1E-45 T 23-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04825 68dc9d76576fb432b3cf4b4a58e407a2 121 SUPERFAMILY SSF64263 1 119 2.75E-49 T 23-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04825 68dc9d76576fb432b3cf4b4a58e407a2 121 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.129 T 23-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04825 68dc9d76576fb432b3cf4b4a58e407a2 121 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 5.4E-45 T 23-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04825 68dc9d76576fb432b3cf4b4a58e407a2 121 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 23-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04825 68dc9d76576fb432b3cf4b4a58e407a2 121 Pfam PF01196 Ribosomal protein L17 20 116 2.3E-33 T 23-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 1.4E-48 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 SUPERFAMILY SSF54980 393 468 7.91E-18 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 Gene3D G3DSA:3.40.50.300 110 275 2.9E-111 T 23-10-2018 CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 SUPERFAMILY SSF52540 10 277 2.97E-84 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 7 529 1.2E-259 T 23-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.066 T 23-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 Gene3D G3DSA:3.30.70.3280 390 529 1.9E-52 T 23-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 4.1E-47 T 23-10-2018 IPR032090 Peptide chain release factor 3, C-terminal CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 Gene3D G3DSA:3.40.50.300 72 379 2.9E-111 T 23-10-2018 CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 169 1.3E-19 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 SUPERFAMILY SSF50447 262 393 1.49E-27 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 2.0E-12 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 2.0E-12 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.0E-12 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.0E-12 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_16735 e23dbec86f61caba6a36eebb62d56d72 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 2.0E-12 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_13750 832d4dede5e1dc3df19ec6ac331c4ca9 336 Pfam PF00753 Metallo-beta-lactamase superfamily 61 264 9.6E-17 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_13750 832d4dede5e1dc3df19ec6ac331c4ca9 336 SMART SM00849 63 276 1.6E-5 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_13750 832d4dede5e1dc3df19ec6ac331c4ca9 336 Gene3D G3DSA:3.60.15.10 47 336 8.4E-54 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_13750 832d4dede5e1dc3df19ec6ac331c4ca9 336 SUPERFAMILY SSF56281 47 335 1.18E-43 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_13175 ac24b5c32da529e15b4041cd30c096af 189 Pfam PF07238 PilZ domain 110 182 1.0E-5 T 23-10-2018 IPR009875 PilZ domain GO:0035438 CDG62_05460 291db9bb80cd4c2a1468cdc88670a64a 340 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 73 339 9.6E-29 T 23-10-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 CDG62_05535 3a585df9b69010228c39dc4b50a55cd1 593 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 584 3.6E-24 T 23-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDG62_05535 3a585df9b69010228c39dc4b50a55cd1 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 158 8.3E-16 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG62_05535 3a585df9b69010228c39dc4b50a55cd1 593 SUPERFAMILY SSF56645 36 279 7.2E-58 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_05535 3a585df9b69010228c39dc4b50a55cd1 593 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 27 2.9E-6 T 23-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CDG62_05535 3a585df9b69010228c39dc4b50a55cd1 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 8.9E-17 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG62_05535 3a585df9b69010228c39dc4b50a55cd1 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 450 4.7E-17 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG62_05535 3a585df9b69010228c39dc4b50a55cd1 593 Gene3D G3DSA:1.20.140.10 282 451 7.3E-94 T 23-10-2018 CDG62_05535 3a585df9b69010228c39dc4b50a55cd1 593 Gene3D G3DSA:2.40.110.10 161 281 7.3E-94 T 23-10-2018 CDG62_05535 3a585df9b69010228c39dc4b50a55cd1 593 Gene3D G3DSA:1.10.540.10 44 160 7.3E-94 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG62_05535 3a585df9b69010228c39dc4b50a55cd1 593 SUPERFAMILY SSF47203 288 474 4.35E-47 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_16810 565b0ec537eafdf05efcc9e4e13d9527 301 SUPERFAMILY SSF103481 206 287 1.7E-10 T 23-10-2018 CDG62_16810 565b0ec537eafdf05efcc9e4e13d9527 301 Pfam PF00892 EamA-like transporter family 150 284 7.4E-15 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_16810 565b0ec537eafdf05efcc9e4e13d9527 301 Pfam PF00892 EamA-like transporter family 4 135 3.7E-11 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_16810 565b0ec537eafdf05efcc9e4e13d9527 301 SUPERFAMILY SSF103481 36 138 1.57E-12 T 23-10-2018 CDG62_11670 df04e6367e900d2f9de89166228500aa 299 Gene3D G3DSA:1.10.10.10 1 94 6.6E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_11670 df04e6367e900d2f9de89166228500aa 299 Pfam PF03466 LysR substrate binding domain 92 291 4.4E-31 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_11670 df04e6367e900d2f9de89166228500aa 299 Gene3D G3DSA:3.40.190.290 95 297 1.0E-36 T 23-10-2018 CDG62_11670 df04e6367e900d2f9de89166228500aa 299 SUPERFAMILY SSF53850 94 296 7.33E-30 T 23-10-2018 CDG62_11670 df04e6367e900d2f9de89166228500aa 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 66 3.4E-16 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_11670 df04e6367e900d2f9de89166228500aa 299 SUPERFAMILY SSF46785 1 90 1.59E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_11670 df04e6367e900d2f9de89166228500aa 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_11670 df04e6367e900d2f9de89166228500aa 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_11670 df04e6367e900d2f9de89166228500aa 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-8 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 SUPERFAMILY SSF52009 347 466 1.31E-34 T 23-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 787 0.0 T 23-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 SUPERFAMILY SSF56059 4 383 1.17E-103 T 23-10-2018 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 Gene3D G3DSA:3.30.1490.20 2 192 1.8E-70 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 Gene3D G3DSA:3.50.30.10 357 476 1.2E-41 T 23-10-2018 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 PIRSF PIRSF000854 2 792 0.0 T 23-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 23-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 5.7E-26 T 23-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 780 5.7E-64 T 23-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 1.9E-5 T 23-10-2018 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 1.9E-5 T 23-10-2018 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 1.9E-5 T 23-10-2018 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 23-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 Gene3D G3DSA:3.30.470.20 193 356 2.7E-58 T 23-10-2018 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 Gene3D G3DSA:3.20.20.60 477 789 3.1E-104 T 23-10-2018 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 343 3.4E-118 T 23-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CDG62_08735 63302ead977f8d5b58b1acb11a8b9fc4 792 SUPERFAMILY SSF51621 461 789 8.9E-101 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDG62_06025 3ad4cb741b1c3882353321fe6fe26d78 268 Gene3D G3DSA:1.25.40.10 24 267 3.9E-36 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_06025 3ad4cb741b1c3882353321fe6fe26d78 268 SUPERFAMILY SSF81901 38 187 5.75E-22 T 23-10-2018 CDG62_06025 3ad4cb741b1c3882353321fe6fe26d78 268 SMART SM00671 58 93 6.8E-8 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_06025 3ad4cb741b1c3882353321fe6fe26d78 268 SMART SM00671 205 240 1.9 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_06025 3ad4cb741b1c3882353321fe6fe26d78 268 SMART SM00671 94 130 0.0052 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_06025 3ad4cb741b1c3882353321fe6fe26d78 268 SUPERFAMILY SSF81901 151 253 1.2E-6 T 23-10-2018 CDG62_06025 3ad4cb741b1c3882353321fe6fe26d78 268 Pfam PF08238 Sel1 repeat 94 129 0.0019 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_06025 3ad4cb741b1c3882353321fe6fe26d78 268 Pfam PF08238 Sel1 repeat 207 232 90.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_06025 3ad4cb741b1c3882353321fe6fe26d78 268 Pfam PF08238 Sel1 repeat 58 93 4.9E-7 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00730 b519a5e7f76c17ed26d27ec9d7b32b4a 617 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 423 441 6.0E-34 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG62_00730 b519a5e7f76c17ed26d27ec9d7b32b4a 617 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 349 367 6.0E-34 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG62_00730 b519a5e7f76c17ed26d27ec9d7b32b4a 617 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 394 412 6.0E-34 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG62_00730 b519a5e7f76c17ed26d27ec9d7b32b4a 617 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 456 470 6.0E-34 T 23-10-2018 IPR001270 ClpA/B family GO:0005524 CDG62_00730 b519a5e7f76c17ed26d27ec9d7b32b4a 617 Pfam PF07724 AAA domain (Cdc48 subfamily) 345 507 3.2E-38 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG62_00730 b519a5e7f76c17ed26d27ec9d7b32b4a 617 Gene3D G3DSA:3.40.50.300 278 515 2.5E-70 T 23-10-2018 CDG62_00730 b519a5e7f76c17ed26d27ec9d7b32b4a 617 SUPERFAMILY SSF52540 299 589 2.57E-50 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00730 b519a5e7f76c17ed26d27ec9d7b32b4a 617 SMART SM00382 345 499 1.9E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_14055 0e0bd909566bc88d97ba58c2dd65afa0 330 Gene3D G3DSA:3.90.180.10 18 327 1.9E-103 T 23-10-2018 CDG62_14055 0e0bd909566bc88d97ba58c2dd65afa0 330 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 6 328 7.6E-139 T 23-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 CDG62_14055 0e0bd909566bc88d97ba58c2dd65afa0 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 91 9.2E-10 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDG62_14055 0e0bd909566bc88d97ba58c2dd65afa0 330 Gene3D G3DSA:3.40.50.720 125 266 1.9E-103 T 23-10-2018 CDG62_14055 0e0bd909566bc88d97ba58c2dd65afa0 330 SMART SM00829 15 327 2.7E-52 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDG62_14055 0e0bd909566bc88d97ba58c2dd65afa0 330 SUPERFAMILY SSF50129 5 154 3.04E-40 T 23-10-2018 IPR011032 GroES-like superfamily CDG62_14055 0e0bd909566bc88d97ba58c2dd65afa0 330 SUPERFAMILY SSF51735 116 293 2.96E-43 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_14055 0e0bd909566bc88d97ba58c2dd65afa0 330 Pfam PF00107 Zinc-binding dehydrogenase 156 277 2.4E-23 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDG62_17740 5ffa7c9bf1d88c3a82c995bd93f823c0 184 Pfam PF02622 Uncharacterized ACR, COG1678 15 171 6.3E-45 T 23-10-2018 IPR003774 Protein of unknown function UPF0301 CDG62_17740 5ffa7c9bf1d88c3a82c995bd93f823c0 184 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 4 184 33.491 T 23-10-2018 IPR003774 Protein of unknown function UPF0301 CDG62_17740 5ffa7c9bf1d88c3a82c995bd93f823c0 184 SUPERFAMILY SSF143456 4 184 2.62E-60 T 23-10-2018 CDG62_17740 5ffa7c9bf1d88c3a82c995bd93f823c0 184 Gene3D G3DSA:3.40.1740.10 1 184 1.6E-73 T 23-10-2018 CDG62_07020 982f3af6bea661d06abeb8000dc9b8c8 158 Gene3D G3DSA:1.10.287.180 1 75 6.4E-29 T 23-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CDG62_07020 982f3af6bea661d06abeb8000dc9b8c8 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 5.5E-58 T 23-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CDG62_07020 982f3af6bea661d06abeb8000dc9b8c8 158 SUPERFAMILY SSF54534 82 157 2.35E-25 T 23-10-2018 CDG62_07020 982f3af6bea661d06abeb8000dc9b8c8 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 23-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CDG62_07020 982f3af6bea661d06abeb8000dc9b8c8 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 9.5E-29 T 23-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CDG62_07020 982f3af6bea661d06abeb8000dc9b8c8 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 157 8.4E-30 T 23-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CDG62_07020 982f3af6bea661d06abeb8000dc9b8c8 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.552 T 23-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CDG62_07020 982f3af6bea661d06abeb8000dc9b8c8 158 SUPERFAMILY SSF46557 3 78 1.57E-26 T 23-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 CDG62_07020 982f3af6bea661d06abeb8000dc9b8c8 158 PIRSF PIRSF006092 1 158 1.8E-52 T 23-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CDG62_07020 982f3af6bea661d06abeb8000dc9b8c8 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 23-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CDG62_07020 982f3af6bea661d06abeb8000dc9b8c8 158 Gene3D G3DSA:3.10.50.30 76 158 2.7E-32 T 23-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 CDG62_02790 c8601f27664fa410f3bc88d3dd6a20b6 275 Gene3D G3DSA:1.10.10.60 217 273 7.9E-13 T 23-10-2018 CDG62_02790 c8601f27664fa410f3bc88d3dd6a20b6 275 SUPERFAMILY SSF46689 219 268 7.17E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_02790 c8601f27664fa410f3bc88d3dd6a20b6 275 Gene3D G3DSA:1.10.10.60 167 216 6.8E-9 T 23-10-2018 CDG62_02790 c8601f27664fa410f3bc88d3dd6a20b6 275 SMART SM00342 183 265 3.3E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_02790 c8601f27664fa410f3bc88d3dd6a20b6 275 Pfam PF02311 AraC-like ligand binding domain 14 146 1.3E-19 T 23-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CDG62_02790 c8601f27664fa410f3bc88d3dd6a20b6 275 SUPERFAMILY SSF46689 171 217 5.38E-6 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_02790 c8601f27664fa410f3bc88d3dd6a20b6 275 Pfam PF12833 Helix-turn-helix domain 193 266 7.2E-18 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_02790 c8601f27664fa410f3bc88d3dd6a20b6 275 SUPERFAMILY SSF51215 19 149 3.01E-18 T 23-10-2018 IPR037923 Transcription regulator HTH-like CDG62_15155 bf202d578c843e3529a9f8310bd1c31f 216 Gene3D G3DSA:3.40.1080.10 4 216 4.4E-83 T 23-10-2018 CDG62_15155 bf202d578c843e3529a9f8310bd1c31f 216 Pfam PF01144 Coenzyme A transferase 9 197 2.2E-38 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_15155 bf202d578c843e3529a9f8310bd1c31f 216 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 47 55 - T 23-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 CDG62_15155 bf202d578c843e3529a9f8310bd1c31f 216 SMART SM00882 9 206 4.6E-61 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_15155 bf202d578c843e3529a9f8310bd1c31f 216 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 1.3E-86 T 23-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CDG62_15155 bf202d578c843e3529a9f8310bd1c31f 216 SUPERFAMILY SSF100950 8 212 2.47E-62 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG62_17610 a8499c48073329fd3d08f80e8d8f3e64 454 SUPERFAMILY SSF52540 1 370 2.02E-9 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17610 a8499c48073329fd3d08f80e8d8f3e64 454 Gene3D G3DSA:3.40.50.300 1 381 5.7E-16 T 23-10-2018 CDG62_17610 a8499c48073329fd3d08f80e8d8f3e64 454 Pfam PF13476 AAA domain 5 259 3.4E-14 T 23-10-2018 IPR038729 Rad50/SbcC-type AAA domain CDG62_10070 7995d01fb7c6f8e08d56bf48cd2f824d 292 SUPERFAMILY SSF55120 77 288 1.41E-50 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_10070 7995d01fb7c6f8e08d56bf48cd2f824d 292 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 130 144 - T 23-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_10070 7995d01fb7c6f8e08d56bf48cd2f824d 292 Gene3D G3DSA:3.30.2350.10 76 289 8.3E-46 T 23-10-2018 CDG62_10070 7995d01fb7c6f8e08d56bf48cd2f824d 292 Pfam PF00849 RNA pseudouridylate synthase 91 237 3.4E-25 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_07005 405af9bbcae56084e00b0d594b5b0dfc 146 PIRSF PIRSF006276 1 146 9.3E-24 T 23-10-2018 IPR006015 Universal stress protein A CDG62_07005 405af9bbcae56084e00b0d594b5b0dfc 146 PRINTS PR01438 Universal stress protein signature 3 21 8.6E-22 T 23-10-2018 IPR006015 Universal stress protein A CDG62_07005 405af9bbcae56084e00b0d594b5b0dfc 146 PRINTS PR01438 Universal stress protein signature 123 145 8.6E-22 T 23-10-2018 IPR006015 Universal stress protein A CDG62_07005 405af9bbcae56084e00b0d594b5b0dfc 146 PRINTS PR01438 Universal stress protein signature 105 117 8.6E-22 T 23-10-2018 IPR006015 Universal stress protein A CDG62_07005 405af9bbcae56084e00b0d594b5b0dfc 146 SUPERFAMILY SSF52402 3 145 6.87E-41 T 23-10-2018 CDG62_07005 405af9bbcae56084e00b0d594b5b0dfc 146 Pfam PF00582 Universal stress protein family 3 145 1.8E-33 T 23-10-2018 IPR006016 UspA CDG62_07005 405af9bbcae56084e00b0d594b5b0dfc 146 Gene3D G3DSA:3.40.50.620 1 146 2.4E-42 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_13785 0e0e8dccfdba0846b4b791d1e06fa920 289 SUPERFAMILY SSF53474 12 284 2.77E-59 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_13785 0e0e8dccfdba0846b4b791d1e06fa920 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 2.0E-18 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_13785 0e0e8dccfdba0846b4b791d1e06fa920 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 2.0E-18 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_13785 0e0e8dccfdba0846b4b791d1e06fa920 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 118 131 2.0E-18 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_13785 0e0e8dccfdba0846b4b791d1e06fa920 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 229 243 2.0E-18 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_13785 0e0e8dccfdba0846b4b791d1e06fa920 289 Gene3D G3DSA:3.40.50.1820 10 288 4.4E-69 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_13785 0e0e8dccfdba0846b4b791d1e06fa920 289 Pfam PF00561 alpha/beta hydrolase fold 32 271 6.8E-28 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_13785 0e0e8dccfdba0846b4b791d1e06fa920 289 PRINTS PR00412 Epoxide hydrolase signature 227 243 4.7E-10 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG62_13785 0e0e8dccfdba0846b4b791d1e06fa920 289 PRINTS PR00412 Epoxide hydrolase signature 59 74 4.7E-10 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG62_13785 0e0e8dccfdba0846b4b791d1e06fa920 289 PRINTS PR00412 Epoxide hydrolase signature 260 282 4.7E-10 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG62_13785 0e0e8dccfdba0846b4b791d1e06fa920 289 PRINTS PR00412 Epoxide hydrolase signature 118 131 4.7E-10 T 23-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 SUPERFAMILY SSF53067 201 376 1.01E-46 T 23-10-2018 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 PRINTS PR00301 70kDa heat shock protein signature 212 222 4.2E-52 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 PRINTS PR00301 70kDa heat shock protein signature 329 345 4.2E-52 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 PRINTS PR00301 70kDa heat shock protein signature 149 169 4.2E-52 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 PRINTS PR00301 70kDa heat shock protein signature 48 60 4.2E-52 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 PRINTS PR00301 70kDa heat shock protein signature 465 481 4.2E-52 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 PRINTS PR00301 70kDa heat shock protein signature 360 380 4.2E-52 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 PRINTS PR00301 70kDa heat shock protein signature 20 33 4.2E-52 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 PRINTS PR00301 70kDa heat shock protein signature 384 403 4.2E-52 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 Pfam PF00012 Hsp70 protein 21 596 9.6E-173 T 23-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 Gene3D G3DSA:2.60.34.10 380 516 3.9E-47 T 23-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 SUPERFAMILY SSF53067 19 194 7.45E-52 T 23-10-2018 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 Gene3D G3DSA:3.30.420.40 22 374 3.8E-110 T 23-10-2018 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 Gene3D G3DSA:3.90.640.10 239 311 3.8E-110 T 23-10-2018 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 206 219 - T 23-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 Gene3D G3DSA:3.30.420.40 191 361 3.8E-110 T 23-10-2018 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 614 3.0E-261 T 23-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 SUPERFAMILY SSF100920 382 534 1.57E-47 T 23-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 615 42.226 T 23-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 SUPERFAMILY SSF100934 503 614 1.37E-26 T 23-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CDG62_10605 726624194eb93e360ba1d6ef01f82b64 619 Gene3D G3DSA:1.20.1270.10 519 614 2.8E-20 T 23-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 CDG62_17135 cc62a8e88f5338df4a1bf9e80919769e 73 Pfam PF01176 Translation initiation factor 1A / IF-1 8 71 3.4E-28 T 23-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CDG62_17135 cc62a8e88f5338df4a1bf9e80919769e 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 71 4.5E-38 T 23-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CDG62_17135 cc62a8e88f5338df4a1bf9e80919769e 73 SMART SM00316 5 73 1.7E-7 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG62_17135 cc62a8e88f5338df4a1bf9e80919769e 73 Gene3D G3DSA:2.40.50.140 2 71 2.9E-37 T 23-10-2018 CDG62_17135 cc62a8e88f5338df4a1bf9e80919769e 73 SUPERFAMILY SSF50249 4 71 5.3E-29 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_17135 cc62a8e88f5338df4a1bf9e80919769e 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 73 26.966 T 23-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CDG62_06995 c753c7f558975398fa357a07a24677e2 499 Gene3D G3DSA:1.20.1530.20 2 423 2.2E-7 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG62_06995 c753c7f558975398fa357a07a24677e2 499 Pfam PF00999 Sodium/hydrogen exchanger family 12 417 1.2E-34 T 23-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CDG62_17725 122c4ee01b48b49f6abaee60c119ee8e 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 247 5.2E-63 T 23-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 CDG62_17725 122c4ee01b48b49f6abaee60c119ee8e 249 SMART SM00967 6 82 2.3E-15 T 23-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CDG62_17725 122c4ee01b48b49f6abaee60c119ee8e 249 SUPERFAMILY SSF75217 70 248 4.71E-44 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG62_17725 122c4ee01b48b49f6abaee60c119ee8e 249 Pfam PF00588 SpoU rRNA Methylase family 100 241 4.2E-37 T 23-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CDG62_17725 122c4ee01b48b49f6abaee60c119ee8e 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 79 1.0E-15 T 23-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CDG62_17725 122c4ee01b48b49f6abaee60c119ee8e 249 Gene3D G3DSA:3.40.1280.10 80 248 3.3E-51 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG62_17725 122c4ee01b48b49f6abaee60c119ee8e 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 248 37.9 T 23-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CDG62_17725 122c4ee01b48b49f6abaee60c119ee8e 249 SUPERFAMILY SSF55315 3 78 6.71E-17 T 23-10-2018 IPR029064 50S ribosomal protein L30e-like CDG62_17725 122c4ee01b48b49f6abaee60c119ee8e 249 Gene3D G3DSA:3.30.1330.30 1 78 3.1E-22 T 23-10-2018 IPR029064 50S ribosomal protein L30e-like CDG62_00545 c8714d7668e2227c62f09a9e47d3258e 313 SUPERFAMILY SSF46785 130 229 1.45E-22 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00545 c8714d7668e2227c62f09a9e47d3258e 313 Gene3D G3DSA:1.10.10.10 10 137 5.2E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_00545 c8714d7668e2227c62f09a9e47d3258e 313 SUPERFAMILY SSF46785 12 125 8.16E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00545 c8714d7668e2227c62f09a9e47d3258e 313 Gene3D G3DSA:1.10.10.10 142 232 8.4E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_00545 c8714d7668e2227c62f09a9e47d3258e 313 Pfam PF01051 Initiator Replication protein 13 224 6.2E-38 T 23-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CDG62_15135 dc68778cc3f8dfc7d932c165a8083b8a 451 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_15135 dc68778cc3f8dfc7d932c165a8083b8a 451 Pfam PF07690 Major Facilitator Superfamily 36 408 4.7E-47 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_15135 dc68778cc3f8dfc7d932c165a8083b8a 451 Gene3D G3DSA:1.20.1250.20 25 301 7.4E-60 T 23-10-2018 CDG62_15135 dc68778cc3f8dfc7d932c165a8083b8a 451 Gene3D G3DSA:1.20.1250.20 302 443 4.7E-12 T 23-10-2018 CDG62_15135 dc68778cc3f8dfc7d932c165a8083b8a 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 85 101 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_15135 dc68778cc3f8dfc7d932c165a8083b8a 451 SUPERFAMILY SSF103473 17 441 1.7E-81 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_15135 dc68778cc3f8dfc7d932c165a8083b8a 451 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 14 415 1.4E-156 T 23-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 CDG62_06900 652463e81b6593eb4c236dd6b218c68c 281 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG62_06900 652463e81b6593eb4c236dd6b218c68c 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 1.6E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06900 652463e81b6593eb4c236dd6b218c68c 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 1.6E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06900 652463e81b6593eb4c236dd6b218c68c 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 1.6E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06900 652463e81b6593eb4c236dd6b218c68c 281 Pfam PF00106 short chain dehydrogenase 16 204 4.1E-47 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06900 652463e81b6593eb4c236dd6b218c68c 281 Gene3D G3DSA:3.40.50.720 12 262 4.1E-63 T 23-10-2018 CDG62_06900 652463e81b6593eb4c236dd6b218c68c 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.5E-24 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06900 652463e81b6593eb4c236dd6b218c68c 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.5E-24 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06900 652463e81b6593eb4c236dd6b218c68c 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 1.5E-24 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06900 652463e81b6593eb4c236dd6b218c68c 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 1.5E-24 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06900 652463e81b6593eb4c236dd6b218c68c 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 1.5E-24 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06900 652463e81b6593eb4c236dd6b218c68c 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.5E-24 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06900 652463e81b6593eb4c236dd6b218c68c 281 SUPERFAMILY SSF51735 13 269 1.63E-62 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_06900 652463e81b6593eb4c236dd6b218c68c 281 PIRSF PIRSF000126 1 277 2.3E-50 T 23-10-2018 CDG62_15220 101bc25a522f638980e917dcc67b2560 423 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 187 419 4.7E-73 T 23-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_15220 101bc25a522f638980e917dcc67b2560 423 SUPERFAMILY SSF53223 10 189 5.44E-67 T 23-10-2018 CDG62_15220 101bc25a522f638980e917dcc67b2560 423 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 106 119 - T 23-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_15220 101bc25a522f638980e917dcc67b2560 423 SUPERFAMILY SSF51735 187 422 4.26E-75 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_15220 101bc25a522f638980e917dcc67b2560 423 Gene3D G3DSA:3.40.50.720 187 422 5.4E-84 T 23-10-2018 CDG62_15220 101bc25a522f638980e917dcc67b2560 423 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 41 168 1.3E-54 T 23-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_15220 101bc25a522f638980e917dcc67b2560 423 SMART SM00839 189 419 1.2E-91 T 23-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_15220 101bc25a522f638980e917dcc67b2560 423 PIRSF PIRSF000185 10 422 3.3E-158 T 23-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CDG62_15220 101bc25a522f638980e917dcc67b2560 423 Gene3D G3DSA:3.40.50.10860 43 186 6.8E-64 T 23-10-2018 CDG62_15220 101bc25a522f638980e917dcc67b2560 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 98 112 8.1E-30 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_15220 101bc25a522f638980e917dcc67b2560 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 178 200 8.1E-30 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_15220 101bc25a522f638980e917dcc67b2560 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 220 240 8.1E-30 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_15220 101bc25a522f638980e917dcc67b2560 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 347 358 8.1E-30 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_13535 dd409bc0e3ba723b4e656029adcba602 471 SMART SM00479 244 414 9.4E-38 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG62_13535 dd409bc0e3ba723b4e656029adcba602 471 Pfam PF00929 Exonuclease 246 405 2.2E-31 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG62_13535 dd409bc0e3ba723b4e656029adcba602 471 Gene3D G3DSA:3.30.420.10 1 152 2.0E-53 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_13535 dd409bc0e3ba723b4e656029adcba602 471 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 247 452 8.9E-56 T 23-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_13535 dd409bc0e3ba723b4e656029adcba602 471 Pfam PF00075 RNase H 4 136 9.5E-40 T 23-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CDG62_13535 dd409bc0e3ba723b4e656029adcba602 471 SUPERFAMILY SSF53098 4 138 8.47E-49 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_13535 dd409bc0e3ba723b4e656029adcba602 471 SUPERFAMILY SSF53098 238 413 3.39E-47 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_13535 dd409bc0e3ba723b4e656029adcba602 471 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 244 463 1.7E-78 T 23-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_13535 dd409bc0e3ba723b4e656029adcba602 471 Hamap MF_00042 Ribonuclease H [rnhA]. 2 145 26.978 T 23-10-2018 IPR022892 Ribonuclease HI GO:0004523 CDG62_13535 dd409bc0e3ba723b4e656029adcba602 471 Gene3D G3DSA:3.30.420.10 243 419 8.0E-48 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_16205 9573a2785eb5a601dfde737530698cae 103 Gene3D G3DSA:1.25.40.20 8 101 2.4E-19 T 23-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDG62_16205 9573a2785eb5a601dfde737530698cae 103 Pfam PF12796 Ankyrin repeats (3 copies) 28 100 4.2E-11 T 23-10-2018 IPR020683 Ankyrin repeat-containing domain CDG62_16205 9573a2785eb5a601dfde737530698cae 103 SMART SM00248 49 78 5.4E-5 T 23-10-2018 IPR002110 Ankyrin repeat GO:0005515 CDG62_16205 9573a2785eb5a601dfde737530698cae 103 SUPERFAMILY SSF48403 20 101 1.71E-17 T 23-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDG62_18300 a53252b81f0f722337b986262766922c 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG62_18300 a53252b81f0f722337b986262766922c 559 SUPERFAMILY SSF56801 21 558 1.14E-152 T 23-10-2018 CDG62_18300 a53252b81f0f722337b986262766922c 559 Pfam PF00501 AMP-binding enzyme 31 466 1.5E-111 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG62_18300 a53252b81f0f722337b986262766922c 559 Gene3D G3DSA:3.30.300.310 463 559 1.3E-32 T 23-10-2018 CDG62_18300 a53252b81f0f722337b986262766922c 559 Gene3D G3DSA:3.40.50.12780 13 462 3.2E-117 T 23-10-2018 CDG62_18300 a53252b81f0f722337b986262766922c 559 Pfam PF13193 AMP-binding enzyme C-terminal domain 475 549 6.8E-19 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG62_10090 fb4a5113cbb145e8deddd09b89c27b3b 170 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 23-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CDG62_10090 fb4a5113cbb145e8deddd09b89c27b3b 170 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.6 T 23-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CDG62_10090 fb4a5113cbb145e8deddd09b89c27b3b 170 Pfam PF17209 Hfq protein 7 68 9.1E-31 T 23-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CDG62_10090 fb4a5113cbb145e8deddd09b89c27b3b 170 SUPERFAMILY SSF50182 7 67 3.07E-23 T 23-10-2018 IPR010920 LSM domain superfamily CDG62_10090 fb4a5113cbb145e8deddd09b89c27b3b 170 Gene3D G3DSA:2.30.30.100 1 69 1.4E-31 T 23-10-2018 CDG62_09170 9d6b0dd1fd9a6156aeafb3af2cfcaa46 546 Pfam PF06418 CTP synthase N-terminus 4 264 1.8E-118 T 23-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CDG62_09170 9d6b0dd1fd9a6156aeafb3af2cfcaa46 546 SUPERFAMILY SSF52540 1 267 2.04E-114 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_09170 9d6b0dd1fd9a6156aeafb3af2cfcaa46 546 SUPERFAMILY SSF52317 290 543 7.37E-84 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_09170 9d6b0dd1fd9a6156aeafb3af2cfcaa46 546 Gene3D G3DSA:3.40.50.880 287 546 3.3E-100 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_09170 9d6b0dd1fd9a6156aeafb3af2cfcaa46 546 Gene3D G3DSA:3.40.50.300 1 285 1.2E-122 T 23-10-2018 CDG62_09170 9d6b0dd1fd9a6156aeafb3af2cfcaa46 546 Pfam PF00117 Glutamine amidotransferase class-I 302 537 4.2E-58 T 23-10-2018 IPR017926 Glutamine amidotransferase CDG62_09170 9d6b0dd1fd9a6156aeafb3af2cfcaa46 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 537 5.3E-241 T 23-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CDG62_09170 9d6b0dd1fd9a6156aeafb3af2cfcaa46 546 Hamap MF_01227 CTP synthase [pyrG]. 2 542 49.459 T 23-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CDG62_11735 404e1539f3dfe7b1437c6ea07d5774f8 310 SUPERFAMILY SSF46689 258 306 2.91E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_11735 404e1539f3dfe7b1437c6ea07d5774f8 310 SMART SM00342 221 304 3.8E-36 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_11735 404e1539f3dfe7b1437c6ea07d5774f8 310 SUPERFAMILY SSF46689 205 256 5.38E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_11735 404e1539f3dfe7b1437c6ea07d5774f8 310 Pfam PF12852 Cupin 2 190 3.0E-26 T 23-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain CDG62_11735 404e1539f3dfe7b1437c6ea07d5774f8 310 Gene3D G3DSA:1.10.10.60 200 309 4.5E-31 T 23-10-2018 CDG62_11735 404e1539f3dfe7b1437c6ea07d5774f8 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 258 300 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDG62_11735 404e1539f3dfe7b1437c6ea07d5774f8 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 273 288 3.7E-7 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_11735 404e1539f3dfe7b1437c6ea07d5774f8 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 288 304 3.7E-7 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_11735 404e1539f3dfe7b1437c6ea07d5774f8 310 Gene3D G3DSA:2.60.120.10 34 93 9.2E-6 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG62_11735 404e1539f3dfe7b1437c6ea07d5774f8 310 Pfam PF12833 Helix-turn-helix domain 227 305 3.0E-22 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_11735 404e1539f3dfe7b1437c6ea07d5774f8 310 SUPERFAMILY SSF51182 38 91 6.37E-6 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG62_18845 079771837d0dedb28861aef88b4bb186 456 Gene3D G3DSA:3.40.120.10 253 371 2.1E-33 T 23-10-2018 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 Gene3D G3DSA:3.40.120.10 170 252 1.8E-27 T 23-10-2018 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 256 1.5E-19 T 23-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 438 1.8E-10 T 23-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 368 1.7E-23 T 23-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 Gene3D G3DSA:3.40.120.10 2 146 9.5E-50 T 23-10-2018 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 SUPERFAMILY SSF53738 151 259 8.63E-25 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 23-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 SUPERFAMILY SSF53738 261 367 7.06E-31 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 SUPERFAMILY SSF53738 3 175 1.41E-36 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 SUPERFAMILY SSF55957 370 455 4.53E-19 T 23-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 1.6E-28 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 1.6E-28 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 1.6E-28 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 1.6E-28 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 Gene3D G3DSA:3.30.310.50 372 456 6.7E-26 T 23-10-2018 CDG62_18845 079771837d0dedb28861aef88b4bb186 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 134 3.5E-32 T 23-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_11860 ffc6a9246af8cab3c187f91d019b7c9a 254 Gene3D G3DSA:1.20.1050.10 126 218 1.5E-8 T 23-10-2018 CDG62_11860 ffc6a9246af8cab3c187f91d019b7c9a 254 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 4.9E-16 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG62_11860 ffc6a9246af8cab3c187f91d019b7c9a 254 Gene3D G3DSA:3.40.30.10 1 101 2.3E-15 T 23-10-2018 CDG62_11860 ffc6a9246af8cab3c187f91d019b7c9a 254 SUPERFAMILY SSF52833 1 89 1.27E-18 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_11860 ffc6a9246af8cab3c187f91d019b7c9a 254 Pfam PF14497 Glutathione S-transferase, C-terminal domain 140 213 2.0E-5 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal CDG62_11860 ffc6a9246af8cab3c187f91d019b7c9a 254 SUPERFAMILY SSF47616 135 205 6.26E-10 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG62_02345 498f17ac05888f117d501bb8a833bbd3 481 SUPERFAMILY SSF53335 3 364 2.88E-50 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_02345 498f17ac05888f117d501bb8a833bbd3 481 Pfam PF01555 DNA methylase 3 349 1.4E-45 T 23-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CDG62_02345 498f17ac05888f117d501bb8a833bbd3 481 PIRSF PIRSF015855 2 478 1.8E-88 T 23-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CDG62_02345 498f17ac05888f117d501bb8a833bbd3 481 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 29 48 1.7E-14 T 23-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CDG62_02345 498f17ac05888f117d501bb8a833bbd3 481 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 315 329 1.7E-14 T 23-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CDG62_02345 498f17ac05888f117d501bb8a833bbd3 481 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 292 314 1.7E-14 T 23-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 Gene3D G3DSA:3.30.70.270 424 593 3.5E-41 T 23-10-2018 CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 Gene3D G3DSA:3.20.20.450 602 850 7.4E-94 T 23-10-2018 IPR035919 EAL domain superfamily CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 Pfam PF00563 EAL domain 606 840 3.8E-73 T 23-10-2018 IPR001633 EAL domain CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 SUPERFAMILY SSF55781 22 173 9.6E-16 T 23-10-2018 CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 SMART SM00086 250 291 3.5 T 23-10-2018 IPR001610 PAC motif CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 SMART SM00086 373 415 1.5E-4 T 23-10-2018 IPR001610 PAC motif CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 SUPERFAMILY SSF55785 190 299 1.15E-16 T 23-10-2018 IPR035965 PAS domain superfamily CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 179 298 3.3E-19 T 23-10-2018 IPR000014 PAS domain CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 295 417 4.5E-19 T 23-10-2018 IPR000014 PAS domain CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 Pfam PF13426 PAS domain 190 289 6.2E-9 T 23-10-2018 IPR000014 PAS domain CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 Pfam PF13426 PAS domain 309 414 2.0E-20 T 23-10-2018 IPR000014 PAS domain CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 Pfam PF13185 GAF domain 21 166 1.5E-10 T 23-10-2018 IPR003018 GAF domain GO:0005515 CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 SMART SM00267 415 587 4.1E-39 T 23-10-2018 IPR000160 GGDEF domain CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 Gene3D G3DSA:3.30.450.20 299 423 2.0E-31 T 23-10-2018 CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 SMART SM00091 299 367 5.0E-8 T 23-10-2018 IPR000014 PAS domain CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 SMART SM00091 179 245 1.2E-5 T 23-10-2018 IPR000014 PAS domain CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 SMART SM00052 599 845 1.2E-115 T 23-10-2018 IPR001633 EAL domain CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 SUPERFAMILY SSF141868 606 850 9.68E-87 T 23-10-2018 IPR035919 EAL domain superfamily CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 424 585 1.2E-30 T 23-10-2018 IPR000160 GGDEF domain CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 SUPERFAMILY SSF55073 432 588 8.63E-35 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 Gene3D G3DSA:3.30.450.40 7 176 2.2E-15 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 Pfam PF00990 Diguanylate cyclase, GGDEF domain 428 583 1.6E-34 T 23-10-2018 IPR000160 GGDEF domain CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 SUPERFAMILY SSF55785 306 414 2.26E-22 T 23-10-2018 IPR035965 PAS domain superfamily CDG62_15675 c274d40f376cfab478bfc7d95f971959 856 Gene3D G3DSA:3.30.450.20 186 298 7.6E-18 T 23-10-2018 CDG62_03815 65019faecb7837d8ae38ad629834019d 164 Pfam PF01613 Flavin reductase like domain 12 159 1.7E-33 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CDG62_03815 65019faecb7837d8ae38ad629834019d 164 Gene3D G3DSA:2.30.110.10 2 163 2.6E-46 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CDG62_03815 65019faecb7837d8ae38ad629834019d 164 SMART SM00903 12 157 5.3E-54 T 23-10-2018 IPR002563 Flavin reductase like domain GO:0010181 CDG62_03815 65019faecb7837d8ae38ad629834019d 164 SUPERFAMILY SSF50475 7 160 2.11E-47 T 23-10-2018 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 Gene3D G3DSA:1.10.1240.10 650 738 1.5E-39 T 23-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 SUPERFAMILY SSF56507 909 1224 2.35E-115 T 23-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 Pfam PF02607 B12 binding domain 660 733 1.5E-23 T 23-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 TIGRFAM TIGR02082 metH: methionine synthase 12 1193 0.0 T 23-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 Pfam PF02310 B12 binding domain 749 842 4.7E-18 T 23-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 Gene3D G3DSA:1.10.288.10 938 1093 9.3E-126 T 23-10-2018 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 Gene3D G3DSA:3.20.20.330 2 336 6.8E-128 T 23-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 SMART SM01018 658 741 6.4E-43 T 23-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 SUPERFAMILY SSF82282 6 396 8.5E-117 T 23-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 Gene3D G3DSA:3.10.196.10 914 1223 9.3E-126 T 23-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 SUPERFAMILY SSF47644 653 740 9.94E-28 T 23-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 Gene3D G3DSA:3.40.50.280 744 897 9.8E-55 T 23-10-2018 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 SUPERFAMILY SSF52242 744 895 6.54E-45 T 23-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 Gene3D G3DSA:3.20.20.20 337 645 1.0E-130 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 PIRSF PIRSF000381 1 1196 0.0 T 23-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 SUPERFAMILY SSF51717 353 621 2.22E-89 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 Pfam PF02574 Homocysteine S-methyltransferase 16 322 1.1E-78 T 23-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1209 1.4E-113 T 23-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_14205 eb7bf8d066ce71e3b258534f4c83cc99 1228 Pfam PF00809 Pterin binding enzyme 357 595 2.4E-55 T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_17550 9036abfa9fccfba3dcaf9828092d963f 1226 SUPERFAMILY SSF52540 3 408 8.85E-59 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17550 9036abfa9fccfba3dcaf9828092d963f 1226 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 3 893 1.5E-177 T 23-10-2018 CDG62_17550 9036abfa9fccfba3dcaf9828092d963f 1226 SUPERFAMILY SSF52980 917 1220 2.9E-36 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG62_17550 9036abfa9fccfba3dcaf9828092d963f 1226 Gene3D G3DSA:3.40.50.10930 2 100 6.8E-11 T 23-10-2018 CDG62_17550 9036abfa9fccfba3dcaf9828092d963f 1226 SUPERFAMILY SSF52540 418 902 1.67E-49 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17550 9036abfa9fccfba3dcaf9828092d963f 1226 Gene3D G3DSA:3.40.50.300 397 894 5.2E-112 T 23-10-2018 CDG62_17550 9036abfa9fccfba3dcaf9828092d963f 1226 PIRSF PIRSF000980 2 1216 6.0E-153 T 23-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CDG62_17550 9036abfa9fccfba3dcaf9828092d963f 1226 Gene3D G3DSA:3.40.50.10930 184 384 8.3E-36 T 23-10-2018 CDG62_17550 9036abfa9fccfba3dcaf9828092d963f 1226 Gene3D G3DSA:1.10.486.10 524 744 5.2E-112 T 23-10-2018 CDG62_17550 9036abfa9fccfba3dcaf9828092d963f 1226 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 2 1224 13.956 T 23-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CDG62_17460 1f5da1115c9089bce949b05a6bd12d76 519 Gene3D G3DSA:3.60.110.10 226 481 2.7E-14 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDG62_17460 1f5da1115c9089bce949b05a6bd12d76 519 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 20 496 21.871 T 23-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CDG62_17460 1f5da1115c9089bce949b05a6bd12d76 519 Pfam PF00795 Carbon-nitrogen hydrolase 228 476 1.2E-31 T 23-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CDG62_17460 1f5da1115c9089bce949b05a6bd12d76 519 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 73 458 3.5E-91 T 23-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CDG62_17460 1f5da1115c9089bce949b05a6bd12d76 519 SUPERFAMILY SSF56317 224 490 1.2E-44 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDG62_15210 f8d1013a104f8da469ed22624401f856 343 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 8.4E-142 T 23-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CDG62_15210 f8d1013a104f8da469ed22624401f856 343 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 3.3E-149 T 23-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CDG62_15210 f8d1013a104f8da469ed22624401f856 343 Gene3D G3DSA:2.40.40.20 274 338 1.2E-11 T 23-10-2018 CDG62_15210 f8d1013a104f8da469ed22624401f856 343 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 4.6E-159 T 23-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CDG62_15210 f8d1013a104f8da469ed22624401f856 343 Gene3D G3DSA:3.40.630.30 1 272 1.5E-116 T 23-10-2018 CDG62_15210 f8d1013a104f8da469ed22624401f856 343 SUPERFAMILY SSF55729 1 337 1.59E-129 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_07850 429c41c2b4d51239dc58de80d4c27c2c 331 Pfam PF00591 Glycosyl transferase family, a/b domain 108 325 3.9E-12 T 23-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG62_07850 429c41c2b4d51239dc58de80d4c27c2c 331 Pfam PF02885 Glycosyl transferase family, helical bundle domain 21 80 1.1E-15 T 23-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG62_07850 429c41c2b4d51239dc58de80d4c27c2c 331 SUPERFAMILY SSF47648 22 82 7.06E-16 T 23-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG62_07850 429c41c2b4d51239dc58de80d4c27c2c 331 Gene3D G3DSA:1.20.970.10 14 82 7.0E-26 T 23-10-2018 CDG62_07850 429c41c2b4d51239dc58de80d4c27c2c 331 Gene3D G3DSA:3.40.1030.10 84 331 1.1E-59 T 23-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG62_07850 429c41c2b4d51239dc58de80d4c27c2c 331 SUPERFAMILY SSF52418 86 329 4.06E-59 T 23-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 CDG62_07995 127f3183ed9caf4edb97880427634002 135 Gene3D G3DSA:3.30.70.920 56 134 7.4E-11 T 23-10-2018 CDG62_07995 127f3183ed9caf4edb97880427634002 135 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 3.0E-6 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_07995 127f3183ed9caf4edb97880427634002 135 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 3.0E-6 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_07995 127f3183ed9caf4edb97880427634002 135 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 3.0E-6 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_07995 127f3183ed9caf4edb97880427634002 135 SMART SM00344 6 106 1.1E-18 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG62_07995 127f3183ed9caf4edb97880427634002 135 SUPERFAMILY SSF54909 63 125 1.21E-7 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_07995 127f3183ed9caf4edb97880427634002 135 Pfam PF01037 Lrp/AsnC ligand binding domain 66 118 1.9E-6 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG62_07995 127f3183ed9caf4edb97880427634002 135 SUPERFAMILY SSF46785 6 61 2.51E-11 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_07995 127f3183ed9caf4edb97880427634002 135 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 52 3.9E-10 T 23-10-2018 CDG62_07995 127f3183ed9caf4edb97880427634002 135 Gene3D G3DSA:1.10.10.10 2 55 3.9E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_16045 fda6027f57e1af3a550cd8ef5440dcf3 308 SUPERFAMILY SSF103515 200 307 3.4E-5 T 23-10-2018 IPR036709 Autotransporter beta-domain superfamily CDG62_16045 fda6027f57e1af3a550cd8ef5440dcf3 308 Pfam PF05275 Copper resistance protein B precursor (CopB) 96 308 6.1E-52 T 23-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 CDG62_12785 29e907649c742ee4280934b524bd0d75 408 Pfam PF00155 Aminotransferase class I and II 32 385 3.4E-73 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG62_12785 29e907649c742ee4280934b524bd0d75 408 Gene3D G3DSA:3.90.1150.10 27 387 2.9E-133 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_12785 29e907649c742ee4280934b524bd0d75 408 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 23-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CDG62_12785 29e907649c742ee4280934b524bd0d75 408 Gene3D G3DSA:3.40.640.10 64 286 2.9E-133 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_12785 29e907649c742ee4280934b524bd0d75 408 SUPERFAMILY SSF53383 4 392 3.4E-116 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_00720 c4b6fb86d0a9181a194bc5a54050e415 173 ProSitePatterns PS01331 Thymidylate kinase signature. 72 84 - T 23-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CDG62_00720 c4b6fb86d0a9181a194bc5a54050e415 173 SUPERFAMILY SSF52540 1 171 1.48E-31 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00720 c4b6fb86d0a9181a194bc5a54050e415 173 Gene3D G3DSA:3.40.50.300 2 173 1.7E-31 T 23-10-2018 CDG62_00720 c4b6fb86d0a9181a194bc5a54050e415 173 Pfam PF02223 Thymidylate kinase 7 37 1.5E-4 T 23-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CDG62_00720 c4b6fb86d0a9181a194bc5a54050e415 173 Pfam PF02223 Thymidylate kinase 50 167 8.2E-16 T 23-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 Pfam PF00154 recA bacterial DNA recombination protein 7 268 2.5E-148 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 Gene3D G3DSA:3.30.250.10 269 327 5.9E-25 T 23-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 PRINTS PR00142 RecA protein signature 243 272 6.7E-83 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 PRINTS PR00142 RecA protein signature 297 314 6.7E-83 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 PRINTS PR00142 RecA protein signature 210 238 6.7E-83 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 PRINTS PR00142 RecA protein signature 165 194 6.7E-83 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 PRINTS PR00142 RecA protein signature 93 122 6.7E-83 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 PRINTS PR00142 RecA protein signature 127 156 6.7E-83 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 Gene3D G3DSA:3.40.50.300 26 267 5.2E-85 T 23-10-2018 CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 Hamap MF_00268 Protein RecA [recA]. 5 329 51.807 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 ProSitePatterns PS00321 recA signature. 213 221 - T 23-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 SMART SM00382 57 228 1.1E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 5.3E-172 T 23-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 SUPERFAMILY SSF52540 3 267 1.74E-68 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_09060 20c69686ed3e70099f52ad486ea41b30 347 SUPERFAMILY SSF54752 269 325 7.85E-20 T 23-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CDG62_15625 1e7702b1d49adf1844fa8cb750ca07cd 507 Gene3D G3DSA:3.40.50.620 5 229 1.9E-121 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_15625 1e7702b1d49adf1844fa8cb750ca07cd 507 Gene3D G3DSA:1.10.10.1710 443 507 2.5E-21 T 23-10-2018 CDG62_15625 1e7702b1d49adf1844fa8cb750ca07cd 507 SUPERFAMILY SSF48173 230 488 3.01E-62 T 23-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 CDG62_15625 1e7702b1d49adf1844fa8cb750ca07cd 507 Gene3D G3DSA:1.10.579.10 322 442 2.8E-53 T 23-10-2018 CDG62_15625 1e7702b1d49adf1844fa8cb750ca07cd 507 Gene3D G3DSA:1.25.40.80 132 318 1.9E-121 T 23-10-2018 CDG62_15625 1e7702b1d49adf1844fa8cb750ca07cd 507 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 5 227 9.7E-74 T 23-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein CDG62_00885 33b5936e5ff50835cfb023159ae08954 109 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 3.2E-35 T 23-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CDG62_00885 33b5936e5ff50835cfb023159ae08954 109 SUPERFAMILY SSF54913 4 104 3.04E-36 T 23-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDG62_00885 33b5936e5ff50835cfb023159ae08954 109 Gene3D G3DSA:3.30.70.120 2 108 4.8E-39 T 23-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDG62_12430 33b5936e5ff50835cfb023159ae08954 109 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 3.2E-35 T 23-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CDG62_12430 33b5936e5ff50835cfb023159ae08954 109 SUPERFAMILY SSF54913 4 104 3.04E-36 T 23-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDG62_12430 33b5936e5ff50835cfb023159ae08954 109 Gene3D G3DSA:3.30.70.120 2 108 4.8E-39 T 23-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDG62_06640 90170204f1b2f804fa94f6c8d63ec5e8 256 Gene3D G3DSA:3.90.640.20 155 241 2.8E-18 T 23-10-2018 IPR037126 PdaC/RsiV-like superfamily CDG62_06640 90170204f1b2f804fa94f6c8d63ec5e8 256 Gene3D G3DSA:3.30.565.40 45 153 2.3E-7 T 23-10-2018 CDG62_06640 90170204f1b2f804fa94f6c8d63ec5e8 256 Pfam PF11738 Protein of unknown function (DUF3298) 185 226 3.9E-9 T 23-10-2018 IPR021729 Domain of unknown function DUF3298 CDG62_06950 fe2c7819901539779bace306f04c5185 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 387 42.861 T 23-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG62_06950 fe2c7819901539779bace306f04c5185 388 SUPERFAMILY SSF52210 240 386 5.89E-53 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDG62_06950 fe2c7819901539779bace306f04c5185 388 Gene3D G3DSA:3.30.470.20 1 235 1.0E-89 T 23-10-2018 CDG62_06950 fe2c7819901539779bace306f04c5185 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 258 282 - T 23-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDG62_06950 fe2c7819901539779bace306f04c5185 388 Gene3D G3DSA:3.30.1490.20 21 105 1.0E-89 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDG62_06950 fe2c7819901539779bace306f04c5185 388 SUPERFAMILY SSF56059 1 239 2.36E-79 T 23-10-2018 CDG62_06950 fe2c7819901539779bace306f04c5185 388 Pfam PF08442 ATP-grasp domain 2 203 1.4E-78 T 23-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG62_06950 fe2c7819901539779bace306f04c5185 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 386 3.5E-160 T 23-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG62_06950 fe2c7819901539779bace306f04c5185 388 Pfam PF00549 CoA-ligase 263 382 1.7E-24 T 23-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDG62_06950 fe2c7819901539779bace306f04c5185 388 PIRSF PIRSF001554 1 388 7.5E-151 T 23-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG62_06950 fe2c7819901539779bace306f04c5185 388 Gene3D G3DSA:3.40.50.261 241 388 1.7E-54 T 23-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CDG62_11255 74748c8fa74b1e36bf83c69bbf7bfc3d 453 Gene3D G3DSA:3.30.470.20 87 431 1.3E-145 T 23-10-2018 CDG62_11255 74748c8fa74b1e36bf83c69bbf7bfc3d 453 SUPERFAMILY SSF56059 83 345 4.24E-68 T 23-10-2018 CDG62_11255 74748c8fa74b1e36bf83c69bbf7bfc3d 453 SUPERFAMILY SSF52440 1 113 1.29E-47 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG62_11255 74748c8fa74b1e36bf83c69bbf7bfc3d 453 Gene3D G3DSA:3.40.50.20 1 85 1.9E-34 T 23-10-2018 CDG62_11255 74748c8fa74b1e36bf83c69bbf7bfc3d 453 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 443 4.1E-206 T 23-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CDG62_11255 74748c8fa74b1e36bf83c69bbf7bfc3d 453 Gene3D G3DSA:3.30.1490.20 131 201 1.3E-145 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDG62_11255 74748c8fa74b1e36bf83c69bbf7bfc3d 453 SMART SM00878 334 440 4.4E-59 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_11255 74748c8fa74b1e36bf83c69bbf7bfc3d 453 Pfam PF02785 Biotin carboxylase C-terminal domain 334 440 3.9E-37 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_11255 74748c8fa74b1e36bf83c69bbf7bfc3d 453 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_11255 74748c8fa74b1e36bf83c69bbf7bfc3d 453 SUPERFAMILY SSF51246 329 442 1.41E-40 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDG62_11255 74748c8fa74b1e36bf83c69bbf7bfc3d 453 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_11255 74748c8fa74b1e36bf83c69bbf7bfc3d 453 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 320 1.9E-74 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_11255 74748c8fa74b1e36bf83c69bbf7bfc3d 453 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.6E-44 T 23-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_15640 d771c9c3dd5ade30a0e86334fe80f1f9 133 ProSitePatterns PS00769 Transthyretin signature 2. 116 128 - T 23-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_15640 d771c9c3dd5ade30a0e86334fe80f1f9 133 SUPERFAMILY SSF49472 19 133 2.88E-38 T 23-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_15640 d771c9c3dd5ade30a0e86334fe80f1f9 133 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 22 132 1.3E-40 T 23-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CDG62_15640 d771c9c3dd5ade30a0e86334fe80f1f9 133 SMART SM00095 19 133 0.0011 T 23-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_15640 d771c9c3dd5ade30a0e86334fe80f1f9 133 Pfam PF00576 HIUase/Transthyretin family 24 132 8.7E-36 T 23-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_15640 d771c9c3dd5ade30a0e86334fe80f1f9 133 Gene3D G3DSA:2.60.40.180 14 132 2.4E-38 T 23-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_15640 d771c9c3dd5ade30a0e86334fe80f1f9 133 PRINTS PR00189 Transthyretin signature 111 133 1.6E-8 T 23-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_15640 d771c9c3dd5ade30a0e86334fe80f1f9 133 PRINTS PR00189 Transthyretin signature 23 43 1.6E-8 T 23-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_18285 83898ce40c4e654d424ae2afbda8da62 174 Gene3D G3DSA:3.90.80.10 1 174 4.4E-72 T 23-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDG62_18285 83898ce40c4e654d424ae2afbda8da62 174 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 23-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDG62_18285 83898ce40c4e654d424ae2afbda8da62 174 Pfam PF00719 Inorganic pyrophosphatase 18 173 7.1E-53 T 23-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDG62_18285 83898ce40c4e654d424ae2afbda8da62 174 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.113 T 23-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDG62_18285 83898ce40c4e654d424ae2afbda8da62 174 SUPERFAMILY SSF50324 3 173 2.49E-67 T 23-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 Pfam PF04851 Type III restriction enzyme, res subunit 17 99 8.3E-11 T 23-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 Pfam PF12344 Ultra-violet resistance protein B 553 593 7.9E-21 T 23-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 5 670 42.991 T 23-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 SUPERFAMILY SSF52540 5 416 5.68E-143 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 Gene3D G3DSA:3.40.50.300 276 415 3.4E-51 T 23-10-2018 CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 7 668 0.0 T 23-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 Pfam PF00271 Helicase conserved C-terminal domain 442 545 1.1E-17 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 Gene3D G3DSA:4.10.860.10 613 673 1.9E-9 T 23-10-2018 CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 SMART SM00487 11 427 9.4E-28 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 Gene3D G3DSA:3.40.50.300 1 236 2.1E-76 T 23-10-2018 CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 SUPERFAMILY SSF46600 634 671 1.31E-10 T 23-10-2018 IPR036876 UVR domain superfamily CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 Pfam PF02151 UvrB/uvrC motif 638 670 2.6E-9 T 23-10-2018 IPR001943 UVR domain GO:0005515 CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 SMART SM00490 461 547 1.1E-21 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 SUPERFAMILY SSF52540 35 587 4.36E-38 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12760 d9c21e77d5c051c5b23c9ccd557d608a 673 Gene3D G3DSA:3.40.50.300 416 590 7.8E-50 T 23-10-2018 CDG62_11720 32173361ed41056e64480825583c8d72 594 Gene3D G3DSA:1.10.510.40 388 584 1.5E-14 T 23-10-2018 CDG62_11720 32173361ed41056e64480825583c8d72 594 Pfam PF06276 Ferric iron reductase FhuF-like transporter 409 567 1.9E-35 T 23-10-2018 IPR022770 Ferric iron reductase FhuF domain CDG62_11720 32173361ed41056e64480825583c8d72 594 Pfam PF04183 IucA / IucC family 144 377 5.0E-53 T 23-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 CDG62_17315 080139859e453ec52967c82c45dea794 91 Pfam PF04024 PspC domain 6 62 1.0E-19 T 23-10-2018 IPR007168 Phage shock protein, PspC, N-terminal CDG62_08430 7bdda976f6999f037a439eef56c1dcd5 342 Pfam PF13353 4Fe-4S single cluster domain 29 133 3.4E-11 T 23-10-2018 CDG62_08430 7bdda976f6999f037a439eef56c1dcd5 342 SUPERFAMILY SSF102114 14 282 2.49E-66 T 23-10-2018 CDG62_08430 7bdda976f6999f037a439eef56c1dcd5 342 Pfam PF06463 Molybdenum Cofactor Synthesis C 192 320 3.5E-28 T 23-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDG62_08430 7bdda976f6999f037a439eef56c1dcd5 342 Pfam PF04055 Radical SAM superfamily 26 186 1.2E-26 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG62_08430 7bdda976f6999f037a439eef56c1dcd5 342 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 13 342 37.166 T 23-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDG62_08430 7bdda976f6999f037a439eef56c1dcd5 342 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 14 342 2.0E-114 T 23-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDG62_08430 7bdda976f6999f037a439eef56c1dcd5 342 SMART SM00729 22 225 9.8E-5 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG62_08430 7bdda976f6999f037a439eef56c1dcd5 342 Gene3D G3DSA:3.20.20.70 10 342 5.5E-90 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 Gene3D G3DSA:1.10.8.60 311 385 6.2E-22 T 23-10-2018 CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 Pfam PF00158 Sigma-54 interaction domain 139 305 1.5E-66 T 23-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 SUPERFAMILY SSF52540 139 381 9.67E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 Gene3D G3DSA:1.10.10.60 405 468 8.7E-15 T 23-10-2018 CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 23-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 23-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 Pfam PF00072 Response regulator receiver domain 7 116 5.8E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 SMART SM00448 5 116 8.6E-30 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 Gene3D G3DSA:3.40.50.2300 6 123 1.5E-31 T 23-10-2018 CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 430 447 1.9E-10 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 447 467 1.9E-10 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 23-10-2018 IPR025944 Sigma-54 interaction domain, conserved site CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 Pfam PF02954 Bacterial regulatory protein, Fis family 424 464 2.4E-15 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 SUPERFAMILY SSF46689 353 467 1.72E-14 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 SMART SM00382 159 302 9.9E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 SUPERFAMILY SSF52172 4 184 1.34E-39 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_18185 ea2e5f4128adf93be4e27f5015576bf3 473 Gene3D G3DSA:3.40.50.300 126 310 8.6E-61 T 23-10-2018 CDG62_09065 0410426afd3186b9ad823ffd6247b528 147 Gene3D G3DSA:3.10.290.10 7 112 3.8E-36 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDG62_09065 0410426afd3186b9ad823ffd6247b528 147 PIRSF PIRSF016821 10 135 3.8E-39 T 23-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 CDG62_09065 0410426afd3186b9ad823ffd6247b528 147 SMART SM00363 13 76 4.4E-10 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_09065 0410426afd3186b9ad823ffd6247b528 147 SUPERFAMILY SSF55174 11 108 4.84E-27 T 23-10-2018 CDG62_09065 0410426afd3186b9ad823ffd6247b528 147 Pfam PF01479 S4 domain 13 58 2.2E-12 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_03455 b1a4f7084fe5fc1957d5fbe5e5e705cb 212 Pfam PF13410 Glutathione S-transferase, C-terminal domain 132 179 1.3E-5 T 23-10-2018 CDG62_03455 b1a4f7084fe5fc1957d5fbe5e5e705cb 212 SUPERFAMILY SSF47616 85 204 1.58E-10 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG62_03455 b1a4f7084fe5fc1957d5fbe5e5e705cb 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 12 78 9.2E-11 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG62_03455 b1a4f7084fe5fc1957d5fbe5e5e705cb 212 SUPERFAMILY SSF52833 5 88 3.68E-17 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_03455 b1a4f7084fe5fc1957d5fbe5e5e705cb 212 Gene3D G3DSA:1.20.1050.10 85 197 1.0E-55 T 23-10-2018 CDG62_03455 b1a4f7084fe5fc1957d5fbe5e5e705cb 212 Gene3D G3DSA:3.40.30.10 4 204 1.0E-55 T 23-10-2018 CDG62_05560 aba2b8ac8619078d689afe0b28d79328 451 Pfam PF00324 Amino acid permease 16 420 2.1E-109 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG62_05560 aba2b8ac8619078d689afe0b28d79328 451 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG62_05560 aba2b8ac8619078d689afe0b28d79328 451 PIRSF PIRSF006060 2 451 1.2E-78 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_05560 aba2b8ac8619078d689afe0b28d79328 451 Gene3D G3DSA:1.20.1740.10 7 451 4.1E-62 T 23-10-2018 CDG62_19095 75c1da8fa71efb56abc616e6473762c5 346 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 29 332 3.7E-16 T 23-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 CDG62_19095 75c1da8fa71efb56abc616e6473762c5 346 SUPERFAMILY SSF51197 24 331 1.33E-24 T 23-10-2018 CDG62_14715 363c8c1070f0f5eedd7029dab43abe90 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 437 2.6E-17 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_14715 363c8c1070f0f5eedd7029dab43abe90 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 283 1.7E-9 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_14715 363c8c1070f0f5eedd7029dab43abe90 438 SUPERFAMILY SSF55874 274 436 1.01E-31 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_14715 363c8c1070f0f5eedd7029dab43abe90 438 SMART SM00387 330 438 1.2E-23 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_14715 363c8c1070f0f5eedd7029dab43abe90 438 SMART SM00388 222 284 9.5E-10 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_14715 363c8c1070f0f5eedd7029dab43abe90 438 Gene3D G3DSA:3.30.565.10 291 438 3.6E-30 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_14715 363c8c1070f0f5eedd7029dab43abe90 438 Gene3D G3DSA:1.10.287.130 172 284 1.3E-16 T 23-10-2018 CDG62_14715 363c8c1070f0f5eedd7029dab43abe90 438 SUPERFAMILY SSF47384 207 283 9.22E-12 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG62_14715 363c8c1070f0f5eedd7029dab43abe90 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 6.5E-6 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_14715 363c8c1070f0f5eedd7029dab43abe90 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 6.5E-6 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_04975 3c708a9cdeb42eac04e7e182b52c0665 730 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 80 730 3.8E-98 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDG62_04975 3c708a9cdeb42eac04e7e182b52c0665 730 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 713 730 - T 23-10-2018 IPR010917 TonB-dependent receptor, conserved site CDG62_04975 3c708a9cdeb42eac04e7e182b52c0665 730 Gene3D G3DSA:2.170.130.10 55 182 1.2E-31 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_04975 3c708a9cdeb42eac04e7e182b52c0665 730 Pfam PF00593 TonB dependent receptor 271 729 6.0E-44 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_04975 3c708a9cdeb42eac04e7e182b52c0665 730 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 172 2.1E-11 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_04975 3c708a9cdeb42eac04e7e182b52c0665 730 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 50 - T 23-10-2018 IPR010916 TonB box, conserved site CDG62_04975 3c708a9cdeb42eac04e7e182b52c0665 730 Gene3D G3DSA:2.40.170.20 185 730 6.7E-149 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_04975 3c708a9cdeb42eac04e7e182b52c0665 730 SUPERFAMILY SSF56935 34 730 8.49E-115 T 23-10-2018 CDG62_08260 c52dbfa7ff5e8a643082f5b34e3e339b 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 77 96 - T 23-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CDG62_08260 c52dbfa7ff5e8a643082f5b34e3e339b 336 Pfam PF01180 Dihydroorotate dehydrogenase 44 330 9.1E-85 T 23-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CDG62_08260 c52dbfa7ff5e8a643082f5b34e3e339b 336 Gene3D G3DSA:3.20.20.70 2 332 4.2E-129 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_08260 c52dbfa7ff5e8a643082f5b34e3e339b 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 289 309 - T 23-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CDG62_08260 c52dbfa7ff5e8a643082f5b34e3e339b 336 SUPERFAMILY SSF51395 1 334 2.09E-103 T 23-10-2018 CDG62_08260 c52dbfa7ff5e8a643082f5b34e3e339b 336 PIRSF PIRSF000164 16 336 1.6E-93 T 23-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CDG62_08260 c52dbfa7ff5e8a643082f5b34e3e339b 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 334 2.4E-126 T 23-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CDG62_08260 c52dbfa7ff5e8a643082f5b34e3e339b 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 333 49.957 T 23-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CDG62_05550 ce664bb4e8c6ccf2a093d1044c825769 550 SUPERFAMILY SSF55874 385 549 3.67E-34 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_05550 ce664bb4e8c6ccf2a093d1044c825769 550 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 440 548 5.7E-17 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_05550 ce664bb4e8c6ccf2a093d1044c825769 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 529 6.4E-6 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_05550 ce664bb4e8c6ccf2a093d1044c825769 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 490 6.4E-6 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_05550 ce664bb4e8c6ccf2a093d1044c825769 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 504 6.4E-6 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_05550 ce664bb4e8c6ccf2a093d1044c825769 550 Pfam PF00512 His Kinase A (phospho-acceptor) domain 331 394 1.1E-10 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_05550 ce664bb4e8c6ccf2a093d1044c825769 550 SUPERFAMILY SSF158472 281 322 4.32E-7 T 23-10-2018 CDG62_05550 ce664bb4e8c6ccf2a093d1044c825769 550 Gene3D G3DSA:3.30.565.10 402 550 4.6E-32 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_05550 ce664bb4e8c6ccf2a093d1044c825769 550 Gene3D G3DSA:1.10.287.130 330 395 9.8E-13 T 23-10-2018 CDG62_05550 ce664bb4e8c6ccf2a093d1044c825769 550 SMART SM00304 278 330 0.0023 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDG62_05550 ce664bb4e8c6ccf2a093d1044c825769 550 SMART SM00387 439 550 1.1E-26 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_05550 ce664bb4e8c6ccf2a093d1044c825769 550 SUPERFAMILY SSF47384 316 396 6.08E-12 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG62_05550 ce664bb4e8c6ccf2a093d1044c825769 550 Gene3D G3DSA:1.20.1480.50 247 329 2.2E-9 T 23-10-2018 CDG62_05550 ce664bb4e8c6ccf2a093d1044c825769 550 SMART SM00388 331 395 3.3E-12 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_05010 226abd5d54ca3dab10def13322fd9da3 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 57.026 T 23-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CDG62_05010 226abd5d54ca3dab10def13322fd9da3 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 154 1.1E-35 T 23-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG62_05010 226abd5d54ca3dab10def13322fd9da3 328 SUPERFAMILY SSF51735 3 157 8.4E-45 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_05010 226abd5d54ca3dab10def13322fd9da3 328 Gene3D G3DSA:3.40.50.720 1 156 1.0E-57 T 23-10-2018 CDG62_05010 226abd5d54ca3dab10def13322fd9da3 328 PIRSF PIRSF000102 1 326 1.9E-63 T 23-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CDG62_05010 226abd5d54ca3dab10def13322fd9da3 328 Gene3D G3DSA:3.90.110.10 157 328 1.1E-62 T 23-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CDG62_05010 226abd5d54ca3dab10def13322fd9da3 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 323 5.3E-33 T 23-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CDG62_05010 226abd5d54ca3dab10def13322fd9da3 328 SUPERFAMILY SSF56327 159 327 3.24E-60 T 23-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CDG62_05010 226abd5d54ca3dab10def13322fd9da3 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 2 322 3.3E-146 T 23-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CDG62_13755 e84b24e47b89d1420fe35cf029e65298 282 Gene3D G3DSA:3.40.50.720 3 282 7.2E-75 T 23-10-2018 CDG62_13755 e84b24e47b89d1420fe35cf029e65298 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 9.7E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_13755 e84b24e47b89d1420fe35cf029e65298 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 9.7E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_13755 e84b24e47b89d1420fe35cf029e65298 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 9.7E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_13755 e84b24e47b89d1420fe35cf029e65298 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 9.7E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_13755 e84b24e47b89d1420fe35cf029e65298 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 9.7E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_13755 e84b24e47b89d1420fe35cf029e65298 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 9.7E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_13755 e84b24e47b89d1420fe35cf029e65298 282 Pfam PF00106 short chain dehydrogenase 9 147 1.3E-24 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_13755 e84b24e47b89d1420fe35cf029e65298 282 SUPERFAMILY SSF51735 4 281 8.49E-56 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_03520 5443bd2538635ec57d1a75a7578e62cd 314 SUPERFAMILY SSF52440 1 121 4.89E-42 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG62_03520 5443bd2538635ec57d1a75a7578e62cd 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 161.624 T 23-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CDG62_03520 5443bd2538635ec57d1a75a7578e62cd 314 Gene3D G3DSA:3.30.1490.20 136 200 5.3E-111 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDG62_03520 5443bd2538635ec57d1a75a7578e62cd 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 296 3.0E-76 T 23-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CDG62_03520 5443bd2538635ec57d1a75a7578e62cd 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 310 1.4E-130 T 23-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CDG62_03520 5443bd2538635ec57d1a75a7578e62cd 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 3.6E-41 T 23-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CDG62_03520 5443bd2538635ec57d1a75a7578e62cd 314 Gene3D G3DSA:3.30.470.20 114 294 5.3E-111 T 23-10-2018 CDG62_03520 5443bd2538635ec57d1a75a7578e62cd 314 Gene3D G3DSA:3.40.50.20 6 113 5.3E-111 T 23-10-2018 CDG62_03520 5443bd2538635ec57d1a75a7578e62cd 314 SUPERFAMILY SSF56059 122 309 1.2E-56 T 23-10-2018 CDG62_08585 590cd15805050365fbb598f9981f5ff2 297 Gene3D G3DSA:1.10.1040.10 190 295 1.2E-18 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDG62_08585 590cd15805050365fbb598f9981f5ff2 297 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 284 2.8E-15 T 23-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDG62_08585 590cd15805050365fbb598f9981f5ff2 297 SUPERFAMILY SSF51735 1 182 1.47E-43 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_08585 590cd15805050365fbb598f9981f5ff2 297 Gene3D G3DSA:3.40.50.720 1 189 4.5E-53 T 23-10-2018 CDG62_08585 590cd15805050365fbb598f9981f5ff2 297 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 181 5.8E-45 T 23-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDG62_08585 590cd15805050365fbb598f9981f5ff2 297 SUPERFAMILY SSF48179 187 289 1.87E-18 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_08585 590cd15805050365fbb598f9981f5ff2 297 PIRSF PIRSF000105 1 297 6.4E-77 T 23-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 CDG62_01845 15d21f7a99d29db4a1d94f5f9dd41d15 191 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 71 4.5E-12 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG62_01845 15d21f7a99d29db4a1d94f5f9dd41d15 191 Gene3D G3DSA:1.20.1050.10 78 180 3.3E-22 T 23-10-2018 CDG62_01845 15d21f7a99d29db4a1d94f5f9dd41d15 191 Gene3D G3DSA:3.40.30.10 3 183 3.3E-22 T 23-10-2018 CDG62_01845 15d21f7a99d29db4a1d94f5f9dd41d15 191 SUPERFAMILY SSF47616 114 187 6.66E-5 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG62_01845 15d21f7a99d29db4a1d94f5f9dd41d15 191 SUPERFAMILY SSF52833 1 78 7.34E-15 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_04530 e19aef2e9e74b66de8bf3bba55d48f69 262 SUPERFAMILY SSF51735 102 259 3.94E-33 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_04530 e19aef2e9e74b66de8bf3bba55d48f69 262 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 260 28.665 T 23-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CDG62_04530 e19aef2e9e74b66de8bf3bba55d48f69 262 SUPERFAMILY SSF53223 2 101 1.04E-28 T 23-10-2018 CDG62_04530 e19aef2e9e74b66de8bf3bba55d48f69 262 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 194 1.9E-12 T 23-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CDG62_04530 e19aef2e9e74b66de8bf3bba55d48f69 262 Gene3D G3DSA:3.40.50.10860 5 253 3.3E-74 T 23-10-2018 CDG62_04530 e19aef2e9e74b66de8bf3bba55d48f69 262 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 3.8E-21 T 23-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CDG62_04530 e19aef2e9e74b66de8bf3bba55d48f69 262 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 259 1.4E-72 T 23-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CDG62_04530 e19aef2e9e74b66de8bf3bba55d48f69 262 Gene3D G3DSA:3.40.50.720 115 234 3.3E-74 T 23-10-2018 CDG62_05175 af7214ae3f0c549aca53f7100749f6c8 149 Pfam PF02556 Preprotein translocase subunit SecB 3 139 2.5E-49 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDG62_05175 af7214ae3f0c549aca53f7100749f6c8 149 Hamap MF_00821 Protein-export protein SecB [secB]. 1 141 30.512 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDG62_05175 af7214ae3f0c549aca53f7100749f6c8 149 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 2 138 1.4E-46 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDG62_05175 af7214ae3f0c549aca53f7100749f6c8 149 SUPERFAMILY SSF54611 3 138 1.37E-44 T 23-10-2018 IPR035958 SecB-like superfamily CDG62_05175 af7214ae3f0c549aca53f7100749f6c8 149 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 119 137 2.8E-31 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDG62_05175 af7214ae3f0c549aca53f7100749f6c8 149 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 69 89 2.8E-31 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDG62_05175 af7214ae3f0c549aca53f7100749f6c8 149 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 10 27 2.8E-31 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDG62_05175 af7214ae3f0c549aca53f7100749f6c8 149 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 93 115 2.8E-31 T 23-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CDG62_05175 af7214ae3f0c549aca53f7100749f6c8 149 Gene3D G3DSA:3.10.420.10 1 149 3.9E-50 T 23-10-2018 IPR035958 SecB-like superfamily CDG62_09840 6d9659a341d58c20a9eb91df47b2ed44 462 SUPERFAMILY SSF118215 29 441 2.75E-97 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG62_09840 6d9659a341d58c20a9eb91df47b2ed44 462 Pfam PF00375 Sodium:dicarboxylate symporter family 29 442 2.9E-103 T 23-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CDG62_09840 6d9659a341d58c20a9eb91df47b2ed44 462 Gene3D G3DSA:1.10.3860.10 19 460 1.2E-108 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG62_09840 6d9659a341d58c20a9eb91df47b2ed44 462 PRINTS PR00173 Glutamate-aspartate symporter signature 233 252 1.5E-24 T 23-10-2018 CDG62_09840 6d9659a341d58c20a9eb91df47b2ed44 462 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 1.5E-24 T 23-10-2018 CDG62_09840 6d9659a341d58c20a9eb91df47b2ed44 462 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.5E-24 T 23-10-2018 CDG62_09840 6d9659a341d58c20a9eb91df47b2ed44 462 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.5E-24 T 23-10-2018 CDG62_09840 6d9659a341d58c20a9eb91df47b2ed44 462 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.5E-24 T 23-10-2018 CDG62_09840 6d9659a341d58c20a9eb91df47b2ed44 462 PRINTS PR00173 Glutamate-aspartate symporter signature 260 279 1.5E-24 T 23-10-2018 CDG62_09840 6d9659a341d58c20a9eb91df47b2ed44 462 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 1.5E-24 T 23-10-2018 CDG62_18530 7acb60524143188e0f65dd59ea94c389 164 Pfam PF01475 Ferric uptake regulator family 35 153 9.9E-10 T 23-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CDG62_18530 7acb60524143188e0f65dd59ea94c389 164 Gene3D G3DSA:3.30.1490.190 106 164 2.6E-14 T 23-10-2018 CDG62_18530 7acb60524143188e0f65dd59ea94c389 164 Gene3D G3DSA:1.10.10.10 17 105 1.4E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_18530 7acb60524143188e0f65dd59ea94c389 164 SUPERFAMILY SSF46785 28 159 1.73E-26 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_05960 d3a0293e44f84006fdece461f980f79e 174 Pfam PF12019 Type II transport protein GspH 46 161 6.9E-11 T 23-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CDG62_05960 d3a0293e44f84006fdece461f980f79e 174 Gene3D G3DSA:3.30.700.10 9 132 2.1E-10 T 23-10-2018 CDG62_05960 d3a0293e44f84006fdece461f980f79e 174 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 1.5E-5 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_05960 d3a0293e44f84006fdece461f980f79e 174 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 21 2.8E-4 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_05960 d3a0293e44f84006fdece461f980f79e 174 SUPERFAMILY SSF54523 9 102 2.51E-14 T 23-10-2018 CDG62_01295 37ca0a0f4826a9e1c56021ca2e9275db 341 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 45 318 1.6E-85 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG62_01295 37ca0a0f4826a9e1c56021ca2e9275db 341 Pfam PF01545 Cation efflux family 50 240 5.6E-48 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG62_01295 37ca0a0f4826a9e1c56021ca2e9275db 341 SUPERFAMILY SSF161111 45 241 1.7E-57 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG62_01295 37ca0a0f4826a9e1c56021ca2e9275db 341 Gene3D G3DSA:1.20.1510.10 45 240 6.3E-45 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG62_10000 abbf9b5cb46f85f637878e616c1bf50f 461 Gene3D G3DSA:1.10.220.70 56 141 6.5E-32 T 23-10-2018 CDG62_10000 abbf9b5cb46f85f637878e616c1bf50f 461 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 443 6.8E-217 T 23-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CDG62_10000 abbf9b5cb46f85f637878e616c1bf50f 461 PIRSF PIRSF018788 1 457 6.4E-231 T 23-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CDG62_10000 abbf9b5cb46f85f637878e616c1bf50f 461 Gene3D G3DSA:2.30.170.30 1 54 5.5E-24 T 23-10-2018 CDG62_10000 abbf9b5cb46f85f637878e616c1bf50f 461 Gene3D G3DSA:3.20.20.70 142 446 4.2E-146 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_18190 bc65cbeada1622a1cac711c7942a16ad 391 SUPERFAMILY SSF52096 50 374 1.01E-61 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_18190 bc65cbeada1622a1cac711c7942a16ad 391 Gene3D G3DSA:3.30.750.44 61 344 5.0E-69 T 23-10-2018 CDG62_18190 bc65cbeada1622a1cac711c7942a16ad 391 SMART SM00245 181 371 1.6E-44 T 23-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CDG62_18190 bc65cbeada1622a1cac711c7942a16ad 391 Gene3D G3DSA:2.30.42.10 110 195 5.0E-69 T 23-10-2018 CDG62_18190 bc65cbeada1622a1cac711c7942a16ad 391 Pfam PF03572 Peptidase family S41 207 365 5.4E-43 T 23-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CDG62_18190 bc65cbeada1622a1cac711c7942a16ad 391 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 63 372 5.6E-68 T 23-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CDG62_18190 bc65cbeada1622a1cac711c7942a16ad 391 Gene3D G3DSA:3.90.226.10 196 365 5.0E-69 T 23-10-2018 CDG62_18190 bc65cbeada1622a1cac711c7942a16ad 391 SUPERFAMILY SSF50156 107 192 2.14E-6 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG62_03805 5904dd209cfd3646039266c87fcedabc 330 PIRSF PIRSF034367 1 325 6.2E-174 T 23-10-2018 IPR015004 Protein of unknown function DUF1852 CDG62_03805 5904dd209cfd3646039266c87fcedabc 330 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 4.7E-172 T 23-10-2018 IPR015004 Protein of unknown function DUF1852 CDG62_07920 3e8e50f91f2f8813651d1dfb0deef2fb 440 Pfam PF00860 Permease family 28 399 8.3E-57 T 23-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CDG62_07920 3e8e50f91f2f8813651d1dfb0deef2fb 440 PIRSF PIRSF005353 2 439 3.0E-187 T 23-10-2018 IPR026033 Purine permease PbuG-like CDG62_05195 4c65808babfa8965830ab9f8011accc0 184 SUPERFAMILY SSF53098 6 180 4.71E-47 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_05195 4c65808babfa8965830ab9f8011accc0 184 Hamap MF_00045 Oligoribonuclease [orn]. 4 182 43.716 T 23-10-2018 IPR022894 Oligoribonuclease GO:0000175 CDG62_05195 4c65808babfa8965830ab9f8011accc0 184 SMART SM00479 8 181 1.2E-20 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG62_05195 4c65808babfa8965830ab9f8011accc0 184 Gene3D G3DSA:3.30.420.10 1 184 2.0E-75 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_05195 4c65808babfa8965830ab9f8011accc0 184 Pfam PF00929 Exonuclease 10 171 1.1E-32 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 Gene3D G3DSA:2.140.10.10 571 796 1.8E-32 T 23-10-2018 CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 165 193 - T 23-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 Pfam PF01011 PQQ enzyme repeat 223 258 3.0E-4 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 Pfam PF01011 PQQ enzyme repeat 360 392 4.8E-5 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 Pfam PF01011 PQQ enzyme repeat 726 763 8.2E-7 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 Pfam PF01011 PQQ enzyme repeat 443 473 3.8E-6 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 409 430 - T 23-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 SUPERFAMILY SSF50998 162 797 5.63E-151 T 23-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 Gene3D G3DSA:2.140.10.10 160 565 3.1E-113 T 23-10-2018 CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 SMART SM00564 344 385 0.0049 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 SMART SM00564 414 463 81.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 SMART SM00564 218 249 6.5E-7 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 SMART SM00564 720 753 7.6 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 SMART SM00564 287 319 200.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_05930 309fbc3738eaac012592fe9dbaecbc92 800 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 13 797 0.0 T 23-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 33.664 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 SUPERFAMILY SSF55681 242 525 4.59E-100 T 23-10-2018 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 Pfam PF03129 Anticodon binding domain 540 629 5.9E-20 T 23-10-2018 IPR004154 Anticodon-binding CDG62_16420 f46567fb9728c11f07031641686aeb90 640 Pfam PF02824 TGS domain 4 61 2.2E-10 T 23-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 SUPERFAMILY SSF81271 3 61 9.16E-16 T 23-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 Gene3D G3DSA:3.30.980.10 69 221 1.4E-59 T 23-10-2018 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 Gene3D G3DSA:3.40.50.800 531 637 4.8E-28 T 23-10-2018 IPR036621 Anticodon-binding domain superfamily CDG62_16420 f46567fb9728c11f07031641686aeb90 640 Gene3D G3DSA:3.30.930.10 222 530 8.7E-129 T 23-10-2018 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 218 4.8E-14 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 SMART SM00863 169 218 5.5E-20 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 SUPERFAMILY SSF55186 63 240 2.75E-64 T 23-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 Gene3D G3DSA:3.30.54.20 130 186 1.4E-59 T 23-10-2018 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 SUPERFAMILY SSF52954 528 633 8.76E-30 T 23-10-2018 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 629 1.4E-221 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 7.4E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 7.4E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 7.4E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 7.4E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 7.4E-52 T 23-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 528 7.4E-46 T 23-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_16420 f46567fb9728c11f07031641686aeb90 640 Gene3D G3DSA:3.10.20.30 3 63 5.0E-21 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG62_08300 c349c11dd68e8fcbfad6a09541def5d4 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.2E-24 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08300 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 6.2E-15 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08300 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 6.2E-15 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08300 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 6.2E-15 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08300 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 6.2E-15 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08300 c349c11dd68e8fcbfad6a09541def5d4 71 Gene3D G3DSA:1.20.5.1150 16 54 1.2E-20 T 23-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08300 c349c11dd68e8fcbfad6a09541def5d4 71 Pfam PF01165 Ribosomal protein S21 3 55 4.1E-22 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08300 c349c11dd68e8fcbfad6a09541def5d4 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 5.0E-10 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08300 c349c11dd68e8fcbfad6a09541def5d4 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 23-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_08300 c349c11dd68e8fcbfad6a09541def5d4 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.252 T 23-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_14770 ce6fa36102a5fe98f7760f4b8f74d900 450 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG62_14770 ce6fa36102a5fe98f7760f4b8f74d900 450 Gene3D G3DSA:1.20.1740.10 8 450 1.7E-66 T 23-10-2018 CDG62_14770 ce6fa36102a5fe98f7760f4b8f74d900 450 PIRSF PIRSF006060 2 450 2.7E-79 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_14770 ce6fa36102a5fe98f7760f4b8f74d900 450 Pfam PF00324 Amino acid permease 16 445 6.6E-110 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG62_01630 35bbc67f113e7853841a1e9e671a9351 248 Pfam PF00175 Oxidoreductase NAD-binding domain 121 227 3.5E-10 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG62_01630 35bbc67f113e7853841a1e9e671a9351 248 PRINTS PR00406 Cytochrome B5 reductase signature 59 66 6.7E-7 T 23-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CDG62_01630 35bbc67f113e7853841a1e9e671a9351 248 PRINTS PR00406 Cytochrome B5 reductase signature 120 139 6.7E-7 T 23-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CDG62_01630 35bbc67f113e7853841a1e9e671a9351 248 PRINTS PR00406 Cytochrome B5 reductase signature 96 110 6.7E-7 T 23-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CDG62_01630 35bbc67f113e7853841a1e9e671a9351 248 PRINTS PR00406 Cytochrome B5 reductase signature 157 168 6.7E-7 T 23-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 CDG62_01630 35bbc67f113e7853841a1e9e671a9351 248 Gene3D G3DSA:2.40.30.10 9 110 1.7E-19 T 23-10-2018 CDG62_01630 35bbc67f113e7853841a1e9e671a9351 248 SUPERFAMILY SSF63380 6 112 1.29E-22 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG62_01630 35bbc67f113e7853841a1e9e671a9351 248 Gene3D G3DSA:3.40.50.80 111 247 7.0E-20 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_01630 35bbc67f113e7853841a1e9e671a9351 248 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 59 66 2.9E-8 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_01630 35bbc67f113e7853841a1e9e671a9351 248 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 214 222 2.9E-8 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_01630 35bbc67f113e7853841a1e9e671a9351 248 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 120 139 2.9E-8 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_01630 35bbc67f113e7853841a1e9e671a9351 248 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 157 168 2.9E-8 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_01630 35bbc67f113e7853841a1e9e671a9351 248 SUPERFAMILY SSF52343 97 242 1.7E-22 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_01630 35bbc67f113e7853841a1e9e671a9351 248 Pfam PF00970 Oxidoreductase FAD-binding domain 15 106 3.4E-10 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG62_10615 852444dbb09d7024371b1b425d4fc5e6 106 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 87 104 - T 23-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CDG62_10615 852444dbb09d7024371b1b425d4fc5e6 106 SUPERFAMILY SSF89360 1 95 2.88E-32 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDG62_10615 852444dbb09d7024371b1b425d4fc5e6 106 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 106 1.2E-36 T 23-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CDG62_10615 852444dbb09d7024371b1b425d4fc5e6 106 Gene3D G3DSA:2.60.300.12 1 106 2.3E-37 T 23-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 CDG62_10615 852444dbb09d7024371b1b425d4fc5e6 106 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 102 3.5E-23 T 23-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CDG62_10615 852444dbb09d7024371b1b425d4fc5e6 106 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 2 106 2.4E-51 T 23-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CDG62_08510 76e5013f799904080463a18a02ed31a7 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 149 183 6.5E-7 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_08510 76e5013f799904080463a18a02ed31a7 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 105 5.2E-5 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_08510 76e5013f799904080463a18a02ed31a7 203 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 157 185 - T 23-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CDG62_08510 76e5013f799904080463a18a02ed31a7 203 SUPERFAMILY SSF51161 49 202 6.72E-38 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG62_08510 76e5013f799904080463a18a02ed31a7 203 Gene3D G3DSA:2.160.10.10 38 202 5.5E-44 T 23-10-2018 CDG62_15250 dcb1c53bf2b89ebbd7b3a0f6429516ce 481 Gene3D G3DSA:1.20.1740.10 17 476 1.8E-62 T 23-10-2018 CDG62_15250 dcb1c53bf2b89ebbd7b3a0f6429516ce 481 Pfam PF00324 Amino acid permease 24 458 2.2E-106 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG62_15250 dcb1c53bf2b89ebbd7b3a0f6429516ce 481 ProSitePatterns PS00218 Amino acid permeases signature. 49 79 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG62_15250 dcb1c53bf2b89ebbd7b3a0f6429516ce 481 PIRSF PIRSF006060 1 481 1.4E-74 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 SUPERFAMILY SSF55486 212 456 3.63E-72 T 23-10-2018 CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 Gene3D G3DSA:2.60.40.1840 451 557 3.2E-25 T 23-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 Gene3D G3DSA:1.25.50.10 558 868 1.7E-66 T 23-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 19 866 8.8E-297 T 23-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 Gene3D G3DSA:2.60.40.1730 22 201 1.0E-64 T 23-10-2018 CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 451 556 2.5E-24 T 23-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 560 867 1.3E-67 T 23-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 Gene3D G3DSA:1.10.1740.60 202 286 6.8E-38 T 23-10-2018 CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 Gene3D G3DSA:1.10.390.10 287 450 5.4E-59 T 23-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 Pfam PF01433 Peptidase family M1 domain 215 445 5.3E-55 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 316 1.6E-8 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 320 332 1.6E-8 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 265 275 1.6E-8 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 1.6E-8 T 23-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CDG62_10315 fcc9765367273684b23cb8e59faee4a2 869 SUPERFAMILY SSF63737 12 200 2.88E-37 T 23-10-2018 CDG62_05955 15b478f66b2a646941dbcfd655a5f2a3 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 2.5E-43 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG62_05955 15b478f66b2a646941dbcfd655a5f2a3 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 7.4E-87 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG62_05955 15b478f66b2a646941dbcfd655a5f2a3 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 CDG62_05955 15b478f66b2a646941dbcfd655a5f2a3 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDG62_05955 15b478f66b2a646941dbcfd655a5f2a3 391 SUPERFAMILY SSF53901 270 390 1.18E-38 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_05955 15b478f66b2a646941dbcfd655a5f2a3 391 Gene3D G3DSA:3.40.47.10 5 274 6.1E-141 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_05955 15b478f66b2a646941dbcfd655a5f2a3 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.3E-128 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_05955 15b478f66b2a646941dbcfd655a5f2a3 391 PIRSF PIRSF000429 1 391 4.0E-114 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_05955 15b478f66b2a646941dbcfd655a5f2a3 391 SUPERFAMILY SSF53901 3 267 4.51E-79 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_05955 15b478f66b2a646941dbcfd655a5f2a3 391 Gene3D G3DSA:3.40.47.10 126 388 6.1E-141 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_12520 03b8aaffb56807fdc665a1e720d5e196 431 Gene3D G3DSA:3.30.70.270 10 165 5.6E-39 T 23-10-2018 CDG62_12520 03b8aaffb56807fdc665a1e720d5e196 431 Pfam PF00817 impB/mucB/samB family 11 158 2.9E-32 T 23-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG62_12520 03b8aaffb56807fdc665a1e720d5e196 431 Pfam PF13438 Domain of unknown function (DUF4113) 380 430 4.9E-13 T 23-10-2018 IPR025188 Domain of unknown function DUF4113 CDG62_12520 03b8aaffb56807fdc665a1e720d5e196 431 Gene3D G3DSA:1.10.150.20 178 238 2.9E-6 T 23-10-2018 CDG62_12520 03b8aaffb56807fdc665a1e720d5e196 431 Gene3D G3DSA:2.30.40.20 16 79 5.6E-39 T 23-10-2018 CDG62_12520 03b8aaffb56807fdc665a1e720d5e196 431 SUPERFAMILY SSF56672 7 246 2.22E-62 T 23-10-2018 CDG62_12520 03b8aaffb56807fdc665a1e720d5e196 431 Pfam PF11799 impB/mucB/samB family C-terminal domain 252 361 8.3E-12 T 23-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG62_08675 77b34932ae7120a3b75df922718d8629 481 Pfam PF00772 DnaB-like helicase N terminal domain 31 133 2.4E-27 T 23-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CDG62_08675 77b34932ae7120a3b75df922718d8629 481 Pfam PF03796 DnaB-like helicase C terminal domain 212 468 1.8E-107 T 23-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CDG62_08675 77b34932ae7120a3b75df922718d8629 481 SUPERFAMILY SSF52540 210 461 6.25E-47 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_08675 77b34932ae7120a3b75df922718d8629 481 Gene3D G3DSA:3.40.50.300 189 475 1.5E-100 T 23-10-2018 CDG62_08675 77b34932ae7120a3b75df922718d8629 481 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 31 470 3.0E-163 T 23-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CDG62_08675 77b34932ae7120a3b75df922718d8629 481 SUPERFAMILY SSF48024 29 141 6.15E-29 T 23-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 CDG62_08675 77b34932ae7120a3b75df922718d8629 481 Gene3D G3DSA:1.10.860.10 24 188 1.2E-41 T 23-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CDG62_06335 0d8ada8098e2a5a630818f92013c8189 368 Gene3D G3DSA:3.30.70.1560 134 217 1.7E-48 T 23-10-2018 CDG62_06335 0d8ada8098e2a5a630818f92013c8189 368 SMART SM00363 3 64 1.0E-9 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_06335 0d8ada8098e2a5a630818f92013c8189 368 Pfam PF00849 RNA pseudouridylate synthase 67 199 1.7E-15 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_06335 0d8ada8098e2a5a630818f92013c8189 368 Gene3D G3DSA:3.30.70.580 68 235 1.7E-48 T 23-10-2018 CDG62_06335 0d8ada8098e2a5a630818f92013c8189 368 Gene3D G3DSA:3.10.290.10 1 58 3.3E-19 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDG62_06335 0d8ada8098e2a5a630818f92013c8189 368 Pfam PF01479 S4 domain 4 48 3.4E-11 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_06335 0d8ada8098e2a5a630818f92013c8189 368 SUPERFAMILY SSF55174 5 95 3.24E-17 T 23-10-2018 CDG62_06335 0d8ada8098e2a5a630818f92013c8189 368 SUPERFAMILY SSF55120 66 235 3.45E-41 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_06335 0d8ada8098e2a5a630818f92013c8189 368 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 231 6.3E-52 T 23-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDG62_06335 0d8ada8098e2a5a630818f92013c8189 368 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 23-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDG62_17265 f2f547a00508ba46e471d1d59d0c9ed7 225 Pfam PF07077 Protein of unknown function (DUF1345) 41 214 1.3E-55 T 23-10-2018 IPR009781 Protein of unknown function DUF1345 CDG62_05640 190ff884f8aed6a066f98c372574d268 267 SUPERFAMILY SSF51366 1 246 1.32E-89 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG62_05640 190ff884f8aed6a066f98c372574d268 267 Gene3D G3DSA:3.20.20.70 1 267 1.8E-98 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_05640 190ff884f8aed6a066f98c372574d268 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 23-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_05640 190ff884f8aed6a066f98c372574d268 267 Pfam PF00290 Tryptophan synthase alpha chain 8 257 1.2E-85 T 23-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_05640 190ff884f8aed6a066f98c372574d268 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 34.265 T 23-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_05640 190ff884f8aed6a066f98c372574d268 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 249 2.2E-74 T 23-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_06895 5a2cd3b9cec8f9d7dfc032593bff7f33 318 PIRSF PIRSF007580 18 301 2.2E-48 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG62_06895 5a2cd3b9cec8f9d7dfc032593bff7f33 318 Pfam PF10118 Predicted metal-dependent hydrolase 31 284 2.1E-58 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG62_03450 3d495858b7d657a6526aad8d7c2ab931 608 Gene3D G3DSA:3.40.30.10 488 608 5.2E-22 T 23-10-2018 CDG62_03450 3d495858b7d657a6526aad8d7c2ab931 608 SUPERFAMILY SSF52833 496 606 8.42E-18 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_03450 3d495858b7d657a6526aad8d7c2ab931 608 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 219 398 6.6E-17 T 23-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CDG62_03450 3d495858b7d657a6526aad8d7c2ab931 608 Pfam PF11412 Disulphide bond corrector protein DsbC 40 147 1.8E-25 T 23-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CDG62_03450 3d495858b7d657a6526aad8d7c2ab931 608 ProSitePatterns PS00194 Thioredoxin family active site. 517 535 - T 23-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDG62_03450 3d495858b7d657a6526aad8d7c2ab931 608 Pfam PF00085 Thioredoxin 498 606 1.4E-7 T 23-10-2018 IPR013766 Thioredoxin domain GO:0045454 CDG62_03450 3d495858b7d657a6526aad8d7c2ab931 608 Gene3D G3DSA:2.60.40.1250 31 159 9.7E-31 T 23-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CDG62_03450 3d495858b7d657a6526aad8d7c2ab931 608 SUPERFAMILY SSF74863 39 147 8.76E-26 T 23-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CDG62_11215 ba71773c8b21b49c087fea11c5ac005c 261 Gene3D G3DSA:3.40.50.720 1 260 5.9E-67 T 23-10-2018 CDG62_11215 ba71773c8b21b49c087fea11c5ac005c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 4.8E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11215 ba71773c8b21b49c087fea11c5ac005c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.8E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11215 ba71773c8b21b49c087fea11c5ac005c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.8E-12 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11215 ba71773c8b21b49c087fea11c5ac005c 261 SUPERFAMILY SSF51735 9 258 1.57E-68 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_11215 ba71773c8b21b49c087fea11c5ac005c 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG62_11215 ba71773c8b21b49c087fea11c5ac005c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.7E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11215 ba71773c8b21b49c087fea11c5ac005c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.7E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11215 ba71773c8b21b49c087fea11c5ac005c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.7E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11215 ba71773c8b21b49c087fea11c5ac005c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.7E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11215 ba71773c8b21b49c087fea11c5ac005c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.7E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11215 ba71773c8b21b49c087fea11c5ac005c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.7E-35 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11215 ba71773c8b21b49c087fea11c5ac005c 261 Pfam PF00106 short chain dehydrogenase 10 192 2.5E-51 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_19140 2c43a32b564f4ebd343edd05d6676131 427 Gene3D G3DSA:1.10.101.10 350 421 1.1E-9 T 23-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 CDG62_19140 2c43a32b564f4ebd343edd05d6676131 427 SUPERFAMILY SSF47090 348 419 2.2E-15 T 23-10-2018 IPR036365 PGBD-like superfamily CDG62_19140 2c43a32b564f4ebd343edd05d6676131 427 Gene3D G3DSA:1.10.8.350 62 221 3.1E-82 T 23-10-2018 CDG62_19140 2c43a32b564f4ebd343edd05d6676131 427 SUPERFAMILY SSF53955 43 348 1.24E-92 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG62_19140 2c43a32b564f4ebd343edd05d6676131 427 Gene3D G3DSA:1.10.530.10 88 340 3.1E-82 T 23-10-2018 CDG62_19140 2c43a32b564f4ebd343edd05d6676131 427 Pfam PF01471 Putative peptidoglycan binding domain 362 416 3.0E-10 T 23-10-2018 IPR002477 Peptidoglycan binding-like CDG62_19140 2c43a32b564f4ebd343edd05d6676131 427 Pfam PF13406 Transglycosylase SLT domain 45 341 7.6E-102 T 23-10-2018 IPR031304 Transglycosylase SLT domain 2 CDG62_19140 2c43a32b564f4ebd343edd05d6676131 427 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 45 345 2.6E-107 T 23-10-2018 IPR011970 Lytic murein transglycosylase CDG62_15950 52b672951d7091edabfebbb629837c1e 711 Gene3D G3DSA:3.30.70.240 613 684 6.0E-87 T 23-10-2018 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 SUPERFAMILY SSF54980 612 700 8.63E-30 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG62_15950 52b672951d7091edabfebbb629837c1e 711 SUPERFAMILY SSF54211 490 608 1.16E-41 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_15950 52b672951d7091edabfebbb629837c1e 711 Hamap MF_00054_B Elongation factor G [fusA]. 6 701 111.613 T 23-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.5E-29 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 Pfam PF00679 Elongation factor G C-terminus 609 695 2.7E-31 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like CDG62_15950 52b672951d7091edabfebbb629837c1e 711 SUPERFAMILY SSF52540 6 288 1.13E-104 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_15950 52b672951d7091edabfebbb629837c1e 711 Gene3D G3DSA:3.30.230.10 491 696 6.0E-87 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG62_15950 52b672951d7091edabfebbb629837c1e 711 SUPERFAMILY SSF50447 271 411 1.26E-35 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG62_15950 52b672951d7091edabfebbb629837c1e 711 SMART SM00838 609 697 2.8E-56 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like CDG62_15950 52b672951d7091edabfebbb629837c1e 711 Gene3D G3DSA:3.40.50.300 1 299 5.8E-111 T 23-10-2018 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 Gene3D G3DSA:3.30.70.870 413 487 1.1E-32 T 23-10-2018 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 SMART SM00889 487 607 1.0E-63 T 23-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site CDG62_15950 52b672951d7091edabfebbb629837c1e 711 Pfam PF03764 Elongation factor G, domain IV 486 606 1.1E-41 T 23-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 Pfam PF03144 Elongation factor Tu domain 2 331 398 1.2E-17 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 701 0.0 T 23-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 Gene3D G3DSA:2.40.30.10 300 412 2.7E-44 T 23-10-2018 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 PRINTS PR00315 GTP-binding elongation factor signature 85 95 5.0E-15 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.0E-15 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 PRINTS PR00315 GTP-binding elongation factor signature 137 146 5.0E-15 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.0E-15 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 PRINTS PR00315 GTP-binding elongation factor signature 101 112 5.0E-15 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 4.1E-64 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 Pfam PF14492 Elongation Factor G, domain II 411 485 1.6E-34 T 23-10-2018 CDG62_15950 52b672951d7091edabfebbb629837c1e 711 SUPERFAMILY SSF54980 409 486 5.04E-25 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG62_03080 8ce4b9ce8c1e8277f8f23da9b18550c8 561 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 8 556 43.278 T 23-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG62_03080 8ce4b9ce8c1e8277f8f23da9b18550c8 561 Gene3D G3DSA:3.50.30.80 378 527 2.0E-52 T 23-10-2018 CDG62_03080 8ce4b9ce8c1e8277f8f23da9b18550c8 561 SUPERFAMILY SSF52016 379 557 2.51E-57 T 23-10-2018 CDG62_03080 8ce4b9ce8c1e8277f8f23da9b18550c8 561 SUPERFAMILY SSF143975 5 376 2.35E-128 T 23-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG62_03080 8ce4b9ce8c1e8277f8f23da9b18550c8 561 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 126 136 - T 23-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG62_03080 8ce4b9ce8c1e8277f8f23da9b18550c8 561 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 464 475 - T 23-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG62_03080 8ce4b9ce8c1e8277f8f23da9b18550c8 561 Pfam PF00920 Dehydratase family 38 553 1.8E-205 T 23-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG62_03080 8ce4b9ce8c1e8277f8f23da9b18550c8 561 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 21 556 7.0E-217 T 23-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CDG62_15590 21484664064d69d01b4ca85ff926f8b2 259 Gene3D G3DSA:1.20.120.1630 53 255 3.8E-16 T 23-10-2018 CDG62_15590 21484664064d69d01b4ca85ff926f8b2 259 Pfam PF06966 Protein of unknown function (DUF1295) 17 249 3.5E-53 T 23-10-2018 IPR010721 Protein of unknown function DUF1295 CDG62_18505 600e0a234e5ce2657680c07f5bd15012 156 SUPERFAMILY SSF81573 63 121 2.88E-12 T 23-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CDG62_18505 600e0a234e5ce2657680c07f5bd15012 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 3.2E-35 T 23-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CDG62_18505 600e0a234e5ce2657680c07f5bd15012 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 8.1E-47 T 23-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 CDG62_18505 600e0a234e5ce2657680c07f5bd15012 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.228 T 23-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CDG62_18505 600e0a234e5ce2657680c07f5bd15012 156 Gene3D G3DSA:1.20.5.620 62 122 3.2E-14 T 23-10-2018 CDG62_14120 52372acf3bbbab12657340d7a02b2f1a 392 Gene3D G3DSA:3.50.50.60 5 284 2.6E-78 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14120 52372acf3bbbab12657340d7a02b2f1a 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.1E-16 T 23-10-2018 CDG62_14120 52372acf3bbbab12657340d7a02b2f1a 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 175 1.1E-16 T 23-10-2018 CDG62_14120 52372acf3bbbab12657340d7a02b2f1a 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 1.1E-16 T 23-10-2018 CDG62_14120 52372acf3bbbab12657340d7a02b2f1a 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 237 251 1.1E-16 T 23-10-2018 CDG62_14120 52372acf3bbbab12657340d7a02b2f1a 392 SUPERFAMILY SSF51905 2 309 1.53E-37 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14120 52372acf3bbbab12657340d7a02b2f1a 392 Gene3D G3DSA:3.50.50.60 111 248 2.6E-78 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14120 52372acf3bbbab12657340d7a02b2f1a 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.6E-23 T 23-10-2018 CDG62_14120 52372acf3bbbab12657340d7a02b2f1a 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 2.6E-23 T 23-10-2018 CDG62_14120 52372acf3bbbab12657340d7a02b2f1a 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 2.6E-23 T 23-10-2018 CDG62_14120 52372acf3bbbab12657340d7a02b2f1a 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 2.6E-23 T 23-10-2018 CDG62_14120 52372acf3bbbab12657340d7a02b2f1a 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.6E-23 T 23-10-2018 CDG62_14120 52372acf3bbbab12657340d7a02b2f1a 392 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 283 8.8E-53 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_14120 52372acf3bbbab12657340d7a02b2f1a 392 Gene3D G3DSA:3.30.390.120 320 384 1.7E-14 T 23-10-2018 CDG62_05215 5f313ebf41dd19236c6bc083a828c27d 663 SMART SM00382 35 229 6.0E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_05215 5f313ebf41dd19236c6bc083a828c27d 663 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_05215 5f313ebf41dd19236c6bc083a828c27d 663 Gene3D G3DSA:3.40.50.300 4 280 1.0E-68 T 23-10-2018 CDG62_05215 5f313ebf41dd19236c6bc083a828c27d 663 Pfam PF00005 ABC transporter 26 174 1.3E-30 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_05215 5f313ebf41dd19236c6bc083a828c27d 663 Pfam PF02687 FtsX-like permease family 567 656 5.4E-13 T 23-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDG62_05215 5f313ebf41dd19236c6bc083a828c27d 663 SUPERFAMILY SSF52540 6 228 6.12E-67 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_05215 5f313ebf41dd19236c6bc083a828c27d 663 Pfam PF12704 MacB-like periplasmic core domain 285 504 2.5E-39 T 23-10-2018 IPR025857 MacB-like periplasmic core domain CDG62_08170 e62f2d584fa856d2d1c45803880c5e31 480 Gene3D G3DSA:3.30.750.24 388 480 3.2E-22 T 23-10-2018 IPR036513 STAS domain superfamily CDG62_08170 e62f2d584fa856d2d1c45803880c5e31 480 Pfam PF00916 Sulfate permease family 155 345 3.4E-30 T 23-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CDG62_08170 e62f2d584fa856d2d1c45803880c5e31 480 Pfam PF00916 Sulfate permease family 14 143 1.1E-25 T 23-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CDG62_08170 e62f2d584fa856d2d1c45803880c5e31 480 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 23-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 CDG62_08170 e62f2d584fa856d2d1c45803880c5e31 480 SUPERFAMILY SSF52091 392 477 3.34E-9 T 23-10-2018 IPR036513 STAS domain superfamily CDG62_00705 653807c4b461e8250ec3629950768982 680 SUPERFAMILY SSF81901 20 175 2.01E-30 T 23-10-2018 CDG62_00705 653807c4b461e8250ec3629950768982 680 SUPERFAMILY SSF81901 202 408 5.76E-38 T 23-10-2018 CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 98 133 0.17 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 287 305 0.45 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 560 587 14.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 481 514 1.2E-5 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 62 97 1.9E-7 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 447 479 0.011 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 238 273 1.0E-7 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 307 342 0.004 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 136 167 100.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 204 236 0.0091 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 45 60 95.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 427 443 1.8 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 517 543 0.086 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 376 409 1.3E-5 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Pfam PF08238 Sel1 repeat 595 623 2.8 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 343 374 9.4 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 516 551 0.43 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 412 443 190.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 98 133 3.9E-4 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 306 342 8.9E-4 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 594 629 0.32 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 30 61 7.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 62 97 1.7E-10 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 274 305 0.93 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 444 479 0.0016 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 480 515 7.1E-9 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 201 236 7.1 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 134 167 1.8 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 237 273 8.4E-7 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 375 411 0.0018 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 SMART SM00671 558 593 210.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_00705 653807c4b461e8250ec3629950768982 680 Gene3D G3DSA:1.25.40.10 426 678 2.0E-46 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_00705 653807c4b461e8250ec3629950768982 680 SUPERFAMILY SSF81901 421 639 2.27E-42 T 23-10-2018 CDG62_14275 5b2734d6ca2a64b146e2cb6e28f63137 265 Gene3D G3DSA:3.90.226.10 2 207 3.8E-53 T 23-10-2018 CDG62_14275 5b2734d6ca2a64b146e2cb6e28f63137 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 265 1.6E-38 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDG62_14275 5b2734d6ca2a64b146e2cb6e28f63137 265 SUPERFAMILY SSF52096 7 264 1.29E-59 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_14275 5b2734d6ca2a64b146e2cb6e28f63137 265 Gene3D G3DSA:1.10.12.10 208 265 1.7E-18 T 23-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDG62_15815 b68aa18ed5046b5665ea77bbbf36f516 132 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 117 29.528 T 23-10-2018 IPR026592 Outer membrane protein assembly factor BamE CDG62_15815 b68aa18ed5046b5665ea77bbbf36f516 132 Gene3D G3DSA:3.30.1450.10 29 116 2.2E-24 T 23-10-2018 IPR037873 BamE-like CDG62_15815 b68aa18ed5046b5665ea77bbbf36f516 132 Pfam PF04355 SmpA / OmlA family 30 106 8.3E-25 T 23-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CDG62_01765 497bdd127548d28480bd333bf063bf0e 248 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 5.2E-21 T 23-10-2018 IPR025161 Putative transposase IS4/IS5 family CDG62_01765 497bdd127548d28480bd333bf063bf0e 248 Pfam PF01609 Transposase DDE domain 87 243 3.1E-21 T 23-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CDG62_05695 c031a5a631b2b8b72313bc8f790a3f54 355 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 355 67.025 T 23-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDG62_05695 c031a5a631b2b8b72313bc8f790a3f54 355 Gene3D G3DSA:3.40.50.10800 125 348 5.5E-96 T 23-10-2018 CDG62_05695 c031a5a631b2b8b72313bc8f790a3f54 355 Pfam PF02445 Quinolinate synthetase A protein 45 348 6.9E-103 T 23-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDG62_05695 c031a5a631b2b8b72313bc8f790a3f54 355 SUPERFAMILY SSF142754 41 349 6.15E-108 T 23-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDG62_05695 c031a5a631b2b8b72313bc8f790a3f54 355 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 43 350 2.1E-112 T 23-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDG62_05695 c031a5a631b2b8b72313bc8f790a3f54 355 Gene3D G3DSA:3.40.50.10800 45 330 5.5E-96 T 23-10-2018 CDG62_05695 c031a5a631b2b8b72313bc8f790a3f54 355 Gene3D G3DSA:3.40.50.10800 210 305 5.5E-96 T 23-10-2018 CDG62_04395 afaafc75389a1b7b3846be6b5838d3ba 469 SUPERFAMILY SSF56176 4 222 1.96E-67 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG62_04395 afaafc75389a1b7b3846be6b5838d3ba 469 Pfam PF02913 FAD linked oxidases, C-terminal domain 222 466 2.1E-60 T 23-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CDG62_04395 afaafc75389a1b7b3846be6b5838d3ba 469 Gene3D G3DSA:3.30.465.10 100 220 2.0E-39 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG62_04395 afaafc75389a1b7b3846be6b5838d3ba 469 SUPERFAMILY SSF55103 226 468 2.62E-61 T 23-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CDG62_04395 afaafc75389a1b7b3846be6b5838d3ba 469 Gene3D G3DSA:1.10.45.10 427 466 1.6E-14 T 23-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDG62_04395 afaafc75389a1b7b3846be6b5838d3ba 469 Pfam PF01565 FAD binding domain 46 184 7.8E-40 T 23-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CDG62_04395 afaafc75389a1b7b3846be6b5838d3ba 469 Gene3D G3DSA:3.30.70.2190 222 338 1.5E-26 T 23-10-2018 CDG62_04395 afaafc75389a1b7b3846be6b5838d3ba 469 Gene3D G3DSA:3.30.43.10 1 98 4.4E-27 T 23-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 CDG62_04395 afaafc75389a1b7b3846be6b5838d3ba 469 Gene3D G3DSA:3.30.70.2740 341 426 7.3E-27 T 23-10-2018 CDG62_18540 c2d69894face0bee581ac5aa8d708d5e 266 Gene3D G3DSA:1.10.3470.10 33 265 6.6E-6 T 23-10-2018 IPR037294 ABC transporter, BtuC-like CDG62_18540 c2d69894face0bee581ac5aa8d708d5e 266 SUPERFAMILY SSF81345 4 256 3.92E-30 T 23-10-2018 IPR037294 ABC transporter, BtuC-like CDG62_18540 c2d69894face0bee581ac5aa8d708d5e 266 Pfam PF00950 ABC 3 transport family 6 258 2.0E-52 T 23-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CDG62_07380 4fb70420c35b6af9f7767390bc4beaa4 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 240 1.0E-62 T 23-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CDG62_07380 4fb70420c35b6af9f7767390bc4beaa4 252 Gene3D G3DSA:3.40.1390.30 98 223 2.5E-80 T 23-10-2018 CDG62_07380 4fb70420c35b6af9f7767390bc4beaa4 252 Gene3D G3DSA:3.40.1390.30 7 239 2.5E-80 T 23-10-2018 CDG62_07380 4fb70420c35b6af9f7767390bc4beaa4 252 SUPERFAMILY SSF102705 1 251 4.71E-79 T 23-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CDG62_07380 4fb70420c35b6af9f7767390bc4beaa4 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 3 250 3.3E-64 T 23-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CDG62_04770 b77eff6478ab2da9e119a82ab8cef25e 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.477 T 23-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDG62_04770 b77eff6478ab2da9e119a82ab8cef25e 177 Gene3D G3DSA:3.90.930.12 1 82 2.4E-27 T 23-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04770 b77eff6478ab2da9e119a82ab8cef25e 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 23-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04770 b77eff6478ab2da9e119a82ab8cef25e 177 Gene3D G3DSA:3.90.930.12 83 177 1.1E-37 T 23-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04770 b77eff6478ab2da9e119a82ab8cef25e 177 SUPERFAMILY SSF56053 83 177 1.22E-34 T 23-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04770 b77eff6478ab2da9e119a82ab8cef25e 177 SUPERFAMILY SSF56053 1 82 5.37E-23 T 23-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04770 b77eff6478ab2da9e119a82ab8cef25e 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 6.0E-33 T 23-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDG62_04770 b77eff6478ab2da9e119a82ab8cef25e 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 6.0E-33 T 23-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDG62_04770 b77eff6478ab2da9e119a82ab8cef25e 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 6.0E-33 T 23-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDG62_04770 b77eff6478ab2da9e119a82ab8cef25e 177 Pfam PF00347 Ribosomal protein L6 11 82 1.4E-14 T 23-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04770 b77eff6478ab2da9e119a82ab8cef25e 177 Pfam PF00347 Ribosomal protein L6 90 164 4.1E-18 T 23-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04770 b77eff6478ab2da9e119a82ab8cef25e 177 PIRSF PIRSF002162 1 177 4.3E-43 T 23-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04770 b77eff6478ab2da9e119a82ab8cef25e 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.5E-71 T 23-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CDG62_15445 bdafefa9d458fa6780358e1d41c75581 516 Gene3D G3DSA:3.90.1210.30 6 84 8.5E-23 T 23-10-2018 CDG62_15445 bdafefa9d458fa6780358e1d41c75581 516 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 7 516 1.2E-263 T 23-10-2018 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 CDG62_15445 bdafefa9d458fa6780358e1d41c75581 516 SMART SM00858 14 85 9.3E-8 T 23-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CDG62_15445 bdafefa9d458fa6780358e1d41c75581 516 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 112 514 4.9E-140 T 23-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CDG62_15445 bdafefa9d458fa6780358e1d41c75581 516 Pfam PF08666 SAF domain 14 82 3.1E-10 T 23-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CDG62_16500 10b097ae00e522960665f004c0ec965f 937 SMART SM00387 401 522 2.4E-34 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_16500 10b097ae00e522960665f004c0ec965f 937 Gene3D G3DSA:3.40.50.2300 652 795 8.6E-39 T 23-10-2018 CDG62_16500 10b097ae00e522960665f004c0ec965f 937 Gene3D G3DSA:1.10.287.130 250 352 2.3E-26 T 23-10-2018 CDG62_16500 10b097ae00e522960665f004c0ec965f 937 Gene3D G3DSA:1.20.120.160 811 935 6.4E-22 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG62_16500 10b097ae00e522960665f004c0ec965f 937 SUPERFAMILY SSF55874 343 517 2.23E-40 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_16500 10b097ae00e522960665f004c0ec965f 937 SMART SM00448 665 788 1.2E-32 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_16500 10b097ae00e522960665f004c0ec965f 937 Gene3D G3DSA:3.30.565.10 353 526 5.3E-48 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_16500 10b097ae00e522960665f004c0ec965f 937 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 518 1.7E-25 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_16500 10b097ae00e522960665f004c0ec965f 937 SUPERFAMILY SSF47384 274 355 5.49E-22 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG62_16500 10b097ae00e522960665f004c0ec965f 937 SUPERFAMILY SSF47226 771 893 1.83E-16 T 23-10-2018 IPR036641 HPT domain superfamily GO:0000160 CDG62_16500 10b097ae00e522960665f004c0ec965f 937 SMART SM00073 824 921 5.3E-4 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG62_16500 10b097ae00e522960665f004c0ec965f 937 SUPERFAMILY SSF52172 663 791 2.7E-33 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_16500 10b097ae00e522960665f004c0ec965f 937 SMART SM00388 288 354 5.0E-23 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_16500 10b097ae00e522960665f004c0ec965f 937 Pfam PF00072 Response regulator receiver domain 667 788 2.8E-23 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_16500 10b097ae00e522960665f004c0ec965f 937 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 2.6E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_16500 10b097ae00e522960665f004c0ec965f 937 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 2.6E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_16500 10b097ae00e522960665f004c0ec965f 937 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 495 2.6E-9 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_16500 10b097ae00e522960665f004c0ec965f 937 Pfam PF01627 Hpt domain 834 925 1.3E-8 T 23-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 CDG62_16500 10b097ae00e522960665f004c0ec965f 937 Pfam PF00512 His Kinase A (phospho-acceptor) domain 288 354 7.0E-21 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_05590 29c60c555ad3ee29fad9d872d222309b 192 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 185 2.4E-50 T 23-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDG62_05590 29c60c555ad3ee29fad9d872d222309b 192 Pfam PF01923 Cobalamin adenosyltransferase 8 172 5.2E-53 T 23-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDG62_05590 29c60c555ad3ee29fad9d872d222309b 192 SUPERFAMILY SSF89028 7 185 1.96E-55 T 23-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDG62_05590 29c60c555ad3ee29fad9d872d222309b 192 Gene3D G3DSA:1.20.1200.10 17 189 5.2E-53 T 23-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDG62_05590 29c60c555ad3ee29fad9d872d222309b 192 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 26 186 2.0E-74 T 23-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 CDG62_09380 a262c1db563843fa91776ded8201b1e6 153 Gene3D G3DSA:2.40.128.520 26 153 5.7E-7 T 23-10-2018 CDG62_09380 a262c1db563843fa91776ded8201b1e6 153 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 29 150 1.3E-8 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG62_04875 8b3b7b5fcf4b1f53822ee836d458c968 72 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 48 3.4E-18 T 23-10-2018 IPR012658 Conserved hypothetical protein CHP02443 CDG62_04875 8b3b7b5fcf4b1f53822ee836d458c968 72 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 49 4.7E-19 T 23-10-2018 IPR012658 Conserved hypothetical protein CHP02443 CDG62_03365 d64a0fb766fa27ffc7c8b487d64ddbb0 525 Pfam PF04262 Glutamate-cysteine ligase 17 388 4.2E-146 T 23-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CDG62_03365 d64a0fb766fa27ffc7c8b487d64ddbb0 525 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 9 523 1.7E-162 T 23-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CDG62_03365 d64a0fb766fa27ffc7c8b487d64ddbb0 525 SUPERFAMILY SSF55931 10 522 5.82E-177 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CDG62_03365 d64a0fb766fa27ffc7c8b487d64ddbb0 525 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 525 182.95 T 23-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CDG62_03365 d64a0fb766fa27ffc7c8b487d64ddbb0 525 Gene3D G3DSA:3.30.590.20 19 525 5.7E-176 T 23-10-2018 CDG62_15960 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.5E-68 T 23-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_15960 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.231 T 23-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_15960 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 Gene3D G3DSA:2.40.50.140 1 124 2.5E-62 T 23-10-2018 CDG62_15960 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 4.7E-42 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_15960 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_15960 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.4E-59 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_15960 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.4E-59 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_15960 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.4E-59 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_15960 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.4E-59 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_15960 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.4E-59 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_15960 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.4E-59 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_15960 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PIRSF PIRSF002133 1 124 5.1E-53 T 23-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_15960 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 SUPERFAMILY SSF50249 3 123 6.85E-51 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_06370 70f33f9df779d2e5266e4f737da99abb 60 Pfam PF01783 Ribosomal L32p protein family 2 55 2.2E-19 T 23-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_06370 70f33f9df779d2e5266e4f737da99abb 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.359 T 23-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_06370 70f33f9df779d2e5266e4f737da99abb 60 SUPERFAMILY SSF57829 2 54 3.42E-17 T 23-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CDG62_06370 70f33f9df779d2e5266e4f737da99abb 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 53 2.0E-19 T 23-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_12650 7358f4083b040c13caa3dd35723da3b9 320 SUPERFAMILY SSF52096 52 255 3.87E-25 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_12650 7358f4083b040c13caa3dd35723da3b9 320 Gene3D G3DSA:3.40.1750.20 159 223 1.8E-39 T 23-10-2018 CDG62_12650 7358f4083b040c13caa3dd35723da3b9 320 Gene3D G3DSA:3.90.226.10 90 256 1.8E-39 T 23-10-2018 CDG62_12650 7358f4083b040c13caa3dd35723da3b9 320 Pfam PF08496 Peptidase family S49 N-terminal 10 115 2.3E-31 T 23-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 CDG62_12650 7358f4083b040c13caa3dd35723da3b9 320 Pfam PF01343 Peptidase family S49 119 256 7.7E-41 T 23-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CDG62_14900 4eecef9920e7cd83596b2b0a901af566 188 Hamap MF_00528 Septum formation protein Maf [maf]. 3 188 31.173 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG62_14900 4eecef9920e7cd83596b2b0a901af566 188 SUPERFAMILY SSF52972 2 182 9.81E-62 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDG62_14900 4eecef9920e7cd83596b2b0a901af566 188 PIRSF PIRSF006305 1 188 7.9E-56 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG62_14900 4eecef9920e7cd83596b2b0a901af566 188 Gene3D G3DSA:3.90.950.10 1 186 1.3E-70 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDG62_14900 4eecef9920e7cd83596b2b0a901af566 188 Pfam PF02545 Maf-like protein 3 183 2.2E-59 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG62_14900 4eecef9920e7cd83596b2b0a901af566 188 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 182 3.9E-54 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG62_16445 11ec9b7d25c9db57f2235b46d37046de 280 Gene3D G3DSA:3.40.50.620 1 177 1.1E-74 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_16445 11ec9b7d25c9db57f2235b46d37046de 280 Hamap MF_00158 Pantothenate synthetase [panC]. 2 277 39.936 T 23-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CDG62_16445 11ec9b7d25c9db57f2235b46d37046de 280 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 80 2.3E-10 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDG62_16445 11ec9b7d25c9db57f2235b46d37046de 280 SUPERFAMILY SSF52374 1 277 1.02E-103 T 23-10-2018 CDG62_16445 11ec9b7d25c9db57f2235b46d37046de 280 Gene3D G3DSA:3.30.1300.10 178 280 1.1E-28 T 23-10-2018 CDG62_16445 11ec9b7d25c9db57f2235b46d37046de 280 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 277 1.5E-97 T 23-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CDG62_16445 11ec9b7d25c9db57f2235b46d37046de 280 Pfam PF02569 Pantoate-beta-alanine ligase 5 275 5.5E-103 T 23-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CDG62_06305 7d43e4c4ddce2efcda2962f9c0062ae5 594 PIRSF PIRSF002741 7 591 4.6E-64 T 23-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CDG62_06305 7d43e4c4ddce2efcda2962f9c0062ae5 594 Gene3D G3DSA:3.90.76.10 44 217 4.8E-32 T 23-10-2018 CDG62_06305 7d43e4c4ddce2efcda2962f9c0062ae5 594 SUPERFAMILY SSF53850 29 590 1.81E-89 T 23-10-2018 CDG62_06305 7d43e4c4ddce2efcda2962f9c0062ae5 594 Gene3D G3DSA:3.40.190.10 218 336 6.0E-22 T 23-10-2018 CDG62_06305 7d43e4c4ddce2efcda2962f9c0062ae5 594 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 511 5.4E-73 T 23-10-2018 IPR000914 Solute-binding protein family 5 domain CDG62_06305 7d43e4c4ddce2efcda2962f9c0062ae5 594 Gene3D G3DSA:3.10.105.10 337 559 7.9E-34 T 23-10-2018 CDG62_18410 1b8b7ab9837f6eae3dd00ee43a19c371 681 Gene3D G3DSA:2.170.130.10 60 158 5.1E-8 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_18410 1b8b7ab9837f6eae3dd00ee43a19c371 681 Gene3D G3DSA:2.40.170.20 162 681 6.5E-60 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_18410 1b8b7ab9837f6eae3dd00ee43a19c371 681 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 55 681 1.8E-217 T 23-10-2018 IPR010100 TonB-dependent copper receptor CDG62_18410 1b8b7ab9837f6eae3dd00ee43a19c371 681 SUPERFAMILY SSF56935 38 681 2.63E-74 T 23-10-2018 CDG62_18410 1b8b7ab9837f6eae3dd00ee43a19c371 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 148 3.2E-9 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_18410 1b8b7ab9837f6eae3dd00ee43a19c371 681 Pfam PF00593 TonB dependent receptor 209 680 5.2E-36 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_10610 75e4aa8167e14bf7667e64f571922f4c 171 SMART SM00271 1 61 1.1E-9 T 23-10-2018 IPR001623 DnaJ domain CDG62_10610 75e4aa8167e14bf7667e64f571922f4c 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 82 153 1.4E-14 T 23-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDG62_10610 75e4aa8167e14bf7667e64f571922f4c 171 Gene3D G3DSA:1.10.287.110 1 74 2.5E-17 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG62_10610 75e4aa8167e14bf7667e64f571922f4c 171 SUPERFAMILY SSF46565 1 68 3.79E-14 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG62_10610 75e4aa8167e14bf7667e64f571922f4c 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 160 16.792 T 23-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDG62_10610 75e4aa8167e14bf7667e64f571922f4c 171 Gene3D G3DSA:1.20.1280.20 75 159 7.7E-18 T 23-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDG62_10610 75e4aa8167e14bf7667e64f571922f4c 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 15 158 1.0E-26 T 23-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDG62_10610 75e4aa8167e14bf7667e64f571922f4c 171 SUPERFAMILY SSF47144 75 161 3.4E-18 T 23-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CDG62_10610 75e4aa8167e14bf7667e64f571922f4c 171 Pfam PF00226 DnaJ domain 6 65 8.3E-9 T 23-10-2018 IPR001623 DnaJ domain CDG62_11740 09ada78c163ff29cf178dd8a658bdc0c 734 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 728 0.0 T 23-10-2018 IPR019938 YcaO domain protein CDG62_11740 09ada78c163ff29cf178dd8a658bdc0c 734 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 550 1.3E-95 T 23-10-2018 IPR003776 YcaO-like domain CDG62_11740 09ada78c163ff29cf178dd8a658bdc0c 734 SUPERFAMILY SSF82784 1 126 3.01E-19 T 23-10-2018 IPR036102 OsmC/Ohr superfamily CDG62_11740 09ada78c163ff29cf178dd8a658bdc0c 734 Pfam PF02566 OsmC-like protein 32 126 2.3E-9 T 23-10-2018 IPR003718 OsmC/Ohr family CDG62_11740 09ada78c163ff29cf178dd8a658bdc0c 734 Gene3D G3DSA:3.30.300.20 2 128 7.1E-15 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG62_11740 09ada78c163ff29cf178dd8a658bdc0c 734 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 540 2.0E-71 T 23-10-2018 IPR003776 YcaO-like domain CDG62_03635 d24917449c48922992d7c7b2c0a99400 359 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 329 4.1E-75 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDG62_03635 d24917449c48922992d7c7b2c0a99400 359 Gene3D G3DSA:3.20.20.70 1 358 3.1E-123 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_03635 d24917449c48922992d7c7b2c0a99400 359 SUPERFAMILY SSF51395 1 351 1.73E-109 T 23-10-2018 CDG62_01280 c3630d563f856ef8f33abe9523144cd9 493 Gene3D G3DSA:1.20.1600.10 70 479 1.3E-131 T 23-10-2018 CDG62_01280 c3630d563f856ef8f33abe9523144cd9 493 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 21 479 3.2E-121 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CDG62_01280 c3630d563f856ef8f33abe9523144cd9 493 Pfam PF02321 Outer membrane efflux protein 79 264 1.2E-21 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_01280 c3630d563f856ef8f33abe9523144cd9 493 Pfam PF02321 Outer membrane efflux protein 297 477 1.2E-28 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_01280 c3630d563f856ef8f33abe9523144cd9 493 SUPERFAMILY SSF56954 9 482 2.09E-108 T 23-10-2018 CDG62_01280 c3630d563f856ef8f33abe9523144cd9 493 Gene3D G3DSA:2.20.200.10 116 368 1.3E-131 T 23-10-2018 CDG62_05605 e63f9561f1ada268b62662a0782a7d8b 409 Gene3D G3DSA:3.40.50.1100 21 217 4.7E-184 T 23-10-2018 CDG62_05605 e63f9561f1ada268b62662a0782a7d8b 409 PIRSF PIRSF001413 3 408 1.2E-164 T 23-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_05605 e63f9561f1ada268b62662a0782a7d8b 409 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 92 106 - T 23-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_05605 e63f9561f1ada268b62662a0782a7d8b 409 SUPERFAMILY SSF53686 14 399 1.31E-149 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG62_05605 e63f9561f1ada268b62662a0782a7d8b 409 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 13 402 52.154 T 23-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_05605 e63f9561f1ada268b62662a0782a7d8b 409 Gene3D G3DSA:3.40.50.1100 65 395 4.7E-184 T 23-10-2018 CDG62_05605 e63f9561f1ada268b62662a0782a7d8b 409 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 64 389 7.9E-47 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG62_05605 e63f9561f1ada268b62662a0782a7d8b 409 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 18 400 2.7E-189 T 23-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_18870 93c765c658e71f61be24b8b8396f8dc6 624 Gene3D G3DSA:3.40.50.720 145 267 3.0E-27 T 23-10-2018 CDG62_18870 93c765c658e71f61be24b8b8396f8dc6 624 Pfam PF02719 Polysaccharide biosynthesis protein 286 573 3.0E-123 T 23-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CDG62_18870 93c765c658e71f61be24b8b8396f8dc6 624 SUPERFAMILY SSF53335 117 338 2.49E-14 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_18870 93c765c658e71f61be24b8b8396f8dc6 624 SUPERFAMILY SSF51735 284 553 2.23E-52 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_18870 93c765c658e71f61be24b8b8396f8dc6 624 Gene3D G3DSA:3.40.50.720 281 606 7.2E-114 T 23-10-2018 CDG62_18870 93c765c658e71f61be24b8b8396f8dc6 624 Pfam PF13727 CoA-binding domain 82 232 6.5E-7 T 23-10-2018 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 SMART SM00929 88 128 1.8E-17 T 23-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 SUPERFAMILY SSF50692 797 876 1.9E-8 T 23-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 Gene3D G3DSA:3.40.50.740 507 678 1.7E-11 T 23-10-2018 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 9.9E-11 T 23-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 643 3.6E-197 T 23-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 SUPERFAMILY SSF54292 1 77 3.28E-19 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 SUPERFAMILY SSF53706 219 677 3.63E-77 T 23-10-2018 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 23-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 SMART SM00926 221 275 3.2E-11 T 23-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 3.4E-11 T 23-10-2018 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 Gene3D G3DSA:2.40.40.20 797 887 4.4E-5 T 23-10-2018 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 Pfam PF00384 Molybdopterin oxidoreductase 572 626 2.0E-6 T 23-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 126 6.6E-14 T 23-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 Gene3D G3DSA:2.20.25.90 221 275 2.9E-13 T 23-10-2018 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 SUPERFAMILY SSF54862 82 213 1.26E-31 T 23-10-2018 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 Gene3D G3DSA:3.10.20.740 1 128 5.5E-29 T 23-10-2018 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 23-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06475 18bb58c9fcc1ff1fe9a4a46adfe7dcfc 892 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 23-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 265 281 3.4E-39 T 23-10-2018 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 307 318 3.4E-39 T 23-10-2018 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 3.4E-39 T 23-10-2018 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 3.4E-39 T 23-10-2018 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 282 299 3.4E-39 T 23-10-2018 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 Gene3D G3DSA:3.40.50.880 155 379 2.5E-70 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 SUPERFAMILY SSF52317 157 377 1.68E-60 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 376 1.7E-142 T 23-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 SUPERFAMILY SSF52021 4 144 1.07E-55 T 23-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 Gene3D G3DSA:3.50.30.20 3 154 4.6E-59 T 23-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 350 363 4.8E-11 T 23-10-2018 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 4.8E-11 T 23-10-2018 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 PRINTS PR00096 Glutamine amidotransferase superfamily signature 265 276 4.8E-11 T 23-10-2018 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 SMART SM01097 3 136 8.8E-91 T 23-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 379 46.685 T 23-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 Pfam PF00117 Glutamine amidotransferase class-I 196 373 2.6E-46 T 23-10-2018 IPR017926 Glutamine amidotransferase CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 PRINTS PR00097 Anthranilate synthase component II signature 235 244 1.5E-5 T 23-10-2018 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 PRINTS PR00097 Anthranilate synthase component II signature 265 276 1.5E-5 T 23-10-2018 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 PRINTS PR00097 Anthranilate synthase component II signature 350 363 1.5E-5 T 23-10-2018 CDG62_07030 8c5fe0f8658bbaabfb0e140dbb44aa48 380 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 135 1.8E-51 T 23-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CDG62_16550 75f0ddd37bb4a420f97b5b86b009d7b4 396 SUPERFAMILY SSF103473 8 385 9.02E-44 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_16550 75f0ddd37bb4a420f97b5b86b009d7b4 396 Gene3D G3DSA:1.20.1250.20 7 385 1.8E-38 T 23-10-2018 CDG62_16550 75f0ddd37bb4a420f97b5b86b009d7b4 396 Pfam PF07690 Major Facilitator Superfamily 19 327 2.3E-20 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_13825 430faeeeab06e379c96fc406d0747e0b 527 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 231 518 1.1E-72 T 23-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CDG62_13825 430faeeeab06e379c96fc406d0747e0b 527 Gene3D G3DSA:2.40.100.10 404 524 2.4E-38 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_13825 430faeeeab06e379c96fc406d0747e0b 527 SUPERFAMILY SSF50891 406 519 6.45E-16 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_13825 430faeeeab06e379c96fc406d0747e0b 527 SMART SM00796 1 192 8.6E-66 T 23-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CDG62_13825 430faeeeab06e379c96fc406d0747e0b 527 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 251 516 3.7E-73 T 23-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CDG62_13825 430faeeeab06e379c96fc406d0747e0b 527 SUPERFAMILY SSF50891 82 205 8.72E-34 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_13825 430faeeeab06e379c96fc406d0747e0b 527 SMART SM00797 250 527 2.8E-86 T 23-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CDG62_13825 430faeeeab06e379c96fc406d0747e0b 527 Gene3D G3DSA:3.30.1360.40 4 72 1.8E-11 T 23-10-2018 CDG62_13825 430faeeeab06e379c96fc406d0747e0b 527 SUPERFAMILY SSF160467 2 84 3.01E-7 T 23-10-2018 CDG62_13825 430faeeeab06e379c96fc406d0747e0b 527 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 1 192 2.1E-53 T 23-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CDG62_13825 430faeeeab06e379c96fc406d0747e0b 527 Gene3D G3DSA:2.40.100.10 74 204 4.7E-45 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_14385 d93c840804c10063066daa3e6469eb44 888 SUPERFAMILY SSF52218 428 577 1.35E-34 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_14385 d93c840804c10063066daa3e6469eb44 888 Pfam PF00258 Flavodoxin 436 561 5.1E-23 T 23-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CDG62_14385 d93c840804c10063066daa3e6469eb44 888 SUPERFAMILY SSF63380 588 747 1.97E-18 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG62_14385 d93c840804c10063066daa3e6469eb44 888 SUPERFAMILY SSF52343 749 888 1.96E-36 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_14385 d93c840804c10063066daa3e6469eb44 888 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 692 699 3.4E-9 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_14385 d93c840804c10063066daa3e6469eb44 888 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 756 775 3.4E-9 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_14385 d93c840804c10063066daa3e6469eb44 888 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 793 804 3.4E-9 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_14385 d93c840804c10063066daa3e6469eb44 888 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 847 855 3.4E-9 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_14385 d93c840804c10063066daa3e6469eb44 888 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 780 789 3.4E-9 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_14385 d93c840804c10063066daa3e6469eb44 888 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 824 840 3.4E-9 T 23-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CDG62_14385 d93c840804c10063066daa3e6469eb44 888 Pfam PF00175 Oxidoreductase NAD-binding domain 758 861 7.5E-12 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG62_14385 d93c840804c10063066daa3e6469eb44 888 Pfam PF03929 PepSY-associated TM region 7 408 2.5E-67 T 23-10-2018 IPR005625 PepSY-associated TM protein CDG62_14385 d93c840804c10063066daa3e6469eb44 888 Gene3D G3DSA:3.40.50.360 425 586 1.2E-34 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_14385 d93c840804c10063066daa3e6469eb44 888 Gene3D G3DSA:3.40.50.80 746 888 1.6E-40 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_14385 d93c840804c10063066daa3e6469eb44 888 PRINTS PR00369 Flavodoxin signature 435 448 6.9E-7 T 23-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CDG62_14385 d93c840804c10063066daa3e6469eb44 888 PRINTS PR00369 Flavodoxin signature 514 524 6.9E-7 T 23-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CDG62_14385 d93c840804c10063066daa3e6469eb44 888 PRINTS PR00369 Flavodoxin signature 483 494 6.9E-7 T 23-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CDG62_04295 8c034f777653f28acbbe76165e7717c1 153 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.3E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_04295 8c034f777653f28acbbe76165e7717c1 153 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 8.1E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_04295 8c034f777653f28acbbe76165e7717c1 153 SUPERFAMILY SSF54523 8 115 7.61E-16 T 23-10-2018 CDG62_04295 8c034f777653f28acbbe76165e7717c1 153 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 5 68 5.0E-13 T 23-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CDG62_04295 8c034f777653f28acbbe76165e7717c1 153 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_04295 8c034f777653f28acbbe76165e7717c1 153 Gene3D G3DSA:3.30.700.10 8 148 4.3E-15 T 23-10-2018 CDG62_11940 ed7bfc1b938128c2132ef3a6b818ecbd 888 PIRSF PIRSF006288 10 884 0.0 T 23-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CDG62_11940 ed7bfc1b938128c2132ef3a6b818ecbd 888 SUPERFAMILY SSF55021 809 872 1.12E-8 T 23-10-2018 CDG62_11940 ed7bfc1b938128c2132ef3a6b818ecbd 888 SUPERFAMILY SSF81301 39 166 2.52E-16 T 23-10-2018 CDG62_11940 ed7bfc1b938128c2132ef3a6b818ecbd 888 SMART SM00471 453 600 4.3E-4 T 23-10-2018 IPR003607 HD/PDEase domain CDG62_11940 ed7bfc1b938128c2132ef3a6b818ecbd 888 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 30 877 2.0E-266 T 23-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CDG62_11940 ed7bfc1b938128c2132ef3a6b818ecbd 888 Pfam PF01966 HD domain 490 586 2.6E-8 T 23-10-2018 IPR006674 HD domain CDG62_11940 ed7bfc1b938128c2132ef3a6b818ecbd 888 SUPERFAMILY SSF81593 190 312 3.3E-8 T 23-10-2018 CDG62_11940 ed7bfc1b938128c2132ef3a6b818ecbd 888 SUPERFAMILY SSF109604 424 546 2.51E-13 T 23-10-2018 CDG62_11940 ed7bfc1b938128c2132ef3a6b818ecbd 888 Pfam PF08335 GlnD PII-uridylyltransferase 175 317 3.0E-36 T 23-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CDG62_11940 ed7bfc1b938128c2132ef3a6b818ecbd 888 Gene3D G3DSA:1.10.3210.10 444 570 6.7E-10 T 23-10-2018 CDG62_11940 ed7bfc1b938128c2132ef3a6b818ecbd 888 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 888 281.985 T 23-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CDG62_11940 ed7bfc1b938128c2132ef3a6b818ecbd 888 Pfam PF01909 Nucleotidyltransferase domain 65 108 4.1E-6 T 23-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CDG62_11505 099b907ff98e7a4a190b88dd43417e50 163 Gene3D G3DSA:1.10.10.10 12 163 8.9E-35 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_11505 099b907ff98e7a4a190b88dd43417e50 163 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 23-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CDG62_11505 099b907ff98e7a4a190b88dd43417e50 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 1.0E-18 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG62_11505 099b907ff98e7a4a190b88dd43417e50 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 1.0E-18 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG62_11505 099b907ff98e7a4a190b88dd43417e50 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 1.0E-18 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG62_11505 099b907ff98e7a4a190b88dd43417e50 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 1.0E-18 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG62_11505 099b907ff98e7a4a190b88dd43417e50 163 SMART SM00347 44 145 1.9E-26 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG62_11505 099b907ff98e7a4a190b88dd43417e50 163 Pfam PF01047 MarR family 51 109 7.9E-14 T 23-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CDG62_11505 099b907ff98e7a4a190b88dd43417e50 163 SUPERFAMILY SSF46785 21 160 6.92E-33 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Gene3D G3DSA:1.10.290.10 301 425 6.1E-156 T 23-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Pfam PF01751 Toprim domain 25 164 1.5E-32 T 23-10-2018 IPR006171 TOPRIM domain CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Gene3D G3DSA:2.70.20.10 235 493 6.1E-156 T 23-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 SMART SM00436 155 243 3.2E-48 T 23-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 SUPERFAMILY SSF57783 718 757 1.02E-6 T 23-10-2018 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 SUPERFAMILY SSF57783 760 822 1.36E-14 T 23-10-2018 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 SMART SM00437 293 547 1.0E-122 T 23-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 SMART SM00493 23 154 1.8E-30 T 23-10-2018 IPR006171 TOPRIM domain CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 411 427 3.9E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 510 524 3.9E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 335 344 3.9E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 213 231 3.9E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 128 141 3.9E-37 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 SUPERFAMILY SSF57783 825 879 1.22E-16 T 23-10-2018 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Hamap MF_00952 DNA topoisomerase 1 [topA]. 23 750 54.539 T 23-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Gene3D G3DSA:1.10.460.10 187 591 6.1E-156 T 23-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 SUPERFAMILY SSF57783 601 640 9.69E-10 T 23-10-2018 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 330 344 - T 23-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Gene3D G3DSA:2.20.25.10 824 880 2.5E-21 T 23-10-2018 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Gene3D G3DSA:3.30.65.10 599 665 1.1E-6 T 23-10-2018 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Gene3D G3DSA:3.30.65.10 761 823 1.2E-20 T 23-10-2018 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Gene3D G3DSA:3.30.65.10 715 760 2.3E-7 T 23-10-2018 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 615 640 1.1E-4 T 23-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 729 760 7.1E-6 T 23-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Pfam PF08272 Topoisomerase I zinc-ribbon-like 840 879 5.4E-17 T 23-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Pfam PF08272 Topoisomerase I zinc-ribbon-like 774 809 9.9E-11 T 23-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Pfam PF01131 DNA topoisomerase 180 585 3.8E-127 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 Gene3D G3DSA:3.40.50.140 21 185 2.5E-66 T 23-10-2018 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 25 650 2.2E-242 T 23-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CDG62_17060 4d3c0f4d907e07793bba89911789b7b7 880 SUPERFAMILY SSF56712 24 627 3.92E-199 T 23-10-2018 IPR023405 DNA topoisomerase, type IA, core domain CDG62_08445 754ceac76571ec2f9089edca9f776d37 473 Pfam PF09190 DALR domain 349 411 2.0E-20 T 23-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CDG62_08445 754ceac76571ec2f9089edca9f776d37 473 Gene3D G3DSA:1.20.120.640 311 471 4.1E-41 T 23-10-2018 CDG62_08445 754ceac76571ec2f9089edca9f776d37 473 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 5 471 4.3E-177 T 23-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CDG62_08445 754ceac76571ec2f9089edca9f776d37 473 SUPERFAMILY SSF52374 6 316 1.69E-95 T 23-10-2018 CDG62_08445 754ceac76571ec2f9089edca9f776d37 473 SUPERFAMILY SSF47323 334 471 9.55E-35 T 23-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_08445 754ceac76571ec2f9089edca9f776d37 473 SMART SM00840 349 411 8.2E-22 T 23-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CDG62_08445 754ceac76571ec2f9089edca9f776d37 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 3.9E-31 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDG62_08445 754ceac76571ec2f9089edca9f776d37 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 3.9E-31 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDG62_08445 754ceac76571ec2f9089edca9f776d37 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 226 247 3.9E-31 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDG62_08445 754ceac76571ec2f9089edca9f776d37 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 195 213 3.9E-31 T 23-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CDG62_08445 754ceac76571ec2f9089edca9f776d37 473 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 19 317 1.2E-132 T 23-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CDG62_08445 754ceac76571ec2f9089edca9f776d37 473 Gene3D G3DSA:3.40.50.620 1 309 3.8E-136 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_08445 754ceac76571ec2f9089edca9f776d37 473 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 472 38.696 T 23-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CDG62_03660 f573d426a1c0cf5ef0a63c873391127d 434 Pfam PF00083 Sugar (and other) transporter 18 222 7.4E-26 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CDG62_03660 f573d426a1c0cf5ef0a63c873391127d 434 Gene3D G3DSA:1.20.1250.20 16 425 4.7E-55 T 23-10-2018 CDG62_03660 f573d426a1c0cf5ef0a63c873391127d 434 Pfam PF07690 Major Facilitator Superfamily 246 417 9.9E-10 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_03660 f573d426a1c0cf5ef0a63c873391127d 434 SUPERFAMILY SSF103473 11 421 8.63E-61 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_04925 44e8c36307f4e54e595ea68f71999927 270 SUPERFAMILY SSF46689 216 264 6.09E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_04925 44e8c36307f4e54e595ea68f71999927 270 Pfam PF02311 AraC-like ligand binding domain 32 147 3.5E-6 T 23-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CDG62_04925 44e8c36307f4e54e595ea68f71999927 270 SUPERFAMILY SSF51182 12 188 3.26E-12 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG62_04925 44e8c36307f4e54e595ea68f71999927 270 SMART SM00342 179 261 2.1E-18 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_04925 44e8c36307f4e54e595ea68f71999927 270 Gene3D G3DSA:1.10.10.60 160 269 4.7E-22 T 23-10-2018 CDG62_04925 44e8c36307f4e54e595ea68f71999927 270 Pfam PF12833 Helix-turn-helix domain 185 262 7.6E-19 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_04030 564374c1e122bb9cbd5c0e0f9b0a9b98 125 Pfam PF12568 Acetyltransferase (GNAT) domain 3 99 4.5E-10 T 23-10-2018 IPR000182 GNAT domain CDG62_04030 564374c1e122bb9cbd5c0e0f9b0a9b98 125 SUPERFAMILY SSF55729 1 108 6.92E-11 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_04030 564374c1e122bb9cbd5c0e0f9b0a9b98 125 Gene3D G3DSA:3.40.630.30 1 113 2.8E-17 T 23-10-2018 CDG62_07280 e9554648c954376f9008e551e4860215 547 Pfam PF13193 AMP-binding enzyme C-terminal domain 449 524 1.8E-13 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG62_07280 e9554648c954376f9008e551e4860215 547 SUPERFAMILY SSF56801 6 536 2.09E-127 T 23-10-2018 CDG62_07280 e9554648c954376f9008e551e4860215 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG62_07280 e9554648c954376f9008e551e4860215 547 Gene3D G3DSA:3.30.300.310 436 538 5.1E-29 T 23-10-2018 CDG62_07280 e9554648c954376f9008e551e4860215 547 Pfam PF00501 AMP-binding enzyme 17 440 8.0E-84 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG62_07280 e9554648c954376f9008e551e4860215 547 Gene3D G3DSA:3.40.50.12780 2 435 1.8E-112 T 23-10-2018 CDG62_06530 1ba7234733384d6e044c29ec03a58c52 292 SUPERFAMILY SSF46785 1 111 2.12E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_06530 1ba7234733384d6e044c29ec03a58c52 292 Gene3D G3DSA:3.40.190.290 92 292 1.9E-40 T 23-10-2018 CDG62_06530 1ba7234733384d6e044c29ec03a58c52 292 Pfam PF03466 LysR substrate binding domain 92 290 1.5E-47 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_06530 1ba7234733384d6e044c29ec03a58c52 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 8.3E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_06530 1ba7234733384d6e044c29ec03a58c52 292 Gene3D G3DSA:1.10.10.10 1 86 6.9E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_06530 1ba7234733384d6e044c29ec03a58c52 292 SUPERFAMILY SSF53850 93 290 3.37E-43 T 23-10-2018 CDG62_06530 1ba7234733384d6e044c29ec03a58c52 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.5E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_06530 1ba7234733384d6e044c29ec03a58c52 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.5E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_06530 1ba7234733384d6e044c29ec03a58c52 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.5E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_11460 be2bbc47d17a42b2a524c88434d2c107 373 Gene3D G3DSA:3.90.1200.10 121 353 2.0E-61 T 23-10-2018 CDG62_11460 be2bbc47d17a42b2a524c88434d2c107 373 Gene3D G3DSA:3.30.200.20 15 116 3.4E-27 T 23-10-2018 CDG62_11460 be2bbc47d17a42b2a524c88434d2c107 373 SUPERFAMILY SSF56112 17 344 3.28E-58 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_11460 be2bbc47d17a42b2a524c88434d2c107 373 Pfam PF01636 Phosphotransferase enzyme family 37 271 2.2E-39 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase CDG62_16875 9b15ce6125375a5729a02544d65ae654 386 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 19 372 1.6E-139 T 23-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 CDG62_16875 9b15ce6125375a5729a02544d65ae654 386 PIRSF PIRSF000443 2 382 3.2E-134 T 23-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 CDG62_16875 9b15ce6125375a5729a02544d65ae654 386 Pfam PF00561 alpha/beta hydrolase fold 49 358 1.3E-32 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_16875 9b15ce6125375a5729a02544d65ae654 386 Gene3D G3DSA:1.10.1740.110 186 291 6.6E-139 T 23-10-2018 CDG62_16875 9b15ce6125375a5729a02544d65ae654 386 SUPERFAMILY SSF53474 11 373 6.18E-101 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_16875 9b15ce6125375a5729a02544d65ae654 386 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 13 373 29.255 T 23-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 CDG62_16875 9b15ce6125375a5729a02544d65ae654 386 Gene3D G3DSA:3.40.50.1820 24 359 6.6E-139 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_03370 876ceca2109a96d4ff47487074756a8a 171 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 1 166 21.635 T 23-10-2018 IPR022920 Disulphide bond formation protein DsbB CDG62_03370 876ceca2109a96d4ff47487074756a8a 171 Pfam PF02600 Disulfide bond formation protein DsbB 6 158 2.7E-38 T 23-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CDG62_03370 876ceca2109a96d4ff47487074756a8a 171 Gene3D G3DSA:1.20.1550.10 3 171 1.4E-46 T 23-10-2018 IPR023380 DsbB-like superfamily CDG62_03370 876ceca2109a96d4ff47487074756a8a 171 SUPERFAMILY SSF158442 12 160 3.53E-37 T 23-10-2018 IPR023380 DsbB-like superfamily CDG62_08770 3c2bc940d325c12c7e3fe5cfb426cb54 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 23-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CDG62_08770 3c2bc940d325c12c7e3fe5cfb426cb54 362 SMART SM00937 63 178 1.4E-63 T 23-10-2018 IPR005139 Peptide chain release factor GO:0006415 CDG62_08770 3c2bc940d325c12c7e3fe5cfb426cb54 362 Gene3D G3DSA:3.30.70.1660 112 342 4.2E-95 T 23-10-2018 CDG62_08770 3c2bc940d325c12c7e3fe5cfb426cb54 362 Pfam PF00472 RF-1 domain 213 321 3.3E-40 T 23-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CDG62_08770 3c2bc940d325c12c7e3fe5cfb426cb54 362 SUPERFAMILY SSF75620 12 353 1.44E-134 T 23-10-2018 CDG62_08770 3c2bc940d325c12c7e3fe5cfb426cb54 362 Pfam PF03462 PCRF domain 13 203 2.3E-72 T 23-10-2018 IPR005139 Peptide chain release factor GO:0006415 CDG62_08770 3c2bc940d325c12c7e3fe5cfb426cb54 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.165 T 23-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CDG62_08770 3c2bc940d325c12c7e3fe5cfb426cb54 362 Gene3D G3DSA:3.30.160.20 210 297 4.2E-95 T 23-10-2018 CDG62_08770 3c2bc940d325c12c7e3fe5cfb426cb54 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 3.0E-161 T 23-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CDG62_04560 5cd3e6bb14c09a7ce848bd3ed7f791ae 276 Pfam PF00459 Inositol monophosphatase family 2 263 2.4E-65 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG62_04560 5cd3e6bb14c09a7ce848bd3ed7f791ae 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.4E-48 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG62_04560 5cd3e6bb14c09a7ce848bd3ed7f791ae 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 218 242 1.4E-48 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG62_04560 5cd3e6bb14c09a7ce848bd3ed7f791ae 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 134 157 1.4E-48 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG62_04560 5cd3e6bb14c09a7ce848bd3ed7f791ae 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 187 208 1.4E-48 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG62_04560 5cd3e6bb14c09a7ce848bd3ed7f791ae 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.4E-48 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG62_04560 5cd3e6bb14c09a7ce848bd3ed7f791ae 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 1.4E-48 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG62_04560 5cd3e6bb14c09a7ce848bd3ed7f791ae 276 SUPERFAMILY SSF56655 1 272 6.54E-75 T 23-10-2018 CDG62_04560 5cd3e6bb14c09a7ce848bd3ed7f791ae 276 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 23-10-2018 IPR020583 Inositol monophosphatase, metal-binding site CDG62_04560 5cd3e6bb14c09a7ce848bd3ed7f791ae 276 Gene3D G3DSA:3.40.190.80 145 271 6.8E-33 T 23-10-2018 CDG62_04560 5cd3e6bb14c09a7ce848bd3ed7f791ae 276 Gene3D G3DSA:3.30.540.10 1 144 4.2E-44 T 23-10-2018 CDG62_04560 5cd3e6bb14c09a7ce848bd3ed7f791ae 276 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 221 235 - T 23-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CDG62_02635 060bb7facc33099ef0d2eede00a461e0 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 318 3.4E-18 T 23-10-2018 CDG62_02635 060bb7facc33099ef0d2eede00a461e0 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 3.4E-18 T 23-10-2018 CDG62_02635 060bb7facc33099ef0d2eede00a461e0 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 318 334 3.4E-18 T 23-10-2018 CDG62_02635 060bb7facc33099ef0d2eede00a461e0 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.4E-18 T 23-10-2018 CDG62_02635 060bb7facc33099ef0d2eede00a461e0 429 TIGRFAM TIGR03219 salicylate_mono: salicylate 1-monooxygenase 5 416 1.6E-183 T 23-10-2018 IPR017631 Salicylate 1-monooxygenase KEGG: 00621+1.14.13.1|KEGG: 00624+1.14.13.1|KEGG: 00626+1.14.13.1|MetaCyc: PWY-6107|MetaCyc: PWY-6183|MetaCyc: PWY-6184 CDG62_02635 060bb7facc33099ef0d2eede00a461e0 429 SUPERFAMILY SSF54373 182 292 2.43E-14 T 23-10-2018 CDG62_02635 060bb7facc33099ef0d2eede00a461e0 429 SUPERFAMILY SSF51905 5 404 4.1E-51 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_02635 060bb7facc33099ef0d2eede00a461e0 429 Pfam PF01494 FAD binding domain 5 366 4.2E-18 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 CDG62_02635 060bb7facc33099ef0d2eede00a461e0 429 Gene3D G3DSA:3.30.9.30 40 379 2.3E-100 T 23-10-2018 CDG62_02635 060bb7facc33099ef0d2eede00a461e0 429 Gene3D G3DSA:3.50.50.60 7 371 2.3E-100 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_17150 124f52c9e02d2c16ffdf32c2bff09842 359 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 23-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CDG62_17150 124f52c9e02d2c16ffdf32c2bff09842 359 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 353 4.3E-157 T 23-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CDG62_17150 124f52c9e02d2c16ffdf32c2bff09842 359 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 358 51.399 T 23-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CDG62_17150 124f52c9e02d2c16ffdf32c2bff09842 359 Gene3D G3DSA:3.40.718.10 2 359 1.9E-144 T 23-10-2018 CDG62_17150 124f52c9e02d2c16ffdf32c2bff09842 359 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 354 4.1E-135 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CDG62_17150 124f52c9e02d2c16ffdf32c2bff09842 359 SUPERFAMILY SSF53659 1 358 9.28E-120 T 23-10-2018 CDG62_17150 124f52c9e02d2c16ffdf32c2bff09842 359 SMART SM01329 4 354 4.6E-196 T 23-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CDG62_15990 21180e72a6c4af63cb858fd5476dc22c 119 Pfam PF01042 Endoribonuclease L-PSP 17 117 6.8E-21 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CDG62_15990 21180e72a6c4af63cb858fd5476dc22c 119 SUPERFAMILY SSF55298 14 118 2.98E-26 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG62_15990 21180e72a6c4af63cb858fd5476dc22c 119 Gene3D G3DSA:3.30.1330.40 1 119 1.4E-33 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG62_04565 c96c475d0927686611f3a71bac39159a 620 SMART SM00490 268 349 5.6E-32 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_04565 c96c475d0927686611f3a71bac39159a 620 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 162 170 - T 23-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDG62_04565 c96c475d0927686611f3a71bac39159a 620 Pfam PF00270 DEAD/DEAH box helicase 27 199 1.1E-43 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDG62_04565 c96c475d0927686611f3a71bac39159a 620 SUPERFAMILY SSF52540 84 370 2.7E-67 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_04565 c96c475d0927686611f3a71bac39159a 620 Gene3D G3DSA:3.40.50.300 228 389 1.4E-47 T 23-10-2018 CDG62_04565 c96c475d0927686611f3a71bac39159a 620 SMART SM00487 22 231 2.2E-51 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG62_04565 c96c475d0927686611f3a71bac39159a 620 Pfam PF00271 Helicase conserved C-terminal domain 244 349 9.3E-26 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_04565 c96c475d0927686611f3a71bac39159a 620 Gene3D G3DSA:3.40.50.300 1 227 9.8E-71 T 23-10-2018 CDG62_07520 6535e1e5bef6231e310e93bc6a78c370 249 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 23-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CDG62_07520 6535e1e5bef6231e310e93bc6a78c370 249 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 160 184 - T 23-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CDG62_07520 6535e1e5bef6231e310e93bc6a78c370 249 Gene3D G3DSA:1.10.287.610 105 152 1.4E-92 T 23-10-2018 CDG62_07520 6535e1e5bef6231e310e93bc6a78c370 249 PRINTS PR00395 Ribosomal protein S2 signature 198 212 6.7E-36 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_07520 6535e1e5bef6231e310e93bc6a78c370 249 PRINTS PR00395 Ribosomal protein S2 signature 89 106 6.7E-36 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_07520 6535e1e5bef6231e310e93bc6a78c370 249 PRINTS PR00395 Ribosomal protein S2 signature 8 26 6.7E-36 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_07520 6535e1e5bef6231e310e93bc6a78c370 249 PRINTS PR00395 Ribosomal protein S2 signature 177 188 6.7E-36 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_07520 6535e1e5bef6231e310e93bc6a78c370 249 PRINTS PR00395 Ribosomal protein S2 signature 160 177 6.7E-36 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_07520 6535e1e5bef6231e310e93bc6a78c370 249 PRINTS PR00395 Ribosomal protein S2 signature 39 48 6.7E-36 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_07520 6535e1e5bef6231e310e93bc6a78c370 249 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 6 228 4.0E-104 T 23-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_07520 6535e1e5bef6231e310e93bc6a78c370 249 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 227 41.239 T 23-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_07520 6535e1e5bef6231e310e93bc6a78c370 249 Gene3D G3DSA:3.40.50.10490 11 221 1.4E-92 T 23-10-2018 CDG62_07520 6535e1e5bef6231e310e93bc6a78c370 249 SUPERFAMILY SSF52313 8 238 9.68E-95 T 23-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CDG62_07520 6535e1e5bef6231e310e93bc6a78c370 249 Pfam PF00318 Ribosomal protein S2 11 226 6.9E-95 T 23-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_17700 3c2bf52e962f6f26fa17a2a7289ea0b9 570 SUPERFAMILY SSF52540 181 568 1.37E-97 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17700 3c2bf52e962f6f26fa17a2a7289ea0b9 570 SUPERFAMILY SSF160246 9 147 1.28E-30 T 23-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily CDG62_17700 3c2bf52e962f6f26fa17a2a7289ea0b9 570 Gene3D G3DSA:3.30.450.90 154 292 7.3E-48 T 23-10-2018 CDG62_17700 3c2bf52e962f6f26fa17a2a7289ea0b9 570 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 13 569 4.9E-263 T 23-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 CDG62_17700 3c2bf52e962f6f26fa17a2a7289ea0b9 570 Gene3D G3DSA:3.40.50.300 295 570 5.6E-104 T 23-10-2018 CDG62_17700 3c2bf52e962f6f26fa17a2a7289ea0b9 570 Gene3D G3DSA:3.30.300.160 70 148 1.8E-5 T 23-10-2018 CDG62_17700 3c2bf52e962f6f26fa17a2a7289ea0b9 570 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 387 401 - T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG62_17700 3c2bf52e962f6f26fa17a2a7289ea0b9 570 Pfam PF00437 Type II/IV secretion system protein 193 459 1.4E-89 T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG62_17700 3c2bf52e962f6f26fa17a2a7289ea0b9 570 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 46 150 1.3E-13 T 23-10-2018 IPR007831 General secretory system II, protein E, N-terminal CDG62_08365 65d76738ff2416f2f8d73552d4432c01 243 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 8 236 1.6E-92 T 23-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CDG62_08365 65d76738ff2416f2f8d73552d4432c01 243 Gene3D G3DSA:3.60.15.10 4 243 4.0E-76 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_08365 65d76738ff2416f2f8d73552d4432c01 243 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 5 243 39.947 T 23-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CDG62_08365 65d76738ff2416f2f8d73552d4432c01 243 Pfam PF00753 Metallo-beta-lactamase superfamily 15 173 5.6E-12 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_08365 65d76738ff2416f2f8d73552d4432c01 243 PIRSF PIRSF005457 1 242 1.9E-91 T 23-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CDG62_08365 65d76738ff2416f2f8d73552d4432c01 243 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 174 243 1.6E-20 T 23-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CDG62_08365 65d76738ff2416f2f8d73552d4432c01 243 SMART SM00849 15 173 3.6E-32 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_08365 65d76738ff2416f2f8d73552d4432c01 243 SUPERFAMILY SSF56281 5 242 5.32E-63 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_07650 7766fcf85479bed1510749c9da7c0923 286 SUPERFAMILY SSF103481 182 282 5.23E-10 T 23-10-2018 CDG62_07650 7766fcf85479bed1510749c9da7c0923 286 SUPERFAMILY SSF103481 41 132 4.18E-7 T 23-10-2018 CDG62_07650 7766fcf85479bed1510749c9da7c0923 286 Pfam PF00892 EamA-like transporter family 148 281 3.8E-15 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_07650 7766fcf85479bed1510749c9da7c0923 286 Pfam PF00892 EamA-like transporter family 6 134 6.4E-13 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_10930 66372f520502057a2fa814d05a0d16ea 151 Gene3D G3DSA:1.10.1220.10 14 46 1.2E-5 T 23-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CDG62_10930 66372f520502057a2fa814d05a0d16ea 151 Gene3D G3DSA:3.30.70.1150 53 136 1.0E-19 T 23-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CDG62_10930 66372f520502057a2fa814d05a0d16ea 151 SUPERFAMILY SSF55021 56 134 2.52E-16 T 23-10-2018 CDG62_10930 66372f520502057a2fa814d05a0d16ea 151 Pfam PF08753 NikR C terminal nickel binding domain 57 132 5.4E-19 T 23-10-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal CDG62_10930 66372f520502057a2fa814d05a0d16ea 151 SUPERFAMILY SSF47598 5 49 3.11E-5 T 23-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 CDG62_05190 1d78f769f778545e5c78ee2cb3edec74 352 SUPERFAMILY SSF52540 128 347 1.02E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_05190 1d78f769f778545e5c78ee2cb3edec74 352 Pfam PF03193 RsgA GTPase 114 285 6.3E-49 T 23-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 CDG62_05190 1d78f769f778545e5c78ee2cb3edec74 352 Gene3D G3DSA:2.40.50.140 32 116 1.1E-17 T 23-10-2018 CDG62_05190 1d78f769f778545e5c78ee2cb3edec74 352 Gene3D G3DSA:3.40.50.300 117 284 2.0E-43 T 23-10-2018 CDG62_05190 1d78f769f778545e5c78ee2cb3edec74 352 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 34 349 32.649 T 23-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CDG62_05190 1d78f769f778545e5c78ee2cb3edec74 352 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 92 342 8.1E-68 T 23-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CDG62_05190 1d78f769f778545e5c78ee2cb3edec74 352 Gene3D G3DSA:1.10.40.50 285 352 6.3E-22 T 23-10-2018 CDG62_05630 599efd8f035324300d030afed4fa077c 340 SMART SM00342 255 336 2.8E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_05630 599efd8f035324300d030afed4fa077c 340 Pfam PF12833 Helix-turn-helix domain 261 338 5.7E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_05630 599efd8f035324300d030afed4fa077c 340 Gene3D G3DSA:1.10.10.60 235 340 5.8E-21 T 23-10-2018 CDG62_05630 599efd8f035324300d030afed4fa077c 340 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 51 207 7.0E-22 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG62_05630 599efd8f035324300d030afed4fa077c 340 SUPERFAMILY SSF46689 291 338 1.25E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_11655 a2ec9b3fdb17b7e91cb6b8825fb855b7 103 Gene3D G3DSA:3.30.1420.10 1 30 9.3E-8 T 23-10-2018 CDG62_11655 a2ec9b3fdb17b7e91cb6b8825fb855b7 103 PIRSF PIRSF006223 1 103 3.4E-21 T 23-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE CDG62_11655 a2ec9b3fdb17b7e91cb6b8825fb855b7 103 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 103 5.2E-26 T 23-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE CDG62_11655 a2ec9b3fdb17b7e91cb6b8825fb855b7 103 SUPERFAMILY SSF69721 2 103 1.14E-28 T 23-10-2018 IPR025526 DsrC-like domain superfamily CDG62_11655 a2ec9b3fdb17b7e91cb6b8825fb855b7 103 Pfam PF04358 DsrC like protein 2 103 2.6E-27 T 23-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE CDG62_11655 a2ec9b3fdb17b7e91cb6b8825fb855b7 103 Gene3D G3DSA:1.10.10.370 33 103 8.6E-18 T 23-10-2018 CDG62_04020 ecbd898b60c265e12b7601f3d768c34b 205 SUPERFAMILY SSF52317 2 203 4.17E-58 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_04020 ecbd898b60c265e12b7601f3d768c34b 205 Pfam PF00117 Glutamine amidotransferase class-I 6 200 4.2E-22 T 23-10-2018 IPR017926 Glutamine amidotransferase CDG62_04020 ecbd898b60c265e12b7601f3d768c34b 205 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 203 34.985 T 23-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CDG62_04020 ecbd898b60c265e12b7601f3d768c34b 205 Gene3D G3DSA:3.40.50.880 1 205 8.9E-77 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_04020 ecbd898b60c265e12b7601f3d768c34b 205 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 203 1.6E-69 T 23-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CDG62_04020 ecbd898b60c265e12b7601f3d768c34b 205 PIRSF PIRSF000495 2 205 2.5E-70 T 23-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CDG62_11875 ca936fa18b02f214ab1bb6910083ac79 472 PIRSF PIRSF000337 10 452 8.2E-132 T 23-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CDG62_11875 ca936fa18b02f214ab1bb6910083ac79 472 SUPERFAMILY SSF51679 10 442 5.23E-117 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG62_11875 ca936fa18b02f214ab1bb6910083ac79 472 Pfam PF00296 Luciferase-like monooxygenase 35 396 3.9E-56 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CDG62_11875 ca936fa18b02f214ab1bb6910083ac79 472 Gene3D G3DSA:3.20.20.30 10 461 6.2E-138 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG62_11875 ca936fa18b02f214ab1bb6910083ac79 472 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 15 438 2.5E-153 T 23-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CDG62_18515 b8f402eae0a77f45aec13cf28881bda6 291 ProSitePatterns PS00449 ATP synthase a subunit signature. 227 236 - T 23-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18515 b8f402eae0a77f45aec13cf28881bda6 291 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 46 286 5.0E-41 T 23-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18515 b8f402eae0a77f45aec13cf28881bda6 291 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 291 15.801 T 23-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18515 b8f402eae0a77f45aec13cf28881bda6 291 Gene3D G3DSA:1.20.120.220 102 291 3.1E-60 T 23-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18515 b8f402eae0a77f45aec13cf28881bda6 291 SUPERFAMILY SSF81336 103 285 7.85E-42 T 23-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18515 b8f402eae0a77f45aec13cf28881bda6 291 Pfam PF00119 ATP synthase A chain 55 285 2.6E-56 T 23-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_12490 8bb76275c053aa8e15efeead54ac5838 314 Pfam PF03466 LysR substrate binding domain 94 301 8.8E-41 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_12490 8bb76275c053aa8e15efeead54ac5838 314 Gene3D G3DSA:1.10.10.10 9 93 9.6E-26 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_12490 8bb76275c053aa8e15efeead54ac5838 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.3E-18 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_12490 8bb76275c053aa8e15efeead54ac5838 314 Gene3D G3DSA:3.40.190.290 97 301 1.5E-61 T 23-10-2018 CDG62_12490 8bb76275c053aa8e15efeead54ac5838 314 SUPERFAMILY SSF53850 95 302 5.79E-41 T 23-10-2018 CDG62_12490 8bb76275c053aa8e15efeead54ac5838 314 SUPERFAMILY SSF46785 11 118 5.1E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_15075 c70fe66444baf3ce1ebabd6b1d532b25 293 Gene3D G3DSA:1.10.10.10 1 90 1.4E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15075 c70fe66444baf3ce1ebabd6b1d532b25 293 Pfam PF03466 LysR substrate binding domain 89 286 6.2E-37 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_15075 c70fe66444baf3ce1ebabd6b1d532b25 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_15075 c70fe66444baf3ce1ebabd6b1d532b25 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_15075 c70fe66444baf3ce1ebabd6b1d532b25 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_15075 c70fe66444baf3ce1ebabd6b1d532b25 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.0E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_15075 c70fe66444baf3ce1ebabd6b1d532b25 293 SUPERFAMILY SSF53850 90 287 1.71E-36 T 23-10-2018 CDG62_15075 c70fe66444baf3ce1ebabd6b1d532b25 293 SUPERFAMILY SSF46785 1 83 6.65E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_15075 c70fe66444baf3ce1ebabd6b1d532b25 293 Gene3D G3DSA:3.40.190.290 91 291 3.5E-44 T 23-10-2018 CDG62_06920 62682fbcbdce763c6670dff6d088ca2a 121 SUPERFAMILY SSF81343 4 119 1.34E-25 T 23-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_06920 62682fbcbdce763c6670dff6d088ca2a 121 Gene3D G3DSA:1.20.1300.10 1 120 5.4E-29 T 23-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_06920 62682fbcbdce763c6670dff6d088ca2a 121 PIRSF PIRSF000169 1 121 2.9E-39 T 23-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CDG62_06920 62682fbcbdce763c6670dff6d088ca2a 121 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 12 106 2.0E-7 T 23-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_06920 62682fbcbdce763c6670dff6d088ca2a 121 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 9 119 1.3E-33 T 23-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 Gene3D G3DSA:1.10.290.10 257 374 2.5E-96 T 23-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 286 300 - T 23-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 79 92 1.9E-24 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 360 376 1.9E-24 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 164 182 1.9E-24 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 489 503 1.9E-24 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 291 300 1.9E-24 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 SMART SM00493 2 105 1.4E-18 T 23-10-2018 IPR006171 TOPRIM domain CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 Gene3D G3DSA:1.10.460.10 138 566 2.5E-96 T 23-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 SMART SM00436 106 194 1.6E-12 T 23-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 SUPERFAMILY SSF56712 1 596 1.83E-128 T 23-10-2018 IPR023405 DNA topoisomerase, type IA, core domain CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 Pfam PF01751 Toprim domain 4 115 5.4E-23 T 23-10-2018 IPR006171 TOPRIM domain CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 SMART SM00437 249 526 1.0E-66 T 23-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 Pfam PF01131 DNA topoisomerase 130 560 9.0E-83 T 23-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 Gene3D G3DSA:2.70.20.10 186 472 2.5E-96 T 23-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CDG62_02390 0f15dfb7cfb2a942b15215ed15a0cecc 887 Gene3D G3DSA:3.40.50.140 1 136 4.5E-38 T 23-10-2018 CDG62_10075 9e76cc15885977b43893195a7e0fe51d 158 SUPERFAMILY SSF52540 30 127 1.0E-17 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10075 9e76cc15885977b43893195a7e0fe51d 158 Gene3D G3DSA:3.40.50.300 3 153 1.7E-38 T 23-10-2018 CDG62_10075 9e76cc15885977b43893195a7e0fe51d 158 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 131 2.2E-36 T 23-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CDG62_10075 9e76cc15885977b43893195a7e0fe51d 158 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 133 1.5E-39 T 23-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CDG62_09445 c1b52736a81aaa705a89995fb14e09dd 132 Pfam PF00576 HIUase/Transthyretin family 23 131 4.6E-38 T 23-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_09445 c1b52736a81aaa705a89995fb14e09dd 132 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 21 132 4.8E-43 T 23-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CDG62_09445 c1b52736a81aaa705a89995fb14e09dd 132 PRINTS PR00189 Transthyretin signature 110 132 9.4E-12 T 23-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_09445 c1b52736a81aaa705a89995fb14e09dd 132 PRINTS PR00189 Transthyretin signature 54 79 9.4E-12 T 23-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_09445 c1b52736a81aaa705a89995fb14e09dd 132 PRINTS PR00189 Transthyretin signature 22 42 9.4E-12 T 23-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_09445 c1b52736a81aaa705a89995fb14e09dd 132 ProSitePatterns PS00769 Transthyretin signature 2. 115 127 - T 23-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_09445 c1b52736a81aaa705a89995fb14e09dd 132 Gene3D G3DSA:2.60.40.180 18 132 3.3E-41 T 23-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_09445 c1b52736a81aaa705a89995fb14e09dd 132 SMART SM00095 19 131 8.6E-4 T 23-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_09445 c1b52736a81aaa705a89995fb14e09dd 132 SUPERFAMILY SSF49472 19 132 6.93E-41 T 23-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CDG62_11155 3d6d657707a4373a7fff00c590a116ea 302 SUPERFAMILY SSF160240 217 289 1.83E-6 T 23-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 CDG62_11155 3d6d657707a4373a7fff00c590a116ea 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 19 292 5.0E-89 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG62_11155 3d6d657707a4373a7fff00c590a116ea 302 SUPERFAMILY SSF161111 19 214 2.62E-59 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG62_11155 3d6d657707a4373a7fff00c590a116ea 302 Gene3D G3DSA:1.20.1510.10 18 213 4.5E-49 T 23-10-2018 IPR027469 Cation efflux transmembrane domain superfamily CDG62_11155 3d6d657707a4373a7fff00c590a116ea 302 Pfam PF01545 Cation efflux family 22 213 9.0E-49 T 23-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CDG62_04140 8a260eeee3809c69194c0fe81650018e 110 Pfam PF04999 Cell division protein FtsL 21 101 1.2E-26 T 23-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CDG62_04140 8a260eeee3809c69194c0fe81650018e 110 Hamap MF_00910 Cell division protein FtsL [ftsL]. 16 100 13.563 T 23-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CDG62_04140 8a260eeee3809c69194c0fe81650018e 110 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 100 6.3E-13 T 23-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 CDG62_02690 85402b121b91337765b5a6dae905baf8 504 Gene3D G3DSA:1.20.1250.20 265 502 8.2E-11 T 23-10-2018 CDG62_02690 85402b121b91337765b5a6dae905baf8 504 Pfam PF07690 Major Facilitator Superfamily 18 409 2.0E-41 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_02690 85402b121b91337765b5a6dae905baf8 504 SUPERFAMILY SSF103473 7 495 3.14E-56 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_02690 85402b121b91337765b5a6dae905baf8 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 76 98 2.9E-6 T 23-10-2018 CDG62_02690 85402b121b91337765b5a6dae905baf8 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 163 187 2.9E-6 T 23-10-2018 CDG62_02690 85402b121b91337765b5a6dae905baf8 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 2.9E-6 T 23-10-2018 CDG62_02690 85402b121b91337765b5a6dae905baf8 504 Gene3D G3DSA:1.20.1720.10 12 239 2.7E-39 T 23-10-2018 CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 Pfam PF00672 HAMP domain 88 137 2.6E-9 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 SMART SM00388 142 206 6.5E-5 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 SMART SM00304 87 141 7.6E-11 T 23-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 Gene3D G3DSA:1.20.1480.50 61 142 2.3E-9 T 23-10-2018 CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 SUPERFAMILY SSF158472 88 137 1.27E-6 T 23-10-2018 CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 Pfam PF00512 His Kinase A (phospho-acceptor) domain 148 205 1.7E-6 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 Gene3D G3DSA:1.10.287.130 143 207 9.4E-9 T 23-10-2018 CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 314 5.7E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 339 5.7E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 5.7E-12 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 SUPERFAMILY SSF55874 195 356 4.32E-36 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 SUPERFAMILY SSF47384 125 207 5.89E-11 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 Gene3D G3DSA:3.30.565.10 208 359 1.1E-36 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 SMART SM00387 250 359 1.8E-28 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_02715 06f3c86ef160fc42e385f4a85aa503db 359 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 251 356 1.2E-19 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_04955 324b170b4c71eb90d8e736a56b847679 191 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 3 190 4.8E-83 T 23-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 CDG62_04955 324b170b4c71eb90d8e736a56b847679 191 Gene3D G3DSA:3.40.50.2020 3 188 5.2E-51 T 23-10-2018 CDG62_04955 324b170b4c71eb90d8e736a56b847679 191 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 41.311 T 23-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 CDG62_04955 324b170b4c71eb90d8e736a56b847679 191 SUPERFAMILY SSF53271 4 187 3.21E-44 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG62_07150 d4b3a603748cf6d47af32e56e02bd2e5 301 Hamap MF_00188 Protease HtpX [htpX]. 1 298 25.449 T 23-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CDG62_07150 d4b3a603748cf6d47af32e56e02bd2e5 301 Gene3D G3DSA:3.30.2010.10 74 165 1.4E-33 T 23-10-2018 CDG62_07150 d4b3a603748cf6d47af32e56e02bd2e5 301 Pfam PF01435 Peptidase family M48 81 298 2.4E-41 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDG62_01390 c6bf16492bb512a85a55fc4aa0288cea 518 SUPERFAMILY SSF52540 4 497 5.01E-55 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_01390 c6bf16492bb512a85a55fc4aa0288cea 518 Gene3D G3DSA:1.10.486.10 383 436 3.7E-14 T 23-10-2018 CDG62_01390 c6bf16492bb512a85a55fc4aa0288cea 518 Pfam PF13361 UvrD-like helicase C-terminal domain 386 497 8.6E-14 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDG62_01390 c6bf16492bb512a85a55fc4aa0288cea 518 Pfam PF13245 AAA domain 14 259 3.6E-17 T 23-10-2018 CDG62_01390 c6bf16492bb512a85a55fc4aa0288cea 518 Gene3D G3DSA:3.40.50.300 437 497 3.7E-14 T 23-10-2018 CDG62_04815 0f49c7efa14e2c6381fec15765cd6b31 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 34.954 T 23-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDG62_04815 0f49c7efa14e2c6381fec15765cd6b31 208 Pfam PF01479 S4 domain 99 145 5.7E-18 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04815 0f49c7efa14e2c6381fec15765cd6b31 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 23-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04815 0f49c7efa14e2c6381fec15765cd6b31 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 4.7E-31 T 23-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CDG62_04815 0f49c7efa14e2c6381fec15765cd6b31 208 Gene3D G3DSA:1.10.1050.10 6 208 7.0E-78 T 23-10-2018 CDG62_04815 0f49c7efa14e2c6381fec15765cd6b31 208 SMART SM01390 3 97 1.3E-45 T 23-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CDG62_04815 0f49c7efa14e2c6381fec15765cd6b31 208 Gene3D G3DSA:3.10.290.10 97 193 7.0E-78 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDG62_04815 0f49c7efa14e2c6381fec15765cd6b31 208 SMART SM00363 98 162 1.7E-16 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04815 0f49c7efa14e2c6381fec15765cd6b31 208 SUPERFAMILY SSF55174 2 208 1.7E-66 T 23-10-2018 CDG62_04815 0f49c7efa14e2c6381fec15765cd6b31 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 8.3E-80 T 23-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDG62_08055 c987b27842f4869348f6be969f8d4f1f 734 PIRSF PIRSF037618 5 733 1.7E-287 T 23-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 CDG62_08055 c987b27842f4869348f6be969f8d4f1f 734 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 505 685 1.7E-19 T 23-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CDG62_08055 c987b27842f4869348f6be969f8d4f1f 734 Gene3D G3DSA:3.40.50.150 512 731 7.6E-69 T 23-10-2018 CDG62_08055 c987b27842f4869348f6be969f8d4f1f 734 Gene3D G3DSA:3.30.2130.30 12 269 9.0E-114 T 23-10-2018 CDG62_08055 c987b27842f4869348f6be969f8d4f1f 734 SUPERFAMILY SSF53335 162 367 8.03E-31 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_08055 c987b27842f4869348f6be969f8d4f1f 734 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 210 221 - T 23-10-2018 IPR000241 Putative RNA methylase domain CDG62_08055 c987b27842f4869348f6be969f8d4f1f 734 Pfam PF02926 THUMP domain 40 153 2.2E-10 T 23-10-2018 IPR004114 THUMP domain GO:0003723 CDG62_08055 c987b27842f4869348f6be969f8d4f1f 734 SMART SM00981 70 167 2.7E-8 T 23-10-2018 IPR004114 THUMP domain GO:0003723 CDG62_08055 c987b27842f4869348f6be969f8d4f1f 734 Gene3D G3DSA:3.40.50.150 182 387 9.0E-114 T 23-10-2018 CDG62_08055 c987b27842f4869348f6be969f8d4f1f 734 Gene3D G3DSA:3.30.750.80 420 511 8.5E-34 T 23-10-2018 CDG62_08055 c987b27842f4869348f6be969f8d4f1f 734 SUPERFAMILY SSF53335 423 733 1.35E-63 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_08055 c987b27842f4869348f6be969f8d4f1f 734 Pfam PF01170 Putative RNA methylase family UPF0020 175 388 3.9E-38 T 23-10-2018 IPR000241 Putative RNA methylase domain CDG62_08055 c987b27842f4869348f6be969f8d4f1f 734 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 10 732 29.562 T 23-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 CDG62_08055 c987b27842f4869348f6be969f8d4f1f 734 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 323 329 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG62_19205 002ca1bd56552da63345287fd86c71ad 175 SUPERFAMILY SSF53271 4 173 9.31E-51 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG62_19205 002ca1bd56552da63345287fd86c71ad 175 Pfam PF00156 Phosphoribosyl transferase domain 13 160 3.4E-24 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDG62_19205 002ca1bd56552da63345287fd86c71ad 175 Gene3D G3DSA:3.40.50.2020 1 175 5.3E-62 T 23-10-2018 CDG62_19205 002ca1bd56552da63345287fd86c71ad 175 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 2.7E-66 T 23-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 CDG62_09405 7938966d46629492ca54673bcd37406c 329 PIRSF PIRSF001619 1 318 7.7E-139 T 23-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG62_09405 7938966d46629492ca54673bcd37406c 329 SUPERFAMILY SSF102114 5 310 2.35E-90 T 23-10-2018 CDG62_09405 7938966d46629492ca54673bcd37406c 329 SMART SM00876 220 312 2.8E-41 T 23-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG62_09405 7938966d46629492ca54673bcd37406c 329 Hamap MF_01694 Biotin synthase [bioB]. 5 313 42.227 T 23-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG62_09405 7938966d46629492ca54673bcd37406c 329 Gene3D G3DSA:3.20.20.70 4 314 2.7E-129 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_09405 7938966d46629492ca54673bcd37406c 329 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 4.6E-122 T 23-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG62_09405 7938966d46629492ca54673bcd37406c 329 SMART SM00729 43 250 8.6E-42 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG62_09405 7938966d46629492ca54673bcd37406c 329 Pfam PF04055 Radical SAM superfamily 50 207 3.1E-14 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG62_09405 7938966d46629492ca54673bcd37406c 329 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 3.0E-18 T 23-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CDG62_08040 8c4e47c9146cfeaf4a7a9089250466d6 140 Gene3D G3DSA:2.20.25.10 1 32 1.2E-7 T 23-10-2018 CDG62_08040 8c4e47c9146cfeaf4a7a9089250466d6 140 Gene3D G3DSA:3.30.300.20 39 139 1.2E-29 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG62_08040 8c4e47c9146cfeaf4a7a9089250466d6 140 SUPERFAMILY SSF82784 1 138 2.36E-40 T 23-10-2018 IPR036102 OsmC/Ohr superfamily CDG62_08040 8c4e47c9146cfeaf4a7a9089250466d6 140 Pfam PF02566 OsmC-like protein 33 132 1.5E-20 T 23-10-2018 IPR003718 OsmC/Ohr family CDG62_11085 16c5971c051fc329ee018e437d3cdd94 352 SUPERFAMILY SSF53774 24 351 6.15E-91 T 23-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 CDG62_11085 16c5971c051fc329ee018e437d3cdd94 352 PRINTS PR00139 Asparaginase/glutaminase family signature 106 124 1.0E-21 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG62_11085 16c5971c051fc329ee018e437d3cdd94 352 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 1.0E-21 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG62_11085 16c5971c051fc329ee018e437d3cdd94 352 PRINTS PR00139 Asparaginase/glutaminase family signature 286 304 1.0E-21 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG62_11085 16c5971c051fc329ee018e437d3cdd94 352 Gene3D G3DSA:3.40.50.1170 23 238 1.2E-85 T 23-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 CDG62_11085 16c5971c051fc329ee018e437d3cdd94 352 PIRSF PIRSF500176 22 352 5.7E-82 T 23-10-2018 CDG62_11085 16c5971c051fc329ee018e437d3cdd94 352 PIRSF PIRSF001220 21 352 4.1E-87 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG62_11085 16c5971c051fc329ee018e437d3cdd94 352 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 24 352 2.9E-112 T 23-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 CDG62_11085 16c5971c051fc329ee018e437d3cdd94 352 SMART SM00870 25 346 8.6E-123 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG62_11085 16c5971c051fc329ee018e437d3cdd94 352 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 23-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CDG62_11085 16c5971c051fc329ee018e437d3cdd94 352 Pfam PF00710 Asparaginase, N-terminal 25 216 8.1E-52 T 23-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CDG62_11085 16c5971c051fc329ee018e437d3cdd94 352 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 107 117 - T 23-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CDG62_11085 16c5971c051fc329ee018e437d3cdd94 352 Gene3D G3DSA:3.40.50.40 239 352 2.5E-34 T 23-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 CDG62_09460 c604be297bebd2819751866c25d12708 262 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 7 180 2.3E-47 T 23-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDG62_09460 c604be297bebd2819751866c25d12708 262 SUPERFAMILY SSF55120 3 190 3.04E-35 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_09460 c604be297bebd2819751866c25d12708 262 Gene3D G3DSA:3.30.70.1560 67 167 9.9E-40 T 23-10-2018 CDG62_09460 c604be297bebd2819751866c25d12708 262 Pfam PF00849 RNA pseudouridylate synthase 3 148 6.6E-12 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_09460 c604be297bebd2819751866c25d12708 262 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 38 52 - T 23-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDG62_09460 c604be297bebd2819751866c25d12708 262 Gene3D G3DSA:3.30.70.580 1 66 4.4E-18 T 23-10-2018 CDG62_14870 0c208d5ace448811f6674ff1da17b071 410 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 43 410 1.5E-17 T 23-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDG62_14870 0c208d5ace448811f6674ff1da17b071 410 Gene3D G3DSA:2.40.160.60 22 410 7.5E-34 T 23-10-2018 CDG62_14870 0c208d5ace448811f6674ff1da17b071 410 SUPERFAMILY SSF56935 19 410 9.77E-52 T 23-10-2018 CDG62_04405 4a534e2f5bb19ecb4d6a39f4ac651ffc 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 167 1.6E-13 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_04405 4a534e2f5bb19ecb4d6a39f4ac651ffc 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 155 1.6E-13 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_04405 4a534e2f5bb19ecb4d6a39f4ac651ffc 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 125 139 1.6E-13 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_04405 4a534e2f5bb19ecb4d6a39f4ac651ffc 188 SMART SM00421 122 179 6.8E-17 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_04405 4a534e2f5bb19ecb4d6a39f4ac651ffc 188 Gene3D G3DSA:1.10.10.10 113 183 7.7E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_04405 4a534e2f5bb19ecb4d6a39f4ac651ffc 188 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 99 2.4E-13 T 23-10-2018 IPR000014 PAS domain CDG62_04405 4a534e2f5bb19ecb4d6a39f4ac651ffc 188 SMART SM00091 2 69 0.0032 T 23-10-2018 IPR000014 PAS domain CDG62_04405 4a534e2f5bb19ecb4d6a39f4ac651ffc 188 Pfam PF08447 PAS fold 24 98 2.3E-8 T 23-10-2018 IPR013655 PAS fold-3 GO:0005515 CDG62_04405 4a534e2f5bb19ecb4d6a39f4ac651ffc 188 Gene3D G3DSA:3.30.450.20 4 112 5.4E-18 T 23-10-2018 CDG62_04405 4a534e2f5bb19ecb4d6a39f4ac651ffc 188 SUPERFAMILY SSF55785 5 109 5.93E-14 T 23-10-2018 IPR035965 PAS domain superfamily CDG62_04405 4a534e2f5bb19ecb4d6a39f4ac651ffc 188 Pfam PF00196 Bacterial regulatory proteins, luxR family 124 175 9.7E-20 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_04405 4a534e2f5bb19ecb4d6a39f4ac651ffc 188 SUPERFAMILY SSF46894 115 179 1.84E-18 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG62_00305 b5755ceb34adf22eb76903b2aed6fde8 216 Gene3D G3DSA:3.40.50.300 2 215 3.3E-42 T 23-10-2018 CDG62_00305 b5755ceb34adf22eb76903b2aed6fde8 216 SUPERFAMILY SSF52540 1 214 1.38E-32 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00305 b5755ceb34adf22eb76903b2aed6fde8 216 PIRSF PIRSF009320 2 216 6.8E-30 T 23-10-2018 CDG62_00305 b5755ceb34adf22eb76903b2aed6fde8 216 Pfam PF07015 VirC1 protein 4 185 8.0E-11 T 23-10-2018 IPR009744 VirC1 CDG62_17395 fb6e170a1d133dce6265822060b43ee2 136 Gene3D G3DSA:2.170.150.70 8 123 7.3E-19 T 23-10-2018 CDG62_17395 fb6e170a1d133dce6265822060b43ee2 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 117 3.1E-22 T 23-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CDG62_17395 fb6e170a1d133dce6265822060b43ee2 136 SUPERFAMILY SSF51316 6 136 1.99E-47 T 23-10-2018 IPR011057 Mss4-like superfamily CDG62_10080 182ab0357857981712f4c4dfca46282b 643 Gene3D G3DSA:2.30.42.20 457 636 1.5E-51 T 23-10-2018 CDG62_10080 182ab0357857981712f4c4dfca46282b 643 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 221 337 1.3E-34 T 23-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 CDG62_10080 182ab0357857981712f4c4dfca46282b 643 Gene3D G3DSA:3.30.230.10 225 337 5.2E-34 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG62_10080 182ab0357857981712f4c4dfca46282b 643 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 8 639 26.756 T 23-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CDG62_10080 182ab0357857981712f4c4dfca46282b 643 SUPERFAMILY SSF54211 204 338 1.02E-32 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_10080 182ab0357857981712f4c4dfca46282b 643 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 100 106 - T 23-10-2018 IPR014762 DNA mismatch repair, conserved site CDG62_10080 182ab0357857981712f4c4dfca46282b 643 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 143 9.6E-11 T 23-10-2018 CDG62_10080 182ab0357857981712f4c4dfca46282b 643 Pfam PF08676 MutL C terminal dimerisation domain 451 598 1.5E-43 T 23-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CDG62_10080 182ab0357857981712f4c4dfca46282b 643 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 9 318 6.2E-96 T 23-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 CDG62_10080 182ab0357857981712f4c4dfca46282b 643 Gene3D G3DSA:3.30.1370.100 499 594 1.5E-51 T 23-10-2018 CDG62_10080 182ab0357857981712f4c4dfca46282b 643 Gene3D G3DSA:3.30.565.10 9 223 2.7E-64 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_10080 182ab0357857981712f4c4dfca46282b 643 SMART SM00853 455 599 4.0E-44 T 23-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CDG62_10080 182ab0357857981712f4c4dfca46282b 643 SUPERFAMILY SSF118116 450 641 1.57E-55 T 23-10-2018 IPR037198 MutL, C-terminal domain superfamily CDG62_10080 182ab0357857981712f4c4dfca46282b 643 SUPERFAMILY SSF55874 9 209 2.05E-50 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_10080 182ab0357857981712f4c4dfca46282b 643 SMART SM01340 220 338 3.6E-50 T 23-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 CDG62_02110 a2acffe09c0abb52f88e78664d079c9c 555 SUPERFAMILY SSF52540 83 288 1.45E-30 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_02110 a2acffe09c0abb52f88e78664d079c9c 555 Pfam PF00176 SNF2 family N-terminal domain 117 320 4.7E-17 T 23-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CDG62_02110 a2acffe09c0abb52f88e78664d079c9c 555 SUPERFAMILY SSF52540 211 529 8.06E-22 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_02110 a2acffe09c0abb52f88e78664d079c9c 555 Gene3D G3DSA:3.40.50.10810 87 327 6.8E-25 T 23-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily CDG62_02110 a2acffe09c0abb52f88e78664d079c9c 555 Gene3D G3DSA:3.40.50.300 365 524 5.6E-13 T 23-10-2018 CDG62_02110 a2acffe09c0abb52f88e78664d079c9c 555 SMART SM00487 100 282 6.8E-10 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG62_07925 c07b27dae27e04b94f0a9857de800d75 333 Gene3D G3DSA:3.20.20.140 1 333 4.4E-109 T 23-10-2018 CDG62_07925 c07b27dae27e04b94f0a9857de800d75 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 10 328 1.4E-125 T 23-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 CDG62_07925 c07b27dae27e04b94f0a9857de800d75 333 Hamap MF_01962 Adenine deaminase. 6 318 89.193 T 23-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CDG62_07925 c07b27dae27e04b94f0a9857de800d75 333 SUPERFAMILY SSF51556 3 332 4.54E-92 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG62_07925 c07b27dae27e04b94f0a9857de800d75 333 Pfam PF00962 Adenosine/AMP deaminase 10 326 1.2E-79 T 23-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 CDG62_09180 50170e254c252d9872f7669e6af28476 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 1.6E-202 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_09180 50170e254c252d9872f7669e6af28476 429 SMART SM01193 4 134 2.7E-92 T 23-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_09180 50170e254c252d9872f7669e6af28476 429 SMART SM01192 142 427 6.5E-210 T 23-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_09180 50170e254c252d9872f7669e6af28476 429 Hamap MF_00318 Enolase [eno]. 2 415 44.368 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_09180 50170e254c252d9872f7669e6af28476 429 Pfam PF03952 Enolase, N-terminal domain 4 134 2.0E-59 T 23-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_09180 50170e254c252d9872f7669e6af28476 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 425 7.7E-132 T 23-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_09180 50170e254c252d9872f7669e6af28476 429 SUPERFAMILY SSF54826 4 137 3.09E-56 T 23-10-2018 CDG62_09180 50170e254c252d9872f7669e6af28476 429 PIRSF PIRSF001400 1 427 3.4E-191 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_09180 50170e254c252d9872f7669e6af28476 429 Gene3D G3DSA:3.20.20.120 128 429 9.5E-132 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CDG62_09180 50170e254c252d9872f7669e6af28476 429 PRINTS PR00148 Enolase signature 367 384 2.7E-43 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_09180 50170e254c252d9872f7669e6af28476 429 PRINTS PR00148 Enolase signature 164 177 2.7E-43 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_09180 50170e254c252d9872f7669e6af28476 429 PRINTS PR00148 Enolase signature 37 51 2.7E-43 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_09180 50170e254c252d9872f7669e6af28476 429 PRINTS PR00148 Enolase signature 338 352 2.7E-43 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_09180 50170e254c252d9872f7669e6af28476 429 PRINTS PR00148 Enolase signature 107 123 2.7E-43 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_09180 50170e254c252d9872f7669e6af28476 429 PRINTS PR00148 Enolase signature 315 326 2.7E-43 T 23-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_09180 50170e254c252d9872f7669e6af28476 429 SUPERFAMILY SSF51604 143 416 7.64E-125 T 23-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily CDG62_09180 50170e254c252d9872f7669e6af28476 429 Gene3D G3DSA:3.30.390.10 1 127 4.3E-56 T 23-10-2018 IPR029017 Enolase-like, N-terminal CDG62_09180 50170e254c252d9872f7669e6af28476 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 23-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 281 335 - T 23-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 SUPERFAMILY SSF81442 44 560 4.71E-175 T 23-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 4 648 0.0 T 23-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 57 504 6.3E-137 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 Gene3D G3DSA:1.20.210.10 31 566 4.9E-187 T 23-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 98 121 3.2E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 384 402 3.2E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 279 300 3.2E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 199 217 3.2E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 325 340 3.2E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 228 247 3.2E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 125 149 3.2E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 412 431 3.2E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 462 483 3.2E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 48 73 3.2E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 167 179 3.2E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08720 388943b5ca1585df38c6002dc9f23bcd 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 349 370 3.2E-95 T 23-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_13035 227a34429a9c484aba330a895e5ff81a 81 SUPERFAMILY SSF53187 24 80 1.17E-10 T 23-10-2018 CDG62_13035 227a34429a9c484aba330a895e5ff81a 81 Gene3D G3DSA:3.40.630.10 22 81 4.8E-14 T 23-10-2018 CDG62_11195 33d1a847632ca0eff692d9ec034268e9 306 SUPERFAMILY SSF49482 16 290 2.49E-80 T 23-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CDG62_11195 33d1a847632ca0eff692d9ec034268e9 306 Gene3D G3DSA:2.60.130.10 1 306 1.3E-116 T 23-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CDG62_11195 33d1a847632ca0eff692d9ec034268e9 306 Pfam PF00775 Dioxygenase 101 287 1.7E-57 T 23-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CDG62_11195 33d1a847632ca0eff692d9ec034268e9 306 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 133 161 - T 23-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CDG62_11195 33d1a847632ca0eff692d9ec034268e9 306 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 2 287 1.1E-142 T 23-10-2018 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1 CDG62_11195 33d1a847632ca0eff692d9ec034268e9 306 Pfam PF04444 Catechol dioxygenase N terminus 23 92 1.1E-20 T 23-10-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 CDG62_14450 ddee4c7a7defb45c0bb98f378cb836ba 167 SUPERFAMILY SSF141523 7 160 1.83E-22 T 23-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CDG62_14450 ddee4c7a7defb45c0bb98f378cb836ba 167 Pfam PF03734 L,D-transpeptidase catalytic domain 10 160 1.8E-15 T 23-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CDG62_14450 ddee4c7a7defb45c0bb98f378cb836ba 167 Gene3D G3DSA:2.40.440.10 5 167 7.9E-22 T 23-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like CDG62_17400 07e9c2d75a62fba8245939ac917a9868 403 SUPERFAMILY SSF51905 2 394 3.71E-36 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_17400 07e9c2d75a62fba8245939ac917a9868 403 Gene3D G3DSA:2.40.30.10 189 338 5.4E-60 T 23-10-2018 CDG62_17400 07e9c2d75a62fba8245939ac917a9868 403 Gene3D G3DSA:3.50.50.60 5 389 5.4E-60 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_17400 07e9c2d75a62fba8245939ac917a9868 403 Pfam PF03486 HI0933-like protein 4 390 3.7E-85 T 23-10-2018 CDG62_17400 07e9c2d75a62fba8245939ac917a9868 403 PRINTS PR00419 Adrenodoxin reductase family signature 4 26 1.5E-6 T 23-10-2018 CDG62_17400 07e9c2d75a62fba8245939ac917a9868 403 PRINTS PR00419 Adrenodoxin reductase family signature 27 40 1.5E-6 T 23-10-2018 CDG62_17400 07e9c2d75a62fba8245939ac917a9868 403 Gene3D G3DSA:1.10.8.260 268 321 5.4E-60 T 23-10-2018 IPR023166 HI0933-like insert domain superfamily CDG62_17400 07e9c2d75a62fba8245939ac917a9868 403 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 26 396 2.3E-160 T 23-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 CDG62_17400 07e9c2d75a62fba8245939ac917a9868 403 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 5 389 4.3E-78 T 23-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CDG62_17400 07e9c2d75a62fba8245939ac917a9868 403 SUPERFAMILY SSF160996 201 338 1.57E-16 T 23-10-2018 CDG62_15450 85b73dcd05fab9b11635c415e67cd585 297 SUPERFAMILY SSF103481 188 282 6.15E-14 T 23-10-2018 CDG62_15450 85b73dcd05fab9b11635c415e67cd585 297 SUPERFAMILY SSF103481 48 148 7.19E-17 T 23-10-2018 CDG62_15450 85b73dcd05fab9b11635c415e67cd585 297 Pfam PF00892 EamA-like transporter family 15 144 4.7E-17 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_15450 85b73dcd05fab9b11635c415e67cd585 297 Pfam PF00892 EamA-like transporter family 158 281 3.4E-14 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_08245 96894520c0e81cdc4c605f6debc995c6 151 SUPERFAMILY SSF53254 1 121 9.01E-22 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG62_08245 96894520c0e81cdc4c605f6debc995c6 151 SMART SM00855 2 111 1.9E-10 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG62_08245 96894520c0e81cdc4c605f6debc995c6 151 PIRSF PIRSF000709 1 79 0.0064 T 23-10-2018 CDG62_08245 96894520c0e81cdc4c605f6debc995c6 151 Gene3D G3DSA:3.40.50.1240 1 147 1.7E-31 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG62_08245 96894520c0e81cdc4c605f6debc995c6 151 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 74 1.1E-13 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG62_07205 d17863ef4d9221ddca27fd0f7c285daf 210 Gene3D G3DSA:1.10.357.10 1 210 9.9E-64 T 23-10-2018 CDG62_07205 d17863ef4d9221ddca27fd0f7c285daf 210 Pfam PF16925 Bacterial transcriptional repressor C-terminal 112 203 8.1E-14 T 23-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDG62_07205 d17863ef4d9221ddca27fd0f7c285daf 210 SUPERFAMILY SSF46689 2 74 3.39E-14 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_07205 d17863ef4d9221ddca27fd0f7c285daf 210 SUPERFAMILY SSF48498 102 206 1.72E-22 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG62_07205 d17863ef4d9221ddca27fd0f7c285daf 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 55 4.6E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_13385 ddd23d146fa82084548efaed80c01eff 145 Gene3D G3DSA:2.40.128.520 16 145 2.1E-16 T 23-10-2018 CDG62_13385 ddd23d146fa82084548efaed80c01eff 145 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 20 142 4.3E-24 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG62_16535 c85fd2b655744adbcccc01bfd1e5a5a0 484 Gene3D G3DSA:3.40.50.1220 302 480 1.5E-81 T 23-10-2018 CDG62_16535 c85fd2b655744adbcccc01bfd1e5a5a0 484 Pfam PF02233 NAD(P) transhydrogenase beta subunit 10 477 9.3E-183 T 23-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CDG62_16535 c85fd2b655744adbcccc01bfd1e5a5a0 484 PIRSF PIRSF000204 4 481 1.0E-190 T 23-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 CDG62_16535 c85fd2b655744adbcccc01bfd1e5a5a0 484 SUPERFAMILY SSF52467 308 480 1.64E-73 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDG62_11450 f0eeb9f4c4fe23350c8466990e25f284 247 Pfam PF00106 short chain dehydrogenase 3 193 2.6E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11450 f0eeb9f4c4fe23350c8466990e25f284 247 SUPERFAMILY SSF51735 3 217 7.19E-56 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_11450 f0eeb9f4c4fe23350c8466990e25f284 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.1E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11450 f0eeb9f4c4fe23350c8466990e25f284 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11450 f0eeb9f4c4fe23350c8466990e25f284 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.1E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11450 f0eeb9f4c4fe23350c8466990e25f284 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.1E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11450 f0eeb9f4c4fe23350c8466990e25f284 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.1E-21 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11450 f0eeb9f4c4fe23350c8466990e25f284 247 Gene3D G3DSA:3.40.50.720 2 223 6.6E-55 T 23-10-2018 CDG62_11450 f0eeb9f4c4fe23350c8466990e25f284 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.5E-5 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11450 f0eeb9f4c4fe23350c8466990e25f284 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.5E-5 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11450 f0eeb9f4c4fe23350c8466990e25f284 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.5E-5 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_05265 6c4cc1ef9b041bc0924ad92b69419de4 202 Pfam PF11185 Protein of unknown function (DUF2971) 1 93 3.1E-10 T 23-10-2018 IPR021352 Protein of unknown function DUF2971 CDG62_06885 6ecb87477e418f5c73d5a5e003a53fb8 541 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 4 539 28.479 T 23-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CDG62_06885 6ecb87477e418f5c73d5a5e003a53fb8 541 Pfam PF02540 NAD synthase 264 513 2.6E-72 T 23-10-2018 IPR022310 NAD/GMP synthase CDG62_06885 6ecb87477e418f5c73d5a5e003a53fb8 541 SUPERFAMILY SSF52402 258 523 2.33E-77 T 23-10-2018 CDG62_06885 6ecb87477e418f5c73d5a5e003a53fb8 541 SUPERFAMILY SSF56317 1 260 4.84E-62 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDG62_06885 6ecb87477e418f5c73d5a5e003a53fb8 541 TIGRFAM TIGR00552 nadE: NAD+ synthetase 262 513 1.4E-59 T 23-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CDG62_06885 6ecb87477e418f5c73d5a5e003a53fb8 541 PIRSF PIRSF006630 1 540 1.8E-203 T 23-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CDG62_06885 6ecb87477e418f5c73d5a5e003a53fb8 541 Pfam PF00795 Carbon-nitrogen hydrolase 5 241 3.8E-28 T 23-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 CDG62_06885 6ecb87477e418f5c73d5a5e003a53fb8 541 Gene3D G3DSA:3.60.110.10 1 259 2.3E-102 T 23-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily CDG62_06885 6ecb87477e418f5c73d5a5e003a53fb8 541 Gene3D G3DSA:3.40.50.620 261 541 9.9E-111 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_05180 b45637740414281a4c6063c3c53eb40d 84 Gene3D G3DSA:3.40.30.10 1 84 2.3E-30 T 23-10-2018 CDG62_05180 b45637740414281a4c6063c3c53eb40d 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 7.1E-33 T 23-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 CDG62_05180 b45637740414281a4c6063c3c53eb40d 84 Pfam PF00462 Glutaredoxin 4 64 7.8E-23 T 23-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CDG62_05180 b45637740414281a4c6063c3c53eb40d 84 PRINTS PR00160 Glutaredoxin signature 47 60 4.6E-14 T 23-10-2018 IPR014025 Glutaredoxin subgroup CDG62_05180 b45637740414281a4c6063c3c53eb40d 84 PRINTS PR00160 Glutaredoxin signature 4 22 4.6E-14 T 23-10-2018 IPR014025 Glutaredoxin subgroup CDG62_05180 b45637740414281a4c6063c3c53eb40d 84 PRINTS PR00160 Glutaredoxin signature 61 74 4.6E-14 T 23-10-2018 IPR014025 Glutaredoxin subgroup CDG62_05180 b45637740414281a4c6063c3c53eb40d 84 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 23-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CDG62_05180 b45637740414281a4c6063c3c53eb40d 84 SUPERFAMILY SSF52833 1 83 2.23E-29 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_03535 14d7908d213d5fcd97b420d47e034cd1 309 Gene3D G3DSA:3.40.50.20 1 87 5.3E-33 T 23-10-2018 CDG62_03535 14d7908d213d5fcd97b420d47e034cd1 309 SUPERFAMILY SSF52440 9 99 2.59E-26 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG62_03535 14d7908d213d5fcd97b420d47e034cd1 309 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 66 77 - T 23-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_03535 14d7908d213d5fcd97b420d47e034cd1 309 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 246 274 - T 23-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_03535 14d7908d213d5fcd97b420d47e034cd1 309 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 9 303 1.6E-99 T 23-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_03535 14d7908d213d5fcd97b420d47e034cd1 309 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 8 304 34.015 T 23-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_03535 14d7908d213d5fcd97b420d47e034cd1 309 Gene3D G3DSA:3.30.470.20 89 289 9.8E-81 T 23-10-2018 CDG62_03535 14d7908d213d5fcd97b420d47e034cd1 309 Pfam PF07478 D-ala D-ala ligase C-terminus 106 301 1.8E-54 T 23-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_03535 14d7908d213d5fcd97b420d47e034cd1 309 PIRSF PIRSF039102 5 51 1.1E-7 T 23-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_03535 14d7908d213d5fcd97b420d47e034cd1 309 PIRSF PIRSF039102 41 309 1.1E-80 T 23-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_03535 14d7908d213d5fcd97b420d47e034cd1 309 Pfam PF01820 D-ala D-ala ligase N-terminus 9 88 2.1E-16 T 23-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_03535 14d7908d213d5fcd97b420d47e034cd1 309 SUPERFAMILY SSF56059 99 303 2.83E-54 T 23-10-2018 CDG62_15910 0611397be7fbe22195acd16d9fa6a740 243 SUPERFAMILY SSF55729 3 226 1.54E-78 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_15910 0611397be7fbe22195acd16d9fa6a740 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 34 202 7.0E-61 T 23-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CDG62_15910 0611397be7fbe22195acd16d9fa6a740 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 216 1.1E-51 T 23-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CDG62_15910 0611397be7fbe22195acd16d9fa6a740 243 Gene3D G3DSA:2.30.210.20 1 59 9.0E-21 T 23-10-2018 CDG62_15910 0611397be7fbe22195acd16d9fa6a740 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 77.411 T 23-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CDG62_15910 0611397be7fbe22195acd16d9fa6a740 243 Gene3D G3DSA:3.40.630.70 60 238 2.0E-55 T 23-10-2018 CDG62_04290 39c930117f4f7df2ade229407e84f30c 316 Pfam PF02401 LytB protein 3 283 2.6E-95 T 23-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CDG62_04290 39c930117f4f7df2ade229407e84f30c 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 38.493 T 23-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CDG62_04290 39c930117f4f7df2ade229407e84f30c 316 Gene3D G3DSA:3.40.1010.20 6 283 1.4E-113 T 23-10-2018 CDG62_04290 39c930117f4f7df2ade229407e84f30c 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 6.0E-102 T 23-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CDG62_04290 39c930117f4f7df2ade229407e84f30c 316 Gene3D G3DSA:3.40.50.11270 12 96 1.4E-113 T 23-10-2018 CDG62_04290 39c930117f4f7df2ade229407e84f30c 316 Gene3D G3DSA:3.40.1010.20 97 197 1.4E-113 T 23-10-2018 CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 204 225 - T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 189 213 8.4E-39 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 214 238 8.4E-39 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 75 102 8.4E-39 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 254 271 8.4E-39 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 25 42 8.4E-39 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 149 169 8.4E-39 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 Gene3D G3DSA:3.40.50.720 10 203 1.6E-60 T 23-10-2018 CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 SUPERFAMILY SSF48179 195 347 3.61E-51 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 PIRSF PIRSF000114 16 348 4.7E-106 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 21 338 33.572 T 23-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 Gene3D G3DSA:1.10.1040.10 205 351 3.4E-47 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 SUPERFAMILY SSF51735 22 193 3.38E-49 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 23 173 3.1E-48 T 23-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG62_08240 ee3d21175ed165d20ee1bad04a611352 357 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 196 334 1.2E-47 T 23-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 Gene3D G3DSA:1.10.287.110 1 112 3.3E-39 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 350 4.4E-141 T 23-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 SUPERFAMILY SSF49493 115 262 4.84E-19 T 23-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 SMART SM00271 4 62 1.9E-34 T 23-10-2018 IPR001623 DnaJ domain CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 SUPERFAMILY SSF46565 1 109 2.22E-37 T 23-10-2018 IPR036869 Chaperone J-domain superfamily CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 Gene3D G3DSA:2.10.230.10 149 212 9.0E-21 T 23-10-2018 CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 PRINTS PR00625 DnaJ domain signature 62 81 4.4E-34 T 23-10-2018 IPR001623 DnaJ domain CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 PRINTS PR00625 DnaJ domain signature 25 40 4.4E-34 T 23-10-2018 IPR001623 DnaJ domain CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 PRINTS PR00625 DnaJ domain signature 7 25 4.4E-34 T 23-10-2018 IPR001623 DnaJ domain CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 PRINTS PR00625 DnaJ domain signature 42 62 4.4E-34 T 23-10-2018 IPR001623 DnaJ domain CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 Gene3D G3DSA:2.60.260.20 257 366 2.9E-29 T 23-10-2018 CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 41.48 T 23-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 SUPERFAMILY SSF57938 136 211 8.24E-22 T 23-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 23-10-2018 IPR018253 DnaJ domain, conserved site CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 Pfam PF00684 DnaJ central domain 149 209 2.5E-14 T 23-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 Pfam PF00226 DnaJ domain 5 67 6.5E-30 T 23-10-2018 IPR001623 DnaJ domain CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 SUPERFAMILY SSF49493 260 345 7.98E-22 T 23-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CDG62_03135 7bcbb9d7f29ccbe68a820626014eb024 372 Pfam PF01556 DnaJ C terminal domain 123 334 4.1E-42 T 23-10-2018 IPR002939 Chaperone DnaJ, C-terminal CDG62_10730 d1086d23dd65b32f1e2016b16b9bf74e 102 SUPERFAMILY SSF160191 1 86 9.29E-26 T 23-10-2018 IPR038068 YcgL-like superfamily CDG62_10730 d1086d23dd65b32f1e2016b16b9bf74e 102 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 86 9.0E-29 T 23-10-2018 IPR027354 YcgL domain CDG62_10730 d1086d23dd65b32f1e2016b16b9bf74e 102 Gene3D G3DSA:3.10.510.20 1 84 1.4E-28 T 23-10-2018 IPR038068 YcgL-like superfamily CDG62_10730 d1086d23dd65b32f1e2016b16b9bf74e 102 Pfam PF05166 YcgL domain 3 85 2.2E-26 T 23-10-2018 IPR027354 YcgL domain CDG62_10730 d1086d23dd65b32f1e2016b16b9bf74e 102 Hamap MF_01866 Protein YcgL [ycgL]. 1 96 21.795 T 23-10-2018 IPR027354 YcgL domain CDG62_09845 c18c94c3753455ac582fdfb69bca2c2b 275 PIRSF PIRSF016184 1 274 1.5E-53 T 23-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CDG62_09845 c18c94c3753455ac582fdfb69bca2c2b 275 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 231 1.0E-36 T 23-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CDG62_09845 c18c94c3753455ac582fdfb69bca2c2b 275 Pfam PF02567 Phenazine biosynthesis-like protein 6 268 1.1E-53 T 23-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CDG62_09845 c18c94c3753455ac582fdfb69bca2c2b 275 Gene3D G3DSA:3.10.310.10 117 262 5.5E-81 T 23-10-2018 CDG62_09845 c18c94c3753455ac582fdfb69bca2c2b 275 SUPERFAMILY SSF54506 2 274 7.5E-66 T 23-10-2018 CDG62_09845 c18c94c3753455ac582fdfb69bca2c2b 275 Gene3D G3DSA:3.10.310.10 4 269 5.5E-81 T 23-10-2018 CDG62_15970 aa576f608c1c490b6b1f5295ee490e27 409 Gene3D G3DSA:3.40.47.10 1 252 1.1E-58 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_15970 aa576f608c1c490b6b1f5295ee490e27 409 SUPERFAMILY SSF53901 2 251 3.17E-58 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_15970 aa576f608c1c490b6b1f5295ee490e27 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 364 3.0E-30 T 23-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CDG62_15970 aa576f608c1c490b6b1f5295ee490e27 409 SUPERFAMILY SSF53901 213 407 3.17E-62 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_15970 aa576f608c1c490b6b1f5295ee490e27 409 Gene3D G3DSA:3.40.47.10 258 408 8.9E-44 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_15970 aa576f608c1c490b6b1f5295ee490e27 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 3.0E-40 T 23-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CDG62_15970 aa576f608c1c490b6b1f5295ee490e27 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 23-10-2018 IPR018201 Beta-ketoacyl synthase, active site CDG62_15970 aa576f608c1c490b6b1f5295ee490e27 409 SMART SM00825 Beta-ketoacyl synthase 4 409 2.0E-13 T 23-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDG62_04830 5ad5478c4e979aaa71fb41fadb6ca134 496 Gene3D G3DSA:3.50.50.60 156 244 4.5E-12 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_04830 5ad5478c4e979aaa71fb41fadb6ca134 496 SUPERFAMILY SSF51905 1 388 2.49E-46 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_04830 5ad5478c4e979aaa71fb41fadb6ca134 496 Gene3D G3DSA:3.50.50.60 1 155 2.3E-36 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_04830 5ad5478c4e979aaa71fb41fadb6ca134 496 Gene3D G3DSA:3.50.50.60 300 479 3.3E-11 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_04830 5ad5478c4e979aaa71fb41fadb6ca134 496 Pfam PF00743 Flavin-binding monooxygenase-like 8 388 2.0E-15 T 23-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 CDG62_15350 c376ad5fc1970f6569b20c8f32ac3ccd 789 Gene3D G3DSA:2.60.40.2610 614 705 8.9E-14 T 23-10-2018 CDG62_15350 c376ad5fc1970f6569b20c8f32ac3ccd 789 Gene3D G3DSA:2.60.40.3110 239 328 2.5E-6 T 23-10-2018 CDG62_15350 c376ad5fc1970f6569b20c8f32ac3ccd 789 Pfam PF00577 Outer membrane usher protein 187 696 5.6E-36 T 23-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CDG62_16615 860a49f37317f977ea6204786bdeea51 593 Gene3D G3DSA:3.40.50.300 414 592 2.5E-21 T 23-10-2018 CDG62_16615 860a49f37317f977ea6204786bdeea51 593 Gene3D G3DSA:1.10.10.160 119 193 2.3E-57 T 23-10-2018 IPR013986 DExx box DNA helicase domain superfamily CDG62_16615 860a49f37317f977ea6204786bdeea51 593 Gene3D G3DSA:3.40.50.300 286 383 4.6E-10 T 23-10-2018 CDG62_16615 860a49f37317f977ea6204786bdeea51 593 Pfam PF13361 UvrD-like helicase C-terminal domain 282 388 2.2E-8 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDG62_16615 860a49f37317f977ea6204786bdeea51 593 Gene3D G3DSA:3.40.50.300 17 274 2.3E-57 T 23-10-2018 CDG62_16615 860a49f37317f977ea6204786bdeea51 593 Pfam PF00580 UvrD/REP helicase N-terminal domain 153 274 1.2E-27 T 23-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CDG62_16615 860a49f37317f977ea6204786bdeea51 593 SUPERFAMILY SSF52540 17 578 1.68E-89 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_16615 860a49f37317f977ea6204786bdeea51 593 Pfam PF13361 UvrD-like helicase C-terminal domain 484 575 5.9E-18 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDG62_10045 053e67532ec4dafe590c89ff6821b206 406 Gene3D G3DSA:1.20.1250.20 12 195 3.7E-28 T 23-10-2018 CDG62_10045 053e67532ec4dafe590c89ff6821b206 406 Pfam PF07690 Major Facilitator Superfamily 21 233 2.7E-25 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_10045 053e67532ec4dafe590c89ff6821b206 406 SUPERFAMILY SSF103473 4 389 3.14E-62 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_10045 053e67532ec4dafe590c89ff6821b206 406 Gene3D G3DSA:1.20.1250.20 207 400 1.2E-20 T 23-10-2018 CDG62_00895 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Gene3D G3DSA:3.20.20.70 2 212 9.6E-64 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_00895 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 SUPERFAMILY SSF51366 4 209 3.92E-56 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG62_00895 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 205 2.3E-44 T 23-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CDG62_00895 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 212 37.199 T 23-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CDG62_12440 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Gene3D G3DSA:3.20.20.70 2 212 9.6E-64 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_12440 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 SUPERFAMILY SSF51366 4 209 3.92E-56 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG62_12440 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 205 2.3E-44 T 23-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CDG62_12440 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 212 37.199 T 23-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CDG62_04710 513dc5faa00d5c51c88b7d7a269c3839 274 Gene3D G3DSA:2.30.30.30 118 196 9.4E-31 T 23-10-2018 IPR014722 Ribosomal protein L2, domain 2 CDG62_04710 513dc5faa00d5c51c88b7d7a269c3839 274 SMART SM01383 42 118 2.3E-46 T 23-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04710 513dc5faa00d5c51c88b7d7a269c3839 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 1.5E-125 T 23-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CDG62_04710 513dc5faa00d5c51c88b7d7a269c3839 274 Gene3D G3DSA:4.10.950.10 197 273 6.1E-34 T 23-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04710 513dc5faa00d5c51c88b7d7a269c3839 274 PIRSF PIRSF002158 10 274 1.7E-102 T 23-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04710 513dc5faa00d5c51c88b7d7a269c3839 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 5.9E-34 T 23-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04710 513dc5faa00d5c51c88b7d7a269c3839 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 249 9.4E-54 T 23-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CDG62_04710 513dc5faa00d5c51c88b7d7a269c3839 274 Gene3D G3DSA:2.40.50.140 1 114 5.6E-49 T 23-10-2018 CDG62_04710 513dc5faa00d5c51c88b7d7a269c3839 274 SUPERFAMILY SSF50104 126 269 4.27E-57 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily CDG62_04710 513dc5faa00d5c51c88b7d7a269c3839 274 SMART SM01382 124 251 7.4E-85 T 23-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CDG62_04710 513dc5faa00d5c51c88b7d7a269c3839 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 45.468 T 23-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CDG62_04710 513dc5faa00d5c51c88b7d7a269c3839 274 SUPERFAMILY SSF50249 3 124 1.58E-49 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_05295 cd63742fdcfcafc5f93d9907a953822a 183 Pfam PF01569 PAP2 superfamily 66 175 1.8E-20 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG62_05295 cd63742fdcfcafc5f93d9907a953822a 183 Gene3D G3DSA:1.20.144.10 93 180 5.8E-17 T 23-10-2018 CDG62_05295 cd63742fdcfcafc5f93d9907a953822a 183 SMART SM00014 63 173 4.6E-16 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG62_05295 cd63742fdcfcafc5f93d9907a953822a 183 SUPERFAMILY SSF48317 8 170 9.29E-36 T 23-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDG62_15835 d097505638732bf4eae260941f7c16c0 282 Gene3D G3DSA:3.60.20.10 1 259 1.7E-94 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG62_15835 d097505638732bf4eae260941f7c16c0 282 Pfam PF13230 Glutamine amidotransferases class-II 1 263 1.6E-119 T 23-10-2018 IPR026869 Putative glutamine amidotransferase type 2 CDG62_15835 d097505638732bf4eae260941f7c16c0 282 SUPERFAMILY SSF56235 2 252 4.34E-45 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG62_07585 431f3cb13301c5de3bed2a52f31bd6f5 405 Gene3D G3DSA:3.40.980.10 176 330 7.6E-104 T 23-10-2018 IPR036425 MoaB/Mog-like domain superfamily CDG62_07585 431f3cb13301c5de3bed2a52f31bd6f5 405 SMART SM00852 181 321 1.1E-30 T 23-10-2018 IPR001453 MoaB/Mog domain CDG62_07585 431f3cb13301c5de3bed2a52f31bd6f5 405 Pfam PF03454 MoeA C-terminal region (domain IV) 334 390 1.6E-8 T 23-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDG62_07585 431f3cb13301c5de3bed2a52f31bd6f5 405 Gene3D G3DSA:3.90.105.10 28 175 7.6E-104 T 23-10-2018 CDG62_07585 431f3cb13301c5de3bed2a52f31bd6f5 405 Pfam PF03453 MoeA N-terminal region (domain I and II) 10 168 4.7E-30 T 23-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDG62_07585 431f3cb13301c5de3bed2a52f31bd6f5 405 SUPERFAMILY SSF63882 7 176 1.05E-40 T 23-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDG62_07585 431f3cb13301c5de3bed2a52f31bd6f5 405 Pfam PF00994 Probable molybdopterin binding domain 181 317 3.8E-27 T 23-10-2018 IPR001453 MoaB/Mog domain CDG62_07585 431f3cb13301c5de3bed2a52f31bd6f5 405 Gene3D G3DSA:2.40.340.10 331 391 7.6E-104 T 23-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDG62_07585 431f3cb13301c5de3bed2a52f31bd6f5 405 Gene3D G3DSA:2.170.190.11 50 142 7.6E-104 T 23-10-2018 CDG62_07585 431f3cb13301c5de3bed2a52f31bd6f5 405 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 178 313 3.9E-27 T 23-10-2018 IPR001453 MoaB/Mog domain CDG62_07585 431f3cb13301c5de3bed2a52f31bd6f5 405 SUPERFAMILY SSF63867 332 393 1.24E-8 T 23-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDG62_07585 431f3cb13301c5de3bed2a52f31bd6f5 405 SUPERFAMILY SSF53218 178 325 7.33E-33 T 23-10-2018 IPR036425 MoaB/Mog-like domain superfamily CDG62_10395 eeeb7b3638069e28a79abaf322093bef 416 SUPERFAMILY SSF56601 20 386 6.37E-66 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG62_10395 eeeb7b3638069e28a79abaf322093bef 416 Pfam PF00144 Beta-lactamase 35 391 1.7E-49 T 23-10-2018 IPR001466 Beta-lactamase-related CDG62_10395 eeeb7b3638069e28a79abaf322093bef 416 Gene3D G3DSA:3.40.710.30 15 405 2.9E-95 T 23-10-2018 CDG62_00810 13229dee41afa1ac5128bbd1852f0fcb 375 SUPERFAMILY SSF52540 1 316 7.53E-26 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00810 13229dee41afa1ac5128bbd1852f0fcb 375 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 310 2.1E-21 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG62_00810 13229dee41afa1ac5128bbd1852f0fcb 375 Gene3D G3DSA:3.40.50.300 1 333 2.4E-29 T 23-10-2018 CDG62_00810 13229dee41afa1ac5128bbd1852f0fcb 375 PIRSF PIRSF029347 66 346 1.4E-6 T 23-10-2018 IPR014555 RecF-like CDG62_00810 13229dee41afa1ac5128bbd1852f0fcb 375 PIRSF PIRSF029347 1 151 8.7E-10 T 23-10-2018 IPR014555 RecF-like CDG62_11015 6d10246b45e355e9ee2104eac290d4a1 897 SUPERFAMILY SSF52540 39 281 6.36E-11 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_11015 6d10246b45e355e9ee2104eac290d4a1 897 SUPERFAMILY SSF48452 530 781 7.94E-7 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_11015 6d10246b45e355e9ee2104eac290d4a1 897 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 851 867 1.5E-9 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_11015 6d10246b45e355e9ee2104eac290d4a1 897 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 867 879 1.5E-9 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_11015 6d10246b45e355e9ee2104eac290d4a1 897 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 837 851 1.5E-9 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_11015 6d10246b45e355e9ee2104eac290d4a1 897 Pfam PF00196 Bacterial regulatory proteins, luxR family 836 889 1.5E-14 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_11015 6d10246b45e355e9ee2104eac290d4a1 897 Gene3D G3DSA:1.25.40.10 465 802 7.0E-28 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_11015 6d10246b45e355e9ee2104eac290d4a1 897 Gene3D G3DSA:1.10.10.10 826 897 3.6E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_11015 6d10246b45e355e9ee2104eac290d4a1 897 SUPERFAMILY SSF46894 825 897 5.78E-16 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG62_11015 6d10246b45e355e9ee2104eac290d4a1 897 Gene3D G3DSA:3.40.50.300 27 178 1.4E-8 T 23-10-2018 CDG62_11015 6d10246b45e355e9ee2104eac290d4a1 897 SMART SM00421 834 891 1.9E-17 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_11015 6d10246b45e355e9ee2104eac290d4a1 897 Pfam PF13191 AAA ATPase domain 39 161 7.0E-8 T 23-10-2018 CDG62_08075 78489725cd771b6e48a7cfa839ea7914 485 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 448 468 4.8E-6 T 23-10-2018 CDG62_08075 78489725cd771b6e48a7cfa839ea7914 485 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 410 427 4.8E-6 T 23-10-2018 CDG62_08075 78489725cd771b6e48a7cfa839ea7914 485 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 428 447 4.8E-6 T 23-10-2018 CDG62_08075 78489725cd771b6e48a7cfa839ea7914 485 PRINTS PR01021 OMPA domain signature 365 387 6.1E-9 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_08075 78489725cd771b6e48a7cfa839ea7914 485 PRINTS PR01021 OMPA domain signature 395 410 6.1E-9 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_08075 78489725cd771b6e48a7cfa839ea7914 485 PRINTS PR01021 OMPA domain signature 410 426 6.1E-9 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_08075 78489725cd771b6e48a7cfa839ea7914 485 Pfam PF00691 OmpA family 364 459 1.0E-22 T 23-10-2018 IPR006665 OmpA-like domain CDG62_08075 78489725cd771b6e48a7cfa839ea7914 485 Gene3D G3DSA:3.30.1330.60 329 472 2.2E-38 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG62_08075 78489725cd771b6e48a7cfa839ea7914 485 SUPERFAMILY SSF103088 349 464 2.35E-33 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG62_15735 7b78a6dd9d8f41da18f37bad3ea0a21f 494 Hamap MF_00186 Glycerol kinase [glpK]. 1 494 52.865 T 23-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CDG62_15735 7b78a6dd9d8f41da18f37bad3ea0a21f 494 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 133 145 - T 23-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CDG62_15735 7b78a6dd9d8f41da18f37bad3ea0a21f 494 PIRSF PIRSF000538 1 493 6.8E-170 T 23-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CDG62_15735 7b78a6dd9d8f41da18f37bad3ea0a21f 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 446 1.5E-63 T 23-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CDG62_15735 7b78a6dd9d8f41da18f37bad3ea0a21f 494 SUPERFAMILY SSF53067 3 252 1.56E-90 T 23-10-2018 CDG62_15735 7b78a6dd9d8f41da18f37bad3ea0a21f 494 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 23-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CDG62_15735 7b78a6dd9d8f41da18f37bad3ea0a21f 494 SUPERFAMILY SSF53067 252 492 7.13E-82 T 23-10-2018 CDG62_15735 7b78a6dd9d8f41da18f37bad3ea0a21f 494 Gene3D G3DSA:3.30.420.40 251 493 3.4E-87 T 23-10-2018 CDG62_15735 7b78a6dd9d8f41da18f37bad3ea0a21f 494 Gene3D G3DSA:3.30.420.40 1 250 3.6E-101 T 23-10-2018 CDG62_15735 7b78a6dd9d8f41da18f37bad3ea0a21f 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 1.2E-78 T 23-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CDG62_15735 7b78a6dd9d8f41da18f37bad3ea0a21f 494 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 491 8.4E-214 T 23-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CDG62_10655 9505d40402ae2adb39d49d8144b7c603 289 Pfam PF10977 Protein of unknown function (DUF2797) 47 285 1.1E-94 T 23-10-2018 IPR021246 Protein of unknown function DUF2797 CDG62_12115 7eb06fdb42f2017dcc701956a46703b5 231 Gene3D G3DSA:1.10.357.10 78 230 2.3E-26 T 23-10-2018 CDG62_12115 7eb06fdb42f2017dcc701956a46703b5 231 Gene3D G3DSA:1.10.10.60 26 77 9.9E-17 T 23-10-2018 CDG62_12115 7eb06fdb42f2017dcc701956a46703b5 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 42 87 5.4E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_12115 7eb06fdb42f2017dcc701956a46703b5 231 SUPERFAMILY SSF46689 27 101 1.57E-12 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_07300 cc9f36b8bb82024fc507973397ea3ead 268 Pfam PF00218 Indole-3-glycerol phosphate synthase 9 261 8.6E-96 T 23-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CDG62_07300 cc9f36b8bb82024fc507973397ea3ead 268 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 7 263 34.711 T 23-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CDG62_07300 cc9f36b8bb82024fc507973397ea3ead 268 SUPERFAMILY SSF51366 16 263 1.77E-85 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG62_07300 cc9f36b8bb82024fc507973397ea3ead 268 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 23-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CDG62_07300 cc9f36b8bb82024fc507973397ea3ead 268 Gene3D G3DSA:3.20.20.70 2 267 2.8E-95 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_03090 e6e49d218a500953794fa4f27794c9a2 700 Pfam PF00593 TonB dependent receptor 243 699 8.8E-55 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_03090 e6e49d218a500953794fa4f27794c9a2 700 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 166 2.5E-18 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_03090 e6e49d218a500953794fa4f27794c9a2 700 Gene3D G3DSA:2.170.130.10 47 177 2.2E-30 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_03090 e6e49d218a500953794fa4f27794c9a2 700 Gene3D G3DSA:2.40.170.20 178 700 2.5E-115 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_03090 e6e49d218a500953794fa4f27794c9a2 700 SUPERFAMILY SSF56935 61 700 4.71E-122 T 23-10-2018 CDG62_03090 e6e49d218a500953794fa4f27794c9a2 700 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 699 7.5E-93 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDG62_11120 738bba0ef993f66ec6a29f9312ad7f54 413 Gene3D G3DSA:3.20.20.70 1 371 8.5E-112 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_11120 738bba0ef993f66ec6a29f9312ad7f54 413 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 340 7.7E-56 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDG62_11120 738bba0ef993f66ec6a29f9312ad7f54 413 SUPERFAMILY SSF51395 3 343 2.68E-100 T 23-10-2018 CDG62_18195 7bb2a6b976ab455e313b90187477be3f 515 SUPERFAMILY SSF53649 11 511 1.31E-68 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG62_18195 7bb2a6b976ab455e313b90187477be3f 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 9 512 48.268 T 23-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_18195 7bb2a6b976ab455e313b90187477be3f 515 Gene3D G3DSA:3.40.720.10 10 509 1.1E-203 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG62_18195 7bb2a6b976ab455e313b90187477be3f 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 87 299 4.4E-74 T 23-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_18195 7bb2a6b976ab455e313b90187477be3f 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 11 511 1.3E-216 T 23-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_18195 7bb2a6b976ab455e313b90187477be3f 515 Pfam PF01676 Metalloenzyme superfamily 11 499 1.0E-74 T 23-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CDG62_18195 7bb2a6b976ab455e313b90187477be3f 515 SUPERFAMILY SSF64158 82 310 5.1E-79 T 23-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_18195 7bb2a6b976ab455e313b90187477be3f 515 Gene3D G3DSA:3.40.1450.10 82 312 1.1E-203 T 23-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_18195 7bb2a6b976ab455e313b90187477be3f 515 PIRSF PIRSF001492 4 514 8.6E-193 T 23-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CDG62_05315 28f215d89b784ff3e9ce8230bf15dd65 266 Pfam PF13432 Tetratricopeptide repeat 149 204 2.3E-4 T 23-10-2018 CDG62_05315 28f215d89b784ff3e9ce8230bf15dd65 266 Pfam PF13432 Tetratricopeptide repeat 42 86 6.6E-4 T 23-10-2018 CDG62_05315 28f215d89b784ff3e9ce8230bf15dd65 266 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 18 246 3.5E-63 T 23-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW CDG62_05315 28f215d89b784ff3e9ce8230bf15dd65 266 Gene3D G3DSA:1.25.40.10 34 257 4.7E-41 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_05315 28f215d89b784ff3e9ce8230bf15dd65 266 Pfam PF14559 Tetratricopeptide repeat 88 147 5.6E-6 T 23-10-2018 CDG62_05315 28f215d89b784ff3e9ce8230bf15dd65 266 SMART SM00028 144 177 0.0081 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG62_05315 28f215d89b784ff3e9ce8230bf15dd65 266 SMART SM00028 37 70 0.096 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG62_05315 28f215d89b784ff3e9ce8230bf15dd65 266 SMART SM00028 71 107 86.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG62_05315 28f215d89b784ff3e9ce8230bf15dd65 266 SUPERFAMILY SSF81901 42 205 1.99E-20 T 23-10-2018 CDG62_19030 1da46e17cd427e1d68e90a4b188acfbc 331 Gene3D G3DSA:1.10.8.450 253 287 3.7E-101 T 23-10-2018 CDG62_19030 1da46e17cd427e1d68e90a4b188acfbc 331 SUPERFAMILY SSF53850 41 270 2.45E-44 T 23-10-2018 CDG62_19030 1da46e17cd427e1d68e90a4b188acfbc 331 Pfam PF09084 NMT1/THI5 like 55 262 5.4E-14 T 23-10-2018 IPR015168 SsuA/THI5-like CDG62_19030 1da46e17cd427e1d68e90a4b188acfbc 331 Gene3D G3DSA:3.40.190.10 44 318 3.7E-101 T 23-10-2018 CDG62_19030 1da46e17cd427e1d68e90a4b188acfbc 331 SMART SM00062 43 258 3.5E-20 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG62_19030 1da46e17cd427e1d68e90a4b188acfbc 331 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 45 328 1.1E-76 T 23-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 CDG62_19030 1da46e17cd427e1d68e90a4b188acfbc 331 Gene3D G3DSA:3.40.190.10 122 221 3.7E-101 T 23-10-2018 CDG62_13700 8e9350252c3c7d5860af4c72dbd3e53a 402 Pfam PF01494 FAD binding domain 4 357 9.7E-40 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 CDG62_13700 8e9350252c3c7d5860af4c72dbd3e53a 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 5.1E-20 T 23-10-2018 CDG62_13700 8e9350252c3c7d5860af4c72dbd3e53a 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 163 178 5.1E-20 T 23-10-2018 CDG62_13700 8e9350252c3c7d5860af4c72dbd3e53a 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 5.1E-20 T 23-10-2018 CDG62_13700 8e9350252c3c7d5860af4c72dbd3e53a 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 5.1E-20 T 23-10-2018 CDG62_13700 8e9350252c3c7d5860af4c72dbd3e53a 402 SUPERFAMILY SSF51905 4 392 2.07E-57 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_13700 8e9350252c3c7d5860af4c72dbd3e53a 402 Gene3D G3DSA:3.50.50.60 5 347 5.9E-98 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_13700 8e9350252c3c7d5860af4c72dbd3e53a 402 Gene3D G3DSA:3.30.9.50 84 278 5.9E-98 T 23-10-2018 CDG62_13700 8e9350252c3c7d5860af4c72dbd3e53a 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 4 399 3.5E-111 T 23-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CDG62_12300 e981ca38381fbb69356a9c2587e0017b 322 Gene3D G3DSA:3.40.190.10 77 296 9.0E-44 T 23-10-2018 CDG62_12300 e981ca38381fbb69356a9c2587e0017b 322 SMART SM00062 80 307 2.1E-26 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG62_12300 e981ca38381fbb69356a9c2587e0017b 322 Gene3D G3DSA:3.40.190.10 166 266 9.0E-44 T 23-10-2018 CDG62_12300 e981ca38381fbb69356a9c2587e0017b 322 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 82 303 5.8E-39 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG62_12300 e981ca38381fbb69356a9c2587e0017b 322 SUPERFAMILY SSF53850 70 306 2.93E-44 T 23-10-2018 CDG62_08635 58d101bf728da001eea82d053334cb66 626 Gene3D G3DSA:3.50.50.60 2 220 6.8E-86 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_08635 58d101bf728da001eea82d053334cb66 626 Gene3D G3DSA:3.50.50.60 301 458 1.1E-55 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_08635 58d101bf728da001eea82d053334cb66 626 Gene3D G3DSA:1.10.10.1800 459 547 3.8E-21 T 23-10-2018 CDG62_08635 58d101bf728da001eea82d053334cb66 626 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 618 1.0E-269 T 23-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CDG62_08635 58d101bf728da001eea82d053334cb66 626 Pfam PF01134 Glucose inhibited division protein A 8 396 2.4E-164 T 23-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CDG62_08635 58d101bf728da001eea82d053334cb66 626 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 23-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CDG62_08635 58d101bf728da001eea82d053334cb66 626 Pfam PF13932 GidA associated domain 402 612 4.6E-73 T 23-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 CDG62_08635 58d101bf728da001eea82d053334cb66 626 SUPERFAMILY SSF51905 7 261 4.12E-52 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_08635 58d101bf728da001eea82d053334cb66 626 SMART SM01228 543 614 2.8E-40 T 23-10-2018 CDG62_08635 58d101bf728da001eea82d053334cb66 626 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 23-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CDG62_08635 58d101bf728da001eea82d053334cb66 626 Gene3D G3DSA:1.10.150.570 566 619 5.2E-21 T 23-10-2018 CDG62_08635 58d101bf728da001eea82d053334cb66 626 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 621 41.625 T 23-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CDG62_19150 d53495b955e38bec886a1de8221c4bea 170 Pfam PF00731 AIR carboxylase 12 159 5.2E-63 T 23-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CDG62_19150 d53495b955e38bec886a1de8221c4bea 170 SMART SM01001 10 161 3.6E-102 T 23-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CDG62_19150 d53495b955e38bec886a1de8221c4bea 170 Gene3D G3DSA:3.40.50.7700 1 169 9.7E-73 T 23-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 CDG62_19150 d53495b955e38bec886a1de8221c4bea 170 SUPERFAMILY SSF52255 11 166 6.02E-66 T 23-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 CDG62_19150 d53495b955e38bec886a1de8221c4bea 170 PIRSF PIRSF001338 7 167 7.3E-66 T 23-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CDG62_19150 d53495b955e38bec886a1de8221c4bea 170 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 12 165 1.6E-64 T 23-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CDG62_19150 d53495b955e38bec886a1de8221c4bea 170 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 12 165 32.087 T 23-10-2018 IPR033747 Class I PurE CDG62_03780 bcc32699f87030ba253c98b9bccd733c 194 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 194 1.6E-50 T 23-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CDG62_03780 bcc32699f87030ba253c98b9bccd733c 194 Gene3D G3DSA:2.40.50.140 1 124 1.7E-44 T 23-10-2018 CDG62_03780 bcc32699f87030ba253c98b9bccd733c 194 SUPERFAMILY SSF50249 2 194 3.15E-50 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_03780 bcc32699f87030ba253c98b9bccd733c 194 Pfam PF00436 Single-strand binding protein family 4 108 3.1E-39 T 23-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CDG62_03780 bcc32699f87030ba253c98b9bccd733c 194 PIRSF PIRSF002070 1 147 2.3E-34 T 23-10-2018 CDG62_03780 bcc32699f87030ba253c98b9bccd733c 194 PIRSF PIRSF002070 138 191 490.0 T 23-10-2018 CDG62_03780 bcc32699f87030ba253c98b9bccd733c 194 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 34.674 T 23-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CDG62_11975 09e10fac4ca794583f7247e07b81aa59 476 SUPERFAMILY SSF53383 76 474 8.16E-97 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_11975 09e10fac4ca794583f7247e07b81aa59 476 Gene3D G3DSA:3.90.1150.10 94 471 1.5E-141 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_11975 09e10fac4ca794583f7247e07b81aa59 476 Gene3D G3DSA:3.40.640.10 126 367 1.5E-141 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_11975 09e10fac4ca794583f7247e07b81aa59 476 Pfam PF00155 Aminotransferase class I and II 107 468 2.3E-49 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG62_13770 d8c84d5ce7f0cf7a76670be844d1bdb7 263 Gene3D G3DSA:3.90.850.10 5 263 2.3E-74 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDG62_13770 d8c84d5ce7f0cf7a76670be844d1bdb7 263 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 84 259 2.8E-12 T 23-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDG62_13770 d8c84d5ce7f0cf7a76670be844d1bdb7 263 SUPERFAMILY SSF56529 9 261 2.06E-70 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDG62_04385 dce543b849f8f298baf5893863f29ce2 291 Pfam PF00892 EamA-like transporter family 147 277 2.5E-17 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_04385 dce543b849f8f298baf5893863f29ce2 291 SUPERFAMILY SSF103481 182 280 2.48E-11 T 23-10-2018 CDG62_14180 3bcfbbb4186ffc76f906543ce94e80cb 686 SUPERFAMILY SSF56935 40 686 1.18E-121 T 23-10-2018 CDG62_14180 3bcfbbb4186ffc76f906543ce94e80cb 686 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 163 4.8E-28 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_14180 3bcfbbb4186ffc76f906543ce94e80cb 686 Pfam PF00593 TonB dependent receptor 217 682 1.2E-49 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_14180 3bcfbbb4186ffc76f906543ce94e80cb 686 Gene3D G3DSA:2.40.170.20 174 686 3.0E-111 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_14180 3bcfbbb4186ffc76f906543ce94e80cb 686 Gene3D G3DSA:2.170.130.10 39 168 1.7E-40 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_17795 274ccbada969cca384b2411954d2ffd9 114 Pfam PF09951 Protein of unknown function (DUF2185) 21 104 3.5E-30 T 23-10-2018 IPR018689 Domain of unknown function DUF2185 CDG62_18610 f9759cda62b3e216d486b3bfc3b189e9 200 Gene3D G3DSA:3.30.70.1070 121 200 5.3E-14 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDG62_18610 f9759cda62b3e216d486b3bfc3b189e9 200 Pfam PF05036 Sporulation related domain 127 199 1.9E-15 T 23-10-2018 IPR007730 Sporulation-like domain GO:0042834 CDG62_18610 f9759cda62b3e216d486b3bfc3b189e9 200 SUPERFAMILY SSF110997 126 199 3.14E-14 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDG62_17745 b321d95bd3317b3b5a181de753684dde 147 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 11 139 4.7E-30 T 23-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CDG62_17745 b321d95bd3317b3b5a181de753684dde 147 SUPERFAMILY SSF53098 8 140 9.41E-34 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_17745 b321d95bd3317b3b5a181de753684dde 147 Gene3D G3DSA:3.30.420.140 7 141 7.2E-34 T 23-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 CDG62_17745 b321d95bd3317b3b5a181de753684dde 147 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 8 143 20.66 T 23-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CDG62_17745 b321d95bd3317b3b5a181de753684dde 147 SMART SM00732 8 108 1.2E-26 T 23-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CDG62_17745 b321d95bd3317b3b5a181de753684dde 147 Pfam PF03652 Holliday junction resolvase 9 139 1.4E-33 T 23-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CDG62_16475 52c34e1a9eda2edaa242551822c423aa 255 Gene3D G3DSA:3.40.50.720 2 243 7.4E-57 T 23-10-2018 CDG62_16475 52c34e1a9eda2edaa242551822c423aa 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.4E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16475 52c34e1a9eda2edaa242551822c423aa 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.4E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16475 52c34e1a9eda2edaa242551822c423aa 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.4E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16475 52c34e1a9eda2edaa242551822c423aa 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.4E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16475 52c34e1a9eda2edaa242551822c423aa 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 2.4E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16475 52c34e1a9eda2edaa242551822c423aa 255 Pfam PF00106 short chain dehydrogenase 4 190 1.1E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16475 52c34e1a9eda2edaa242551822c423aa 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 3.8E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16475 52c34e1a9eda2edaa242551822c423aa 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 3.8E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16475 52c34e1a9eda2edaa242551822c423aa 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 3.8E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_16475 52c34e1a9eda2edaa242551822c423aa 255 SUPERFAMILY SSF51735 3 228 1.26E-58 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_02940 029f41f079cb7d7d7096a02a196e6122 303 SUPERFAMILY SSF55486 158 282 2.56E-8 T 23-10-2018 CDG62_02940 029f41f079cb7d7d7096a02a196e6122 303 Gene3D G3DSA:3.40.390.10 121 302 8.3E-15 T 23-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 CDG62_02940 029f41f079cb7d7d7096a02a196e6122 303 Pfam PF00413 Matrixin 41 298 9.4E-13 T 23-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 CDG62_02940 029f41f079cb7d7d7096a02a196e6122 303 SUPERFAMILY SSF55486 248 301 9.56E-15 T 23-10-2018 CDG62_16005 d2c16f185eebdb14d658a685a3eec633 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 9.8E-18 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_16005 d2c16f185eebdb14d658a685a3eec633 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 9.8E-18 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_16005 d2c16f185eebdb14d658a685a3eec633 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 9.8E-18 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_16005 d2c16f185eebdb14d658a685a3eec633 154 Gene3D G3DSA:3.30.70.920 56 149 8.0E-21 T 23-10-2018 CDG62_16005 d2c16f185eebdb14d658a685a3eec633 154 SUPERFAMILY SSF54909 66 152 3.22E-18 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_16005 d2c16f185eebdb14d658a685a3eec633 154 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 1.6E-19 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG62_16005 d2c16f185eebdb14d658a685a3eec633 154 SMART SM00344 4 113 2.7E-45 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG62_16005 d2c16f185eebdb14d658a685a3eec633 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 23-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDG62_16005 d2c16f185eebdb14d658a685a3eec633 154 SUPERFAMILY SSF46785 3 61 7.72E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_16005 d2c16f185eebdb14d658a685a3eec633 154 Gene3D G3DSA:1.10.10.10 1 55 3.8E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_16005 d2c16f185eebdb14d658a685a3eec633 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 1.9E-18 T 23-10-2018 CDG62_18720 403d2e0cca07cc5cd80027028347a69a 398 SMART SM00825 Beta-ketoacyl synthase 17 398 2.9E-7 T 23-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDG62_18720 403d2e0cca07cc5cd80027028347a69a 398 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 245 351 6.1E-27 T 23-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CDG62_18720 403d2e0cca07cc5cd80027028347a69a 398 SUPERFAMILY SSF53901 210 394 2.8E-46 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_18720 403d2e0cca07cc5cd80027028347a69a 398 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 23-10-2018 IPR018201 Beta-ketoacyl synthase, active site CDG62_18720 403d2e0cca07cc5cd80027028347a69a 398 Gene3D G3DSA:3.40.47.10 16 239 7.9E-28 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_18720 403d2e0cca07cc5cd80027028347a69a 398 SUPERFAMILY SSF53901 50 236 2.47E-31 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_18720 403d2e0cca07cc5cd80027028347a69a 398 Gene3D G3DSA:3.40.47.10 246 392 5.4E-39 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_18720 403d2e0cca07cc5cd80027028347a69a 398 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 93 236 1.5E-20 T 23-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CDG62_09340 4f78dac143ab07204ef0e50c4af28bbc 138 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 35 132 28.244 T 23-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CDG62_09340 4f78dac143ab07204ef0e50c4af28bbc 138 SUPERFAMILY SSF54736 52 136 2.98E-31 T 23-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDG62_09340 4f78dac143ab07204ef0e50c4af28bbc 138 Gene3D G3DSA:3.30.1390.10 33 138 1.4E-40 T 23-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDG62_09340 4f78dac143ab07204ef0e50c4af28bbc 138 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 54 132 4.1E-33 T 23-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 CDG62_03145 e1462b8f880ae7cf3abbb8241b97381d 273 PIRSF PIRSF000161 3 270 9.6E-83 T 23-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_03145 e1462b8f880ae7cf3abbb8241b97381d 273 SUPERFAMILY SSF55347 129 238 3.49E-36 T 23-10-2018 CDG62_03145 e1462b8f880ae7cf3abbb8241b97381d 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 127 4.5E-39 T 23-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_03145 e1462b8f880ae7cf3abbb8241b97381d 273 SUPERFAMILY SSF51735 5 270 1.74E-48 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_03145 e1462b8f880ae7cf3abbb8241b97381d 273 Gene3D G3DSA:3.30.360.10 129 236 2.9E-98 T 23-10-2018 CDG62_03145 e1462b8f880ae7cf3abbb8241b97381d 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 130 266 5.1E-41 T 23-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_03145 e1462b8f880ae7cf3abbb8241b97381d 273 Gene3D G3DSA:3.40.50.720 7 266 2.9E-98 T 23-10-2018 CDG62_03145 e1462b8f880ae7cf3abbb8241b97381d 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 152 169 - T 23-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_03145 e1462b8f880ae7cf3abbb8241b97381d 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 267 7.0E-98 T 23-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_03145 e1462b8f880ae7cf3abbb8241b97381d 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 267 34.267 T 23-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_14300 73204749601ad7f32b2964b0bd29d291 624 SUPERFAMILY SSF55073 455 616 1.33E-36 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_14300 73204749601ad7f32b2964b0bd29d291 624 Pfam PF00990 Diguanylate cyclase, GGDEF domain 451 613 2.3E-38 T 23-10-2018 IPR000160 GGDEF domain CDG62_14300 73204749601ad7f32b2964b0bd29d291 624 Gene3D G3DSA:3.30.70.270 436 617 6.2E-45 T 23-10-2018 CDG62_14300 73204749601ad7f32b2964b0bd29d291 624 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 446 616 1.4E-37 T 23-10-2018 IPR000160 GGDEF domain CDG62_14300 73204749601ad7f32b2964b0bd29d291 624 SMART SM00267 439 617 1.4E-45 T 23-10-2018 IPR000160 GGDEF domain CDG62_07815 958d38b6a01a2c7eef886404a876723b 55 Gene3D G3DSA:2.10.70.10 18 55 8.1E-18 T 23-10-2018 CDG62_07815 958d38b6a01a2c7eef886404a876723b 55 Pfam PF10636 Hemin uptake protein hemP 20 55 1.3E-16 T 23-10-2018 IPR019600 Hemin uptake protein HemP CDG62_15620 99f0b4d04cdf37364f5cae15bc478ec9 257 ProSitePatterns PS00893 Nudix box signature. 154 175 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDG62_15620 99f0b4d04cdf37364f5cae15bc478ec9 257 Gene3D G3DSA:3.90.79.20 2 119 2.1E-19 T 23-10-2018 CDG62_15620 99f0b4d04cdf37364f5cae15bc478ec9 257 Pfam PF00293 NUDIX domain 124 229 2.3E-17 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG62_15620 99f0b4d04cdf37364f5cae15bc478ec9 257 SUPERFAMILY SSF55811 73 239 2.23E-43 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG62_15620 99f0b4d04cdf37364f5cae15bc478ec9 257 Gene3D G3DSA:3.90.79.10 120 247 1.1E-38 T 23-10-2018 CDG62_15620 99f0b4d04cdf37364f5cae15bc478ec9 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 87 118 5.2E-11 T 23-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CDG62_15620 99f0b4d04cdf37364f5cae15bc478ec9 257 PRINTS PR00502 NUDIX hydrolase family signature 149 163 6.4E-5 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG62_15620 99f0b4d04cdf37364f5cae15bc478ec9 257 PRINTS PR00502 NUDIX hydrolase family signature 163 178 6.4E-5 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG62_06230 112fb962172b935b31633167b9339317 697 Gene3D G3DSA:2.170.130.10 38 166 5.1E-19 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_06230 112fb962172b935b31633167b9339317 697 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 680 697 - T 23-10-2018 IPR010917 TonB-dependent receptor, conserved site CDG62_06230 112fb962172b935b31633167b9339317 697 Gene3D G3DSA:2.40.170.20 167 697 1.9E-87 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_06230 112fb962172b935b31633167b9339317 697 Pfam PF00593 TonB dependent receptor 231 695 2.2E-38 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_06230 112fb962172b935b31633167b9339317 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 54 697 5.6E-102 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDG62_06230 112fb962172b935b31633167b9339317 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 149 2.5E-15 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_06230 112fb962172b935b31633167b9339317 697 SUPERFAMILY SSF56935 48 697 6.41E-109 T 23-10-2018 CDG62_02305 91503eaffc6220c4ce29d1fa85dab009 390 Gene3D G3DSA:3.90.220.20 2 385 8.2E-61 T 23-10-2018 CDG62_02305 91503eaffc6220c4ce29d1fa85dab009 390 Gene3D G3DSA:3.90.220.20 215 338 8.2E-61 T 23-10-2018 CDG62_02305 91503eaffc6220c4ce29d1fa85dab009 390 SUPERFAMILY SSF116734 2 205 2.13E-39 T 23-10-2018 CDG62_02305 91503eaffc6220c4ce29d1fa85dab009 390 SUPERFAMILY SSF116734 208 388 2.78E-25 T 23-10-2018 CDG62_02305 91503eaffc6220c4ce29d1fa85dab009 390 Gene3D G3DSA:1.10.287.1120 154 381 8.2E-61 T 23-10-2018 CDG62_02305 91503eaffc6220c4ce29d1fa85dab009 390 Pfam PF01420 Type I restriction modification DNA specificity domain 3 181 2.1E-12 T 23-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CDG62_02305 91503eaffc6220c4ce29d1fa85dab009 390 Pfam PF01420 Type I restriction modification DNA specificity domain 212 366 1.9E-8 T 23-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CDG62_11200 f611c213fc20b160e45b812ddcd868e7 465 Pfam PF00355 Rieske [2Fe-2S] domain 52 136 1.0E-22 T 23-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDG62_11200 f611c213fc20b160e45b812ddcd868e7 465 SUPERFAMILY SSF55961 171 451 4.55E-68 T 23-10-2018 CDG62_11200 f611c213fc20b160e45b812ddcd868e7 465 Gene3D G3DSA:3.90.380.10 30 444 2.3E-112 T 23-10-2018 CDG62_11200 f611c213fc20b160e45b812ddcd868e7 465 TIGRFAM TIGR03229 benzo_1_2_benA: benzoate 1,2-dioxygenase, large subunit 15 446 7.8E-271 T 23-10-2018 IPR017639 Benzoate 1,2-dioxygenase, large subunit CDG62_11200 f611c213fc20b160e45b812ddcd868e7 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 196 218 6.0E-48 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG62_11200 f611c213fc20b160e45b812ddcd868e7 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 155 181 6.0E-48 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG62_11200 f611c213fc20b160e45b812ddcd868e7 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 37 62 6.0E-48 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG62_11200 f611c213fc20b160e45b812ddcd868e7 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 67 82 6.0E-48 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG62_11200 f611c213fc20b160e45b812ddcd868e7 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 88 108 6.0E-48 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG62_11200 f611c213fc20b160e45b812ddcd868e7 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 109 129 6.0E-48 T 23-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 CDG62_11200 f611c213fc20b160e45b812ddcd868e7 465 SUPERFAMILY SSF50022 15 171 3.4E-44 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG62_11200 f611c213fc20b160e45b812ddcd868e7 465 Gene3D G3DSA:2.102.10.10 52 179 2.3E-112 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG62_11200 f611c213fc20b160e45b812ddcd868e7 465 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 95 118 - T 23-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 CDG62_11200 f611c213fc20b160e45b812ddcd868e7 465 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 202 444 1.0E-19 T 23-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 CDG62_01810 aa1d3331fab204bc6b6a29fc95fa9448 337 Gene3D G3DSA:1.10.150.130 13 100 1.1E-31 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG62_01810 aa1d3331fab204bc6b6a29fc95fa9448 337 Pfam PF00589 Phage integrase family 116 317 4.3E-64 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG62_01810 aa1d3331fab204bc6b6a29fc95fa9448 337 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 98 5.8E-24 T 23-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDG62_01810 aa1d3331fab204bc6b6a29fc95fa9448 337 Gene3D G3DSA:1.10.443.10 106 318 2.2E-67 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG62_01810 aa1d3331fab204bc6b6a29fc95fa9448 337 SUPERFAMILY SSF56349 16 316 9.42E-51 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG62_01810 aa1d3331fab204bc6b6a29fc95fa9448 337 TIGRFAM TIGR02249 integrase_gron: integron integrase 16 330 3.9E-153 T 23-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 CDG62_02240 32c030bb81a5ac71a0b587867ab6f054 102 Gene3D G3DSA:3.30.70.100 1 91 1.4E-16 T 23-10-2018 CDG62_02240 32c030bb81a5ac71a0b587867ab6f054 102 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 72 3.8E-10 T 23-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CDG62_02240 32c030bb81a5ac71a0b587867ab6f054 102 SUPERFAMILY SSF54909 1 95 2.62E-18 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_05260 a1007395464b7dc0af6b76c9b0abddfd 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 8.5E-131 T 23-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDG62_05260 a1007395464b7dc0af6b76c9b0abddfd 338 SUPERFAMILY SSF48179 183 332 1.56E-64 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_05260 a1007395464b7dc0af6b76c9b0abddfd 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 44.677 T 23-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDG62_05260 a1007395464b7dc0af6b76c9b0abddfd 338 SUPERFAMILY SSF51735 1 182 9.61E-75 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_05260 a1007395464b7dc0af6b76c9b0abddfd 338 Gene3D G3DSA:3.40.50.720 1 181 5.4E-79 T 23-10-2018 CDG62_05260 a1007395464b7dc0af6b76c9b0abddfd 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 1.3E-75 T 23-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDG62_05260 a1007395464b7dc0af6b76c9b0abddfd 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 1.6E-58 T 23-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDG62_05260 a1007395464b7dc0af6b76c9b0abddfd 338 PIRSF PIRSF000116 2 203 4.0E-52 T 23-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDG62_05260 a1007395464b7dc0af6b76c9b0abddfd 338 PIRSF PIRSF000116 201 333 7.2E-13 T 23-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CDG62_05260 a1007395464b7dc0af6b76c9b0abddfd 338 Gene3D G3DSA:1.10.3730.40 182 338 2.4E-70 T 23-10-2018 CDG62_13170 d191659115f981bc383896809762bc7a 411 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 411 3.4E-151 T 23-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CDG62_13170 d191659115f981bc383896809762bc7a 411 Pfam PF02687 FtsX-like permease family 298 404 2.0E-13 T 23-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDG62_13170 d191659115f981bc383896809762bc7a 411 Pfam PF12704 MacB-like periplasmic core domain 28 240 2.9E-13 T 23-10-2018 IPR025857 MacB-like periplasmic core domain CDG62_01440 6881c335c5ca86a78a1b34a31832ed6b 368 SUPERFAMILY SSF53067 17 187 3.89E-15 T 23-10-2018 CDG62_01440 6881c335c5ca86a78a1b34a31832ed6b 368 SUPERFAMILY SSF53067 204 357 1.3E-21 T 23-10-2018 CDG62_01440 6881c335c5ca86a78a1b34a31832ed6b 368 Pfam PF06406 StbA protein 19 355 7.2E-8 T 23-10-2018 IPR009440 Plasmid segregation protein ParM/StbA CDG62_01440 6881c335c5ca86a78a1b34a31832ed6b 368 Gene3D G3DSA:3.30.420.40 206 329 6.3E-40 T 23-10-2018 CDG62_01440 6881c335c5ca86a78a1b34a31832ed6b 368 Gene3D G3DSA:3.30.420.40 20 199 6.3E-40 T 23-10-2018 CDG62_05670 d9776100ceaecd67ddc6b55f60c2f54d 213 SUPERFAMILY SSF52833 3 209 4.13E-66 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_05670 d9776100ceaecd67ddc6b55f60c2f54d 213 Gene3D G3DSA:3.40.30.10 1 145 4.4E-47 T 23-10-2018 CDG62_05670 d9776100ceaecd67ddc6b55f60c2f54d 213 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 195 1.1E-11 T 23-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG62_05670 d9776100ceaecd67ddc6b55f60c2f54d 213 Pfam PF00578 AhpC/TSA family 6 135 3.7E-28 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG62_05670 d9776100ceaecd67ddc6b55f60c2f54d 213 PIRSF PIRSF000239 1 209 2.7E-76 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG62_05670 d9776100ceaecd67ddc6b55f60c2f54d 213 Gene3D G3DSA:3.30.1020.10 146 210 5.0E-27 T 23-10-2018 CDG62_07820 68260acf0b6412aaa00a8ca809bdd9b6 299 Pfam PF00293 NUDIX domain 7 124 1.1E-16 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG62_07820 68260acf0b6412aaa00a8ca809bdd9b6 299 Pfam PF02581 Thiamine monophosphate synthase 190 299 6.8E-16 T 23-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_07820 68260acf0b6412aaa00a8ca809bdd9b6 299 SUPERFAMILY SSF51391 192 299 1.96E-20 T 23-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_07820 68260acf0b6412aaa00a8ca809bdd9b6 299 Gene3D G3DSA:3.20.20.70 153 299 3.1E-23 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_07820 68260acf0b6412aaa00a8ca809bdd9b6 299 PRINTS PR00502 NUDIX hydrolase family signature 34 48 3.6E-7 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG62_07820 68260acf0b6412aaa00a8ca809bdd9b6 299 PRINTS PR00502 NUDIX hydrolase family signature 48 63 3.6E-7 T 23-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CDG62_07820 68260acf0b6412aaa00a8ca809bdd9b6 299 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDG62_07820 68260acf0b6412aaa00a8ca809bdd9b6 299 SUPERFAMILY SSF55811 3 126 1.9E-28 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG62_07820 68260acf0b6412aaa00a8ca809bdd9b6 299 Gene3D G3DSA:3.90.79.10 2 132 1.3E-28 T 23-10-2018 CDG62_05940 8aa491ccdf66d895b9920d4ef854ee3b 161 Pfam PF06073 Bacterial protein of unknown function (DUF934) 54 155 2.9E-31 T 23-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 CDG62_05940 8aa491ccdf66d895b9920d4ef854ee3b 161 PIRSF PIRSF030820 1 160 2.7E-33 T 23-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 CDG62_13355 2fe9eb1a938b6c4147ade34f64e2be01 297 Gene3D G3DSA:1.10.1040.10 164 294 4.7E-46 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDG62_13355 2fe9eb1a938b6c4147ade34f64e2be01 297 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 5 291 7.0E-119 T 23-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 CDG62_13355 2fe9eb1a938b6c4147ade34f64e2be01 297 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 289 2.4E-35 T 23-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CDG62_13355 2fe9eb1a938b6c4147ade34f64e2be01 297 SUPERFAMILY SSF51735 1 161 8.06E-49 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_13355 2fe9eb1a938b6c4147ade34f64e2be01 297 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 1.2E-50 T 23-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CDG62_13355 2fe9eb1a938b6c4147ade34f64e2be01 297 PIRSF PIRSF000103 1 295 7.3E-76 T 23-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDG62_13355 2fe9eb1a938b6c4147ade34f64e2be01 297 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 23-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDG62_13355 2fe9eb1a938b6c4147ade34f64e2be01 297 Gene3D G3DSA:3.40.50.720 1 162 7.7E-59 T 23-10-2018 CDG62_13355 2fe9eb1a938b6c4147ade34f64e2be01 297 SUPERFAMILY SSF48179 163 291 1.25E-37 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_08395 8bed73aaacfe3a9644ef9f9c331c0225 331 SUPERFAMILY SSF53850 6 243 3.58E-17 T 23-10-2018 CDG62_08395 8bed73aaacfe3a9644ef9f9c331c0225 331 Gene3D G3DSA:3.40.190.10 11 316 1.9E-74 T 23-10-2018 CDG62_08395 8bed73aaacfe3a9644ef9f9c331c0225 331 Gene3D G3DSA:3.40.190.10 95 210 1.9E-74 T 23-10-2018 CDG62_08395 8bed73aaacfe3a9644ef9f9c331c0225 331 Pfam PF13379 NMT1-like family 3 242 6.1E-52 T 23-10-2018 CDG62_02705 f40dfcbab279074bd95baf9034fa3978 395 Gene3D G3DSA:2.40.30.170 48 297 1.4E-93 T 23-10-2018 CDG62_02705 f40dfcbab279074bd95baf9034fa3978 395 Gene3D G3DSA:1.10.287.470 94 167 1.4E-93 T 23-10-2018 CDG62_02705 f40dfcbab279074bd95baf9034fa3978 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 368 8.7E-78 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG62_02705 f40dfcbab279074bd95baf9034fa3978 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 287 2.2E-19 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG62_02705 f40dfcbab279074bd95baf9034fa3978 395 Gene3D G3DSA:2.40.50.100 59 203 1.4E-93 T 23-10-2018 CDG62_02705 f40dfcbab279074bd95baf9034fa3978 395 Gene3D G3DSA:2.40.420.20 298 366 1.4E-93 T 23-10-2018 CDG62_02705 f40dfcbab279074bd95baf9034fa3978 395 SUPERFAMILY SSF111369 49 292 5.75E-70 T 23-10-2018 CDG62_11105 3d6fd5d09472e18d5510b4d54026eccb 51 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 50 3.2E-12 T 23-10-2018 CDG62_11105 3d6fd5d09472e18d5510b4d54026eccb 51 Gene3D G3DSA:3.40.50.720 5 51 6.4E-14 T 23-10-2018 CDG62_11105 3d6fd5d09472e18d5510b4d54026eccb 51 SUPERFAMILY SSF51735 14 51 2.96E-14 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_14675 ed6ac1812ac8fad3aea10d8c39a5a3cb 314 SUPERFAMILY SSF53850 7 287 1.37E-59 T 23-10-2018 CDG62_14675 ed6ac1812ac8fad3aea10d8c39a5a3cb 314 Gene3D G3DSA:3.40.190.10 44 289 4.3E-95 T 23-10-2018 CDG62_14675 ed6ac1812ac8fad3aea10d8c39a5a3cb 314 SMART SM00062 54 286 6.8E-51 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG62_14675 ed6ac1812ac8fad3aea10d8c39a5a3cb 314 Gene3D G3DSA:3.40.190.10 149 243 4.3E-95 T 23-10-2018 CDG62_14675 ed6ac1812ac8fad3aea10d8c39a5a3cb 314 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 284 1.3E-47 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG62_14735 df29cc7e19f44936196a219cbfb65eee 418 Pfam PF13000 Acetyl-coenzyme A transporter 1 8 157 2.6E-23 T 23-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 CDG62_14735 df29cc7e19f44936196a219cbfb65eee 418 SUPERFAMILY SSF103473 6 408 4.32E-24 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_14735 df29cc7e19f44936196a219cbfb65eee 418 Gene3D G3DSA:1.20.1250.20 3 205 1.7E-8 T 23-10-2018 CDG62_14735 df29cc7e19f44936196a219cbfb65eee 418 Gene3D G3DSA:1.20.1250.20 212 412 1.8E-6 T 23-10-2018 CDG62_05795 732cf0ab8396739af1a3677d080202ca 143 Pfam PF04386 Stringent starvation protein B 11 132 3.8E-37 T 23-10-2018 IPR007481 Stringent starvation protein B CDG62_05795 732cf0ab8396739af1a3677d080202ca 143 PIRSF PIRSF005276 5 143 2.3E-54 T 23-10-2018 IPR007481 Stringent starvation protein B CDG62_05795 732cf0ab8396739af1a3677d080202ca 143 SUPERFAMILY SSF101738 7 117 4.19E-49 T 23-10-2018 IPR036760 SspB-like superfamily CDG62_05795 732cf0ab8396739af1a3677d080202ca 143 Gene3D G3DSA:2.30.30.220 4 132 1.2E-52 T 23-10-2018 IPR036760 SspB-like superfamily CDG62_11690 99727e69564988d8174cb04cdddb1fed 754 Gene3D G3DSA:2.40.170.20 178 753 8.9E-61 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_11690 99727e69564988d8174cb04cdddb1fed 754 Gene3D G3DSA:2.170.130.10 49 170 7.7E-23 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_11690 99727e69564988d8174cb04cdddb1fed 754 SUPERFAMILY SSF56935 42 754 1.68E-96 T 23-10-2018 CDG62_11690 99727e69564988d8174cb04cdddb1fed 754 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 165 8.7E-20 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_11690 99727e69564988d8174cb04cdddb1fed 754 Pfam PF00593 TonB dependent receptor 306 753 8.2E-34 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_12280 666fe82b9cd0ddbc1934ec072f842e06 391 Gene3D G3DSA:3.40.640.10 16 263 1.8E-142 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_12280 666fe82b9cd0ddbc1934ec072f842e06 391 Pfam PF00266 Aminotransferase class-V 5 371 2.0E-78 T 23-10-2018 IPR000192 Aminotransferase class V domain CDG62_12280 666fe82b9cd0ddbc1934ec072f842e06 391 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 23-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CDG62_12280 666fe82b9cd0ddbc1934ec072f842e06 391 SUPERFAMILY SSF53383 4 383 1.48E-96 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_12280 666fe82b9cd0ddbc1934ec072f842e06 391 Gene3D G3DSA:3.90.1150.10 5 375 1.8E-142 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_12280 666fe82b9cd0ddbc1934ec072f842e06 391 PIRSF PIRSF005572 2 386 1.4E-117 T 23-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 CDG62_09995 715e67582a6dbc9564317e8831b1e769 271 Gene3D G3DSA:1.10.30.40 10 61 1.0E-11 T 23-10-2018 CDG62_09995 715e67582a6dbc9564317e8831b1e769 271 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 16 253 3.2E-88 T 23-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CDG62_09995 715e67582a6dbc9564317e8831b1e769 271 PIRSF PIRSF018982 5 263 1.9E-86 T 23-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CDG62_09995 715e67582a6dbc9564317e8831b1e769 271 Gene3D G3DSA:3.40.50.11240 72 252 5.5E-61 T 23-10-2018 CDG62_06630 d38374ed65eb39949e293faa6391a245 272 Pfam PF01391 Collagen triple helix repeat (20 copies) 24 76 3.8E-9 T 23-10-2018 IPR008160 Collagen triple helix repeat CDG62_06630 d38374ed65eb39949e293faa6391a245 272 Pfam PF01391 Collagen triple helix repeat (20 copies) 3 52 1.5E-8 T 23-10-2018 IPR008160 Collagen triple helix repeat CDG62_06630 d38374ed65eb39949e293faa6391a245 272 SUPERFAMILY SSF54523 178 271 6.59E-19 T 23-10-2018 CDG62_06630 d38374ed65eb39949e293faa6391a245 272 Pfam PF03895 YadA-like membrane anchor domain 211 271 2.2E-16 T 23-10-2018 IPR005594 YadA-like, C-terminal CDG62_06630 d38374ed65eb39949e293faa6391a245 272 Gene3D G3DSA:1.20.5.320 45 93 6.1E-6 T 23-10-2018 CDG62_06630 d38374ed65eb39949e293faa6391a245 272 Gene3D G3DSA:3.30.1300.30 164 271 1.9E-29 T 23-10-2018 CDG62_03790 314bf364eac614a3045adcc940cd5093 296 SUPERFAMILY SSF53850 94 277 8.32E-22 T 23-10-2018 CDG62_03790 314bf364eac614a3045adcc940cd5093 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.5E-12 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_03790 314bf364eac614a3045adcc940cd5093 296 Pfam PF03466 LysR substrate binding domain 94 278 4.7E-19 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_03790 314bf364eac614a3045adcc940cd5093 296 Gene3D G3DSA:1.10.10.10 2 91 2.0E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_03790 314bf364eac614a3045adcc940cd5093 296 Gene3D G3DSA:3.40.190.10 186 266 1.2E-5 T 23-10-2018 CDG62_03790 314bf364eac614a3045adcc940cd5093 296 Gene3D G3DSA:3.40.190.10 94 185 3.1E-5 T 23-10-2018 CDG62_03790 314bf364eac614a3045adcc940cd5093 296 SUPERFAMILY SSF46785 2 113 2.07E-14 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_07680 aa29d19d8154ed3535004d4e1efcadda 232 SUPERFAMILY SSF53098 3 199 5.84E-22 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_07680 aa29d19d8154ed3535004d4e1efcadda 232 SMART SM00479 2 170 3.1E-4 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG62_07680 aa29d19d8154ed3535004d4e1efcadda 232 Gene3D G3DSA:3.30.420.10 3 187 8.7E-20 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_07680 aa29d19d8154ed3535004d4e1efcadda 232 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 188 213 1.4E-4 T 23-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CDG62_14485 a828a2f64eee6cff137d3a3cf1c3edad 690 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 655 1.1E-40 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDG62_14485 a828a2f64eee6cff137d3a3cf1c3edad 690 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 553 582 1.5E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDG62_14485 a828a2f64eee6cff137d3a3cf1c3edad 690 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 524 551 1.5E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDG62_14485 a828a2f64eee6cff137d3a3cf1c3edad 690 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 447 476 1.5E-20 T 23-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 CDG62_14485 a828a2f64eee6cff137d3a3cf1c3edad 690 Gene3D G3DSA:1.10.287.950 363 689 2.2E-62 T 23-10-2018 CDG62_14485 a828a2f64eee6cff137d3a3cf1c3edad 690 SUPERFAMILY SSF58104 386 688 1.74E-68 T 23-10-2018 CDG62_14485 a828a2f64eee6cff137d3a3cf1c3edad 690 SMART SM00283 426 687 4.9E-84 T 23-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 CDG62_04130 c0921b9128ca54cfeb5953b30b0c473d 339 Gene3D G3DSA:3.40.190.10 35 303 3.8E-127 T 23-10-2018 CDG62_04130 c0921b9128ca54cfeb5953b30b0c473d 339 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 24 334 1.0E-133 T 23-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CDG62_04130 c0921b9128ca54cfeb5953b30b0c473d 339 SUPERFAMILY SSF53850 28 335 8.16E-81 T 23-10-2018 CDG62_04130 c0921b9128ca54cfeb5953b30b0c473d 339 Gene3D G3DSA:3.40.190.10 122 333 3.8E-127 T 23-10-2018 CDG62_04130 c0921b9128ca54cfeb5953b30b0c473d 339 Pfam PF13531 Bacterial extracellular solute-binding protein 53 288 4.9E-38 T 23-10-2018 CDG62_17440 16dc634e5875b54e47ba9cc9a3f6d29c 570 Gene3D G3DSA:3.50.50.60 10 407 2.2E-189 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_17440 16dc634e5875b54e47ba9cc9a3f6d29c 570 SUPERFAMILY SSF51905 6 445 1.03E-47 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_17440 16dc634e5875b54e47ba9cc9a3f6d29c 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 5.1E-7 T 23-10-2018 CDG62_17440 16dc634e5875b54e47ba9cc9a3f6d29c 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 183 198 5.1E-7 T 23-10-2018 CDG62_17440 16dc634e5875b54e47ba9cc9a3f6d29c 570 Gene3D G3DSA:3.30.70.20 471 565 2.2E-37 T 23-10-2018 CDG62_17440 16dc634e5875b54e47ba9cc9a3f6d29c 570 Gene3D G3DSA:3.30.9.90 83 470 2.2E-189 T 23-10-2018 CDG62_17440 16dc634e5875b54e47ba9cc9a3f6d29c 570 SUPERFAMILY SSF54862 470 570 4.63E-29 T 23-10-2018 CDG62_17440 16dc634e5875b54e47ba9cc9a3f6d29c 570 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 466 567 2.1E-50 T 23-10-2018 CDG62_17440 16dc634e5875b54e47ba9cc9a3f6d29c 570 Pfam PF13450 NAD(P)-binding Rossmann-like domain 15 61 7.6E-6 T 23-10-2018 CDG62_17440 16dc634e5875b54e47ba9cc9a3f6d29c 570 SUPERFAMILY SSF54373 215 311 3.49E-33 T 23-10-2018 CDG62_03765 0781672b2edc04d6dbe2e95bda6fb1e7 224 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 17 214 5.9E-44 T 23-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 CDG62_03765 0781672b2edc04d6dbe2e95bda6fb1e7 224 Pfam PF03070 TENA/THI-4/PQQC family 22 214 8.6E-39 T 23-10-2018 IPR004305 Thiaminase-2/PQQC CDG62_03765 0781672b2edc04d6dbe2e95bda6fb1e7 224 Gene3D G3DSA:1.20.910.10 1 221 7.6E-67 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDG62_03765 0781672b2edc04d6dbe2e95bda6fb1e7 224 SUPERFAMILY SSF48613 1 213 2.23E-67 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDG62_01840 2f66ecbf1d11e69719c4df2c22f97a5a 308 SUPERFAMILY SSF56601 30 296 6.77E-59 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG62_01840 2f66ecbf1d11e69719c4df2c22f97a5a 308 Pfam PF13354 Beta-lactamase enzyme family 59 271 2.2E-39 T 23-10-2018 CDG62_01840 2f66ecbf1d11e69719c4df2c22f97a5a 308 PRINTS PR00118 Beta-lactamase class A signature 65 82 7.2E-12 T 23-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CDG62_01840 2f66ecbf1d11e69719c4df2c22f97a5a 308 PRINTS PR00118 Beta-lactamase class A signature 147 171 7.2E-12 T 23-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CDG62_01840 2f66ecbf1d11e69719c4df2c22f97a5a 308 PRINTS PR00118 Beta-lactamase class A signature 226 241 7.2E-12 T 23-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CDG62_01840 2f66ecbf1d11e69719c4df2c22f97a5a 308 PRINTS PR00118 Beta-lactamase class A signature 209 224 7.2E-12 T 23-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CDG62_01840 2f66ecbf1d11e69719c4df2c22f97a5a 308 Gene3D G3DSA:3.40.710.10 27 308 3.8E-83 T 23-10-2018 CDG62_01840 2f66ecbf1d11e69719c4df2c22f97a5a 308 ProSitePatterns PS00146 Beta-lactamase class-A active site. 67 82 - T 23-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 CDG62_01895 d26c7b758f91ea100566b812858da12b 330 Gene3D G3DSA:3.40.50.300 24 212 6.7E-18 T 23-10-2018 CDG62_01895 d26c7b758f91ea100566b812858da12b 330 Pfam PF05621 Bacterial TniB protein 27 278 1.9E-103 T 23-10-2018 IPR008868 Bacterial TniB CDG62_01895 d26c7b758f91ea100566b812858da12b 330 SUPERFAMILY SSF52540 34 228 2.14E-17 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_13275 bec6caa4db108a845aef991209b41331 327 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 324 2.2E-40 T 23-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_13275 bec6caa4db108a845aef991209b41331 327 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 18 322 2.9E-116 T 23-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CDG62_13275 bec6caa4db108a845aef991209b41331 327 PRINTS PR00982 Lysyl-tRNA synthetase signature 32 42 8.0E-12 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG62_13275 bec6caa4db108a845aef991209b41331 327 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 8.0E-12 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG62_13275 bec6caa4db108a845aef991209b41331 327 PRINTS PR00982 Lysyl-tRNA synthetase signature 98 115 8.0E-12 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG62_13275 bec6caa4db108a845aef991209b41331 327 PRINTS PR00982 Lysyl-tRNA synthetase signature 80 93 8.0E-12 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG62_13275 bec6caa4db108a845aef991209b41331 327 SUPERFAMILY SSF55681 15 324 6.22E-65 T 23-10-2018 CDG62_13275 bec6caa4db108a845aef991209b41331 327 Gene3D G3DSA:3.30.930.10 2 326 3.5E-91 T 23-10-2018 CDG62_06465 af3075b2439e16618069a460adc0aeb9 169 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 25 168 4.8E-47 T 23-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06465 af3075b2439e16618069a460adc0aeb9 169 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 25 168 2.1E-47 T 23-10-2018 CDG62_06465 af3075b2439e16618069a460adc0aeb9 169 PIRSF PIRSF000216 5 169 5.6E-50 T 23-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06465 af3075b2439e16618069a460adc0aeb9 169 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 126 144 - T 23-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06465 af3075b2439e16618069a460adc0aeb9 169 Gene3D G3DSA:3.40.30.10 86 168 2.2E-23 T 23-10-2018 CDG62_06465 af3075b2439e16618069a460adc0aeb9 169 Gene3D G3DSA:1.10.10.1590 16 85 1.3E-16 T 23-10-2018 CDG62_06465 af3075b2439e16618069a460adc0aeb9 169 SUPERFAMILY SSF52833 18 168 2.68E-47 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_08425 6b7a5ae54cd3809f6e41d60a66b06cdd 208 SUPERFAMILY SSF53448 16 201 8.72E-23 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_08425 6b7a5ae54cd3809f6e41d60a66b06cdd 208 Pfam PF12804 MobA-like NTP transferase domain 16 174 4.9E-23 T 23-10-2018 IPR025877 MobA-like NTP transferase CDG62_08425 6b7a5ae54cd3809f6e41d60a66b06cdd 208 Gene3D G3DSA:3.90.550.10 12 206 2.0E-36 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_08425 6b7a5ae54cd3809f6e41d60a66b06cdd 208 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 12 202 19.25 T 23-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CDG62_09315 ed0f951ee3ce2cce3563e3dc986857aa 223 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 10 217 1.3E-63 T 23-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CDG62_09315 ed0f951ee3ce2cce3563e3dc986857aa 223 Gene3D G3DSA:3.30.70.260 127 198 1.1E-72 T 23-10-2018 CDG62_09315 ed0f951ee3ce2cce3563e3dc986857aa 223 SUPERFAMILY SSF75445 131 201 1.83E-22 T 23-10-2018 CDG62_09315 ed0f951ee3ce2cce3563e3dc986857aa 223 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 51 216 1.2E-58 T 23-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CDG62_09315 ed0f951ee3ce2cce3563e3dc986857aa 223 Gene3D G3DSA:3.40.50.1360 11 212 1.1E-72 T 23-10-2018 CDG62_09315 ed0f951ee3ce2cce3563e3dc986857aa 223 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 7 220 32.969 T 23-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 CDG62_09315 ed0f951ee3ce2cce3563e3dc986857aa 223 SUPERFAMILY SSF100950 7 149 5.02E-44 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG62_15415 82e842c7ca690acd44675db08d8cd13f 318 Gene3D G3DSA:3.40.50.720 27 316 1.3E-89 T 23-10-2018 CDG62_15415 82e842c7ca690acd44675db08d8cd13f 318 Gene3D G3DSA:3.40.50.720 97 287 1.3E-89 T 23-10-2018 CDG62_15415 82e842c7ca690acd44675db08d8cd13f 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 288 1.0E-50 T 23-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CDG62_15415 82e842c7ca690acd44675db08d8cd13f 318 SUPERFAMILY SSF52283 12 132 2.34E-22 T 23-10-2018 CDG62_15415 82e842c7ca690acd44675db08d8cd13f 318 SUPERFAMILY SSF51735 101 289 4.7E-47 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_15415 82e842c7ca690acd44675db08d8cd13f 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 25 313 7.3E-20 T 23-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 CDG62_12215 e66e88139f362971ff03bda14488f1e8 838 Gene3D G3DSA:2.170.130.10 164 297 1.5E-33 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_12215 e66e88139f362971ff03bda14488f1e8 838 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 189 837 8.9E-101 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDG62_12215 e66e88139f362971ff03bda14488f1e8 838 Pfam PF00593 TonB dependent receptor 401 836 2.4E-42 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_12215 e66e88139f362971ff03bda14488f1e8 838 Pfam PF07715 TonB-dependent Receptor Plug Domain 187 288 2.0E-13 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_12215 e66e88139f362971ff03bda14488f1e8 838 Gene3D G3DSA:2.40.170.20 298 838 4.4E-149 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_12215 e66e88139f362971ff03bda14488f1e8 838 Gene3D G3DSA:3.55.50.30 41 111 1.3E-13 T 23-10-2018 CDG62_12215 e66e88139f362971ff03bda14488f1e8 838 SMART SM00965 61 112 1.2E-6 T 23-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CDG62_12215 e66e88139f362971ff03bda14488f1e8 838 SUPERFAMILY SSF56935 146 838 1.17E-117 T 23-10-2018 CDG62_05935 9a3a4b632b3a01da02cc02faade6a3a9 547 Gene3D G3DSA:3.90.480.10 53 387 4.4E-74 T 23-10-2018 CDG62_05935 9a3a4b632b3a01da02cc02faade6a3a9 547 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 4.8E-40 T 23-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_05935 9a3a4b632b3a01da02cc02faade6a3a9 547 Gene3D G3DSA:3.30.413.10 406 547 1.4E-30 T 23-10-2018 CDG62_05935 9a3a4b632b3a01da02cc02faade6a3a9 547 SUPERFAMILY SSF56014 406 546 4.06E-38 T 23-10-2018 CDG62_05935 9a3a4b632b3a01da02cc02faade6a3a9 547 SUPERFAMILY SSF55124 253 419 2.29E-23 T 23-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_05935 9a3a4b632b3a01da02cc02faade6a3a9 547 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 110 2.7E-15 T 23-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_05935 9a3a4b632b3a01da02cc02faade6a3a9 547 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 328 396 8.0E-15 T 23-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_05935 9a3a4b632b3a01da02cc02faade6a3a9 547 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 408 544 1.1E-9 T 23-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_05935 9a3a4b632b3a01da02cc02faade6a3a9 547 SUPERFAMILY SSF56014 120 278 4.58E-42 T 23-10-2018 CDG62_05935 9a3a4b632b3a01da02cc02faade6a3a9 547 Gene3D G3DSA:3.30.413.10 119 315 4.4E-74 T 23-10-2018 CDG62_05935 9a3a4b632b3a01da02cc02faade6a3a9 547 SUPERFAMILY SSF55124 1 125 1.32E-28 T 23-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CDG62_04170 86ff5dd29ecb172f9ca956bfc7c7f811 842 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 74 745 1.2E-180 T 23-10-2018 CDG62_04170 86ff5dd29ecb172f9ca956bfc7c7f811 842 SUPERFAMILY SSF53955 54 260 9.0E-74 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG62_04170 86ff5dd29ecb172f9ca956bfc7c7f811 842 Gene3D G3DSA:2.40.50.140 322 416 1.3E-26 T 23-10-2018 CDG62_04170 86ff5dd29ecb172f9ca956bfc7c7f811 842 Gene3D G3DSA:1.10.3810.10 55 251 2.3E-73 T 23-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_04170 86ff5dd29ecb172f9ca956bfc7c7f811 842 Pfam PF00912 Transglycosylase 62 235 7.8E-61 T 23-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_04170 86ff5dd29ecb172f9ca956bfc7c7f811 842 Pfam PF17092 Penicillin-binding protein OB-like domain 325 419 1.3E-18 T 23-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_04170 86ff5dd29ecb172f9ca956bfc7c7f811 842 Pfam PF00905 Penicillin binding protein transpeptidase domain 424 597 1.8E-24 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDG62_04170 86ff5dd29ecb172f9ca956bfc7c7f811 842 SUPERFAMILY SSF56601 217 762 1.29E-122 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG62_11585 cfd17226f7449f18e102a72f114e5671 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.3E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11585 cfd17226f7449f18e102a72f114e5671 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.3E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11585 cfd17226f7449f18e102a72f114e5671 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.3E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11585 cfd17226f7449f18e102a72f114e5671 253 Pfam PF00106 short chain dehydrogenase 5 195 5.5E-41 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11585 cfd17226f7449f18e102a72f114e5671 253 Gene3D G3DSA:3.40.50.720 2 244 6.2E-50 T 23-10-2018 CDG62_11585 cfd17226f7449f18e102a72f114e5671 253 SUPERFAMILY SSF51735 2 229 2.8E-49 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_11585 cfd17226f7449f18e102a72f114e5671 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.3E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11585 cfd17226f7449f18e102a72f114e5671 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.3E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11585 cfd17226f7449f18e102a72f114e5671 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.3E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11585 cfd17226f7449f18e102a72f114e5671 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.3E-15 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11140 4f90f0ea0ecb3477bf6fb59fe4094e9f 411 Gene3D G3DSA:2.40.50.100 107 246 6.1E-67 T 23-10-2018 CDG62_11140 4f90f0ea0ecb3477bf6fb59fe4094e9f 411 SUPERFAMILY SSF111369 104 324 9.81E-24 T 23-10-2018 CDG62_11140 4f90f0ea0ecb3477bf6fb59fe4094e9f 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 83 399 1.8E-43 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG62_11140 4f90f0ea0ecb3477bf6fb59fe4094e9f 411 Gene3D G3DSA:2.40.420.20 81 391 6.1E-67 T 23-10-2018 CDG62_11140 4f90f0ea0ecb3477bf6fb59fe4094e9f 411 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 93 319 2.7E-32 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG62_11140 4f90f0ea0ecb3477bf6fb59fe4094e9f 411 Gene3D G3DSA:2.40.30.170 93 326 6.1E-67 T 23-10-2018 CDG62_11140 4f90f0ea0ecb3477bf6fb59fe4094e9f 411 Gene3D G3DSA:1.10.287.470 141 211 6.1E-67 T 23-10-2018 CDG62_07440 7b426e4c8c7e958da0cdab11aa44878b 164 SUPERFAMILY SSF54909 82 161 2.01E-15 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_07440 7b426e4c8c7e958da0cdab11aa44878b 164 SMART SM00344 12 121 1.5E-40 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG62_07440 7b426e4c8c7e958da0cdab11aa44878b 164 Pfam PF01037 Lrp/AsnC ligand binding domain 84 146 2.7E-17 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG62_07440 7b426e4c8c7e958da0cdab11aa44878b 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 3.8E-17 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_07440 7b426e4c8c7e958da0cdab11aa44878b 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 3.8E-17 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_07440 7b426e4c8c7e958da0cdab11aa44878b 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 3.8E-17 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_07440 7b426e4c8c7e958da0cdab11aa44878b 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-18 T 23-10-2018 CDG62_07440 7b426e4c8c7e958da0cdab11aa44878b 164 SUPERFAMILY SSF46785 11 71 2.53E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_07440 7b426e4c8c7e958da0cdab11aa44878b 164 Gene3D G3DSA:1.10.10.10 1 65 8.0E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_07440 7b426e4c8c7e958da0cdab11aa44878b 164 Gene3D G3DSA:3.30.70.920 66 148 1.7E-22 T 23-10-2018 CDG62_12205 d48b75fb08d3cb90ec306f4bb776a084 171 Gene3D G3DSA:1.10.1740.10 2 77 5.3E-14 T 23-10-2018 CDG62_12205 d48b75fb08d3cb90ec306f4bb776a084 171 SUPERFAMILY SSF88946 9 98 3.88E-16 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDG62_12205 d48b75fb08d3cb90ec306f4bb776a084 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 159 9.4E-20 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDG62_12205 d48b75fb08d3cb90ec306f4bb776a084 171 Pfam PF08281 Sigma-70, region 4 112 163 6.5E-15 T 23-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG62_12205 d48b75fb08d3cb90ec306f4bb776a084 171 Gene3D G3DSA:1.10.10.10 106 163 2.9E-11 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_12205 d48b75fb08d3cb90ec306f4bb776a084 171 SUPERFAMILY SSF88659 89 163 2.83E-12 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDG62_12205 d48b75fb08d3cb90ec306f4bb776a084 171 Pfam PF04542 Sigma-70 region 2 15 79 2.0E-11 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDG62_10355 f77975184d6b29378908243241211b78 216 Pfam PF01810 LysE type translocator 17 214 1.7E-35 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_10355 f77975184d6b29378908243241211b78 216 PIRSF PIRSF006324 4 216 2.7E-44 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_10125 531ba74006c944944d445cdc30918f22 295 Gene3D G3DSA:3.90.1530.30 52 117 2.8E-28 T 23-10-2018 CDG62_10125 531ba74006c944944d445cdc30918f22 295 Pfam PF02195 ParB-like nuclease domain 40 131 1.1E-27 T 23-10-2018 IPR003115 ParB/Sulfiredoxin CDG62_10125 531ba74006c944944d445cdc30918f22 295 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 212 1.1E-57 T 23-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CDG62_10125 531ba74006c944944d445cdc30918f22 295 Gene3D G3DSA:1.10.10.2830 118 231 1.9E-35 T 23-10-2018 CDG62_10125 531ba74006c944944d445cdc30918f22 295 SMART SM00470 39 131 3.1E-33 T 23-10-2018 IPR003115 ParB/Sulfiredoxin CDG62_10125 531ba74006c944944d445cdc30918f22 295 SUPERFAMILY SSF109709 124 232 4.97E-34 T 23-10-2018 CDG62_10125 531ba74006c944944d445cdc30918f22 295 SUPERFAMILY SSF110849 39 133 1.18E-28 T 23-10-2018 IPR036086 ParB/Sulfiredoxin superfamily CDG62_05980 16b9f2f6106cc1ec247e9449170aac45 456 TIGRFAM TIGR03173 pbuX: xanthine permease 33 452 1.0E-126 T 23-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 CDG62_05980 16b9f2f6106cc1ec247e9449170aac45 456 Pfam PF00860 Permease family 30 420 2.6E-96 T 23-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CDG62_05980 16b9f2f6106cc1ec247e9449170aac45 456 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 450 6.2E-121 T 23-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CDG62_05980 16b9f2f6106cc1ec247e9449170aac45 456 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 368 388 - T 23-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CDG62_04460 d33a44ce09a743b5b54a34247ad4ee68 110 Gene3D G3DSA:3.20.160.10 1 110 8.0E-44 T 23-10-2018 IPR038604 Type III effector HopJ superfamily CDG62_04460 d33a44ce09a743b5b54a34247ad4ee68 110 Pfam PF08888 HopJ type III effector protein 5 107 1.7E-40 T 23-10-2018 IPR014984 HopJ type III effector protein CDG62_18450 b6a0226a414acf9b09d69270f5534006 181 PRINTS PR01011 Glutathione peroxidase family signature 23 40 3.0E-18 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_18450 b6a0226a414acf9b09d69270f5534006 181 PRINTS PR01011 Glutathione peroxidase family signature 141 150 3.0E-18 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_18450 b6a0226a414acf9b09d69270f5534006 181 PRINTS PR01011 Glutathione peroxidase family signature 58 74 3.0E-18 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_18450 b6a0226a414acf9b09d69270f5534006 181 Pfam PF00255 Glutathione peroxidase 5 111 1.2E-39 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_18450 b6a0226a414acf9b09d69270f5534006 181 Gene3D G3DSA:3.40.30.10 1 181 1.1E-61 T 23-10-2018 CDG62_18450 b6a0226a414acf9b09d69270f5534006 181 SUPERFAMILY SSF52833 4 180 1.29E-54 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_18450 b6a0226a414acf9b09d69270f5534006 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 23-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CDG62_18450 b6a0226a414acf9b09d69270f5534006 181 PIRSF PIRSF000303 1 181 3.3E-61 T 23-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CDG62_05385 1450f5f0038694abe37ef9fa1b9a3e68 346 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 44.039 T 23-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CDG62_05385 1450f5f0038694abe37ef9fa1b9a3e68 346 Gene3D G3DSA:2.40.10.240 63 159 2.0E-111 T 23-10-2018 CDG62_05385 1450f5f0038694abe37ef9fa1b9a3e68 346 SUPERFAMILY SSF111337 1 340 9.94E-124 T 23-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CDG62_05385 1450f5f0038694abe37ef9fa1b9a3e68 346 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 7.9E-131 T 23-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CDG62_05385 1450f5f0038694abe37ef9fa1b9a3e68 346 Pfam PF02547 Queuosine biosynthesis protein 3 340 2.2E-124 T 23-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CDG62_05385 1450f5f0038694abe37ef9fa1b9a3e68 346 Gene3D G3DSA:3.40.1780.10 14 340 2.0E-111 T 23-10-2018 CDG62_04270 25ee14d431b51a8495a213ca3fe4dea0 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 23-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 CDG62_04270 25ee14d431b51a8495a213ca3fe4dea0 127 Pfam PF01042 Endoribonuclease L-PSP 8 124 1.7E-37 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CDG62_04270 25ee14d431b51a8495a213ca3fe4dea0 127 Gene3D G3DSA:3.30.1330.40 3 126 3.1E-50 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG62_04270 25ee14d431b51a8495a213ca3fe4dea0 127 SUPERFAMILY SSF55298 1 126 2.51E-44 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG62_04270 25ee14d431b51a8495a213ca3fe4dea0 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 124 4.1E-48 T 23-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 CDG62_11180 cc588de7656274b24cc41e244e24438d 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.4E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_11180 cc588de7656274b24cc41e244e24438d 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.4E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_11180 cc588de7656274b24cc41e244e24438d 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.4E-11 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_11180 cc588de7656274b24cc41e244e24438d 304 Gene3D G3DSA:3.40.190.10 162 267 1.1E-78 T 23-10-2018 CDG62_11180 cc588de7656274b24cc41e244e24438d 304 Pfam PF03466 LysR substrate binding domain 89 288 1.0E-37 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_11180 cc588de7656274b24cc41e244e24438d 304 Gene3D G3DSA:3.40.190.10 93 292 1.1E-78 T 23-10-2018 CDG62_11180 cc588de7656274b24cc41e244e24438d 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-22 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_11180 cc588de7656274b24cc41e244e24438d 304 SUPERFAMILY SSF46785 1 83 1.63E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_11180 cc588de7656274b24cc41e244e24438d 304 SUPERFAMILY SSF53850 89 292 8.15E-34 T 23-10-2018 CDG62_11180 cc588de7656274b24cc41e244e24438d 304 Gene3D G3DSA:1.10.10.10 1 91 7.9E-34 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_10345 d1b2179d64e6c66b96e1f67e277ded06 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.6E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_10345 d1b2179d64e6c66b96e1f67e277ded06 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.6E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_10345 d1b2179d64e6c66b96e1f67e277ded06 185 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 61 - T 23-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDG62_10345 d1b2179d64e6c66b96e1f67e277ded06 185 SUPERFAMILY SSF48498 108 172 2.4E-10 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG62_10345 d1b2179d64e6c66b96e1f67e277ded06 185 Gene3D G3DSA:1.10.357.10 12 185 1.9E-34 T 23-10-2018 CDG62_10345 d1b2179d64e6c66b96e1f67e277ded06 185 SUPERFAMILY SSF46689 5 85 5.99E-18 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_10345 d1b2179d64e6c66b96e1f67e277ded06 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 4.2E-14 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_08990 07b5226b3574c6759c7f4162d477401a 242 Pfam PF00696 Amino acid kinase family 11 220 1.5E-23 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDG62_08990 07b5226b3574c6759c7f4162d477401a 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 241 41.321 T 23-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CDG62_08990 07b5226b3574c6759c7f4162d477401a 242 PIRSF PIRSF005650 4 242 1.9E-84 T 23-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CDG62_08990 07b5226b3574c6759c7f4162d477401a 242 SUPERFAMILY SSF53633 8 240 8.38E-63 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG62_08990 07b5226b3574c6759c7f4162d477401a 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 10 240 1.7E-93 T 23-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CDG62_08990 07b5226b3574c6759c7f4162d477401a 242 Gene3D G3DSA:3.40.1160.10 3 242 2.3E-66 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG62_04660 0e34193901729ee9f0c4861661a6f87a 402 SUPERFAMILY SSF46458 1 143 1.51E-34 T 23-10-2018 IPR009050 Globin-like superfamily CDG62_04660 0e34193901729ee9f0c4861661a6f87a 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 184 196 8.1E-10 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_04660 0e34193901729ee9f0c4861661a6f87a 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 363 371 8.1E-10 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_04660 0e34193901729ee9f0c4861661a6f87a 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 268 287 8.1E-10 T 23-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CDG62_04660 0e34193901729ee9f0c4861661a6f87a 402 Pfam PF00042 Globin 5 101 1.9E-7 T 23-10-2018 IPR000971 Globin GO:0020037 CDG62_04660 0e34193901729ee9f0c4861661a6f87a 402 Gene3D G3DSA:2.40.30.10 150 259 7.5E-34 T 23-10-2018 CDG62_04660 0e34193901729ee9f0c4861661a6f87a 402 Pfam PF00970 Oxidoreductase FAD-binding domain 157 259 2.1E-7 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG62_04660 0e34193901729ee9f0c4861661a6f87a 402 Gene3D G3DSA:3.40.50.80 261 399 3.9E-32 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_04660 0e34193901729ee9f0c4861661a6f87a 402 SUPERFAMILY SSF52343 259 399 3.14E-35 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_04660 0e34193901729ee9f0c4861661a6f87a 402 Gene3D G3DSA:1.10.490.10 1 143 4.4E-48 T 23-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 CDG62_04660 0e34193901729ee9f0c4861661a6f87a 402 SUPERFAMILY SSF63380 150 260 2.94E-26 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG62_04660 0e34193901729ee9f0c4861661a6f87a 402 Pfam PF00175 Oxidoreductase NAD-binding domain 269 376 1.8E-14 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG62_16105 daef1e6f1dc5dbceb2307473a5460e10 221 SUPERFAMILY SSF53067 111 206 3.37E-14 T 23-10-2018 CDG62_16105 daef1e6f1dc5dbceb2307473a5460e10 221 Gene3D G3DSA:3.30.420.40 3 208 2.3E-54 T 23-10-2018 CDG62_16105 daef1e6f1dc5dbceb2307473a5460e10 221 SUPERFAMILY SSF53067 3 107 4.32E-22 T 23-10-2018 CDG62_16105 daef1e6f1dc5dbceb2307473a5460e10 221 Pfam PF00814 Glycoprotease family 33 141 6.8E-22 T 23-10-2018 IPR000905 Gcp-like domain CDG62_16105 daef1e6f1dc5dbceb2307473a5460e10 221 Gene3D G3DSA:3.30.420.40 95 177 2.3E-54 T 23-10-2018 CDG62_16105 daef1e6f1dc5dbceb2307473a5460e10 221 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 208 1.2E-47 T 23-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 CDG62_08290 9192e4380dc2577c295340e78f7a5217 479 Pfam PF01435 Peptidase family M48 71 255 1.5E-33 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDG62_08290 9192e4380dc2577c295340e78f7a5217 479 SUPERFAMILY SSF48452 298 457 1.59E-14 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_08290 9192e4380dc2577c295340e78f7a5217 479 Gene3D G3DSA:1.25.40.10 251 476 2.5E-14 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_08290 9192e4380dc2577c295340e78f7a5217 479 Pfam PF14559 Tetratricopeptide repeat 345 411 6.0E-8 T 23-10-2018 CDG62_08290 9192e4380dc2577c295340e78f7a5217 479 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 7 477 31.389 T 23-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 CDG62_08290 9192e4380dc2577c295340e78f7a5217 479 Gene3D G3DSA:3.30.2010.10 59 147 9.2E-8 T 23-10-2018 CDG62_13420 f1994f7d695511e2f07de3a0fc5e02f3 247 SMART SM00345 7 66 6.2E-18 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_13420 f1994f7d695511e2f07de3a0fc5e02f3 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 65 1.1E-16 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_13420 f1994f7d695511e2f07de3a0fc5e02f3 247 Gene3D G3DSA:1.10.10.10 1 66 5.7E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_13420 f1994f7d695511e2f07de3a0fc5e02f3 247 SUPERFAMILY SSF46785 3 84 2.02E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_13420 f1994f7d695511e2f07de3a0fc5e02f3 247 SUPERFAMILY SSF48008 94 228 5.23E-27 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG62_13420 f1994f7d695511e2f07de3a0fc5e02f3 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 3.3E-9 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_13420 f1994f7d695511e2f07de3a0fc5e02f3 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 3.3E-9 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_13420 f1994f7d695511e2f07de3a0fc5e02f3 247 Pfam PF07729 FCD domain 96 222 1.7E-23 T 23-10-2018 IPR011711 GntR, C-terminal CDG62_13420 f1994f7d695511e2f07de3a0fc5e02f3 247 SMART SM00895 95 223 1.2E-19 T 23-10-2018 IPR011711 GntR, C-terminal CDG62_13420 f1994f7d695511e2f07de3a0fc5e02f3 247 Gene3D G3DSA:1.20.120.530 94 229 4.2E-29 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG62_13005 59338fa93ff4bf25ca7ef3bff475b25c 104 Gene3D G3DSA:3.30.70.120 1 103 1.9E-39 T 23-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDG62_13005 59338fa93ff4bf25ca7ef3bff475b25c 104 SUPERFAMILY SSF102705 2 101 2.94E-23 T 23-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CDG62_19235 9fbd66c509b33cd9d280f4440799e712 451 Gene3D G3DSA:3.40.50.300 217 379 7.6E-103 T 23-10-2018 CDG62_19235 9fbd66c509b33cd9d280f4440799e712 451 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 451 2.7E-105 T 23-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CDG62_19235 9fbd66c509b33cd9d280f4440799e712 451 SUPERFAMILY SSF116878 121 451 7.19E-50 T 23-10-2018 CDG62_19235 9fbd66c509b33cd9d280f4440799e712 451 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 451 32.431 T 23-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CDG62_19235 9fbd66c509b33cd9d280f4440799e712 451 Gene3D G3DSA:3.30.1360.120 1 121 1.4E-39 T 23-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CDG62_19235 9fbd66c509b33cd9d280f4440799e712 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 218 370 1.2E-21 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG62_19235 9fbd66c509b33cd9d280f4440799e712 451 SUPERFAMILY SSF52540 73 370 2.92E-43 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_19235 9fbd66c509b33cd9d280f4440799e712 451 Pfam PF12631 MnmE helical domain 123 448 5.1E-56 T 23-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 CDG62_19235 9fbd66c509b33cd9d280f4440799e712 451 Pfam PF01926 50S ribosome-binding GTPase 218 312 1.5E-23 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_19235 9fbd66c509b33cd9d280f4440799e712 451 Gene3D G3DSA:1.20.120.430 122 451 7.6E-103 T 23-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 CDG62_19235 9fbd66c509b33cd9d280f4440799e712 451 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 1.3E-35 T 23-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 CDG62_19235 9fbd66c509b33cd9d280f4440799e712 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 6.5E-6 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_19235 9fbd66c509b33cd9d280f4440799e712 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 286 304 6.5E-6 T 23-10-2018 IPR006073 GTP binding domain GO:0005525 CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 PIRSF PIRSF000185 21 447 4.0E-113 T 23-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 SMART SM00839 203 445 5.3E-87 T 23-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 Gene3D G3DSA:3.40.50.720 208 372 5.4E-168 T 23-10-2018 CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 56 183 2.3E-48 T 23-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 121 134 - T 23-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 445 2.6E-86 T 23-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 SUPERFAMILY SSF51735 201 446 9.17E-76 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 Gene3D G3DSA:3.40.50.10860 54 189 5.4E-168 T 23-10-2018 CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 113 127 8.2E-32 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 8.2E-32 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 371 382 8.2E-32 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 8.2E-32 T 23-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 Gene3D G3DSA:1.10.285.10 384 447 8.8E-12 T 23-10-2018 CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 SUPERFAMILY SSF53223 6 195 1.28E-73 T 23-10-2018 CDG62_13895 abf06d234ba21e4273c50cb595b2fdb8 447 Gene3D G3DSA:1.10.285.10 7 383 5.4E-168 T 23-10-2018 CDG62_18875 4f5d8259183928909b2002454d5da49e 389 Gene3D G3DSA:3.90.1150.10 257 388 1.5E-16 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_18875 4f5d8259183928909b2002454d5da49e 389 PIRSF PIRSF000390 1 389 3.3E-118 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDG62_18875 4f5d8259183928909b2002454d5da49e 389 Gene3D G3DSA:3.40.640.10 5 256 1.4E-85 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_18875 4f5d8259183928909b2002454d5da49e 389 SUPERFAMILY SSF53383 9 386 3.03E-105 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_18875 4f5d8259183928909b2002454d5da49e 389 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 382 1.5E-95 T 23-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDG62_15360 ea1ba9dabc92f31ccd0e509abf6458e8 158 Pfam PF05229 Spore Coat Protein U domain 31 155 1.5E-22 T 23-10-2018 IPR007893 Spore coat protein U CDG62_15360 ea1ba9dabc92f31ccd0e509abf6458e8 158 SMART SM00972 99 155 1.1E-10 T 23-10-2018 IPR007893 Spore coat protein U CDG62_06860 379e01e7362432ca74ebb5c7aef0544c 87 Gene3D G3DSA:3.30.70.20 2 83 1.5E-31 T 23-10-2018 CDG62_06860 379e01e7362432ca74ebb5c7aef0544c 87 SUPERFAMILY SSF54862 4 76 7.33E-19 T 23-10-2018 CDG62_06860 379e01e7362432ca74ebb5c7aef0544c 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG62_06860 379e01e7362432ca74ebb5c7aef0544c 87 Pfam PF00037 4Fe-4S binding domain 5 24 1.9E-6 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG62_10085 790ef3c6354467bad90cc0abe256b5aa 314 SUPERFAMILY SSF52540 6 232 1.16E-5 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10085 790ef3c6354467bad90cc0abe256b5aa 314 Gene3D G3DSA:3.40.50.300 11 296 3.7E-91 T 23-10-2018 CDG62_10085 790ef3c6354467bad90cc0abe256b5aa 314 Gene3D G3DSA:1.10.20.140 114 186 3.7E-91 T 23-10-2018 CDG62_10085 790ef3c6354467bad90cc0abe256b5aa 314 SUPERFAMILY SSF52540 8 139 1.66E-15 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10085 790ef3c6354467bad90cc0abe256b5aa 314 Pfam PF01715 IPP transferase 41 293 1.0E-77 T 23-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CDG62_10085 790ef3c6354467bad90cc0abe256b5aa 314 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 296 6.4E-89 T 23-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CDG62_10085 790ef3c6354467bad90cc0abe256b5aa 314 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 307 28.842 T 23-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CDG62_10450 45a51e0fd49d3ad03671716a141bf92b 632 Gene3D G3DSA:3.30.565.10 502 624 1.5E-20 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_10450 45a51e0fd49d3ad03671716a141bf92b 632 Pfam PF07695 7TM diverse intracellular signalling 198 384 1.4E-11 T 23-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 CDG62_10450 45a51e0fd49d3ad03671716a141bf92b 632 SUPERFAMILY SSF55874 501 616 8.12E-12 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_10450 45a51e0fd49d3ad03671716a141bf92b 632 SMART SM00387 532 627 2.8E-6 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_11320 7838f6ebdc9dee999d30fb484d919616 127 SUPERFAMILY SSF55298 2 126 2.36E-37 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG62_11320 7838f6ebdc9dee999d30fb484d919616 127 Pfam PF01042 Endoribonuclease L-PSP 13 125 7.0E-32 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CDG62_11320 7838f6ebdc9dee999d30fb484d919616 127 Gene3D G3DSA:3.30.1330.40 1 127 1.7E-42 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG62_11320 7838f6ebdc9dee999d30fb484d919616 127 TIGRFAM TIGR03610 RutC: pyrimidine utilization protein C 1 127 1.0E-74 T 23-10-2018 IPR019898 Putative aminoacrylate peracid reductase RutC CDG62_11320 7838f6ebdc9dee999d30fb484d919616 127 Hamap MF_00831 Putative aminoacrylate peracid reductase RutC [rutC]. 1 127 43.051 T 23-10-2018 IPR019898 Putative aminoacrylate peracid reductase RutC CDG62_08220 6a41fc5719169d0cbafffba088315fdb 70 PIRSF PIRSF002599 1 70 2.5E-22 T 23-10-2018 IPR012156 Cold shock, CspA GO:0003676 CDG62_08220 6a41fc5719169d0cbafffba088315fdb 70 PRINTS PR00050 Cold shock protein signature 7 22 6.9E-18 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG62_08220 6a41fc5719169d0cbafffba088315fdb 70 PRINTS PR00050 Cold shock protein signature 27 36 6.9E-18 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG62_08220 6a41fc5719169d0cbafffba088315fdb 70 PRINTS PR00050 Cold shock protein signature 42 60 6.9E-18 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG62_08220 6a41fc5719169d0cbafffba088315fdb 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 23-10-2018 IPR019844 Cold-shock conserved site CDG62_08220 6a41fc5719169d0cbafffba088315fdb 70 SUPERFAMILY SSF50249 2 69 2.36E-24 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_08220 6a41fc5719169d0cbafffba088315fdb 70 Gene3D G3DSA:2.40.50.140 1 70 1.9E-27 T 23-10-2018 CDG62_08220 6a41fc5719169d0cbafffba088315fdb 70 SMART SM00357 6 69 3.0E-28 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 CDG62_08220 6a41fc5719169d0cbafffba088315fdb 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 5.8E-28 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG62_04685 eec9528e328ae869e5d1231087a143f1 246 Gene3D G3DSA:3.40.50.880 5 243 2.7E-52 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_04685 eec9528e328ae869e5d1231087a143f1 246 Pfam PF00117 Glutamine amidotransferase class-I 41 192 1.6E-16 T 23-10-2018 IPR017926 Glutamine amidotransferase CDG62_04685 eec9528e328ae869e5d1231087a143f1 246 SUPERFAMILY SSF52317 43 206 3.06E-41 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_04685 eec9528e328ae869e5d1231087a143f1 246 PRINTS PR00097 Anthranilate synthase component II signature 94 105 4.2E-5 T 23-10-2018 CDG62_04685 eec9528e328ae869e5d1231087a143f1 246 PRINTS PR00097 Anthranilate synthase component II signature 181 194 4.2E-5 T 23-10-2018 CDG62_04685 eec9528e328ae869e5d1231087a143f1 246 PRINTS PR00097 Anthranilate synthase component II signature 140 152 4.2E-5 T 23-10-2018 CDG62_13470 62ebff5e284d19e5f1cf540b84300ab8 342 SUPERFAMILY SSF53474 195 304 8.19E-10 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_13470 62ebff5e284d19e5f1cf540b84300ab8 342 Gene3D G3DSA:3.40.50.1820 175 338 4.4E-6 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_08235 860bae9204eecb493fa6f18bdf1c24b6 191 Gene3D G3DSA:3.40.109.10 9 189 1.1E-33 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG62_08235 860bae9204eecb493fa6f18bdf1c24b6 191 PIRSF PIRSF000232 5 191 7.9E-60 T 23-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CDG62_08235 860bae9204eecb493fa6f18bdf1c24b6 191 Pfam PF00881 Nitroreductase family 15 168 1.9E-21 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDG62_08235 860bae9204eecb493fa6f18bdf1c24b6 191 SUPERFAMILY SSF55469 10 188 2.36E-29 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG62_05650 75101a2af502289901bdc7b7c0068d5c 427 Gene3D G3DSA:3.40.1190.10 2 288 5.4E-90 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG62_05650 75101a2af502289901bdc7b7c0068d5c 427 Gene3D G3DSA:3.90.190.20 290 424 1.7E-26 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG62_05650 75101a2af502289901bdc7b7c0068d5c 427 SUPERFAMILY SSF53244 290 424 5.13E-24 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG62_05650 75101a2af502289901bdc7b7c0068d5c 427 SUPERFAMILY SSF53623 11 286 9.27E-85 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG62_05650 75101a2af502289901bdc7b7c0068d5c 427 Pfam PF08245 Mur ligase middle domain 52 266 3.9E-15 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDG62_05650 75101a2af502289901bdc7b7c0068d5c 427 PIRSF PIRSF001563 4 427 2.8E-108 T 23-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CDG62_05650 75101a2af502289901bdc7b7c0068d5c 427 TIGRFAM TIGR01499 folC: bifunctional protein FolC 30 422 9.2E-104 T 23-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 Gene3D G3DSA:3.30.2090.10 179 269 6.6E-290 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 SUPERFAMILY SSF82866 818 1015 3.92E-44 T 23-10-2018 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.4E-75 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.4E-75 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 5.4E-75 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.4E-75 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 5.4E-75 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.4E-75 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 5.4E-75 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 5.4E-75 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 5.4E-75 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 SUPERFAMILY SSF82693 557 653 2.56E-13 T 23-10-2018 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 SUPERFAMILY SSF82714 708 790 8.24E-17 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 Pfam PF00873 AcrB/AcrD/AcrF family 3 1013 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 Gene3D G3DSA:3.30.70.1440 654 852 6.6E-290 T 23-10-2018 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 Gene3D G3DSA:1.20.1640.10 10 507 6.6E-290 T 23-10-2018 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 SUPERFAMILY SSF82714 183 266 4.19E-17 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 SUPERFAMILY SSF82693 669 840 1.73E-6 T 23-10-2018 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 Gene3D G3DSA:3.30.70.1320 133 326 6.6E-290 T 23-10-2018 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 Gene3D G3DSA:1.20.1640.10 508 1010 6.6E-290 T 23-10-2018 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 Gene3D G3DSA:3.30.70.1430 559 653 6.6E-290 T 23-10-2018 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 SUPERFAMILY SSF82866 291 491 2.49E-49 T 23-10-2018 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 Gene3D G3DSA:3.30.70.1430 40 802 6.6E-290 T 23-10-2018 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 Gene3D G3DSA:3.30.2090.10 706 794 6.6E-290 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 SUPERFAMILY SSF82693 136 324 2.79E-23 T 23-10-2018 CDG62_12195 14c31125b3bf6157a039f76c1f0cad35 1037 SUPERFAMILY SSF82693 40 131 1.26E-21 T 23-10-2018 CDG62_18035 5a528b3c3fb4ebd98cf8c5b8fc3a531d 142 Gene3D G3DSA:3.10.129.10 2 137 6.3E-41 T 23-10-2018 CDG62_18035 5a528b3c3fb4ebd98cf8c5b8fc3a531d 142 Pfam PF13279 Thioesterase-like superfamily 15 130 2.2E-19 T 23-10-2018 CDG62_18035 5a528b3c3fb4ebd98cf8c5b8fc3a531d 142 SUPERFAMILY SSF54637 6 133 2.05E-34 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_18035 5a528b3c3fb4ebd98cf8c5b8fc3a531d 142 PIRSF PIRSF003230 6 138 1.2E-19 T 23-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CDG62_12925 7f2a636debf76057fb967fcb433c39f2 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.8E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_12925 7f2a636debf76057fb967fcb433c39f2 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.6E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_12925 7f2a636debf76057fb967fcb433c39f2 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.6E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_12925 7f2a636debf76057fb967fcb433c39f2 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.6E-7 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_12925 7f2a636debf76057fb967fcb433c39f2 307 SUPERFAMILY SSF53850 92 290 1.96E-38 T 23-10-2018 CDG62_12925 7f2a636debf76057fb967fcb433c39f2 307 Gene3D G3DSA:3.40.190.10 91 300 6.4E-83 T 23-10-2018 CDG62_12925 7f2a636debf76057fb967fcb433c39f2 307 Gene3D G3DSA:1.10.10.10 1 86 6.8E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_12925 7f2a636debf76057fb967fcb433c39f2 307 Pfam PF03466 LysR substrate binding domain 91 279 1.3E-38 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_12925 7f2a636debf76057fb967fcb433c39f2 307 SUPERFAMILY SSF46785 2 113 4.22E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_12925 7f2a636debf76057fb967fcb433c39f2 307 Gene3D G3DSA:3.40.190.10 167 266 6.4E-83 T 23-10-2018 CDG62_13745 cb3a3d6c15322a0c46c4276d42e20bb3 204 Gene3D G3DSA:1.10.357.10 4 204 4.3E-36 T 23-10-2018 CDG62_13745 cb3a3d6c15322a0c46c4276d42e20bb3 204 SUPERFAMILY SSF46689 6 73 1.39E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_13745 cb3a3d6c15322a0c46c4276d42e20bb3 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 44 5.1E-9 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_09775 5fdc70973aba6a508022b02416e2e157 431 Gene3D G3DSA:3.30.70.270 10 166 1.7E-38 T 23-10-2018 CDG62_09775 5fdc70973aba6a508022b02416e2e157 431 Gene3D G3DSA:1.10.150.20 178 239 1.1E-7 T 23-10-2018 CDG62_09775 5fdc70973aba6a508022b02416e2e157 431 Pfam PF13438 Domain of unknown function (DUF4113) 380 430 2.2E-15 T 23-10-2018 IPR025188 Domain of unknown function DUF4113 CDG62_09775 5fdc70973aba6a508022b02416e2e157 431 Gene3D G3DSA:2.30.40.20 16 79 1.7E-38 T 23-10-2018 CDG62_09775 5fdc70973aba6a508022b02416e2e157 431 Pfam PF00817 impB/mucB/samB family 11 158 1.4E-30 T 23-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG62_09775 5fdc70973aba6a508022b02416e2e157 431 Pfam PF11799 impB/mucB/samB family C-terminal domain 251 362 2.1E-11 T 23-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CDG62_09775 5fdc70973aba6a508022b02416e2e157 431 SUPERFAMILY SSF56672 6 246 1.16E-63 T 23-10-2018 CDG62_17520 b5f4e595b4cc4e349dbd261fe47f2498 411 Gene3D G3DSA:1.20.58.340 285 361 8.1E-26 T 23-10-2018 CDG62_17520 b5f4e595b4cc4e349dbd261fe47f2498 411 Pfam PF01544 CorA-like Mg2+ transporter protein 58 358 1.6E-41 T 23-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CDG62_17520 b5f4e595b4cc4e349dbd261fe47f2498 411 SUPERFAMILY SSF144083 297 359 1.44E-19 T 23-10-2018 CDG62_17520 b5f4e595b4cc4e349dbd261fe47f2498 411 SUPERFAMILY SSF143865 44 295 2.09E-14 T 23-10-2018 CDG62_06675 4b03da215c5b3dcaa0bb1c286669a667 464 Pfam PF00324 Amino acid permease 21 382 2.2E-36 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG62_06675 4b03da215c5b3dcaa0bb1c286669a667 464 Gene3D G3DSA:1.20.1740.10 12 459 1.8E-71 T 23-10-2018 CDG62_06675 4b03da215c5b3dcaa0bb1c286669a667 464 PIRSF PIRSF006060 2 464 2.0E-62 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_11345 74f3cd1b2c8cde617c40811ded5be9fe 577 Gene3D G3DSA:3.30.750.24 437 571 3.4E-28 T 23-10-2018 IPR036513 STAS domain superfamily CDG62_11345 74f3cd1b2c8cde617c40811ded5be9fe 577 Pfam PF01740 STAS domain 459 565 9.2E-19 T 23-10-2018 IPR002645 STAS domain CDG62_11345 74f3cd1b2c8cde617c40811ded5be9fe 577 SUPERFAMILY SSF52091 457 569 5.69E-17 T 23-10-2018 IPR036513 STAS domain superfamily CDG62_11345 74f3cd1b2c8cde617c40811ded5be9fe 577 Pfam PF00916 Sulfate permease family 26 407 1.3E-98 T 23-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CDG62_11345 74f3cd1b2c8cde617c40811ded5be9fe 577 TIGRFAM TIGR00815 sulP: sulfate permease 13 553 1.4E-129 T 23-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 CDG62_09860 b7ecf2d4b70dee5041cd899a9cf895b4 131 Pfam PF11342 Protein of unknown function (DUF3144) 20 105 9.2E-30 T 23-10-2018 IPR021490 Protein of unknown function DUF3144 CDG62_17160 83ce3c20bd0475da9fe487916bccf5b2 216 Gene3D G3DSA:3.20.19.10 1 184 5.4E-76 T 23-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CDG62_17160 83ce3c20bd0475da9fe487916bccf5b2 216 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 7.5E-84 T 23-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CDG62_17160 83ce3c20bd0475da9fe487916bccf5b2 216 Pfam PF00694 Aconitase C-terminal domain 1 132 8.7E-38 T 23-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 CDG62_17160 83ce3c20bd0475da9fe487916bccf5b2 216 SUPERFAMILY SSF52016 1 201 3.34E-60 T 23-10-2018 CDG62_17160 83ce3c20bd0475da9fe487916bccf5b2 216 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 42.899 T 23-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CDG62_12150 f6a5f101e233a13671b6cd073f735452 640 Pfam PF00005 ABC transporter 29 172 1.1E-30 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_12150 f6a5f101e233a13671b6cd073f735452 640 SUPERFAMILY SSF52540 21 234 3.39E-54 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12150 f6a5f101e233a13671b6cd073f735452 640 SMART SM00382 416 595 7.7E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_12150 f6a5f101e233a13671b6cd073f735452 640 SMART SM00382 38 288 1.2E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_12150 f6a5f101e233a13671b6cd073f735452 640 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_12150 f6a5f101e233a13671b6cd073f735452 640 SUPERFAMILY SSF52540 390 608 8.98E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12150 f6a5f101e233a13671b6cd073f735452 640 Pfam PF00005 ABC transporter 410 549 1.3E-25 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_12150 f6a5f101e233a13671b6cd073f735452 640 Gene3D G3DSA:3.40.50.300 380 624 2.5E-60 T 23-10-2018 CDG62_12150 f6a5f101e233a13671b6cd073f735452 640 Gene3D G3DSA:3.40.50.300 10 246 5.5E-61 T 23-10-2018 CDG62_10785 210f308998296c9e2a3f426a9f006325 459 Pfam PF05193 Peptidase M16 inactive domain 204 383 3.4E-32 T 23-10-2018 IPR007863 Peptidase M16, C-terminal CDG62_10785 210f308998296c9e2a3f426a9f006325 459 SUPERFAMILY SSF63411 42 244 8.07E-59 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG62_10785 210f308998296c9e2a3f426a9f006325 459 Gene3D G3DSA:3.30.830.10 37 256 3.9E-76 T 23-10-2018 CDG62_10785 210f308998296c9e2a3f426a9f006325 459 Gene3D G3DSA:3.30.830.10 261 453 1.4E-43 T 23-10-2018 CDG62_10785 210f308998296c9e2a3f426a9f006325 459 Pfam PF00675 Insulinase (Peptidase family M16) 51 173 2.8E-23 T 23-10-2018 IPR011765 Peptidase M16, N-terminal CDG62_10785 210f308998296c9e2a3f426a9f006325 459 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 71 94 - T 23-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CDG62_10785 210f308998296c9e2a3f426a9f006325 459 SUPERFAMILY SSF63411 267 455 1.07E-29 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG62_05505 f4a9e03bee13cf5f99279382050cf772 254 Pfam PF13803 Domain of unknown function (DUF4184) 1 214 3.5E-38 T 23-10-2018 IPR025238 Protein of unknown function DUF4184 CDG62_13270 768fae1368743f38818d9498e5b9982f 407 Pfam PF01743 Poly A polymerase head domain 3 122 1.9E-19 T 23-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CDG62_13270 768fae1368743f38818d9498e5b9982f 407 SUPERFAMILY SSF81301 1 117 5.89E-30 T 23-10-2018 CDG62_13270 768fae1368743f38818d9498e5b9982f 407 Gene3D G3DSA:1.10.3090.10 121 405 5.9E-44 T 23-10-2018 CDG62_13270 768fae1368743f38818d9498e5b9982f 407 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.8E-16 T 23-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CDG62_13270 768fae1368743f38818d9498e5b9982f 407 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 52.098 T 23-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CDG62_13270 768fae1368743f38818d9498e5b9982f 407 Gene3D G3DSA:3.30.460.10 1 120 3.1E-28 T 23-10-2018 CDG62_13270 768fae1368743f38818d9498e5b9982f 407 Hamap MF_01262 CCA-adding enzyme [cca]. 1 400 40.31 T 23-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CDG62_13270 768fae1368743f38818d9498e5b9982f 407 Pfam PF01966 HD domain 230 370 2.3E-5 T 23-10-2018 IPR006674 HD domain CDG62_13270 768fae1368743f38818d9498e5b9982f 407 PIRSF PIRSF000813 1 407 3.2E-190 T 23-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CDG62_13270 768fae1368743f38818d9498e5b9982f 407 SUPERFAMILY SSF81891 120 359 2.88E-53 T 23-10-2018 CDG62_15245 989333b62f3ffd78a1bd6ffbba36c8f8 500 Gene3D G3DSA:3.40.640.10 125 484 4.8E-112 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_15245 989333b62f3ffd78a1bd6ffbba36c8f8 500 Gene3D G3DSA:1.10.10.10 21 116 2.2E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15245 989333b62f3ffd78a1bd6ffbba36c8f8 500 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 84 1.5E-13 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_15245 989333b62f3ffd78a1bd6ffbba36c8f8 500 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 5.8E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_15245 989333b62f3ffd78a1bd6ffbba36c8f8 500 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 5.8E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_15245 989333b62f3ffd78a1bd6ffbba36c8f8 500 Pfam PF00155 Aminotransferase class I and II 165 454 4.0E-26 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG62_15245 989333b62f3ffd78a1bd6ffbba36c8f8 500 SUPERFAMILY SSF46785 19 86 1.02E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_15245 989333b62f3ffd78a1bd6ffbba36c8f8 500 SMART SM00345 25 84 3.5E-12 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_15245 989333b62f3ffd78a1bd6ffbba36c8f8 500 SUPERFAMILY SSF53383 134 492 9.93E-85 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_13200 3c0f7b8d051407a6fa5aee778cedc3cf 337 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 33 70 1.2E-7 T 23-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDG62_13200 3c0f7b8d051407a6fa5aee778cedc3cf 337 PIRSF PIRSF005963 2 334 2.9E-126 T 23-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDG62_13200 3c0f7b8d051407a6fa5aee778cedc3cf 337 SUPERFAMILY SSF102114 49 313 2.88E-63 T 23-10-2018 CDG62_13200 3c0f7b8d051407a6fa5aee778cedc3cf 337 Hamap MF_00206 Lipoyl synthase [lipA]. 1 322 148.391 T 23-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDG62_13200 3c0f7b8d051407a6fa5aee778cedc3cf 337 Gene3D G3DSA:3.20.20.70 81 287 2.5E-20 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_13200 3c0f7b8d051407a6fa5aee778cedc3cf 337 SMART SM00729 81 287 1.7E-18 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG62_13200 3c0f7b8d051407a6fa5aee778cedc3cf 337 Pfam PF04055 Radical SAM superfamily 88 248 2.3E-13 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG62_13200 3c0f7b8d051407a6fa5aee778cedc3cf 337 TIGRFAM TIGR00510 lipA: lipoyl synthase 31 310 1.9E-121 T 23-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDG62_18895 e9dd2f655715ecb3d538b1f33c59576c 370 Pfam PF00534 Glycosyl transferases group 1 188 344 5.4E-17 T 23-10-2018 IPR001296 Glycosyl transferase, family 1 CDG62_18895 e9dd2f655715ecb3d538b1f33c59576c 370 Pfam PF13439 Glycosyltransferase Family 4 25 152 1.1E-7 T 23-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CDG62_18895 e9dd2f655715ecb3d538b1f33c59576c 370 SUPERFAMILY SSF53756 30 369 2.35E-37 T 23-10-2018 CDG62_18895 e9dd2f655715ecb3d538b1f33c59576c 370 Gene3D G3DSA:3.40.50.2000 169 351 3.6E-26 T 23-10-2018 CDG62_18895 e9dd2f655715ecb3d538b1f33c59576c 370 Gene3D G3DSA:3.40.50.2000 12 168 8.6E-6 T 23-10-2018 CDG62_09930 7d8d5568786622e07ec2ad43904e586c 193 Pfam PF04186 FxsA cytoplasmic membrane protein 6 112 5.4E-20 T 23-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CDG62_18235 bf02bfeed2edac2f3f369df87c77fcc7 432 SUPERFAMILY SSF53335 23 359 1.69E-37 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_18235 bf02bfeed2edac2f3f369df87c77fcc7 432 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 264 270 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG62_18235 bf02bfeed2edac2f3f369df87c77fcc7 432 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 29 290 1.5E-26 T 23-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CDG62_19000 9f6d47460c9c73c03e3f01b77cbc91b6 248 Pfam PF00106 short chain dehydrogenase 17 213 1.8E-43 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_19000 9f6d47460c9c73c03e3f01b77cbc91b6 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG62_19000 9f6d47460c9c73c03e3f01b77cbc91b6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 3.4E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_19000 9f6d47460c9c73c03e3f01b77cbc91b6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 3.4E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_19000 9f6d47460c9c73c03e3f01b77cbc91b6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.4E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_19000 9f6d47460c9c73c03e3f01b77cbc91b6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 3.4E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_19000 9f6d47460c9c73c03e3f01b77cbc91b6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 3.4E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_19000 9f6d47460c9c73c03e3f01b77cbc91b6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 3.4E-22 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_19000 9f6d47460c9c73c03e3f01b77cbc91b6 248 SUPERFAMILY SSF51735 12 244 3.06E-58 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_19000 9f6d47460c9c73c03e3f01b77cbc91b6 248 Gene3D G3DSA:3.40.50.720 3 248 2.0E-67 T 23-10-2018 CDG62_03260 35f1146da77321c1a430d35d75de3c00 299 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 293 7.0E-112 T 23-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_03260 35f1146da77321c1a430d35d75de3c00 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 7.4E-36 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG62_03260 35f1146da77321c1a430d35d75de3c00 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 7.4E-36 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG62_03260 35f1146da77321c1a430d35d75de3c00 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 7.4E-36 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG62_03260 35f1146da77321c1a430d35d75de3c00 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 7.4E-36 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG62_03260 35f1146da77321c1a430d35d75de3c00 299 Pfam PF00701 Dihydrodipicolinate synthetase family 9 294 5.5E-104 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG62_03260 35f1146da77321c1a430d35d75de3c00 299 SUPERFAMILY SSF51569 8 295 3.66E-103 T 23-10-2018 CDG62_03260 35f1146da77321c1a430d35d75de3c00 299 Gene3D G3DSA:3.20.20.70 7 298 1.3E-117 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_03260 35f1146da77321c1a430d35d75de3c00 299 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 139 169 - T 23-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CDG62_03260 35f1146da77321c1a430d35d75de3c00 299 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 44 61 - T 23-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_03260 35f1146da77321c1a430d35d75de3c00 299 PIRSF PIRSF001365 3 298 3.7E-94 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG62_03260 35f1146da77321c1a430d35d75de3c00 299 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 294 65.949 T 23-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CDG62_03260 35f1146da77321c1a430d35d75de3c00 299 SMART SM01130 7 296 2.4E-141 T 23-10-2018 IPR002220 DapA-like GO:0016829 CDG62_15225 31df42dc50c37b3b0957004633d09a6f 140 SUPERFAMILY SSF54909 63 139 1.19E-13 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_15225 31df42dc50c37b3b0957004633d09a6f 140 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.2E-13 T 23-10-2018 CDG62_15225 31df42dc50c37b3b0957004633d09a6f 140 Gene3D G3DSA:1.10.10.10 1 52 2.9E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15225 31df42dc50c37b3b0957004633d09a6f 140 SMART SM00344 1 107 6.9E-15 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG62_15225 31df42dc50c37b3b0957004633d09a6f 140 Pfam PF01037 Lrp/AsnC ligand binding domain 68 137 2.4E-12 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG62_15225 31df42dc50c37b3b0957004633d09a6f 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.0E-10 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_15225 31df42dc50c37b3b0957004633d09a6f 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.0E-10 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_15225 31df42dc50c37b3b0957004633d09a6f 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.0E-10 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_15225 31df42dc50c37b3b0957004633d09a6f 140 Gene3D G3DSA:3.30.70.920 54 140 1.2E-15 T 23-10-2018 CDG62_15225 31df42dc50c37b3b0957004633d09a6f 140 SUPERFAMILY SSF46785 1 56 4.23E-14 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_18210 e2de7803cd95961c3157cd0a90facc7e 482 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 38 135 4.7E-11 T 23-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CDG62_18210 e2de7803cd95961c3157cd0a90facc7e 482 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 479 35.849 T 23-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CDG62_18210 e2de7803cd95961c3157cd0a90facc7e 482 SUPERFAMILY SSF53187 163 477 4.71E-122 T 23-10-2018 CDG62_18210 e2de7803cd95961c3157cd0a90facc7e 482 SUPERFAMILY SSF52949 1 158 2.88E-13 T 23-10-2018 CDG62_18210 e2de7803cd95961c3157cd0a90facc7e 482 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 331 338 - T 23-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CDG62_18210 e2de7803cd95961c3157cd0a90facc7e 482 Gene3D G3DSA:3.40.220.10 1 166 5.5E-15 T 23-10-2018 CDG62_18210 e2de7803cd95961c3157cd0a90facc7e 482 Gene3D G3DSA:3.40.630.10 167 479 2.4E-135 T 23-10-2018 CDG62_18210 e2de7803cd95961c3157cd0a90facc7e 482 PRINTS PR00481 Cytosol aminopeptidase signature 305 326 4.1E-54 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDG62_18210 e2de7803cd95961c3157cd0a90facc7e 482 PRINTS PR00481 Cytosol aminopeptidase signature 268 289 4.1E-54 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDG62_18210 e2de7803cd95961c3157cd0a90facc7e 482 PRINTS PR00481 Cytosol aminopeptidase signature 355 370 4.1E-54 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDG62_18210 e2de7803cd95961c3157cd0a90facc7e 482 PRINTS PR00481 Cytosol aminopeptidase signature 246 263 4.1E-54 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDG62_18210 e2de7803cd95961c3157cd0a90facc7e 482 PRINTS PR00481 Cytosol aminopeptidase signature 327 347 4.1E-54 T 23-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CDG62_18210 e2de7803cd95961c3157cd0a90facc7e 482 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 169 470 3.2E-122 T 23-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CDG62_15065 7a66ae41479c5f9000a8ebf3226f55ef 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.4E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_15065 7a66ae41479c5f9000a8ebf3226f55ef 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_15065 7a66ae41479c5f9000a8ebf3226f55ef 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.4E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_15065 7a66ae41479c5f9000a8ebf3226f55ef 261 Gene3D G3DSA:3.40.50.720 1 261 2.5E-80 T 23-10-2018 CDG62_15065 7a66ae41479c5f9000a8ebf3226f55ef 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.3E-41 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_15065 7a66ae41479c5f9000a8ebf3226f55ef 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.3E-41 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_15065 7a66ae41479c5f9000a8ebf3226f55ef 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.3E-41 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_15065 7a66ae41479c5f9000a8ebf3226f55ef 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.3E-41 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_15065 7a66ae41479c5f9000a8ebf3226f55ef 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.3E-41 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_15065 7a66ae41479c5f9000a8ebf3226f55ef 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 2.3E-41 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_15065 7a66ae41479c5f9000a8ebf3226f55ef 261 SUPERFAMILY SSF51735 6 260 1.26E-83 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_15065 7a66ae41479c5f9000a8ebf3226f55ef 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG62_15065 7a66ae41479c5f9000a8ebf3226f55ef 261 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 8 261 8.8E-106 T 23-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 CDG62_15065 7a66ae41479c5f9000a8ebf3226f55ef 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 259 2.0E-64 T 23-10-2018 CDG62_14680 1399885d5ca75a94a43811ca0790fc3c 247 SUPERFAMILY SSF161098 24 223 1.7E-37 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_14680 1399885d5ca75a94a43811ca0790fc3c 247 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 131 5.0E-14 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CDG62_14680 1399885d5ca75a94a43811ca0790fc3c 247 Gene3D G3DSA:1.10.3720.10 18 239 3.8E-45 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_14680 1399885d5ca75a94a43811ca0790fc3c 247 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 238 6.3E-25 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_14930 28d5f95d262135ce3701fd326eb20759 495 SMART SM00845 344 494 1.9E-77 T 23-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 CDG62_14930 28d5f95d262135ce3701fd326eb20759 495 SUPERFAMILY SSF89095 313 420 4.71E-32 T 23-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 CDG62_14930 28d5f95d262135ce3701fd326eb20759 495 SUPERFAMILY SSF55931 21 312 5.17E-114 T 23-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CDG62_14930 28d5f95d262135ce3701fd326eb20759 495 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 161 175 - T 23-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 CDG62_14930 28d5f95d262135ce3701fd326eb20759 495 Gene3D G3DSA:1.10.10.410 435 495 1.7E-24 T 23-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CDG62_14930 28d5f95d262135ce3701fd326eb20759 495 Gene3D G3DSA:1.10.150.380 316 432 2.3E-33 T 23-10-2018 CDG62_14930 28d5f95d262135ce3701fd326eb20759 495 Pfam PF02637 GatB domain 345 494 1.9E-50 T 23-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 CDG62_14930 28d5f95d262135ce3701fd326eb20759 495 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 19 495 36.921 T 23-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CDG62_14930 28d5f95d262135ce3701fd326eb20759 495 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 20 494 4.4E-162 T 23-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CDG62_14930 28d5f95d262135ce3701fd326eb20759 495 Pfam PF02934 GatB/GatE catalytic domain 22 304 5.3E-107 T 23-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 CDG62_04720 bb75e873290764b7a3714d02f8a241a0 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 23-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04720 bb75e873290764b7a3714d02f8a241a0 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 25.379 T 23-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04720 bb75e873290764b7a3714d02f8a241a0 109 SUPERFAMILY SSF54843 1 107 1.57E-41 T 23-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 CDG62_04720 bb75e873290764b7a3714d02f8a241a0 109 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 4.3E-36 T 23-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CDG62_04720 bb75e873290764b7a3714d02f8a241a0 109 Gene3D G3DSA:3.90.470.10 1 109 1.5E-44 T 23-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 CDG62_04720 bb75e873290764b7a3714d02f8a241a0 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 6.5E-46 T 23-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_03890 eb2ed9a35cce439c660d5e6cd7d806f9 520 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 270 276 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG62_03890 eb2ed9a35cce439c660d5e6cd7d806f9 520 SUPERFAMILY SSF53335 4 519 2.34E-132 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_03890 eb2ed9a35cce439c660d5e6cd7d806f9 520 Gene3D G3DSA:1.20.1260.30 1 158 2.0E-46 T 23-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CDG62_03890 eb2ed9a35cce439c660d5e6cd7d806f9 520 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 156 172 8.4E-21 T 23-10-2018 CDG62_03890 eb2ed9a35cce439c660d5e6cd7d806f9 520 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 297 321 8.4E-21 T 23-10-2018 CDG62_03890 eb2ed9a35cce439c660d5e6cd7d806f9 520 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 180 194 8.4E-21 T 23-10-2018 CDG62_03890 eb2ed9a35cce439c660d5e6cd7d806f9 520 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 267 279 8.4E-21 T 23-10-2018 CDG62_03890 eb2ed9a35cce439c660d5e6cd7d806f9 520 Pfam PF02384 N-6 DNA Methylase 132 457 2.5E-84 T 23-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CDG62_03890 eb2ed9a35cce439c660d5e6cd7d806f9 520 Pfam PF12161 HsdM N-terminal domain 7 122 3.4E-12 T 23-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CDG62_03890 eb2ed9a35cce439c660d5e6cd7d806f9 520 Gene3D G3DSA:3.40.50.150 159 482 1.2E-91 T 23-10-2018 CDG62_05375 4fcc09b9dca1ae26a86acfaba5fa3145 189 SUPERFAMILY SSF140478 24 164 4.97E-34 T 23-10-2018 IPR023353 LemA-like domain superfamily CDG62_05375 4fcc09b9dca1ae26a86acfaba5fa3145 189 Gene3D G3DSA:1.20.1440.20 15 181 4.9E-30 T 23-10-2018 IPR023353 LemA-like domain superfamily CDG62_05375 4fcc09b9dca1ae26a86acfaba5fa3145 189 Pfam PF04011 LemA family 6 167 2.2E-34 T 23-10-2018 IPR007156 LemA CDG62_02245 716334c75db8f13cb661010e807cd060 424 Gene3D G3DSA:3.40.47.10 1 424 5.5E-100 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_02245 716334c75db8f13cb661010e807cd060 424 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 423 5.6E-112 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_02245 716334c75db8f13cb661010e807cd060 424 Pfam PF00108 Thiolase, N-terminal domain 6 274 1.1E-53 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG62_02245 716334c75db8f13cb661010e807cd060 424 PIRSF PIRSF000429 1 424 2.3E-100 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_02245 716334c75db8f13cb661010e807cd060 424 Pfam PF02803 Thiolase, C-terminal domain 283 423 2.4E-30 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG62_02245 716334c75db8f13cb661010e807cd060 424 SUPERFAMILY SSF53901 284 423 3.33E-27 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_02245 716334c75db8f13cb661010e807cd060 424 SUPERFAMILY SSF53901 5 280 5.76E-55 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_14885 f4d7da2a07e6406fb38ce42850df013e 244 SUPERFAMILY SSF52402 13 201 1.64E-47 T 23-10-2018 CDG62_14885 f4d7da2a07e6406fb38ce42850df013e 244 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 42 237 7.3E-80 T 23-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 CDG62_14885 f4d7da2a07e6406fb38ce42850df013e 244 PIRSF PIRSF000857 4 244 4.4E-80 T 23-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CDG62_14885 f4d7da2a07e6406fb38ce42850df013e 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 36 213 4.0E-48 T 23-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 CDG62_14885 f4d7da2a07e6406fb38ce42850df013e 244 Gene3D G3DSA:3.40.50.620 9 228 1.4E-67 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_12875 70624d6b2b5bc096f5132ef980df4c1a 545 SUPERFAMILY SSF56425 238 353 1.79E-41 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_12875 70624d6b2b5bc096f5132ef980df4c1a 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.1E-8 T 23-10-2018 CDG62_12875 70624d6b2b5bc096f5132ef980df4c1a 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 1.1E-8 T 23-10-2018 CDG62_12875 70624d6b2b5bc096f5132ef980df4c1a 545 SUPERFAMILY SSF46977 426 527 4.71E-32 T 23-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_12875 70624d6b2b5bc096f5132ef980df4c1a 545 Gene3D G3DSA:1.20.58.100 425 540 9.1E-44 T 23-10-2018 CDG62_12875 70624d6b2b5bc096f5132ef980df4c1a 545 PIRSF PIRSF000171 3 291 2.2E-18 T 23-10-2018 CDG62_12875 70624d6b2b5bc096f5132ef980df4c1a 545 PIRSF PIRSF000171 337 540 5.3E-16 T 23-10-2018 CDG62_12875 70624d6b2b5bc096f5132ef980df4c1a 545 SUPERFAMILY SSF51905 5 447 8.3E-68 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_12875 70624d6b2b5bc096f5132ef980df4c1a 545 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 11 520 2.4E-191 T 23-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 CDG62_12875 70624d6b2b5bc096f5132ef980df4c1a 545 Pfam PF00890 FAD binding domain 13 392 1.7E-92 T 23-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_12875 70624d6b2b5bc096f5132ef980df4c1a 545 Gene3D G3DSA:3.50.50.60 13 404 1.2E-148 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_12875 70624d6b2b5bc096f5132ef980df4c1a 545 Gene3D G3DSA:3.90.700.10 248 358 1.2E-148 T 23-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_12875 70624d6b2b5bc096f5132ef980df4c1a 545 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 524 3.9E-14 T 23-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_16430 24531c12b44619809e7c6cf93f878583 177 Pfam PF04751 Protein of unknown function (DUF615) 19 168 6.9E-31 T 23-10-2018 IPR006839 Ribosome-associated, YjgA CDG62_16430 24531c12b44619809e7c6cf93f878583 177 SUPERFAMILY SSF158710 30 173 6.67E-34 T 23-10-2018 IPR023153 PSPTO4464-like domain superfamily CDG62_16430 24531c12b44619809e7c6cf93f878583 177 Gene3D G3DSA:1.10.60.30 103 173 1.1E-6 T 23-10-2018 CDG62_16430 24531c12b44619809e7c6cf93f878583 177 Gene3D G3DSA:1.10.60.30 29 102 8.5E-18 T 23-10-2018 CDG62_16430 24531c12b44619809e7c6cf93f878583 177 PIRSF PIRSF016183 3 177 3.9E-40 T 23-10-2018 IPR006839 Ribosome-associated, YjgA CDG62_14555 e4f835ce2798aa2f99149721a52d4734 336 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 331 6.2E-110 T 23-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family CDG62_14555 e4f835ce2798aa2f99149721a52d4734 336 Gene3D G3DSA:3.40.190.10 134 270 4.1E-97 T 23-10-2018 CDG62_14555 e4f835ce2798aa2f99149721a52d4734 336 Pfam PF16868 NMT1-like family 51 331 8.2E-89 T 23-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family CDG62_14555 e4f835ce2798aa2f99149721a52d4734 336 Gene3D G3DSA:3.40.190.10 51 331 4.1E-97 T 23-10-2018 CDG62_14555 e4f835ce2798aa2f99149721a52d4734 336 SUPERFAMILY SSF53850 47 332 5.31E-76 T 23-10-2018 CDG62_17030 ee1bfd62903f2c9c4007ffdbfb148480 86 SUPERFAMILY SSF54928 2 83 2.42E-24 T 23-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 CDG62_17030 ee1bfd62903f2c9c4007ffdbfb148480 86 Gene3D G3DSA:3.30.70.330 1 86 4.1E-24 T 23-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CDG62_17030 ee1bfd62903f2c9c4007ffdbfb148480 86 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 71 3.4E-19 T 23-10-2018 IPR000504 RNA recognition motif domain GO:0003676 CDG62_17030 ee1bfd62903f2c9c4007ffdbfb148480 86 SMART SM00360 2 75 1.6E-22 T 23-10-2018 IPR000504 RNA recognition motif domain GO:0003676 CDG62_16460 73e93c586b19589bfec5fccec29557f6 489 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 3 444 33.234 T 23-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CDG62_16460 73e93c586b19589bfec5fccec29557f6 489 SUPERFAMILY SSF81891 157 374 7.32E-38 T 23-10-2018 CDG62_16460 73e93c586b19589bfec5fccec29557f6 489 Pfam PF12626 Polymerase A arginine-rich C-terminus 296 407 3.2E-25 T 23-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain CDG62_16460 73e93c586b19589bfec5fccec29557f6 489 SUPERFAMILY SSF81301 10 156 1.74E-35 T 23-10-2018 CDG62_16460 73e93c586b19589bfec5fccec29557f6 489 Gene3D G3DSA:3.30.460.10 2 155 3.4E-47 T 23-10-2018 CDG62_16460 73e93c586b19589bfec5fccec29557f6 489 Pfam PF01743 Poly A polymerase head domain 34 159 1.4E-30 T 23-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CDG62_16460 73e93c586b19589bfec5fccec29557f6 489 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 6 416 3.3E-116 T 23-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CDG62_16460 73e93c586b19589bfec5fccec29557f6 489 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 186 246 1.5E-11 T 23-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CDG62_16460 73e93c586b19589bfec5fccec29557f6 489 Gene3D G3DSA:1.10.3090.10 157 399 3.8E-67 T 23-10-2018 CDG62_03755 10d5e9834ec2e2fbda1a5e855b8aa91a 943 Gene3D G3DSA:3.40.50.300 8 596 6.1E-246 T 23-10-2018 CDG62_03755 10d5e9834ec2e2fbda1a5e855b8aa91a 943 SUPERFAMILY SSF52540 6 570 1.6E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_03755 10d5e9834ec2e2fbda1a5e855b8aa91a 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 926 0.0 T 23-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 CDG62_03755 10d5e9834ec2e2fbda1a5e855b8aa91a 943 ProSitePatterns PS00211 ABC transporters family signature. 832 846 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_03755 10d5e9834ec2e2fbda1a5e855b8aa91a 943 Pfam PF00005 ABC transporter 625 862 9.6E-12 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_03755 10d5e9834ec2e2fbda1a5e855b8aa91a 943 Gene3D G3DSA:1.20.1580.10 694 832 4.0E-142 T 23-10-2018 CDG62_03755 10d5e9834ec2e2fbda1a5e855b8aa91a 943 Gene3D G3DSA:3.40.50.300 618 938 4.0E-142 T 23-10-2018 CDG62_03755 10d5e9834ec2e2fbda1a5e855b8aa91a 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 942 22.354 T 23-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 CDG62_03755 10d5e9834ec2e2fbda1a5e855b8aa91a 943 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_03755 10d5e9834ec2e2fbda1a5e855b8aa91a 943 Gene3D G3DSA:3.30.190.20 132 245 6.1E-246 T 23-10-2018 CDG62_03755 10d5e9834ec2e2fbda1a5e855b8aa91a 943 Gene3D G3DSA:1.20.1580.10 92 493 6.1E-246 T 23-10-2018 CDG62_03755 10d5e9834ec2e2fbda1a5e855b8aa91a 943 SUPERFAMILY SSF52540 623 915 2.66E-54 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_03755 10d5e9834ec2e2fbda1a5e855b8aa91a 943 Gene3D G3DSA:1.10.8.280 288 404 6.1E-246 T 23-10-2018 CDG62_09980 f63bfd4fb6f48a2208b7c5da470132b8 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 3.7E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_09980 f63bfd4fb6f48a2208b7c5da470132b8 187 Gene3D G3DSA:1.10.10.60 10 54 4.8E-11 T 23-10-2018 CDG62_09980 f63bfd4fb6f48a2208b7c5da470132b8 187 SUPERFAMILY SSF46689 3 75 1.39E-13 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_09980 f63bfd4fb6f48a2208b7c5da470132b8 187 Gene3D G3DSA:1.10.357.10 55 179 4.7E-25 T 23-10-2018 CDG62_09980 f63bfd4fb6f48a2208b7c5da470132b8 187 SUPERFAMILY SSF48498 88 180 8.9E-19 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG62_09980 f63bfd4fb6f48a2208b7c5da470132b8 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 6.4E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_09980 f63bfd4fb6f48a2208b7c5da470132b8 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 6.4E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_05250 0f8c6e3b0144a8e0a211bb5c4fe76355 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 166 8.8E-59 T 23-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CDG62_05250 0f8c6e3b0144a8e0a211bb5c4fe76355 575 Gene3D G3DSA:3.40.50.1220 191 362 7.9E-62 T 23-10-2018 CDG62_05250 0f8c6e3b0144a8e0a211bb5c4fe76355 575 Gene3D G3DSA:3.40.50.970 366 574 5.7E-64 T 23-10-2018 CDG62_05250 0f8c6e3b0144a8e0a211bb5c4fe76355 575 SUPERFAMILY SSF52518 374 569 4.47E-66 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG62_05250 0f8c6e3b0144a8e0a211bb5c4fe76355 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 3.1E-45 T 23-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CDG62_05250 0f8c6e3b0144a8e0a211bb5c4fe76355 575 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 568 1.3E-252 T 23-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CDG62_05250 0f8c6e3b0144a8e0a211bb5c4fe76355 575 SUPERFAMILY SSF52467 190 362 1.21E-65 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDG62_05250 0f8c6e3b0144a8e0a211bb5c4fe76355 575 SUPERFAMILY SSF52518 4 179 4.63E-63 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG62_05250 0f8c6e3b0144a8e0a211bb5c4fe76355 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 7.3E-47 T 23-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CDG62_05250 0f8c6e3b0144a8e0a211bb5c4fe76355 575 Gene3D G3DSA:3.40.50.970 1 182 1.7E-72 T 23-10-2018 CDG62_03380 5ea2bc627dbc5d0412c9d8c76c6dd5d1 191 SUPERFAMILY SSF53474 3 191 9.18E-15 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_03380 5ea2bc627dbc5d0412c9d8c76c6dd5d1 191 Pfam PF05728 Uncharacterised protein family (UPF0227) 3 186 1.4E-41 T 23-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CDG62_03380 5ea2bc627dbc5d0412c9d8c76c6dd5d1 191 Gene3D G3DSA:3.40.50.1820 1 189 4.5E-52 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_12680 d850a63fdcc14b65b457a85c9202ba48 510 SUPERFAMILY SSF53383 24 495 3.09E-113 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_12680 d850a63fdcc14b65b457a85c9202ba48 510 Gene3D G3DSA:3.90.1150.170 47 486 5.9E-127 T 23-10-2018 CDG62_12680 d850a63fdcc14b65b457a85c9202ba48 510 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 84 428 1.7E-60 T 23-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 CDG62_12680 d850a63fdcc14b65b457a85c9202ba48 510 Gene3D G3DSA:3.40.640.10 113 372 5.9E-127 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_12680 d850a63fdcc14b65b457a85c9202ba48 510 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 312 333 - T 23-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 CDG62_14160 3a015449ce8710ba4c218c9ff90fc1c3 213 SUPERFAMILY SSF52266 33 211 1.83E-48 T 23-10-2018 CDG62_14160 3a015449ce8710ba4c218c9ff90fc1c3 213 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 37 196 1.4E-25 T 23-10-2018 IPR013830 SGNH hydrolase-type esterase domain CDG62_14160 3a015449ce8710ba4c218c9ff90fc1c3 213 Gene3D G3DSA:3.40.50.1110 31 213 7.7E-66 T 23-10-2018 IPR036514 SGNH hydrolase superfamily CDG62_15580 9b04ce8fa2ff5b1f6e8f38beb30b4750 440 SUPERFAMILY SSF55874 294 416 1.44E-15 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_15580 9b04ce8fa2ff5b1f6e8f38beb30b4750 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 412 2.2E-8 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_15580 9b04ce8fa2ff5b1f6e8f38beb30b4750 440 SMART SM00388 220 282 3.8E-11 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_15580 9b04ce8fa2ff5b1f6e8f38beb30b4750 440 SUPERFAMILY SSF47384 203 279 1.92E-12 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG62_15580 9b04ce8fa2ff5b1f6e8f38beb30b4750 440 Gene3D G3DSA:3.30.565.10 279 420 1.0E-13 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_15580 9b04ce8fa2ff5b1f6e8f38beb30b4750 440 SMART SM00387 326 431 4.0E-5 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_15580 9b04ce8fa2ff5b1f6e8f38beb30b4750 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 279 4.8E-10 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_15580 9b04ce8fa2ff5b1f6e8f38beb30b4750 440 Gene3D G3DSA:1.10.287.130 165 278 1.5E-19 T 23-10-2018 CDG62_15805 6eb4fc277804ee0e43d9b40085fc8bc7 373 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 345 9.6E-130 T 23-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 CDG62_15805 6eb4fc277804ee0e43d9b40085fc8bc7 373 SUPERFAMILY SSF52540 4 338 2.33E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_15805 6eb4fc277804ee0e43d9b40085fc8bc7 373 Pfam PF00437 Type II/IV secretion system protein 11 269 1.4E-36 T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG62_15805 6eb4fc277804ee0e43d9b40085fc8bc7 373 Gene3D G3DSA:3.40.50.300 102 356 2.3E-86 T 23-10-2018 CDG62_15805 6eb4fc277804ee0e43d9b40085fc8bc7 373 Gene3D G3DSA:3.30.450.90 1 100 1.1E-25 T 23-10-2018 CDG62_15805 6eb4fc277804ee0e43d9b40085fc8bc7 373 SMART SM00382 123 249 4.4E-4 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_08070 13b2961dd79a070e53e9e9b4164ab908 411 Gene3D G3DSA:2.30.40.10 10 410 1.4E-79 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG62_08070 13b2961dd79a070e53e9e9b4164ab908 411 Gene3D G3DSA:3.20.20.140 53 364 1.4E-79 T 23-10-2018 CDG62_08070 13b2961dd79a070e53e9e9b4164ab908 411 SUPERFAMILY SSF51338 6 409 7.0E-10 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG62_08070 13b2961dd79a070e53e9e9b4164ab908 411 SUPERFAMILY SSF51556 53 363 1.02E-68 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 615 630 2.5E-6 T 23-10-2018 CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 197 216 2.5E-6 T 23-10-2018 CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 Pfam PF06480 FtsH Extracellular 9 88 1.9E-9 T 23-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 Gene3D G3DSA:1.20.58.760 402 600 8.5E-73 T 23-10-2018 CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 Gene3D G3DSA:2.40.50.920 25 100 5.5E-14 T 23-10-2018 CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 Gene3D G3DSA:1.10.8.60 328 401 1.8E-27 T 23-10-2018 CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 103 595 3.0E-234 T 23-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 Pfam PF01434 Peptidase family M41 387 593 2.0E-78 T 23-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 SMART SM00382 189 328 1.2E-25 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 325 1.4E-45 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 SUPERFAMILY SSF140990 407 602 7.98E-75 T 23-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 Gene3D G3DSA:3.40.50.300 141 327 5.1E-70 T 23-10-2018 CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 ProSitePatterns PS00674 AAA-protein family signature. 296 314 - T 23-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 609 36.698 T 23-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CDG62_07055 68e9c6c21154b930c8f81d83c6ca1e43 630 SUPERFAMILY SSF52540 147 395 1.64E-72 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_06580 434111b11aa40e6aff6ea677687432a9 118 Pfam PF01906 Putative heavy-metal-binding 1 103 5.8E-38 T 23-10-2018 IPR002765 Uncharacterised protein family UPF0145 CDG62_06580 434111b11aa40e6aff6ea677687432a9 118 Gene3D G3DSA:3.30.110.70 3 105 2.3E-32 T 23-10-2018 CDG62_06580 434111b11aa40e6aff6ea677687432a9 118 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.023 T 23-10-2018 IPR002765 Uncharacterised protein family UPF0145 CDG62_06580 434111b11aa40e6aff6ea677687432a9 118 SUPERFAMILY SSF117782 1 105 4.97E-36 T 23-10-2018 IPR035439 UPF0145 domain superfamily CDG62_12610 96e28077e618ca43c206681963adc124 75 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_12610 96e28077e618ca43c206681963adc124 75 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 29.876 T 23-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_12610 96e28077e618ca43c206681963adc124 75 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.0E-32 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_12610 96e28077e618ca43c206681963adc124 75 Gene3D G3DSA:2.30.170.50 1 70 8.1E-31 T 23-10-2018 CDG62_12610 96e28077e618ca43c206681963adc124 75 SUPERFAMILY SSF143800 1 67 4.71E-26 T 23-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_12610 96e28077e618ca43c206681963adc124 75 PRINTS PR01249 Ribosomal protein L31 signature 47 65 8.4E-21 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_12610 96e28077e618ca43c206681963adc124 75 PRINTS PR01249 Ribosomal protein L31 signature 2 19 8.4E-21 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_12610 96e28077e618ca43c206681963adc124 75 PRINTS PR01249 Ribosomal protein L31 signature 32 47 8.4E-21 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_12610 96e28077e618ca43c206681963adc124 75 Pfam PF01197 Ribosomal protein L31 1 66 7.6E-30 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_10895 ee7b2087252366826e4fab8594b5425f 476 SUPERFAMILY SSF55073 320 474 8.63E-41 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_10895 ee7b2087252366826e4fab8594b5425f 476 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 314 474 3.7E-45 T 23-10-2018 IPR000160 GGDEF domain CDG62_10895 ee7b2087252366826e4fab8594b5425f 476 Gene3D G3DSA:3.30.70.270 313 476 2.0E-48 T 23-10-2018 CDG62_10895 ee7b2087252366826e4fab8594b5425f 476 Pfam PF00990 Diguanylate cyclase, GGDEF domain 315 471 1.7E-44 T 23-10-2018 IPR000160 GGDEF domain CDG62_10895 ee7b2087252366826e4fab8594b5425f 476 SMART SM00267 304 475 4.4E-53 T 23-10-2018 IPR000160 GGDEF domain CDG62_10895 ee7b2087252366826e4fab8594b5425f 476 Pfam PF05231 MASE1 22 299 2.7E-9 T 23-10-2018 IPR007895 MASE1 CDG62_10650 cf19903f7a16e24051ed008bc221b473 621 Pfam PF13616 PPIC-type PPIASE domain 254 361 5.2E-30 T 23-10-2018 CDG62_10650 cf19903f7a16e24051ed008bc221b473 621 SUPERFAMILY SSF54534 268 359 3.53E-24 T 23-10-2018 CDG62_10650 cf19903f7a16e24051ed008bc221b473 621 Pfam PF13624 SurA N-terminal domain 1 158 4.1E-37 T 23-10-2018 CDG62_10650 cf19903f7a16e24051ed008bc221b473 621 Gene3D G3DSA:3.10.50.40 265 362 8.8E-29 T 23-10-2018 CDG62_10650 cf19903f7a16e24051ed008bc221b473 621 SUPERFAMILY SSF109998 41 231 2.63E-25 T 23-10-2018 IPR027304 Trigger factor/SurA domain superfamily CDG62_16990 6ccfab535403efed9267e9afb181aebf 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 2.5E-12 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_16990 6ccfab535403efed9267e9afb181aebf 230 Gene3D G3DSA:1.10.357.10 4 220 3.0E-64 T 23-10-2018 CDG62_16990 6ccfab535403efed9267e9afb181aebf 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.2E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_16990 6ccfab535403efed9267e9afb181aebf 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.2E-8 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_16990 6ccfab535403efed9267e9afb181aebf 230 Pfam PF13972 Bacterial transcriptional repressor 62 208 4.1E-37 T 23-10-2018 IPR025722 Bacterial transcriptional repressor TetR CDG62_16990 6ccfab535403efed9267e9afb181aebf 230 SUPERFAMILY SSF46689 5 81 2.64E-16 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_15190 099fdc053717beef38ae12edfa9be112 499 Pfam PF00324 Amino acid permease 40 481 1.7E-102 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG62_15190 099fdc053717beef38ae12edfa9be112 499 PIRSF PIRSF006060 25 498 3.7E-68 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_15190 099fdc053717beef38ae12edfa9be112 499 Gene3D G3DSA:1.20.1740.10 30 490 1.8E-60 T 23-10-2018 CDG62_16880 dc11d8b0e0d88db666e3a14c058627ae 197 Gene3D G3DSA:3.40.50.150 2 172 1.5E-26 T 23-10-2018 CDG62_16880 dc11d8b0e0d88db666e3a14c058627ae 197 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 2 195 6.5E-79 T 23-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 CDG62_16880 dc11d8b0e0d88db666e3a14c058627ae 197 Pfam PF07021 Methionine biosynthesis protein MetW 2 194 3.0E-75 T 23-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 CDG62_16880 dc11d8b0e0d88db666e3a14c058627ae 197 SUPERFAMILY SSF53335 7 172 4.22E-30 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_16830 5550418ccc58393fcd42b9eacf913e00 182 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 98 155 2.3E-9 T 23-10-2018 IPR018637 Domain of unknown function DUF2059 CDG62_06015 4097de8ba28e5c51a3a263c4638057ff 371 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 343 3.1E-69 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDG62_06015 4097de8ba28e5c51a3a263c4638057ff 371 Gene3D G3DSA:3.20.20.70 2 360 5.5E-116 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_06015 4097de8ba28e5c51a3a263c4638057ff 371 SUPERFAMILY SSF51395 1 363 6.72E-109 T 23-10-2018 CDG62_10440 239b0b64af82d9d1c136e6d5982ec614 556 Gene3D G3DSA:3.20.20.70 119 529 7.1E-107 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_10440 239b0b64af82d9d1c136e6d5982ec614 556 PIRSF PIRSF006429 36 555 4.3E-159 T 23-10-2018 IPR024188 Glutamate synthase large subunit-like protein CDG62_10440 239b0b64af82d9d1c136e6d5982ec614 556 SUPERFAMILY SSF51395 42 525 4.97E-129 T 23-10-2018 CDG62_10440 239b0b64af82d9d1c136e6d5982ec614 556 PIRSF PIRSF500060 35 556 2.0E-228 T 23-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria CDG62_10440 239b0b64af82d9d1c136e6d5982ec614 556 Pfam PF01645 Conserved region in glutamate synthase 180 497 4.8E-85 T 23-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CDG62_11955 43a59c7efa1921fe330d6a2a590ed4da 203 Pfam PF01810 LysE type translocator 13 202 6.7E-22 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_14095 dcbd564662d9460a74ba1b7b35840008 481 Gene3D G3DSA:2.40.160.130 22 476 3.4E-165 T 23-10-2018 IPR038636 Capsule assembly protein Wzi superfamily CDG62_14095 dcbd564662d9460a74ba1b7b35840008 481 Pfam PF14052 Capsule assembly protein Wzi 93 467 1.5E-111 T 23-10-2018 IPR026950 Capsule assembly protein Wzi CDG62_09130 09c920adc71901a9a7f6dee85b7e61b1 179 Pfam PF10400 Virulence activator alpha C-term 91 174 2.5E-17 T 23-10-2018 IPR018309 Transcription regulator PadR, C-terminal CDG62_09130 09c920adc71901a9a7f6dee85b7e61b1 179 Gene3D G3DSA:1.10.10.10 1 87 4.4E-16 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_09130 09c920adc71901a9a7f6dee85b7e61b1 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 79 2.5E-9 T 23-10-2018 IPR005149 Transcription regulator PadR, N-terminal CDG62_09130 09c920adc71901a9a7f6dee85b7e61b1 179 SUPERFAMILY SSF46785 3 176 3.14E-33 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_10220 13f99a3eef41566de66c065d895cf9d3 227 Hamap MF_00238 Cytidylate kinase [cmk]. 4 225 32.05 T 23-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CDG62_10220 13f99a3eef41566de66c065d895cf9d3 227 SUPERFAMILY SSF52540 4 224 5.53E-43 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10220 13f99a3eef41566de66c065d895cf9d3 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 218 2.2E-71 T 23-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CDG62_10220 13f99a3eef41566de66c065d895cf9d3 227 Pfam PF02224 Cytidylate kinase 6 222 1.0E-65 T 23-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CDG62_10220 13f99a3eef41566de66c065d895cf9d3 227 Gene3D G3DSA:3.40.50.300 1 227 6.0E-76 T 23-10-2018 CDG62_17120 0f9831f472be076b5c12fca3118016bc 322 SMART SM00870 3 315 1.3E-20 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG62_17120 0f9831f472be076b5c12fca3118016bc 322 Pfam PF00710 Asparaginase, N-terminal 3 177 3.8E-32 T 23-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CDG62_17120 0f9831f472be076b5c12fca3118016bc 322 PIRSF PIRSF001220 1 314 1.3E-32 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG62_17120 0f9831f472be076b5c12fca3118016bc 322 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 1.1E-6 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG62_17120 0f9831f472be076b5c12fca3118016bc 322 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 1.1E-6 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG62_17120 0f9831f472be076b5c12fca3118016bc 322 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 1.1E-6 T 23-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CDG62_17120 0f9831f472be076b5c12fca3118016bc 322 SUPERFAMILY SSF53774 1 319 7.98E-58 T 23-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 CDG62_17120 0f9831f472be076b5c12fca3118016bc 322 Gene3D G3DSA:3.40.50.1170 1 207 2.3E-35 T 23-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 CDG62_17120 0f9831f472be076b5c12fca3118016bc 322 Gene3D G3DSA:3.40.50.40 209 315 8.8E-12 T 23-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 CDG62_17120 0f9831f472be076b5c12fca3118016bc 322 PIRSF PIRSF500176 1 310 2.5E-39 T 23-10-2018 CDG62_11880 66c60863df3d2f0f2d205f2056ac371e 280 SUPERFAMILY SSF53850 37 278 5.87E-61 T 23-10-2018 CDG62_11880 66c60863df3d2f0f2d205f2056ac371e 280 Pfam PF03180 NLPA lipoprotein 38 272 3.1E-68 T 23-10-2018 IPR004872 Lipoprotein NlpA family CDG62_11880 66c60863df3d2f0f2d205f2056ac371e 280 Gene3D G3DSA:3.40.190.10 44 259 2.0E-65 T 23-10-2018 CDG62_11880 66c60863df3d2f0f2d205f2056ac371e 280 Gene3D G3DSA:3.40.190.10 116 221 2.0E-65 T 23-10-2018 CDG62_04325 fc2a015f031e9ebafdccb3acb55eb9a7 152 Gene3D G3DSA:3.30.700.10 5 147 1.1E-24 T 23-10-2018 CDG62_04325 fc2a015f031e9ebafdccb3acb55eb9a7 152 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_04325 fc2a015f031e9ebafdccb3acb55eb9a7 152 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 1.9E-11 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_04325 fc2a015f031e9ebafdccb3acb55eb9a7 152 SUPERFAMILY SSF54523 5 137 2.51E-26 T 23-10-2018 CDG62_04325 fc2a015f031e9ebafdccb3acb55eb9a7 152 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 4.1E-10 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_04325 fc2a015f031e9ebafdccb3acb55eb9a7 152 PRINTS PR00813 Bacterial general secretion pathway protein G signature 4 29 8.0E-14 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG62_04325 fc2a015f031e9ebafdccb3acb55eb9a7 152 PRINTS PR00813 Bacterial general secretion pathway protein G signature 40 58 8.0E-14 T 23-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CDG62_04325 fc2a015f031e9ebafdccb3acb55eb9a7 152 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 26 118 4.3E-16 T 23-10-2018 IPR031982 Type IV minor pilin ComP CDG62_12365 8115b825f35265510df96bb27800eff5 100 Gene3D G3DSA:3.40.120.10 2 83 7.6E-24 T 23-10-2018 CDG62_12365 8115b825f35265510df96bb27800eff5 100 SUPERFAMILY SSF53738 2 81 5.1E-22 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_12365 8115b825f35265510df96bb27800eff5 100 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 81 1.1E-22 T 23-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_06130 af274ac6b0a8bd7503e0b6c657f3638b 112 Gene3D G3DSA:2.30.30.40 40 112 3.0E-32 T 23-10-2018 CDG62_06130 af274ac6b0a8bd7503e0b6c657f3638b 112 Gene3D G3DSA:2.20.25.10 1 39 1.1E-18 T 23-10-2018 CDG62_06130 af274ac6b0a8bd7503e0b6c657f3638b 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 112 1.9E-47 T 23-10-2018 IPR004624 PhnA protein CDG62_06130 af274ac6b0a8bd7503e0b6c657f3638b 112 Pfam PF08274 PhnA Zinc-Ribbon 2 30 6.2E-16 T 23-10-2018 IPR013987 PhnA protein, N-terminal CDG62_06130 af274ac6b0a8bd7503e0b6c657f3638b 112 Pfam PF03831 PhnA domain 42 112 4.0E-33 T 23-10-2018 IPR013988 PhnA protein, C-terminal CDG62_06130 af274ac6b0a8bd7503e0b6c657f3638b 112 SUPERFAMILY SSF82057 37 112 4.58E-27 T 23-10-2018 CDG62_06130 af274ac6b0a8bd7503e0b6c657f3638b 112 SUPERFAMILY SSF57783 1 37 4.93E-14 T 23-10-2018 CDG62_10415 248e67668207607ce19c01930037c3ea 386 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 376 2.6E-105 T 23-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CDG62_10415 248e67668207607ce19c01930037c3ea 386 SUPERFAMILY SSF56796 1 385 1.14E-109 T 23-10-2018 CDG62_10415 248e67668207607ce19c01930037c3ea 386 Gene3D G3DSA:3.40.50.1970 1 185 2.1E-48 T 23-10-2018 CDG62_10415 248e67668207607ce19c01930037c3ea 386 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CDG62_10415 248e67668207607ce19c01930037c3ea 386 Gene3D G3DSA:1.20.1090.10 187 386 1.2E-57 T 23-10-2018 CDG62_06395 7795a38fe86708dad1cda8a29b02b186 234 SUPERFAMILY SSF48008 84 218 2.22E-23 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG62_06395 7795a38fe86708dad1cda8a29b02b186 234 SUPERFAMILY SSF46785 11 80 7.24E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_06395 7795a38fe86708dad1cda8a29b02b186 234 Gene3D G3DSA:1.10.10.10 7 77 1.1E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_06395 7795a38fe86708dad1cda8a29b02b186 234 SMART SM00895 86 211 1.2E-10 T 23-10-2018 IPR011711 GntR, C-terminal CDG62_06395 7795a38fe86708dad1cda8a29b02b186 234 Gene3D G3DSA:1.20.120.530 82 220 7.7E-24 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG62_06395 7795a38fe86708dad1cda8a29b02b186 234 SMART SM00345 18 76 1.3E-12 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_06395 7795a38fe86708dad1cda8a29b02b186 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 4.4E-16 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_06395 7795a38fe86708dad1cda8a29b02b186 234 Pfam PF07729 FCD domain 86 210 6.4E-18 T 23-10-2018 IPR011711 GntR, C-terminal CDG62_05620 1a9d351f770b3f43205cf91efe06baca 624 SUPERFAMILY SSF53649 258 575 1.03E-57 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG62_05620 1a9d351f770b3f43205cf91efe06baca 624 Pfam PF00884 Sulfatase 262 539 1.4E-34 T 23-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CDG62_05620 1a9d351f770b3f43205cf91efe06baca 624 Gene3D G3DSA:3.40.720.10 252 575 3.2E-59 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG62_05620 1a9d351f770b3f43205cf91efe06baca 624 PIRSF PIRSF004950 12 624 2.1E-189 T 23-10-2018 IPR012159 Inner membrane protein YejM CDG62_05620 1a9d351f770b3f43205cf91efe06baca 624 Pfam PF11893 Domain of unknown function (DUF3413) 20 252 2.5E-51 T 23-10-2018 IPR024588 Inner membrane protein YejM, N-terminal CDG62_08530 19a1ea804e6a0f0e4ebdf23921321dc5 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 4.5E-18 T 23-10-2018 IPR000813 7Fe ferredoxin GO:0009055 CDG62_08530 19a1ea804e6a0f0e4ebdf23921321dc5 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 4.5E-18 T 23-10-2018 IPR000813 7Fe ferredoxin GO:0009055 CDG62_08530 19a1ea804e6a0f0e4ebdf23921321dc5 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 4.5E-18 T 23-10-2018 IPR000813 7Fe ferredoxin GO:0009055 CDG62_08530 19a1ea804e6a0f0e4ebdf23921321dc5 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 1.1E-18 T 23-10-2018 IPR022569 Ferredoxin, C-terminal CDG62_08530 19a1ea804e6a0f0e4ebdf23921321dc5 107 SUPERFAMILY SSF54862 3 100 9.86E-25 T 23-10-2018 CDG62_08530 19a1ea804e6a0f0e4ebdf23921321dc5 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG62_08530 19a1ea804e6a0f0e4ebdf23921321dc5 107 Gene3D G3DSA:3.30.70.20 2 102 1.0E-32 T 23-10-2018 CDG62_08530 19a1ea804e6a0f0e4ebdf23921321dc5 107 Pfam PF00037 4Fe-4S binding domain 34 55 5.6E-7 T 23-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDG62_06765 f79efd2bca1f01b07234fc5fecdd9cf9 126 SUPERFAMILY SSF50692 1 122 1.03E-44 T 23-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDG62_06765 f79efd2bca1f01b07234fc5fecdd9cf9 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 64.078 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CDG62_06765 f79efd2bca1f01b07234fc5fecdd9cf9 126 Pfam PF02261 Aspartate decarboxylase 1 114 2.5E-44 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CDG62_06765 f79efd2bca1f01b07234fc5fecdd9cf9 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 1.0E-58 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CDG62_06765 f79efd2bca1f01b07234fc5fecdd9cf9 126 PIRSF PIRSF006246 1 125 2.1E-46 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CDG62_06765 f79efd2bca1f01b07234fc5fecdd9cf9 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 2.4E-46 T 23-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CDG62_06765 f79efd2bca1f01b07234fc5fecdd9cf9 126 Gene3D G3DSA:2.40.40.20 1 126 9.1E-50 T 23-10-2018 CDG62_18125 0c78d709760bd6ccddcfcbb379dfce1e 448 Gene3D G3DSA:3.90.190.20 303 443 5.2E-42 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG62_18125 0c78d709760bd6ccddcfcbb379dfce1e 448 SUPERFAMILY SSF51984 10 93 1.01E-16 T 23-10-2018 CDG62_18125 0c78d709760bd6ccddcfcbb379dfce1e 448 SUPERFAMILY SSF53244 302 447 1.9E-42 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG62_18125 0c78d709760bd6ccddcfcbb379dfce1e 448 Gene3D G3DSA:3.40.1190.10 94 302 2.8E-60 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG62_18125 0c78d709760bd6ccddcfcbb379dfce1e 448 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 447 33.388 T 23-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG62_18125 0c78d709760bd6ccddcfcbb379dfce1e 448 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 445 7.6E-119 T 23-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CDG62_18125 0c78d709760bd6ccddcfcbb379dfce1e 448 Pfam PF08245 Mur ligase middle domain 110 282 8.9E-26 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDG62_18125 0c78d709760bd6ccddcfcbb379dfce1e 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 304 378 3.7E-7 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CDG62_18125 0c78d709760bd6ccddcfcbb379dfce1e 448 SUPERFAMILY SSF53623 98 300 4.73E-51 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG62_18125 0c78d709760bd6ccddcfcbb379dfce1e 448 Gene3D G3DSA:3.40.50.720 8 93 1.5E-22 T 23-10-2018 CDG62_12985 58caa283a521ed40fe273341d649cd72 189 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 65 1.3E-9 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDG62_12985 58caa283a521ed40fe273341d649cd72 189 SUPERFAMILY SSF52374 9 174 7.41E-24 T 23-10-2018 CDG62_12985 58caa283a521ed40fe273341d649cd72 189 Pfam PF01467 Cytidylyltransferase-like 9 61 9.6E-8 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDG62_12985 58caa283a521ed40fe273341d649cd72 189 Gene3D G3DSA:3.40.50.620 1 187 4.9E-55 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_15610 73263e8f47204ed262e86b889b8d9ab5 328 PRINTS PR00075 Fatty acid desaturase family 1 signature 75 95 2.6E-28 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG62_15610 73263e8f47204ed262e86b889b8d9ab5 328 PRINTS PR00075 Fatty acid desaturase family 1 signature 30 50 2.6E-28 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG62_15610 73263e8f47204ed262e86b889b8d9ab5 328 PRINTS PR00075 Fatty acid desaturase family 1 signature 250 264 2.6E-28 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG62_15610 73263e8f47204ed262e86b889b8d9ab5 328 PRINTS PR00075 Fatty acid desaturase family 1 signature 207 228 2.6E-28 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG62_15610 73263e8f47204ed262e86b889b8d9ab5 328 PRINTS PR00075 Fatty acid desaturase family 1 signature 112 141 2.6E-28 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG62_15610 73263e8f47204ed262e86b889b8d9ab5 328 Pfam PF00487 Fatty acid desaturase 52 273 9.9E-21 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CDG62_12015 5de81349af6d111b3c9628774072d704 419 Gene3D G3DSA:3.20.20.70 26 266 4.9E-11 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_12015 5de81349af6d111b3c9628774072d704 419 SUPERFAMILY SSF102114 44 260 3.92E-15 T 23-10-2018 CDG62_12015 5de81349af6d111b3c9628774072d704 419 SUPERFAMILY SSF47781 302 381 9.67E-12 T 23-10-2018 IPR010994 RuvA domain 2-like CDG62_12015 5de81349af6d111b3c9628774072d704 419 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 5 412 2.6E-201 T 23-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative CDG62_11590 8102d701f7f3a96a1d43140b50876ba1 292 Gene3D G3DSA:3.60.130.10 7 284 1.3E-41 T 23-10-2018 CDG62_11590 8102d701f7f3a96a1d43140b50876ba1 292 SUPERFAMILY SSF51197 5 281 6.87E-34 T 23-10-2018 CDG62_11590 8102d701f7f3a96a1d43140b50876ba1 292 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 9 270 4.1E-27 T 23-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 CDG62_04865 797642487776dcd6eb7c869a222c80c2 760 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 605 751 2.3E-13 T 23-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDG62_14000 6266bbde7395755c18efc035d6ff0e16 307 SUPERFAMILY SSF111331 6 306 2.75E-56 T 23-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CDG62_14000 6266bbde7395755c18efc035d6ff0e16 307 Gene3D G3DSA:2.60.200.40 140 295 1.0E-17 T 23-10-2018 CDG62_14000 6266bbde7395755c18efc035d6ff0e16 307 SMART SM00046 7 139 7.5E-6 T 23-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CDG62_14000 6266bbde7395755c18efc035d6ff0e16 307 Gene3D G3DSA:3.40.50.10330 2 139 4.1E-26 T 23-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 CDG62_14000 6266bbde7395755c18efc035d6ff0e16 307 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 135 1.0E-23 T 23-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CDG62_13290 5a60d52fa3808c36aefff5f35e6924b1 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 23-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 CDG62_13290 5a60d52fa3808c36aefff5f35e6924b1 54 PIRSF PIRSF000071 1 54 6.8E-24 T 23-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 CDG62_13290 5a60d52fa3808c36aefff5f35e6924b1 54 SUPERFAMILY SSF57802 1 53 6.56E-21 T 23-10-2018 CDG62_13290 5a60d52fa3808c36aefff5f35e6924b1 54 PRINTS PR00163 Rubredoxin signature 33 49 3.3E-8 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 CDG62_13290 5a60d52fa3808c36aefff5f35e6924b1 54 PRINTS PR00163 Rubredoxin signature 3 19 3.3E-8 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 CDG62_13290 5a60d52fa3808c36aefff5f35e6924b1 54 Pfam PF00301 Rubredoxin 3 49 4.1E-22 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 CDG62_13290 5a60d52fa3808c36aefff5f35e6924b1 54 Gene3D G3DSA:2.20.28.10 1 54 2.6E-26 T 23-10-2018 CDG62_05205 56bd984002dccee9bb08c612b07a8bb4 267 Gene3D G3DSA:3.40.50.720 1 267 1.1E-60 T 23-10-2018 CDG62_05205 56bd984002dccee9bb08c612b07a8bb4 267 PIRSF PIRSF000094 3 262 6.4E-112 T 23-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDG62_05205 56bd984002dccee9bb08c612b07a8bb4 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.5E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_05205 56bd984002dccee9bb08c612b07a8bb4 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.5E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_05205 56bd984002dccee9bb08c612b07a8bb4 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.5E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_05205 56bd984002dccee9bb08c612b07a8bb4 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 2.5E-8 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_05205 56bd984002dccee9bb08c612b07a8bb4 267 SUPERFAMILY SSF51735 8 257 2.29E-61 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_05205 56bd984002dccee9bb08c612b07a8bb4 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 255 5.4E-85 T 23-10-2018 CDG62_15200 65d7103a52b9099b6d459789cc48b66a 446 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 445 4.0E-249 T 23-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CDG62_15200 65d7103a52b9099b6d459789cc48b66a 446 Gene3D G3DSA:3.75.10.20 1 446 1.2E-206 T 23-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CDG62_15200 65d7103a52b9099b6d459789cc48b66a 446 Pfam PF04996 Succinylarginine dihydrolase 4 445 4.3E-219 T 23-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CDG62_15200 65d7103a52b9099b6d459789cc48b66a 446 SUPERFAMILY SSF55909 4 446 4.22E-205 T 23-10-2018 CDG62_15200 65d7103a52b9099b6d459789cc48b66a 446 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 446 59.593 T 23-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CDG62_03445 d2e1e9dabb628dff87aa9e9bbbf95c59 256 Pfam PF13557 Putative MetA-pathway of phenol degradation 27 256 4.8E-19 T 23-10-2018 IPR025737 MetA-pathway of phenol degradation, putative CDG62_06325 28f6c8cac0a70a9853a785d21c5d28ef 381 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 196 381 4.7E-30 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_06325 28f6c8cac0a70a9853a785d21c5d28ef 381 SUPERFAMILY SSF161098 176 364 5.1E-22 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_06325 28f6c8cac0a70a9853a785d21c5d28ef 381 Gene3D G3DSA:1.10.3720.10 168 379 7.7E-21 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_06325 28f6c8cac0a70a9853a785d21c5d28ef 381 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 60 6.7E-8 T 23-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDG62_03300 cfede780a865ec6200da09d3a07557da 146 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 1.9E-48 T 23-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CDG62_03300 cfede780a865ec6200da09d3a07557da 146 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 31.594 T 23-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CDG62_03300 cfede780a865ec6200da09d3a07557da 146 SUPERFAMILY SSF69500 1 144 5.76E-53 T 23-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CDG62_03300 cfede780a865ec6200da09d3a07557da 146 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 8.5E-54 T 23-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CDG62_03300 cfede780a865ec6200da09d3a07557da 146 Gene3D G3DSA:3.50.80.10 1 145 8.7E-52 T 23-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CDG62_18975 53db331e45769e1d19abdc365106ef32 225 Gene3D G3DSA:1.10.10.60 1 52 4.5E-24 T 23-10-2018 CDG62_18975 53db331e45769e1d19abdc365106ef32 225 Gene3D G3DSA:1.10.357.10 53 223 2.2E-34 T 23-10-2018 CDG62_18975 53db331e45769e1d19abdc365106ef32 225 SUPERFAMILY SSF46689 2 76 4.41E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_12335 a70a8b8e31b4fa4dc25c7dddb9c1fcf0 277 Gene3D G3DSA:3.30.1150.10 176 275 7.1E-25 T 23-10-2018 CDG62_12335 a70a8b8e31b4fa4dc25c7dddb9c1fcf0 277 SUPERFAMILY SSF74653 193 273 3.53E-23 T 23-10-2018 CDG62_12335 a70a8b8e31b4fa4dc25c7dddb9c1fcf0 277 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 199 275 1.4E-22 T 23-10-2018 IPR006260 TonB/TolA, C-terminal CDG62_12335 a70a8b8e31b4fa4dc25c7dddb9c1fcf0 277 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 197 275 3.1E-23 T 23-10-2018 IPR037682 TonB, C-terminal GO:0055085 CDG62_15785 2122555e7be6bb6407deef1ae5b0cdd4 1198 SUPERFAMILY SSF52540 993 1175 4.42E-14 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_15785 2122555e7be6bb6407deef1ae5b0cdd4 1198 Pfam PF13476 AAA domain 5 287 8.8E-23 T 23-10-2018 IPR038729 Rad50/SbcC-type AAA domain CDG62_15785 2122555e7be6bb6407deef1ae5b0cdd4 1198 SUPERFAMILY SSF52540 1 353 4.88E-25 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_15785 2122555e7be6bb6407deef1ae5b0cdd4 1198 Gene3D G3DSA:3.40.50.300 1 324 2.0E-39 T 23-10-2018 CDG62_15785 2122555e7be6bb6407deef1ae5b0cdd4 1198 Gene3D G3DSA:3.40.50.300 932 1198 1.2E-24 T 23-10-2018 CDG62_15785 2122555e7be6bb6407deef1ae5b0cdd4 1198 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1084 1156 9.6E-11 T 23-10-2018 CDG62_08615 4cf6178823e7f820b52ef1879e03c6d6 300 SUPERFAMILY SSF53335 67 290 1.11E-35 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_08615 4cf6178823e7f820b52ef1879e03c6d6 300 Gene3D G3DSA:3.40.50.150 103 299 1.2E-52 T 23-10-2018 CDG62_08615 4cf6178823e7f820b52ef1879e03c6d6 300 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 297 31.286 T 23-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CDG62_08615 4cf6178823e7f820b52ef1879e03c6d6 300 PIRSF PIRSF000401 1 299 1.6E-81 T 23-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CDG62_08615 4cf6178823e7f820b52ef1879e03c6d6 300 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 291 2.9E-83 T 23-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CDG62_08615 4cf6178823e7f820b52ef1879e03c6d6 300 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 297 4.3E-87 T 23-10-2018 CDG62_08130 5f61589597441009018e0ac58e09d807 562 Gene3D G3DSA:3.40.50.12780 9 448 1.9E-122 T 23-10-2018 CDG62_08130 5f61589597441009018e0ac58e09d807 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 467 542 1.2E-16 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG62_08130 5f61589597441009018e0ac58e09d807 562 Gene3D G3DSA:3.30.300.30 452 557 1.9E-29 T 23-10-2018 CDG62_08130 5f61589597441009018e0ac58e09d807 562 Pfam PF00501 AMP-binding enzyme 26 458 1.1E-108 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG62_08130 5f61589597441009018e0ac58e09d807 562 SUPERFAMILY SSF56801 16 554 1.96E-153 T 23-10-2018 CDG62_08130 5f61589597441009018e0ac58e09d807 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 208 219 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG62_18105 5e57110c3b09e7e68c430ec16bdfebb0 265 SUPERFAMILY SSF56300 10 253 2.92E-54 T 23-10-2018 CDG62_18105 5e57110c3b09e7e68c430ec16bdfebb0 265 Gene3D G3DSA:3.60.21.10 2 263 6.6E-61 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like CDG62_18105 5e57110c3b09e7e68c430ec16bdfebb0 265 Pfam PF00149 Calcineurin-like phosphoesterase 10 196 9.7E-16 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDG62_18105 5e57110c3b09e7e68c430ec16bdfebb0 265 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 203 251 3.0E-10 T 23-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 CDG62_18105 5e57110c3b09e7e68c430ec16bdfebb0 265 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 9 251 33.084 T 23-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CDG62_00525 6b27d95c18ef6d4aba46127da439bcd4 397 SUPERFAMILY SSF47413 56 117 2.41E-5 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG62_00525 6b27d95c18ef6d4aba46127da439bcd4 397 SMART SM00530 62 116 8.8E-4 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_00525 6b27d95c18ef6d4aba46127da439bcd4 397 Pfam PF06114 IrrE N-terminal-like domain 254 372 5.2E-13 T 23-10-2018 IPR010359 IrrE N-terminal-like domain CDG62_15860 951a7bc573ccaadb0b416dbe7a2e1579 216 SUPERFAMILY SSF103088 102 212 3.66E-37 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG62_15860 951a7bc573ccaadb0b416dbe7a2e1579 216 Gene3D G3DSA:3.30.1330.60 74 215 5.0E-46 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG62_15860 951a7bc573ccaadb0b416dbe7a2e1579 216 Pfam PF00691 OmpA family 111 206 6.2E-24 T 23-10-2018 IPR006665 OmpA-like domain CDG62_15860 951a7bc573ccaadb0b416dbe7a2e1579 216 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 175 194 1.6E-7 T 23-10-2018 CDG62_15860 951a7bc573ccaadb0b416dbe7a2e1579 216 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 157 174 1.6E-7 T 23-10-2018 CDG62_15860 951a7bc573ccaadb0b416dbe7a2e1579 216 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 195 215 1.6E-7 T 23-10-2018 CDG62_15860 951a7bc573ccaadb0b416dbe7a2e1579 216 PRINTS PR01021 OMPA domain signature 112 134 1.9E-15 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_15860 951a7bc573ccaadb0b416dbe7a2e1579 216 PRINTS PR01021 OMPA domain signature 142 157 1.9E-15 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_15860 951a7bc573ccaadb0b416dbe7a2e1579 216 PRINTS PR01021 OMPA domain signature 157 173 1.9E-15 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_15860 951a7bc573ccaadb0b416dbe7a2e1579 216 ProSitePatterns PS01068 OmpA-like domain. 144 188 - T 23-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CDG62_18850 e44bcf6b45f8ed1d66a50abd2e2a6d23 339 PRINTS PR01713 Nucleotide sugar epimerase signature 296 313 4.2E-6 T 23-10-2018 CDG62_18850 e44bcf6b45f8ed1d66a50abd2e2a6d23 339 PRINTS PR01713 Nucleotide sugar epimerase signature 30 46 4.2E-6 T 23-10-2018 CDG62_18850 e44bcf6b45f8ed1d66a50abd2e2a6d23 339 PRINTS PR01713 Nucleotide sugar epimerase signature 232 247 4.2E-6 T 23-10-2018 CDG62_18850 e44bcf6b45f8ed1d66a50abd2e2a6d23 339 PRINTS PR01713 Nucleotide sugar epimerase signature 257 272 4.2E-6 T 23-10-2018 CDG62_18850 e44bcf6b45f8ed1d66a50abd2e2a6d23 339 Gene3D G3DSA:3.40.50.720 4 275 1.0E-132 T 23-10-2018 CDG62_18850 e44bcf6b45f8ed1d66a50abd2e2a6d23 339 SUPERFAMILY SSF51735 1 337 3.47E-89 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_18850 e44bcf6b45f8ed1d66a50abd2e2a6d23 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 336 4.0E-131 T 23-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 CDG62_18850 e44bcf6b45f8ed1d66a50abd2e2a6d23 339 Gene3D G3DSA:3.90.25.10 195 330 1.0E-132 T 23-10-2018 CDG62_18850 e44bcf6b45f8ed1d66a50abd2e2a6d23 339 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 263 5.8E-57 T 23-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDG62_19175 4510e1daba359e669a80bae9e40ca663 94 SUPERFAMILY SSF55729 10 92 6.52E-22 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_19175 4510e1daba359e669a80bae9e40ca663 94 Gene3D G3DSA:3.40.630.30 2 94 6.7E-23 T 23-10-2018 CDG62_19175 4510e1daba359e669a80bae9e40ca663 94 Pfam PF14542 GCN5-related N-acetyl-transferase 17 91 3.1E-20 T 23-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase CDG62_18215 fbedbb4cdb308c2fa16b017db1acbc96 135 SUPERFAMILY SSF102400 1 134 4.45E-34 T 23-10-2018 IPR036768 DNA polymerase III subunit chi superfamily CDG62_18215 fbedbb4cdb308c2fa16b017db1acbc96 135 Gene3D G3DSA:3.40.50.10110 1 134 3.5E-33 T 23-10-2018 IPR036768 DNA polymerase III subunit chi superfamily CDG62_18215 fbedbb4cdb308c2fa16b017db1acbc96 135 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 130 1.6E-32 T 23-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CDG62_13425 2a8dc9bb840093b050f0962774520746 553 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 546 6.9E-226 T 23-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CDG62_13425 2a8dc9bb840093b050f0962774520746 553 Pfam PF02652 L-lactate permease 17 544 1.1E-215 T 23-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CDG62_14330 01038c4879b151b545ef6d1f58344cd0 173 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 7 102 4.6E-10 T 23-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CDG62_14330 01038c4879b151b545ef6d1f58344cd0 173 Pfam PF03061 Thioesterase superfamily 32 103 1.7E-18 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDG62_14330 01038c4879b151b545ef6d1f58344cd0 173 SUPERFAMILY SSF54637 13 158 2.03E-44 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_14330 01038c4879b151b545ef6d1f58344cd0 173 Gene3D G3DSA:3.10.129.10 7 161 2.7E-57 T 23-10-2018 CDG62_00575 f195c8e784e312987760a7906e8a3c01 522 Gene3D G3DSA:3.40.50.300 340 518 8.0E-32 T 23-10-2018 CDG62_00575 f195c8e784e312987760a7906e8a3c01 522 SMART SM00382 361 522 4.7E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_00575 f195c8e784e312987760a7906e8a3c01 522 SMART SM00382 29 353 1.0 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_00575 f195c8e784e312987760a7906e8a3c01 522 SUPERFAMILY SSF52540 8 224 3.33E-29 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00575 f195c8e784e312987760a7906e8a3c01 522 Pfam PF00005 ABC transporter 21 171 1.5E-17 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_00575 f195c8e784e312987760a7906e8a3c01 522 SUPERFAMILY SSF52540 349 513 4.8E-29 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00575 f195c8e784e312987760a7906e8a3c01 522 Pfam PF00005 ABC transporter 353 478 6.9E-13 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_00575 f195c8e784e312987760a7906e8a3c01 522 Gene3D G3DSA:3.40.50.300 9 267 1.1E-38 T 23-10-2018 CDG62_17540 903a103c9eaf0bc8dcdace5717dad395 594 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 65 587 2.2E-124 T 23-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CDG62_17540 903a103c9eaf0bc8dcdace5717dad395 594 Gene3D G3DSA:3.40.50.300 96 327 1.7E-51 T 23-10-2018 CDG62_17540 903a103c9eaf0bc8dcdace5717dad395 594 Pfam PF13538 UvrD-like helicase C-terminal domain 517 562 4.8E-13 T 23-10-2018 IPR027785 UvrD-like helicase C-terminal domain CDG62_17540 903a103c9eaf0bc8dcdace5717dad395 594 Pfam PF13604 AAA domain 132 323 2.1E-31 T 23-10-2018 CDG62_17540 903a103c9eaf0bc8dcdace5717dad395 594 SUPERFAMILY SSF52540 130 569 8.13E-50 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17540 903a103c9eaf0bc8dcdace5717dad395 594 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 12 586 39.833 T 23-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CDG62_17540 903a103c9eaf0bc8dcdace5717dad395 594 Gene3D G3DSA:3.40.50.300 448 577 2.0E-24 T 23-10-2018 CDG62_12920 67a94058a34fbf286c214f4e2f76ef73 353 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 3.3E-122 T 23-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 CDG62_12920 67a94058a34fbf286c214f4e2f76ef73 353 Pfam PF12857 TOBE-like domain 287 342 6.7E-8 T 23-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 CDG62_12920 67a94058a34fbf286c214f4e2f76ef73 353 SUPERFAMILY SSF52540 3 243 4.94E-86 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12920 67a94058a34fbf286c214f4e2f76ef73 353 SMART SM00382 27 214 1.6E-20 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_12920 67a94058a34fbf286c214f4e2f76ef73 353 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_12920 67a94058a34fbf286c214f4e2f76ef73 353 SUPERFAMILY SSF50331 240 348 1.36E-5 T 23-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal CDG62_12920 67a94058a34fbf286c214f4e2f76ef73 353 Gene3D G3DSA:3.40.50.300 2 298 4.1E-81 T 23-10-2018 CDG62_12920 67a94058a34fbf286c214f4e2f76ef73 353 Pfam PF00005 ABC transporter 18 164 4.1E-36 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_12935 cbfd7f4d91d403ccfbb04303932a6327 249 SUPERFAMILY SSF56925 38 249 7.85E-9 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG62_12935 cbfd7f4d91d403ccfbb04303932a6327 249 Gene3D G3DSA:2.40.160.170 23 249 6.9E-83 T 23-10-2018 CDG62_17705 5c0bd062a9c0dba52be302fe92dce640 408 Gene3D G3DSA:1.20.81.30 61 176 1.1E-30 T 23-10-2018 CDG62_17705 5c0bd062a9c0dba52be302fe92dce640 408 Gene3D G3DSA:1.20.81.30 261 371 3.5E-27 T 23-10-2018 CDG62_17705 5c0bd062a9c0dba52be302fe92dce640 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 70 82 2.7E-18 T 23-10-2018 IPR003004 GspF/PilC family CDG62_17705 5c0bd062a9c0dba52be302fe92dce640 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 408 2.7E-18 T 23-10-2018 IPR003004 GspF/PilC family CDG62_17705 5c0bd062a9c0dba52be302fe92dce640 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 373 387 2.7E-18 T 23-10-2018 IPR003004 GspF/PilC family CDG62_17705 5c0bd062a9c0dba52be302fe92dce640 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 169 197 2.7E-18 T 23-10-2018 IPR003004 GspF/PilC family CDG62_17705 5c0bd062a9c0dba52be302fe92dce640 408 Pfam PF00482 Type II secretion system (T2SS), protein F 279 400 6.4E-30 T 23-10-2018 IPR018076 Type II secretion system F domain CDG62_17705 5c0bd062a9c0dba52be302fe92dce640 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 197 4.9E-31 T 23-10-2018 IPR018076 Type II secretion system F domain CDG62_17705 5c0bd062a9c0dba52be302fe92dce640 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 169 197 - T 23-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CDG62_18100 36daf7bbcbde13ca50040bd1db06a56e 206 Pfam PF00293 NUDIX domain 55 175 9.8E-11 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG62_18100 36daf7bbcbde13ca50040bd1db06a56e 206 SUPERFAMILY SSF55811 24 199 2.98E-38 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG62_18100 36daf7bbcbde13ca50040bd1db06a56e 206 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 13 197 2.0E-41 T 23-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CDG62_18100 36daf7bbcbde13ca50040bd1db06a56e 206 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDG62_18100 36daf7bbcbde13ca50040bd1db06a56e 206 Gene3D G3DSA:3.90.79.10 3 205 3.8E-51 T 23-10-2018 CDG62_04155 aac84d1df1e51d87419f4aa81dad7bdf 469 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 42 464 2.3E-121 T 23-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_04155 aac84d1df1e51d87419f4aa81dad7bdf 469 Gene3D G3DSA:3.40.1190.10 94 321 3.2E-83 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG62_04155 aac84d1df1e51d87419f4aa81dad7bdf 469 SUPERFAMILY SSF53623 114 321 2.49E-51 T 23-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 CDG62_04155 aac84d1df1e51d87419f4aa81dad7bdf 469 Gene3D G3DSA:3.40.1390.10 1 93 7.4E-35 T 23-10-2018 CDG62_04155 aac84d1df1e51d87419f4aa81dad7bdf 469 SUPERFAMILY SSF53244 325 464 2.52E-25 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG62_04155 aac84d1df1e51d87419f4aa81dad7bdf 469 Gene3D G3DSA:3.90.190.20 323 469 3.2E-41 T 23-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CDG62_04155 aac84d1df1e51d87419f4aa81dad7bdf 469 Pfam PF08245 Mur ligase middle domain 120 303 7.2E-43 T 23-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 CDG62_04155 aac84d1df1e51d87419f4aa81dad7bdf 469 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 399 8.2E-13 T 23-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 CDG62_04155 aac84d1df1e51d87419f4aa81dad7bdf 469 SUPERFAMILY SSF63418 13 108 1.1E-22 T 23-10-2018 IPR035911 MurE/MurF, N-terminal CDG62_04155 aac84d1df1e51d87419f4aa81dad7bdf 469 Pfam PF01225 Mur ligase family, catalytic domain 36 103 6.0E-7 T 23-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CDG62_04155 aac84d1df1e51d87419f4aa81dad7bdf 469 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 14 466 30.633 T 23-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_03095 e105561dbb9655a62dc301a06e85adea 245 Pfam PF01925 Sulfite exporter TauE/SafE 6 237 1.4E-27 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDG62_03900 c912948fd8829dae1e40a90c2b9c3dde 546 SUPERFAMILY SSF52540 1 478 3.75E-19 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_03900 c912948fd8829dae1e40a90c2b9c3dde 546 Gene3D G3DSA:3.40.50.300 1 234 1.7E-7 T 23-10-2018 CDG62_03900 c912948fd8829dae1e40a90c2b9c3dde 546 Gene3D G3DSA:3.40.50.300 266 485 4.2E-9 T 23-10-2018 CDG62_03900 c912948fd8829dae1e40a90c2b9c3dde 546 Pfam PF13175 AAA ATPase domain 12 457 6.8E-16 T 23-10-2018 CDG62_06060 1f7c44f1fa9fa5c76899cb8d8f0b8507 385 SMART SM00953 218 372 5.4E-9 T 23-10-2018 IPR014914 RES domain CDG62_06060 1f7c44f1fa9fa5c76899cb8d8f0b8507 385 Pfam PF08808 RES domain 204 368 1.4E-21 T 23-10-2018 IPR014914 RES domain CDG62_15110 8a8c530715b070abc610cb95e9f15554 486 SMART SM00710 137 158 1500.0 T 23-10-2018 IPR006626 Parallel beta-helix repeat CDG62_15110 8a8c530715b070abc610cb95e9f15554 486 SMART SM00710 194 215 110.0 T 23-10-2018 IPR006626 Parallel beta-helix repeat CDG62_15110 8a8c530715b070abc610cb95e9f15554 486 SMART SM00710 245 265 3700.0 T 23-10-2018 IPR006626 Parallel beta-helix repeat CDG62_15110 8a8c530715b070abc610cb95e9f15554 486 SMART SM00710 288 309 65.0 T 23-10-2018 IPR006626 Parallel beta-helix repeat CDG62_15110 8a8c530715b070abc610cb95e9f15554 486 SMART SM00710 159 182 2.0 T 23-10-2018 IPR006626 Parallel beta-helix repeat CDG62_15110 8a8c530715b070abc610cb95e9f15554 486 SMART SM00710 267 287 6300.0 T 23-10-2018 IPR006626 Parallel beta-helix repeat CDG62_15110 8a8c530715b070abc610cb95e9f15554 486 Gene3D G3DSA:2.160.20.10 59 339 6.2E-13 T 23-10-2018 IPR012334 Pectin lyase fold CDG62_15110 8a8c530715b070abc610cb95e9f15554 486 SUPERFAMILY SSF51126 11 339 1.96E-28 T 23-10-2018 IPR011050 Pectin lyase fold/virulence factor CDG62_15110 8a8c530715b070abc610cb95e9f15554 486 Pfam PF13229 Right handed beta helix region 123 255 6.0E-11 T 23-10-2018 IPR039448 Right handed beta helix domain CDG62_09740 5e0ee6c3f234b30b9245d311c2c55541 171 SUPERFAMILY SSF53955 2 167 2.22E-44 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG62_09740 5e0ee6c3f234b30b9245d311c2c55541 171 Pfam PF09374 Predicted Peptidoglycan domain 99 160 1.0E-9 T 23-10-2018 IPR018537 Peptidoglycan binding domain CDG62_09740 5e0ee6c3f234b30b9245d311c2c55541 171 Pfam PF05838 Glycosyl hydrolase 108 8 95 7.5E-19 T 23-10-2018 IPR008565 Protein of unknown function DUF847 CDG62_09740 5e0ee6c3f234b30b9245d311c2c55541 171 Gene3D G3DSA:1.20.141.10 2 171 7.8E-52 T 23-10-2018 CDG62_06600 42d651b85c19e8bc8fb7654d317aa132 203 SMART SM00014 80 189 8.5E-20 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG62_06600 42d651b85c19e8bc8fb7654d317aa132 203 Pfam PF01569 PAP2 superfamily 90 190 4.5E-19 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG62_06600 42d651b85c19e8bc8fb7654d317aa132 203 Gene3D G3DSA:1.20.144.10 112 202 1.4E-22 T 23-10-2018 CDG62_06600 42d651b85c19e8bc8fb7654d317aa132 203 Gene3D G3DSA:1.20.144.10 3 111 2.3E-6 T 23-10-2018 CDG62_06600 42d651b85c19e8bc8fb7654d317aa132 203 SUPERFAMILY SSF48317 6 200 3.53E-37 T 23-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDG62_17190 04538d262b14970c81642946dcd535c1 216 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 186 7.8E-20 T 23-10-2018 CDG62_17190 04538d262b14970c81642946dcd535c1 216 Gene3D G3DSA:3.40.50.1000 3 211 2.4E-69 T 23-10-2018 IPR023214 HAD superfamily CDG62_17190 04538d262b14970c81642946dcd535c1 216 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 183 3.0E-33 T 23-10-2018 CDG62_17190 04538d262b14970c81642946dcd535c1 216 Gene3D G3DSA:1.20.1440.100 15 88 2.4E-69 T 23-10-2018 CDG62_17190 04538d262b14970c81642946dcd535c1 216 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 199 2.6E-38 T 23-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CDG62_17190 04538d262b14970c81642946dcd535c1 216 SUPERFAMILY SSF56784 1 210 3.17E-32 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_12910 767b2bf0b4666227872914c29c9ba2ca 277 Gene3D G3DSA:1.10.3720.10 13 272 3.0E-69 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_12910 767b2bf0b4666227872914c29c9ba2ca 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 7 270 3.1E-127 T 23-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 CDG62_12910 767b2bf0b4666227872914c29c9ba2ca 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 266 5.1E-95 T 23-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CDG62_12910 767b2bf0b4666227872914c29c9ba2ca 277 SUPERFAMILY SSF161098 14 264 4.86E-56 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_12910 767b2bf0b4666227872914c29c9ba2ca 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 272 3.0E-28 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_06500 18e7803578c79b2313bf112206743275 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 3.1E-50 T 23-10-2018 CDG62_06500 18e7803578c79b2313bf112206743275 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 3.1E-50 T 23-10-2018 CDG62_06500 18e7803578c79b2313bf112206743275 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 423 442 3.1E-50 T 23-10-2018 CDG62_06500 18e7803578c79b2313bf112206743275 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 3.1E-50 T 23-10-2018 CDG62_06500 18e7803578c79b2313bf112206743275 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 3.1E-50 T 23-10-2018 CDG62_06500 18e7803578c79b2313bf112206743275 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 3.1E-50 T 23-10-2018 CDG62_06500 18e7803578c79b2313bf112206743275 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 3.1E-50 T 23-10-2018 CDG62_06500 18e7803578c79b2313bf112206743275 629 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 1.4E-20 T 23-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06500 18e7803578c79b2313bf112206743275 629 Pfam PF00361 Proton-conducting membrane transporter 134 411 3.6E-84 T 23-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06500 18e7803578c79b2313bf112206743275 629 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 621 4.2E-204 T 23-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06500 18e7803578c79b2313bf112206743275 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 3.0E-8 T 23-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDG62_06500 18e7803578c79b2313bf112206743275 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 3.0E-8 T 23-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDG62_06500 18e7803578c79b2313bf112206743275 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 3.0E-8 T 23-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDG62_06500 18e7803578c79b2313bf112206743275 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 422 444 3.0E-8 T 23-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDG62_14245 a886d8136eb0eeecbfd6f7e174c4b901 261 SMART SM00342 176 258 9.9E-22 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_14245 a886d8136eb0eeecbfd6f7e174c4b901 261 SUPERFAMILY SSF51182 27 185 4.18E-9 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG62_14245 a886d8136eb0eeecbfd6f7e174c4b901 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 1.9E-6 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_14245 a886d8136eb0eeecbfd6f7e174c4b901 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 1.9E-6 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_14245 a886d8136eb0eeecbfd6f7e174c4b901 261 Gene3D G3DSA:1.10.10.60 160 261 1.2E-22 T 23-10-2018 CDG62_14245 a886d8136eb0eeecbfd6f7e174c4b901 261 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 254 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDG62_14245 a886d8136eb0eeecbfd6f7e174c4b901 261 SUPERFAMILY SSF46689 216 258 7.53E-9 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_14245 a886d8136eb0eeecbfd6f7e174c4b901 261 Pfam PF12833 Helix-turn-helix domain 182 258 5.6E-22 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_12500 dc453826ce8ca73f14e3d9ce8146e2b5 211 Pfam PF01810 LysE type translocator 18 208 1.3E-33 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_12500 dc453826ce8ca73f14e3d9ce8146e2b5 211 PIRSF PIRSF006324 3 211 1.9E-46 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_03225 197ba5eedd3d89c1994b37f772c2139c 258 Gene3D G3DSA:3.40.50.300 2 258 4.5E-80 T 23-10-2018 CDG62_03225 197ba5eedd3d89c1994b37f772c2139c 258 SUPERFAMILY SSF52540 8 252 1.42E-73 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_03225 197ba5eedd3d89c1994b37f772c2139c 258 Pfam PF00005 ABC transporter 22 182 1.6E-34 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_03225 197ba5eedd3d89c1994b37f772c2139c 258 PIRSF PIRSF039085 3 257 1.8E-118 T 23-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CDG62_03225 197ba5eedd3d89c1994b37f772c2139c 258 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_03225 197ba5eedd3d89c1994b37f772c2139c 258 SMART SM00382 31 230 7.4E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_15765 91db999a010d45baf8433aa220cbb724 306 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 6 295 1.5E-85 T 23-10-2018 IPR010099 Epimerase family protein SDR39U1 CDG62_15765 91db999a010d45baf8433aa220cbb724 306 Gene3D G3DSA:3.40.50.720 5 304 5.1E-73 T 23-10-2018 CDG62_15765 91db999a010d45baf8433aa220cbb724 306 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 225 2.6E-24 T 23-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDG62_15765 91db999a010d45baf8433aa220cbb724 306 SUPERFAMILY SSF51735 5 299 5.57E-41 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_15765 91db999a010d45baf8433aa220cbb724 306 Pfam PF08338 Domain of unknown function (DUF1731) 253 296 5.5E-18 T 23-10-2018 IPR013549 Domain of unknown function DUF1731 CDG62_16215 3fb7ee79dafc3135a8bbf1a11fd8b95b 449 Gene3D G3DSA:1.20.1250.20 21 434 4.3E-78 T 23-10-2018 CDG62_16215 3fb7ee79dafc3135a8bbf1a11fd8b95b 449 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 8 403 1.6E-129 T 23-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 CDG62_16215 3fb7ee79dafc3135a8bbf1a11fd8b95b 449 Pfam PF07690 Major Facilitator Superfamily 29 312 6.3E-39 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_16215 3fb7ee79dafc3135a8bbf1a11fd8b95b 449 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_16215 3fb7ee79dafc3135a8bbf1a11fd8b95b 449 SUPERFAMILY SSF103473 10 433 4.19E-86 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_08820 73f7500fd4e9ac51844fee502315ffb8 548 Gene3D G3DSA:3.30.300.30 436 547 2.2E-27 T 23-10-2018 CDG62_08820 73f7500fd4e9ac51844fee502315ffb8 548 Pfam PF00501 AMP-binding enzyme 42 440 2.7E-69 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG62_08820 73f7500fd4e9ac51844fee502315ffb8 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 527 1.4E-21 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG62_08820 73f7500fd4e9ac51844fee502315ffb8 548 SUPERFAMILY SSF56801 33 539 5.76E-124 T 23-10-2018 CDG62_08820 73f7500fd4e9ac51844fee502315ffb8 548 Gene3D G3DSA:3.40.50.12780 2 434 2.4E-88 T 23-10-2018 CDG62_08820 73f7500fd4e9ac51844fee502315ffb8 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 191 202 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG62_06300 42c74ce285762510c10b4cca7db0805b 893 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 180 7.1E-23 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_06300 42c74ce285762510c10b4cca7db0805b 893 SUPERFAMILY SSF56935 55 893 1.28E-101 T 23-10-2018 CDG62_06300 42c74ce285762510c10b4cca7db0805b 893 Gene3D G3DSA:2.40.170.20 400 893 6.3E-64 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_06300 42c74ce285762510c10b4cca7db0805b 893 Pfam PF00593 TonB dependent receptor 380 892 9.2E-52 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_06300 42c74ce285762510c10b4cca7db0805b 893 Gene3D G3DSA:2.170.130.10 49 185 4.6E-36 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_04555 29ac93e405d899826ddf61513d938d8c 633 Pfam PF02779 Transketolase, pyrimidine binding domain 316 476 3.8E-38 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDG62_04555 29ac93e405d899826ddf61513d938d8c 633 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 16 284 3.6E-103 T 23-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG62_04555 29ac93e405d899826ddf61513d938d8c 633 Gene3D G3DSA:3.40.50.970 314 487 5.2E-67 T 23-10-2018 CDG62_04555 29ac93e405d899826ddf61513d938d8c 633 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 15 627 41.591 T 23-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG62_04555 29ac93e405d899826ddf61513d938d8c 633 SUPERFAMILY SSF52518 12 378 9.95E-75 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG62_04555 29ac93e405d899826ddf61513d938d8c 633 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 23-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG62_04555 29ac93e405d899826ddf61513d938d8c 633 SMART SM00861 316 480 2.2E-67 T 23-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CDG62_04555 29ac93e405d899826ddf61513d938d8c 633 SUPERFAMILY SSF52922 489 625 2.22E-29 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDG62_04555 29ac93e405d899826ddf61513d938d8c 633 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 18 624 7.8E-237 T 23-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CDG62_04555 29ac93e405d899826ddf61513d938d8c 633 SUPERFAMILY SSF52518 315 499 7.28E-57 T 23-10-2018 IPR029061 Thiamin diphosphate-binding fold CDG62_04555 29ac93e405d899826ddf61513d938d8c 633 Pfam PF02780 Transketolase, C-terminal domain 505 618 3.2E-27 T 23-10-2018 IPR033248 Transketolase, C-terminal domain CDG62_04555 29ac93e405d899826ddf61513d938d8c 633 Gene3D G3DSA:3.40.50.920 502 630 1.3E-35 T 23-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 CDG62_10950 61e40f20c2b4ad1ba4cfe80df542bfac 336 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 173 266 3.5E-19 T 23-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CDG62_10950 61e40f20c2b4ad1ba4cfe80df542bfac 336 PRINTS PR00682 Isopenicillin N synthase signature 229 255 4.0E-7 T 23-10-2018 CDG62_10950 61e40f20c2b4ad1ba4cfe80df542bfac 336 PRINTS PR00682 Isopenicillin N synthase signature 256 274 4.0E-7 T 23-10-2018 CDG62_10950 61e40f20c2b4ad1ba4cfe80df542bfac 336 PRINTS PR00682 Isopenicillin N synthase signature 30 47 4.0E-7 T 23-10-2018 CDG62_10950 61e40f20c2b4ad1ba4cfe80df542bfac 336 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 7 126 1.7E-22 T 23-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain CDG62_10950 61e40f20c2b4ad1ba4cfe80df542bfac 336 SUPERFAMILY SSF51197 6 304 2.4E-73 T 23-10-2018 CDG62_10950 61e40f20c2b4ad1ba4cfe80df542bfac 336 Gene3D G3DSA:2.60.120.330 1 309 2.8E-85 T 23-10-2018 IPR027443 Isopenicillin N synthase-like CDG62_06690 ddcbffbe40c3b94b9b2a45cc50f85ec2 219 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 80 133 2.0E-22 T 23-10-2018 CDG62_06690 ddcbffbe40c3b94b9b2a45cc50f85ec2 219 PIRSF PIRSF016262 6 218 2.1E-56 T 23-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDG62_06690 ddcbffbe40c3b94b9b2a45cc50f85ec2 219 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 76 91 - T 23-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CDG62_06690 ddcbffbe40c3b94b9b2a45cc50f85ec2 219 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 30 202 2.5E-56 T 23-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDG62_06690 ddcbffbe40c3b94b9b2a45cc50f85ec2 219 Pfam PF03099 Biotin/lipoate A/B protein ligase family 64 164 3.7E-10 T 23-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CDG62_06690 ddcbffbe40c3b94b9b2a45cc50f85ec2 219 SUPERFAMILY SSF55681 17 198 8.04E-58 T 23-10-2018 CDG62_06690 ddcbffbe40c3b94b9b2a45cc50f85ec2 219 Hamap MF_00013 Octanoyltransferase [lipB]. 9 212 32.833 T 23-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CDG62_06690 ddcbffbe40c3b94b9b2a45cc50f85ec2 219 Gene3D G3DSA:3.30.930.10 7 207 2.7E-52 T 23-10-2018 CDG62_10135 d21fb71739f59aa0847a837c2fe2bf62 140 Gene3D G3DSA:3.30.420.270 60 131 2.2E-6 T 23-10-2018 CDG62_10135 d21fb71739f59aa0847a837c2fe2bf62 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 134 2.4E-24 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CDG62_10675 87cf59d5fd85dd8efe30a0275457f8bf 137 SUPERFAMILY SSF54197 1 137 3.56E-37 T 23-10-2018 IPR036265 HIT-like superfamily CDG62_10675 87cf59d5fd85dd8efe30a0275457f8bf 137 Gene3D G3DSA:3.30.428.10 1 137 3.2E-38 T 23-10-2018 IPR036265 HIT-like superfamily CDG62_10675 87cf59d5fd85dd8efe30a0275457f8bf 137 PRINTS PR00332 Histidine triad family signature 29 47 5.7E-18 T 23-10-2018 IPR001310 Histidine triad (HIT) protein CDG62_10675 87cf59d5fd85dd8efe30a0275457f8bf 137 PRINTS PR00332 Histidine triad family signature 96 106 5.7E-18 T 23-10-2018 IPR001310 Histidine triad (HIT) protein CDG62_10675 87cf59d5fd85dd8efe30a0275457f8bf 137 PRINTS PR00332 Histidine triad family signature 8 24 5.7E-18 T 23-10-2018 IPR001310 Histidine triad (HIT) protein CDG62_10675 87cf59d5fd85dd8efe30a0275457f8bf 137 Pfam PF01230 HIT domain 14 109 1.2E-25 T 23-10-2018 IPR001310 Histidine triad (HIT) protein CDG62_12750 c86ddd3d751488e7b3f0eac6bfaa2814 311 TIGRFAM TIGR00688 rarD: protein RarD 3 249 2.9E-47 T 23-10-2018 IPR004626 RarD protein GO:0005887 CDG62_12750 c86ddd3d751488e7b3f0eac6bfaa2814 311 SUPERFAMILY SSF103481 36 140 5.1E-8 T 23-10-2018 CDG62_12750 c86ddd3d751488e7b3f0eac6bfaa2814 311 Pfam PF00892 EamA-like transporter family 3 139 3.3E-9 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_02320 b616bfdd4e0e5ce7cb9da0b762498082 1093 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 75 740 4.7E-143 T 23-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 CDG62_02320 b616bfdd4e0e5ce7cb9da0b762498082 1093 SMART SM00487 311 514 8.1E-9 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG62_02320 b616bfdd4e0e5ce7cb9da0b762498082 1093 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 8 225 1.7E-40 T 23-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CDG62_02320 b616bfdd4e0e5ce7cb9da0b762498082 1093 Gene3D G3DSA:3.40.50.300 314 502 1.8E-48 T 23-10-2018 CDG62_02320 b616bfdd4e0e5ce7cb9da0b762498082 1093 Gene3D G3DSA:3.40.50.300 507 744 7.0E-33 T 23-10-2018 CDG62_02320 b616bfdd4e0e5ce7cb9da0b762498082 1093 Pfam PF04851 Type III restriction enzyme, res subunit 314 484 1.2E-19 T 23-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDG62_02320 b616bfdd4e0e5ce7cb9da0b762498082 1093 Gene3D G3DSA:3.90.1570.50 113 311 1.4E-17 T 23-10-2018 CDG62_02320 b616bfdd4e0e5ce7cb9da0b762498082 1093 SUPERFAMILY SSF52540 279 541 1.44E-23 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_14875 32ac288e053d1ff6730c7fd3200f454d 386 Gene3D G3DSA:2.40.160.60 33 386 8.2E-31 T 23-10-2018 CDG62_14875 32ac288e053d1ff6730c7fd3200f454d 386 SUPERFAMILY SSF56935 22 386 1.37E-50 T 23-10-2018 CDG62_14875 32ac288e053d1ff6730c7fd3200f454d 386 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 41 386 5.3E-16 T 23-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDG62_04215 68676b22d8ba6efa220a14d4bfcee438 1493 Gene3D G3DSA:2.160.20.60 1222 1491 1.5E-97 T 23-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 CDG62_04215 68676b22d8ba6efa220a14d4bfcee438 1493 SUPERFAMILY SSF51395 460 1201 9.62E-245 T 23-10-2018 CDG62_04215 68676b22d8ba6efa220a14d4bfcee438 1493 Pfam PF01493 GXGXG motif 1248 1435 8.9E-76 T 23-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 CDG62_04215 68676b22d8ba6efa220a14d4bfcee438 1493 SUPERFAMILY SSF56235 25 443 1.24E-140 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG62_04215 68676b22d8ba6efa220a14d4bfcee438 1493 Pfam PF01645 Conserved region in glutamate synthase 806 1167 1.2E-147 T 23-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CDG62_04215 68676b22d8ba6efa220a14d4bfcee438 1493 SUPERFAMILY SSF69336 1224 1478 2.75E-87 T 23-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 CDG62_04215 68676b22d8ba6efa220a14d4bfcee438 1493 Gene3D G3DSA:3.60.20.10 25 558 0.0 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG62_04215 68676b22d8ba6efa220a14d4bfcee438 1493 Pfam PF04898 Glutamate synthase central domain 470 749 1.0E-104 T 23-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 CDG62_04215 68676b22d8ba6efa220a14d4bfcee438 1493 Gene3D G3DSA:3.20.20.70 444 804 0.0 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_04215 68676b22d8ba6efa220a14d4bfcee438 1493 Pfam PF00310 Glutamine amidotransferases class-II 25 439 3.8E-162 T 23-10-2018 IPR017932 Glutamine amidotransferase type 2 domain CDG62_04215 68676b22d8ba6efa220a14d4bfcee438 1493 Gene3D G3DSA:3.20.20.70 496 1182 0.0 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_16620 0641cd0f212a51160f1f0f8644440824 597 Gene3D G3DSA:3.40.50.300 1 353 2.1E-22 T 23-10-2018 CDG62_16620 0641cd0f212a51160f1f0f8644440824 597 Pfam PF13175 AAA ATPase domain 158 332 2.9E-19 T 23-10-2018 CDG62_16620 0641cd0f212a51160f1f0f8644440824 597 Pfam PF13175 AAA ATPase domain 1 80 8.7E-11 T 23-10-2018 CDG62_16620 0641cd0f212a51160f1f0f8644440824 597 SUPERFAMILY SSF52540 1 337 1.08E-19 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17580 2c6c88b862665fdc7ce42be9f73442a0 539 Pfam PF03109 ABC1 family 113 231 6.1E-34 T 23-10-2018 IPR004147 UbiB domain CDG62_17580 2c6c88b862665fdc7ce42be9f73442a0 539 SUPERFAMILY SSF56112 95 435 2.14E-22 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_00060 9104179f20e36c03418b242f0d1d1606 287 Pfam PF12571 Phage tail-collar fibre protein 1 144 3.6E-6 T 23-10-2018 IPR022225 Phage tail fibre protein CDG62_15395 95defdbb1035baa0502b7dddd4434799 551 SUPERFAMILY SSF100950 40 277 3.91E-28 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG62_15395 95defdbb1035baa0502b7dddd4434799 551 Gene3D G3DSA:3.40.1080.10 36 236 1.3E-13 T 23-10-2018 CDG62_15395 95defdbb1035baa0502b7dddd4434799 551 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 10 551 3.1E-294 T 23-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 CDG62_15395 95defdbb1035baa0502b7dddd4434799 551 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 10 551 0.0 T 23-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 CDG62_15395 95defdbb1035baa0502b7dddd4434799 551 SUPERFAMILY SSF100950 226 478 2.23E-19 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG62_03165 2dcc3ec543079b7fe04455983b73dd83 340 Gene3D G3DSA:3.90.180.10 19 336 1.6E-112 T 23-10-2018 CDG62_03165 2dcc3ec543079b7fe04455983b73dd83 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 138 4.7E-24 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDG62_03165 2dcc3ec543079b7fe04455983b73dd83 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 23-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CDG62_03165 2dcc3ec543079b7fe04455983b73dd83 340 SUPERFAMILY SSF50129 7 163 1.57E-41 T 23-10-2018 IPR011032 GroES-like superfamily CDG62_03165 2dcc3ec543079b7fe04455983b73dd83 340 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 173 200 - T 23-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDG62_03165 2dcc3ec543079b7fe04455983b73dd83 340 SMART SM00829 15 336 5.7E-8 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDG62_03165 2dcc3ec543079b7fe04455983b73dd83 340 Gene3D G3DSA:3.40.50.720 154 308 1.6E-112 T 23-10-2018 CDG62_03165 2dcc3ec543079b7fe04455983b73dd83 340 Pfam PF00107 Zinc-binding dehydrogenase 180 302 1.6E-21 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDG62_03165 2dcc3ec543079b7fe04455983b73dd83 340 SUPERFAMILY SSF51735 143 306 1.29E-35 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_12345 883acb9733466229427a0823511a1e06 134 Gene3D G3DSA:3.30.420.270 61 129 1.2E-12 T 23-10-2018 CDG62_12345 883acb9733466229427a0823511a1e06 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 133 2.4E-29 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CDG62_17535 18a541baf8d7d121958dda716d073699 432 Pfam PF00144 Beta-lactamase 46 390 7.1E-52 T 23-10-2018 IPR001466 Beta-lactamase-related CDG62_17535 18a541baf8d7d121958dda716d073699 432 SUPERFAMILY SSF56601 36 387 9.98E-66 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG62_17535 18a541baf8d7d121958dda716d073699 432 Gene3D G3DSA:3.40.710.30 36 408 3.4E-74 T 23-10-2018 CDG62_14785 daaeb35958476da16efafb70db0d69bf 466 Gene3D G3DSA:1.20.1740.10 8 463 5.5E-65 T 23-10-2018 CDG62_14785 daaeb35958476da16efafb70db0d69bf 466 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG62_14785 daaeb35958476da16efafb70db0d69bf 466 PIRSF PIRSF006060 1 465 6.8E-81 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_14785 daaeb35958476da16efafb70db0d69bf 466 Pfam PF00324 Amino acid permease 17 448 2.6E-111 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 SMART SM00838 407 492 0.0019 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like CDG62_12860 4e72ef812d19f458c857becf39650aed 605 Pfam PF00679 Elongation factor G C-terminus 408 493 2.5E-20 T 23-10-2018 IPR000640 Elongation factor EFG, domain V-like CDG62_12860 4e72ef812d19f458c857becf39650aed 605 TIGRFAM TIGR01393 lepA: elongation factor 4 11 604 4.3E-289 T 23-10-2018 IPR006297 Elongation factor 4 GO:0005525 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 Gene3D G3DSA:3.30.70.870 295 376 1.1E-33 T 23-10-2018 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 SUPERFAMILY SSF54980 408 502 5.76E-25 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG62_12860 4e72ef812d19f458c857becf39650aed 605 PRINTS PR00315 GTP-binding elongation factor signature 15 28 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.5E-14 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 SUPERFAMILY SSF50447 191 297 1.13E-21 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG62_12860 4e72ef812d19f458c857becf39650aed 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 183 1.2E-18 T 23-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 SUPERFAMILY SSF52540 6 220 6.73E-55 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12860 4e72ef812d19f458c857becf39650aed 605 Hamap MF_00071 Elongation factor 4 [lepA]. 1 605 292.096 T 23-10-2018 IPR006297 Elongation factor 4 GO:0005525 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 Pfam PF00009 Elongation factor Tu GTP binding domain 11 190 1.5E-52 T 23-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 SUPERFAMILY SSF54980 301 379 2.41E-17 T 23-10-2018 IPR035647 EF-G domain III/V-like CDG62_12860 4e72ef812d19f458c857becf39650aed 605 Gene3D G3DSA:3.40.50.300 8 194 6.0E-70 T 23-10-2018 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 Gene3D G3DSA:3.30.70.3380 377 487 3.0E-39 T 23-10-2018 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-10-2018 IPR031157 Tr-type G domain, conserved site CDG62_12860 4e72ef812d19f458c857becf39650aed 605 Gene3D G3DSA:2.40.30.10 195 294 9.4E-32 T 23-10-2018 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 Gene3D G3DSA:3.30.70.2570 488 562 3.0E-32 T 23-10-2018 IPR038363 LepA, C-terminal domain superfamily CDG62_12860 4e72ef812d19f458c857becf39650aed 605 Pfam PF03144 Elongation factor Tu domain 2 214 284 4.1E-11 T 23-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CDG62_12860 4e72ef812d19f458c857becf39650aed 605 Pfam PF06421 GTP-binding protein LepA C-terminus 496 602 1.2E-49 T 23-10-2018 IPR013842 GTP-binding protein LepA, C-terminal CDG62_03035 8e57d6b53a1a136bd7b1eb1eff7d3521 885 Pfam PF01345 Domain of unknown function DUF11 196 303 8.6E-7 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_18990 ee878cb4df488c68307c06ea788ddbaa 238 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 10 229 2.6E-87 T 23-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CDG62_18990 ee878cb4df488c68307c06ea788ddbaa 238 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 10 235 37.33 T 23-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CDG62_18990 ee878cb4df488c68307c06ea788ddbaa 238 Gene3D G3DSA:3.40.50.150 10 234 1.1E-76 T 23-10-2018 CDG62_18990 ee878cb4df488c68307c06ea788ddbaa 238 SUPERFAMILY SSF53335 14 230 3.93E-51 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_18990 ee878cb4df488c68307c06ea788ddbaa 238 Pfam PF13489 Methyltransferase domain 50 202 1.4E-25 T 23-10-2018 CDG62_18890 1ef5731602088c8a7f94811614d99e1c 414 Pfam PF13692 Glycosyl transferases group 1 231 373 2.0E-10 T 23-10-2018 CDG62_18890 1ef5731602088c8a7f94811614d99e1c 414 Pfam PF13439 Glycosyltransferase Family 4 27 209 1.1E-13 T 23-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CDG62_18890 1ef5731602088c8a7f94811614d99e1c 414 SUPERFAMILY SSF53756 27 407 2.26E-37 T 23-10-2018 CDG62_18890 1ef5731602088c8a7f94811614d99e1c 414 Gene3D G3DSA:3.40.50.2000 224 394 3.9E-20 T 23-10-2018 CDG62_18890 1ef5731602088c8a7f94811614d99e1c 414 Gene3D G3DSA:3.40.50.2000 22 222 5.0E-16 T 23-10-2018 CDG62_09690 d5a137f354a43089d8f7b6ac1e029598 1036 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 282 354 3.1E-18 T 23-10-2018 IPR013491 Caudovirus, tape measure, N-terminal CDG62_09780 804fe2dea4848f0b6be571a7279891fe 211 Gene3D G3DSA:2.10.109.10 72 204 2.4E-23 T 23-10-2018 CDG62_09780 804fe2dea4848f0b6be571a7279891fe 211 Pfam PF00717 Peptidase S24-like 101 149 3.3E-7 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDG62_09780 804fe2dea4848f0b6be571a7279891fe 211 SUPERFAMILY SSF51306 78 200 1.69E-15 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CDG62_12165 e7b572ccf52f59c5cd46418a8a72313e 583 Gene3D G3DSA:3.20.20.140 99 540 1.1E-121 T 23-10-2018 CDG62_12165 e7b572ccf52f59c5cd46418a8a72313e 583 SUPERFAMILY SSF51338 38 581 3.46E-14 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG62_12165 e7b572ccf52f59c5cd46418a8a72313e 583 Gene3D G3DSA:3.10.310.70 117 237 1.1E-121 T 23-10-2018 CDG62_12165 e7b572ccf52f59c5cd46418a8a72313e 583 SUPERFAMILY SSF51556 98 541 6.81E-17 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG62_12165 e7b572ccf52f59c5cd46418a8a72313e 583 Gene3D G3DSA:2.30.40.10 46 557 1.1E-121 T 23-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 CDG62_12165 e7b572ccf52f59c5cd46418a8a72313e 583 Pfam PF07969 Amidohydrolase family 90 581 2.4E-100 T 23-10-2018 IPR013108 Amidohydrolase 3 CDG62_11885 f6ebf952c015b74a227ef4023a0a4fca 278 SUPERFAMILY SSF53850 40 273 4.71E-60 T 23-10-2018 CDG62_11885 f6ebf952c015b74a227ef4023a0a4fca 278 Gene3D G3DSA:3.40.190.10 120 225 1.2E-64 T 23-10-2018 CDG62_11885 f6ebf952c015b74a227ef4023a0a4fca 278 Gene3D G3DSA:3.40.190.10 43 268 1.2E-64 T 23-10-2018 CDG62_11885 f6ebf952c015b74a227ef4023a0a4fca 278 Pfam PF03180 NLPA lipoprotein 40 271 1.1E-64 T 23-10-2018 IPR004872 Lipoprotein NlpA family CDG62_10715 1273f81ef650cc64404a2851634ae46a 109 Gene3D G3DSA:3.30.1310.10 1 109 3.7E-33 T 23-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CDG62_10715 1273f81ef650cc64404a2851634ae46a 109 PIRSF PIRSF004555 1 109 6.9E-31 T 23-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CDG62_10715 1273f81ef650cc64404a2851634ae46a 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 1 98 20.71 T 23-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CDG62_10715 1273f81ef650cc64404a2851634ae46a 109 Pfam PF02575 YbaB/EbfC DNA-binding family 7 98 1.3E-28 T 23-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CDG62_10715 1273f81ef650cc64404a2851634ae46a 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 104 1.4E-23 T 23-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CDG62_10715 1273f81ef650cc64404a2851634ae46a 109 SUPERFAMILY SSF82607 7 103 1.57E-27 T 23-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CDG62_02275 6c7114c0d4b2d1ab91694796ad0c34df 171 Pfam PF04224 Protein of unknown function, DUF417 22 162 1.1E-31 T 23-10-2018 IPR007339 Inner membrane protein RclC-like CDG62_02275 6c7114c0d4b2d1ab91694796ad0c34df 171 PIRSF PIRSF028065 8 167 1.6E-36 T 23-10-2018 IPR016865 Inner membrane protein RclC CDG62_08560 8f8eb7236b61d330a9fd2821aac60d4c 1189 SMART SM00481 4 71 3.6E-18 T 23-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDG62_08560 8f8eb7236b61d330a9fd2821aac60d4c 1189 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 990 0.0 T 23-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_08560 8f8eb7236b61d330a9fd2821aac60d4c 1189 Pfam PF02811 PHP domain 5 161 9.8E-29 T 23-10-2018 IPR004013 PHP domain GO:0003824 CDG62_08560 8f8eb7236b61d330a9fd2821aac60d4c 1189 Pfam PF14579 Helix-hairpin-helix motif 800 888 2.4E-26 T 23-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_08560 8f8eb7236b61d330a9fd2821aac60d4c 1189 Gene3D G3DSA:1.10.10.1600 428 511 1.6E-25 T 23-10-2018 CDG62_08560 8f8eb7236b61d330a9fd2821aac60d4c 1189 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 283 725 2.7E-162 T 23-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CDG62_08560 8f8eb7236b61d330a9fd2821aac60d4c 1189 Gene3D G3DSA:3.20.20.140 1 261 3.2E-79 T 23-10-2018 CDG62_08560 8f8eb7236b61d330a9fd2821aac60d4c 1189 SUPERFAMILY SSF89550 3 254 2.16E-17 T 23-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CDG62_05290 49c4be7db96aec20561347b50059ccbf 426 Gene3D G3DSA:3.40.50.2000 50 223 1.0E-64 T 23-10-2018 CDG62_05290 49c4be7db96aec20561347b50059ccbf 426 Pfam PF00534 Glycosyl transferases group 1 235 386 3.8E-34 T 23-10-2018 IPR001296 Glycosyl transferase, family 1 CDG62_05290 49c4be7db96aec20561347b50059ccbf 426 Gene3D G3DSA:3.40.50.2000 224 402 1.0E-64 T 23-10-2018 CDG62_05290 49c4be7db96aec20561347b50059ccbf 426 Pfam PF13439 Glycosyltransferase Family 4 59 227 9.5E-22 T 23-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 CDG62_05290 49c4be7db96aec20561347b50059ccbf 426 SUPERFAMILY SSF53756 47 417 3.45E-72 T 23-10-2018 CDG62_15555 d83cc3e1d04456d5e8f236414e3c99f4 403 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 23-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_15555 d83cc3e1d04456d5e8f236414e3c99f4 403 Gene3D G3DSA:3.40.50.1100 17 213 1.7E-184 T 23-10-2018 CDG62_15555 d83cc3e1d04456d5e8f236414e3c99f4 403 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 397 7.3E-187 T 23-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_15555 d83cc3e1d04456d5e8f236414e3c99f4 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 385 1.2E-47 T 23-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme CDG62_15555 d83cc3e1d04456d5e8f236414e3c99f4 403 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 398 51.598 T 23-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_15555 d83cc3e1d04456d5e8f236414e3c99f4 403 PIRSF PIRSF001413 3 403 8.4E-166 T 23-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CDG62_15555 d83cc3e1d04456d5e8f236414e3c99f4 403 SUPERFAMILY SSF53686 10 397 6.94E-145 T 23-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDG62_15555 d83cc3e1d04456d5e8f236414e3c99f4 403 Gene3D G3DSA:3.40.50.1100 61 391 1.7E-184 T 23-10-2018 CDG62_07810 38cf65037dc6c722b02e03a1ff87b0b1 445 SUPERFAMILY SSF55874 278 440 1.83E-32 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_07810 38cf65037dc6c722b02e03a1ff87b0b1 445 Gene3D G3DSA:3.30.565.10 292 443 2.3E-31 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_07810 38cf65037dc6c722b02e03a1ff87b0b1 445 Gene3D G3DSA:1.10.287.130 174 290 1.0E-18 T 23-10-2018 CDG62_07810 38cf65037dc6c722b02e03a1ff87b0b1 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 288 8.2E-13 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_07810 38cf65037dc6c722b02e03a1ff87b0b1 445 SUPERFAMILY SSF47384 210 289 1.04E-13 T 23-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 CDG62_07810 38cf65037dc6c722b02e03a1ff87b0b1 445 SMART SM00388 226 289 3.3E-13 T 23-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CDG62_07810 38cf65037dc6c722b02e03a1ff87b0b1 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 422 1.5E-6 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_07810 38cf65037dc6c722b02e03a1ff87b0b1 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 1.5E-6 T 23-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CDG62_07810 38cf65037dc6c722b02e03a1ff87b0b1 445 SMART SM00387 335 444 6.9E-24 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_07810 38cf65037dc6c722b02e03a1ff87b0b1 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 1.5E-17 T 23-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase CDG62_06975 78554df1e272a6eb5e569c4875c24bd0 337 SUPERFAMILY SSF52374 9 333 6.39E-79 T 23-10-2018 CDG62_06975 78554df1e272a6eb5e569c4875c24bd0 337 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 25 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_06975 78554df1e272a6eb5e569c4875c24bd0 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 71 90 2.9E-22 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CDG62_06975 78554df1e272a6eb5e569c4875c24bd0 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 20 36 2.9E-22 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CDG62_06975 78554df1e272a6eb5e569c4875c24bd0 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 201 211 2.9E-22 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CDG62_06975 78554df1e272a6eb5e569c4875c24bd0 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 149 170 2.9E-22 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CDG62_06975 78554df1e272a6eb5e569c4875c24bd0 337 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 7 333 4.5E-71 T 23-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CDG62_06975 78554df1e272a6eb5e569c4875c24bd0 337 Gene3D G3DSA:3.40.50.620 10 329 6.9E-103 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_06975 78554df1e272a6eb5e569c4875c24bd0 337 Gene3D G3DSA:1.10.240.10 188 302 6.9E-103 T 23-10-2018 CDG62_06975 78554df1e272a6eb5e569c4875c24bd0 337 Pfam PF00579 tRNA synthetases class I (W and Y) 6 288 2.6E-56 T 23-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_10330 31d7190c546ab1a0321e5ec99aa786da 147 SUPERFAMILY SSF52402 1 146 3.35E-34 T 23-10-2018 CDG62_10330 31d7190c546ab1a0321e5ec99aa786da 147 PIRSF PIRSF006276 1 147 3.1E-22 T 23-10-2018 IPR006015 Universal stress protein A CDG62_10330 31d7190c546ab1a0321e5ec99aa786da 147 Pfam PF00582 Universal stress protein family 3 146 4.2E-27 T 23-10-2018 IPR006016 UspA CDG62_10330 31d7190c546ab1a0321e5ec99aa786da 147 Gene3D G3DSA:3.40.50.620 1 147 7.1E-35 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_10330 31d7190c546ab1a0321e5ec99aa786da 147 PRINTS PR01438 Universal stress protein signature 124 146 9.9E-19 T 23-10-2018 IPR006015 Universal stress protein A CDG62_10330 31d7190c546ab1a0321e5ec99aa786da 147 PRINTS PR01438 Universal stress protein signature 3 21 9.9E-19 T 23-10-2018 IPR006015 Universal stress protein A CDG62_10330 31d7190c546ab1a0321e5ec99aa786da 147 PRINTS PR01438 Universal stress protein signature 106 118 9.9E-19 T 23-10-2018 IPR006015 Universal stress protein A CDG62_17290 275e637593ef3bd51c8be699d38e5c24 613 Pfam PF13193 AMP-binding enzyme C-terminal domain 486 565 2.1E-7 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG62_17290 275e637593ef3bd51c8be699d38e5c24 613 Gene3D G3DSA:3.30.300.30 474 582 4.1E-13 T 23-10-2018 CDG62_17290 275e637593ef3bd51c8be699d38e5c24 613 Pfam PF00501 AMP-binding enzyme 51 477 3.1E-60 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG62_17290 275e637593ef3bd51c8be699d38e5c24 613 SUPERFAMILY SSF56801 50 577 3.92E-95 T 23-10-2018 CDG62_17290 275e637593ef3bd51c8be699d38e5c24 613 ProSitePatterns PS00455 Putative AMP-binding domain signature. 218 229 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG62_17290 275e637593ef3bd51c8be699d38e5c24 613 Gene3D G3DSA:3.40.50.12780 47 473 1.2E-58 T 23-10-2018 CDG62_08850 a1ca1012d2ba6d46f8b50af3f03688f8 211 SUPERFAMILY SSF47240 44 126 6.56E-16 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG62_08850 a1ca1012d2ba6d46f8b50af3f03688f8 211 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 11 211 28.99 T 23-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 CDG62_08850 a1ca1012d2ba6d46f8b50af3f03688f8 211 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 50 209 3.1E-41 T 23-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 CDG62_12160 9d6093cf8bd24e565eab940b1bc13d9d 211 Gene3D G3DSA:1.10.357.10 6 209 5.7E-29 T 23-10-2018 CDG62_12160 9d6093cf8bd24e565eab940b1bc13d9d 211 SUPERFAMILY SSF48498 82 206 8.0E-16 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG62_12160 9d6093cf8bd24e565eab940b1bc13d9d 211 SUPERFAMILY SSF46689 5 73 3.54E-15 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_12160 9d6093cf8bd24e565eab940b1bc13d9d 211 Pfam PF09209 Domain of unknown function (DUF1956) 86 203 4.4E-16 T 23-10-2018 IPR015292 Transcription regulator YbiH, C-terminal CDG62_12160 9d6093cf8bd24e565eab940b1bc13d9d 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.1E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_12160 9d6093cf8bd24e565eab940b1bc13d9d 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.1E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_12160 9d6093cf8bd24e565eab940b1bc13d9d 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 2.1E-11 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_02655 331ba2ca6d9ba40e38b46d7dd2fd5afe 478 Gene3D G3DSA:3.40.605.10 29 470 2.2E-130 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG62_02655 331ba2ca6d9ba40e38b46d7dd2fd5afe 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDG62_02655 331ba2ca6d9ba40e38b46d7dd2fd5afe 478 Pfam PF00171 Aldehyde dehydrogenase family 28 473 2.3E-124 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG62_02655 331ba2ca6d9ba40e38b46d7dd2fd5afe 478 SUPERFAMILY SSF53720 29 474 1.57E-121 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG62_02655 331ba2ca6d9ba40e38b46d7dd2fd5afe 478 Gene3D G3DSA:3.40.309.10 246 440 2.2E-130 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG62_17530 d4ae388d3f4894551de97eb4d4d2aaf6 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.442 T 23-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_17530 d4ae388d3f4894551de97eb4d4d2aaf6 89 SMART SM01387 8 88 2.2E-52 T 23-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_17530 d4ae388d3f4894551de97eb4d4d2aaf6 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 3.7E-38 T 23-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_17530 d4ae388d3f4894551de97eb4d4d2aaf6 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 3.0E-35 T 23-10-2018 CDG62_17530 d4ae388d3f4894551de97eb4d4d2aaf6 89 Pfam PF00312 Ribosomal protein S15 9 88 4.0E-37 T 23-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_17530 d4ae388d3f4894551de97eb4d4d2aaf6 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 23-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_17530 d4ae388d3f4894551de97eb4d4d2aaf6 89 SUPERFAMILY SSF47060 3 89 4.71E-35 T 23-10-2018 IPR009068 S15/NS1, RNA-binding CDG62_17530 d4ae388d3f4894551de97eb4d4d2aaf6 89 Gene3D G3DSA:1.10.287.10 2 89 9.8E-36 T 23-10-2018 CDG62_07970 00891c0b6c667c4113353bd749105a9b 344 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 112 1.2E-32 T 23-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_07970 00891c0b6c667c4113353bd749105a9b 344 SMART SM00846 2 162 1.2E-68 T 23-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_07970 00891c0b6c667c4113353bd749105a9b 344 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 160 167 - T 23-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_07970 00891c0b6c667c4113353bd749105a9b 344 Gene3D G3DSA:3.30.360.10 161 324 1.2E-126 T 23-10-2018 CDG62_07970 00891c0b6c667c4113353bd749105a9b 344 PIRSF PIRSF000149 1 343 1.8E-115 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_07970 00891c0b6c667c4113353bd749105a9b 344 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 167 322 5.3E-50 T 23-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_07970 00891c0b6c667c4113353bd749105a9b 344 SUPERFAMILY SSF51735 2 190 2.79E-49 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_07970 00891c0b6c667c4113353bd749105a9b 344 Gene3D G3DSA:3.40.50.720 3 336 1.2E-126 T 23-10-2018 CDG62_07970 00891c0b6c667c4113353bd749105a9b 344 SUPERFAMILY SSF55347 162 323 4.05E-56 T 23-10-2018 CDG62_07970 00891c0b6c667c4113353bd749105a9b 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 279 294 7.3E-28 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_07970 00891c0b6c667c4113353bd749105a9b 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 239 256 7.3E-28 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_07970 00891c0b6c667c4113353bd749105a9b 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 119 132 7.3E-28 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_07970 00891c0b6c667c4113353bd749105a9b 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 156 174 7.3E-28 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_07970 00891c0b6c667c4113353bd749105a9b 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 183 199 7.3E-28 T 23-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_04805 11ecaf9e487f9e5ce1784c2b4526231a 118 Pfam PF00416 Ribosomal protein S13/S18 3 62 2.4E-13 T 23-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04805 11ecaf9e487f9e5ce1784c2b4526231a 118 Pfam PF00416 Ribosomal protein S13/S18 65 108 9.7E-17 T 23-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04805 11ecaf9e487f9e5ce1784c2b4526231a 118 Gene3D G3DSA:1.10.8.50 1 71 8.0E-26 T 23-10-2018 CDG62_04805 11ecaf9e487f9e5ce1784c2b4526231a 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 23-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04805 11ecaf9e487f9e5ce1784c2b4526231a 118 Gene3D G3DSA:4.10.910.10 72 118 3.8E-27 T 23-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04805 11ecaf9e487f9e5ce1784c2b4526231a 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 8.0E-53 T 23-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04805 11ecaf9e487f9e5ce1784c2b4526231a 118 SUPERFAMILY SSF46946 2 114 5.89E-45 T 23-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CDG62_04805 11ecaf9e487f9e5ce1784c2b4526231a 118 PIRSF PIRSF002134 1 118 2.0E-40 T 23-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04805 11ecaf9e487f9e5ce1784c2b4526231a 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.931 T 23-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_17615 dd7a7274bf86a13e54f3f5261c0ffd00 946 Pfam PF13244 Domain of unknown function (DUF4040) 624 685 1.0E-17 T 23-10-2018 IPR025383 Domain of unknown function DUF4040 CDG62_17615 dd7a7274bf86a13e54f3f5261c0ffd00 946 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 105 4.5E-7 T 23-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_17615 dd7a7274bf86a13e54f3f5261c0ffd00 946 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 310 322 9.8E-36 T 23-10-2018 CDG62_17615 dd7a7274bf86a13e54f3f5261c0ffd00 946 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 268 9.8E-36 T 23-10-2018 CDG62_17615 dd7a7274bf86a13e54f3f5261c0ffd00 946 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 9.8E-36 T 23-10-2018 CDG62_17615 dd7a7274bf86a13e54f3f5261c0ffd00 946 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 9.8E-36 T 23-10-2018 CDG62_17615 dd7a7274bf86a13e54f3f5261c0ffd00 946 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 9.8E-36 T 23-10-2018 CDG62_17615 dd7a7274bf86a13e54f3f5261c0ffd00 946 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 9.8E-36 T 23-10-2018 CDG62_17615 dd7a7274bf86a13e54f3f5261c0ffd00 946 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 798 924 3.8E-35 T 23-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CDG62_17615 dd7a7274bf86a13e54f3f5261c0ffd00 946 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 260 282 7.7E-5 T 23-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDG62_17615 dd7a7274bf86a13e54f3f5261c0ffd00 946 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 81 101 7.7E-5 T 23-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CDG62_17615 dd7a7274bf86a13e54f3f5261c0ffd00 946 Pfam PF00361 Proton-conducting membrane transporter 130 405 1.6E-64 T 23-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_04570 953b1079fb6e5bc8e4aead4647671f38 272 SMART SM00382 37 225 3.5E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_04570 953b1079fb6e5bc8e4aead4647671f38 272 SUPERFAMILY SSF52540 12 242 2.73E-64 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_04570 953b1079fb6e5bc8e4aead4647671f38 272 Gene3D G3DSA:3.40.50.300 10 268 1.1E-67 T 23-10-2018 CDG62_04570 953b1079fb6e5bc8e4aead4647671f38 272 Pfam PF00005 ABC transporter 29 177 5.9E-31 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_03820 441d77e49dcf4d4c4efece40aa1fa696 187 Gene3D G3DSA:3.40.30.10 1 186 5.9E-65 T 23-10-2018 CDG62_03820 441d77e49dcf4d4c4efece40aa1fa696 187 Pfam PF00578 AhpC/TSA family 5 132 1.3E-35 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG62_03820 441d77e49dcf4d4c4efece40aa1fa696 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 9.3E-104 T 23-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDG62_03820 441d77e49dcf4d4c4efece40aa1fa696 187 SUPERFAMILY SSF52833 1 186 4.02E-59 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_03820 441d77e49dcf4d4c4efece40aa1fa696 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 4.8E-5 T 23-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG62_03820 441d77e49dcf4d4c4efece40aa1fa696 187 PIRSF PIRSF000239 1 187 4.1E-55 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG62_11125 3fc9d0f1dc9ba75bd2c754684422347c 420 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 12 143 9.6E-15 T 23-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 CDG62_11125 3fc9d0f1dc9ba75bd2c754684422347c 420 Gene3D G3DSA:3.40.50.720 10 179 3.5E-37 T 23-10-2018 CDG62_11125 3fc9d0f1dc9ba75bd2c754684422347c 420 SUPERFAMILY SSF51735 10 172 1.14E-11 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_16840 e7f62dc7d37729324714785a0c6b3037 436 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 1.0E-50 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG62_16840 e7f62dc7d37729324714785a0c6b3037 436 SUPERFAMILY SSF57716 9 44 1.71E-10 T 23-10-2018 CDG62_16840 e7f62dc7d37729324714785a0c6b3037 436 SMART SM00382 111 332 1.3E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_16840 e7f62dc7d37729324714785a0c6b3037 436 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 414 52.163 T 23-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CDG62_16840 e7f62dc7d37729324714785a0c6b3037 436 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 408 2.8E-204 T 23-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CDG62_16840 e7f62dc7d37729324714785a0c6b3037 436 Gene3D G3DSA:3.40.50.300 54 314 4.2E-111 T 23-10-2018 CDG62_16840 e7f62dc7d37729324714785a0c6b3037 436 SMART SM00994 8 47 1.4E-19 T 23-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CDG62_16840 e7f62dc7d37729324714785a0c6b3037 436 SUPERFAMILY SSF52540 59 402 4.24E-75 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_16840 e7f62dc7d37729324714785a0c6b3037 436 Gene3D G3DSA:1.10.8.60 315 423 1.2E-37 T 23-10-2018 CDG62_16840 e7f62dc7d37729324714785a0c6b3037 436 SMART SM01086 316 410 8.3E-34 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG62_16840 e7f62dc7d37729324714785a0c6b3037 436 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 316 391 2.1E-16 T 23-10-2018 IPR019489 Clp ATPase, C-terminal CDG62_16840 e7f62dc7d37729324714785a0c6b3037 436 Gene3D G3DSA:3.30.50.30 2 47 9.4E-17 T 23-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily CDG62_16840 e7f62dc7d37729324714785a0c6b3037 436 Pfam PF06689 ClpX C4-type zinc finger 9 45 1.8E-17 T 23-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CDG62_13230 7166caec76b7a51432bdb9835eaa6585 187 Gene3D G3DSA:1.25.40.10 3 187 1.2E-36 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_13230 7166caec76b7a51432bdb9835eaa6585 187 Pfam PF08238 Sel1 repeat 117 149 0.0013 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_13230 7166caec76b7a51432bdb9835eaa6585 187 Pfam PF08238 Sel1 repeat 151 181 2.5E-4 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_13230 7166caec76b7a51432bdb9835eaa6585 187 Pfam PF08238 Sel1 repeat 35 69 7.7E-4 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_13230 7166caec76b7a51432bdb9835eaa6585 187 Pfam PF08238 Sel1 repeat 71 114 7.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_13230 7166caec76b7a51432bdb9835eaa6585 187 SUPERFAMILY SSF81901 29 181 5.84E-25 T 23-10-2018 CDG62_13230 7166caec76b7a51432bdb9835eaa6585 187 SMART SM00671 35 69 0.081 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_13230 7166caec76b7a51432bdb9835eaa6585 187 SMART SM00671 70 114 300.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_13230 7166caec76b7a51432bdb9835eaa6585 187 SMART SM00671 151 186 0.12 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_13230 7166caec76b7a51432bdb9835eaa6585 187 SMART SM00671 115 150 0.003 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_07610 ace0453bb1404d0e1a9f2057bf7e0679 116 Gene3D G3DSA:1.10.10.10 1 116 5.4E-37 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_07610 ace0453bb1404d0e1a9f2057bf7e0679 116 SUPERFAMILY SSF46785 5 104 1.97E-24 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_07610 ace0453bb1404d0e1a9f2057bf7e0679 116 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 86 3.6E-12 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_06175 a566d2706a3129555144d3646403082d 269 Pfam PF01578 Cytochrome C assembly protein 7 266 9.2E-24 T 23-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CDG62_09275 e555ec9417a2b9a1c86f70ce66caf4a4 334 Pfam PF00294 pfkB family carbohydrate kinase 47 317 1.3E-53 T 23-10-2018 IPR011611 Carbohydrate kinase PfkB CDG62_09275 e555ec9417a2b9a1c86f70ce66caf4a4 334 PRINTS PR00990 Ribokinase signature 206 221 5.8E-5 T 23-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CDG62_09275 e555ec9417a2b9a1c86f70ce66caf4a4 334 PRINTS PR00990 Ribokinase signature 244 255 5.8E-5 T 23-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CDG62_09275 e555ec9417a2b9a1c86f70ce66caf4a4 334 PRINTS PR00990 Ribokinase signature 57 76 5.8E-5 T 23-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CDG62_09275 e555ec9417a2b9a1c86f70ce66caf4a4 334 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 62 86 - T 23-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CDG62_09275 e555ec9417a2b9a1c86f70ce66caf4a4 334 SUPERFAMILY SSF53613 1 319 8.26E-73 T 23-10-2018 IPR029056 Ribokinase-like CDG62_09275 e555ec9417a2b9a1c86f70ce66caf4a4 334 Gene3D G3DSA:3.40.1190.20 11 314 1.9E-76 T 23-10-2018 IPR029056 Ribokinase-like CDG62_09275 e555ec9417a2b9a1c86f70ce66caf4a4 334 Gene3D G3DSA:3.30.1110.10 14 133 1.9E-76 T 23-10-2018 CDG62_14975 fcdd9c3b37a797c3bed64f9cc9b58fd7 397 SUPERFAMILY SSF90123 96 390 1.31E-8 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG62_14975 fcdd9c3b37a797c3bed64f9cc9b58fd7 397 Pfam PF05992 SbmA/BacA-like family 84 395 1.5E-157 T 23-10-2018 IPR009248 SbmA/BacA-like GO:0015833|GO:0016021|GO:1904680 CDG62_11175 279476ed3ce4d13458466056bf24027b 455 Pfam PF07690 Major Facilitator Superfamily 29 337 4.3E-39 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_11175 279476ed3ce4d13458466056bf24027b 455 SUPERFAMILY SSF103473 11 430 1.44E-87 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_11175 279476ed3ce4d13458466056bf24027b 455 Gene3D G3DSA:1.20.1250.20 20 431 8.8E-78 T 23-10-2018 CDG62_11175 279476ed3ce4d13458466056bf24027b 455 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 8 403 1.8E-130 T 23-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 CDG62_11175 279476ed3ce4d13458466056bf24027b 455 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_09290 c8cd209d822d00550ff4ee55cc364fc9 379 Gene3D G3DSA:2.40.230.10 118 379 1.0E-89 T 23-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG62_09290 c8cd209d822d00550ff4ee55cc364fc9 379 Pfam PF02253 Phospholipase A1 114 375 4.2E-106 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG62_09290 c8cd209d822d00550ff4ee55cc364fc9 379 PRINTS PR01486 Bacterial phospholipase A1 protein signature 165 182 1.3E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG62_09290 c8cd209d822d00550ff4ee55cc364fc9 379 PRINTS PR01486 Bacterial phospholipase A1 protein signature 255 273 1.3E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG62_09290 c8cd209d822d00550ff4ee55cc364fc9 379 PRINTS PR01486 Bacterial phospholipase A1 protein signature 290 308 1.3E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG62_09290 c8cd209d822d00550ff4ee55cc364fc9 379 PRINTS PR01486 Bacterial phospholipase A1 protein signature 240 254 1.3E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG62_09290 c8cd209d822d00550ff4ee55cc364fc9 379 PRINTS PR01486 Bacterial phospholipase A1 protein signature 326 343 1.3E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG62_09290 c8cd209d822d00550ff4ee55cc364fc9 379 PRINTS PR01486 Bacterial phospholipase A1 protein signature 187 203 1.3E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG62_09290 c8cd209d822d00550ff4ee55cc364fc9 379 PRINTS PR01486 Bacterial phospholipase A1 protein signature 348 368 1.3E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG62_09290 c8cd209d822d00550ff4ee55cc364fc9 379 PRINTS PR01486 Bacterial phospholipase A1 protein signature 210 229 1.3E-36 T 23-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG62_09290 c8cd209d822d00550ff4ee55cc364fc9 379 SUPERFAMILY SSF56931 115 378 2.88E-92 T 23-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CDG62_12020 5e3a66c15667e8159123fb413ea6c6b9 350 Pfam PF03060 Nitronate monooxygenase 3 342 3.0E-72 T 23-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CDG62_12020 5e3a66c15667e8159123fb413ea6c6b9 350 Gene3D G3DSA:3.20.20.70 2 346 8.5E-101 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_12020 5e3a66c15667e8159123fb413ea6c6b9 350 SUPERFAMILY SSF51412 4 337 5.04E-57 T 23-10-2018 CDG62_13240 34db23fb2276645a49741a5edd8dac99 177 Gene3D G3DSA:3.90.70.10 13 177 3.3E-7 T 23-10-2018 CDG62_13240 34db23fb2276645a49741a5edd8dac99 177 Pfam PF03412 Peptidase C39 family 15 77 2.4E-5 T 23-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CDG62_02625 4b0243fe911f61a88421914353855e9a 450 Gene3D G3DSA:1.20.1250.20 14 228 1.1E-45 T 23-10-2018 CDG62_02625 4b0243fe911f61a88421914353855e9a 450 SUPERFAMILY SSF103473 8 443 2.75E-82 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_02625 4b0243fe911f61a88421914353855e9a 450 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_02625 4b0243fe911f61a88421914353855e9a 450 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 6 407 3.2E-133 T 23-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 CDG62_02625 4b0243fe911f61a88421914353855e9a 450 Pfam PF07690 Major Facilitator Superfamily 28 341 5.7E-35 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_02625 4b0243fe911f61a88421914353855e9a 450 Gene3D G3DSA:1.20.1250.20 245 445 4.2E-25 T 23-10-2018 CDG62_03275 ca5760dfc63c5fc33d0039d80d59bfb1 687 PIRSF PIRSF015589 1 686 6.0E-261 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDG62_03275 ca5760dfc63c5fc33d0039d80d59bfb1 687 Pfam PF13089 Polyphosphate kinase N-terminal domain 11 116 5.3E-29 T 23-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CDG62_03275 ca5760dfc63c5fc33d0039d80d59bfb1 687 Hamap MF_00347 Polyphosphate kinase [ppk]. 8 685 27.017 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDG62_03275 ca5760dfc63c5fc33d0039d80d59bfb1 687 SUPERFAMILY SSF143724 114 313 7.06E-60 T 23-10-2018 CDG62_03275 ca5760dfc63c5fc33d0039d80d59bfb1 687 Pfam PF13090 Polyphosphate kinase C-terminal domain 333 680 2.8E-148 T 23-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CDG62_03275 ca5760dfc63c5fc33d0039d80d59bfb1 687 Gene3D G3DSA:3.30.870.10 502 686 4.2E-64 T 23-10-2018 CDG62_03275 ca5760dfc63c5fc33d0039d80d59bfb1 687 SUPERFAMILY SSF56024 503 680 4.71E-67 T 23-10-2018 CDG62_03275 ca5760dfc63c5fc33d0039d80d59bfb1 687 Gene3D G3DSA:3.30.1840.10 3 314 4.1E-95 T 23-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 CDG62_03275 ca5760dfc63c5fc33d0039d80d59bfb1 687 SUPERFAMILY SSF56024 317 494 2.95E-54 T 23-10-2018 CDG62_03275 ca5760dfc63c5fc33d0039d80d59bfb1 687 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 11 681 1.5E-269 T 23-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CDG62_03275 ca5760dfc63c5fc33d0039d80d59bfb1 687 Gene3D G3DSA:3.30.870.10 319 501 1.6E-68 T 23-10-2018 CDG62_03275 ca5760dfc63c5fc33d0039d80d59bfb1 687 SUPERFAMILY SSF140356 8 112 5.49E-29 T 23-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 CDG62_03275 ca5760dfc63c5fc33d0039d80d59bfb1 687 Pfam PF02503 Polyphosphate kinase middle domain 126 323 4.6E-58 T 23-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CDG62_05835 7c4e08c705a14851c3aea5ff879e23c6 149 Gene3D G3DSA:2.40.128.520 21 149 1.0E-18 T 23-10-2018 CDG62_05835 7c4e08c705a14851c3aea5ff879e23c6 149 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 26 147 1.5E-27 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG62_05165 f622e72a27fad8b744877c215ae61325 424 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 10 410 2.7E-143 T 23-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 CDG62_05165 f622e72a27fad8b744877c215ae61325 424 Gene3D G3DSA:3.40.50.1950 4 194 4.9E-60 T 23-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CDG62_05165 f622e72a27fad8b744877c215ae61325 424 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 199 382 1.2E-70 T 23-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CDG62_05165 f622e72a27fad8b744877c215ae61325 424 SUPERFAMILY SSF52507 7 186 1.24E-63 T 23-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 CDG62_05165 f622e72a27fad8b744877c215ae61325 424 Pfam PF02441 Flavoprotein 11 182 1.0E-48 T 23-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CDG62_05165 f622e72a27fad8b744877c215ae61325 424 Gene3D G3DSA:3.40.50.10300 197 418 2.6E-77 T 23-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CDG62_05165 f622e72a27fad8b744877c215ae61325 424 SUPERFAMILY SSF102645 198 415 9.29E-73 T 23-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CDG62_09805 2eacd5a473acc8caec57c559b47e6f14 405 Pfam PF13356 Arm DNA-binding domain 2 86 1.0E-16 T 23-10-2018 IPR025166 Integrase, DNA-binding domain CDG62_09805 2eacd5a473acc8caec57c559b47e6f14 405 Gene3D G3DSA:1.10.443.10 209 396 2.9E-21 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG62_09805 2eacd5a473acc8caec57c559b47e6f14 405 Gene3D G3DSA:3.30.160.390 1 87 1.7E-28 T 23-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CDG62_09805 2eacd5a473acc8caec57c559b47e6f14 405 Pfam PF00589 Phage integrase family 215 384 1.4E-18 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG62_09805 2eacd5a473acc8caec57c559b47e6f14 405 SUPERFAMILY SSF56349 97 394 2.83E-50 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG62_09805 2eacd5a473acc8caec57c559b47e6f14 405 Gene3D G3DSA:1.10.150.130 88 208 1.1E-20 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG62_11960 eb7a230c8d9b4a00cc7bb67732531fd8 268 Pfam PF12833 Helix-turn-helix domain 183 259 1.1E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_11960 eb7a230c8d9b4a00cc7bb67732531fd8 268 Gene3D G3DSA:1.10.10.60 220 267 3.1E-12 T 23-10-2018 CDG62_11960 eb7a230c8d9b4a00cc7bb67732531fd8 268 Pfam PF02311 AraC-like ligand binding domain 3 126 1.2E-14 T 23-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CDG62_11960 eb7a230c8d9b4a00cc7bb67732531fd8 268 SMART SM00342 176 258 4.8E-24 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_11960 eb7a230c8d9b4a00cc7bb67732531fd8 268 SUPERFAMILY SSF46689 213 262 2.15E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_11960 eb7a230c8d9b4a00cc7bb67732531fd8 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 2.3E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_11960 eb7a230c8d9b4a00cc7bb67732531fd8 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 2.3E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_11960 eb7a230c8d9b4a00cc7bb67732531fd8 268 SUPERFAMILY SSF51215 10 128 3.14E-13 T 23-10-2018 IPR037923 Transcription regulator HTH-like CDG62_11960 eb7a230c8d9b4a00cc7bb67732531fd8 268 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 213 254 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDG62_11960 eb7a230c8d9b4a00cc7bb67732531fd8 268 Gene3D G3DSA:1.10.10.60 156 219 3.3E-13 T 23-10-2018 CDG62_08555 f2c17236722362102f1c3b7f4238a548 282 SUPERFAMILY SSF75217 14 174 8.5E-36 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG62_08555 f2c17236722362102f1c3b7f4238a548 282 PIRSF PIRSF004808 11 267 2.2E-65 T 23-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 CDG62_08555 f2c17236722362102f1c3b7f4238a548 282 Pfam PF00588 SpoU rRNA Methylase family 16 167 4.8E-33 T 23-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CDG62_08555 f2c17236722362102f1c3b7f4238a548 282 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 14 263 3.0E-66 T 23-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 CDG62_08555 f2c17236722362102f1c3b7f4238a548 282 Gene3D G3DSA:1.10.8.590 191 277 1.4E-21 T 23-10-2018 CDG62_08555 f2c17236722362102f1c3b7f4238a548 282 Gene3D G3DSA:3.40.1280.10 12 178 1.2E-60 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG62_13060 5a6b6c6a5c9e28beb5bb855b19c15dbb 150 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 10 147 27.517 T 23-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 CDG62_13060 5a6b6c6a5c9e28beb5bb855b19c15dbb 150 TIGRFAM TIGR02801 tolR: protein TolR 17 147 1.8E-42 T 23-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 CDG62_13060 5a6b6c6a5c9e28beb5bb855b19c15dbb 150 Gene3D G3DSA:3.30.420.270 63 139 5.1E-11 T 23-10-2018 CDG62_13060 5a6b6c6a5c9e28beb5bb855b19c15dbb 150 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 148 1.3E-25 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CDG62_03860 f8e51722c7f7e10ac31a26e5e47a0971 200 Gene3D G3DSA:1.10.357.10 64 199 5.9E-24 T 23-10-2018 CDG62_03860 f8e51722c7f7e10ac31a26e5e47a0971 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.2E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_03860 f8e51722c7f7e10ac31a26e5e47a0971 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.2E-5 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_03860 f8e51722c7f7e10ac31a26e5e47a0971 200 Gene3D G3DSA:1.10.10.60 2 56 2.7E-15 T 23-10-2018 CDG62_03860 f8e51722c7f7e10ac31a26e5e47a0971 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 1.4E-13 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_03860 f8e51722c7f7e10ac31a26e5e47a0971 200 SUPERFAMILY SSF46689 3 73 6.67E-16 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 23-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 Gene3D G3DSA:3.40.120.10 258 378 1.8E-29 T 23-10-2018 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 SUPERFAMILY SSF53738 8 140 1.02E-29 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 SUPERFAMILY SSF55957 384 462 1.83E-13 T 23-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 11 135 1.5E-27 T 23-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 406 458 5.7E-7 T 23-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 SUPERFAMILY SSF53738 161 262 5.1E-24 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 266 377 9.7E-15 T 23-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 Gene3D G3DSA:3.30.310.50 379 468 2.2E-16 T 23-10-2018 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 Gene3D G3DSA:3.40.120.10 2 145 2.7E-37 T 23-10-2018 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 260 5.2E-24 T 23-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 Gene3D G3DSA:3.40.120.10 179 256 2.3E-25 T 23-10-2018 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 240 255 6.3E-17 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 177 196 6.3E-17 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 211 224 6.3E-17 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 6.3E-17 T 23-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_15845 02a640faa62fb235537e5b009184f7c6 475 SUPERFAMILY SSF53738 266 374 9.42E-21 T 23-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CDG62_08480 3c626fab0356d48194b2178b5c061bb9 325 Gene3D G3DSA:3.10.580.10 196 322 4.6E-45 T 23-10-2018 CDG62_08480 3c626fab0356d48194b2178b5c061bb9 325 SMART SM00116 276 324 4.6E-7 T 23-10-2018 IPR000644 CBS domain CDG62_08480 3c626fab0356d48194b2178b5c061bb9 325 SMART SM00116 210 258 0.024 T 23-10-2018 IPR000644 CBS domain CDG62_08480 3c626fab0356d48194b2178b5c061bb9 325 Pfam PF01380 SIS domain 41 172 1.2E-24 T 23-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CDG62_08480 3c626fab0356d48194b2178b5c061bb9 325 Pfam PF00571 CBS domain 269 322 1.9E-13 T 23-10-2018 IPR000644 CBS domain CDG62_08480 3c626fab0356d48194b2178b5c061bb9 325 Pfam PF00571 CBS domain 201 258 2.8E-6 T 23-10-2018 IPR000644 CBS domain CDG62_08480 3c626fab0356d48194b2178b5c061bb9 325 PIRSF PIRSF004692 1 325 1.5E-132 T 23-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CDG62_08480 3c626fab0356d48194b2178b5c061bb9 325 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 314 1.6E-104 T 23-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CDG62_08480 3c626fab0356d48194b2178b5c061bb9 325 Gene3D G3DSA:3.40.50.10490 6 195 8.9E-59 T 23-10-2018 CDG62_08480 3c626fab0356d48194b2178b5c061bb9 325 SUPERFAMILY SSF53697 7 322 3.11E-64 T 23-10-2018 CDG62_05595 7c6e4eb39a99ebf70eb43d7118ca959a 609 SUPERFAMILY SSF56935 35 608 2.66E-100 T 23-10-2018 CDG62_05595 7c6e4eb39a99ebf70eb43d7118ca959a 609 Pfam PF00593 TonB dependent receptor 201 608 5.7E-41 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_05595 7c6e4eb39a99ebf70eb43d7118ca959a 609 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 154 1.4E-24 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_05595 7c6e4eb39a99ebf70eb43d7118ca959a 609 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 42 - T 23-10-2018 IPR010916 TonB box, conserved site CDG62_05595 7c6e4eb39a99ebf70eb43d7118ca959a 609 Gene3D G3DSA:2.170.130.10 34 158 4.3E-33 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_05595 7c6e4eb39a99ebf70eb43d7118ca959a 609 Gene3D G3DSA:2.40.170.20 161 608 1.2E-69 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_13585 786a5a0f4b56825e7127860ea16755f6 405 SUPERFAMILY SSF56349 97 394 2.88E-46 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG62_13585 786a5a0f4b56825e7127860ea16755f6 405 Pfam PF13356 Arm DNA-binding domain 2 86 2.0E-18 T 23-10-2018 IPR025166 Integrase, DNA-binding domain CDG62_13585 786a5a0f4b56825e7127860ea16755f6 405 Gene3D G3DSA:1.10.150.130 93 214 4.7E-17 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG62_13585 786a5a0f4b56825e7127860ea16755f6 405 Gene3D G3DSA:3.30.160.390 1 87 2.9E-30 T 23-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CDG62_13585 786a5a0f4b56825e7127860ea16755f6 405 Pfam PF00589 Phage integrase family 236 384 5.9E-17 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG62_13585 786a5a0f4b56825e7127860ea16755f6 405 Gene3D G3DSA:1.10.443.10 217 394 2.4E-21 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG62_09150 53a0012d9596510b2fec7157326bb232 389 SUPERFAMILY SSF103473 5 378 2.49E-53 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_09150 53a0012d9596510b2fec7157326bb232 389 Gene3D G3DSA:1.20.1250.20 5 194 6.3E-28 T 23-10-2018 CDG62_09150 53a0012d9596510b2fec7157326bb232 389 Pfam PF07690 Major Facilitator Superfamily 10 342 6.6E-36 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_09150 53a0012d9596510b2fec7157326bb232 389 Gene3D G3DSA:1.20.1250.20 195 379 8.2E-12 T 23-10-2018 CDG62_10435 a354e16dfdfc30edc75b1eb50726d648 343 Pfam PF12146 Serine aminopeptidase, S33 83 318 4.2E-34 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG62_10435 a354e16dfdfc30edc75b1eb50726d648 343 SUPERFAMILY SSF53474 72 327 2.48E-32 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_10435 a354e16dfdfc30edc75b1eb50726d648 343 Gene3D G3DSA:3.40.50.1820 70 338 2.0E-39 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_04915 4abad2fe6f9d1644dd0cbe9cb29539a6 165 Pfam PF14317 YcxB-like protein 103 164 1.3E-6 T 23-10-2018 IPR025588 YcxB-like protein CDG62_16765 92a58cbe8aa3e5274ff99de1167f1706 443 SUPERFAMILY SSF53474 39 307 2.08E-27 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_16765 92a58cbe8aa3e5274ff99de1167f1706 443 Gene3D G3DSA:3.40.50.1820 35 309 9.3E-28 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_16765 92a58cbe8aa3e5274ff99de1167f1706 443 SUPERFAMILY SSF141371 328 439 9.42E-6 T 23-10-2018 CDG62_16765 92a58cbe8aa3e5274ff99de1167f1706 443 Pfam PF00561 alpha/beta hydrolase fold 58 293 4.3E-8 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_18425 418b3ce58c7c669a3ec1d24a63163526 384 Gene3D G3DSA:3.10.350.10 57 102 9.6E-14 T 23-10-2018 IPR036779 LysM domain superfamily CDG62_18425 418b3ce58c7c669a3ec1d24a63163526 384 Pfam PF01476 LysM domain 58 102 7.7E-15 T 23-10-2018 IPR018392 LysM domain CDG62_18425 418b3ce58c7c669a3ec1d24a63163526 384 SUPERFAMILY SSF54106 57 104 2.35E-7 T 23-10-2018 CDG62_09115 5b7a612d306f4f356868a2f574510d19 170 SUPERFAMILY SSF89562 26 169 2.35E-45 T 23-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CDG62_09115 5b7a612d306f4f356868a2f574510d19 170 Gene3D G3DSA:3.50.30.40 4 169 9.8E-62 T 23-10-2018 CDG62_09115 5b7a612d306f4f356868a2f574510d19 170 TIGRFAM TIGR01935 NOT-MenG: RraA family 8 162 1.1E-60 T 23-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 CDG62_09115 5b7a612d306f4f356868a2f574510d19 170 Pfam PF03737 Aldolase/RraA 8 162 6.8E-45 T 23-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CDG62_19025 39206e658621566c4d9e8fa7884faa4b 319 Gene3D G3DSA:3.40.190.10 117 216 2.3E-105 T 23-10-2018 CDG62_19025 39206e658621566c4d9e8fa7884faa4b 319 Gene3D G3DSA:3.40.190.10 38 310 2.3E-105 T 23-10-2018 CDG62_19025 39206e658621566c4d9e8fa7884faa4b 319 SUPERFAMILY SSF53850 37 266 3.32E-48 T 23-10-2018 CDG62_19025 39206e658621566c4d9e8fa7884faa4b 319 Gene3D G3DSA:1.10.8.450 248 280 2.3E-105 T 23-10-2018 CDG62_19025 39206e658621566c4d9e8fa7884faa4b 319 Pfam PF09084 NMT1/THI5 like 63 257 6.6E-17 T 23-10-2018 IPR015168 SsuA/THI5-like CDG62_19025 39206e658621566c4d9e8fa7884faa4b 319 SMART SM00062 37 253 1.1E-19 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG62_19025 39206e658621566c4d9e8fa7884faa4b 319 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 47 317 3.8E-69 T 23-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 CDG62_17965 d00d227cb95118717b7db15f5f8b4232 146 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 94 144 5.0E-17 T 23-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG62_17965 d00d227cb95118717b7db15f5f8b4232 146 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 93 121 - T 23-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG62_17965 d00d227cb95118717b7db15f5f8b4232 146 Hamap MF_00422 Protein translocase subunit SecE [secE]. 88 143 12.522 T 23-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG62_17965 d00d227cb95118717b7db15f5f8b4232 146 PRINTS PR01650 Bacterial translocase SecE signature 87 107 5.9E-17 T 23-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CDG62_17965 d00d227cb95118717b7db15f5f8b4232 146 PRINTS PR01650 Bacterial translocase SecE signature 131 146 5.9E-17 T 23-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CDG62_17965 d00d227cb95118717b7db15f5f8b4232 146 PRINTS PR01650 Bacterial translocase SecE signature 66 87 5.9E-17 T 23-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CDG62_17965 d00d227cb95118717b7db15f5f8b4232 146 PRINTS PR01650 Bacterial translocase SecE signature 111 131 5.9E-17 T 23-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CDG62_17965 d00d227cb95118717b7db15f5f8b4232 146 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 91 145 2.2E-18 T 23-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 CDG62_17965 d00d227cb95118717b7db15f5f8b4232 146 Gene3D G3DSA:1.20.5.1030 88 144 9.7E-16 T 23-10-2018 IPR038379 SecE superfamily CDG62_09105 cb670d868c4414496a863d6bb93f3bdf 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.852 T 23-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_09105 cb670d868c4414496a863d6bb93f3bdf 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 88 3.0E-28 T 23-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_09105 cb670d868c4414496a863d6bb93f3bdf 88 Gene3D G3DSA:1.20.58.110 1 87 8.3E-28 T 23-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_09105 cb670d868c4414496a863d6bb93f3bdf 88 Pfam PF01649 Ribosomal protein S20 2 84 4.8E-26 T 23-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_09105 cb670d868c4414496a863d6bb93f3bdf 88 SUPERFAMILY SSF46992 3 86 3.79E-31 T 23-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_09105 cb670d868c4414496a863d6bb93f3bdf 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 3.6E-28 T 23-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_11685 7162674f09042577695ed0677fd81abb 408 Gene3D G3DSA:1.20.1250.20 2 201 1.1E-16 T 23-10-2018 CDG62_11685 7162674f09042577695ed0677fd81abb 408 Pfam PF07690 Major Facilitator Superfamily 10 284 1.2E-17 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_11685 7162674f09042577695ed0677fd81abb 408 SUPERFAMILY SSF103473 8 396 1.44E-35 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_11685 7162674f09042577695ed0677fd81abb 408 Gene3D G3DSA:1.20.1250.20 212 404 2.0E-11 T 23-10-2018 CDG62_06135 38f92024ac208a885d99dcbcbc65b9da 121 Gene3D G3DSA:3.30.429.10 1 121 1.0E-31 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily CDG62_06135 38f92024ac208a885d99dcbcbc65b9da 121 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 95 1.9E-7 T 23-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 CDG62_06135 38f92024ac208a885d99dcbcbc65b9da 121 SUPERFAMILY SSF55331 2 118 1.83E-25 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily CDG62_09215 cb7c3fb13086c035e3c747cf04f2b016 554 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 85 108 - T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CDG62_09215 cb7c3fb13086c035e3c747cf04f2b016 554 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 4 554 59.759 T 23-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CDG62_09215 cb7c3fb13086c035e3c747cf04f2b016 554 Pfam PF05199 GMC oxidoreductase 397 531 4.0E-41 T 23-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CDG62_09215 cb7c3fb13086c035e3c747cf04f2b016 554 Gene3D G3DSA:3.50.50.60 6 535 2.1E-175 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_09215 cb7c3fb13086c035e3c747cf04f2b016 554 TIGRFAM TIGR01810 betA: choline dehydrogenase 7 541 2.1E-280 T 23-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CDG62_09215 cb7c3fb13086c035e3c747cf04f2b016 554 Gene3D G3DSA:4.10.450.10 39 202 2.1E-175 T 23-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 CDG62_09215 cb7c3fb13086c035e3c747cf04f2b016 554 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 263 277 - T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CDG62_09215 cb7c3fb13086c035e3c747cf04f2b016 554 SUPERFAMILY SSF51905 1 539 7.2E-87 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_09215 cb7c3fb13086c035e3c747cf04f2b016 554 Gene3D G3DSA:3.30.410.40 155 478 2.1E-175 T 23-10-2018 CDG62_09215 cb7c3fb13086c035e3c747cf04f2b016 554 SUPERFAMILY SSF54373 299 481 8.44E-63 T 23-10-2018 CDG62_09215 cb7c3fb13086c035e3c747cf04f2b016 554 Gene3D G3DSA:1.10.1220.110 100 154 2.1E-175 T 23-10-2018 CDG62_09215 cb7c3fb13086c035e3c747cf04f2b016 554 Pfam PF00732 GMC oxidoreductase 6 304 2.9E-96 T 23-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CDG62_09215 cb7c3fb13086c035e3c747cf04f2b016 554 PIRSF PIRSF000137 1 544 3.2E-140 T 23-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CDG62_08385 48439560b1876ac41e9d0cdf22e76dc9 257 SMART SM00563 38 155 7.1E-9 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_08385 48439560b1876ac41e9d0cdf22e76dc9 257 SUPERFAMILY SSF69593 19 161 1.06E-9 T 23-10-2018 CDG62_08385 48439560b1876ac41e9d0cdf22e76dc9 257 Pfam PF01553 Acyltransferase 26 150 1.9E-12 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_07590 a2deeaf0099964045c899e34120b3267 307 PIRSF PIRSF036594 1 304 3.4E-67 T 23-10-2018 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823 CDG62_07590 a2deeaf0099964045c899e34120b3267 307 Pfam PF01967 MoaC family 1 136 4.4E-42 T 23-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDG62_07590 a2deeaf0099964045c899e34120b3267 307 SUPERFAMILY SSF53218 147 298 1.19E-37 T 23-10-2018 IPR036425 MoaB/Mog-like domain superfamily CDG62_07590 a2deeaf0099964045c899e34120b3267 307 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 149 287 6.3E-28 T 23-10-2018 IPR001453 MoaB/Mog domain CDG62_07590 a2deeaf0099964045c899e34120b3267 307 Gene3D G3DSA:3.30.70.640 1 147 1.3E-48 T 23-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDG62_07590 a2deeaf0099964045c899e34120b3267 307 Pfam PF00994 Probable molybdopterin binding domain 151 291 3.1E-30 T 23-10-2018 IPR001453 MoaB/Mog domain CDG62_07590 a2deeaf0099964045c899e34120b3267 307 SUPERFAMILY SSF55040 1 140 2.75E-44 T 23-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CDG62_07590 a2deeaf0099964045c899e34120b3267 307 Gene3D G3DSA:3.40.980.10 148 302 6.8E-46 T 23-10-2018 IPR036425 MoaB/Mog-like domain superfamily CDG62_07590 a2deeaf0099964045c899e34120b3267 307 SMART SM00852 151 293 3.1E-21 T 23-10-2018 IPR001453 MoaB/Mog domain CDG62_12960 c5ec0201bc26aba1c73dd548feffa4cb 230 Gene3D G3DSA:3.90.1490.10 135 227 5.9E-14 T 23-10-2018 CDG62_12960 c5ec0201bc26aba1c73dd548feffa4cb 230 Pfam PF01902 Diphthamide synthase 13 225 1.9E-43 T 23-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 CDG62_12960 c5ec0201bc26aba1c73dd548feffa4cb 230 Gene3D G3DSA:3.40.50.620 9 133 5.0E-24 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_12960 c5ec0201bc26aba1c73dd548feffa4cb 230 SUPERFAMILY SSF52402 12 225 5.51E-56 T 23-10-2018 CDG62_12960 c5ec0201bc26aba1c73dd548feffa4cb 230 TIGRFAM TIGR00290 MJ0570_dom: MJ0570-related uncharacterized domain 13 225 4.8E-44 T 23-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 SUPERFAMILY SSF55307 209 325 2.98E-37 T 23-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 SMART SM00864 19 210 4.7E-112 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 SMART SM00865 212 331 8.0E-46 T 23-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 Pfam PF12327 FtsZ family, C-terminal domain 227 322 6.4E-30 T 23-10-2018 IPR024757 Cell division protein FtsZ, C-terminal CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 15 369 36.049 T 23-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 SUPERFAMILY SSF52490 18 213 4.32E-69 T 23-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 ProSitePatterns PS01134 FtsZ protein signature 1. 50 84 - T 23-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 Gene3D G3DSA:3.30.1330.20 226 339 1.2E-33 T 23-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 PRINTS PR00423 Cell division protein FtsZ signature 132 153 2.0E-45 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 PRINTS PR00423 Cell division protein FtsZ signature 194 216 2.0E-45 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 PRINTS PR00423 Cell division protein FtsZ signature 104 124 2.0E-45 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 PRINTS PR00423 Cell division protein FtsZ signature 217 238 2.0E-45 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 ProSitePatterns PS01135 FtsZ protein signature 2. 103 124 - T 23-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 334 2.8E-125 T 23-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 Gene3D G3DSA:3.40.50.1440 9 225 2.4E-80 T 23-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 CDG62_03550 dba9c615d71342c4a1c7d2643c2b0545 398 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 21 178 2.2E-43 T 23-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CDG62_19020 23eedcecdbff3b4d285b35645ea73a6f 450 Gene3D G3DSA:3.40.1160.10 14 297 9.7E-89 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG62_19020 23eedcecdbff3b4d285b35645ea73a6f 450 Pfam PF00583 Acetyltransferase (GNAT) family 328 410 2.4E-8 T 23-10-2018 IPR000182 GNAT domain CDG62_19020 23eedcecdbff3b4d285b35645ea73a6f 450 Pfam PF00696 Amino acid kinase family 33 273 8.5E-24 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDG62_19020 23eedcecdbff3b4d285b35645ea73a6f 450 SUPERFAMILY SSF55729 302 426 1.69E-17 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_19020 23eedcecdbff3b4d285b35645ea73a6f 450 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 16 450 2.9E-183 T 23-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CDG62_19020 23eedcecdbff3b4d285b35645ea73a6f 450 SUPERFAMILY SSF53633 11 297 2.79E-68 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG62_19020 23eedcecdbff3b4d285b35645ea73a6f 450 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 450 203.073 T 23-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CDG62_19020 23eedcecdbff3b4d285b35645ea73a6f 450 PIRSF PIRSF000423 6 450 1.8E-191 T 23-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CDG62_19020 23eedcecdbff3b4d285b35645ea73a6f 450 Gene3D G3DSA:3.40.630.30 298 450 2.5E-36 T 23-10-2018 CDG62_01135 436e64f7ddf25f8e4f3f8bef03b3a1b5 2210 SUPERFAMILY SSF52540 885 1527 1.58E-9 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_01135 436e64f7ddf25f8e4f3f8bef03b3a1b5 2210 SMART SM00490 1385 1499 6.7E-5 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_01135 436e64f7ddf25f8e4f3f8bef03b3a1b5 2210 SUPERFAMILY SSF52540 865 1032 2.27E-12 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_01135 436e64f7ddf25f8e4f3f8bef03b3a1b5 2210 SUPERFAMILY SSF53335 230 496 2.76E-22 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_01135 436e64f7ddf25f8e4f3f8bef03b3a1b5 2210 Gene3D G3DSA:3.40.50.150 269 520 8.5E-18 T 23-10-2018 CDG62_01135 436e64f7ddf25f8e4f3f8bef03b3a1b5 2210 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 369 375 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG62_01135 436e64f7ddf25f8e4f3f8bef03b3a1b5 2210 Pfam PF13871 C-terminal domain on Strawberry notch homologue 1397 1627 5.3E-16 T 23-10-2018 IPR026937 Strawberry notch, helicase C domain CDG62_01135 436e64f7ddf25f8e4f3f8bef03b3a1b5 2210 Pfam PF04851 Type III restriction enzyme, res subunit 867 1021 1.9E-7 T 23-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CDG62_01135 436e64f7ddf25f8e4f3f8bef03b3a1b5 2210 Gene3D G3DSA:3.40.50.300 863 1070 4.5E-9 T 23-10-2018 CDG62_01135 436e64f7ddf25f8e4f3f8bef03b3a1b5 2210 Gene3D G3DSA:3.40.50.300 1366 1526 7.7E-7 T 23-10-2018 CDG62_04470 1721acd8b6c5ccd61c6403e355887b1c 84 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 25.375 T 23-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04470 1721acd8b6c5ccd61c6403e355887b1c 84 Gene3D G3DSA:2.30.170.50 1 82 1.3E-22 T 23-10-2018 CDG62_04470 1721acd8b6c5ccd61c6403e355887b1c 84 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.2E-15 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04470 1721acd8b6c5ccd61c6403e355887b1c 84 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.2E-15 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04470 1721acd8b6c5ccd61c6403e355887b1c 84 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.2E-15 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04470 1721acd8b6c5ccd61c6403e355887b1c 84 SUPERFAMILY SSF143800 1 80 1.53E-22 T 23-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04470 1721acd8b6c5ccd61c6403e355887b1c 84 Pfam PF01197 Ribosomal protein L31 1 78 2.4E-25 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04470 1721acd8b6c5ccd61c6403e355887b1c 84 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04470 1721acd8b6c5ccd61c6403e355887b1c 84 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 4.8E-17 T 23-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_13135 01c2af6a0d0a744dfc7d724d4fa4abfb 356 Gene3D G3DSA:3.90.650.10 176 347 8.2E-67 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG62_13135 01c2af6a0d0a744dfc7d724d4fa4abfb 356 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 342 5.0E-35 T 23-10-2018 IPR010918 PurM-like, C-terminal domain CDG62_13135 01c2af6a0d0a744dfc7d724d4fa4abfb 356 SUPERFAMILY SSF56042 176 342 5.83E-60 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG62_13135 01c2af6a0d0a744dfc7d724d4fa4abfb 356 Gene3D G3DSA:3.30.1330.10 11 175 1.2E-66 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG62_13135 01c2af6a0d0a744dfc7d724d4fa4abfb 356 SUPERFAMILY SSF55326 12 175 8.07E-52 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG62_13135 01c2af6a0d0a744dfc7d724d4fa4abfb 356 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 169 4.0E-15 T 23-10-2018 IPR016188 PurM-like, N-terminal domain CDG62_13135 01c2af6a0d0a744dfc7d724d4fa4abfb 356 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 339 1.2E-141 T 23-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG62_13135 01c2af6a0d0a744dfc7d724d4fa4abfb 356 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 354 46.646 T 23-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 SUPERFAMILY SSF53671 2 301 2.62E-99 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 5.3E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 5.3E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 5.3E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 216 226 5.3E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 278 289 5.3E-30 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 144 1.3E-48 T 23-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 Gene3D G3DSA:3.40.50.1370 4 133 3.1E-109 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 296 5.9E-49 T 23-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.3E-23 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 1.3E-23 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 287 1.3E-23 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 252 261 1.3E-23 T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 300 77.332 T 23-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 300 1.2E-112 T 23-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 Gene3D G3DSA:3.40.50.1370 134 294 3.1E-109 T 23-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 CDG62_09360 1b342b7b891fed13dade9b21c323e7c1 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 23-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CDG62_18115 99337800d3b9935004f9114d1963bbe1 287 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 233 2.0E-43 T 23-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CDG62_18115 99337800d3b9935004f9114d1963bbe1 287 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 283 38.135 T 23-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 CDG62_18115 99337800d3b9935004f9114d1963bbe1 287 Gene3D G3DSA:3.40.50.620 78 214 2.0E-99 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_18115 99337800d3b9935004f9114d1963bbe1 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 166 176 2.2E-15 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG62_18115 99337800d3b9935004f9114d1963bbe1 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 190 2.2E-15 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG62_18115 99337800d3b9935004f9114d1963bbe1 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 2.2E-15 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG62_18115 99337800d3b9935004f9114d1963bbe1 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.2E-15 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG62_18115 99337800d3b9935004f9114d1963bbe1 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 2.2E-15 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG62_18115 99337800d3b9935004f9114d1963bbe1 287 SUPERFAMILY SSF52374 3 274 1.02E-76 T 23-10-2018 CDG62_18115 99337800d3b9935004f9114d1963bbe1 287 Gene3D G3DSA:3.40.50.620 3 277 2.0E-99 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_18115 99337800d3b9935004f9114d1963bbe1 287 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 255 4.8E-104 T 23-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 CDG62_06320 8ec5be1c8b4e4bce1168461682a97909 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 309 6.6E-37 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_06320 8ec5be1c8b4e4bce1168461682a97909 312 Gene3D G3DSA:1.10.3720.10 84 306 1.5E-19 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_06320 8ec5be1c8b4e4bce1168461682a97909 312 SUPERFAMILY SSF161098 93 295 6.67E-14 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_07455 d532aa8e79b802b940c873348c897af8 311 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 255 281 - T 23-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 CDG62_07455 d532aa8e79b802b940c873348c897af8 311 Pfam PF01012 Electron transfer flavoprotein domain 4 171 1.2E-40 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDG62_07455 d532aa8e79b802b940c873348c897af8 311 SMART SM00893 3 183 1.6E-53 T 23-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CDG62_07455 d532aa8e79b802b940c873348c897af8 311 Gene3D G3DSA:3.40.50.1220 185 311 4.4E-54 T 23-10-2018 CDG62_07455 d532aa8e79b802b940c873348c897af8 311 SUPERFAMILY SSF52467 190 310 2.05E-44 T 23-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily CDG62_07455 d532aa8e79b802b940c873348c897af8 311 Gene3D G3DSA:3.40.50.620 2 184 2.8E-54 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_07455 d532aa8e79b802b940c873348c897af8 311 PIRSF PIRSF000089 1 311 4.1E-102 T 23-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CDG62_07455 d532aa8e79b802b940c873348c897af8 311 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 191 274 3.9E-34 T 23-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CDG62_07455 d532aa8e79b802b940c873348c897af8 311 SUPERFAMILY SSF52402 2 187 2.51E-57 T 23-10-2018 CDG62_12510 c87cbbaeafed131794d816f4b63fe03b 349 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 24 311 2.4E-49 T 23-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal CDG62_12510 c87cbbaeafed131794d816f4b63fe03b 349 Gene3D G3DSA:3.60.60.10 24 348 1.0E-127 T 23-10-2018 CDG62_12510 c87cbbaeafed131794d816f4b63fe03b 349 SUPERFAMILY SSF56235 24 327 3.86E-98 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG62_12725 873b058c98e6e1d0966638a1cf9e66c3 126 SUPERFAMILY SSF46785 13 118 1.41E-30 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_12725 873b058c98e6e1d0966638a1cf9e66c3 126 Pfam PF01638 HxlR-like helix-turn-helix 27 113 1.7E-26 T 23-10-2018 IPR002577 Helix-turn-helix, HxlR type CDG62_12725 873b058c98e6e1d0966638a1cf9e66c3 126 Gene3D G3DSA:1.10.10.10 1 124 2.7E-37 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_18500 934b78ae6973bed3ade45c9bf7da81ad 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 6.0E-25 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18500 934b78ae6973bed3ade45c9bf7da81ad 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 6.0E-25 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18500 934b78ae6973bed3ade45c9bf7da81ad 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 6.0E-25 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18500 934b78ae6973bed3ade45c9bf7da81ad 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 6.0E-25 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18500 934b78ae6973bed3ade45c9bf7da81ad 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 6.0E-25 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18500 934b78ae6973bed3ade45c9bf7da81ad 178 SUPERFAMILY SSF47928 3 106 2.88E-25 T 23-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18500 934b78ae6973bed3ade45c9bf7da81ad 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 176 3.0E-43 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18500 934b78ae6973bed3ade45c9bf7da81ad 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 18.754 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18500 934b78ae6973bed3ade45c9bf7da81ad 178 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 23-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18500 934b78ae6973bed3ade45c9bf7da81ad 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 4.3E-52 T 23-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18500 934b78ae6973bed3ade45c9bf7da81ad 178 Gene3D G3DSA:1.10.520.20 2 107 1.1E-30 T 23-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CDG62_18245 252a91d07e102e1dd311b222081b5d7b 152 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 152 81.467 T 23-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CDG62_18245 252a91d07e102e1dd311b222081b5d7b 152 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.3E-60 T 23-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CDG62_18245 252a91d07e102e1dd311b222081b5d7b 152 Pfam PF03477 ATP cone domain 50 136 4.8E-18 T 23-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CDG62_12900 5ed03e5828abb15f721e5952cfca453b 336 SUPERFAMILY SSF53850 25 330 8.08E-87 T 23-10-2018 CDG62_12900 5ed03e5828abb15f721e5952cfca453b 336 Gene3D G3DSA:3.40.190.10 118 328 4.2E-130 T 23-10-2018 CDG62_12900 5ed03e5828abb15f721e5952cfca453b 336 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 24 329 1.2E-144 T 23-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CDG62_12900 5ed03e5828abb15f721e5952cfca453b 336 Gene3D G3DSA:3.40.190.10 30 298 4.2E-130 T 23-10-2018 CDG62_12900 5ed03e5828abb15f721e5952cfca453b 336 Pfam PF13531 Bacterial extracellular solute-binding protein 44 283 2.1E-42 T 23-10-2018 CDG62_12900 5ed03e5828abb15f721e5952cfca453b 336 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 149 157 - T 23-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 CDG62_16725 a936d4cdc30775096652393fc68051e2 316 Gene3D G3DSA:3.90.640.20 210 305 1.7E-26 T 23-10-2018 IPR037126 PdaC/RsiV-like superfamily CDG62_16725 a936d4cdc30775096652393fc68051e2 316 Pfam PF11738 Protein of unknown function (DUF3298) 213 289 4.5E-8 T 23-10-2018 IPR021729 Domain of unknown function DUF3298 CDG62_14695 7d4cfcecb0da229c248d20f923edd1dd 240 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 115 131 - T 23-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 CDG62_14695 7d4cfcecb0da229c248d20f923edd1dd 240 Pfam PF00194 Eukaryotic-type carbonic anhydrase 26 238 2.3E-41 T 23-10-2018 IPR001148 Alpha carbonic anhydrase domain CDG62_14695 7d4cfcecb0da229c248d20f923edd1dd 240 SUPERFAMILY SSF51069 26 238 2.09E-63 T 23-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily CDG62_14695 7d4cfcecb0da229c248d20f923edd1dd 240 Gene3D G3DSA:3.10.200.10 24 240 1.9E-70 T 23-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily CDG62_14695 7d4cfcecb0da229c248d20f923edd1dd 240 SMART SM01057 27 239 9.2E-74 T 23-10-2018 IPR001148 Alpha carbonic anhydrase domain CDG62_04065 a5056c8108aa7253d8cc9e9cc5a3a518 254 SMART SM00448 21 132 2.2E-43 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_04065 a5056c8108aa7253d8cc9e9cc5a3a518 254 Pfam PF00072 Response regulator receiver domain 23 133 1.7E-29 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_04065 a5056c8108aa7253d8cc9e9cc5a3a518 254 Pfam PF00486 Transcriptional regulatory protein, C terminal 172 248 2.8E-21 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_04065 a5056c8108aa7253d8cc9e9cc5a3a518 254 SUPERFAMILY SSF52172 22 143 6.69E-42 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_04065 a5056c8108aa7253d8cc9e9cc5a3a518 254 SMART SM00862 172 248 3.7E-22 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_04065 a5056c8108aa7253d8cc9e9cc5a3a518 254 SUPERFAMILY SSF46894 150 250 2.49E-26 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG62_04065 a5056c8108aa7253d8cc9e9cc5a3a518 254 Gene3D G3DSA:3.40.50.2300 7 141 1.9E-40 T 23-10-2018 CDG62_04065 a5056c8108aa7253d8cc9e9cc5a3a518 254 Gene3D G3DSA:1.10.10.10 146 254 7.4E-37 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_03725 74e573c56f554490a8eef9b8b3671bf9 229 Pfam PF07885 Ion channel 132 214 1.7E-6 T 23-10-2018 IPR013099 Potassium channel domain CDG62_03725 74e573c56f554490a8eef9b8b3671bf9 229 SUPERFAMILY SSF81324 121 215 2.62E-10 T 23-10-2018 CDG62_03725 74e573c56f554490a8eef9b8b3671bf9 229 Gene3D G3DSA:1.10.287.70 118 217 5.6E-10 T 23-10-2018 CDG62_19100 c84e17b0ebaf824c7686a624acef0713 385 Pfam PF07995 Glucose / Sorbosone dehydrogenase 54 380 2.8E-118 T 23-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase CDG62_19100 c84e17b0ebaf824c7686a624acef0713 385 Gene3D G3DSA:2.120.10.30 44 384 8.3E-96 T 23-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDG62_19100 c84e17b0ebaf824c7686a624acef0713 385 SUPERFAMILY SSF50952 51 373 9.68E-39 T 23-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 PIRSF PIRSF036643 878 930 13.0 T 23-10-2018 CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 PIRSF PIRSF036643 2 759 2.0E-153 T 23-10-2018 CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 Gene3D G3DSA:1.10.10.1100 873 928 2.7E-5 T 23-10-2018 CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 17 72 2.6E-17 T 23-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 Pfam PF01568 Molydopterin dinucleotide binding domain 618 729 2.4E-31 T 23-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 SUPERFAMILY SSF53706 17 620 2.75E-182 T 23-10-2018 CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 SMART SM00926 17 74 1.6E-17 T 23-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 Pfam PF00384 Molybdopterin oxidoreductase 90 504 5.2E-78 T 23-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 Gene3D G3DSA:3.40.50.740 92 532 9.3E-169 T 23-10-2018 CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 22 40 - T 23-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 Gene3D G3DSA:3.40.228.10 155 356 9.3E-169 T 23-10-2018 CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 SUPERFAMILY SSF50692 610 747 4.07E-41 T 23-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 Pfam PF04324 BFD-like [2Fe-2S] binding domain 873 922 1.4E-11 T 23-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 Gene3D G3DSA:2.20.25.90 17 73 6.0E-15 T 23-10-2018 CDG62_08420 093b3e1bce18f13f0de15bda286874d2 930 Gene3D G3DSA:2.40.40.20 615 735 2.5E-39 T 23-10-2018 CDG62_18735 2e1325e2b0d2ed8e64e1ced0f34c0236 774 SUPERFAMILY SSF82866 591 758 3.01E-21 T 23-10-2018 CDG62_18735 2e1325e2b0d2ed8e64e1ced0f34c0236 774 SUPERFAMILY SSF82866 183 400 3.66E-19 T 23-10-2018 CDG62_18735 2e1325e2b0d2ed8e64e1ced0f34c0236 774 Gene3D G3DSA:1.20.1640.10 592 703 1.0E-6 T 23-10-2018 CDG62_18735 2e1325e2b0d2ed8e64e1ced0f34c0236 774 Gene3D G3DSA:1.20.1640.10 224 406 3.1E-5 T 23-10-2018 CDG62_14140 a71184c021256d2684e6aab6acaeb349 224 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 11 223 8.6E-97 T 23-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_14140 a71184c021256d2684e6aab6acaeb349 224 Pfam PF00912 Transglycosylase 53 218 1.6E-57 T 23-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_14140 a71184c021256d2684e6aab6acaeb349 224 Gene3D G3DSA:1.10.3810.10 47 223 7.4E-60 T 23-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_14140 a71184c021256d2684e6aab6acaeb349 224 SUPERFAMILY SSF53955 51 220 2.39E-60 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG62_14140 a71184c021256d2684e6aab6acaeb349 224 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 4 224 38.305 T 23-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_10025 fd08295538b7201642c5579c9384b49d 403 SUPERFAMILY SSF56796 13 390 1.05E-136 T 23-10-2018 CDG62_10025 fd08295538b7201642c5579c9384b49d 403 Gene3D G3DSA:1.20.1090.10 193 391 4.7E-78 T 23-10-2018 CDG62_10025 fd08295538b7201642c5579c9384b49d 403 Pfam PF00465 Iron-containing alcohol dehydrogenase 20 382 2.8E-127 T 23-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CDG62_10025 fd08295538b7201642c5579c9384b49d 403 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 267 287 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CDG62_10025 fd08295538b7201642c5579c9384b49d 403 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 180 208 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CDG62_10025 fd08295538b7201642c5579c9384b49d 403 Gene3D G3DSA:3.40.50.1970 3 191 3.7E-55 T 23-10-2018 CDG62_07370 fdda9fc791b4f10f582c51c1d03cfb1f 208 SUPERFAMILY SSF54719 90 200 9.3E-42 T 23-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07370 fdda9fc791b4f10f582c51c1d03cfb1f 208 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 5 88 1.2E-33 T 23-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07370 fdda9fc791b4f10f582c51c1d03cfb1f 208 SUPERFAMILY SSF46609 3 88 2.36E-35 T 23-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07370 fdda9fc791b4f10f582c51c1d03cfb1f 208 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 23-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07370 fdda9fc791b4f10f582c51c1d03cfb1f 208 Gene3D G3DSA:1.10.287.990 21 88 3.6E-26 T 23-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07370 fdda9fc791b4f10f582c51c1d03cfb1f 208 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 7.3E-22 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07370 fdda9fc791b4f10f582c51c1d03cfb1f 208 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 7.3E-22 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07370 fdda9fc791b4f10f582c51c1d03cfb1f 208 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 7.3E-22 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07370 fdda9fc791b4f10f582c51c1d03cfb1f 208 PRINTS PR01703 Manganese superoxide dismutase signature 71 84 7.3E-22 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07370 fdda9fc791b4f10f582c51c1d03cfb1f 208 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 7.3E-22 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07370 fdda9fc791b4f10f582c51c1d03cfb1f 208 Gene3D G3DSA:2.40.500.20 91 207 3.2E-41 T 23-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07370 fdda9fc791b4f10f582c51c1d03cfb1f 208 PIRSF PIRSF000349 1 208 1.1E-80 T 23-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_07370 fdda9fc791b4f10f582c51c1d03cfb1f 208 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 2.6E-36 T 23-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 CDG62_18325 f234eadb8cb3b829e2074f6f539a1822 526 Pfam PF03741 Integral membrane protein TerC family 16 205 5.4E-50 T 23-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 CDG62_18325 f234eadb8cb3b829e2074f6f539a1822 526 Gene3D G3DSA:3.30.465.10 440 521 1.3E-19 T 23-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 CDG62_18325 f234eadb8cb3b829e2074f6f539a1822 526 SMART SM01091 439 519 1.3E-24 T 23-10-2018 IPR005170 Transporter-associated domain CDG62_18325 f234eadb8cb3b829e2074f6f539a1822 526 Gene3D G3DSA:3.10.580.10 290 439 9.8E-37 T 23-10-2018 CDG62_18325 f234eadb8cb3b829e2074f6f539a1822 526 Pfam PF03471 Transporter associated domain 440 517 3.2E-18 T 23-10-2018 IPR005170 Transporter-associated domain CDG62_18325 f234eadb8cb3b829e2074f6f539a1822 526 SUPERFAMILY SSF54631 295 428 3.42E-19 T 23-10-2018 CDG62_18325 f234eadb8cb3b829e2074f6f539a1822 526 SUPERFAMILY SSF56176 435 517 2.73E-19 T 23-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 CDG62_07830 6102a7373ae8c5c05a473ee132b03c92 798 Pfam PF00912 Transglycosylase 153 323 5.2E-60 T 23-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_07830 6102a7373ae8c5c05a473ee132b03c92 798 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 157 692 5.5E-157 T 23-10-2018 CDG62_07830 6102a7373ae8c5c05a473ee132b03c92 798 Gene3D G3DSA:3.40.710.10 48 703 4.3E-244 T 23-10-2018 CDG62_07830 6102a7373ae8c5c05a473ee132b03c92 798 Gene3D G3DSA:3.30.2060.10 56 144 4.3E-244 T 23-10-2018 CDG62_07830 6102a7373ae8c5c05a473ee132b03c92 798 Gene3D G3DSA:1.10.3810.10 145 347 4.3E-244 T 23-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_07830 6102a7373ae8c5c05a473ee132b03c92 798 Pfam PF14814 Bifunctional transglycosylase second domain 59 141 1.7E-21 T 23-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_07830 6102a7373ae8c5c05a473ee132b03c92 798 SUPERFAMILY SSF53955 143 345 8.15E-69 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG62_07830 6102a7373ae8c5c05a473ee132b03c92 798 Pfam PF00905 Penicillin binding protein transpeptidase domain 417 677 2.9E-24 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDG62_07830 6102a7373ae8c5c05a473ee132b03c92 798 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 15 733 3.0E-240 T 23-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_07830 6102a7373ae8c5c05a473ee132b03c92 798 SUPERFAMILY SSF56601 305 746 5.18E-115 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG62_07830 6102a7373ae8c5c05a473ee132b03c92 798 PIRSF PIRSF002799 1 783 0.0 T 23-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CDG62_16480 a7b9d5cfda110bb82ffcda50f6f599e7 768 Pfam PF02824 TGS domain 434 493 3.4E-18 T 23-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CDG62_16480 a7b9d5cfda110bb82ffcda50f6f599e7 768 SUPERFAMILY SSF81271 433 493 3.49E-18 T 23-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CDG62_16480 a7b9d5cfda110bb82ffcda50f6f599e7 768 SUPERFAMILY SSF81301 231 388 6.38E-59 T 23-10-2018 CDG62_16480 a7b9d5cfda110bb82ffcda50f6f599e7 768 Gene3D G3DSA:3.30.70.260 690 767 3.6E-17 T 23-10-2018 CDG62_16480 a7b9d5cfda110bb82ffcda50f6f599e7 768 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 77 762 1.1E-169 T 23-10-2018 IPR004811 RelA/SpoT family GO:0015969 CDG62_16480 a7b9d5cfda110bb82ffcda50f6f599e7 768 Pfam PF13291 ACT domain 689 763 3.7E-18 T 23-10-2018 IPR002912 ACT domain CDG62_16480 a7b9d5cfda110bb82ffcda50f6f599e7 768 Pfam PF13328 HD domain 69 214 6.7E-36 T 23-10-2018 IPR003607 HD/PDEase domain CDG62_16480 a7b9d5cfda110bb82ffcda50f6f599e7 768 Pfam PF04607 Region found in RelA / SpoT proteins 274 383 6.3E-34 T 23-10-2018 IPR007685 RelA/SpoT GO:0015969 CDG62_16480 a7b9d5cfda110bb82ffcda50f6f599e7 768 Gene3D G3DSA:1.10.3210.10 24 230 4.3E-40 T 23-10-2018 CDG62_16480 a7b9d5cfda110bb82ffcda50f6f599e7 768 SUPERFAMILY SSF109604 31 229 2.1E-43 T 23-10-2018 CDG62_16480 a7b9d5cfda110bb82ffcda50f6f599e7 768 Gene3D G3DSA:3.10.20.30 430 502 2.1E-28 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG62_16480 a7b9d5cfda110bb82ffcda50f6f599e7 768 SUPERFAMILY SSF55021 689 765 1.33E-12 T 23-10-2018 CDG62_16480 a7b9d5cfda110bb82ffcda50f6f599e7 768 Gene3D G3DSA:3.30.460.10 232 363 2.8E-50 T 23-10-2018 CDG62_16480 a7b9d5cfda110bb82ffcda50f6f599e7 768 SMART SM00954 274 383 1.7E-59 T 23-10-2018 IPR007685 RelA/SpoT GO:0015969 CDG62_14495 2510b0a4a5b66fc35d87bf56b5a9fd32 122 Pfam PF00072 Response regulator receiver domain 4 115 2.9E-26 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_14495 2510b0a4a5b66fc35d87bf56b5a9fd32 122 Gene3D G3DSA:3.40.50.12740 1 122 6.0E-42 T 23-10-2018 CDG62_14495 2510b0a4a5b66fc35d87bf56b5a9fd32 122 SMART SM00448 2 115 8.4E-38 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_14495 2510b0a4a5b66fc35d87bf56b5a9fd32 122 SUPERFAMILY SSF52172 1 120 1.42E-38 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_16390 ae39883579c1adb0d6cfbd3d34e2acfd 243 Gene3D G3DSA:3.30.1150.10 137 239 2.5E-5 T 23-10-2018 CDG62_16390 ae39883579c1adb0d6cfbd3d34e2acfd 243 SUPERFAMILY SSF74653 154 214 1.26E-5 T 23-10-2018 CDG62_16390 ae39883579c1adb0d6cfbd3d34e2acfd 243 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 174 215 1.5E-5 T 23-10-2018 IPR037682 TonB, C-terminal GO:0055085 CDG62_16390 ae39883579c1adb0d6cfbd3d34e2acfd 243 Gene3D G3DSA:3.30.1150.10 27 133 1.9E-6 T 23-10-2018 CDG62_16390 ae39883579c1adb0d6cfbd3d34e2acfd 243 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 58 108 3.0E-7 T 23-10-2018 IPR006260 TonB/TolA, C-terminal CDG62_16390 ae39883579c1adb0d6cfbd3d34e2acfd 243 SUPERFAMILY SSF74653 34 127 2.88E-10 T 23-10-2018 CDG62_11480 317ce40b577391db8c7e58d7f3527ce5 176 SUPERFAMILY SSF50199 39 166 9.68E-30 T 23-10-2018 CDG62_11480 317ce40b577391db8c7e58d7f3527ce5 176 Gene3D G3DSA:2.40.50.90 44 172 2.2E-23 T 23-10-2018 IPR035437 SNase-like, OB-fold superfamily CDG62_11480 317ce40b577391db8c7e58d7f3527ce5 176 ProSitePatterns PS01284 Thermonuclease family signature 2. 103 113 - T 23-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 CDG62_11480 317ce40b577391db8c7e58d7f3527ce5 176 SMART SM00318 43 162 8.6E-22 T 23-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 CDG62_11480 317ce40b577391db8c7e58d7f3527ce5 176 Pfam PF00565 Staphylococcal nuclease homologue 80 161 1.9E-20 T 23-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 CDG62_13350 100588d71947009e95d42834ce2769f9 553 Gene3D G3DSA:3.30.300.30 440 553 8.1E-29 T 23-10-2018 CDG62_13350 100588d71947009e95d42834ce2769f9 553 Pfam PF00501 AMP-binding enzyme 41 444 2.4E-77 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG62_13350 100588d71947009e95d42834ce2769f9 553 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG62_13350 100588d71947009e95d42834ce2769f9 553 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 531 6.5E-23 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG62_13350 100588d71947009e95d42834ce2769f9 553 SUPERFAMILY SSF56801 26 543 1.7E-138 T 23-10-2018 CDG62_13350 100588d71947009e95d42834ce2769f9 553 Gene3D G3DSA:3.40.50.12780 2 438 1.2E-94 T 23-10-2018 CDG62_04785 ca114194fc871801997462d436100d61 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 1.1E-16 T 23-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CDG62_04785 ca114194fc871801997462d436100d61 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.455 T 23-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04785 ca114194fc871801997462d436100d61 58 PIRSF PIRSF002211 1 58 1.2E-24 T 23-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04785 ca114194fc871801997462d436100d61 58 Gene3D G3DSA:3.30.1390.20 1 58 4.1E-23 T 23-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CDG62_04785 ca114194fc871801997462d436100d61 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 23-10-2018 IPR018038 Ribosomal protein L30, conserved site CDG62_04785 ca114194fc871801997462d436100d61 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 3.5E-20 T 23-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04785 ca114194fc871801997462d436100d61 58 SUPERFAMILY SSF55129 1 58 3.53E-20 T 23-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CDG62_03775 1dde39613599fb869c3c8b72fff827e3 454 Pfam PF07690 Major Facilitator Superfamily 15 349 2.7E-37 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_03775 1dde39613599fb869c3c8b72fff827e3 454 SUPERFAMILY SSF103473 6 384 2.22E-52 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_03775 1dde39613599fb869c3c8b72fff827e3 454 Gene3D G3DSA:3.30.70.100 385 448 5.2E-8 T 23-10-2018 CDG62_03775 1dde39613599fb869c3c8b72fff827e3 454 Gene3D G3DSA:1.20.1250.20 1 384 3.1E-65 T 23-10-2018 CDG62_11470 b78a5e5f13cb6b96be5a8f4e20c18348 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 8.8E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_11470 b78a5e5f13cb6b96be5a8f4e20c18348 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 8.8E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_11470 b78a5e5f13cb6b96be5a8f4e20c18348 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 8.8E-6 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_11470 b78a5e5f13cb6b96be5a8f4e20c18348 305 Gene3D G3DSA:3.40.190.10 182 275 1.9E-29 T 23-10-2018 CDG62_11470 b78a5e5f13cb6b96be5a8f4e20c18348 305 SUPERFAMILY SSF46785 16 94 1.77E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_11470 b78a5e5f13cb6b96be5a8f4e20c18348 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 79 3.3E-16 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_11470 b78a5e5f13cb6b96be5a8f4e20c18348 305 Gene3D G3DSA:3.40.190.10 109 298 1.9E-29 T 23-10-2018 CDG62_11470 b78a5e5f13cb6b96be5a8f4e20c18348 305 SUPERFAMILY SSF53850 109 301 1.09E-18 T 23-10-2018 CDG62_11470 b78a5e5f13cb6b96be5a8f4e20c18348 305 Gene3D G3DSA:1.10.10.10 12 100 7.9E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_12845 b118dfa370900a7011279da56994d88c 230 SMART SM00535 25 155 1.0E-47 T 23-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CDG62_12845 b118dfa370900a7011279da56994d88c 230 ProSitePatterns PS00517 Ribonuclease III family signature. 43 51 - T 23-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CDG62_12845 b118dfa370900a7011279da56994d88c 230 Gene3D G3DSA:1.10.1520.10 7 154 1.7E-43 T 23-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 CDG62_12845 b118dfa370900a7011279da56994d88c 230 SUPERFAMILY SSF69065 10 164 7.32E-47 T 23-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 CDG62_12845 b118dfa370900a7011279da56994d88c 230 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 14 227 2.4E-69 T 23-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CDG62_12845 b118dfa370900a7011279da56994d88c 230 SMART SM00358 162 229 7.9E-19 T 23-10-2018 IPR014720 Double-stranded RNA-binding domain CDG62_12845 b118dfa370900a7011279da56994d88c 230 Pfam PF00035 Double-stranded RNA binding motif 162 228 1.8E-12 T 23-10-2018 IPR014720 Double-stranded RNA-binding domain CDG62_12845 b118dfa370900a7011279da56994d88c 230 SUPERFAMILY SSF54768 114 228 4.24E-25 T 23-10-2018 CDG62_12845 b118dfa370900a7011279da56994d88c 230 Hamap MF_00104 Ribonuclease 3 [rnc]. 13 225 28.755 T 23-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CDG62_12845 b118dfa370900a7011279da56994d88c 230 Pfam PF14622 Ribonuclease-III-like 24 132 1.2E-31 T 23-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 CDG62_12845 b118dfa370900a7011279da56994d88c 230 Gene3D G3DSA:3.30.160.20 160 230 6.5E-18 T 23-10-2018 CDG62_09970 e9d9a5be1331880999839a4d8ebcab36 198 SUPERFAMILY SSF101874 23 188 9.29E-54 T 23-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDG62_09970 e9d9a5be1331880999839a4d8ebcab36 198 SMART SM00867 25 189 5.0E-70 T 23-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDG62_09970 e9d9a5be1331880999839a4d8ebcab36 198 Gene3D G3DSA:2.40.128.110 24 189 1.2E-52 T 23-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDG62_09970 e9d9a5be1331880999839a4d8ebcab36 198 Pfam PF04264 YceI-like domain 26 188 1.5E-42 T 23-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDG62_15430 b1ad93dfd50e071778c4921ac308f904 528 Pfam PF00171 Aldehyde dehydrogenase family 21 459 3.6E-47 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG62_15430 b1ad93dfd50e071778c4921ac308f904 528 Gene3D G3DSA:3.40.605.10 44 521 6.9E-193 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG62_15430 b1ad93dfd50e071778c4921ac308f904 528 Gene3D G3DSA:3.40.309.10 267 456 6.9E-193 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG62_15430 b1ad93dfd50e071778c4921ac308f904 528 SUPERFAMILY SSF53720 22 520 6.66E-96 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG62_07325 436be35cfa3230a76d7781b42e99f192 161 Pfam PF04345 Chorismate lyase 1 145 1.6E-18 T 23-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 CDG62_07325 436be35cfa3230a76d7781b42e99f192 161 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 1 149 19.528 T 23-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 CDG62_07325 436be35cfa3230a76d7781b42e99f192 161 SUPERFAMILY SSF64288 3 149 4.79E-34 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDG62_07325 436be35cfa3230a76d7781b42e99f192 161 Gene3D G3DSA:3.40.1410.10 1 149 2.2E-31 T 23-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CDG62_07485 ec32242c1ef8a4f2344bf99018eb10ea 380 Gene3D G3DSA:2.40.30.170 84 371 2.6E-24 T 23-10-2018 CDG62_07485 ec32242c1ef8a4f2344bf99018eb10ea 380 SUPERFAMILY SSF111369 166 348 5.49E-8 T 23-10-2018 CDG62_07485 ec32242c1ef8a4f2344bf99018eb10ea 380 Gene3D G3DSA:1.10.287.470 128 257 2.6E-24 T 23-10-2018 CDG62_07485 ec32242c1ef8a4f2344bf99018eb10ea 380 Gene3D G3DSA:2.40.50.100 94 292 2.6E-24 T 23-10-2018 CDG62_07485 ec32242c1ef8a4f2344bf99018eb10ea 380 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 84 319 9.6E-10 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG62_05400 62ed9abe52d3becb8e1ecca45c77d081 914 Gene3D G3DSA:3.30.460.100 13 253 7.0E-60 T 23-10-2018 CDG62_05400 62ed9abe52d3becb8e1ecca45c77d081 914 Gene3D G3DSA:3.30.460.100 518 769 1.2E-75 T 23-10-2018 CDG62_05400 62ed9abe52d3becb8e1ecca45c77d081 914 Gene3D G3DSA:1.20.120.330 770 907 8.9E-44 T 23-10-2018 CDG62_05400 62ed9abe52d3becb8e1ecca45c77d081 914 Gene3D G3DSA:1.20.120.330 258 408 1.6E-50 T 23-10-2018 CDG62_05400 62ed9abe52d3becb8e1ecca45c77d081 914 SUPERFAMILY SSF81593 773 905 4.24E-30 T 23-10-2018 CDG62_05400 62ed9abe52d3becb8e1ecca45c77d081 914 SUPERFAMILY SSF81301 3 259 2.29E-69 T 23-10-2018 CDG62_05400 62ed9abe52d3becb8e1ecca45c77d081 914 SUPERFAMILY SSF81301 481 773 1.28E-78 T 23-10-2018 CDG62_05400 62ed9abe52d3becb8e1ecca45c77d081 914 Pfam PF08335 GlnD PII-uridylyltransferase 270 409 1.2E-42 T 23-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CDG62_05400 62ed9abe52d3becb8e1ecca45c77d081 914 Pfam PF08335 GlnD PII-uridylyltransferase 785 880 3.2E-9 T 23-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CDG62_05400 62ed9abe52d3becb8e1ecca45c77d081 914 SUPERFAMILY SSF81593 260 409 7.85E-42 T 23-10-2018 CDG62_05400 62ed9abe52d3becb8e1ecca45c77d081 914 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 4 243 1.3E-64 T 23-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CDG62_05400 62ed9abe52d3becb8e1ecca45c77d081 914 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 509 763 1.3E-69 T 23-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CDG62_05400 62ed9abe52d3becb8e1ecca45c77d081 914 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 1 907 18.249 T 23-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 CDG62_05400 62ed9abe52d3becb8e1ecca45c77d081 914 Gene3D G3DSA:1.20.120.1510 409 517 1.4E-16 T 23-10-2018 CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 7.1E-34 T 23-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 SUPERFAMILY SSF52440 1 103 1.15E-35 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 Gene3D G3DSA:3.90.600.10 329 423 4.9E-34 T 23-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 SUPERFAMILY SSF56059 104 319 1.24E-62 T 23-10-2018 CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 23-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 Gene3D G3DSA:3.30.1490.20 122 190 2.6E-27 T 23-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 330 420 3.0E-28 T 23-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 SMART SM01210 329 422 2.9E-49 T 23-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 Gene3D G3DSA:3.40.50.20 2 95 1.2E-35 T 23-10-2018 CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 6.7E-84 T 23-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 Gene3D G3DSA:3.30.470.20 191 328 4.3E-56 T 23-10-2018 CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 SMART SM01209 103 296 1.1E-135 T 23-10-2018 CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 SUPERFAMILY SSF51246 328 423 4.29E-31 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 42.883 T 23-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG62_08595 c98d9594e2d59851e7f8202aca4158ee 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 2.6E-174 T 23-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CDG62_08000 d93e7388035853a614744b0bb1db3c70 181 Pfam PF00857 Isochorismatase family 4 176 1.6E-39 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 CDG62_08000 d93e7388035853a614744b0bb1db3c70 181 Gene3D G3DSA:3.40.50.850 1 181 1.0E-48 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_08000 d93e7388035853a614744b0bb1db3c70 181 SUPERFAMILY SSF52499 2 180 1.44E-49 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_02020 2a395962ef11d21e821badf70f75577c 252 SUPERFAMILY SSF140931 40 185 1.23E-21 T 23-10-2018 IPR036597 Fido-like domain superfamily CDG62_02020 2a395962ef11d21e821badf70f75577c 252 Pfam PF02661 Fic/DOC family 53 159 2.4E-13 T 23-10-2018 IPR003812 Fido domain CDG62_02020 2a395962ef11d21e821badf70f75577c 252 Gene3D G3DSA:1.10.3290.10 5 244 5.3E-51 T 23-10-2018 IPR036597 Fido-like domain superfamily CDG62_09815 338763c8956b470c11ff9b4902a07e7e 173 Gene3D G3DSA:2.70.70.10 28 172 5.8E-43 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG62_09815 338763c8956b470c11ff9b4902a07e7e 173 SUPERFAMILY SSF51261 53 167 6.28E-30 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG62_09815 338763c8956b470c11ff9b4902a07e7e 173 Pfam PF01551 Peptidase family M23 74 167 2.1E-23 T 23-10-2018 IPR016047 Peptidase M23 CDG62_08785 dc11c46e6ee5296325ce109156c02b4e 319 Gene3D G3DSA:3.40.190.10 105 204 6.5E-72 T 23-10-2018 CDG62_08785 dc11c46e6ee5296325ce109156c02b4e 319 Gene3D G3DSA:1.10.8.450 235 267 6.5E-72 T 23-10-2018 CDG62_08785 dc11c46e6ee5296325ce109156c02b4e 319 Gene3D G3DSA:3.40.190.10 31 299 6.5E-72 T 23-10-2018 CDG62_08785 dc11c46e6ee5296325ce109156c02b4e 319 SUPERFAMILY SSF53850 40 253 5.69E-48 T 23-10-2018 CDG62_08785 dc11c46e6ee5296325ce109156c02b4e 319 SMART SM00062 27 240 1.6E-5 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG62_08785 dc11c46e6ee5296325ce109156c02b4e 319 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 28 308 2.5E-76 T 23-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 CDG62_08785 dc11c46e6ee5296325ce109156c02b4e 319 Pfam PF09084 NMT1/THI5 like 59 243 9.1E-27 T 23-10-2018 IPR015168 SsuA/THI5-like CDG62_04690 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-16 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04690 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-16 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04690 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-16 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04690 30754b50b4a1c114facd78fddb6cd26e 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.255 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04690 30754b50b4a1c114facd78fddb6cd26e 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 6.9E-36 T 23-10-2018 IPR027486 Ribosomal protein S10 domain CDG62_04690 30754b50b4a1c114facd78fddb6cd26e 103 SMART SM01403 7 101 4.5E-55 T 23-10-2018 IPR027486 Ribosomal protein S10 domain CDG62_04690 30754b50b4a1c114facd78fddb6cd26e 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.9E-45 T 23-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04690 30754b50b4a1c114facd78fddb6cd26e 103 SUPERFAMILY SSF54999 5 101 1.31E-36 T 23-10-2018 IPR036838 Ribosomal protein S10 domain superfamily CDG62_04690 30754b50b4a1c114facd78fddb6cd26e 103 Gene3D G3DSA:3.30.70.600 1 103 7.2E-37 T 23-10-2018 IPR036838 Ribosomal protein S10 domain superfamily CDG62_04690 30754b50b4a1c114facd78fddb6cd26e 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 23-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04615 98e0238b4138cde6c6b874ebe753b4cd 681 Gene3D G3DSA:3.40.50.300 198 438 7.0E-82 T 23-10-2018 CDG62_04615 98e0238b4138cde6c6b874ebe753b4cd 681 SUPERFAMILY SSF50249 4 166 1.22E-30 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_04615 98e0238b4138cde6c6b874ebe753b4cd 681 Gene3D G3DSA:2.40.50.140 40 133 9.9E-8 T 23-10-2018 CDG62_04615 98e0238b4138cde6c6b874ebe753b4cd 681 Gene3D G3DSA:3.40.50.300 446 618 8.1E-54 T 23-10-2018 CDG62_04615 98e0238b4138cde6c6b874ebe753b4cd 681 SUPERFAMILY SSF52540 204 442 1.31E-58 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_04615 98e0238b4138cde6c6b874ebe753b4cd 681 SMART SM00490 493 577 6.9E-20 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_04615 98e0238b4138cde6c6b874ebe753b4cd 681 SMART SM00487 255 448 7.2E-30 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG62_04615 98e0238b4138cde6c6b874ebe753b4cd 681 Pfam PF17191 RecG wedge domain 6 163 5.1E-19 T 23-10-2018 IPR033454 RecG, wedge domain CDG62_04615 98e0238b4138cde6c6b874ebe753b4cd 681 SUPERFAMILY SSF52540 282 639 2.18E-42 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_04615 98e0238b4138cde6c6b874ebe753b4cd 681 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 22 650 1.1E-226 T 23-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CDG62_04615 98e0238b4138cde6c6b874ebe753b4cd 681 Pfam PF00270 DEAD/DEAH box helicase 283 422 7.6E-18 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDG62_04615 98e0238b4138cde6c6b874ebe753b4cd 681 Pfam PF00271 Helicase conserved C-terminal domain 466 576 3.1E-17 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_15035 01358f7620d79aa67fa7956fd957de3c 828 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 38 826 2.3E-178 T 23-10-2018 IPR010104 Bacterial TonB-dependent receptor CDG62_15035 01358f7620d79aa67fa7956fd957de3c 828 SUPERFAMILY SSF56935 36 826 9.16E-93 T 23-10-2018 CDG62_15035 01358f7620d79aa67fa7956fd957de3c 828 Gene3D G3DSA:2.170.130.10 41 165 1.6E-12 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_15035 01358f7620d79aa67fa7956fd957de3c 828 Gene3D G3DSA:2.40.170.20 183 827 2.5E-51 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_15035 01358f7620d79aa67fa7956fd957de3c 828 Pfam PF00593 TonB dependent receptor 377 826 2.0E-36 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_15035 01358f7620d79aa67fa7956fd957de3c 828 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 162 1.3E-13 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_16780 bfade9dd2e341107ba71d2b21594bebb 713 Gene3D G3DSA:3.40.50.10950 398 707 5.5E-130 T 23-10-2018 CDG62_16780 bfade9dd2e341107ba71d2b21594bebb 713 SUPERFAMILY SSF52540 1 239 5.42E-19 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_16780 bfade9dd2e341107ba71d2b21594bebb 713 Pfam PF01515 Phosphate acetyl/butaryl transferase 390 704 3.0E-117 T 23-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CDG62_16780 bfade9dd2e341107ba71d2b21594bebb 713 Pfam PF13500 AAA domain 2 227 5.1E-25 T 23-10-2018 CDG62_16780 bfade9dd2e341107ba71d2b21594bebb 713 SUPERFAMILY SSF75138 229 353 1.65E-18 T 23-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CDG62_16780 bfade9dd2e341107ba71d2b21594bebb 713 Pfam PF07085 DRTGG domain 233 344 9.9E-22 T 23-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CDG62_16780 bfade9dd2e341107ba71d2b21594bebb 713 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 405 704 5.3E-128 T 23-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CDG62_16780 bfade9dd2e341107ba71d2b21594bebb 713 Gene3D G3DSA:3.40.50.300 1 186 1.5E-13 T 23-10-2018 CDG62_16780 bfade9dd2e341107ba71d2b21594bebb 713 SUPERFAMILY SSF53659 392 708 7.4E-89 T 23-10-2018 CDG62_16780 bfade9dd2e341107ba71d2b21594bebb 713 PIRSF PIRSF006107 1 712 0.0 T 23-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CDG62_16780 bfade9dd2e341107ba71d2b21594bebb 713 Gene3D G3DSA:3.40.1390.20 223 366 3.9E-15 T 23-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CDG62_16780 bfade9dd2e341107ba71d2b21594bebb 713 Gene3D G3DSA:3.40.50.10750 527 680 5.5E-130 T 23-10-2018 CDG62_18635 be27d2a3da3104f9bc12326d1ead739f 224 Pfam PF13391 HNH endonuclease 125 176 9.6E-8 T 23-10-2018 IPR003615 HNH nuclease CDG62_03745 a6e83544d958596f579ce3e77394842f 569 Gene3D G3DSA:3.30.70.270 397 569 1.1E-48 T 23-10-2018 CDG62_03745 a6e83544d958596f579ce3e77394842f 569 Pfam PF00990 Diguanylate cyclase, GGDEF domain 411 566 6.2E-42 T 23-10-2018 IPR000160 GGDEF domain CDG62_03745 a6e83544d958596f579ce3e77394842f 569 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 407 567 1.4E-45 T 23-10-2018 IPR000160 GGDEF domain CDG62_03745 a6e83544d958596f579ce3e77394842f 569 SUPERFAMILY SSF55073 416 568 1.57E-41 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_03745 a6e83544d958596f579ce3e77394842f 569 SMART SM00267 400 569 8.4E-54 T 23-10-2018 IPR000160 GGDEF domain CDG62_16010 a740e607d64450a1cf680e3f96e3ed67 247 Pfam PF07070 SpoOM protein 2 216 1.3E-63 T 23-10-2018 IPR009776 Sporulation stage 0, protein M CDG62_16010 a740e607d64450a1cf680e3f96e3ed67 247 Gene3D G3DSA:2.60.40.640 11 142 3.9E-5 T 23-10-2018 IPR014752 Arrestin, C-terminal CDG62_00665 3a0481eb5637ab71a3d42ed32f9a55d1 281 Pfam PF14355 Abortive infection C-terminus 193 266 2.8E-22 T 23-10-2018 IPR026001 Abortive infection protein-like, C-terminal domain CDG62_03945 b3f72d664d3a86725988a7381e44be46 333 SMART SM00342 246 328 6.2E-18 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_03945 b3f72d664d3a86725988a7381e44be46 333 Pfam PF12833 Helix-turn-helix domain 252 328 5.4E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_03945 b3f72d664d3a86725988a7381e44be46 333 Gene3D G3DSA:1.10.10.60 226 332 1.5E-21 T 23-10-2018 CDG62_03945 b3f72d664d3a86725988a7381e44be46 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 41 201 3.2E-31 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG62_03945 b3f72d664d3a86725988a7381e44be46 333 SUPERFAMILY SSF46689 282 331 2.37E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_06310 56a8adb32c814618c9bc56adba677f52 602 Gene3D G3DSA:3.40.190.10 225 340 2.7E-17 T 23-10-2018 CDG62_06310 56a8adb32c814618c9bc56adba677f52 602 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 517 2.6E-65 T 23-10-2018 IPR000914 Solute-binding protein family 5 domain CDG62_06310 56a8adb32c814618c9bc56adba677f52 602 SUPERFAMILY SSF53850 30 588 4.52E-86 T 23-10-2018 CDG62_06310 56a8adb32c814618c9bc56adba677f52 602 PIRSF PIRSF002741 1 598 1.6E-53 T 23-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CDG62_06310 56a8adb32c814618c9bc56adba677f52 602 Gene3D G3DSA:3.90.76.10 49 223 4.1E-33 T 23-10-2018 CDG62_06310 56a8adb32c814618c9bc56adba677f52 602 Gene3D G3DSA:3.10.105.10 342 567 3.1E-33 T 23-10-2018 CDG62_03185 a3e78f9560f0fb832ebcaacac97f19a0 344 Gene3D G3DSA:1.10.1670.10 9 209 1.3E-81 T 23-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CDG62_03185 a3e78f9560f0fb832ebcaacac97f19a0 344 SUPERFAMILY SSF55811 218 342 7.92E-22 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG62_03185 a3e78f9560f0fb832ebcaacac97f19a0 344 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 158 3.3E-16 T 23-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CDG62_03185 a3e78f9560f0fb832ebcaacac97f19a0 344 SMART SM00478 39 188 3.0E-34 T 23-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CDG62_03185 a3e78f9560f0fb832ebcaacac97f19a0 344 Pfam PF14815 NUDIX domain 233 340 1.0E-21 T 23-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CDG62_03185 a3e78f9560f0fb832ebcaacac97f19a0 344 Gene3D G3DSA:1.10.340.30 21 130 1.3E-81 T 23-10-2018 CDG62_03185 a3e78f9560f0fb832ebcaacac97f19a0 344 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 272 3.9E-106 T 23-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CDG62_03185 a3e78f9560f0fb832ebcaacac97f19a0 344 ProSitePatterns PS01155 Endonuclease III family signature. 100 127 - T 23-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CDG62_03185 a3e78f9560f0fb832ebcaacac97f19a0 344 SUPERFAMILY SSF48150 6 223 1.07E-70 T 23-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CDG62_03185 a3e78f9560f0fb832ebcaacac97f19a0 344 Gene3D G3DSA:3.90.79.10 223 344 1.9E-18 T 23-10-2018 CDG62_03185 a3e78f9560f0fb832ebcaacac97f19a0 344 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 23-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CDG62_03185 a3e78f9560f0fb832ebcaacac97f19a0 344 Pfam PF00633 Helix-hairpin-helix motif 99 125 6.1E-7 T 23-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CDG62_17425 9cf87fa9d3d64ee54d4cd819f8026cad 341 Pfam PF13271 Domain of unknown function (DUF4062) 7 85 3.7E-11 T 23-10-2018 IPR025139 Domain of unknown function DUF4062 CDG62_07295 dbe93eb1e033f28fc7a2cb759340db33 128 Pfam PF00196 Bacterial regulatory proteins, luxR family 66 120 5.9E-17 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_07295 dbe93eb1e033f28fc7a2cb759340db33 128 Gene3D G3DSA:1.10.10.10 3 128 1.7E-20 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_07295 dbe93eb1e033f28fc7a2cb759340db33 128 SMART SM00421 64 121 4.7E-20 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_07295 dbe93eb1e033f28fc7a2cb759340db33 128 SUPERFAMILY SSF46894 61 127 3.4E-18 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG62_07295 dbe93eb1e033f28fc7a2cb759340db33 128 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 97 109 2.1E-10 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_07295 dbe93eb1e033f28fc7a2cb759340db33 128 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 67 81 2.1E-10 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_07295 dbe93eb1e033f28fc7a2cb759340db33 128 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 81 97 2.1E-10 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_14510 4a282a47df4bc98085a8be7c465f57f8 375 Gene3D G3DSA:1.10.287.470 112 184 3.9E-52 T 23-10-2018 CDG62_14510 4a282a47df4bc98085a8be7c465f57f8 375 Gene3D G3DSA:2.40.420.20 300 357 3.9E-52 T 23-10-2018 CDG62_14510 4a282a47df4bc98085a8be7c465f57f8 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 79 273 9.9E-20 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG62_14510 4a282a47df4bc98085a8be7c465f57f8 375 Gene3D G3DSA:2.40.30.170 64 299 3.9E-52 T 23-10-2018 CDG62_14510 4a282a47df4bc98085a8be7c465f57f8 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 62 357 3.0E-58 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG62_14510 4a282a47df4bc98085a8be7c465f57f8 375 Gene3D G3DSA:2.40.50.100 78 224 3.9E-52 T 23-10-2018 CDG62_14510 4a282a47df4bc98085a8be7c465f57f8 375 SUPERFAMILY SSF111369 68 234 3.27E-21 T 23-10-2018 CDG62_04090 a9aa2523bea4df7bbcb42ca5ff832e05 425 Gene3D G3DSA:3.40.640.10 4 287 1.2E-103 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_04090 a9aa2523bea4df7bbcb42ca5ff832e05 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 422 8.0E-145 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG62_04090 a9aa2523bea4df7bbcb42ca5ff832e05 425 SUPERFAMILY SSF53383 4 423 1.3E-130 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_04090 a9aa2523bea4df7bbcb42ca5ff832e05 425 Gene3D G3DSA:3.90.1150.10 291 425 2.4E-53 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_04090 a9aa2523bea4df7bbcb42ca5ff832e05 425 PIRSF PIRSF001434 1 425 1.1E-135 T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG62_04090 a9aa2523bea4df7bbcb42ca5ff832e05 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 423 1.8E-201 T 23-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 CDG62_04090 a9aa2523bea4df7bbcb42ca5ff832e05 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 23-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CDG62_14705 2d0cbe234410aadaed5b0bdffa6c97d8 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 99 202 2.0E-9 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_14705 2d0cbe234410aadaed5b0bdffa6c97d8 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 202 1.3E-27 T 23-10-2018 CDG62_14705 2d0cbe234410aadaed5b0bdffa6c97d8 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 95 197 7.8E-13 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_14705 2d0cbe234410aadaed5b0bdffa6c97d8 230 Gene3D G3DSA:1.20.120.710 16 102 3.3E-38 T 23-10-2018 CDG62_14705 2d0cbe234410aadaed5b0bdffa6c97d8 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 115 128 1.3E-11 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_14705 2d0cbe234410aadaed5b0bdffa6c97d8 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 192 205 1.3E-11 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_14705 2d0cbe234410aadaed5b0bdffa6c97d8 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 162 1.3E-11 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_14705 2d0cbe234410aadaed5b0bdffa6c97d8 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.3E-11 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_14705 2d0cbe234410aadaed5b0bdffa6c97d8 230 Gene3D G3DSA:3.40.50.1000 4 218 3.3E-38 T 23-10-2018 IPR023214 HAD superfamily CDG62_14705 2d0cbe234410aadaed5b0bdffa6c97d8 230 SUPERFAMILY SSF56784 3 225 3.47E-39 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_11945 5673e777d8d1d0f56c8f43ce54cd4ab4 389 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 388 4.3E-200 T 23-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 CDG62_11945 5673e777d8d1d0f56c8f43ce54cd4ab4 389 SUPERFAMILY SSF53383 2 389 1.79E-92 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_11945 5673e777d8d1d0f56c8f43ce54cd4ab4 389 Gene3D G3DSA:3.40.640.10 42 287 2.0E-123 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_11945 5673e777d8d1d0f56c8f43ce54cd4ab4 389 Pfam PF00155 Aminotransferase class I and II 30 385 4.9E-51 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG62_11945 5673e777d8d1d0f56c8f43ce54cd4ab4 389 Gene3D G3DSA:3.90.1150.10 13 379 2.0E-123 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_15320 3ceb9bf1587f36ab2ac5f3e2ca3a78b8 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.0E-22 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_15320 3ceb9bf1587f36ab2ac5f3e2ca3a78b8 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.9E-10 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_15320 3ceb9bf1587f36ab2ac5f3e2ca3a78b8 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.9E-10 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_15320 3ceb9bf1587f36ab2ac5f3e2ca3a78b8 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.9E-10 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_15320 3ceb9bf1587f36ab2ac5f3e2ca3a78b8 303 Gene3D G3DSA:3.40.190.10 91 280 5.4E-51 T 23-10-2018 CDG62_15320 3ceb9bf1587f36ab2ac5f3e2ca3a78b8 303 Gene3D G3DSA:3.40.190.10 164 268 5.4E-51 T 23-10-2018 CDG62_15320 3ceb9bf1587f36ab2ac5f3e2ca3a78b8 303 SUPERFAMILY SSF46785 1 85 5.17E-23 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_15320 3ceb9bf1587f36ab2ac5f3e2ca3a78b8 303 Pfam PF03466 LysR substrate binding domain 89 283 5.8E-33 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_15320 3ceb9bf1587f36ab2ac5f3e2ca3a78b8 303 Gene3D G3DSA:1.10.10.10 1 90 1.2E-28 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15320 3ceb9bf1587f36ab2ac5f3e2ca3a78b8 303 SUPERFAMILY SSF53850 88 295 5.31E-31 T 23-10-2018 CDG62_03480 b6ad1dc394abd6b4c07bdd8d9a36e866 116 Pfam PF03960 ArsC family 5 113 2.7E-16 T 23-10-2018 IPR006660 Arsenate reductase-like CDG62_03480 b6ad1dc394abd6b4c07bdd8d9a36e866 116 Gene3D G3DSA:3.40.30.10 1 115 1.1E-37 T 23-10-2018 CDG62_03480 b6ad1dc394abd6b4c07bdd8d9a36e866 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 115 5.3E-26 T 23-10-2018 IPR006504 Transcriptional regulator Spx/MgsR CDG62_03480 b6ad1dc394abd6b4c07bdd8d9a36e866 116 SUPERFAMILY SSF52833 1 114 5.6E-30 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_16330 5ca44beb6283b3470da4df602a5eb42c 108 PIRSF PIRSF000077 2 108 4.3E-39 T 23-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CDG62_16330 5ca44beb6283b3470da4df602a5eb42c 108 SUPERFAMILY SSF52833 3 107 2.05E-36 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_16330 5ca44beb6283b3470da4df602a5eb42c 108 Gene3D G3DSA:3.40.30.10 2 108 4.1E-34 T 23-10-2018 CDG62_16330 5ca44beb6283b3470da4df602a5eb42c 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 5.3E-36 T 23-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CDG62_16330 5ca44beb6283b3470da4df602a5eb42c 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 23-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CDG62_16330 5ca44beb6283b3470da4df602a5eb42c 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-7 T 23-10-2018 CDG62_16330 5ca44beb6283b3470da4df602a5eb42c 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-7 T 23-10-2018 CDG62_16330 5ca44beb6283b3470da4df602a5eb42c 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-7 T 23-10-2018 CDG62_16330 5ca44beb6283b3470da4df602a5eb42c 108 Pfam PF00085 Thioredoxin 5 106 3.7E-34 T 23-10-2018 IPR013766 Thioredoxin domain GO:0045454 CDG62_18330 9c5793927c263da0dcae949a96fbb5b7 206 SUPERFAMILY SSF102405 19 196 3.51E-59 T 23-10-2018 CDG62_18330 9c5793927c263da0dcae949a96fbb5b7 206 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 22 197 9.4E-58 T 23-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CDG62_18330 9c5793927c263da0dcae949a96fbb5b7 206 Gene3D G3DSA:3.40.50.450 22 204 3.6E-70 T 23-10-2018 CDG62_18330 9c5793927c263da0dcae949a96fbb5b7 206 Pfam PF03641 Possible lysine decarboxylase 65 194 3.8E-41 T 23-10-2018 IPR031100 LOG family CDG62_03310 3b2e1b8cdf5026b8e3674e7f4ccbf24b 282 Gene3D G3DSA:3.40.250.10 150 275 9.1E-28 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG62_03310 3b2e1b8cdf5026b8e3674e7f4ccbf24b 282 SUPERFAMILY SSF52821 152 280 1.83E-29 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG62_03310 3b2e1b8cdf5026b8e3674e7f4ccbf24b 282 Pfam PF00581 Rhodanese-like domain 157 268 3.1E-16 T 23-10-2018 IPR001763 Rhodanese-like domain CDG62_03310 3b2e1b8cdf5026b8e3674e7f4ccbf24b 282 Pfam PF00581 Rhodanese-like domain 15 123 1.9E-14 T 23-10-2018 IPR001763 Rhodanese-like domain CDG62_03310 3b2e1b8cdf5026b8e3674e7f4ccbf24b 282 SMART SM00450 154 273 5.8E-17 T 23-10-2018 IPR001763 Rhodanese-like domain CDG62_03310 3b2e1b8cdf5026b8e3674e7f4ccbf24b 282 SMART SM00450 12 127 2.3E-14 T 23-10-2018 IPR001763 Rhodanese-like domain CDG62_03310 3b2e1b8cdf5026b8e3674e7f4ccbf24b 282 SUPERFAMILY SSF52821 9 144 1.27E-30 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG62_03310 3b2e1b8cdf5026b8e3674e7f4ccbf24b 282 Gene3D G3DSA:3.40.250.10 7 144 9.6E-32 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG62_14370 b3b718b5b1f3a67c8d2a5cf46e1a7968 399 Gene3D G3DSA:1.20.1720.10 14 393 4.7E-99 T 23-10-2018 CDG62_14370 b3b718b5b1f3a67c8d2a5cf46e1a7968 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 12 390 6.3E-83 T 23-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 CDG62_14370 b3b718b5b1f3a67c8d2a5cf46e1a7968 399 Pfam PF07690 Major Facilitator Superfamily 20 356 1.8E-38 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_14370 b3b718b5b1f3a67c8d2a5cf46e1a7968 399 SUPERFAMILY SSF103473 9 392 1.57E-54 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_03335 c629b4ecf03d03b31d1e1b8be685f0ce 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.4E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03335 c629b4ecf03d03b31d1e1b8be685f0ce 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.4E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03335 c629b4ecf03d03b31d1e1b8be685f0ce 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.4E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03335 c629b4ecf03d03b31d1e1b8be685f0ce 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.4E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03335 c629b4ecf03d03b31d1e1b8be685f0ce 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.4E-23 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03335 c629b4ecf03d03b31d1e1b8be685f0ce 279 Gene3D G3DSA:3.40.50.720 1 278 1.5E-68 T 23-10-2018 CDG62_03335 c629b4ecf03d03b31d1e1b8be685f0ce 279 Pfam PF00106 short chain dehydrogenase 7 197 1.0E-46 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03335 c629b4ecf03d03b31d1e1b8be685f0ce 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.7E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03335 c629b4ecf03d03b31d1e1b8be685f0ce 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.7E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03335 c629b4ecf03d03b31d1e1b8be685f0ce 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.7E-11 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03335 c629b4ecf03d03b31d1e1b8be685f0ce 279 SUPERFAMILY SSF51735 1 271 2.04E-63 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_03335 c629b4ecf03d03b31d1e1b8be685f0ce 279 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG62_12670 d8451f398c1a073fef8e900d049e04a3 341 Pfam PF12849 PBP superfamily domain 19 305 5.5E-44 T 23-10-2018 IPR024370 PBP domain CDG62_12670 d8451f398c1a073fef8e900d049e04a3 341 Gene3D G3DSA:3.40.190.10 27 306 7.4E-54 T 23-10-2018 CDG62_12670 d8451f398c1a073fef8e900d049e04a3 341 Gene3D G3DSA:3.40.190.10 113 279 7.4E-54 T 23-10-2018 CDG62_12670 d8451f398c1a073fef8e900d049e04a3 341 SUPERFAMILY SSF53850 18 335 2.39E-64 T 23-10-2018 CDG62_06805 904cffde23073e3381ad3967a7b05bda 276 Pfam PF08544 GHMP kinases C terminal 204 254 3.1E-6 T 23-10-2018 IPR013750 GHMP kinase, C-terminal domain CDG62_06805 904cffde23073e3381ad3967a7b05bda 276 Gene3D G3DSA:3.30.230.10 1 155 5.2E-57 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG62_06805 904cffde23073e3381ad3967a7b05bda 276 Pfam PF00288 GHMP kinases N terminal domain 84 140 5.5E-11 T 23-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CDG62_06805 904cffde23073e3381ad3967a7b05bda 276 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 2 262 30.735 T 23-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CDG62_06805 904cffde23073e3381ad3967a7b05bda 276 PIRSF PIRSF010376 1 271 2.4E-77 T 23-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CDG62_06805 904cffde23073e3381ad3967a7b05bda 276 Gene3D G3DSA:3.30.70.890 158 274 8.1E-19 T 23-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CDG62_06805 904cffde23073e3381ad3967a7b05bda 276 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 258 6.3E-76 T 23-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CDG62_06805 904cffde23073e3381ad3967a7b05bda 276 SUPERFAMILY SSF54211 1 155 1.29E-44 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_06805 904cffde23073e3381ad3967a7b05bda 276 SUPERFAMILY SSF55060 156 270 1.82E-21 T 23-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily CDG62_10170 020f7d30181af78f6b13510149b7c243 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.8E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_10170 020f7d30181af78f6b13510149b7c243 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.8E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_10170 020f7d30181af78f6b13510149b7c243 204 SUPERFAMILY SSF46689 3 74 2.49E-14 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_10170 020f7d30181af78f6b13510149b7c243 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.6E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_10170 020f7d30181af78f6b13510149b7c243 204 Gene3D G3DSA:1.10.357.10 1 191 6.2E-18 T 23-10-2018 CDG62_18290 887381f86f21f7ce4d22a6d4dca2c57e 134 Gene3D G3DSA:1.20.120.550 3 133 5.2E-18 T 23-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily CDG62_18290 887381f86f21f7ce4d22a6d4dca2c57e 134 Pfam PF01124 MAPEG family 8 129 8.2E-25 T 23-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CDG62_18290 887381f86f21f7ce4d22a6d4dca2c57e 134 SUPERFAMILY SSF161084 7 129 1.18E-29 T 23-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily CDG62_07235 dcb228276cfc4713070ac88db38c2abb 356 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 352 49.235 T 23-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDG62_07235 dcb228276cfc4713070ac88db38c2abb 356 Gene3D G3DSA:3.20.20.210 1 356 3.7E-163 T 23-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CDG62_07235 dcb228276cfc4713070ac88db38c2abb 356 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 351 1.4E-139 T 23-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDG62_07235 dcb228276cfc4713070ac88db38c2abb 356 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 23-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDG62_07235 dcb228276cfc4713070ac88db38c2abb 356 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 23-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDG62_07235 dcb228276cfc4713070ac88db38c2abb 356 SUPERFAMILY SSF51726 1 354 3.92E-119 T 23-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CDG62_07235 dcb228276cfc4713070ac88db38c2abb 356 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 350 7.7E-136 T 23-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CDG62_07625 95c7bb04f4b6a93e82c0df2ec5918cc4 205 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_07625 95c7bb04f4b6a93e82c0df2ec5918cc4 205 Pfam PF00005 ABC transporter 23 159 1.7E-28 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_07625 95c7bb04f4b6a93e82c0df2ec5918cc4 205 SUPERFAMILY SSF52540 8 204 1.9E-56 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_07625 95c7bb04f4b6a93e82c0df2ec5918cc4 205 Gene3D G3DSA:3.40.50.300 3 205 8.4E-49 T 23-10-2018 CDG62_07625 95c7bb04f4b6a93e82c0df2ec5918cc4 205 SMART SM00382 22 198 1.5E-7 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_04095 4b7903edd65a6fe2bd592fd7eb4d7aa4 553 Pfam PF12848 ABC transporter 230 304 5.8E-11 T 23-10-2018 IPR032781 ABC-transporter extension domain CDG62_04095 4b7903edd65a6fe2bd592fd7eb4d7aa4 553 Gene3D G3DSA:3.40.50.300 287 551 1.8E-73 T 23-10-2018 CDG62_04095 4b7903edd65a6fe2bd592fd7eb4d7aa4 553 Gene3D G3DSA:3.40.50.300 1 286 7.2E-83 T 23-10-2018 CDG62_04095 4b7903edd65a6fe2bd592fd7eb4d7aa4 553 SMART SM00382 31 242 7.0E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_04095 4b7903edd65a6fe2bd592fd7eb4d7aa4 553 SMART SM00382 348 521 1.7E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_04095 4b7903edd65a6fe2bd592fd7eb4d7aa4 553 SUPERFAMILY SSF52540 302 532 2.71E-46 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_04095 4b7903edd65a6fe2bd592fd7eb4d7aa4 553 Pfam PF00005 ABC transporter 22 191 1.6E-27 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_04095 4b7903edd65a6fe2bd592fd7eb4d7aa4 553 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_04095 4b7903edd65a6fe2bd592fd7eb4d7aa4 553 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 551 8.3E-285 T 23-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 CDG62_04095 4b7903edd65a6fe2bd592fd7eb4d7aa4 553 Pfam PF00005 ABC transporter 340 473 2.7E-23 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_04095 4b7903edd65a6fe2bd592fd7eb4d7aa4 553 SUPERFAMILY SSF52540 9 244 9.77E-49 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_04095 4b7903edd65a6fe2bd592fd7eb4d7aa4 553 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_15060 f31cbf620f51a5f460f0531f6276b7b2 538 SUPERFAMILY SSF53649 32 538 1.01E-120 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG62_15060 f31cbf620f51a5f460f0531f6276b7b2 538 PRINTS PR00113 Alkaline phosphatase signature 301 330 1.2E-37 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG62_15060 f31cbf620f51a5f460f0531f6276b7b2 538 PRINTS PR00113 Alkaline phosphatase signature 162 182 1.2E-37 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG62_15060 f31cbf620f51a5f460f0531f6276b7b2 538 PRINTS PR00113 Alkaline phosphatase signature 53 73 1.2E-37 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG62_15060 f31cbf620f51a5f460f0531f6276b7b2 538 PRINTS PR00113 Alkaline phosphatase signature 221 231 1.2E-37 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG62_15060 f31cbf620f51a5f460f0531f6276b7b2 538 SMART SM00098 54 538 5.0E-72 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG62_15060 f31cbf620f51a5f460f0531f6276b7b2 538 Pfam PF00245 Alkaline phosphatase 55 537 6.8E-98 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG62_12675 379b14a00c95a9c03c3a5899a7c323c3 313 Pfam PF13557 Putative MetA-pathway of phenol degradation 76 307 9.8E-35 T 23-10-2018 IPR025737 MetA-pathway of phenol degradation, putative CDG62_02630 d03f2b83b7be7acf19c3f44893b4ccb4 306 SUPERFAMILY SSF49482 15 291 1.96E-83 T 23-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CDG62_02630 d03f2b83b7be7acf19c3f44893b4ccb4 306 Gene3D G3DSA:2.60.130.10 1 306 1.1E-119 T 23-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CDG62_02630 d03f2b83b7be7acf19c3f44893b4ccb4 306 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 2 287 2.8E-145 T 23-10-2018 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1 CDG62_02630 d03f2b83b7be7acf19c3f44893b4ccb4 306 Pfam PF04444 Catechol dioxygenase N terminus 23 91 2.1E-22 T 23-10-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 CDG62_02630 d03f2b83b7be7acf19c3f44893b4ccb4 306 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 133 161 - T 23-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CDG62_02630 d03f2b83b7be7acf19c3f44893b4ccb4 306 Pfam PF00775 Dioxygenase 101 287 4.3E-59 T 23-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CDG62_13505 15d5d5c479482fe3d0db809158dc64a7 414 Gene3D G3DSA:3.20.20.70 1 358 2.5E-113 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_13505 15d5d5c479482fe3d0db809158dc64a7 414 SUPERFAMILY SSF51395 1 346 1.39E-100 T 23-10-2018 CDG62_13505 15d5d5c479482fe3d0db809158dc64a7 414 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 341 9.5E-54 T 23-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CDG62_03430 4774b4001a2a4dabfcd026048ee5d4fd 243 SUPERFAMILY SSF111364 25 243 1.31E-61 T 23-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 CDG62_03430 4774b4001a2a4dabfcd026048ee5d4fd 243 Gene3D G3DSA:2.40.230.20 20 239 4.4E-21 T 23-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 CDG62_03430 4774b4001a2a4dabfcd026048ee5d4fd 243 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 33 228 8.7E-12 T 23-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CDG62_04780 63a788477cfddc444c1649c9d00ede5c 165 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 161 3.9E-64 T 23-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDG62_04780 63a788477cfddc444c1649c9d00ede5c 165 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 23-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site CDG62_04780 63a788477cfddc444c1649c9d00ede5c 165 SUPERFAMILY SSF54211 78 157 5.31E-26 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_04780 63a788477cfddc444c1649c9d00ede5c 165 Gene3D G3DSA:3.30.230.10 73 165 1.9E-35 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG62_04780 63a788477cfddc444c1649c9d00ede5c 165 SUPERFAMILY SSF54768 7 75 9.1E-23 T 23-10-2018 CDG62_04780 63a788477cfddc444c1649c9d00ede5c 165 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 73 2.6E-27 T 23-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CDG62_04780 63a788477cfddc444c1649c9d00ede5c 165 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 162 33.908 T 23-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CDG62_04780 63a788477cfddc444c1649c9d00ede5c 165 Gene3D G3DSA:3.30.160.20 1 72 4.6E-29 T 23-10-2018 CDG62_04780 63a788477cfddc444c1649c9d00ede5c 165 Pfam PF03719 Ribosomal protein S5, C-terminal domain 86 156 9.2E-29 T 23-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 ProSitePatterns PS00755 Protein secY signature 1. 81 100 - T 23-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 Hamap MF_01465 Protein translocase subunit SecY [secY]. 15 439 28.754 T 23-10-2018 IPR026593 Protein translocase subunit SecY CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 28 46 1.0E-92 T 23-10-2018 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 273 292 1.0E-92 T 23-10-2018 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 181 204 1.0E-92 T 23-10-2018 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 376 394 1.0E-92 T 23-10-2018 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 121 144 1.0E-92 T 23-10-2018 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 80 100 1.0E-92 T 23-10-2018 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 155 180 1.0E-92 T 23-10-2018 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 321 343 1.0E-92 T 23-10-2018 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 408 426 1.0E-92 T 23-10-2018 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 PIRSF PIRSF004557 9 445 3.1E-123 T 23-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 26 435 3.2E-126 T 23-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 SUPERFAMILY SSF103491 9 430 5.23E-128 T 23-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 Gene3D G3DSA:1.10.3370.10 12 435 1.7E-158 T 23-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG62_04795 85a7647637ebbe2251e7cf6c36c4dd3d 450 Pfam PF00344 SecY translocase 81 423 9.7E-113 T 23-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CDG62_07215 1a195ef738844a8380d65256e23d29a5 117 Pfam PF06993 Protein of unknown function (DUF1304) 8 114 1.4E-41 T 23-10-2018 IPR009732 Protein of unknown function DUF1304 CDG62_08860 de3e75e26bb569a79622703f09ca0e53 917 Gene3D G3DSA:2.40.160.50 584 916 1.4E-92 T 23-10-2018 CDG62_08860 de3e75e26bb569a79622703f09ca0e53 917 Pfam PF17243 POTRA domain TamA domain 1 270 331 1.4E-6 T 23-10-2018 IPR035243 TamA, POTRA domain 1 CDG62_08860 de3e75e26bb569a79622703f09ca0e53 917 Gene3D G3DSA:3.10.20.310 421 516 1.0E-5 T 23-10-2018 CDG62_08860 de3e75e26bb569a79622703f09ca0e53 917 Pfam PF01103 Surface antigen 613 914 2.4E-33 T 23-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CDG62_08860 de3e75e26bb569a79622703f09ca0e53 917 Gene3D G3DSA:3.10.20.310 333 420 4.9E-17 T 23-10-2018 CDG62_05905 c5f8b5fb7708ef87d5896ac6317e09cf 710 Gene3D G3DSA:1.10.1040.50 498 702 3.4E-55 T 23-10-2018 CDG62_05905 c5f8b5fb7708ef87d5896ac6317e09cf 710 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 23-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDG62_05905 c5f8b5fb7708ef87d5896ac6317e09cf 710 SUPERFAMILY SSF51735 314 495 1.34E-52 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_05905 c5f8b5fb7708ef87d5896ac6317e09cf 710 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 202 6.8E-30 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDG62_05905 c5f8b5fb7708ef87d5896ac6317e09cf 710 Gene3D G3DSA:3.90.226.10 1 313 2.3E-96 T 23-10-2018 CDG62_05905 c5f8b5fb7708ef87d5896ac6317e09cf 710 Gene3D G3DSA:3.40.50.720 314 497 6.0E-62 T 23-10-2018 CDG62_05905 c5f8b5fb7708ef87d5896ac6317e09cf 710 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 597 7.5E-16 T 23-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDG62_05905 c5f8b5fb7708ef87d5896ac6317e09cf 710 SUPERFAMILY SSF48179 618 703 3.32E-14 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_05905 c5f8b5fb7708ef87d5896ac6317e09cf 710 SUPERFAMILY SSF48179 496 634 2.81E-20 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_05905 c5f8b5fb7708ef87d5896ac6317e09cf 710 SUPERFAMILY SSF52096 3 295 1.13E-58 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_05905 c5f8b5fb7708ef87d5896ac6317e09cf 710 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 2.1E-56 T 23-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 CDG62_02225 aac9d2d9a4973b1f4954fbadd59dbfdb 78 Gene3D G3DSA:3.40.30.10 5 77 2.5E-22 T 23-10-2018 CDG62_02225 aac9d2d9a4973b1f4954fbadd59dbfdb 78 SUPERFAMILY SSF52833 5 77 9.74E-24 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_02225 aac9d2d9a4973b1f4954fbadd59dbfdb 78 PRINTS PR00160 Glutaredoxin signature 49 62 2.8E-9 T 23-10-2018 IPR014025 Glutaredoxin subgroup CDG62_02225 aac9d2d9a4973b1f4954fbadd59dbfdb 78 PRINTS PR00160 Glutaredoxin signature 63 76 2.8E-9 T 23-10-2018 IPR014025 Glutaredoxin subgroup CDG62_02225 aac9d2d9a4973b1f4954fbadd59dbfdb 78 PRINTS PR00160 Glutaredoxin signature 7 25 2.8E-9 T 23-10-2018 IPR014025 Glutaredoxin subgroup CDG62_02225 aac9d2d9a4973b1f4954fbadd59dbfdb 78 Pfam PF00462 Glutaredoxin 7 66 5.7E-22 T 23-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CDG62_15005 e60536ae850c19649c697f0864713219 272 Pfam PF16960 Haemoglobin-haptoglobin utilisation, porphyrin transporter 170 269 7.1E-8 T 23-10-2018 IPR031586 Haemoglobin-haptoglobin utilisation, porphyrin transporter CDG62_15005 e60536ae850c19649c697f0864713219 272 SUPERFAMILY SSF56925 114 266 1.65E-18 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG62_15005 e60536ae850c19649c697f0864713219 272 Gene3D G3DSA:2.40.160.90 136 272 6.3E-22 T 23-10-2018 CDG62_07220 bd863227630842329ba4d4ef05ffdf56 231 SUPERFAMILY SSF51182 5 227 3.33E-63 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG62_07220 bd863227630842329ba4d4ef05ffdf56 231 Gene3D G3DSA:2.60.120.10 12 135 1.8E-79 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG62_07220 bd863227630842329ba4d4ef05ffdf56 231 Gene3D G3DSA:2.60.120.10 9 228 1.8E-79 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG62_07220 bd863227630842329ba4d4ef05ffdf56 231 Pfam PF02678 Pirin 13 119 3.9E-31 T 23-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CDG62_07220 bd863227630842329ba4d4ef05ffdf56 231 PIRSF PIRSF006232 3 225 8.2E-47 T 23-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CDG62_15195 acd41e837fa343a674bdc9b2cfbb7db8 325 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 320 1.5E-127 T 23-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CDG62_15195 acd41e837fa343a674bdc9b2cfbb7db8 325 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 325 122.188 T 23-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CDG62_15195 acd41e837fa343a674bdc9b2cfbb7db8 325 Gene3D G3DSA:3.40.630.10 1 325 2.2E-105 T 23-10-2018 CDG62_15195 acd41e837fa343a674bdc9b2cfbb7db8 325 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 322 6.8E-53 T 23-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 CDG62_15195 acd41e837fa343a674bdc9b2cfbb7db8 325 SUPERFAMILY SSF53187 1 321 1.19E-73 T 23-10-2018 CDG62_17490 7cbfacf786d373874d901274b45675ef 613 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 11 279 3.6E-83 T 23-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CDG62_17490 7cbfacf786d373874d901274b45675ef 613 Gene3D G3DSA:3.40.50.720 395 559 1.2E-35 T 23-10-2018 CDG62_17490 7cbfacf786d373874d901274b45675ef 613 Pfam PF00999 Sodium/hydrogen exchanger family 9 370 7.7E-70 T 23-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CDG62_17490 7cbfacf786d373874d901274b45675ef 613 SUPERFAMILY SSF51735 400 528 6.09E-31 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_17490 7cbfacf786d373874d901274b45675ef 613 Gene3D G3DSA:1.20.1530.20 1 380 1.6E-87 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG62_17490 7cbfacf786d373874d901274b45675ef 613 Pfam PF02254 TrkA-N domain 401 512 7.2E-25 T 23-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CDG62_18550 a6ee918f097a522da095bbb1c10f0d53 206 PIRSF PIRSF006324 1 205 7.4E-48 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_18550 a6ee918f097a522da095bbb1c10f0d53 206 Pfam PF01810 LysE type translocator 15 200 5.9E-33 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_18375 c0583325d14363617f5721490a0a223b 801 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 417 437 - T 23-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CDG62_18375 c0583325d14363617f5721490a0a223b 801 Gene3D G3DSA:3.80.30.20 413 676 7.6E-16 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDG62_18375 c0583325d14363617f5721490a0a223b 801 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 30 683 48.765 T 23-10-2018 IPR022946 Uncharacterised protein family UPF0313 CDG62_18375 c0583325d14363617f5721490a0a223b 801 Pfam PF08497 Radical SAM N-terminal 30 416 1.4E-139 T 23-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal CDG62_18375 c0583325d14363617f5721490a0a223b 801 SUPERFAMILY SSF102114 403 659 4.32E-11 T 23-10-2018 CDG62_18375 c0583325d14363617f5721490a0a223b 801 SMART SM00729 413 667 3.8E-8 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG62_18375 c0583325d14363617f5721490a0a223b 801 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 30 681 8.8E-256 T 23-10-2018 IPR022946 Uncharacterised protein family UPF0313 CDG62_18375 c0583325d14363617f5721490a0a223b 801 Pfam PF04055 Radical SAM superfamily 417 620 3.0E-19 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG62_18375 c0583325d14363617f5721490a0a223b 801 Pfam PF11842 Domain of unknown function (DUF3362) 631 779 1.7E-65 T 23-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal CDG62_10100 f1b46796fb54cae34c682790e3d76bd0 819 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 12 793 19.157 T 23-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CDG62_10100 f1b46796fb54cae34c682790e3d76bd0 819 Pfam PF04453 Organic solvent tolerance protein 344 726 1.1E-79 T 23-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 CDG62_10100 f1b46796fb54cae34c682790e3d76bd0 819 Pfam PF03968 OstA-like protein 104 236 4.0E-10 T 23-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal CDG62_16270 6557606692ddd7c299f980a96786f377 141 Gene3D G3DSA:2.20.25.10 1 46 3.3E-23 T 23-10-2018 CDG62_16270 6557606692ddd7c299f980a96786f377 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 8 139 5.3E-56 T 23-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 CDG62_16270 6557606692ddd7c299f980a96786f377 141 Pfam PF02566 OsmC-like protein 41 137 3.1E-17 T 23-10-2018 IPR003718 OsmC/Ohr family CDG62_16270 6557606692ddd7c299f980a96786f377 141 Gene3D G3DSA:3.30.300.20 47 140 2.0E-32 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG62_16270 6557606692ddd7c299f980a96786f377 141 SUPERFAMILY SSF82784 1 139 6.41E-45 T 23-10-2018 IPR036102 OsmC/Ohr superfamily CDG62_08985 270b60e50b585357469b9a2fdca730e9 447 SUPERFAMILY SSF102114 121 367 1.7E-52 T 23-10-2018 CDG62_08985 270b60e50b585357469b9a2fdca730e9 447 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 439 1.3E-103 T 23-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CDG62_08985 270b60e50b585357469b9a2fdca730e9 447 Gene3D G3DSA:3.40.50.12160 5 125 2.4E-28 T 23-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily CDG62_08985 270b60e50b585357469b9a2fdca730e9 447 SMART SM00729 137 362 9.9E-54 T 23-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 CDG62_08985 270b60e50b585357469b9a2fdca730e9 447 Gene3D G3DSA:2.40.50.140 377 446 2.3E-19 T 23-10-2018 CDG62_08985 270b60e50b585357469b9a2fdca730e9 447 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 23-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CDG62_08985 270b60e50b585357469b9a2fdca730e9 447 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 4 441 60.974 T 23-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CDG62_08985 270b60e50b585357469b9a2fdca730e9 447 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 438 3.3E-181 T 23-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CDG62_08985 270b60e50b585357469b9a2fdca730e9 447 Pfam PF04055 Radical SAM superfamily 143 320 1.1E-28 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG62_08985 270b60e50b585357469b9a2fdca730e9 447 Pfam PF00919 Uncharacterized protein family UPF0004 5 95 1.3E-20 T 23-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CDG62_08985 270b60e50b585357469b9a2fdca730e9 447 Gene3D G3DSA:3.80.30.20 135 376 1.3E-71 T 23-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe CDG62_17080 1223ecbd0ea34cb58498a1d91a1b5647 631 SMART SM00382 344 514 5.6E-10 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_17080 1223ecbd0ea34cb58498a1d91a1b5647 631 SMART SM00382 28 229 4.0E-14 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_17080 1223ecbd0ea34cb58498a1d91a1b5647 631 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_17080 1223ecbd0ea34cb58498a1d91a1b5647 631 Pfam PF00005 ABC transporter 19 183 5.2E-25 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_17080 1223ecbd0ea34cb58498a1d91a1b5647 631 Pfam PF16326 ABC transporter C-terminal domain 559 627 6.0E-20 T 23-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CDG62_17080 1223ecbd0ea34cb58498a1d91a1b5647 631 Pfam PF00005 ABC transporter 336 468 2.6E-18 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_17080 1223ecbd0ea34cb58498a1d91a1b5647 631 Pfam PF12848 ABC transporter 223 299 4.1E-12 T 23-10-2018 IPR032781 ABC-transporter extension domain CDG62_17080 1223ecbd0ea34cb58498a1d91a1b5647 631 Gene3D G3DSA:3.40.50.300 280 548 1.1E-60 T 23-10-2018 CDG62_17080 1223ecbd0ea34cb58498a1d91a1b5647 631 Gene3D G3DSA:1.10.287.380 549 631 6.2E-19 T 23-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CDG62_17080 1223ecbd0ea34cb58498a1d91a1b5647 631 SUPERFAMILY SSF52540 309 502 5.41E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17080 1223ecbd0ea34cb58498a1d91a1b5647 631 Gene3D G3DSA:3.40.50.300 4 278 1.1E-66 T 23-10-2018 CDG62_17080 1223ecbd0ea34cb58498a1d91a1b5647 631 SUPERFAMILY SSF52540 3 241 1.11E-48 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_13300 99eca3432e0d2d2d7b672c0620ec4bac 320 Gene3D G3DSA:1.10.10.60 212 318 4.2E-21 T 23-10-2018 CDG62_13300 99eca3432e0d2d2d7b672c0620ec4bac 320 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 296 1.1E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_13300 99eca3432e0d2d2d7b672c0620ec4bac 320 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 296 312 1.1E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_13300 99eca3432e0d2d2d7b672c0620ec4bac 320 SMART SM00342 230 312 1.0E-19 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_13300 99eca3432e0d2d2d7b672c0620ec4bac 320 SUPERFAMILY SSF46689 267 313 4.21E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_13300 99eca3432e0d2d2d7b672c0620ec4bac 320 Pfam PF12833 Helix-turn-helix domain 237 312 4.1E-17 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_13300 99eca3432e0d2d2d7b672c0620ec4bac 320 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 16 168 1.0E-16 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG62_16720 3a8601dc9ccdce5de63bd9300aad7040 273 PIRSF PIRSF005902 1 273 8.9E-57 T 23-10-2018 IPR001130 TatD family GO:0016788 CDG62_16720 3a8601dc9ccdce5de63bd9300aad7040 273 SUPERFAMILY SSF51556 5 267 9.77E-69 T 23-10-2018 IPR032466 Metal-dependent hydrolase CDG62_16720 3a8601dc9ccdce5de63bd9300aad7040 273 Pfam PF01026 TatD related DNase 6 269 2.8E-56 T 23-10-2018 IPR001130 TatD family GO:0016788 CDG62_16720 3a8601dc9ccdce5de63bd9300aad7040 273 Gene3D G3DSA:3.20.20.140 1 269 1.7E-68 T 23-10-2018 CDG62_16720 3a8601dc9ccdce5de63bd9300aad7040 273 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 23-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CDG62_04375 f7ce5eabdda7d47a05c222d5cf6bb8fe 152 Gene3D G3DSA:1.20.120.520 1 141 2.2E-7 T 23-10-2018 CDG62_04375 f7ce5eabdda7d47a05c222d5cf6bb8fe 152 Pfam PF01814 Hemerythrin HHE cation binding domain 3 119 3.3E-11 T 23-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CDG62_13675 4de0c97090a65e3ef2f24195e3a42f79 243 SUPERFAMILY SSF101322 13 236 6.8E-50 T 23-10-2018 IPR035932 HflD-like superfamily CDG62_13675 4de0c97090a65e3ef2f24195e3a42f79 243 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 11 237 25.947 T 23-10-2018 IPR007451 High frequency lysogenization protein HflD CDG62_13675 4de0c97090a65e3ef2f24195e3a42f79 243 Gene3D G3DSA:1.10.3890.10 12 241 4.5E-60 T 23-10-2018 IPR035932 HflD-like superfamily CDG62_13675 4de0c97090a65e3ef2f24195e3a42f79 243 Pfam PF04356 Protein of unknown function (DUF489) 17 230 3.7E-52 T 23-10-2018 IPR007451 High frequency lysogenization protein HflD CDG62_13675 4de0c97090a65e3ef2f24195e3a42f79 243 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 20 229 5.0E-102 T 23-10-2018 CDG62_16980 651378834b6dabccb0f358ef0ea6525a 255 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 185 248 1.2E-9 T 23-10-2018 IPR037682 TonB, C-terminal GO:0055085 CDG62_16980 651378834b6dabccb0f358ef0ea6525a 255 Gene3D G3DSA:3.30.1150.10 128 252 7.5E-13 T 23-10-2018 CDG62_16980 651378834b6dabccb0f358ef0ea6525a 255 SUPERFAMILY SSF74653 151 252 9.03E-15 T 23-10-2018 CDG62_16980 651378834b6dabccb0f358ef0ea6525a 255 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 185 248 1.4E-12 T 23-10-2018 IPR006260 TonB/TolA, C-terminal CDG62_10940 26ebf9d31b121df7ad7ff033e3663cf9 109 Gene3D G3DSA:1.10.3730.20 1 108 2.5E-32 T 23-10-2018 CDG62_10940 26ebf9d31b121df7ad7ff033e3663cf9 109 SUPERFAMILY SSF103481 4 105 1.05E-15 T 23-10-2018 CDG62_10940 26ebf9d31b121df7ad7ff033e3663cf9 109 Pfam PF00893 Small Multidrug Resistance protein 1 91 7.2E-24 T 23-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CDG62_12135 927be573334d9ec51181be49f5e70319 214 Pfam PF00849 RNA pseudouridylate synthase 15 164 1.3E-28 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_12135 927be573334d9ec51181be49f5e70319 214 Gene3D G3DSA:3.30.2350.10 5 213 9.3E-64 T 23-10-2018 CDG62_12135 927be573334d9ec51181be49f5e70319 214 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 53 67 - T 23-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_12135 927be573334d9ec51181be49f5e70319 214 SUPERFAMILY SSF55120 7 213 3.04E-59 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_13430 338b04403c1cfc272786a1cb480931c4 447 Gene3D G3DSA:1.10.287.400 380 443 4.3E-31 T 23-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CDG62_13430 338b04403c1cfc272786a1cb480931c4 447 Gene3D G3DSA:3.90.1260.10 77 370 7.8E-118 T 23-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG62_13430 338b04403c1cfc272786a1cb480931c4 447 Pfam PF00764 Arginosuccinate synthase 19 412 1.2E-59 T 23-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG62_13430 338b04403c1cfc272786a1cb480931c4 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 16 422 2.3E-162 T 23-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG62_13430 338b04403c1cfc272786a1cb480931c4 447 SUPERFAMILY SSF52402 8 191 1.74E-34 T 23-10-2018 CDG62_13430 338b04403c1cfc272786a1cb480931c4 447 SUPERFAMILY SSF69864 193 445 1.31E-80 T 23-10-2018 CDG62_13430 338b04403c1cfc272786a1cb480931c4 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 20 28 - T 23-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG62_13430 338b04403c1cfc272786a1cb480931c4 447 Gene3D G3DSA:3.40.50.620 17 194 7.8E-118 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_13430 338b04403c1cfc272786a1cb480931c4 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 132 143 - T 23-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CDG62_03810 e8ee5f81b70390b46d7e3912044e5dd4 348 PIRSF PIRSF005632 1 344 4.3E-197 T 23-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit CDG62_03810 e8ee5f81b70390b46d7e3912044e5dd4 348 Gene3D G3DSA:3.20.20.210 1 343 3.8E-133 T 23-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CDG62_03810 e8ee5f81b70390b46d7e3912044e5dd4 348 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 5.3E-37 T 23-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CDG62_03810 e8ee5f81b70390b46d7e3912044e5dd4 348 SUPERFAMILY SSF51726 7 341 1.57E-70 T 23-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 CDG62_12950 c8799d1c8eddd751909c6547514b392d 222 Gene3D G3DSA:3.40.50.620 3 218 3.0E-73 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_12950 c8799d1c8eddd751909c6547514b392d 222 Pfam PF06508 Queuosine biosynthesis protein QueC 4 212 5.9E-77 T 23-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CDG62_12950 c8799d1c8eddd751909c6547514b392d 222 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 205 5.6E-63 T 23-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CDG62_12950 c8799d1c8eddd751909c6547514b392d 222 PIRSF PIRSF006293 1 222 6.5E-78 T 23-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CDG62_12950 c8799d1c8eddd751909c6547514b392d 222 SUPERFAMILY SSF52402 4 222 1.37E-64 T 23-10-2018 CDG62_12950 c8799d1c8eddd751909c6547514b392d 222 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 218 54.8 T 23-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CDG62_06180 127db7ada9ba92bc5184a288dd7009bb 467 Pfam PF02978 Signal peptide binding domain 329 429 3.1E-30 T 23-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CDG62_06180 127db7ada9ba92bc5184a288dd7009bb 467 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.2E-22 T 23-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG62_06180 127db7ada9ba92bc5184a288dd7009bb 467 SMART SM00963 1 86 8.0E-37 T 23-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG62_06180 127db7ada9ba92bc5184a288dd7009bb 467 Gene3D G3DSA:1.20.120.140 5 305 2.0E-122 T 23-10-2018 CDG62_06180 127db7ada9ba92bc5184a288dd7009bb 467 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 431 3.1E-176 T 23-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CDG62_06180 127db7ada9ba92bc5184a288dd7009bb 467 SUPERFAMILY SSF52540 42 351 8.58E-57 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_06180 127db7ada9ba92bc5184a288dd7009bb 467 SMART SM00962 100 296 7.8E-112 T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG62_06180 127db7ada9ba92bc5184a288dd7009bb 467 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 1.8E-73 T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG62_06180 127db7ada9ba92bc5184a288dd7009bb 467 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 442 34.099 T 23-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CDG62_06180 127db7ada9ba92bc5184a288dd7009bb 467 Gene3D G3DSA:1.10.260.30 310 452 1.2E-36 T 23-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CDG62_06180 127db7ada9ba92bc5184a288dd7009bb 467 Gene3D G3DSA:3.40.50.300 90 285 2.0E-122 T 23-10-2018 CDG62_06180 127db7ada9ba92bc5184a288dd7009bb 467 SUPERFAMILY SSF47446 298 432 1.05E-43 T 23-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CDG62_06180 127db7ada9ba92bc5184a288dd7009bb 467 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 23-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CDG62_06180 127db7ada9ba92bc5184a288dd7009bb 467 SMART SM00382 99 247 5.8E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_14685 32606a28df866303e7d523bafff5d40b 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 226 6.1E-17 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_14685 32606a28df866303e7d523bafff5d40b 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 120 1.2E-23 T 23-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 CDG62_14685 32606a28df866303e7d523bafff5d40b 227 SUPERFAMILY SSF161098 16 211 1.07E-36 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_14685 32606a28df866303e7d523bafff5d40b 227 Gene3D G3DSA:1.10.3720.10 9 226 6.6E-44 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_09110 8f119da33071871dd800373d489ff777 221 Gene3D G3DSA:3.40.50.720 1 221 1.4E-44 T 23-10-2018 CDG62_09110 8f119da33071871dd800373d489ff777 221 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 83 2.4E-5 T 23-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CDG62_09110 8f119da33071871dd800373d489ff777 221 SUPERFAMILY SSF51735 8 211 3.33E-29 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_14110 9838446942cb6bce8bdc57332fb5e6db 180 SUPERFAMILY SSF53271 3 156 1.09E-32 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG62_14110 9838446942cb6bce8bdc57332fb5e6db 180 Pfam PF00156 Phosphoribosyl transferase domain 41 153 2.4E-17 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDG62_14110 9838446942cb6bce8bdc57332fb5e6db 180 Gene3D G3DSA:3.40.50.2020 1 170 1.0E-41 T 23-10-2018 CDG62_15465 e41e44cb385c1466b32364fd6f2330b8 211 PIRSF PIRSF001296 22 210 4.2E-67 T 23-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CDG62_15465 e41e44cb385c1466b32364fd6f2330b8 211 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 25 206 3.8E-55 T 23-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CDG62_15465 e41e44cb385c1466b32364fd6f2330b8 211 Pfam PF02669 K+-transporting ATPase, c chain 26 205 7.1E-67 T 23-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CDG62_15465 e41e44cb385c1466b32364fd6f2330b8 211 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 22 206 32.091 T 23-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CDG62_09070 fc123a7ecfd8ace022dcf54189e4b160 224 SUPERFAMILY SSF56784 5 210 3.47E-37 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_09070 fc123a7ecfd8ace022dcf54189e4b160 224 Gene3D G3DSA:3.40.50.1000 5 189 3.0E-28 T 23-10-2018 IPR023214 HAD superfamily CDG62_09070 fc123a7ecfd8ace022dcf54189e4b160 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 181 8.8E-17 T 23-10-2018 CDG62_09070 fc123a7ecfd8ace022dcf54189e4b160 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 5 181 1.2E-9 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_17275 4c355f075e2bdfff8e3993ede3da9683 312 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 18 306 2.1E-79 T 23-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_17275 4c355f075e2bdfff8e3993ede3da9683 312 Pfam PF00849 RNA pseudouridylate synthase 104 248 1.9E-29 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_17275 4c355f075e2bdfff8e3993ede3da9683 312 Pfam PF01479 S4 domain 22 68 7.8E-11 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_17275 4c355f075e2bdfff8e3993ede3da9683 312 SUPERFAMILY SSF55174 21 72 4.97E-10 T 23-10-2018 CDG62_17275 4c355f075e2bdfff8e3993ede3da9683 312 Gene3D G3DSA:3.30.2350.10 95 310 1.2E-66 T 23-10-2018 CDG62_17275 4c355f075e2bdfff8e3993ede3da9683 312 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 23-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_17275 4c355f075e2bdfff8e3993ede3da9683 312 SUPERFAMILY SSF55120 96 307 2.88E-56 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_17275 4c355f075e2bdfff8e3993ede3da9683 312 SMART SM00363 22 83 4.4E-9 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_17275 4c355f075e2bdfff8e3993ede3da9683 312 Gene3D G3DSA:3.10.290.10 10 77 3.4E-19 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDG62_19255 7d65c1a20020e525331b75ca22e41542 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.163 T 23-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_19255 7d65c1a20020e525331b75ca22e41542 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.1E-26 T 23-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_19255 7d65c1a20020e525331b75ca22e41542 44 Pfam PF00468 Ribosomal protein L34 1 44 1.8E-25 T 23-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_19255 7d65c1a20020e525331b75ca22e41542 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 23-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_19255 7d65c1a20020e525331b75ca22e41542 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 2.0E-14 T 23-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_16595 1cdd61c6bb92b3abd55ea8639d5dd1f3 253 Gene3D G3DSA:3.60.40.10 39 250 2.6E-26 T 23-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDG62_16595 1cdd61c6bb92b3abd55ea8639d5dd1f3 253 SMART SM00332 3 249 0.0012 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDG62_16595 1cdd61c6bb92b3abd55ea8639d5dd1f3 253 Pfam PF00481 Protein phosphatase 2C 41 147 6.6E-6 T 23-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDG62_16595 1cdd61c6bb92b3abd55ea8639d5dd1f3 253 SUPERFAMILY SSF81606 8 250 2.62E-27 T 23-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CDG62_18370 0851858dd0e91415466c020a2e44c0b9 180 Pfam PF10881 Protein of unknown function (DUF2726) 37 146 1.4E-11 T 23-10-2018 IPR024402 Domain of unknown function DUF2726 CDG62_14620 25f3164afd7143c227a608a2f3f91ec0 151 Gene3D G3DSA:1.20.1260.50 1 150 2.0E-50 T 23-10-2018 CDG62_05340 dd4de567e60f0281c8c97f5e52824c7d 381 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 380 28.027 T 23-10-2018 IPR017687 Outer membrane protein assembly factor BamB CDG62_05340 dd4de567e60f0281c8c97f5e52824c7d 381 Pfam PF13360 PQQ-like domain 78 308 3.4E-41 T 23-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat CDG62_05340 dd4de567e60f0281c8c97f5e52824c7d 381 Gene3D G3DSA:2.130.10.10 44 380 4.6E-81 T 23-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDG62_05340 dd4de567e60f0281c8c97f5e52824c7d 381 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 9 379 6.6E-109 T 23-10-2018 IPR017687 Outer membrane protein assembly factor BamB CDG62_05340 dd4de567e60f0281c8c97f5e52824c7d 381 SUPERFAMILY SSF50998 33 366 1.55E-61 T 23-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDG62_05340 dd4de567e60f0281c8c97f5e52824c7d 381 SMART SM00564 241 272 45.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_05340 dd4de567e60f0281c8c97f5e52824c7d 381 SMART SM00564 144 175 0.044 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_05340 dd4de567e60f0281c8c97f5e52824c7d 381 SMART SM00564 103 135 3.2E-5 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_05340 dd4de567e60f0281c8c97f5e52824c7d 381 SMART SM00564 190 221 66.0 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_05340 dd4de567e60f0281c8c97f5e52824c7d 381 SMART SM00564 279 310 0.016 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_05340 dd4de567e60f0281c8c97f5e52824c7d 381 SMART SM00564 320 351 1.5 T 23-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDG62_06210 270873ce41e42415fb625773ac46d87b 1150 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1140 20.754 T 23-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CDG62_06210 270873ce41e42415fb625773ac46d87b 1150 Gene3D G3DSA:3.40.50.300 1 263 2.7E-52 T 23-10-2018 CDG62_06210 270873ce41e42415fb625773ac46d87b 1150 Pfam PF02463 RecF/RecN/SMC N terminal domain 712 1131 1.7E-27 T 23-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CDG62_06210 270873ce41e42415fb625773ac46d87b 1150 PIRSF PIRSF005719 1 558 1.1E-114 T 23-10-2018 IPR024704 Structural maintenance of chromosomes protein CDG62_06210 270873ce41e42415fb625773ac46d87b 1150 PIRSF PIRSF005719 582 1145 1.1E-112 T 23-10-2018 IPR024704 Structural maintenance of chromosomes protein CDG62_06210 270873ce41e42415fb625773ac46d87b 1150 Gene3D G3DSA:3.40.50.300 920 1147 7.5E-47 T 23-10-2018 CDG62_06210 270873ce41e42415fb625773ac46d87b 1150 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1138 3.3E-270 T 23-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CDG62_06210 270873ce41e42415fb625773ac46d87b 1150 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 138 4.3E-34 T 23-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CDG62_06210 270873ce41e42415fb625773ac46d87b 1150 SUPERFAMILY SSF52540 1 1123 2.64E-49 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_11725 9709c81bf326630a6c10236d8062ea9a 155 SUPERFAMILY SSF55826 2 152 1.06E-43 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDG62_11725 9709c81bf326630a6c10236d8062ea9a 155 Gene3D G3DSA:3.90.960.10 1 154 3.7E-59 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDG62_11725 9709c81bf326630a6c10236d8062ea9a 155 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 152 4.3E-59 T 23-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CDG62_11725 9709c81bf326630a6c10236d8062ea9a 155 PIRSF PIRSF006181 1 155 1.4E-58 T 23-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CDG62_11725 9709c81bf326630a6c10236d8062ea9a 155 Pfam PF04073 Aminoacyl-tRNA editing domain 32 143 6.5E-27 T 23-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CDG62_01300 e3c2d7d4a3e43d694f8b2292d8ee380f 562 SUPERFAMILY SSF48452 367 527 5.31E-8 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_01300 e3c2d7d4a3e43d694f8b2292d8ee380f 562 SUPERFAMILY SSF48452 6 116 4.93E-6 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_18060 d4e42a4240ce5fb81dc401584b906cca 246 Gene3D G3DSA:3.40.50.2300 1 133 4.7E-37 T 23-10-2018 CDG62_18060 d4e42a4240ce5fb81dc401584b906cca 246 SUPERFAMILY SSF52172 1 179 1.71E-35 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_18060 d4e42a4240ce5fb81dc401584b906cca 246 Pfam PF04397 LytTr DNA-binding domain 150 243 2.9E-20 T 23-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CDG62_18060 d4e42a4240ce5fb81dc401584b906cca 246 SMART SM00850 147 244 2.9E-24 T 23-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CDG62_18060 d4e42a4240ce5fb81dc401584b906cca 246 Gene3D G3DSA:2.40.50.40 138 206 2.4E-10 T 23-10-2018 CDG62_18060 d4e42a4240ce5fb81dc401584b906cca 246 SMART SM00448 1 111 1.4E-31 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_18060 d4e42a4240ce5fb81dc401584b906cca 246 Pfam PF00072 Response regulator receiver domain 3 110 8.1E-27 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_18440 5712f1ddcbe7175a6041421318f8d967 306 Pfam PF00892 EamA-like transporter family 159 289 8.0E-20 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_18440 5712f1ddcbe7175a6041421318f8d967 306 Pfam PF00892 EamA-like transporter family 11 144 4.3E-23 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_18440 5712f1ddcbe7175a6041421318f8d967 306 SUPERFAMILY SSF103481 44 147 2.22E-12 T 23-10-2018 CDG62_18440 5712f1ddcbe7175a6041421318f8d967 306 SUPERFAMILY SSF103481 195 293 1.28E-11 T 23-10-2018 CDG62_07570 013abb33869a352a83c3721ea682c371 257 Pfam PF01061 ABC-2 type transporter 10 219 4.8E-36 T 23-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CDG62_07570 013abb33869a352a83c3721ea682c371 257 PIRSF PIRSF006648 2 254 2.1E-21 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDG62_07570 013abb33869a352a83c3721ea682c371 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 1.4E-6 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDG62_07570 013abb33869a352a83c3721ea682c371 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 1.4E-6 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDG62_07570 013abb33869a352a83c3721ea682c371 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 59 81 1.4E-6 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDG62_07570 013abb33869a352a83c3721ea682c371 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 1.4E-6 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDG62_13445 c151a387307ce7d0b7c5348b6849fbfa 219 SUPERFAMILY SSF53098 12 209 2.87E-51 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_13445 c151a387307ce7d0b7c5348b6849fbfa 219 TIGRFAM TIGR01298 RNaseT: ribonuclease T 14 207 2.1E-82 T 23-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CDG62_13445 c151a387307ce7d0b7c5348b6849fbfa 219 SMART SM00479 21 209 9.7E-20 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG62_13445 c151a387307ce7d0b7c5348b6849fbfa 219 Pfam PF00929 Exonuclease 23 200 1.9E-31 T 23-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CDG62_13445 c151a387307ce7d0b7c5348b6849fbfa 219 Gene3D G3DSA:3.30.420.10 12 210 1.2E-44 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_13445 c151a387307ce7d0b7c5348b6849fbfa 219 Hamap MF_00157 Ribonuclease T [rnt]. 1 219 90.202 T 23-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CDG62_00065 a1bb21011fd4d6ff966604b0036891ca 670 SUPERFAMILY SSF51294 60 213 1.57E-24 T 23-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDG62_00065 a1bb21011fd4d6ff966604b0036891ca 670 Gene3D G3DSA:3.40.50.300 208 360 2.4E-11 T 23-10-2018 CDG62_00065 a1bb21011fd4d6ff966604b0036891ca 670 Pfam PF05203 Hom_end-associated Hint 61 139 8.8E-12 T 23-10-2018 IPR007868 Hom-end-associated Hint GO:0030908 CDG62_00065 a1bb21011fd4d6ff966604b0036891ca 670 Gene3D G3DSA:2.170.16.10 52 184 1.4E-18 T 23-10-2018 CDG62_05600 011610d4b946f7655d9755ce8d48e51a 213 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 205 2.9E-62 T 23-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CDG62_05600 011610d4b946f7655d9755ce8d48e51a 213 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 210 40.553 T 23-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CDG62_05600 011610d4b946f7655d9755ce8d48e51a 213 Gene3D G3DSA:3.20.20.70 2 211 7.6E-68 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_05600 011610d4b946f7655d9755ce8d48e51a 213 SUPERFAMILY SSF51366 4 207 4.08E-61 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG62_00460 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Gene3D G3DSA:3.30.200.20 4 92 1.6E-7 T 23-10-2018 CDG62_00460 894e1f0ad6ba9ed50160bb983b4c7ca4 294 SUPERFAMILY SSF56112 31 242 1.11E-22 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_00460 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Gene3D G3DSA:3.90.1200.10 103 292 1.5E-25 T 23-10-2018 CDG62_00460 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Pfam PF01636 Phosphotransferase enzyme family 27 245 2.3E-21 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase CDG62_02735 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Gene3D G3DSA:3.30.200.20 4 92 1.6E-7 T 23-10-2018 CDG62_02735 894e1f0ad6ba9ed50160bb983b4c7ca4 294 SUPERFAMILY SSF56112 31 242 1.11E-22 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_02735 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Gene3D G3DSA:3.90.1200.10 103 292 1.5E-25 T 23-10-2018 CDG62_02735 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Pfam PF01636 Phosphotransferase enzyme family 27 245 2.3E-21 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase CDG62_11465 1033965be86036bdcf1d3e4e43edf41c 413 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 138 239 1.2E-17 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG62_11465 1033965be86036bdcf1d3e4e43edf41c 413 SUPERFAMILY SSF56645 4 264 9.95E-59 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_11465 1033965be86036bdcf1d3e4e43edf41c 413 Gene3D G3DSA:2.40.110.10 136 251 7.6E-42 T 23-10-2018 CDG62_11465 1033965be86036bdcf1d3e4e43edf41c 413 SUPERFAMILY SSF47203 250 403 2.09E-38 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_11465 1033965be86036bdcf1d3e4e43edf41c 413 Gene3D G3DSA:1.20.140.10 252 409 9.7E-34 T 23-10-2018 CDG62_11465 1033965be86036bdcf1d3e4e43edf41c 413 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 251 399 7.8E-31 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG62_11465 1033965be86036bdcf1d3e4e43edf41c 413 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 132 1.5E-13 T 23-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CDG62_11465 1033965be86036bdcf1d3e4e43edf41c 413 Gene3D G3DSA:1.10.540.10 1 135 4.0E-47 T 23-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 CDG62_03930 e3bc82ea8485f9b97862d840de0a6a15 362 Pfam PF01223 DNA/RNA non-specific endonuclease 75 262 1.0E-41 T 23-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 CDG62_03930 e3bc82ea8485f9b97862d840de0a6a15 362 SMART SM00477 82 270 1.8E-29 T 23-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 CDG62_03930 e3bc82ea8485f9b97862d840de0a6a15 362 SMART SM00892 81 270 8.1E-40 T 23-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 CDG62_03930 e3bc82ea8485f9b97862d840de0a6a15 362 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 141 149 - T 23-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 CDG62_03930 e3bc82ea8485f9b97862d840de0a6a15 362 Gene3D G3DSA:3.40.570.10 68 287 2.2E-53 T 23-10-2018 CDG62_03930 e3bc82ea8485f9b97862d840de0a6a15 362 SUPERFAMILY SSF54060 55 277 3.77E-61 T 23-10-2018 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 ProSitePatterns PS00450 Aconitase family signature 1. 451 467 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 Pfam PF00694 Aconitase C-terminal domain 715 841 2.1E-48 T 23-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 Gene3D G3DSA:3.20.19.10 677 916 1.9E-109 T 23-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 22 915 0.0 T 23-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 Gene3D G3DSA:3.30.499.10 376 614 2.1E-97 T 23-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 SUPERFAMILY SSF52016 653 914 1.45E-89 T 23-10-2018 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 Gene3D G3DSA:3.30.499.20 8 375 3.1E-161 T 23-10-2018 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 Gene3D G3DSA:1.10.1440.20 615 674 3.1E-19 T 23-10-2018 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 Pfam PF00330 Aconitase family (aconitate hydratase) 72 586 7.7E-182 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 ProSitePatterns PS01244 Aconitase family signature 2. 517 530 - T 23-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 PRINTS PR00415 Aconitase family signature 173 181 1.1E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 PRINTS PR00415 Aconitase family signature 375 389 1.1E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 PRINTS PR00415 Aconitase family signature 296 309 1.1E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 PRINTS PR00415 Aconitase family signature 149 162 1.1E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 PRINTS PR00415 Aconitase family signature 206 219 1.1E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 PRINTS PR00415 Aconitase family signature 220 235 1.1E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 PRINTS PR00415 Aconitase family signature 282 295 1.1E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 PRINTS PR00415 Aconitase family signature 455 466 1.1E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 PRINTS PR00415 Aconitase family signature 517 530 1.1E-40 T 23-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 CDG62_16715 27c0cff4646eee6c9d7f1958c8299039 917 SUPERFAMILY SSF53732 7 650 1.15E-223 T 23-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 CDG62_11730 71648d3da30dfe8becf3f136d3187ae4 398 Pfam PF00487 Fatty acid desaturase 129 338 1.2E-25 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CDG62_09910 e0e75813cda17f48a781e07dd3035741 70 SUPERFAMILY SSF55331 2 67 1.04E-18 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily CDG62_09910 e0e75813cda17f48a781e07dd3035741 70 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 65 1.5E-21 T 23-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 CDG62_09910 e0e75813cda17f48a781e07dd3035741 70 Gene3D G3DSA:3.30.429.10 2 67 1.5E-22 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily CDG62_09910 e0e75813cda17f48a781e07dd3035741 70 Pfam PF01361 Tautomerase enzyme 2 61 7.4E-21 T 23-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CDG62_14565 0f3158255d9f654e5abe17ca53da8d9d 670 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 138 574 3.0E-92 T 23-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDG62_14565 0f3158255d9f654e5abe17ca53da8d9d 670 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 40 662 3.1E-236 T 23-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ CDG62_08520 8adc4eaf1d9cca74914dcc37a9046e07 221 SUPERFAMILY SSF53335 4 220 3.61E-38 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_08520 8adc4eaf1d9cca74914dcc37a9046e07 221 Gene3D G3DSA:3.40.50.150 1 221 9.3E-63 T 23-10-2018 CDG62_08520 8adc4eaf1d9cca74914dcc37a9046e07 221 Pfam PF01596 O-methyltransferase 20 193 2.3E-39 T 23-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 CDG62_00245 cf510878f900833901a8ede3b88b1f12 78 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 56 76 8.7E-5 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG62_00245 cf510878f900833901a8ede3b88b1f12 78 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 39 56 8.7E-5 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG62_00245 cf510878f900833901a8ede3b88b1f12 78 SUPERFAMILY SSF46689 9 74 1.68E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_00245 cf510878f900833901a8ede3b88b1f12 78 Gene3D G3DSA:1.10.10.60 13 75 7.6E-11 T 23-10-2018 CDG62_00245 cf510878f900833901a8ede3b88b1f12 78 Pfam PF02954 Bacterial regulatory protein, Fis family 33 73 1.8E-9 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG62_17695 0db53b329a196266c5a71dd3f5567c02 263 ProSitePatterns PS00171 Triosephosphate isomerase active site. 176 186 - T 23-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_17695 0db53b329a196266c5a71dd3f5567c02 263 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 10 249 1.8E-51 T 23-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_17695 0db53b329a196266c5a71dd3f5567c02 263 Pfam PF00121 Triosephosphate isomerase 9 256 1.2E-82 T 23-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_17695 0db53b329a196266c5a71dd3f5567c02 263 SUPERFAMILY SSF51351 7 260 2.36E-81 T 23-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_17695 0db53b329a196266c5a71dd3f5567c02 263 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 6 258 55.466 T 23-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_17695 0db53b329a196266c5a71dd3f5567c02 263 Gene3D G3DSA:3.20.20.70 5 263 7.9E-89 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_04810 d62d98601d5b7b74164ddb0d4040b590 128 SUPERFAMILY SSF53137 15 128 5.89E-47 T 23-10-2018 CDG62_04810 d62d98601d5b7b74164ddb0d4040b590 128 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 9 125 3.1E-54 T 23-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04810 d62d98601d5b7b74164ddb0d4040b590 128 ProSitePatterns PS00054 Ribosomal protein S11 signature. 96 118 - T 23-10-2018 IPR018102 Ribosomal S11, conserved site CDG62_04810 d62d98601d5b7b74164ddb0d4040b590 128 Pfam PF00411 Ribosomal protein S11 18 127 3.5E-50 T 23-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CDG62_04810 d62d98601d5b7b74164ddb0d4040b590 128 Gene3D G3DSA:3.30.420.80 1 128 5.2E-54 T 23-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 CDG62_04810 d62d98601d5b7b74164ddb0d4040b590 128 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 128 32.395 T 23-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CDG62_04810 d62d98601d5b7b74164ddb0d4040b590 128 PIRSF PIRSF002131 1 128 1.4E-51 T 23-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CDG62_15150 358abb7936418849cc426b9373075a5d 401 PIRSF PIRSF000429 1 401 3.5E-129 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_15150 358abb7936418849cc426b9373075a5d 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 23-10-2018 IPR020613 Thiolase, conserved site GO:0016747 CDG62_15150 358abb7936418849cc426b9373075a5d 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 23-10-2018 IPR020610 Thiolase, active site GO:0016747 CDG62_15150 358abb7936418849cc426b9373075a5d 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 3.1E-137 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_15150 358abb7936418849cc426b9373075a5d 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 401 7.3E-222 T 23-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 CDG62_15150 358abb7936418849cc426b9373075a5d 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 CDG62_15150 358abb7936418849cc426b9373075a5d 401 Pfam PF00108 Thiolase, N-terminal domain 5 268 5.3E-79 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG62_15150 358abb7936418849cc426b9373075a5d 401 Gene3D G3DSA:3.40.47.10 6 282 8.6E-156 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_15150 358abb7936418849cc426b9373075a5d 401 SUPERFAMILY SSF53901 3 276 7.25E-81 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_15150 358abb7936418849cc426b9373075a5d 401 Pfam PF02803 Thiolase, C-terminal domain 276 400 3.1E-45 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG62_15150 358abb7936418849cc426b9373075a5d 401 SUPERFAMILY SSF53901 277 400 8.64E-44 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_15150 358abb7936418849cc426b9373075a5d 401 Gene3D G3DSA:3.40.47.10 141 398 8.6E-156 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_18805 5cb4635fbeeb65d2bde8472867dca5f8 464 Pfam PF02219 Methylenetetrahydrofolate reductase 57 262 9.5E-21 T 23-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CDG62_18805 5cb4635fbeeb65d2bde8472867dca5f8 464 Gene3D G3DSA:3.20.20.220 27 276 6.1E-28 T 23-10-2018 CDG62_18805 5cb4635fbeeb65d2bde8472867dca5f8 464 SUPERFAMILY SSF51730 1 278 7.46E-40 T 23-10-2018 IPR029041 FAD-linked oxidoreductase-like CDG62_18805 5cb4635fbeeb65d2bde8472867dca5f8 464 Pfam PF12225 Methylene-tetrahydrofolate reductase C terminal 358 443 4.1E-19 T 23-10-2018 IPR022026 Methylene-tetrahydrofolate reductase C-terminal CDG62_14840 693c31b3d15962626bdbe8700a255a0f 144 Pfam PF03960 ArsC family 10 118 2.8E-12 T 23-10-2018 IPR006660 Arsenate reductase-like CDG62_14840 693c31b3d15962626bdbe8700a255a0f 144 SUPERFAMILY SSF52833 7 140 7.51E-35 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_14840 693c31b3d15962626bdbe8700a255a0f 144 Gene3D G3DSA:3.40.30.10 5 144 4.4E-53 T 23-10-2018 CDG62_14840 693c31b3d15962626bdbe8700a255a0f 144 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 7 119 3.7E-38 T 23-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CDG62_07060 01099e037da3bfcafc7a08fbedcb7086 283 Gene3D G3DSA:3.20.20.20 2 283 2.8E-110 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_07060 01099e037da3bfcafc7a08fbedcb7086 283 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 59 72 - T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_07060 01099e037da3bfcafc7a08fbedcb7086 283 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 25 280 6.9E-98 T 23-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CDG62_07060 01099e037da3bfcafc7a08fbedcb7086 283 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 25 40 - T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_07060 01099e037da3bfcafc7a08fbedcb7086 283 SUPERFAMILY SSF51717 11 280 9.81E-97 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_07060 01099e037da3bfcafc7a08fbedcb7086 283 Pfam PF00809 Pterin binding enzyme 26 265 4.7E-83 T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_04675 af4325b8c51262727a3ea8c07b8fe5cf 526 Gene3D G3DSA:3.40.50.300 203 380 4.0E-21 T 23-10-2018 CDG62_04675 af4325b8c51262727a3ea8c07b8fe5cf 526 Pfam PF05872 Bacterial protein of unknown function (DUF853) 10 525 1.3E-224 T 23-10-2018 IPR033186 Helicase HerA-like C-terminal CDG62_04675 af4325b8c51262727a3ea8c07b8fe5cf 526 Gene3D G3DSA:3.40.50.300 3 84 9.4E-11 T 23-10-2018 CDG62_04675 af4325b8c51262727a3ea8c07b8fe5cf 526 SUPERFAMILY SSF52540 10 382 9.35E-52 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_06205 4c4fe16774973ae47b522a716266c812 231 Gene3D G3DSA:1.20.120.530 74 214 1.1E-8 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG62_06205 4c4fe16774973ae47b522a716266c812 231 Pfam PF07729 FCD domain 82 202 2.1E-7 T 23-10-2018 IPR011711 GntR, C-terminal CDG62_06205 4c4fe16774973ae47b522a716266c812 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 2.0E-13 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_06205 4c4fe16774973ae47b522a716266c812 231 SUPERFAMILY SSF46785 2 75 4.8E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_06205 4c4fe16774973ae47b522a716266c812 231 Gene3D G3DSA:1.10.10.10 1 72 2.2E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_06205 4c4fe16774973ae47b522a716266c812 231 SMART SM00345 13 71 4.8E-12 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_14690 4eb3506d876417a0789b3a9a0d6b12bc 247 Gene3D G3DSA:3.40.50.300 5 247 9.6E-74 T 23-10-2018 CDG62_14690 4eb3506d876417a0789b3a9a0d6b12bc 247 SMART SM00382 32 219 8.4E-15 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_14690 4eb3506d876417a0789b3a9a0d6b12bc 247 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_14690 4eb3506d876417a0789b3a9a0d6b12bc 247 SUPERFAMILY SSF52540 7 241 4.5E-74 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_14690 4eb3506d876417a0789b3a9a0d6b12bc 247 Pfam PF00005 ABC transporter 24 171 8.0E-33 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_14690 4eb3506d876417a0789b3a9a0d6b12bc 247 PIRSF PIRSF039085 4 247 2.2E-100 T 23-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CDG62_06425 0bce1115fedc13a098b53dd46f78d644 427 PIRSF PIRSF000355 78 427 8.8E-139 T 23-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG62_06425 0bce1115fedc13a098b53dd46f78d644 427 Gene3D G3DSA:1.10.620.20 85 421 4.5E-110 T 23-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 CDG62_06425 0bce1115fedc13a098b53dd46f78d644 427 SUPERFAMILY SSF47240 75 401 1.89E-96 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG62_06425 0bce1115fedc13a098b53dd46f78d644 427 Pfam PF00268 Ribonucleotide reductase, small chain 108 395 2.0E-85 T 23-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG62_04775 b24f9ce39f1149e932c2c8d601b47efe 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 116 9.3E-41 T 23-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04775 b24f9ce39f1149e932c2c8d601b47efe 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 116 25.832 T 23-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04775 b24f9ce39f1149e932c2c8d601b47efe 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 116 3.0E-39 T 23-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04775 b24f9ce39f1149e932c2c8d601b47efe 116 SUPERFAMILY SSF53137 4 114 3.49E-50 T 23-10-2018 CDG62_04775 b24f9ce39f1149e932c2c8d601b47efe 116 Gene3D G3DSA:3.30.420.100 2 116 2.8E-40 T 23-10-2018 CDG62_03190 4b815cf1fe7fbb9bf78dc3308d462b28 120 Gene3D G3DSA:3.30.428.10 1 118 1.6E-24 T 23-10-2018 IPR036265 HIT-like superfamily CDG62_03190 4b815cf1fe7fbb9bf78dc3308d462b28 120 Pfam PF01230 HIT domain 24 105 1.9E-13 T 23-10-2018 IPR001310 Histidine triad (HIT) protein CDG62_03190 4b815cf1fe7fbb9bf78dc3308d462b28 120 SUPERFAMILY SSF54197 5 116 1.7E-25 T 23-10-2018 IPR036265 HIT-like superfamily CDG62_14760 80cda922b743f50e6ad173764e2b824e 303 Pfam PF00348 Polyprenyl synthetase 36 272 1.8E-54 T 23-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 CDG62_14760 80cda922b743f50e6ad173764e2b824e 303 Gene3D G3DSA:1.10.600.10 3 303 1.1E-82 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily CDG62_14760 80cda922b743f50e6ad173764e2b824e 303 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 221 233 - T 23-10-2018 IPR033749 Polyprenyl synthetase, conserved site CDG62_14760 80cda922b743f50e6ad173764e2b824e 303 SUPERFAMILY SSF48576 12 287 1.79E-75 T 23-10-2018 IPR008949 Isoprenoid synthase domain superfamily CDG62_12805 79cabd784e45ad7107510f7912007de5 144 SUPERFAMILY SSF54637 6 140 2.66E-33 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_12805 79cabd784e45ad7107510f7912007de5 144 Gene3D G3DSA:3.10.129.10 7 144 5.8E-35 T 23-10-2018 CDG62_12805 79cabd784e45ad7107510f7912007de5 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 31 140 2.8E-20 T 23-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CDG62_12805 79cabd784e45ad7107510f7912007de5 144 Pfam PF03061 Thioesterase superfamily 56 132 1.5E-8 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDG62_15310 519642d8a030d3abd7baa82ecf1b2d83 153 Gene3D G3DSA:1.10.10.10 1 55 1.8E-14 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15310 519642d8a030d3abd7baa82ecf1b2d83 153 Pfam PF13404 AsnC-type helix-turn-helix domain 3 44 2.9E-13 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_15310 519642d8a030d3abd7baa82ecf1b2d83 153 SUPERFAMILY SSF46785 2 62 5.45E-14 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_15310 519642d8a030d3abd7baa82ecf1b2d83 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.3E-6 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_15310 519642d8a030d3abd7baa82ecf1b2d83 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.3E-6 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_15310 519642d8a030d3abd7baa82ecf1b2d83 153 SUPERFAMILY SSF54909 65 145 2.68E-14 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_15310 519642d8a030d3abd7baa82ecf1b2d83 153 SMART SM00344 3 111 8.8E-29 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG62_15310 519642d8a030d3abd7baa82ecf1b2d83 153 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 7.0E-15 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG62_15310 519642d8a030d3abd7baa82ecf1b2d83 153 Gene3D G3DSA:3.30.70.920 56 148 1.1E-18 T 23-10-2018 CDG62_11705 0902d6be42b2443fb6d22f63c04d3f9b 214 SMART SM01006 24 71 1.6E-13 T 23-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain CDG62_11705 0902d6be42b2443fb6d22f63c04d3f9b 214 Gene3D G3DSA:3.40.630.30 6 185 2.1E-41 T 23-10-2018 CDG62_11705 0902d6be42b2443fb6d22f63c04d3f9b 214 Pfam PF13523 Acetyltransferase (GNAT) domain 29 169 2.8E-35 T 23-10-2018 CDG62_11705 0902d6be42b2443fb6d22f63c04d3f9b 214 SUPERFAMILY SSF55729 19 183 4.88E-38 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_12360 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 7 22 - T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_12360 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 41 54 - T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_12360 11a14165b9f48e49cb97408b9e6b17f1 271 Pfam PF00809 Pterin binding enzyme 8 249 3.6E-71 T 23-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_12360 11a14165b9f48e49cb97408b9e6b17f1 271 SUPERFAMILY SSF51717 3 266 2.22E-72 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_12360 11a14165b9f48e49cb97408b9e6b17f1 271 Gene3D G3DSA:3.20.20.20 1 270 1.5E-75 T 23-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CDG62_12360 11a14165b9f48e49cb97408b9e6b17f1 271 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 7 263 7.8E-75 T 23-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CDG62_06355 d847692b34c632fb0fa5e9d7edc7e990 205 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 199 9.9E-57 T 23-10-2018 IPR006070 YrdC-like domain GO:0003725 CDG62_06355 d847692b34c632fb0fa5e9d7edc7e990 205 Gene3D G3DSA:3.90.870.10 2 205 2.0E-58 T 23-10-2018 CDG62_06355 d847692b34c632fb0fa5e9d7edc7e990 205 SUPERFAMILY SSF55821 4 203 5.19E-56 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDG62_06355 d847692b34c632fb0fa5e9d7edc7e990 205 Pfam PF01300 Telomere recombination 22 197 4.1E-41 T 23-10-2018 IPR006070 YrdC-like domain GO:0003725 CDG62_10995 4c4cec50f3b297115ce95372dd89f46b 289 Gene3D G3DSA:3.60.15.10 1 289 8.2E-100 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_10995 4c4cec50f3b297115ce95372dd89f46b 289 SMART SM00849 16 206 7.6E-22 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_10995 4c4cec50f3b297115ce95372dd89f46b 289 SUPERFAMILY SSF56281 13 260 3.52E-44 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_10995 4c4cec50f3b297115ce95372dd89f46b 289 Pfam PF00753 Metallo-beta-lactamase superfamily 14 206 8.6E-21 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_10420 ec3903e8349a8365acc9bca38ffd33e7 169 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 115 128 4.1E-15 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG62_10420 ec3903e8349a8365acc9bca38ffd33e7 169 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 9 26 4.1E-15 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG62_10420 ec3903e8349a8365acc9bca38ffd33e7 169 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 134 149 4.1E-15 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG62_10420 ec3903e8349a8365acc9bca38ffd33e7 169 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 9 160 1.1E-35 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CDG62_10420 ec3903e8349a8365acc9bca38ffd33e7 169 SMART SM00226 7 162 9.0E-41 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CDG62_10420 ec3903e8349a8365acc9bca38ffd33e7 169 Gene3D G3DSA:3.40.50.2300 7 168 1.1E-49 T 23-10-2018 CDG62_10420 ec3903e8349a8365acc9bca38ffd33e7 169 SUPERFAMILY SSF52788 5 161 1.57E-45 T 23-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily CDG62_05030 149001c2f3a26214bb1a5670fc071c68 200 Gene3D G3DSA:2.60.120.620 11 198 1.6E-50 T 23-10-2018 CDG62_05030 149001c2f3a26214bb1a5670fc071c68 200 SUPERFAMILY SSF51197 13 196 1.65E-6 T 23-10-2018 CDG62_05030 149001c2f3a26214bb1a5670fc071c68 200 SMART SM00702 22 194 5.2E-18 T 23-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 CDG62_05030 149001c2f3a26214bb1a5670fc071c68 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 106 194 1.9E-22 T 23-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CDG62_15330 747924b09ff0a2e83cc2c62598fae575 111 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 109 8.0E-13 T 23-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like CDG62_15330 747924b09ff0a2e83cc2c62598fae575 111 SUPERFAMILY SSF110857 2 109 3.4E-20 T 23-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily CDG62_15330 747924b09ff0a2e83cc2c62598fae575 111 Gene3D G3DSA:3.10.490.10 1 111 6.9E-19 T 23-10-2018 CDG62_10985 6fd8d4038a02833ade71f677140d5e0c 138 Pfam PF04143 Sulphur transport 10 125 4.5E-7 T 23-10-2018 IPR007272 Sulphur transport domain CDG62_07770 ec008bc255827df4b0d6c03a87c321ac 259 SUPERFAMILY SSF52343 102 257 7.99E-36 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_07770 ec008bc255827df4b0d6c03a87c321ac 259 SUPERFAMILY SSF63380 7 99 9.14E-26 T 23-10-2018 IPR017938 Riboflavin synthase-like beta-barrel CDG62_07770 ec008bc255827df4b0d6c03a87c321ac 259 Pfam PF00970 Oxidoreductase FAD-binding domain 15 98 1.5E-10 T 23-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 CDG62_07770 ec008bc255827df4b0d6c03a87c321ac 259 Gene3D G3DSA:3.40.50.80 100 255 4.7E-37 T 23-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CDG62_07770 ec008bc255827df4b0d6c03a87c321ac 259 Gene3D G3DSA:2.40.30.10 1 96 2.8E-29 T 23-10-2018 CDG62_07770 ec008bc255827df4b0d6c03a87c321ac 259 Pfam PF00175 Oxidoreductase NAD-binding domain 112 229 2.6E-5 T 23-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CDG62_18950 32da90fcdc33c46425eff4a43e123979 230 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 27 130 1.5E-27 T 23-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CDG62_18950 32da90fcdc33c46425eff4a43e123979 230 SUPERFAMILY SSF54534 29 228 7.07E-57 T 23-10-2018 CDG62_18950 32da90fcdc33c46425eff4a43e123979 230 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 137 225 4.5E-28 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG62_18950 32da90fcdc33c46425eff4a43e123979 230 Gene3D G3DSA:3.10.50.40 90 230 3.6E-52 T 23-10-2018 CDG62_18950 32da90fcdc33c46425eff4a43e123979 230 Gene3D G3DSA:1.10.287.460 26 86 2.9E-12 T 23-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 CDG62_16695 c3bff481c9e9f51a3589b499b3689320 340 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 14 317 3.7E-140 T 23-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CDG62_16695 c3bff481c9e9f51a3589b499b3689320 340 Pfam PF01207 Dihydrouridine synthase (Dus) 17 324 9.6E-87 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG62_16695 c3bff481c9e9f51a3589b499b3689320 340 Gene3D G3DSA:3.20.20.70 10 251 3.9E-72 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_16695 c3bff481c9e9f51a3589b499b3689320 340 Gene3D G3DSA:1.20.120.1460 254 328 6.6E-17 T 23-10-2018 CDG62_16695 c3bff481c9e9f51a3589b499b3689320 340 SUPERFAMILY SSF51395 13 322 1.27E-71 T 23-10-2018 CDG62_16695 c3bff481c9e9f51a3589b499b3689320 340 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 23-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG62_16695 c3bff481c9e9f51a3589b499b3689320 340 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 9 331 49.234 T 23-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CDG62_16695 c3bff481c9e9f51a3589b499b3689320 340 PIRSF PIRSF006621 3 333 4.3E-77 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG62_16065 34e0e79c002ac1b51772c982c77109ba 228 Gene3D G3DSA:3.20.20.70 6 223 7.8E-83 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_16065 34e0e79c002ac1b51772c982c77109ba 228 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 217 6.8E-97 T 23-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDG62_16065 34e0e79c002ac1b51772c982c77109ba 228 PIRSF PIRSF001461 1 228 4.9E-102 T 23-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDG62_16065 34e0e79c002ac1b51772c982c77109ba 228 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 137 159 - T 23-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDG62_16065 34e0e79c002ac1b51772c982c77109ba 228 SUPERFAMILY SSF51366 4 219 9.42E-76 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG62_16065 34e0e79c002ac1b51772c982c77109ba 228 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 204 3.0E-88 T 23-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDG62_16065 34e0e79c002ac1b51772c982c77109ba 228 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 23-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CDG62_18345 c37dff408c77e8d8ca00980ec789d9d4 464 Gene3D G3DSA:1.20.1250.20 261 464 2.3E-17 T 23-10-2018 CDG62_18345 c37dff408c77e8d8ca00980ec789d9d4 464 Gene3D G3DSA:1.20.1720.10 16 216 8.3E-45 T 23-10-2018 CDG62_18345 c37dff408c77e8d8ca00980ec789d9d4 464 SUPERFAMILY SSF103473 8 461 3.01E-63 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_18345 c37dff408c77e8d8ca00980ec789d9d4 464 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 421 7.1E-78 T 23-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CDG62_18345 c37dff408c77e8d8ca00980ec789d9d4 464 Pfam PF07690 Major Facilitator Superfamily 22 412 9.2E-46 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_18345 c37dff408c77e8d8ca00980ec789d9d4 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 3.1E-7 T 23-10-2018 CDG62_18345 c37dff408c77e8d8ca00980ec789d9d4 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 3.1E-7 T 23-10-2018 CDG62_18345 c37dff408c77e8d8ca00980ec789d9d4 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 3.1E-7 T 23-10-2018 CDG62_18345 c37dff408c77e8d8ca00980ec789d9d4 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 3.1E-7 T 23-10-2018 CDG62_18345 c37dff408c77e8d8ca00980ec789d9d4 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 206 224 3.1E-7 T 23-10-2018 CDG62_12605 aab41214867c432e7cb5af6c8c2f83b0 708 SMART SM00052 457 703 3.2E-7 T 23-10-2018 IPR001633 EAL domain CDG62_12605 aab41214867c432e7cb5af6c8c2f83b0 708 SUPERFAMILY SSF55785 145 227 1.92E-8 T 23-10-2018 IPR035965 PAS domain superfamily CDG62_12605 aab41214867c432e7cb5af6c8c2f83b0 708 Pfam PF00563 EAL domain 464 697 2.4E-23 T 23-10-2018 IPR001633 EAL domain CDG62_12605 aab41214867c432e7cb5af6c8c2f83b0 708 SMART SM00091 157 223 8.4E-4 T 23-10-2018 IPR000014 PAS domain CDG62_12605 aab41214867c432e7cb5af6c8c2f83b0 708 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 225 8.8E-6 T 23-10-2018 IPR000014 PAS domain CDG62_12605 aab41214867c432e7cb5af6c8c2f83b0 708 Gene3D G3DSA:3.20.20.450 459 702 1.6E-26 T 23-10-2018 IPR035919 EAL domain superfamily CDG62_12605 aab41214867c432e7cb5af6c8c2f83b0 708 Gene3D G3DSA:3.30.450.20 143 257 5.1E-9 T 23-10-2018 CDG62_12605 aab41214867c432e7cb5af6c8c2f83b0 708 SUPERFAMILY SSF141868 463 697 3.66E-25 T 23-10-2018 IPR035919 EAL domain superfamily CDG62_12605 aab41214867c432e7cb5af6c8c2f83b0 708 SUPERFAMILY SSF52172 19 160 9.36E-7 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_02760 e3fa9a5548e7f066c401108e106594cf 104 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 41 96 3.1E-21 T 23-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system CDG62_03730 374f022175e9d6292c68a37ac4770d97 655 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 496 4.0E-189 T 23-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 CDG62_03730 374f022175e9d6292c68a37ac4770d97 655 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 497 6.5E-161 T 23-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 CDG62_03730 374f022175e9d6292c68a37ac4770d97 655 ProSitePatterns PS01303 BCCT family of transporters signature. 316 325 - T 23-10-2018 IPR018093 BCCT transporter, conserved site CDG62_12170 24d52306d8d74b82ace198bd3b0f0e67 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_12170 24d52306d8d74b82ace198bd3b0f0e67 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_12170 24d52306d8d74b82ace198bd3b0f0e67 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-5 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_12170 24d52306d8d74b82ace198bd3b0f0e67 294 SUPERFAMILY SSF46785 3 85 1.14E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_12170 24d52306d8d74b82ace198bd3b0f0e67 294 Gene3D G3DSA:3.40.190.10 166 272 8.0E-48 T 23-10-2018 CDG62_12170 24d52306d8d74b82ace198bd3b0f0e67 294 SUPERFAMILY SSF53850 89 291 8.57E-30 T 23-10-2018 CDG62_12170 24d52306d8d74b82ace198bd3b0f0e67 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.0E-17 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_12170 24d52306d8d74b82ace198bd3b0f0e67 294 Gene3D G3DSA:1.10.10.10 2 93 1.5E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_12170 24d52306d8d74b82ace198bd3b0f0e67 294 Pfam PF03466 LysR substrate binding domain 89 280 3.0E-34 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_12170 24d52306d8d74b82ace198bd3b0f0e67 294 Gene3D G3DSA:3.40.190.10 95 291 8.0E-48 T 23-10-2018 CDG62_10530 a17da321fe7e8cf6011dddc3b25fdd77 153 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 132 2.6E-7 T 23-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like CDG62_10530 a17da321fe7e8cf6011dddc3b25fdd77 153 SUPERFAMILY SSF55961 2 132 6.11E-15 T 23-10-2018 CDG62_10530 a17da321fe7e8cf6011dddc3b25fdd77 153 Gene3D G3DSA:3.30.530.20 4 140 1.1E-19 T 23-10-2018 IPR023393 START-like domain superfamily CDG62_13140 57ca42a9b8aee5ef70b6b64611d39959 209 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 186 5.3E-69 T 23-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CDG62_13140 57ca42a9b8aee5ef70b6b64611d39959 209 Pfam PF00551 Formyl transferase 3 178 7.0E-58 T 23-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG62_13140 57ca42a9b8aee5ef70b6b64611d39959 209 SUPERFAMILY SSF53328 3 200 1.15E-61 T 23-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG62_13140 57ca42a9b8aee5ef70b6b64611d39959 209 Gene3D G3DSA:3.40.50.170 1 206 4.9E-75 T 23-10-2018 CDG62_13140 57ca42a9b8aee5ef70b6b64611d39959 209 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 130 153 - T 23-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CDG62_13140 57ca42a9b8aee5ef70b6b64611d39959 209 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 184 29.63 T 23-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CDG62_04985 a1fb10a35e0e9d5de03b6375790e1136 159 SUPERFAMILY SSF55486 18 156 1.93E-42 T 23-10-2018 CDG62_04985 a1fb10a35e0e9d5de03b6375790e1136 159 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 41 151 5.4E-34 T 23-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CDG62_04985 a1fb10a35e0e9d5de03b6375790e1136 159 Pfam PF02130 Uncharacterized protein family UPF0054 21 150 7.6E-35 T 23-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CDG62_04985 a1fb10a35e0e9d5de03b6375790e1136 159 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 154 22.485 T 23-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CDG62_04985 a1fb10a35e0e9d5de03b6375790e1136 159 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 119 129 - T 23-10-2018 IPR020549 Endoribonuclease YbeY, conserved site CDG62_04985 a1fb10a35e0e9d5de03b6375790e1136 159 Gene3D G3DSA:3.40.390.30 2 159 1.2E-45 T 23-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 CDG62_03680 da5d6927857a264b03a0fda83fb311b8 277 Pfam PF00106 short chain dehydrogenase 7 199 2.4E-40 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03680 da5d6927857a264b03a0fda83fb311b8 277 SUPERFAMILY SSF51735 6 263 7.94E-46 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_03680 da5d6927857a264b03a0fda83fb311b8 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.1E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03680 da5d6927857a264b03a0fda83fb311b8 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.1E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03680 da5d6927857a264b03a0fda83fb311b8 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.1E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03680 da5d6927857a264b03a0fda83fb311b8 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03680 da5d6927857a264b03a0fda83fb311b8 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.1E-16 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03680 da5d6927857a264b03a0fda83fb311b8 277 Gene3D G3DSA:3.40.50.720 3 246 3.3E-44 T 23-10-2018 CDG62_12980 fd6a9ae9b5e95ae9f2065e56b0f2b58a 198 SMART SM00867 37 196 3.1E-35 T 23-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDG62_12980 fd6a9ae9b5e95ae9f2065e56b0f2b58a 198 SUPERFAMILY SSF101874 35 195 6.02E-37 T 23-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDG62_12980 fd6a9ae9b5e95ae9f2065e56b0f2b58a 198 Pfam PF04264 YceI-like domain 39 193 2.5E-29 T 23-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDG62_12980 fd6a9ae9b5e95ae9f2065e56b0f2b58a 198 Gene3D G3DSA:2.40.128.110 36 195 2.3E-36 T 23-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CDG62_03665 b64764f0e88190c2fa3a16823288cce6 402 Pfam PF01266 FAD dependent oxidoreductase 5 395 1.9E-62 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDG62_03665 b64764f0e88190c2fa3a16823288cce6 402 SUPERFAMILY SSF51905 4 399 2.68E-40 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_09545 0fb88515cacb1c4d5418461c711c4634 315 Pfam PF13730 Helix-turn-helix domain 22 74 4.2E-9 T 23-10-2018 CDG62_09545 0fb88515cacb1c4d5418461c711c4634 315 Gene3D G3DSA:1.10.10.10 12 115 3.3E-8 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_09545 0fb88515cacb1c4d5418461c711c4634 315 SUPERFAMILY SSF46785 22 85 2.18E-5 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_16910 f375ea41b7176fa88669aca8867022c1 259 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 24 241 6.9E-63 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDG62_16910 f375ea41b7176fa88669aca8867022c1 259 Pfam PF00902 Sec-independent protein translocase protein (TatC) 26 236 4.7E-58 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDG62_16910 f375ea41b7176fa88669aca8867022c1 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 169 197 2.4E-37 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDG62_16910 f375ea41b7176fa88669aca8867022c1 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 100 118 2.4E-37 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDG62_16910 f375ea41b7176fa88669aca8867022c1 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 23 50 2.4E-37 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDG62_16910 f375ea41b7176fa88669aca8867022c1 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 118 144 2.4E-37 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDG62_16910 f375ea41b7176fa88669aca8867022c1 259 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 13 253 15.266 T 23-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CDG62_13435 8f1f2c8db6ec7504676f9261caa880cc 420 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 245 410 1.3E-51 T 23-10-2018 IPR000160 GGDEF domain CDG62_13435 8f1f2c8db6ec7504676f9261caa880cc 420 SMART SM00267 236 411 3.5E-53 T 23-10-2018 IPR000160 GGDEF domain CDG62_13435 8f1f2c8db6ec7504676f9261caa880cc 420 Gene3D G3DSA:3.30.70.270 236 411 8.2E-53 T 23-10-2018 CDG62_13435 8f1f2c8db6ec7504676f9261caa880cc 420 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 407 2.9E-47 T 23-10-2018 IPR000160 GGDEF domain CDG62_13435 8f1f2c8db6ec7504676f9261caa880cc 420 SUPERFAMILY SSF55073 252 410 4.94E-47 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_13555 6779db0c59e734b07ff9bf17a782d6a1 227 Pfam PF04972 BON domain 61 113 5.1E-12 T 23-10-2018 IPR007055 BON domain CDG62_18585 f4e379c4b027ce3b5b7161827caae795 1101 Gene3D G3DSA:3.55.50.10 111 221 2.6E-44 T 23-10-2018 CDG62_18585 f4e379c4b027ce3b5b7161827caae795 1101 Pfam PF05954 Phage late control gene D protein (GPD) 43 383 1.3E-59 T 23-10-2018 CDG62_18585 f4e379c4b027ce3b5b7161827caae795 1101 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 557 664 8.2E-36 T 23-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain CDG62_18585 f4e379c4b027ce3b5b7161827caae795 1101 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 25 583 9.7E-69 T 23-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CDG62_18585 f4e379c4b027ce3b5b7161827caae795 1101 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 35 584 3.9E-54 T 23-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CDG62_18585 f4e379c4b027ce3b5b7161827caae795 1101 Gene3D G3DSA:2.40.50.230 426 534 7.7E-30 T 23-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily CDG62_18585 f4e379c4b027ce3b5b7161827caae795 1101 SUPERFAMILY SSF69279 24 199 2.21E-37 T 23-10-2018 CDG62_18585 f4e379c4b027ce3b5b7161827caae795 1101 Gene3D G3DSA:3.30.1920.30 254 335 2.6E-44 T 23-10-2018 CDG62_18585 f4e379c4b027ce3b5b7161827caae795 1101 SUPERFAMILY SSF69255 435 528 3.14E-23 T 23-10-2018 CDG62_18585 f4e379c4b027ce3b5b7161827caae795 1101 Gene3D G3DSA:2.30.110.50 31 375 2.6E-44 T 23-10-2018 CDG62_18585 f4e379c4b027ce3b5b7161827caae795 1101 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 845 994 6.4E-46 T 23-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CDG62_03795 9119603729e236489324ffbc8da3b9ca 432 SUPERFAMILY SSF118215 6 404 2.09E-110 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG62_03795 9119603729e236489324ffbc8da3b9ca 432 Gene3D G3DSA:1.10.3860.10 1 417 1.3E-117 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG62_03795 9119603729e236489324ffbc8da3b9ca 432 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 5.3E-37 T 23-10-2018 CDG62_03795 9119603729e236489324ffbc8da3b9ca 432 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 5.3E-37 T 23-10-2018 CDG62_03795 9119603729e236489324ffbc8da3b9ca 432 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 5.3E-37 T 23-10-2018 CDG62_03795 9119603729e236489324ffbc8da3b9ca 432 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 5.3E-37 T 23-10-2018 CDG62_03795 9119603729e236489324ffbc8da3b9ca 432 PRINTS PR00173 Glutamate-aspartate symporter signature 80 105 5.3E-37 T 23-10-2018 CDG62_03795 9119603729e236489324ffbc8da3b9ca 432 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 5.3E-37 T 23-10-2018 CDG62_03795 9119603729e236489324ffbc8da3b9ca 432 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 5.3E-37 T 23-10-2018 CDG62_03795 9119603729e236489324ffbc8da3b9ca 432 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 5.3E-37 T 23-10-2018 CDG62_03795 9119603729e236489324ffbc8da3b9ca 432 Pfam PF00375 Sodium:dicarboxylate symporter family 6 403 3.5E-104 T 23-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CDG62_13365 260b856a24be521eade9ee2e1c24838c 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.9E-13 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_13365 260b856a24be521eade9ee2e1c24838c 293 Pfam PF03466 LysR substrate binding domain 85 284 4.2E-29 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_13365 260b856a24be521eade9ee2e1c24838c 293 Gene3D G3DSA:3.40.190.290 88 283 7.2E-30 T 23-10-2018 CDG62_13365 260b856a24be521eade9ee2e1c24838c 293 Gene3D G3DSA:1.10.10.10 4 85 7.3E-16 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_13365 260b856a24be521eade9ee2e1c24838c 293 SUPERFAMILY SSF53850 85 284 1.99E-32 T 23-10-2018 CDG62_13365 260b856a24be521eade9ee2e1c24838c 293 SUPERFAMILY SSF46785 3 109 4.41E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00270 9c6c8dde57bf0f732d6bd8556672213b 314 Gene3D G3DSA:3.40.140.10 164 295 7.3E-8 T 23-10-2018 CDG62_00270 9c6c8dde57bf0f732d6bd8556672213b 314 SUPERFAMILY SSF53927 217 301 1.87E-7 T 23-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CDG62_15760 6300e4f92b60e76f08e8f049e77e862c 369 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 3 350 1.4E-78 T 23-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 CDG62_15760 6300e4f92b60e76f08e8f049e77e862c 369 Pfam PF01266 FAD dependent oxidoreductase 2 347 1.5E-60 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDG62_15760 6300e4f92b60e76f08e8f049e77e862c 369 Gene3D G3DSA:3.30.9.10 88 307 2.2E-79 T 23-10-2018 CDG62_15760 6300e4f92b60e76f08e8f049e77e862c 369 Gene3D G3DSA:3.50.50.60 4 347 2.2E-79 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_15760 6300e4f92b60e76f08e8f049e77e862c 369 SUPERFAMILY SSF54373 221 306 3.27E-20 T 23-10-2018 CDG62_15760 6300e4f92b60e76f08e8f049e77e862c 369 SUPERFAMILY SSF51905 1 365 4.66E-45 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_07405 30b28b49e3552473886ec140a1ead00e 467 Pfam PF00324 Amino acid permease 23 465 2.4E-103 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG62_07405 30b28b49e3552473886ec140a1ead00e 467 Gene3D G3DSA:1.20.1740.10 14 467 4.7E-61 T 23-10-2018 CDG62_07405 30b28b49e3552473886ec140a1ead00e 467 PIRSF PIRSF006060 1 467 9.4E-70 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_07405 30b28b49e3552473886ec140a1ead00e 467 ProSitePatterns PS00218 Amino acid permeases signature. 48 78 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG62_17010 e84a032843a8190e476bdc27f7ee402c 571 SUPERFAMILY SSF51735 426 562 1.07E-22 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_17010 e84a032843a8190e476bdc27f7ee402c 571 Gene3D G3DSA:1.20.1530.20 4 400 3.4E-77 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG62_17010 e84a032843a8190e476bdc27f7ee402c 571 Pfam PF00999 Sodium/hydrogen exchanger family 13 388 8.0E-72 T 23-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CDG62_17010 e84a032843a8190e476bdc27f7ee402c 571 Pfam PF02254 TrkA-N domain 430 539 1.8E-18 T 23-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CDG62_17010 e84a032843a8190e476bdc27f7ee402c 571 Gene3D G3DSA:3.40.50.720 423 566 5.1E-26 T 23-10-2018 CDG62_15090 d60bbd585da4b1224e99be2d0db75437 128 Gene3D G3DSA:1.20.1290.10 3 127 5.7E-37 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDG62_15090 d60bbd585da4b1224e99be2d0db75437 128 SUPERFAMILY SSF69118 4 123 5.37E-34 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDG62_15090 d60bbd585da4b1224e99be2d0db75437 128 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 7.1E-22 T 23-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDG62_04575 2af727b496b45c7ff181638b6a0759e7 259 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 4 257 3.0E-84 T 23-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CDG62_04575 2af727b496b45c7ff181638b6a0759e7 259 Pfam PF02405 Permease MlaE 41 253 8.0E-70 T 23-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 Gene3D G3DSA:3.40.50.720 1 244 1.8E-81 T 23-10-2018 CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 7.0E-66 T 23-10-2018 CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 2.1E-94 T 23-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.2E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 4.2E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.2E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 1.4E-5 T 23-10-2018 CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 5.8E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 5.8E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 5.8E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 5.8E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.8E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.8E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_06380 626ba869edc07c5d3358bb1945e184c9 244 SUPERFAMILY SSF51735 5 243 1.81E-83 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_15965 b06b17f3f6e21d6f312163ef97d9c443 485 Pfam PF12787 EcsC protein family 101 315 6.5E-21 T 23-10-2018 IPR024787 EcsC protein CDG62_14125 3b83012b777e671a5b7ac406567009ac 312 Gene3D G3DSA:3.40.50.1820 24 311 4.5E-55 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_14125 3b83012b777e671a5b7ac406567009ac 312 Pfam PF00561 alpha/beta hydrolase fold 40 294 8.6E-23 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_14125 3b83012b777e671a5b7ac406567009ac 312 SUPERFAMILY SSF53474 6 309 1.8E-56 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_14790 b394f6afd08d4c8712d6c93a9dea504f 408 Gene3D G3DSA:3.40.640.10 60 301 3.3E-147 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_14790 b394f6afd08d4c8712d6c93a9dea504f 408 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 23-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CDG62_14790 b394f6afd08d4c8712d6c93a9dea504f 408 Gene3D G3DSA:3.90.1150.10 11 392 3.3E-147 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_14790 b394f6afd08d4c8712d6c93a9dea504f 408 SUPERFAMILY SSF53383 1 398 1.05E-113 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_14790 b394f6afd08d4c8712d6c93a9dea504f 408 PRINTS PR00799 Aspartate aminotransferase signature 274 299 5.3E-34 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDG62_14790 b394f6afd08d4c8712d6c93a9dea504f 408 PRINTS PR00799 Aspartate aminotransferase signature 342 360 5.3E-34 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDG62_14790 b394f6afd08d4c8712d6c93a9dea504f 408 PRINTS PR00799 Aspartate aminotransferase signature 207 219 5.3E-34 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDG62_14790 b394f6afd08d4c8712d6c93a9dea504f 408 PRINTS PR00799 Aspartate aminotransferase signature 176 195 5.3E-34 T 23-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CDG62_14790 b394f6afd08d4c8712d6c93a9dea504f 408 Pfam PF00155 Aminotransferase class I and II 27 392 1.2E-78 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG62_15325 29cc6c20dc7362d0d023b352663f0709 417 Gene3D G3DSA:1.20.1250.20 26 409 8.8E-49 T 23-10-2018 CDG62_15325 29cc6c20dc7362d0d023b352663f0709 417 Pfam PF07690 Major Facilitator Superfamily 263 407 1.8E-12 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_15325 29cc6c20dc7362d0d023b352663f0709 417 Pfam PF07690 Major Facilitator Superfamily 36 258 1.0E-24 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_15325 29cc6c20dc7362d0d023b352663f0709 417 SUPERFAMILY SSF103473 27 409 7.72E-55 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_11285 d312ac89f6baf5176ff973f557b8e21c 297 Gene3D G3DSA:1.10.10.10 1 83 6.9E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_11285 d312ac89f6baf5176ff973f557b8e21c 297 Pfam PF03466 LysR substrate binding domain 93 293 2.6E-19 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_11285 d312ac89f6baf5176ff973f557b8e21c 297 Gene3D G3DSA:3.40.190.10 168 266 2.4E-56 T 23-10-2018 CDG62_11285 d312ac89f6baf5176ff973f557b8e21c 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 62 2.3E-10 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_11285 d312ac89f6baf5176ff973f557b8e21c 297 SUPERFAMILY SSF53850 88 293 6.7E-38 T 23-10-2018 CDG62_11285 d312ac89f6baf5176ff973f557b8e21c 297 Gene3D G3DSA:3.40.190.10 88 290 2.4E-56 T 23-10-2018 CDG62_11285 d312ac89f6baf5176ff973f557b8e21c 297 SUPERFAMILY SSF46785 4 79 8.16E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_15085 3dfff5ce207cb1ae0924b963b942dcca 215 SMART SM00882 6 202 2.0E-75 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_15085 3dfff5ce207cb1ae0924b963b942dcca 215 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 23-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 CDG62_15085 3dfff5ce207cb1ae0924b963b942dcca 215 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 208 7.3E-97 T 23-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CDG62_15085 3dfff5ce207cb1ae0924b963b942dcca 215 Gene3D G3DSA:3.40.1080.10 2 213 3.3E-101 T 23-10-2018 CDG62_15085 3dfff5ce207cb1ae0924b963b942dcca 215 Pfam PF01144 Coenzyme A transferase 7 200 2.4E-41 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_15085 3dfff5ce207cb1ae0924b963b942dcca 215 SUPERFAMILY SSF100950 3 211 1.03E-72 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 Gene3D G3DSA:3.90.960.10 240 393 8.9E-232 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 Gene3D G3DSA:3.30.930.10 11 469 8.9E-232 T 23-10-2018 CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 PIRSF PIRSF001535 1 572 4.1E-257 T 23-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 Gene3D G3DSA:3.40.50.800 4 558 8.9E-232 T 23-10-2018 IPR036621 Anticodon-binding domain superfamily CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 SUPERFAMILY SSF55681 10 482 1.74E-103 T 23-10-2018 CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.5E-18 T 23-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.5E-18 T 23-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.5E-18 T 23-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.5E-18 T 23-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 463 3.0E-45 T 23-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 Pfam PF03129 Anticodon binding domain 479 571 9.3E-19 T 23-10-2018 IPR004154 Anticodon-binding CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 571 4.4E-247 T 23-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 572 40.772 T 23-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 SUPERFAMILY SSF52954 467 571 1.96E-30 T 23-10-2018 CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 SUPERFAMILY SSF55826 218 394 4.45E-24 T 23-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 CDG62_14520 c5ba8bc90422364c7c93cb48235bfb4c 572 Pfam PF04073 Aminoacyl-tRNA editing domain 256 380 2.1E-19 T 23-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CDG62_13615 9bb539962f21767eb6ea8079b7bfb86f 384 SUPERFAMILY SSF56634 75 372 1.44E-54 T 23-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG62_13615 9bb539962f21767eb6ea8079b7bfb86f 384 Gene3D G3DSA:1.20.1280.120 73 361 1.2E-26 T 23-10-2018 CDG62_13615 9bb539962f21767eb6ea8079b7bfb86f 384 Pfam PF00199 Catalase 80 187 2.0E-7 T 23-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 CDG62_13615 9bb539962f21767eb6ea8079b7bfb86f 384 Gene3D G3DSA:2.40.180.20 90 350 1.2E-26 T 23-10-2018 CDG62_13100 92c78e3565de9c2335d3aa5eb7c06204 204 Pfam PF04542 Sigma-70 region 2 45 95 1.2E-5 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDG62_13100 92c78e3565de9c2335d3aa5eb7c06204 204 Gene3D G3DSA:1.10.10.10 113 195 1.1E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_13100 92c78e3565de9c2335d3aa5eb7c06204 204 SUPERFAMILY SSF88659 105 194 2.99E-16 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDG62_13100 92c78e3565de9c2335d3aa5eb7c06204 204 Pfam PF08281 Sigma-70, region 4 136 185 1.0E-16 T 23-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG62_13100 92c78e3565de9c2335d3aa5eb7c06204 204 Gene3D G3DSA:1.10.1740.10 11 97 1.2E-5 T 23-10-2018 CDG62_13100 92c78e3565de9c2335d3aa5eb7c06204 204 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 192 1.7E-22 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDG62_13100 92c78e3565de9c2335d3aa5eb7c06204 204 SUPERFAMILY SSF88946 36 97 3.26E-8 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDG62_10915 ae19f875115f6da384d31e88b973049f 646 Gene3D G3DSA:3.40.50.1820 364 627 7.9E-27 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_10915 ae19f875115f6da384d31e88b973049f 646 SUPERFAMILY SSF53474 366 626 2.05E-23 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_10915 ae19f875115f6da384d31e88b973049f 646 Pfam PF05057 Putative serine esterase (DUF676) 369 518 1.4E-5 T 23-10-2018 IPR007751 Domain of unknown function DUF676, lipase-like CDG62_08645 c05253da0bd50e0aede6c82065423b30 516 Pfam PF14403 Circularly permuted ATP-grasp type 2 115 489 2.2E-146 T 23-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 CDG62_08645 c05253da0bd50e0aede6c82065423b30 516 Gene3D G3DSA:3.30.1490.270 385 445 4.6E-25 T 23-10-2018 CDG62_08645 c05253da0bd50e0aede6c82065423b30 516 Gene3D G3DSA:3.40.50.11290 250 348 4.8E-37 T 23-10-2018 CDG62_08645 c05253da0bd50e0aede6c82065423b30 516 PIRSF PIRSF005522 36 516 7.1E-213 T 23-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 CDG62_08645 c05253da0bd50e0aede6c82065423b30 516 SUPERFAMILY SSF56059 65 504 2.28E-54 T 23-10-2018 CDG62_13255 c02ca599596c1053594e93dd8c4125e7 238 SUPERFAMILY SSF75217 73 234 3.92E-47 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG62_13255 c02ca599596c1053594e93dd8c4125e7 238 Gene3D G3DSA:2.40.240.20 1 67 3.8E-23 T 23-10-2018 CDG62_13255 c02ca599596c1053594e93dd8c4125e7 238 Pfam PF04452 RNA methyltransferase 17 233 2.2E-69 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDG62_13255 c02ca599596c1053594e93dd8c4125e7 238 Gene3D G3DSA:3.40.1280.10 72 237 5.9E-52 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG62_13255 c02ca599596c1053594e93dd8c4125e7 238 SUPERFAMILY SSF88697 1 67 5.8E-18 T 23-10-2018 IPR015947 PUA-like superfamily CDG62_13255 c02ca599596c1053594e93dd8c4125e7 238 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 1 235 4.0E-63 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDG62_13255 c02ca599596c1053594e93dd8c4125e7 238 PIRSF PIRSF015601 1 237 2.1E-59 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDG62_03465 a70baa6504e971999a132d0fe394e1c8 188 Pfam PF02525 Flavodoxin-like fold 1 186 8.4E-45 T 23-10-2018 IPR003680 Flavodoxin-like fold CDG62_03465 a70baa6504e971999a132d0fe394e1c8 188 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 188 28.464 T 23-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CDG62_03465 a70baa6504e971999a132d0fe394e1c8 188 SUPERFAMILY SSF52218 1 188 5.97E-50 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_03465 a70baa6504e971999a132d0fe394e1c8 188 Gene3D G3DSA:3.40.50.360 1 188 1.7E-55 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_11710 40d7da36abb89384a6baf9aa5fb1f76b 611 Gene3D G3DSA:1.10.274.90 3 124 4.8E-16 T 23-10-2018 CDG62_11710 40d7da36abb89384a6baf9aa5fb1f76b 611 Pfam PF06276 Ferric iron reductase FhuF-like transporter 407 564 2.3E-34 T 23-10-2018 IPR022770 Ferric iron reductase FhuF domain CDG62_11710 40d7da36abb89384a6baf9aa5fb1f76b 611 Pfam PF04183 IucA / IucC family 139 385 5.0E-67 T 23-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 CDG62_11710 40d7da36abb89384a6baf9aa5fb1f76b 611 Gene3D G3DSA:1.10.510.40 374 576 5.7E-55 T 23-10-2018 CDG62_17770 b2c1da4bbaa386a95d3af407dd2c2096 210 Gene3D G3DSA:2.60.120.590 21 210 3.8E-53 T 23-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily CDG62_17770 b2c1da4bbaa386a95d3af407dd2c2096 210 SUPERFAMILY SSF51197 13 205 2.47E-51 T 23-10-2018 CDG62_17770 b2c1da4bbaa386a95d3af407dd2c2096 210 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 28 202 2.1E-25 T 23-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CDG62_09785 3692002750c695df7d649849a5bc9b57 216 SUPERFAMILY SSF143081 4 200 3.4E-47 T 23-10-2018 IPR036590 SOS response associated peptidase-like CDG62_09785 3692002750c695df7d649849a5bc9b57 216 Pfam PF02586 SOS response associated peptidase (SRAP) 45 187 3.2E-20 T 23-10-2018 IPR003738 SOS response associated peptidase (SRAP) CDG62_09785 3692002750c695df7d649849a5bc9b57 216 Gene3D G3DSA:3.90.1680.10 1 208 1.1E-50 T 23-10-2018 IPR036590 SOS response associated peptidase-like CDG62_17225 41f21af006a2a02779451e76fa9367eb 550 Gene3D G3DSA:2.40.110.20 131 285 3.0E-53 T 23-10-2018 CDG62_17225 41f21af006a2a02779451e76fa9367eb 550 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 402 421 - T 23-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CDG62_17225 41f21af006a2a02779451e76fa9367eb 550 SUPERFAMILY SSF56645 99 297 2.26E-31 T 23-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 CDG62_17225 41f21af006a2a02779451e76fa9367eb 550 Gene3D G3DSA:1.20.140.10 286 452 1.9E-36 T 23-10-2018 CDG62_17225 41f21af006a2a02779451e76fa9367eb 550 SUPERFAMILY SSF47203 288 445 1.05E-36 T 23-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 CDG62_17225 41f21af006a2a02779451e76fa9367eb 550 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 280 2.6E-15 T 23-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CDG62_17225 41f21af006a2a02779451e76fa9367eb 550 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 443 1.9E-31 T 23-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CDG62_00510 9f60796c6974ee1423e32f01a31957df 90 Gene3D G3DSA:1.10.260.40 2 90 5.6E-21 T 23-10-2018 CDG62_00510 9f60796c6974ee1423e32f01a31957df 90 Pfam PF01381 Helix-turn-helix 37 75 1.1E-10 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_00510 9f60796c6974ee1423e32f01a31957df 90 SMART SM00530 36 90 1.1E-8 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_00510 9f60796c6974ee1423e32f01a31957df 90 SUPERFAMILY SSF47413 37 80 1.26E-12 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG62_00835 232de9bdf737aafd65b5234e9a9550af 288 Pfam PF13280 WYL domain 119 249 1.4E-10 T 23-10-2018 IPR026881 WYL domain CDG62_00835 232de9bdf737aafd65b5234e9a9550af 288 PIRSF PIRSF015558 1 282 1.4E-71 T 23-10-2018 IPR016634 WYL domain protein, s026 type CDG62_14340 26711d321acf41334f91b9817953b45a 389 TIGRFAM TIGR00937 2A51: chromate efflux transporter 13 382 7.6E-83 T 23-10-2018 IPR014047 Chromate transporter, long chain CDG62_14340 26711d321acf41334f91b9817953b45a 389 Pfam PF02417 Chromate transporter 8 173 7.6E-34 T 23-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CDG62_14340 26711d321acf41334f91b9817953b45a 389 Pfam PF02417 Chromate transporter 225 382 1.2E-30 T 23-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CDG62_14340 26711d321acf41334f91b9817953b45a 389 PIRSF PIRSF004810 1 388 5.3E-99 T 23-10-2018 IPR014047 Chromate transporter, long chain CDG62_06145 f8b1a6d11fe2b148a903907f8d05f71f 148 Pfam PF13474 SnoaL-like domain 19 134 1.8E-11 T 23-10-2018 IPR037401 SnoaL-like domain CDG62_06145 f8b1a6d11fe2b148a903907f8d05f71f 148 Gene3D G3DSA:3.10.450.50 10 142 5.5E-24 T 23-10-2018 CDG62_06145 f8b1a6d11fe2b148a903907f8d05f71f 148 SUPERFAMILY SSF54427 14 131 4.65E-17 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG62_08435 f74a2578330b0319911362a81d5d1b3f 88 SUPERFAMILY SSF54285 11 88 2.06E-7 T 23-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDG62_08435 f74a2578330b0319911362a81d5d1b3f 88 Gene3D G3DSA:3.10.20.30 9 88 2.4E-7 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG62_08435 f74a2578330b0319911362a81d5d1b3f 88 Pfam PF02597 ThiS family 32 88 1.9E-6 T 23-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CDG62_05645 5cca602ccb5855e9d7341621c58d8eb3 298 Pfam PF01039 Carboxyl transferase domain 122 257 3.2E-14 T 23-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 CDG62_05645 5cca602ccb5855e9d7341621c58d8eb3 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 178 196 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_05645 5cca602ccb5855e9d7341621c58d8eb3 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 215 232 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_05645 5cca602ccb5855e9d7341621c58d8eb3 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 266 275 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_05645 5cca602ccb5855e9d7341621c58d8eb3 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 244 255 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_05645 5cca602ccb5855e9d7341621c58d8eb3 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 144 158 3.4E-39 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_05645 5cca602ccb5855e9d7341621c58d8eb3 298 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 296 34.607 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_05645 5cca602ccb5855e9d7341621c58d8eb3 298 SUPERFAMILY SSF52096 43 296 1.87E-74 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_05645 5cca602ccb5855e9d7341621c58d8eb3 298 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 42 296 3.2E-108 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_05645 5cca602ccb5855e9d7341621c58d8eb3 298 Gene3D G3DSA:3.90.226.10 42 297 3.0E-72 T 23-10-2018 CDG62_12620 b938c544cd5d36dc65a4fec69660cfc3 323 Gene3D G3DSA:1.20.1530.20 2 320 1.1E-32 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG62_12620 b938c544cd5d36dc65a4fec69660cfc3 323 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 318 2.1E-92 T 23-10-2018 IPR016833 Putative sodium bile acid cotransporter CDG62_12620 b938c544cd5d36dc65a4fec69660cfc3 323 PIRSF PIRSF026166 1 323 3.5E-122 T 23-10-2018 IPR016833 Putative sodium bile acid cotransporter CDG62_08830 22fa277b32002e25d5fe207529bf7c09 432 Pfam PF03109 ABC1 family 99 217 2.8E-31 T 23-10-2018 IPR004147 UbiB domain CDG62_08830 22fa277b32002e25d5fe207529bf7c09 432 SUPERFAMILY SSF56112 79 360 2.11E-22 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_03700 5e21a9a79127e0473ecffbe400fe0cfb 216 Gene3D G3DSA:3.40.50.12740 1 210 1.8E-53 T 23-10-2018 CDG62_03700 5e21a9a79127e0473ecffbe400fe0cfb 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.4E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_03700 5e21a9a79127e0473ecffbe400fe0cfb 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.4E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_03700 5e21a9a79127e0473ecffbe400fe0cfb 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.4E-11 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_03700 5e21a9a79127e0473ecffbe400fe0cfb 216 SUPERFAMILY SSF52172 1 129 2.56E-28 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_03700 5e21a9a79127e0473ecffbe400fe0cfb 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_03700 5e21a9a79127e0473ecffbe400fe0cfb 216 SUPERFAMILY SSF46894 143 210 1.87E-20 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG62_03700 5e21a9a79127e0473ecffbe400fe0cfb 216 SMART SM00421 149 206 4.1E-22 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_03700 5e21a9a79127e0473ecffbe400fe0cfb 216 SMART SM00448 1 115 1.5E-24 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_03700 5e21a9a79127e0473ecffbe400fe0cfb 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.2E-19 T 23-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CDG62_03700 5e21a9a79127e0473ecffbe400fe0cfb 216 Pfam PF00072 Response regulator receiver domain 3 115 4.8E-23 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_05225 b7da4546535698bb433b42afdfc148ae 329 Pfam PF06144 DNA polymerase III, delta subunit 20 181 1.7E-11 T 23-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CDG62_05225 b7da4546535698bb433b42afdfc148ae 329 Gene3D G3DSA:3.40.50.300 7 134 4.4E-22 T 23-10-2018 CDG62_05225 b7da4546535698bb433b42afdfc148ae 329 SUPERFAMILY SSF48019 208 326 3.91E-22 T 23-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CDG62_05225 b7da4546535698bb433b42afdfc148ae 329 Gene3D G3DSA:1.10.8.60 143 209 9.0E-8 T 23-10-2018 CDG62_05225 b7da4546535698bb433b42afdfc148ae 329 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 20 322 2.3E-41 T 23-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CDG62_05225 b7da4546535698bb433b42afdfc148ae 329 Gene3D G3DSA:1.20.272.10 210 328 8.4E-20 T 23-10-2018 CDG62_05225 b7da4546535698bb433b42afdfc148ae 329 SUPERFAMILY SSF52540 2 206 1.95E-23 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_07990 d33a39bf22dd4faeb6d7eef61272f104 151 SMART SM00344 1 110 8.6E-42 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG62_07990 d33a39bf22dd4faeb6d7eef61272f104 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.2E-19 T 23-10-2018 CDG62_07990 d33a39bf22dd4faeb6d7eef61272f104 151 Gene3D G3DSA:1.10.10.10 2 53 7.6E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_07990 d33a39bf22dd4faeb6d7eef61272f104 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.5E-16 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_07990 d33a39bf22dd4faeb6d7eef61272f104 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.5E-16 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_07990 d33a39bf22dd4faeb6d7eef61272f104 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.5E-16 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_07990 d33a39bf22dd4faeb6d7eef61272f104 151 Pfam PF01037 Lrp/AsnC ligand binding domain 69 139 6.8E-20 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG62_07990 d33a39bf22dd4faeb6d7eef61272f104 151 SUPERFAMILY SSF46785 1 82 2.83E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_07990 d33a39bf22dd4faeb6d7eef61272f104 151 SUPERFAMILY SSF54909 62 150 2.82E-20 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_07990 d33a39bf22dd4faeb6d7eef61272f104 151 Gene3D G3DSA:3.30.70.920 54 137 4.5E-25 T 23-10-2018 CDG62_05565 7bf3320976907991e8a0df004ce274dc 123 Pfam PF04237 YjbR 12 103 4.3E-20 T 23-10-2018 IPR007351 Uncharacterised protein YjbR CDG62_05565 7bf3320976907991e8a0df004ce274dc 123 SUPERFAMILY SSF142906 9 116 1.26E-33 T 23-10-2018 IPR038056 YjbR-like superfamily CDG62_05565 7bf3320976907991e8a0df004ce274dc 123 Gene3D G3DSA:3.90.1150.30 2 123 4.3E-35 T 23-10-2018 IPR038056 YjbR-like superfamily CDG62_12515 2e384e4d3e4e7595b16f44d346ebf83a 207 Pfam PF00717 Peptidase S24-like 101 149 6.6E-9 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDG62_12515 2e384e4d3e4e7595b16f44d346ebf83a 207 SUPERFAMILY SSF51306 81 200 1.66E-17 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CDG62_12515 2e384e4d3e4e7595b16f44d346ebf83a 207 Gene3D G3DSA:2.10.109.10 71 204 1.2E-24 T 23-10-2018 CDG62_12585 e512c07857ca04ecf671e91b35e42175 700 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 597 5.7E-33 T 23-10-2018 IPR025299 CstA, C-terminal domain CDG62_12585 e512c07857ca04ecf671e91b35e42175 700 Pfam PF02554 Carbon starvation protein CstA 38 414 1.4E-171 T 23-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CDG62_07285 1f760dcb2e541d9b57ea730736a0ca29 164 Gene3D G3DSA:2.60.120.10 13 156 2.8E-37 T 23-10-2018 IPR014710 RmlC-like jelly roll fold CDG62_07285 1f760dcb2e541d9b57ea730736a0ca29 164 Pfam PF12973 ChrR Cupin-like domain 29 110 8.2E-8 T 23-10-2018 IPR025979 ChrR-like cupin domain CDG62_07285 1f760dcb2e541d9b57ea730736a0ca29 164 SUPERFAMILY SSF51182 14 135 2.91E-21 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG62_03340 e0f8ea972f79b3008fbb1695266aaa79 455 Pfam PF01554 MatE 23 183 5.9E-32 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG62_03340 e0f8ea972f79b3008fbb1695266aaa79 455 Pfam PF01554 MatE 252 413 1.2E-27 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG62_03340 e0f8ea972f79b3008fbb1695266aaa79 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 424 1.7E-72 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG62_03340 e0f8ea972f79b3008fbb1695266aaa79 455 PIRSF PIRSF006603 1 455 1.5E-100 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG62_16925 e48f73d95a5365644e65d516941b695e 270 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 259 19.541 T 23-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CDG62_16925 e48f73d95a5365644e65d516941b695e 270 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 136 148 - T 23-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CDG62_16925 e48f73d95a5365644e65d516941b695e 270 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 259 8.6E-77 T 23-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CDG62_16925 e48f73d95a5365644e65d516941b695e 270 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 254 1.5E-75 T 23-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 CDG62_10095 b6de60f2c01dbf8eb3e0f7f776343eed 434 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 318 339 - T 23-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CDG62_10095 b6de60f2c01dbf8eb3e0f7f776343eed 434 Gene3D G3DSA:3.10.50.40 277 417 9.6E-42 T 23-10-2018 CDG62_10095 b6de60f2c01dbf8eb3e0f7f776343eed 434 Pfam PF09312 SurA N-terminal domain 31 149 1.2E-23 T 23-10-2018 IPR015391 SurA N-terminal CDG62_10095 b6de60f2c01dbf8eb3e0f7f776343eed 434 SUPERFAMILY SSF54534 281 381 6.54E-32 T 23-10-2018 CDG62_10095 b6de60f2c01dbf8eb3e0f7f776343eed 434 SUPERFAMILY SSF54534 180 274 6.04E-15 T 23-10-2018 CDG62_10095 b6de60f2c01dbf8eb3e0f7f776343eed 434 Pfam PF13616 PPIC-type PPIASE domain 277 380 1.1E-30 T 23-10-2018 CDG62_10095 b6de60f2c01dbf8eb3e0f7f776343eed 434 Gene3D G3DSA:1.10.4030.30 31 276 2.0E-51 T 23-10-2018 CDG62_10095 b6de60f2c01dbf8eb3e0f7f776343eed 434 SUPERFAMILY SSF109998 31 202 1.14E-28 T 23-10-2018 IPR027304 Trigger factor/SurA domain superfamily CDG62_10095 b6de60f2c01dbf8eb3e0f7f776343eed 434 Gene3D G3DSA:3.10.50.40 179 272 2.0E-51 T 23-10-2018 CDG62_10095 b6de60f2c01dbf8eb3e0f7f776343eed 434 Pfam PF00639 PPIC-type PPIASE domain 191 269 1.6E-8 T 23-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 CDG62_10095 b6de60f2c01dbf8eb3e0f7f776343eed 434 Hamap MF_01183 Chaperone SurA [surA]. 5 425 25.593 T 23-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 CDG62_00740 6fa7200b934e84f19fdbdc2a99ac2a30 720 Gene3D G3DSA:3.40.50.1010 576 710 2.1E-17 T 23-10-2018 CDG62_00740 6fa7200b934e84f19fdbdc2a99ac2a30 720 SMART SM00670 578 696 1.6E-9 T 23-10-2018 IPR002716 PIN domain CDG62_00740 6fa7200b934e84f19fdbdc2a99ac2a30 720 Pfam PF13638 PIN domain 581 706 1.4E-17 T 23-10-2018 IPR002716 PIN domain CDG62_03350 3cb290418b10d0139bcd7cfd0f3e4811 435 Pfam PF04286 Protein of unknown function (DUF445) 54 427 8.7E-73 T 23-10-2018 IPR007383 Protein of unknown function DUF445 CDG62_00745 9bcc87e9e755b544aec4d54d0a0cd24e 1274 SUPERFAMILY SSF52540 398 1222 1.21E-46 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00745 9bcc87e9e755b544aec4d54d0a0cd24e 1274 Gene3D G3DSA:3.40.50.300 350 598 5.0E-34 T 23-10-2018 CDG62_00745 9bcc87e9e755b544aec4d54d0a0cd24e 1274 Gene3D G3DSA:3.40.50.300 614 1026 7.8E-17 T 23-10-2018 CDG62_00745 9bcc87e9e755b544aec4d54d0a0cd24e 1274 Pfam PF13087 AAA domain 1005 1219 3.2E-36 T 23-10-2018 CDG62_00745 9bcc87e9e755b544aec4d54d0a0cd24e 1274 SMART SM00382 419 984 0.0028 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_00745 9bcc87e9e755b544aec4d54d0a0cd24e 1274 Pfam PF13086 AAA domain 404 586 1.1E-19 T 23-10-2018 CDG62_00745 9bcc87e9e755b544aec4d54d0a0cd24e 1274 Pfam PF13086 AAA domain 808 964 2.1E-16 T 23-10-2018 CDG62_00745 9bcc87e9e755b544aec4d54d0a0cd24e 1274 Gene3D G3DSA:3.40.50.300 1027 1266 4.1E-37 T 23-10-2018 CDG62_17285 7c9ff7d5b286539f0e9f1cf5f67fd67e 1157 Pfam PF10150 Ribonuclease E/G family 119 388 4.6E-94 T 23-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CDG62_17285 7c9ff7d5b286539f0e9f1cf5f67fd67e 1157 Pfam PF00575 S1 RNA binding domain 36 116 4.6E-10 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG62_17285 7c9ff7d5b286539f0e9f1cf5f67fd67e 1157 Gene3D G3DSA:3.40.1260.20 399 504 7.6E-31 T 23-10-2018 CDG62_17285 7c9ff7d5b286539f0e9f1cf5f67fd67e 1157 SUPERFAMILY SSF50249 40 123 1.85E-16 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_17285 7c9ff7d5b286539f0e9f1cf5f67fd67e 1157 SMART SM00316 37 117 8.2E-9 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG62_17285 7c9ff7d5b286539f0e9f1cf5f67fd67e 1157 Hamap MF_00970 Ribonuclease E [rne]. 1 1150 33.609 T 23-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 CDG62_17285 7c9ff7d5b286539f0e9f1cf5f67fd67e 1157 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 9.5E-159 T 23-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CDG62_17285 7c9ff7d5b286539f0e9f1cf5f67fd67e 1157 Gene3D G3DSA:2.40.50.140 31 123 2.9E-28 T 23-10-2018 CDG62_13285 bcf94a6a3438b561a4b10b0648a94c5b 390 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 42 271 1.1E-7 T 23-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDG62_13285 bcf94a6a3438b561a4b10b0648a94c5b 390 Gene3D G3DSA:2.40.160.60 33 390 3.5E-24 T 23-10-2018 CDG62_13285 bcf94a6a3438b561a4b10b0648a94c5b 390 SUPERFAMILY SSF56935 36 387 3.97E-44 T 23-10-2018 CDG62_15980 f6742741014735511d195823750a76b7 368 Pfam PF01757 Acyltransferase family 4 349 1.5E-31 T 23-10-2018 IPR002656 Acyltransferase 3 GO:0016747 CDG62_19065 cbe4d6a6838a200fc8e7951664ae49e8 333 Gene3D G3DSA:3.40.50.620 5 181 2.0E-60 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_19065 cbe4d6a6838a200fc8e7951664ae49e8 333 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 19 73 3.0E-7 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDG62_19065 cbe4d6a6838a200fc8e7951664ae49e8 333 Gene3D G3DSA:2.40.30.30 182 331 3.8E-24 T 23-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 CDG62_19065 cbe4d6a6838a200fc8e7951664ae49e8 333 SMART SM00904 179 326 4.4E-38 T 23-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 CDG62_19065 cbe4d6a6838a200fc8e7951664ae49e8 333 Pfam PF01687 Riboflavin kinase 180 321 2.7E-25 T 23-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 CDG62_19065 cbe4d6a6838a200fc8e7951664ae49e8 333 SUPERFAMILY SSF82114 170 326 2.83E-31 T 23-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 CDG62_19065 cbe4d6a6838a200fc8e7951664ae49e8 333 PIRSF PIRSF004491 1 331 2.6E-107 T 23-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CDG62_19065 cbe4d6a6838a200fc8e7951664ae49e8 333 Pfam PF06574 FAD synthetase 13 163 8.9E-49 T 23-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CDG62_19065 cbe4d6a6838a200fc8e7951664ae49e8 333 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 222 1.9E-61 T 23-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CDG62_19065 cbe4d6a6838a200fc8e7951664ae49e8 333 SUPERFAMILY SSF52374 17 171 1.52E-32 T 23-10-2018 CDG62_07190 30caf55aa073c4fc650617bc2309d7fe 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 6.2E-6 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_07190 30caf55aa073c4fc650617bc2309d7fe 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 6.2E-6 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_07190 30caf55aa073c4fc650617bc2309d7fe 192 SUPERFAMILY SSF46689 5 81 5.08E-14 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_07190 30caf55aa073c4fc650617bc2309d7fe 192 SUPERFAMILY SSF48498 77 186 1.21E-7 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG62_07190 30caf55aa073c4fc650617bc2309d7fe 192 Gene3D G3DSA:1.10.357.10 1 190 8.4E-44 T 23-10-2018 CDG62_07190 30caf55aa073c4fc650617bc2309d7fe 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 53 8.0E-10 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_11455 f07c1f18fe55103cac611bea81e2e7d2 232 Gene3D G3DSA:3.40.50.1240 1 228 3.3E-30 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG62_11455 f07c1f18fe55103cac611bea81e2e7d2 232 SMART SM00855 3 176 6.0E-11 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG62_11455 f07c1f18fe55103cac611bea81e2e7d2 232 SUPERFAMILY SSF53254 1 222 4.58E-32 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG62_11455 f07c1f18fe55103cac611bea81e2e7d2 232 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 113 217 6.5E-8 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG62_11455 f07c1f18fe55103cac611bea81e2e7d2 232 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 84 6.9E-8 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG62_09595 938df9b67abd26c81d2d22d24a54174a 158 Gene3D G3DSA:3.40.960.10 31 145 1.7E-5 T 23-10-2018 CDG62_07835 82871b5c19d920e5702a6abf85511728 312 Gene3D G3DSA:3.40.50.10330 41 302 4.2E-89 T 23-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 CDG62_07835 82871b5c19d920e5702a6abf85511728 312 Hamap MF_00361 NAD kinase [nadK]. 21 302 32.238 T 23-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CDG62_07835 82871b5c19d920e5702a6abf85511728 312 Pfam PF01513 ATP-NAD kinase 64 285 4.3E-63 T 23-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CDG62_07835 82871b5c19d920e5702a6abf85511728 312 SUPERFAMILY SSF111331 22 305 1.57E-86 T 23-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CDG62_07835 82871b5c19d920e5702a6abf85511728 312 Gene3D G3DSA:2.60.200.30 143 279 4.2E-89 T 23-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CDG62_08375 588e8ea76731e2ed6012edd90368c7ee 1323 Gene3D G3DSA:1.10.10.2130 425 469 1.7E-9 T 23-10-2018 CDG62_08375 588e8ea76731e2ed6012edd90368c7ee 1323 SMART SM00487 58 242 1.5E-27 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG62_08375 588e8ea76731e2ed6012edd90368c7ee 1323 SUPERFAMILY SSF52540 60 603 1.22E-92 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_08375 588e8ea76731e2ed6012edd90368c7ee 1323 SMART SM00382 75 384 7.1E-5 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_08375 588e8ea76731e2ed6012edd90368c7ee 1323 SMART SM00490 303 404 1.9E-13 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_08375 588e8ea76731e2ed6012edd90368c7ee 1323 Gene3D G3DSA:1.20.120.1080 516 589 3.0E-14 T 23-10-2018 CDG62_08375 588e8ea76731e2ed6012edd90368c7ee 1323 Pfam PF04408 Helicase associated domain (HA2) 466 590 1.7E-14 T 23-10-2018 IPR007502 Helicase-associated domain GO:0004386 CDG62_08375 588e8ea76731e2ed6012edd90368c7ee 1323 Gene3D G3DSA:3.40.50.300 8 235 6.5E-73 T 23-10-2018 CDG62_08375 588e8ea76731e2ed6012edd90368c7ee 1323 Pfam PF11898 Domain of unknown function (DUF3418) 747 1318 2.6E-147 T 23-10-2018 IPR024590 RNA helicase HrpA, C-terminal CDG62_08375 588e8ea76731e2ed6012edd90368c7ee 1323 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 657 733 6.0E-16 T 23-10-2018 IPR011709 Domain of unknown function DUF1605 CDG62_08375 588e8ea76731e2ed6012edd90368c7ee 1323 Gene3D G3DSA:3.40.50.300 236 421 2.2E-50 T 23-10-2018 CDG62_08375 588e8ea76731e2ed6012edd90368c7ee 1323 SMART SM00847 464 595 1.3E-29 T 23-10-2018 IPR007502 Helicase-associated domain GO:0004386 CDG62_08375 588e8ea76731e2ed6012edd90368c7ee 1323 Pfam PF00271 Helicase conserved C-terminal domain 288 403 4.1E-11 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_08375 588e8ea76731e2ed6012edd90368c7ee 1323 Pfam PF00270 DEAD/DEAH box helicase 65 216 1.2E-6 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDG62_04010 e002bc31dbcb103f241942a6e9a98e05 222 SUPERFAMILY SSF53098 19 199 5.56E-34 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_04010 e002bc31dbcb103f241942a6e9a98e05 222 SMART SM00474 30 201 5.5E-7 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CDG62_04010 e002bc31dbcb103f241942a6e9a98e05 222 Gene3D G3DSA:3.30.420.10 21 210 2.0E-36 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_04010 e002bc31dbcb103f241942a6e9a98e05 222 Pfam PF01612 3'-5' exonuclease 31 197 8.4E-18 T 23-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CDG62_18030 471d9c8103781221a490f5947764bccd 107 Pfam PF00816 H-NS histone family 11 100 2.7E-20 T 23-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CDG62_18030 471d9c8103781221a490f5947764bccd 107 SMART SM00528 62 107 1.1E-13 T 23-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CDG62_18030 471d9c8103781221a490f5947764bccd 107 SUPERFAMILY SSF81273 65 107 1.61E-11 T 23-10-2018 CDG62_18030 471d9c8103781221a490f5947764bccd 107 Gene3D G3DSA:4.10.430.10 57 107 5.7E-18 T 23-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 CDG62_06775 5aeba37328b1c7ad632e8ff484a993e7 98 SUPERFAMILY SSF50715 5 97 8.72E-26 T 23-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG62_06775 5aeba37328b1c7ad632e8ff484a993e7 98 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 17 97 3.0E-35 T 23-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CDG62_06775 5aeba37328b1c7ad632e8ff484a993e7 98 Pfam PF01386 Ribosomal L25p family 6 95 8.3E-25 T 23-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CDG62_06775 5aeba37328b1c7ad632e8ff484a993e7 98 Gene3D G3DSA:2.40.240.10 3 98 1.3E-29 T 23-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CDG62_06775 5aeba37328b1c7ad632e8ff484a993e7 98 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 4 98 24.056 T 23-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CDG62_11425 bf08a3ca091fbbeecd096099b39dc944 517 Gene3D G3DSA:3.30.870.10 57 244 1.5E-37 T 23-10-2018 CDG62_11425 bf08a3ca091fbbeecd096099b39dc944 517 SUPERFAMILY SSF56024 274 464 1.28E-26 T 23-10-2018 CDG62_11425 bf08a3ca091fbbeecd096099b39dc944 517 Pfam PF13091 PLD-like domain 310 460 1.0E-17 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDG62_11425 bf08a3ca091fbbeecd096099b39dc944 517 Pfam PF13091 PLD-like domain 74 197 4.6E-17 T 23-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CDG62_11425 bf08a3ca091fbbeecd096099b39dc944 517 Gene3D G3DSA:3.30.870.10 288 471 6.6E-34 T 23-10-2018 CDG62_11425 bf08a3ca091fbbeecd096099b39dc944 517 SUPERFAMILY SSF56024 71 233 7.18E-38 T 23-10-2018 CDG62_11425 bf08a3ca091fbbeecd096099b39dc944 517 SMART SM00155 163 190 0.02 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CDG62_11425 bf08a3ca091fbbeecd096099b39dc944 517 SMART SM00155 408 434 3.0E-5 T 23-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CDG62_04430 e9746eba71b676a114c4aa6910edccee 183 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 171 182 - T 23-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDG62_04430 e9746eba71b676a114c4aa6910edccee 183 SUPERFAMILY SSF49329 38 183 6.68E-45 T 23-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDG62_04430 e9746eba71b676a114c4aa6910edccee 183 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 47 182 3.9E-33 T 23-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDG62_04430 e9746eba71b676a114c4aa6910edccee 183 Gene3D G3DSA:2.60.40.200 32 183 3.7E-50 T 23-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDG62_04430 e9746eba71b676a114c4aa6910edccee 183 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 77 87 - T 23-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CDG62_06930 cf254aeb76f41725b2c51a9cf0563521 236 SUPERFAMILY SSF54292 3 105 1.35E-27 T 23-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 CDG62_06930 cf254aeb76f41725b2c51a9cf0563521 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 10 228 1.3E-82 T 23-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_06930 cf254aeb76f41725b2c51a9cf0563521 236 SUPERFAMILY SSF46548 106 232 3.49E-38 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDG62_06930 cf254aeb76f41725b2c51a9cf0563521 236 Gene3D G3DSA:3.10.20.30 1 105 7.5E-35 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG62_06930 cf254aeb76f41725b2c51a9cf0563521 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 5.7E-9 T 23-10-2018 CDG62_06930 cf254aeb76f41725b2c51a9cf0563521 236 Gene3D G3DSA:1.10.1060.10 106 235 4.4E-56 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDG62_06930 cf254aeb76f41725b2c51a9cf0563521 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG62_06930 cf254aeb76f41725b2c51a9cf0563521 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 110 6.4E-30 T 23-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CDG62_12310 3421eaab44d553db0ea5ab808eedf01f 447 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 9 424 1.3E-161 T 23-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CDG62_12310 3421eaab44d553db0ea5ab808eedf01f 447 Pfam PF00296 Luciferase-like monooxygenase 20 379 1.6E-61 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CDG62_12310 3421eaab44d553db0ea5ab808eedf01f 447 Gene3D G3DSA:3.20.20.30 1 444 2.9E-151 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG62_12310 3421eaab44d553db0ea5ab808eedf01f 447 PIRSF PIRSF000337 3 440 1.1E-143 T 23-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 CDG62_12310 3421eaab44d553db0ea5ab808eedf01f 447 SUPERFAMILY SSF51679 4 431 3.09E-126 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG62_15015 4dcb55eb7a6e64c189ce4044da7c588d 201 Gene3D G3DSA:3.30.1150.10 100 200 4.6E-16 T 23-10-2018 CDG62_15015 4dcb55eb7a6e64c189ce4044da7c588d 201 PRINTS PR01374 Gram-negative bacterial tonB protein signature 117 138 6.2E-6 T 23-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CDG62_15015 4dcb55eb7a6e64c189ce4044da7c588d 201 PRINTS PR01374 Gram-negative bacterial tonB protein signature 15 25 6.2E-6 T 23-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CDG62_15015 4dcb55eb7a6e64c189ce4044da7c588d 201 PRINTS PR01374 Gram-negative bacterial tonB protein signature 138 156 6.2E-6 T 23-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CDG62_15015 4dcb55eb7a6e64c189ce4044da7c588d 201 SUPERFAMILY SSF74653 114 191 7.65E-15 T 23-10-2018 CDG62_15015 4dcb55eb7a6e64c189ce4044da7c588d 201 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 122 198 3.3E-12 T 23-10-2018 IPR037682 TonB, C-terminal GO:0055085 CDG62_02165 2731c6044c3b62f92144dc1254feb257 168 SUPERFAMILY SSF50199 21 161 3.92E-28 T 23-10-2018 CDG62_02165 2731c6044c3b62f92144dc1254feb257 168 Pfam PF00565 Staphylococcal nuclease homologue 51 155 1.3E-17 T 23-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 CDG62_02165 2731c6044c3b62f92144dc1254feb257 168 SMART SM00318 25 155 9.4E-30 T 23-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 CDG62_02165 2731c6044c3b62f92144dc1254feb257 168 ProSitePatterns PS01284 Thermonuclease family signature 2. 90 100 - T 23-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 CDG62_02165 2731c6044c3b62f92144dc1254feb257 168 Gene3D G3DSA:2.40.50.90 21 159 1.6E-27 T 23-10-2018 IPR035437 SNase-like, OB-fold superfamily CDG62_02560 e66dacad5bd95aa0ee351d4b90dbc0be 78 ProDom PD007968 PLASMID MERE URF-1 RESISTANCE MERCURY MERCURIC DELTA URF1 PRECURSOR TNIB 18 78 2.0E-27 T 23-10-2018 IPR007746 Broad mercury transporter MerE GO:0015097|GO:0015694|GO:0016020 CDG62_02560 e66dacad5bd95aa0ee351d4b90dbc0be 78 Pfam PF05052 MerE protein 1 75 1.7E-47 T 23-10-2018 IPR007746 Broad mercury transporter MerE GO:0015097|GO:0015694|GO:0016020 CDG62_08030 5bb610efd39f41669ccd62201f6936e5 349 Pfam PF00248 Aldo/keto reductase family 15 340 2.9E-67 T 23-10-2018 IPR023210 NADP-dependent oxidoreductase domain CDG62_08030 5bb610efd39f41669ccd62201f6936e5 349 Gene3D G3DSA:3.20.20.100 1 349 4.3E-127 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CDG62_08030 5bb610efd39f41669ccd62201f6936e5 349 PRINTS PR00069 Aldo-keto reductase signature 167 184 5.0E-7 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG62_08030 5bb610efd39f41669ccd62201f6936e5 349 PRINTS PR00069 Aldo-keto reductase signature 116 134 5.0E-7 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG62_08030 5bb610efd39f41669ccd62201f6936e5 349 SUPERFAMILY SSF51430 1 347 1.7E-104 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CDG62_09515 43149716493f81b40d2733141a1fe10d 247 SUPERFAMILY SSF47413 3 68 1.04E-8 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG62_09515 43149716493f81b40d2733141a1fe10d 247 Pfam PF00717 Peptidase S24-like 163 230 2.7E-9 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDG62_09515 43149716493f81b40d2733141a1fe10d 247 Gene3D G3DSA:2.10.109.10 126 246 1.2E-13 T 23-10-2018 CDG62_09515 43149716493f81b40d2733141a1fe10d 247 SMART SM00530 7 62 6.0E-5 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_09515 43149716493f81b40d2733141a1fe10d 247 SUPERFAMILY SSF51306 134 244 6.8E-19 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CDG62_09515 43149716493f81b40d2733141a1fe10d 247 Gene3D G3DSA:1.10.260.40 1 71 1.6E-13 T 23-10-2018 CDG62_18615 399902e910c236e6f1dfe37cc84106c8 200 Gene3D G3DSA:3.40.50.1820 2 197 7.4E-35 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_18615 399902e910c236e6f1dfe37cc84106c8 200 SUPERFAMILY SSF53474 3 195 4.32E-37 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_18615 399902e910c236e6f1dfe37cc84106c8 200 Pfam PF00561 alpha/beta hydrolase fold 119 183 4.1E-6 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_18615 399902e910c236e6f1dfe37cc84106c8 200 Pfam PF00561 alpha/beta hydrolase fold 3 117 2.4E-7 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_06285 693ec52336a3b19b5fe74d6dfe1310dc 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 17 137 4.9E-28 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CDG62_06285 693ec52336a3b19b5fe74d6dfe1310dc 141 Gene3D G3DSA:3.30.420.270 64 133 2.5E-10 T 23-10-2018 CDG62_05825 bb534bdbc741a43b61a3156970e2e614 270 SUPERFAMILY SSF53335 10 268 5.07E-75 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_05825 bb534bdbc741a43b61a3156970e2e614 270 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 15 267 6.2E-85 T 23-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CDG62_05825 bb534bdbc741a43b61a3156970e2e614 270 SMART SM00650 30 202 1.8E-81 T 23-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CDG62_05825 bb534bdbc741a43b61a3156970e2e614 270 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 46 73 - T 23-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CDG62_05825 bb534bdbc741a43b61a3156970e2e614 270 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 14 269 57.101 T 23-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CDG62_05825 bb534bdbc741a43b61a3156970e2e614 270 Gene3D G3DSA:1.10.8.100 207 270 6.4E-21 T 23-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 CDG62_05825 bb534bdbc741a43b61a3156970e2e614 270 Gene3D G3DSA:3.40.50.150 8 203 1.9E-66 T 23-10-2018 CDG62_05825 bb534bdbc741a43b61a3156970e2e614 270 Pfam PF00398 Ribosomal RNA adenine dimethylase 14 266 7.2E-64 T 23-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CDG62_19035 b16a3abd2a997d6ebac6319ad4a96db1 391 Pfam PF00296 Luciferase-like monooxygenase 1 327 6.3E-85 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CDG62_19035 b16a3abd2a997d6ebac6319ad4a96db1 391 Gene3D G3DSA:3.20.20.30 1 363 4.4E-142 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG62_19035 b16a3abd2a997d6ebac6319ad4a96db1 391 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 1 382 78.144 T 23-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 CDG62_19035 b16a3abd2a997d6ebac6319ad4a96db1 391 SUPERFAMILY SSF51679 1 351 1.44E-93 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG62_19035 b16a3abd2a997d6ebac6319ad4a96db1 391 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 351 9.7E-188 T 23-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 CDG62_07730 d0a0cea4fedd5b6b7712433cd97ea634 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG62_07730 d0a0cea4fedd5b6b7712433cd97ea634 84 SUPERFAMILY SSF54862 5 74 8.72E-17 T 23-10-2018 CDG62_07730 d0a0cea4fedd5b6b7712433cd97ea634 84 Gene3D G3DSA:3.30.70.20 2 81 4.1E-30 T 23-10-2018 CDG62_15280 46466cabc1e0643343c8744455e63b57 468 Pfam PF00155 Aminotransferase class I and II 144 457 1.6E-33 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG62_15280 46466cabc1e0643343c8744455e63b57 468 SMART SM00345 7 66 3.0E-10 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_15280 46466cabc1e0643343c8744455e63b57 468 Gene3D G3DSA:1.10.10.10 2 67 5.6E-16 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15280 46466cabc1e0643343c8744455e63b57 468 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 4.6E-11 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_15280 46466cabc1e0643343c8744455e63b57 468 Gene3D G3DSA:3.40.640.10 138 357 2.0E-85 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_15280 46466cabc1e0643343c8744455e63b57 468 SUPERFAMILY SSF53383 89 462 1.84E-86 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_15280 46466cabc1e0643343c8744455e63b57 468 SUPERFAMILY SSF46785 4 70 1.16E-14 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_15280 46466cabc1e0643343c8744455e63b57 468 Gene3D G3DSA:3.90.1150.10 95 461 2.0E-85 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_13340 2b0f17c4be397444be9b9e86692c6e98 267 SUPERFAMILY SSF52096 10 265 1.01E-90 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_13340 2b0f17c4be397444be9b9e86692c6e98 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 266 8.5E-85 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDG62_13340 2b0f17c4be397444be9b9e86692c6e98 267 Gene3D G3DSA:3.90.226.10 12 209 5.1E-75 T 23-10-2018 CDG62_13340 2b0f17c4be397444be9b9e86692c6e98 267 Gene3D G3DSA:1.10.12.10 210 266 2.3E-26 T 23-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDG62_13340 2b0f17c4be397444be9b9e86692c6e98 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 108 128 - T 23-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDG62_04135 b1bbaa157ee5b005f137c917f81f9d5e 307 Pfam PF01795 MraW methylase family 2 301 1.7E-103 T 23-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CDG62_04135 b1bbaa157ee5b005f137c917f81f9d5e 307 Gene3D G3DSA:1.10.150.170 110 209 7.9E-101 T 23-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 CDG62_04135 b1bbaa157ee5b005f137c917f81f9d5e 307 PIRSF PIRSF004486 1 303 4.6E-102 T 23-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CDG62_04135 b1bbaa157ee5b005f137c917f81f9d5e 307 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 3 302 36.51 T 23-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CDG62_04135 b1bbaa157ee5b005f137c917f81f9d5e 307 SUPERFAMILY SSF81799 111 207 4.45E-33 T 23-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 CDG62_04135 b1bbaa157ee5b005f137c917f81f9d5e 307 SUPERFAMILY SSF53335 3 302 1.1E-42 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_04135 b1bbaa157ee5b005f137c917f81f9d5e 307 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 301 1.7E-103 T 23-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 CDG62_04135 b1bbaa157ee5b005f137c917f81f9d5e 307 Gene3D G3DSA:3.40.50.150 6 301 7.9E-101 T 23-10-2018 CDG62_09255 457e9fa8f4362fdd3cacbc5670c42dab 526 PIRSF PIRSF006446 353 525 1.9E-30 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CDG62_09255 457e9fa8f4362fdd3cacbc5670c42dab 526 PIRSF PIRSF006446 2 333 1.8E-115 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CDG62_09255 457e9fa8f4362fdd3cacbc5670c42dab 526 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 5.9E-174 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CDG62_12040 0b78000cfa5ce52c5ecab20b4b444798 333 SUPERFAMILY SSF50129 12 140 1.35E-32 T 23-10-2018 IPR011032 GroES-like superfamily CDG62_12040 0b78000cfa5ce52c5ecab20b4b444798 333 SUPERFAMILY SSF51735 116 281 5.11E-34 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_12040 0b78000cfa5ce52c5ecab20b4b444798 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 88 3.3E-7 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDG62_12040 0b78000cfa5ce52c5ecab20b4b444798 333 SMART SM00829 9 330 1.1E-9 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDG62_12040 0b78000cfa5ce52c5ecab20b4b444798 333 Pfam PF13602 Zinc-binding dehydrogenase 190 330 1.4E-20 T 23-10-2018 CDG62_12040 0b78000cfa5ce52c5ecab20b4b444798 333 Gene3D G3DSA:3.40.50.720 127 269 3.4E-101 T 23-10-2018 CDG62_12040 0b78000cfa5ce52c5ecab20b4b444798 333 Gene3D G3DSA:3.90.180.10 26 330 3.4E-101 T 23-10-2018 CDG62_12040 0b78000cfa5ce52c5ecab20b4b444798 333 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 333 6.9E-147 T 23-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 CDG62_06330 b39606a29782ed2df5b9ad921c648dc1 575 Pfam PF00005 ABC transporter 344 494 1.1E-28 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_06330 b39606a29782ed2df5b9ad921c648dc1 575 SUPERFAMILY SSF52540 12 265 4.26E-62 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_06330 b39606a29782ed2df5b9ad921c648dc1 575 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_06330 b39606a29782ed2df5b9ad921c648dc1 575 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_06330 b39606a29782ed2df5b9ad921c648dc1 575 SUPERFAMILY SSF52540 318 567 7.37E-70 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_06330 b39606a29782ed2df5b9ad921c648dc1 575 Pfam PF00005 ABC transporter 33 193 8.1E-27 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_06330 b39606a29782ed2df5b9ad921c648dc1 575 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 275 0.015 T 23-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CDG62_06330 b39606a29782ed2df5b9ad921c648dc1 575 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 547 573 0.0012 T 23-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CDG62_06330 b39606a29782ed2df5b9ad921c648dc1 575 Gene3D G3DSA:3.40.50.300 316 574 6.2E-81 T 23-10-2018 CDG62_06330 b39606a29782ed2df5b9ad921c648dc1 575 Gene3D G3DSA:3.40.50.300 10 312 1.0E-81 T 23-10-2018 CDG62_06330 b39606a29782ed2df5b9ad921c648dc1 575 SMART SM00382 352 545 2.9E-13 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_06330 b39606a29782ed2df5b9ad921c648dc1 575 SMART SM00382 42 243 2.2E-12 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_16290 64809ceee5f7e0d6ce82d142cd05dbd2 307 Gene3D G3DSA:3.30.70.100 182 275 3.4E-19 T 23-10-2018 CDG62_16290 64809ceee5f7e0d6ce82d142cd05dbd2 307 Pfam PF00924 Mechanosensitive ion channel 70 270 4.9E-41 T 23-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CDG62_16290 64809ceee5f7e0d6ce82d142cd05dbd2 307 SUPERFAMILY SSF82861 26 109 1.7E-8 T 23-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CDG62_16290 64809ceee5f7e0d6ce82d142cd05dbd2 307 SUPERFAMILY SSF50182 112 181 5.56E-12 T 23-10-2018 IPR010920 LSM domain superfamily CDG62_16290 64809ceee5f7e0d6ce82d142cd05dbd2 307 SUPERFAMILY SSF82689 183 275 5.23E-20 T 23-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CDG62_16290 64809ceee5f7e0d6ce82d142cd05dbd2 307 Gene3D G3DSA:2.30.30.60 127 180 1.0E-7 T 23-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily CDG62_11080 36fd16b2bfa427ea6e705288e581de2e 232 Pfam PF08856 Protein of unknown function (DUF1826) 25 151 3.6E-5 T 23-10-2018 IPR014955 Protein of unknown function DUF1826 CDG62_01685 df6bb13311b35eb5e6710005bf0f8b91 322 SUPERFAMILY SSF144083 259 319 1.14E-18 T 23-10-2018 CDG62_01685 df6bb13311b35eb5e6710005bf0f8b91 322 Gene3D G3DSA:1.20.58.340 265 322 4.0E-22 T 23-10-2018 CDG62_01685 df6bb13311b35eb5e6710005bf0f8b91 322 Pfam PF01544 CorA-like Mg2+ transporter protein 32 318 3.2E-56 T 23-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CDG62_01685 df6bb13311b35eb5e6710005bf0f8b91 322 Gene3D G3DSA:1.20.58.340 133 243 5.2E-27 T 23-10-2018 CDG62_01685 df6bb13311b35eb5e6710005bf0f8b91 322 Gene3D G3DSA:3.30.460.20 2 132 4.0E-22 T 23-10-2018 CDG62_01685 df6bb13311b35eb5e6710005bf0f8b91 322 SUPERFAMILY SSF143865 3 248 1.29E-57 T 23-10-2018 CDG62_05330 507f4124f00354239a99c06ee3d21d35 431 PIRSF PIRSF001549 1 428 2.6E-119 T 23-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CDG62_05330 507f4124f00354239a99c06ee3d21d35 431 SUPERFAMILY SSF55681 7 324 1.31E-96 T 23-10-2018 CDG62_05330 507f4124f00354239a99c06ee3d21d35 431 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 416 6.2E-146 T 23-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CDG62_05330 507f4124f00354239a99c06ee3d21d35 431 SUPERFAMILY SSF52954 344 427 3.6E-15 T 23-10-2018 CDG62_05330 507f4124f00354239a99c06ee3d21d35 431 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 430 31.754 T 23-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CDG62_05330 507f4124f00354239a99c06ee3d21d35 431 Pfam PF13393 Histidyl-tRNA synthetase 9 316 3.5E-44 T 23-10-2018 CDG62_05330 507f4124f00354239a99c06ee3d21d35 431 Gene3D G3DSA:3.40.50.800 329 427 8.9E-24 T 23-10-2018 IPR036621 Anticodon-binding domain superfamily CDG62_05330 507f4124f00354239a99c06ee3d21d35 431 Gene3D G3DSA:3.30.930.10 196 328 2.4E-46 T 23-10-2018 CDG62_05330 507f4124f00354239a99c06ee3d21d35 431 Gene3D G3DSA:3.30.930.10 1 195 2.3E-72 T 23-10-2018 CDG62_05330 507f4124f00354239a99c06ee3d21d35 431 Pfam PF03129 Anticodon binding domain 346 426 5.1E-10 T 23-10-2018 IPR004154 Anticodon-binding CDG62_02855 5070334400422d027e2fc0677b76caef 166 Gene3D G3DSA:3.40.140.10 21 158 4.2E-11 T 23-10-2018 CDG62_02855 5070334400422d027e2fc0677b76caef 166 Pfam PF14464 Prokaryotic homologs of the JAB domain 37 143 5.4E-10 T 23-10-2018 IPR028090 JAB domain, prokaryotic CDG62_02855 5070334400422d027e2fc0677b76caef 166 SUPERFAMILY SSF102712 23 122 7.85E-8 T 23-10-2018 CDG62_15820 aa7d7328d0f94e93025c29f0802ab23e 107 SUPERFAMILY SSF54285 6 77 3.79E-17 T 23-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDG62_15820 aa7d7328d0f94e93025c29f0802ab23e 107 Gene3D G3DSA:3.10.20.280 2 88 2.8E-23 T 23-10-2018 IPR037021 RnfH superfamily CDG62_15820 aa7d7328d0f94e93025c29f0802ab23e 107 Pfam PF03658 RnfH family Ubiquitin 6 86 3.0E-23 T 23-10-2018 IPR005346 RnfH protein CDG62_15820 aa7d7328d0f94e93025c29f0802ab23e 107 Hamap MF_00460 Protein RnfH [rnfH]. 5 94 19.038 T 23-10-2018 IPR005346 RnfH protein CDG62_06105 ff74129cd668e6db40e2e4f2c0326dbe 221 SUPERFAMILY SSF55120 13 216 3.2E-58 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_06105 ff74129cd668e6db40e2e4f2c0326dbe 221 Pfam PF00849 RNA pseudouridylate synthase 24 171 2.2E-29 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_06105 ff74129cd668e6db40e2e4f2c0326dbe 221 Gene3D G3DSA:3.30.2350.10 7 219 1.0E-65 T 23-10-2018 CDG62_03610 bc5cf9bca45abebdc2f0279c316b5b50 568 Gene3D G3DSA:3.10.310.30 319 450 1.1E-32 T 23-10-2018 CDG62_03610 bc5cf9bca45abebdc2f0279c316b5b50 568 Pfam PF02272 DHHA1 domain 314 445 9.7E-25 T 23-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CDG62_03610 bc5cf9bca45abebdc2f0279c316b5b50 568 Gene3D G3DSA:3.90.1640.30 46 318 3.1E-88 T 23-10-2018 CDG62_03610 bc5cf9bca45abebdc2f0279c316b5b50 568 Pfam PF01368 DHH family 71 203 7.2E-11 T 23-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CDG62_03610 bc5cf9bca45abebdc2f0279c316b5b50 568 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 22 562 3.4E-153 T 23-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CDG62_03610 bc5cf9bca45abebdc2f0279c316b5b50 568 SUPERFAMILY SSF64182 52 449 1.09E-110 T 23-10-2018 IPR038763 DHH phosphoesterase superfamily CDG62_04765 29c80cc243e2940f266d213d82a1b210 131 Pfam PF00410 Ribosomal protein S8 5 130 2.7E-48 T 23-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04765 29c80cc243e2940f266d213d82a1b210 131 Gene3D G3DSA:3.30.1370.30 2 73 3.0E-28 T 23-10-2018 CDG62_04765 29c80cc243e2940f266d213d82a1b210 131 SUPERFAMILY SSF56047 2 130 3.53E-46 T 23-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04765 29c80cc243e2940f266d213d82a1b210 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 23-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04765 29c80cc243e2940f266d213d82a1b210 131 Gene3D G3DSA:3.30.1490.10 74 130 2.3E-21 T 23-10-2018 CDG62_04765 29c80cc243e2940f266d213d82a1b210 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 30.419 T 23-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_12790 b5001fdff711865e71931dff13c946e4 442 Pfam PF01554 MatE 234 390 2.3E-10 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG62_12790 b5001fdff711865e71931dff13c946e4 442 Pfam PF01554 MatE 10 166 3.3E-18 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG62_18750 2206c93279d07dc8fb21af6d8e44d6c5 510 Gene3D G3DSA:1.20.200.10 199 499 2.3E-94 T 23-10-2018 CDG62_18750 2206c93279d07dc8fb21af6d8e44d6c5 510 SUPERFAMILY SSF48557 2 501 1.41E-165 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 CDG62_18750 2206c93279d07dc8fb21af6d8e44d6c5 510 Pfam PF00221 Aromatic amino acid lyase 9 469 5.6E-156 T 23-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 CDG62_18750 2206c93279d07dc8fb21af6d8e44d6c5 510 Gene3D G3DSA:1.10.275.10 1 198 3.7E-59 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal CDG62_18750 2206c93279d07dc8fb21af6d8e44d6c5 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 23-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 CDG62_02300 3b00c413ed10bbfd92a016e4973ab07a 507 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 485 8.3E-85 T 23-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 CDG62_02300 3b00c413ed10bbfd92a016e4973ab07a 507 SUPERFAMILY SSF53335 10 506 3.16E-132 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_02300 3b00c413ed10bbfd92a016e4973ab07a 507 Pfam PF02384 N-6 DNA Methylase 163 470 4.2E-106 T 23-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CDG62_02300 3b00c413ed10bbfd92a016e4973ab07a 507 Gene3D G3DSA:3.40.50.150 184 465 1.9E-87 T 23-10-2018 CDG62_02300 3b00c413ed10bbfd92a016e4973ab07a 507 Pfam PF12161 HsdM N-terminal domain 11 148 1.9E-20 T 23-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CDG62_02300 3b00c413ed10bbfd92a016e4973ab07a 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 287 299 3.3E-14 T 23-10-2018 CDG62_02300 3b00c413ed10bbfd92a016e4973ab07a 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 186 202 3.3E-14 T 23-10-2018 CDG62_02300 3b00c413ed10bbfd92a016e4973ab07a 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 224 3.3E-14 T 23-10-2018 CDG62_02300 3b00c413ed10bbfd92a016e4973ab07a 507 Gene3D G3DSA:1.20.1260.30 2 180 7.2E-33 T 23-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CDG62_14005 b3873978540cd26fc09502adce1f6ee6 610 Gene3D G3DSA:3.90.228.20 241 600 2.6E-255 T 23-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CDG62_14005 b3873978540cd26fc09502adce1f6ee6 610 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 18 237 7.3E-99 T 23-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CDG62_14005 b3873978540cd26fc09502adce1f6ee6 610 PIRSF PIRSF001348 1 609 1.1E-265 T 23-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CDG62_14005 b3873978540cd26fc09502adce1f6ee6 610 Gene3D G3DSA:3.40.449.10 17 240 2.6E-255 T 23-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CDG62_14005 b3873978540cd26fc09502adce1f6ee6 610 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 6 607 50.207 T 23-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CDG62_14005 b3873978540cd26fc09502adce1f6ee6 610 Gene3D G3DSA:2.170.8.10 53 394 2.6E-255 T 23-10-2018 CDG62_14005 b3873978540cd26fc09502adce1f6ee6 610 SUPERFAMILY SSF68923 4 240 4.39E-96 T 23-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CDG62_14005 b3873978540cd26fc09502adce1f6ee6 610 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 265 273 - T 23-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CDG62_14005 b3873978540cd26fc09502adce1f6ee6 610 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 241 602 1.0E-165 T 23-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CDG62_14005 b3873978540cd26fc09502adce1f6ee6 610 SUPERFAMILY SSF53795 241 606 8.93E-154 T 23-10-2018 CDG62_19045 a251976e75a9f7405526d92ce9eb2558 266 Pfam PF00005 ABC transporter 47 183 1.9E-32 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_19045 a251976e75a9f7405526d92ce9eb2558 266 SUPERFAMILY SSF52540 32 240 1.09E-64 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_19045 a251976e75a9f7405526d92ce9eb2558 266 Gene3D G3DSA:3.40.50.300 32 259 4.2E-63 T 23-10-2018 CDG62_19045 a251976e75a9f7405526d92ce9eb2558 266 SMART SM00382 56 233 6.5E-19 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 Gene3D G3DSA:3.40.50.720 221 462 1.4E-56 T 23-10-2018 CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 Gene3D G3DSA:3.40.50.720 24 219 9.1E-51 T 23-10-2018 CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 226 400 1.9E-4 T 23-10-2018 CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 344 360 7.8E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 297 308 7.8E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 370 389 7.8E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 244 7.8E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 390 407 7.8E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 423 443 7.8E-31 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 357 385 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 SUPERFAMILY SSF51735 222 457 8.01E-52 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 232 456 1.4E-42 T 23-10-2018 CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 350 358 3.5E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 297 308 3.5E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10385 942ef8d536300677fec0453a0bef06f0 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 370 389 3.5E-7 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_07045 c353fa488236049a3fca45e58980a342 107 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 5 95 1.2E-23 T 23-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 CDG62_07045 c353fa488236049a3fca45e58980a342 107 SUPERFAMILY SSF75471 3 96 1.83E-28 T 23-10-2018 IPR035920 YhbY-like superfamily CDG62_07045 c353fa488236049a3fca45e58980a342 107 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 87 1.8E-21 T 23-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CDG62_07045 c353fa488236049a3fca45e58980a342 107 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 12 86 2.0E-19 T 23-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CDG62_07045 c353fa488236049a3fca45e58980a342 107 Gene3D G3DSA:3.30.110.60 2 104 1.9E-31 T 23-10-2018 IPR035920 YhbY-like superfamily CDG62_07045 c353fa488236049a3fca45e58980a342 107 SMART SM01103 4 87 2.8E-39 T 23-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 53 286 6.9E-33 T 23-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 SUPERFAMILY SSF88946 19 126 9.81E-40 T 23-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 5 288 52.312 T 23-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 SUPERFAMILY SSF88659 201 287 3.92E-18 T 23-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 256 282 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 Pfam PF04545 Sigma-70, region 4 233 283 2.9E-15 T 23-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 Pfam PF04542 Sigma-70 region 2 57 126 2.7E-16 T 23-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 Gene3D G3DSA:1.10.601.10 19 129 3.3E-27 T 23-10-2018 CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 81 94 - T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 19 287 5.3E-122 T 23-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 PRINTS PR00046 Major sigma-70 factor signature 256 271 9.7E-18 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 PRINTS PR00046 Major sigma-70 factor signature 237 249 9.7E-18 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 PRINTS PR00046 Major sigma-70 factor signature 81 94 9.7E-18 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 PRINTS PR00046 Major sigma-70 factor signature 271 282 9.7E-18 T 23-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 Gene3D G3DSA:1.10.10.10 213 288 4.6E-14 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_08210 1a44439d09a978b344365fd20bcb7d4c 289 Pfam PF00140 Sigma-70 factor, region 1.2 20 44 1.1E-5 T 23-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CDG62_11000 1e0df0a52d9c5f251e566348131bbe91 257 SUPERFAMILY SSF53474 5 252 7.22E-42 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_11000 1e0df0a52d9c5f251e566348131bbe91 257 Gene3D G3DSA:3.40.50.1820 5 253 1.7E-59 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_11000 1e0df0a52d9c5f251e566348131bbe91 257 Pfam PF12697 Alpha/beta hydrolase family 18 243 2.4E-15 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_10055 daac1c73716c9fa47b7b99db10c3990c 241 Gene3D G3DSA:3.10.290.10 1 57 8.1E-9 T 23-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 CDG62_10055 daac1c73716c9fa47b7b99db10c3990c 241 SMART SM00363 1 69 0.0013 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_10055 daac1c73716c9fa47b7b99db10c3990c 241 Pfam PF00849 RNA pseudouridylate synthase 62 193 1.0E-16 T 23-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_10055 daac1c73716c9fa47b7b99db10c3990c 241 Gene3D G3DSA:3.30.70.1560 129 210 3.8E-49 T 23-10-2018 CDG62_10055 daac1c73716c9fa47b7b99db10c3990c 241 Gene3D G3DSA:3.30.70.580 62 229 3.8E-49 T 23-10-2018 CDG62_10055 daac1c73716c9fa47b7b99db10c3990c 241 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 23-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDG62_10055 daac1c73716c9fa47b7b99db10c3990c 241 SUPERFAMILY SSF55174 3 89 2.09E-11 T 23-10-2018 CDG62_10055 daac1c73716c9fa47b7b99db10c3990c 241 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 1.2E-38 T 23-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CDG62_10055 daac1c73716c9fa47b7b99db10c3990c 241 Pfam PF01479 S4 domain 3 42 1.5E-6 T 23-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_10055 daac1c73716c9fa47b7b99db10c3990c 241 SUPERFAMILY SSF55120 61 230 1.47E-36 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_15180 60688694ed9f9b49526f156233dedd3a 750 SUPERFAMILY SSF56935 50 750 1.65E-82 T 23-10-2018 CDG62_15180 60688694ed9f9b49526f156233dedd3a 750 Gene3D G3DSA:2.40.170.20 203 750 4.7E-103 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_15180 60688694ed9f9b49526f156233dedd3a 750 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 61 750 1.2E-103 T 23-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 CDG62_15180 60688694ed9f9b49526f156233dedd3a 750 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 179 3.9E-12 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_15180 60688694ed9f9b49526f156233dedd3a 750 Pfam PF00593 TonB dependent receptor 271 749 2.3E-40 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_15180 60688694ed9f9b49526f156233dedd3a 750 Gene3D G3DSA:2.170.130.10 65 200 3.1E-15 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_18310 46ff033820b60968e15e3c1fa24fe59d 439 SUPERFAMILY SSF103473 7 437 1.44E-92 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_18310 46ff033820b60968e15e3c1fa24fe59d 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 320 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_18310 46ff033820b60968e15e3c1fa24fe59d 439 Gene3D G3DSA:1.20.1250.20 12 439 1.2E-94 T 23-10-2018 CDG62_18310 46ff033820b60968e15e3c1fa24fe59d 439 Pfam PF00083 Sugar (and other) transporter 53 437 1.4E-45 T 23-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CDG62_18310 46ff033820b60968e15e3c1fa24fe59d 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_18310 46ff033820b60968e15e3c1fa24fe59d 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 89 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_09005 8668ea8797c23a57fe4e0c390999a6ab 274 Pfam PF01148 Cytidylyltransferase family 3 264 1.7E-60 T 23-10-2018 CDG62_09005 8668ea8797c23a57fe4e0c390999a6ab 274 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 225 251 - T 23-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 CDG62_03605 90900550b2a754e13e2b946b638b9085 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 3.4E-18 T 23-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDG62_03605 90900550b2a754e13e2b946b638b9085 218 Gene3D G3DSA:2.30.110.10 5 218 1.4E-74 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CDG62_03605 90900550b2a754e13e2b946b638b9085 218 SUPERFAMILY SSF50475 15 218 8.48E-58 T 23-10-2018 CDG62_03605 90900550b2a754e13e2b946b638b9085 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 7 218 4.4E-76 T 23-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDG62_03605 90900550b2a754e13e2b946b638b9085 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 123 4.4E-23 T 23-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDG62_03605 90900550b2a754e13e2b946b638b9085 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 23-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDG62_03605 90900550b2a754e13e2b946b638b9085 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 14 218 35.556 T 23-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDG62_03605 90900550b2a754e13e2b946b638b9085 218 PIRSF PIRSF000190 1 218 1.8E-73 T 23-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CDG62_12990 ce9c7a7fffbad5d519166e04b4d2e9ee 266 SUPERFAMILY SSF52096 9 264 1.68E-60 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_12990 ce9c7a7fffbad5d519166e04b4d2e9ee 266 Gene3D G3DSA:3.90.226.10 10 191 1.2E-53 T 23-10-2018 CDG62_12990 ce9c7a7fffbad5d519166e04b4d2e9ee 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 264 8.2E-38 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDG62_12990 ce9c7a7fffbad5d519166e04b4d2e9ee 266 Gene3D G3DSA:1.10.12.10 210 255 2.0E-21 T 23-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDG62_16505 011561bd82487ef35c79f3d4fe8593ac 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 23-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDG62_16505 011561bd82487ef35c79f3d4fe8593ac 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 220 3.6E-42 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDG62_16505 011561bd82487ef35c79f3d4fe8593ac 262 Gene3D G3DSA:3.90.226.10 2 250 1.7E-66 T 23-10-2018 CDG62_16505 011561bd82487ef35c79f3d4fe8593ac 262 SUPERFAMILY SSF52096 3 243 2.02E-65 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_13875 12e9032de98a35f85057a42cc8ec3fc9 313 SUPERFAMILY SSF53187 57 307 4.57E-40 T 23-10-2018 CDG62_13875 12e9032de98a35f85057a42cc8ec3fc9 313 Pfam PF04389 Peptidase family M28 91 304 1.9E-26 T 23-10-2018 IPR007484 Peptidase M28 CDG62_13875 12e9032de98a35f85057a42cc8ec3fc9 313 Gene3D G3DSA:3.40.630.10 18 312 6.6E-53 T 23-10-2018 CDG62_14940 7bebbbe4a45193365fb9bdcc23ad0b51 137 SUPERFAMILY SSF52206 28 131 4.05E-26 T 23-10-2018 IPR036490 Hypothetical protein MTH538 superfamily CDG62_14940 7bebbbe4a45193365fb9bdcc23ad0b51 137 Gene3D G3DSA:3.40.50.9200 2 133 1.8E-22 T 23-10-2018 IPR036490 Hypothetical protein MTH538 superfamily CDG62_14940 7bebbbe4a45193365fb9bdcc23ad0b51 137 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 3 105 1.7E-16 T 23-10-2018 IPR015032 MTH538 TIR-like domain CDG62_03330 ae79e090649bdac762ce11085acfa4b1 232 Gene3D G3DSA:1.10.357.10 80 216 4.9E-11 T 23-10-2018 CDG62_03330 ae79e090649bdac762ce11085acfa4b1 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 37 81 4.5E-6 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_03330 ae79e090649bdac762ce11085acfa4b1 232 Gene3D G3DSA:1.10.10.60 5 79 1.5E-11 T 23-10-2018 CDG62_03330 ae79e090649bdac762ce11085acfa4b1 232 SUPERFAMILY SSF46689 27 103 1.54E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_02765 6547648ba11b86dc807dbd964ecb670d 95 Gene3D G3DSA:3.10.450.530 1 90 2.5E-18 T 23-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily CDG62_02765 6547648ba11b86dc807dbd964ecb670d 95 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 7 88 7.8E-27 T 23-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system CDG62_03640 5b6a108b79b2a4d1af967242769b4b56 426 SUPERFAMILY SSF53756 177 408 7.53E-9 T 23-10-2018 CDG62_03640 5b6a108b79b2a4d1af967242769b4b56 426 Pfam PF00534 Glycosyl transferases group 1 254 406 2.0E-7 T 23-10-2018 IPR001296 Glycosyl transferase, family 1 CDG62_03640 5b6a108b79b2a4d1af967242769b4b56 426 Gene3D G3DSA:3.40.50.11720 31 213 5.2E-44 T 23-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CDG62_03640 5b6a108b79b2a4d1af967242769b4b56 426 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 37 215 1.4E-55 T 23-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CDG62_03640 5b6a108b79b2a4d1af967242769b4b56 426 Gene3D G3DSA:3.40.50.2000 219 410 2.2E-62 T 23-10-2018 CDG62_08995 7f2a75a483c01379b26b0ebdd16358dd 184 SUPERFAMILY SSF55194 1 184 3.27E-64 T 23-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 CDG62_08995 7f2a75a483c01379b26b0ebdd16358dd 184 Pfam PF01765 Ribosome recycling factor 21 182 3.1E-56 T 23-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CDG62_08995 7f2a75a483c01379b26b0ebdd16358dd 184 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 184 8.5E-63 T 23-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CDG62_08995 7f2a75a483c01379b26b0ebdd16358dd 184 Gene3D G3DSA:1.10.132.20 12 181 1.7E-59 T 23-10-2018 CDG62_08995 7f2a75a483c01379b26b0ebdd16358dd 184 Gene3D G3DSA:3.30.1360.40 31 104 1.7E-59 T 23-10-2018 CDG62_08995 7f2a75a483c01379b26b0ebdd16358dd 184 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 184 24.747 T 23-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CDG62_14910 798f55d69902148a5b0eaeb4a59e56af 285 PIRSF PIRSF038471 4 285 1.7E-63 T 23-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CDG62_14910 798f55d69902148a5b0eaeb4a59e56af 285 Gene3D G3DSA:2.40.10.350 182 259 1.3E-34 T 23-10-2018 CDG62_14910 798f55d69902148a5b0eaeb4a59e56af 285 Pfam PF04085 rod shape-determining protein MreC 125 271 2.1E-35 T 23-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CDG62_14910 798f55d69902148a5b0eaeb4a59e56af 285 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 6 275 4.3E-47 T 23-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CDG62_14910 798f55d69902148a5b0eaeb4a59e56af 285 Gene3D G3DSA:2.40.10.340 123 270 1.3E-34 T 23-10-2018 CDG62_00350 97c21e9752ab7f00a91eea3cb88b04f4 285 SUPERFAMILY SSF53955 85 284 3.94E-35 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG62_00350 97c21e9752ab7f00a91eea3cb88b04f4 285 Pfam PF00182 Chitinase class I 188 247 3.5E-6 T 23-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CDG62_00350 97c21e9752ab7f00a91eea3cb88b04f4 285 Gene3D G3DSA:1.10.530.70 72 282 1.5E-18 T 23-10-2018 CDG62_14285 1a433a2d5b343ed22252b67a94381f11 192 Gene3D G3DSA:1.10.357.10 3 184 5.0E-33 T 23-10-2018 CDG62_14285 1a433a2d5b343ed22252b67a94381f11 192 Pfam PF16925 Bacterial transcriptional repressor C-terminal 100 183 6.3E-9 T 23-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDG62_14285 1a433a2d5b343ed22252b67a94381f11 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 56 4.7E-13 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_14285 1a433a2d5b343ed22252b67a94381f11 192 SUPERFAMILY SSF48498 99 183 5.06E-13 T 23-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CDG62_14285 1a433a2d5b343ed22252b67a94381f11 192 SUPERFAMILY SSF46689 5 74 1.15E-14 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_13020 529a81c6c7929e018b1ef922f518b4ef 446 Gene3D G3DSA:1.10.3410.10 245 356 2.0E-138 T 23-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 CDG62_13020 529a81c6c7929e018b1ef922f518b4ef 446 SMART SM00471 59 261 2.9E-7 T 23-10-2018 IPR003607 HD/PDEase domain CDG62_13020 529a81c6c7929e018b1ef922f518b4ef 446 Pfam PF01966 HD domain 63 139 2.6E-8 T 23-10-2018 IPR006674 HD domain CDG62_13020 529a81c6c7929e018b1ef922f518b4ef 446 Gene3D G3DSA:1.10.3210.10 28 244 2.0E-138 T 23-10-2018 CDG62_13020 529a81c6c7929e018b1ef922f518b4ef 446 SUPERFAMILY SSF109604 25 385 1.74E-62 T 23-10-2018 CDG62_13020 529a81c6c7929e018b1ef922f518b4ef 446 Gene3D G3DSA:1.10.3550.10 114 429 2.0E-138 T 23-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal CDG62_13020 529a81c6c7929e018b1ef922f518b4ef 446 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 26 438 1.0E-94 T 23-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 CDG62_05435 956ab9f10af113c7f02109f928728132 323 Pfam PF11380 Stealth protein CR2, conserved region 2 39 151 3.2E-30 T 23-10-2018 IPR021520 Stealth protein CR2, conserved region 2 GO:0016772 CDG62_05435 956ab9f10af113c7f02109f928728132 323 Pfam PF17101 Stealth protein CR1, conserved region 1 3 28 1.2E-8 T 23-10-2018 IPR031358 Stealth protein CR1, conserved region 1 CDG62_08625 0711c1c699c5843c6527988d8aa450c0 295 Pfam PF01758 Sodium Bile acid symporter family 12 195 7.5E-28 T 23-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CDG62_08625 0711c1c699c5843c6527988d8aa450c0 295 Gene3D G3DSA:1.20.1530.20 2 282 7.0E-68 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG62_04580 37186f4ecfc6b58493adb88bf6b0cbfb 224 Pfam PF02470 MlaD protein 39 164 4.9E-30 T 23-10-2018 IPR003399 Mce/MlaD CDG62_05720 f4cf964c4c46779982f3fd47b138ae68 159 PRINTS PR01021 OMPA domain signature 57 79 6.4E-15 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_05720 f4cf964c4c46779982f3fd47b138ae68 159 PRINTS PR01021 OMPA domain signature 102 118 6.4E-15 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_05720 f4cf964c4c46779982f3fd47b138ae68 159 PRINTS PR01021 OMPA domain signature 87 102 6.4E-15 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_05720 f4cf964c4c46779982f3fd47b138ae68 159 Pfam PF00691 OmpA family 56 151 1.0E-21 T 23-10-2018 IPR006665 OmpA-like domain CDG62_05720 f4cf964c4c46779982f3fd47b138ae68 159 Gene3D G3DSA:3.30.1330.60 24 158 3.1E-40 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG62_05720 f4cf964c4c46779982f3fd47b138ae68 159 SUPERFAMILY SSF103088 43 159 1.44E-33 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG62_06855 89bd86ca4baad9548c9c934baf63913e 163 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 158 4.0E-57 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDG62_06855 89bd86ca4baad9548c9c934baf63913e 163 Pfam PF01467 Cytidylyltransferase-like 7 135 1.8E-20 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDG62_06855 89bd86ca4baad9548c9c934baf63913e 163 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 160 34.915 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDG62_06855 89bd86ca4baad9548c9c934baf63913e 163 Gene3D G3DSA:3.40.50.620 1 163 1.8E-58 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_06855 89bd86ca4baad9548c9c934baf63913e 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 64 8.1E-18 T 23-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CDG62_06855 89bd86ca4baad9548c9c934baf63913e 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 5.4E-48 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDG62_06855 89bd86ca4baad9548c9c934baf63913e 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 5.4E-48 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDG62_06855 89bd86ca4baad9548c9c934baf63913e 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 5.4E-48 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDG62_06855 89bd86ca4baad9548c9c934baf63913e 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 5.4E-48 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDG62_06855 89bd86ca4baad9548c9c934baf63913e 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 5.4E-48 T 23-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CDG62_06855 89bd86ca4baad9548c9c934baf63913e 163 SUPERFAMILY SSF52374 3 158 1.69E-44 T 23-10-2018 CDG62_15240 0c3146b7bf4f4f3259ad3c3045f96bde 420 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_15240 0c3146b7bf4f4f3259ad3c3045f96bde 420 SUPERFAMILY SSF53383 26 413 1.13E-124 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_15240 0c3146b7bf4f4f3259ad3c3045f96bde 420 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 11 414 1.2E-174 T 23-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 CDG62_15240 0c3146b7bf4f4f3259ad3c3045f96bde 420 Gene3D G3DSA:3.90.1150.10 7 411 1.6E-147 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_15240 0c3146b7bf4f4f3259ad3c3045f96bde 420 Gene3D G3DSA:3.40.640.10 60 319 1.6E-147 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_15240 0c3146b7bf4f4f3259ad3c3045f96bde 420 PIRSF PIRSF000521 125 415 3.2E-44 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_15240 0c3146b7bf4f4f3259ad3c3045f96bde 420 PIRSF PIRSF000521 4 131 5.8E-5 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_15240 0c3146b7bf4f4f3259ad3c3045f96bde 420 Pfam PF00202 Aminotransferase class-III 26 412 1.0E-124 T 23-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CDG62_16905 14ccb4e505c0aaa48a9c83552e096627 152 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.4E-17 T 23-10-2018 CDG62_16905 14ccb4e505c0aaa48a9c83552e096627 152 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.4E-17 T 23-10-2018 CDG62_16905 14ccb4e505c0aaa48a9c83552e096627 152 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.4E-17 T 23-10-2018 CDG62_16905 14ccb4e505c0aaa48a9c83552e096627 152 Pfam PF02416 mttA/Hcf106 family 4 49 8.8E-9 T 23-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CDG62_16905 14ccb4e505c0aaa48a9c83552e096627 152 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 79 7.0E-24 T 23-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CDG62_16905 14ccb4e505c0aaa48a9c83552e096627 152 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 137 14.736 T 23-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CDG62_05585 6abb1840cf93af96ffa860857fb55595 240 Gene3D G3DSA:3.20.20.190 1 239 1.3E-51 T 23-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CDG62_05585 6abb1840cf93af96ffa860857fb55595 240 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 230 3.7E-30 T 23-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CDG62_05585 6abb1840cf93af96ffa860857fb55595 240 SUPERFAMILY SSF51695 1 235 7.59E-49 T 23-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CDG62_10190 ee1908ec309ff7694ef7a2fbda0072d8 316 Gene3D G3DSA:1.10.40.60 209 276 3.2E-68 T 23-10-2018 IPR038072 GspK, central domain superfamily CDG62_10190 ee1908ec309ff7694ef7a2fbda0072d8 316 SUPERFAMILY SSF158544 102 206 1.05E-28 T 23-10-2018 IPR038072 GspK, central domain superfamily CDG62_10190 ee1908ec309ff7694ef7a2fbda0072d8 316 SUPERFAMILY SSF54523 38 311 2.67E-19 T 23-10-2018 CDG62_10190 ee1908ec309ff7694ef7a2fbda0072d8 316 Pfam PF03934 Type II secretion system (T2SS), protein K 31 306 4.0E-73 T 23-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CDG62_10190 ee1908ec309ff7694ef7a2fbda0072d8 316 Gene3D G3DSA:3.30.1300.30 43 301 3.2E-68 T 23-10-2018 CDG62_10190 ee1908ec309ff7694ef7a2fbda0072d8 316 Gene3D G3DSA:1.10.40.60 100 208 3.2E-68 T 23-10-2018 IPR038072 GspK, central domain superfamily CDG62_10190 ee1908ec309ff7694ef7a2fbda0072d8 316 PIRSF PIRSF002786 2 315 1.1E-90 T 23-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CDG62_15585 80eb8a9c96e77a9879116f427407f9bf 349 Pfam PF02353 Mycolic acid cyclopropane synthetase 67 329 6.8E-41 T 23-10-2018 CDG62_15585 80eb8a9c96e77a9879116f427407f9bf 349 SUPERFAMILY SSF53335 70 339 2.3E-54 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_15585 80eb8a9c96e77a9879116f427407f9bf 349 Gene3D G3DSA:3.40.50.150 56 341 1.7E-71 T 23-10-2018 CDG62_00250 cca8198a7ab5763b6cfb1e1c2d5e2fa3 113 Pfam PF01381 Helix-turn-helix 16 67 2.8E-8 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_00250 cca8198a7ab5763b6cfb1e1c2d5e2fa3 113 Gene3D G3DSA:1.10.260.40 7 71 2.3E-12 T 23-10-2018 CDG62_00250 cca8198a7ab5763b6cfb1e1c2d5e2fa3 113 SUPERFAMILY SSF47413 10 74 6.76E-12 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG62_00250 cca8198a7ab5763b6cfb1e1c2d5e2fa3 113 SMART SM00530 15 70 4.0E-8 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_09085 79408c2c54c475262a5248a90724eac4 284 Gene3D G3DSA:3.30.540.10 11 153 3.7E-32 T 23-10-2018 CDG62_09085 79408c2c54c475262a5248a90724eac4 284 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 12 266 33.45 T 23-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 CDG62_09085 79408c2c54c475262a5248a90724eac4 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 92 108 5.9E-13 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG62_09085 79408c2c54c475262a5248a90724eac4 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 49 69 5.9E-13 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG62_09085 79408c2c54c475262a5248a90724eac4 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 221 245 5.9E-13 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG62_09085 79408c2c54c475262a5248a90724eac4 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 71 87 5.9E-13 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG62_09085 79408c2c54c475262a5248a90724eac4 284 Pfam PF00459 Inositol monophosphatase family 16 258 3.4E-41 T 23-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CDG62_09085 79408c2c54c475262a5248a90724eac4 284 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 92 105 - T 23-10-2018 IPR020583 Inositol monophosphatase, metal-binding site CDG62_09085 79408c2c54c475262a5248a90724eac4 284 SUPERFAMILY SSF56655 13 277 2.36E-58 T 23-10-2018 CDG62_09085 79408c2c54c475262a5248a90724eac4 284 Gene3D G3DSA:3.40.190.80 159 269 3.7E-26 T 23-10-2018 CDG62_07615 58106377702a1fa379827fbef144c644 260 Gene3D G3DSA:3.40.190.10 34 253 2.3E-77 T 23-10-2018 CDG62_07615 58106377702a1fa379827fbef144c644 260 Gene3D G3DSA:3.40.190.10 110 219 2.3E-77 T 23-10-2018 CDG62_07615 58106377702a1fa379827fbef144c644 260 Pfam PF13531 Bacterial extracellular solute-binding protein 32 253 1.2E-43 T 23-10-2018 CDG62_07615 58106377702a1fa379827fbef144c644 260 SUPERFAMILY SSF53850 31 254 1.48E-65 T 23-10-2018 CDG62_07615 58106377702a1fa379827fbef144c644 260 PIRSF PIRSF004846 2 257 9.2E-74 T 23-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 CDG62_07615 58106377702a1fa379827fbef144c644 260 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 37 252 1.0E-62 T 23-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 CDG62_06655 a6b9d299319c7aa0fd6db127797a99db 159 SUPERFAMILY SSF75217 2 157 1.64E-41 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG62_06655 a6b9d299319c7aa0fd6db127797a99db 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 30.894 T 23-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 CDG62_06655 a6b9d299319c7aa0fd6db127797a99db 159 Gene3D G3DSA:3.40.1280.10 1 158 2.6E-58 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG62_06655 a6b9d299319c7aa0fd6db127797a99db 159 PIRSF PIRSF029256 1 159 2.0E-59 T 23-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 CDG62_06655 a6b9d299319c7aa0fd6db127797a99db 159 Pfam PF00588 SpoU rRNA Methylase family 2 147 1.0E-35 T 23-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CDG62_06770 0bb09615f5c49fb0ab0db62cd5728a15 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 181 34.543 T 23-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CDG62_06770 0bb09615f5c49fb0ab0db62cd5728a15 193 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 7.2E-53 T 23-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CDG62_06770 0bb09615f5c49fb0ab0db62cd5728a15 193 Gene3D G3DSA:3.40.50.1470 1 193 1.1E-73 T 23-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 CDG62_06770 0bb09615f5c49fb0ab0db62cd5728a15 193 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 23-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CDG62_06770 0bb09615f5c49fb0ab0db62cd5728a15 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 188 5.6E-64 T 23-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CDG62_06770 0bb09615f5c49fb0ab0db62cd5728a15 193 SUPERFAMILY SSF53178 5 192 5.89E-68 T 23-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 CDG62_06770 0bb09615f5c49fb0ab0db62cd5728a15 193 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 23-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CDG62_17765 248cb4415457b53b5a0d08fe2a22c4b9 256 SUPERFAMILY SSF46785 4 73 2.3E-8 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_17765 248cb4415457b53b5a0d08fe2a22c4b9 256 Gene3D G3DSA:3.30.450.40 76 241 1.5E-17 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG62_17765 248cb4415457b53b5a0d08fe2a22c4b9 256 SUPERFAMILY SSF55781 80 246 1.37E-21 T 23-10-2018 CDG62_17765 248cb4415457b53b5a0d08fe2a22c4b9 256 Gene3D G3DSA:1.10.10.10 2 75 1.6E-11 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_17765 248cb4415457b53b5a0d08fe2a22c4b9 256 Pfam PF01614 Bacterial transcriptional regulator 129 246 1.9E-12 T 23-10-2018 IPR014757 Transcription regulator IclR, C-terminal CDG62_17765 248cb4415457b53b5a0d08fe2a22c4b9 256 Pfam PF02082 Transcriptional regulator 8 67 1.2E-4 T 23-10-2018 IPR000944 Transcription regulator Rrf2-type CDG62_06815 5b18a92a574f304aaabe7efa935f1c71 569 Gene3D G3DSA:1.25.40.10 248 329 3.7E-6 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_06815 5b18a92a574f304aaabe7efa935f1c71 569 SUPERFAMILY SSF48452 383 552 1.9E-13 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_06815 5b18a92a574f304aaabe7efa935f1c71 569 Gene3D G3DSA:1.25.40.10 428 568 2.6E-14 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_06815 5b18a92a574f304aaabe7efa935f1c71 569 SMART SM00028 381 414 38.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG62_06815 5b18a92a574f304aaabe7efa935f1c71 569 SMART SM00028 112 145 37.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG62_06815 5b18a92a574f304aaabe7efa935f1c71 569 SMART SM00028 484 517 160.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG62_06815 5b18a92a574f304aaabe7efa935f1c71 569 SMART SM00028 178 211 33.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG62_06815 5b18a92a574f304aaabe7efa935f1c71 569 SMART SM00028 212 245 320.0 T 23-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CDG62_06815 5b18a92a574f304aaabe7efa935f1c71 569 Gene3D G3DSA:1.25.40.10 345 424 5.3E-5 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_06815 5b18a92a574f304aaabe7efa935f1c71 569 SUPERFAMILY SSF48452 56 372 3.41E-13 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_06815 5b18a92a574f304aaabe7efa935f1c71 569 Gene3D G3DSA:1.25.40.10 46 247 5.4E-11 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_06255 cae75b04ee5d18744a0d71edb0b729b7 248 Gene3D G3DSA:3.40.50.1820 8 248 8.4E-15 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_06255 cae75b04ee5d18744a0d71edb0b729b7 248 SUPERFAMILY SSF53474 13 246 4.77E-11 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_06255 cae75b04ee5d18744a0d71edb0b729b7 248 Pfam PF05728 Uncharacterised protein family (UPF0227) 52 131 3.5E-4 T 23-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CDG62_07620 3f610aa966d0261f8ca47bfb80d8bf65 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 15 220 4.0E-65 T 23-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CDG62_07620 3f610aa966d0261f8ca47bfb80d8bf65 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 222 6.1E-20 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_07620 3f610aa966d0261f8ca47bfb80d8bf65 230 SUPERFAMILY SSF161098 10 220 2.09E-45 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_07620 3f610aa966d0261f8ca47bfb80d8bf65 230 Gene3D G3DSA:1.10.3720.10 2 226 2.7E-51 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_16260 f9620127082926540ae248297739e409 173 PIRSF PIRSF029548 1 160 1.4E-33 T 23-10-2018 IPR014557 Uncharacterised conserved protein UCP029548, STAS-type CDG62_16260 f9620127082926540ae248297739e409 173 Gene3D G3DSA:3.30.750.24 4 108 4.7E-11 T 23-10-2018 IPR036513 STAS domain superfamily CDG62_16260 f9620127082926540ae248297739e409 173 SUPERFAMILY SSF52091 8 105 4.32E-12 T 23-10-2018 IPR036513 STAS domain superfamily CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 Pfam PF00873 AcrB/AcrD/AcrF family 6 1036 0.0 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82693 41 135 1.15E-27 T 23-10-2018 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:3.30.2090.10 730 818 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82693 681 866 5.75E-28 T 23-10-2018 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:1.20.1640.10 11 521 0.0 T 23-10-2018 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:3.30.2090.10 182 278 0.0 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82866 299 499 7.59E-51 T 23-10-2018 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:1.20.1640.10 522 1032 0.0 T 23-10-2018 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:3.30.70.1440 678 875 0.0 T 23-10-2018 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82866 840 1035 5.75E-45 T 23-10-2018 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.4E-88 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.4E-88 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 630 644 1.4E-88 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.4E-88 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 561 578 1.4E-88 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.4E-88 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.4E-88 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.4E-88 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.4E-88 T 23-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 5 1047 0.0 T 23-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82714 186 275 2.35E-20 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82693 574 680 8.2E-26 T 23-10-2018 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82714 731 816 7.06E-21 T 23-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82693 138 332 7.15E-27 T 23-10-2018 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:3.30.70.1430 41 826 0.0 T 23-10-2018 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:3.30.70.1320 136 335 0.0 T 23-10-2018 CDG62_01285 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:3.30.70.1430 576 677 0.0 T 23-10-2018 CDG62_10720 1fa7084f9d833220d284fce2ab6faa80 198 Pfam PF02132 RecR protein 41 77 3.6E-10 T 23-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger CDG62_10720 1fa7084f9d833220d284fce2ab6faa80 198 Pfam PF13662 Toprim domain 81 170 1.8E-24 T 23-10-2018 IPR006171 TOPRIM domain CDG62_10720 1fa7084f9d833220d284fce2ab6faa80 198 Gene3D G3DSA:1.10.8.420 2 51 1.1E-13 T 23-10-2018 CDG62_10720 1fa7084f9d833220d284fce2ab6faa80 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 93.364 T 23-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CDG62_10720 1fa7084f9d833220d284fce2ab6faa80 198 SUPERFAMILY SSF111304 3 197 4.58E-74 T 23-10-2018 IPR023627 Recombination protein RecR CDG62_10720 1fa7084f9d833220d284fce2ab6faa80 198 SMART SM00493 79 164 9.7E-17 T 23-10-2018 IPR006171 TOPRIM domain CDG62_10720 1fa7084f9d833220d284fce2ab6faa80 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 194 1.2E-72 T 23-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CDG62_10720 1fa7084f9d833220d284fce2ab6faa80 198 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 23-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 CDG62_10720 1fa7084f9d833220d284fce2ab6faa80 198 Gene3D G3DSA:3.40.1360.10 76 197 8.7E-44 T 23-10-2018 CDG62_07115 57e4e38c53b7f0e295a769afd62703f9 534 SUPERFAMILY SSF51621 8 515 2.42E-124 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDG62_07115 57e4e38c53b7f0e295a769afd62703f9 534 PIRSF PIRSF001362 2 277 7.4E-31 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDG62_07115 57e4e38c53b7f0e295a769afd62703f9 534 PIRSF PIRSF001362 281 410 7.8E-13 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDG62_07115 57e4e38c53b7f0e295a769afd62703f9 534 PIRSF PIRSF001362 415 534 1.1E-6 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDG62_07115 57e4e38c53b7f0e295a769afd62703f9 534 Pfam PF00463 Isocitrate lyase family 98 270 9.5E-25 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDG62_07115 57e4e38c53b7f0e295a769afd62703f9 534 Pfam PF00463 Isocitrate lyase family 317 396 6.2E-11 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDG62_07115 57e4e38c53b7f0e295a769afd62703f9 534 Pfam PF00463 Isocitrate lyase family 432 521 1.9E-10 T 23-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CDG62_05185 8762a60bac59c59e92a2c114027070ff 135 Pfam PF00581 Rhodanese-like domain 47 126 2.8E-12 T 23-10-2018 IPR001763 Rhodanese-like domain CDG62_05185 8762a60bac59c59e92a2c114027070ff 135 SMART SM00450 37 130 8.1E-14 T 23-10-2018 IPR001763 Rhodanese-like domain CDG62_05185 8762a60bac59c59e92a2c114027070ff 135 Gene3D G3DSA:3.40.250.10 37 134 5.0E-22 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG62_05185 8762a60bac59c59e92a2c114027070ff 135 SUPERFAMILY SSF52821 15 133 2.88E-25 T 23-10-2018 IPR036873 Rhodanese-like domain superfamily CDG62_11390 719e1b802d2c767057477fc3a1273da0 392 Gene3D G3DSA:1.20.1250.20 9 389 5.8E-53 T 23-10-2018 CDG62_11390 719e1b802d2c767057477fc3a1273da0 392 SUPERFAMILY SSF103473 11 391 4.97E-61 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_11390 719e1b802d2c767057477fc3a1273da0 392 Pfam PF07690 Major Facilitator Superfamily 22 351 4.8E-49 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_02295 993536deaf341f245fe8bed4b17072f8 206 Gene3D G3DSA:3.90.220.20 6 205 6.5E-26 T 23-10-2018 CDG62_02295 993536deaf341f245fe8bed4b17072f8 206 Pfam PF01420 Type I restriction modification DNA specificity domain 7 171 1.4E-8 T 23-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CDG62_02295 993536deaf341f245fe8bed4b17072f8 206 SUPERFAMILY SSF116734 8 204 2.29E-26 T 23-10-2018 CDG62_18775 9a7d764b177b772694e5a65fc52ec0b0 82 Gene3D G3DSA:1.10.1200.10 1 82 6.0E-18 T 23-10-2018 IPR036736 ACP-like superfamily CDG62_18775 9a7d764b177b772694e5a65fc52ec0b0 82 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 13.763 T 23-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CDG62_18775 9a7d764b177b772694e5a65fc52ec0b0 82 SUPERFAMILY SSF47336 3 79 2.36E-17 T 23-10-2018 IPR036736 ACP-like superfamily CDG62_18775 9a7d764b177b772694e5a65fc52ec0b0 82 Pfam PF00550 Phosphopantetheine attachment site 9 73 2.1E-11 T 23-10-2018 IPR009081 Phosphopantetheine binding ACP domain CDG62_09425 a07f80f8e4a48384a0601d49f878a2b2 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 7.6E-15 T 23-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CDG62_09425 a07f80f8e4a48384a0601d49f878a2b2 160 Gene3D G3DSA:3.10.50.40 4 154 4.0E-57 T 23-10-2018 CDG62_09425 a07f80f8e4a48384a0601d49f878a2b2 160 SUPERFAMILY SSF54534 4 140 3.34E-38 T 23-10-2018 CDG62_09425 a07f80f8e4a48384a0601d49f878a2b2 160 Gene3D G3DSA:2.40.10.330 71 121 4.0E-57 T 23-10-2018 CDG62_00595 67fa7fed51f2754e3a7072646c278ce6 310 Gene3D G3DSA:1.10.10.10 142 235 9.5E-31 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_00595 67fa7fed51f2754e3a7072646c278ce6 310 Pfam PF01051 Initiator Replication protein 3 227 5.7E-55 T 23-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CDG62_00595 67fa7fed51f2754e3a7072646c278ce6 310 SUPERFAMILY SSF46785 1 130 4.9E-32 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00595 67fa7fed51f2754e3a7072646c278ce6 310 SUPERFAMILY SSF46785 130 231 4.49E-32 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00595 67fa7fed51f2754e3a7072646c278ce6 310 Gene3D G3DSA:1.10.10.10 1 138 1.4E-39 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_08310 f6e9f8b6d3d75a62484900c3c763cf5b 222 Gene3D G3DSA:3.40.50.850 3 210 9.1E-47 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_08310 f6e9f8b6d3d75a62484900c3c763cf5b 222 SUPERFAMILY SSF52499 6 190 1.57E-41 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_08310 f6e9f8b6d3d75a62484900c3c763cf5b 222 Pfam PF00857 Isochorismatase family 14 165 6.4E-18 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 CDG62_05945 e55b8fa501de9422f501a9ebe92db373 117 Pfam PF00893 Small Multidrug Resistance protein 12 102 1.9E-12 T 23-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CDG62_05945 e55b8fa501de9422f501a9ebe92db373 117 Gene3D G3DSA:1.10.3730.20 11 116 1.3E-16 T 23-10-2018 CDG62_05945 e55b8fa501de9422f501a9ebe92db373 117 SUPERFAMILY SSF103481 14 113 4.84E-12 T 23-10-2018 CDG62_14765 681925d7b735fd35f2bd2121c30e8cfc 396 Gene3D G3DSA:3.10.310.10 11 388 1.8E-151 T 23-10-2018 CDG62_14765 681925d7b735fd35f2bd2121c30e8cfc 396 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 5 394 2.5E-229 T 23-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 CDG62_14765 681925d7b735fd35f2bd2121c30e8cfc 396 SUPERFAMILY SSF54506 189 393 1.55E-76 T 23-10-2018 CDG62_14765 681925d7b735fd35f2bd2121c30e8cfc 396 Gene3D G3DSA:3.10.310.10 181 374 1.8E-151 T 23-10-2018 CDG62_14765 681925d7b735fd35f2bd2121c30e8cfc 396 SUPERFAMILY SSF54506 2 182 2.04E-71 T 23-10-2018 CDG62_14765 681925d7b735fd35f2bd2121c30e8cfc 396 Pfam PF04303 PrpF protein 6 391 3.1E-175 T 23-10-2018 IPR007400 PrpF protein CDG62_16440 9bc9f7f98fc3e07bee591a3f5552ffc8 283 PIRSF PIRSF005052 2 283 3.7E-109 T 23-10-2018 IPR005337 RapZ-like family GO:0005524 CDG62_16440 9bc9f7f98fc3e07bee591a3f5552ffc8 283 SUPERFAMILY SSF52540 1 153 6.42E-10 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_16440 9bc9f7f98fc3e07bee591a3f5552ffc8 283 Pfam PF03668 P-loop ATPase protein family 4 280 4.5E-86 T 23-10-2018 IPR005337 RapZ-like family GO:0005524 CDG62_16440 9bc9f7f98fc3e07bee591a3f5552ffc8 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 2 281 37.837 T 23-10-2018 IPR005337 RapZ-like family GO:0005524 CDG62_08010 52a14bc940d1000c67856ca1db85d7c0 388 Pfam PF13393 Histidyl-tRNA synthetase 12 322 2.4E-98 T 23-10-2018 CDG62_08010 52a14bc940d1000c67856ca1db85d7c0 388 PIRSF PIRSF001549 6 368 5.3E-36 T 23-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CDG62_08010 52a14bc940d1000c67856ca1db85d7c0 388 Gene3D G3DSA:3.30.930.10 5 331 6.0E-60 T 23-10-2018 CDG62_08010 52a14bc940d1000c67856ca1db85d7c0 388 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 371 25.441 T 23-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 CDG62_08010 52a14bc940d1000c67856ca1db85d7c0 388 SUPERFAMILY SSF55681 7 330 7.46E-52 T 23-10-2018 CDG62_12640 f564cb27bb1e7afb863876e32e028503 113 Gene3D G3DSA:3.40.30.10 6 108 5.0E-30 T 23-10-2018 CDG62_12640 f564cb27bb1e7afb863876e32e028503 113 PIRSF PIRSF005894 2 110 5.5E-46 T 23-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 CDG62_12640 f564cb27bb1e7afb863876e32e028503 113 SUPERFAMILY SSF52833 7 107 2.1E-33 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_12640 f564cb27bb1e7afb863876e32e028503 113 Pfam PF00462 Glutaredoxin 21 85 7.8E-18 T 23-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CDG62_12640 f564cb27bb1e7afb863876e32e028503 113 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 10 105 4.9E-43 T 23-10-2018 IPR004480 Monothiol glutaredoxin-related CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 Pfam PF16921 Tex protein YqgF-like domain 317 442 6.7E-49 T 23-10-2018 IPR032639 Tex protein, YqgF-like domain CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 SUPERFAMILY SSF47781 461 549 1.22E-26 T 23-10-2018 IPR010994 RuvA domain 2-like CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 Pfam PF09371 Tex-like protein N-terminal domain 8 187 6.3E-53 T 23-10-2018 IPR018974 Tex-like protein, N-terminal CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 SMART SM00732 316 415 1.3E-30 T 23-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 Pfam PF12836 Helix-hairpin-helix motif 482 546 1.8E-25 T 23-10-2018 CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 SUPERFAMILY SSF47781 552 623 9.34E-19 T 23-10-2018 IPR010994 RuvA domain 2-like CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 SUPERFAMILY SSF158832 1 311 2.22E-87 T 23-10-2018 CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 Gene3D G3DSA:3.30.420.140 315 442 3.7E-134 T 23-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 Gene3D G3DSA:1.10.10.650 1 108 8.9E-36 T 23-10-2018 IPR023319 Tex-like protein, HTH domain superfamily CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 SMART SM00316 640 711 6.1E-25 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 SUPERFAMILY SSF50249 628 714 1.04E-24 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 Pfam PF00575 S1 RNA binding domain 640 711 2.5E-21 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 Gene3D G3DSA:1.10.150.310 490 621 3.1E-49 T 23-10-2018 CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 SUPERFAMILY SSF53098 312 460 1.52E-46 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 Gene3D G3DSA:2.40.50.140 622 714 3.1E-29 T 23-10-2018 CDG62_04070 8be41a54c4c48bf11c85beb814ca8bf1 783 Gene3D G3DSA:1.10.3500.10 112 489 3.7E-134 T 23-10-2018 IPR023323 Tex-like domain superfamily CDG62_08200 8a2fbd183cc68a78f6837344ba5f0b7a 65 Gene3D G3DSA:3.10.20.30 1 65 4.1E-16 T 23-10-2018 IPR012675 Beta-grasp domain superfamily CDG62_08200 8a2fbd183cc68a78f6837344ba5f0b7a 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 6.1E-17 T 23-10-2018 IPR010035 ThiS, thiamine-biosynthesis CDG62_08200 8a2fbd183cc68a78f6837344ba5f0b7a 65 SUPERFAMILY SSF54285 2 64 5.42E-14 T 23-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDG62_08200 8a2fbd183cc68a78f6837344ba5f0b7a 65 Pfam PF02597 ThiS family 8 65 1.0E-9 T 23-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 37.701 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 Gene3D G3DSA:3.40.50.1260 165 383 8.3E-155 T 23-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 Gene3D G3DSA:3.40.50.1260 10 389 8.3E-155 T 23-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 PIRSF PIRSF000724 1 396 2.8E-126 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 5.2E-79 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 5.2E-79 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 PRINTS PR00477 Phosphoglycerate kinase family signature 313 338 5.2E-79 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 5.2E-79 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 5.2E-79 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 5.2E-79 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 5.2E-79 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 5.2E-79 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 5.2E-79 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 SUPERFAMILY SSF53748 2 391 2.12E-136 T 23-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 Pfam PF00162 Phosphoglycerate kinase 6 383 2.4E-136 T 23-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_10470 8e8d2ab12242aa5aa31f7d7f214da287 396 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 23-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CDG62_16700 a62eb6b2bbf852c8afb558157cba3d81 285 Pfam PF01569 PAP2 superfamily 125 244 5.4E-16 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG62_16700 a62eb6b2bbf852c8afb558157cba3d81 285 SUPERFAMILY SSF48317 42 257 1.7E-34 T 23-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDG62_16700 a62eb6b2bbf852c8afb558157cba3d81 285 SMART SM00014 112 239 1.5E-13 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG62_16700 a62eb6b2bbf852c8afb558157cba3d81 285 PIRSF PIRSF000897 2 277 6.0E-83 T 23-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CDG62_16700 a62eb6b2bbf852c8afb558157cba3d81 285 Gene3D G3DSA:1.20.144.10 33 267 9.9E-61 T 23-10-2018 CDG62_18340 eaecc0ad8d21fffffbe3a40be8caffbc 635 SUPERFAMILY SSF51004 71 295 1.73E-18 T 23-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CDG62_18340 eaecc0ad8d21fffffbe3a40be8caffbc 635 Gene3D G3DSA:2.130.10.10 41 315 3.9E-16 T 23-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 CDG62_17805 db11cfbf76a807ce2e5f4d269ee212f2 304 Gene3D G3DSA:2.60.120.330 44 230 1.3E-42 T 23-10-2018 IPR027443 Isopenicillin N synthase-like CDG62_17805 db11cfbf76a807ce2e5f4d269ee212f2 304 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 70 223 5.7E-47 T 23-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 CDG62_17805 db11cfbf76a807ce2e5f4d269ee212f2 304 SUPERFAMILY SSF51197 100 224 8.24E-18 T 23-10-2018 CDG62_12130 c9d54d500160069f03e3757038cbc020 945 SUPERFAMILY SSF52540 153 382 2.07E-36 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12130 c9d54d500160069f03e3757038cbc020 945 SMART SM00487 156 355 3.2E-21 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG62_12130 c9d54d500160069f03e3757038cbc020 945 Gene3D G3DSA:3.30.360.80 691 762 7.8E-21 T 23-10-2018 CDG62_12130 c9d54d500160069f03e3757038cbc020 945 Pfam PF12137 RNA polymerase recycling family C-terminal 585 942 4.1E-118 T 23-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 CDG62_12130 c9d54d500160069f03e3757038cbc020 945 Pfam PF00271 Helicase conserved C-terminal domain 476 580 5.5E-11 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_12130 c9d54d500160069f03e3757038cbc020 945 Gene3D G3DSA:2.30.30.930 59 120 9.7E-6 T 23-10-2018 CDG62_12130 c9d54d500160069f03e3757038cbc020 945 Gene3D G3DSA:2.30.30.140 5 57 1.9E-24 T 23-10-2018 CDG62_12130 c9d54d500160069f03e3757038cbc020 945 Gene3D G3DSA:3.40.50.300 435 612 8.7E-37 T 23-10-2018 CDG62_12130 c9d54d500160069f03e3757038cbc020 945 Gene3D G3DSA:3.40.50.10810 156 427 1.2E-85 T 23-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily CDG62_12130 c9d54d500160069f03e3757038cbc020 945 SMART SM00490 496 580 3.5E-14 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_12130 c9d54d500160069f03e3757038cbc020 945 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 5 943 26.346 T 23-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 CDG62_12130 c9d54d500160069f03e3757038cbc020 945 SUPERFAMILY SSF52540 282 619 4.51E-39 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12130 c9d54d500160069f03e3757038cbc020 945 Pfam PF00176 SNF2 family N-terminal domain 180 353 1.9E-11 T 23-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CDG62_01675 a5b0016115f23b427cfc11e95c85ba6e 337 Pfam PF13602 Zinc-binding dehydrogenase 194 334 1.5E-15 T 23-10-2018 CDG62_01675 a5b0016115f23b427cfc11e95c85ba6e 337 SMART SM00829 13 334 1.1E-12 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDG62_01675 a5b0016115f23b427cfc11e95c85ba6e 337 Gene3D G3DSA:3.40.50.720 128 273 3.7E-116 T 23-10-2018 CDG62_01675 a5b0016115f23b427cfc11e95c85ba6e 337 Gene3D G3DSA:3.90.180.10 23 334 3.7E-116 T 23-10-2018 CDG62_01675 a5b0016115f23b427cfc11e95c85ba6e 337 SUPERFAMILY SSF51735 117 278 3.59E-34 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_01675 a5b0016115f23b427cfc11e95c85ba6e 337 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 337 2.5E-165 T 23-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 CDG62_01675 a5b0016115f23b427cfc11e95c85ba6e 337 SUPERFAMILY SSF50129 1 142 2.28E-32 T 23-10-2018 IPR011032 GroES-like superfamily CDG62_01675 a5b0016115f23b427cfc11e95c85ba6e 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 91 8.2E-7 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDG62_13965 21c8c565810139953b6e40f46b9212de 421 Pfam PF13186 Iron-sulfur cluster-binding domain 308 369 1.2E-8 T 23-10-2018 IPR023885 4Fe4S-binding SPASM domain CDG62_13965 21c8c565810139953b6e40f46b9212de 421 SUPERFAMILY SSF102114 35 378 2.09E-39 T 23-10-2018 CDG62_13965 21c8c565810139953b6e40f46b9212de 421 Pfam PF13353 4Fe-4S single cluster domain 34 141 7.5E-5 T 23-10-2018 CDG62_13965 21c8c565810139953b6e40f46b9212de 421 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 308 390 7.8E-19 T 23-10-2018 IPR023885 4Fe4S-binding SPASM domain CDG62_13965 21c8c565810139953b6e40f46b9212de 421 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 26 412 7.8E-144 T 23-10-2018 CDG62_13965 21c8c565810139953b6e40f46b9212de 421 Gene3D G3DSA:3.20.20.70 24 419 3.5E-108 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_13965 21c8c565810139953b6e40f46b9212de 421 Pfam PF04055 Radical SAM superfamily 35 188 6.5E-13 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG62_18940 43515a4164152332405e6bbe3754e7f9 730 SUPERFAMILY SSF52540 533 713 3.78E-38 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_18940 43515a4164152332405e6bbe3754e7f9 730 Pfam PF13807 G-rich domain on putative tyrosine kinase 377 458 1.4E-29 T 23-10-2018 IPR032807 Tyrosine kinase, G-rich domain CDG62_18940 43515a4164152332405e6bbe3754e7f9 730 Pfam PF02706 Chain length determinant protein 9 101 2.5E-21 T 23-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CDG62_18940 43515a4164152332405e6bbe3754e7f9 730 Gene3D G3DSA:3.40.50.300 452 727 3.2E-78 T 23-10-2018 CDG62_18940 43515a4164152332405e6bbe3754e7f9 730 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 514 716 1.5E-47 T 23-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 CDG62_18940 43515a4164152332405e6bbe3754e7f9 730 Pfam PF13614 AAA domain 544 691 3.4E-13 T 23-10-2018 IPR025669 AAA domain CDG62_17515 837c1e84ad571ffaf7380bbe5d9218cf 86 Pfam PF04325 Protein of unknown function (DUF465) 31 78 1.7E-12 T 23-10-2018 IPR007420 Protein of unknown function DUF465 CDG62_17515 837c1e84ad571ffaf7380bbe5d9218cf 86 Gene3D G3DSA:1.20.58.660 13 86 1.0E-23 T 23-10-2018 CDG62_05625 c36f83e1c02358845867603ac8b51b67 291 SUPERFAMILY SSF47240 59 206 2.58E-8 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG62_05625 c36f83e1c02358845867603ac8b51b67 291 Pfam PF10118 Predicted metal-dependent hydrolase 16 260 7.0E-74 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG62_05625 c36f83e1c02358845867603ac8b51b67 291 PIRSF PIRSF007580 7 278 1.5E-65 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG62_18935 156e7ef0f89fb33af06902196293fd47 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 42 58 8.2E-19 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG62_18935 156e7ef0f89fb33af06902196293fd47 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 8.2E-19 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG62_18935 156e7ef0f89fb33af06902196293fd47 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 76 91 8.2E-19 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG62_18935 156e7ef0f89fb33af06902196293fd47 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 98 111 8.2E-19 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG62_18935 156e7ef0f89fb33af06902196293fd47 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 8.2E-19 T 23-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CDG62_18935 156e7ef0f89fb33af06902196293fd47 142 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 138 3.5E-35 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CDG62_18935 156e7ef0f89fb33af06902196293fd47 142 SUPERFAMILY SSF52788 1 142 6.28E-41 T 23-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily CDG62_18935 156e7ef0f89fb33af06902196293fd47 142 SMART SM00226 4 141 7.8E-59 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CDG62_18935 156e7ef0f89fb33af06902196293fd47 142 Gene3D G3DSA:3.40.50.2300 1 142 1.2E-44 T 23-10-2018 CDG62_12560 691337f56e97dc23f519e4765a6fb969 668 SUPERFAMILY SSF54001 336 569 6.59E-49 T 23-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CDG62_12560 691337f56e97dc23f519e4765a6fb969 668 Pfam PF01841 Transglutaminase-like superfamily 360 473 4.8E-22 T 23-10-2018 IPR002931 Transglutaminase-like CDG62_12560 691337f56e97dc23f519e4765a6fb969 668 Pfam PF11992 Domain of unknown function (DUF3488) 9 318 1.9E-70 T 23-10-2018 IPR021878 Protein of unknown function DUF3488 CDG62_12560 691337f56e97dc23f519e4765a6fb969 668 Gene3D G3DSA:3.10.620.30 309 493 5.4E-22 T 23-10-2018 CDG62_12560 691337f56e97dc23f519e4765a6fb969 668 SMART SM00460 405 475 2.2E-18 T 23-10-2018 IPR002931 Transglutaminase-like CDG62_13325 af281854cb05a00d7da7e7d36da5940a 138 SUPERFAMILY SSF103196 15 131 7.5E-14 T 23-10-2018 CDG62_13325 af281854cb05a00d7da7e7d36da5940a 138 Gene3D G3DSA:3.30.450.30 17 133 3.6E-19 T 23-10-2018 CDG62_13325 af281854cb05a00d7da7e7d36da5940a 138 Pfam PF03259 Roadblock/LC7 domain 19 97 3.7E-6 T 23-10-2018 IPR004942 Roadblock/LAMTOR2 domain CDG62_13150 552e1baf6d1b827ca08c40e2743b448f 339 Gene3D G3DSA:3.40.1750.20 187 253 3.5E-65 T 23-10-2018 CDG62_13150 552e1baf6d1b827ca08c40e2743b448f 339 Gene3D G3DSA:3.90.226.10 84 288 3.5E-65 T 23-10-2018 CDG62_13150 552e1baf6d1b827ca08c40e2743b448f 339 SUPERFAMILY SSF52096 74 284 5.74E-42 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_13150 552e1baf6d1b827ca08c40e2743b448f 339 Pfam PF01343 Peptidase family S49 147 297 2.4E-37 T 23-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CDG62_13150 552e1baf6d1b827ca08c40e2743b448f 339 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 83 293 3.7E-48 T 23-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 CDG62_13145 443a6c076e56bb194c2f60f7549bf958 266 Pfam PF12697 Alpha/beta hydrolase family 7 255 1.6E-11 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_13145 443a6c076e56bb194c2f60f7549bf958 266 Gene3D G3DSA:3.40.50.1820 1 266 1.7E-42 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_13145 443a6c076e56bb194c2f60f7549bf958 266 SUPERFAMILY SSF53474 2 263 8.04E-27 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_16335 2ea7b26cc887b0fbc6ee04ab639798d5 422 SMART SM00382 170 355 6.6E-9 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_16335 2ea7b26cc887b0fbc6ee04ab639798d5 422 SMART SM00357 52 118 5.8E-19 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 CDG62_16335 2ea7b26cc887b0fbc6ee04ab639798d5 422 SMART SM00959 5 47 8.6E-17 T 23-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CDG62_16335 2ea7b26cc887b0fbc6ee04ab639798d5 422 SUPERFAMILY SSF50249 48 125 1.33E-28 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_16335 2ea7b26cc887b0fbc6ee04ab639798d5 422 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.1E-32 T 23-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 CDG62_16335 2ea7b26cc887b0fbc6ee04ab639798d5 422 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 241.878 T 23-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CDG62_16335 2ea7b26cc887b0fbc6ee04ab639798d5 422 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 6.7E-23 T 23-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 CDG62_16335 2ea7b26cc887b0fbc6ee04ab639798d5 422 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.1E-15 T 23-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CDG62_16335 2ea7b26cc887b0fbc6ee04ab639798d5 422 Gene3D G3DSA:1.10.720.10 1 46 4.1E-20 T 23-10-2018 CDG62_16335 2ea7b26cc887b0fbc6ee04ab639798d5 422 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.9E-210 T 23-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CDG62_16335 2ea7b26cc887b0fbc6ee04ab639798d5 422 Gene3D G3DSA:3.40.50.300 130 417 1.3E-128 T 23-10-2018 CDG62_16335 2ea7b26cc887b0fbc6ee04ab639798d5 422 SUPERFAMILY SSF68912 1 46 2.2E-11 T 23-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily CDG62_16335 2ea7b26cc887b0fbc6ee04ab639798d5 422 Gene3D G3DSA:2.40.50.140 47 123 4.6E-34 T 23-10-2018 CDG62_16335 2ea7b26cc887b0fbc6ee04ab639798d5 422 SUPERFAMILY SSF52540 90 370 8.8E-65 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_05160 a532de6869c6ab19a13f0b8722ff046d 230 SUPERFAMILY SSF47781 17 93 3.11E-10 T 23-10-2018 IPR010994 RuvA domain 2-like CDG62_05160 a532de6869c6ab19a13f0b8722ff046d 230 Pfam PF04002 RadC-like JAB domain 107 224 1.4E-32 T 23-10-2018 IPR025657 RadC-like JAB domain CDG62_05160 a532de6869c6ab19a13f0b8722ff046d 230 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 226 1.2E-58 T 23-10-2018 IPR001405 Uncharacterised protein family UPF0758 CDG62_05160 a532de6869c6ab19a13f0b8722ff046d 230 Gene3D G3DSA:3.40.140.10 103 227 7.3E-34 T 23-10-2018 CDG62_05160 a532de6869c6ab19a13f0b8722ff046d 230 Gene3D G3DSA:1.10.150.20 46 89 3.2E-7 T 23-10-2018 CDG62_05230 2f5d7dcd3a723fb752745732f2e2e91d 169 Gene3D G3DSA:3.30.160.150 28 168 6.8E-35 T 23-10-2018 CDG62_05230 2f5d7dcd3a723fb752745732f2e2e91d 169 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 8 164 17.106 T 23-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CDG62_10990 38a50485a2453425688caffda0361171 137 Pfam PF04143 Sulphur transport 35 131 2.5E-7 T 23-10-2018 IPR007272 Sulphur transport domain CDG62_05320 1656fdd0563128ab65fed276fea6e2a5 258 Pfam PF13413 Helix-turn-helix domain 26 86 8.8E-19 T 23-10-2018 CDG62_05320 1656fdd0563128ab65fed276fea6e2a5 258 Pfam PF13464 Domain of unknown function (DUF4115) 185 256 8.3E-12 T 23-10-2018 IPR025194 Domain of unknown function DUF4115 CDG62_05320 1656fdd0563128ab65fed276fea6e2a5 258 Gene3D G3DSA:1.10.260.40 14 102 2.0E-21 T 23-10-2018 CDG62_11845 ed4df3c9607141477a01d95a5d30da15 249 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 34.686 T 23-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_11845 ed4df3c9607141477a01d95a5d30da15 249 SUPERFAMILY SSF75625 3 246 1.7E-91 T 23-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_11845 ed4df3c9607141477a01d95a5d30da15 249 Gene3D G3DSA:1.10.10.200 1 81 3.7E-33 T 23-10-2018 IPR017856 Integrase-like, N-terminal CDG62_11845 ed4df3c9607141477a01d95a5d30da15 249 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 1.5E-95 T 23-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_11845 ed4df3c9607141477a01d95a5d30da15 249 Gene3D G3DSA:3.30.70.980 130 204 3.8E-53 T 23-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_11845 ed4df3c9607141477a01d95a5d30da15 249 Gene3D G3DSA:3.30.70.980 85 236 3.8E-53 T 23-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_11845 ed4df3c9607141477a01d95a5d30da15 249 Pfam PF01709 Transcriptional regulator 5 237 3.4E-92 T 23-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_04515 6af12710691e1349e995a87203bf58ba 289 PIRSF PIRSF037798 1 289 6.2E-155 T 23-10-2018 IPR017283 Protein/nucleic acid deglycase HchA GO:0036524 CDG62_04515 6af12710691e1349e995a87203bf58ba 289 Pfam PF01965 DJ-1/PfpI family 76 198 1.3E-8 T 23-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CDG62_04515 6af12710691e1349e995a87203bf58ba 289 SUPERFAMILY SSF52317 8 287 1.64E-58 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_04515 6af12710691e1349e995a87203bf58ba 289 Gene3D G3DSA:3.40.50.880 5 289 8.0E-81 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_13860 41394586b10a7b813321d852dbb71bab 196 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 188 2.1E-42 T 23-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CDG62_13860 41394586b10a7b813321d852dbb71bab 196 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 188 2.2E-35 T 23-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CDG62_13860 41394586b10a7b813321d852dbb71bab 196 Gene3D G3DSA:3.40.50.10420 5 196 4.4E-48 T 23-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CDG62_13860 41394586b10a7b813321d852dbb71bab 196 SUPERFAMILY SSF100950 6 195 1.03E-43 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG62_13860 41394586b10a7b813321d852dbb71bab 196 PIRSF PIRSF006806 1 191 6.3E-36 T 23-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CDG62_14755 bd5671a68895289d7cd392ffbdbc9809 285 SMART SM00244 21 179 2.7E-53 T 23-10-2018 IPR001107 Band 7 domain CDG62_14755 bd5671a68895289d7cd392ffbdbc9809 285 PRINTS PR00721 Stomatin signature 155 173 1.5E-25 T 23-10-2018 IPR001972 Stomatin family GO:0016020 CDG62_14755 bd5671a68895289d7cd392ffbdbc9809 285 PRINTS PR00721 Stomatin signature 131 154 1.5E-25 T 23-10-2018 IPR001972 Stomatin family GO:0016020 CDG62_14755 bd5671a68895289d7cd392ffbdbc9809 285 PRINTS PR00721 Stomatin signature 76 97 1.5E-25 T 23-10-2018 IPR001972 Stomatin family GO:0016020 CDG62_14755 bd5671a68895289d7cd392ffbdbc9809 285 PRINTS PR00721 Stomatin signature 28 50 1.5E-25 T 23-10-2018 IPR001972 Stomatin family GO:0016020 CDG62_14755 bd5671a68895289d7cd392ffbdbc9809 285 PRINTS PR00721 Stomatin signature 111 128 1.5E-25 T 23-10-2018 IPR001972 Stomatin family GO:0016020 CDG62_14755 bd5671a68895289d7cd392ffbdbc9809 285 PRINTS PR00721 Stomatin signature 174 195 1.5E-25 T 23-10-2018 IPR001972 Stomatin family GO:0016020 CDG62_14755 bd5671a68895289d7cd392ffbdbc9809 285 Gene3D G3DSA:3.30.479.30 49 181 7.8E-38 T 23-10-2018 CDG62_14755 bd5671a68895289d7cd392ffbdbc9809 285 Pfam PF01145 SPFH domain / Band 7 family 25 195 1.5E-34 T 23-10-2018 IPR001107 Band 7 domain CDG62_14755 bd5671a68895289d7cd392ffbdbc9809 285 SUPERFAMILY SSF117892 52 186 1.12E-37 T 23-10-2018 IPR036013 Band 7/SPFH domain superfamily CDG62_04305 47dafc05adf7110f775027773f60c77f 301 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 8.7E-8 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_04305 47dafc05adf7110f775027773f60c77f 301 Pfam PF16074 Type IV Pilus-assembly protein W 159 295 1.6E-8 T 23-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 CDG62_04305 47dafc05adf7110f775027773f60c77f 301 SUPERFAMILY SSF54523 7 64 4.71E-6 T 23-10-2018 CDG62_04305 47dafc05adf7110f775027773f60c77f 301 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 5.0E-9 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_04305 47dafc05adf7110f775027773f60c77f 301 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_07345 003e1beea63db0c4d72248db3b677ce0 166 Gene3D G3DSA:3.40.960.10 52 161 2.4E-10 T 23-10-2018 CDG62_07345 003e1beea63db0c4d72248db3b677ce0 166 Pfam PF10881 Protein of unknown function (DUF2726) 50 156 3.0E-17 T 23-10-2018 IPR024402 Domain of unknown function DUF2726 CDG62_14130 ca9fd333068a340b209c52bb159ecc3c 300 Gene3D G3DSA:1.10.10.10 3 88 1.9E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_14130 ca9fd333068a340b209c52bb159ecc3c 300 Gene3D G3DSA:3.40.190.10 165 264 6.9E-51 T 23-10-2018 CDG62_14130 ca9fd333068a340b209c52bb159ecc3c 300 SUPERFAMILY SSF53850 92 298 5.29E-30 T 23-10-2018 CDG62_14130 ca9fd333068a340b209c52bb159ecc3c 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.9E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_14130 ca9fd333068a340b209c52bb159ecc3c 300 SUPERFAMILY SSF46785 5 115 2.73E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_14130 ca9fd333068a340b209c52bb159ecc3c 300 Gene3D G3DSA:3.40.190.10 95 293 6.9E-51 T 23-10-2018 CDG62_14130 ca9fd333068a340b209c52bb159ecc3c 300 Pfam PF03466 LysR substrate binding domain 91 294 1.4E-38 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_10900 9e1e93ed5df43cb12a98780611e18c11 496 ProSitePatterns PS00571 Amidases signature. 150 181 - T 23-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CDG62_10900 9e1e93ed5df43cb12a98780611e18c11 496 Pfam PF01425 Amidase 27 475 7.0E-76 T 23-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG62_10900 9e1e93ed5df43cb12a98780611e18c11 496 Gene3D G3DSA:3.90.1300.10 4 496 9.0E-149 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG62_10900 9e1e93ed5df43cb12a98780611e18c11 496 SUPERFAMILY SSF75304 2 484 6.02E-116 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG62_06510 16fa14343ae769e78131310242dd34d2 498 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 8 478 17.454 T 23-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CDG62_06510 16fa14343ae769e78131310242dd34d2 498 Pfam PF00361 Proton-conducting membrane transporter 127 423 3.2E-73 T 23-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06510 16fa14343ae769e78131310242dd34d2 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 7.4E-5 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06510 16fa14343ae769e78131310242dd34d2 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 7.4E-5 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06510 16fa14343ae769e78131310242dd34d2 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 380 406 7.4E-5 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_06510 16fa14343ae769e78131310242dd34d2 498 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 11 478 3.3E-126 T 23-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CDG62_13885 20fa105057203a3952c0530d4fac570e 258 PIRSF PIRSF006157 1 258 2.8E-82 T 23-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 CDG62_13885 20fa105057203a3952c0530d4fac570e 258 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 257 3.4E-42 T 23-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CDG62_13885 20fa105057203a3952c0530d4fac570e 258 Gene3D G3DSA:3.40.830.10 1 258 3.7E-86 T 23-10-2018 CDG62_13885 20fa105057203a3952c0530d4fac570e 258 SUPERFAMILY SSF53213 6 258 4.45E-84 T 23-10-2018 CDG62_05305 06f082fe49d8f6fc36c046b53e36ffe2 143 SMART SM00562 3 140 3.1E-85 T 23-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG62_05305 06f082fe49d8f6fc36c046b53e36ffe2 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.969 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG62_05305 06f082fe49d8f6fc36c046b53e36ffe2 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.7E-39 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG62_05305 06f082fe49d8f6fc36c046b53e36ffe2 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.7E-39 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG62_05305 06f082fe49d8f6fc36c046b53e36ffe2 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.7E-39 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG62_05305 06f082fe49d8f6fc36c046b53e36ffe2 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.7E-39 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG62_05305 06f082fe49d8f6fc36c046b53e36ffe2 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.7E-39 T 23-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG62_05305 06f082fe49d8f6fc36c046b53e36ffe2 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 9.9E-56 T 23-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG62_05305 06f082fe49d8f6fc36c046b53e36ffe2 143 Gene3D G3DSA:3.30.70.141 1 143 2.0E-59 T 23-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG62_05305 06f082fe49d8f6fc36c046b53e36ffe2 143 SUPERFAMILY SSF54919 1 140 3.67E-56 T 23-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CDG62_05305 06f082fe49d8f6fc36c046b53e36ffe2 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 23-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CDG62_16145 7bc39983fe95ca96cd291806fcbfe8c8 277 Pfam PF03412 Peptidase C39 family 63 197 7.7E-15 T 23-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CDG62_16145 7bc39983fe95ca96cd291806fcbfe8c8 277 Gene3D G3DSA:3.90.70.10 51 208 3.3E-29 T 23-10-2018 CDG62_16510 4c7204b47e2d3e710c5d5e68728a6ab2 291 Gene3D G3DSA:3.40.50.720 2 164 1.1E-40 T 23-10-2018 CDG62_16510 4c7204b47e2d3e710c5d5e68728a6ab2 291 SUPERFAMILY SSF48179 164 287 4.08E-26 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_16510 4c7204b47e2d3e710c5d5e68728a6ab2 291 SUPERFAMILY SSF51735 7 163 6.98E-38 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_16510 4c7204b47e2d3e710c5d5e68728a6ab2 291 PIRSF PIRSF000103 1 291 2.7E-60 T 23-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CDG62_16510 4c7204b47e2d3e710c5d5e68728a6ab2 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 283 6.5E-22 T 23-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CDG62_16510 4c7204b47e2d3e710c5d5e68728a6ab2 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 162 2.1E-39 T 23-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 CDG62_16510 4c7204b47e2d3e710c5d5e68728a6ab2 291 Gene3D G3DSA:1.10.1040.10 165 291 5.4E-30 T 23-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CDG62_15410 c76c5b6f17932d4b373ed5b2654d2ca8 222 SMART SM00345 13 71 6.4E-19 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_15410 c76c5b6f17932d4b373ed5b2654d2ca8 222 SMART SM00895 81 205 1.6E-23 T 23-10-2018 IPR011711 GntR, C-terminal CDG62_15410 c76c5b6f17932d4b373ed5b2654d2ca8 222 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 5.5E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_15410 c76c5b6f17932d4b373ed5b2654d2ca8 222 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 5.5E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_15410 c76c5b6f17932d4b373ed5b2654d2ca8 222 Gene3D G3DSA:1.20.120.530 78 208 7.4E-30 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG62_15410 c76c5b6f17932d4b373ed5b2654d2ca8 222 SUPERFAMILY SSF48008 79 207 1.18E-27 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG62_15410 c76c5b6f17932d4b373ed5b2654d2ca8 222 Pfam PF07729 FCD domain 81 203 4.8E-28 T 23-10-2018 IPR011711 GntR, C-terminal CDG62_15410 c76c5b6f17932d4b373ed5b2654d2ca8 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 70 2.9E-19 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_15410 c76c5b6f17932d4b373ed5b2654d2ca8 222 Gene3D G3DSA:1.10.10.10 6 72 9.7E-22 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15410 c76c5b6f17932d4b373ed5b2654d2ca8 222 SUPERFAMILY SSF46785 4 75 6.5E-21 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_13890 1b2b788b48416642481b53f9b7d49594 260 Gene3D G3DSA:2.40.128.270 31 153 5.5E-12 T 23-10-2018 IPR038670 HslJ-like superfamily CDG62_13890 1b2b788b48416642481b53f9b7d49594 260 Pfam PF14302 Domain of unknown function (DUF4377) 168 253 1.0E-24 T 23-10-2018 IPR025485 Domain of unknown function DUF4377 CDG62_13890 1b2b788b48416642481b53f9b7d49594 260 Pfam PF03724 META domain 46 144 3.2E-13 T 23-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ CDG62_08925 2994fc7f1b303b04d99b09ee2996c3c2 285 Gene3D G3DSA:3.40.50.1820 6 284 1.4E-26 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_08925 2994fc7f1b303b04d99b09ee2996c3c2 285 SUPERFAMILY SSF53474 4 268 2.06E-29 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_08925 2994fc7f1b303b04d99b09ee2996c3c2 285 PIRSF PIRSF037442 2 285 1.1E-74 T 23-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 CDG62_08925 2994fc7f1b303b04d99b09ee2996c3c2 285 Pfam PF12146 Serine aminopeptidase, S33 33 143 3.5E-11 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG62_05465 6f7166ec83ba8ae322086d445e57bdbd 187 SUPERFAMILY SSF51161 20 177 2.08E-31 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG62_05465 6f7166ec83ba8ae322086d445e57bdbd 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 68 1.7E-7 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_05465 6f7166ec83ba8ae322086d445e57bdbd 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 149 9.7E-4 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_05465 6f7166ec83ba8ae322086d445e57bdbd 187 Gene3D G3DSA:2.160.10.10 1 170 1.0E-42 T 23-10-2018 CDG62_12850 4b90955f7b9f3b060121480ee3dde771 124 Pfam PF16137 Domain of unknown function (DUF4845) 33 112 3.9E-16 T 23-10-2018 IPR032314 Protein of unknown function DUF4845 CDG62_03770 979c84cb73325e48337906634ff8355f 359 Pfam PF04332 Protein of unknown function (DUF475) 54 356 8.1E-115 T 23-10-2018 IPR007427 Protein of unknown function DUF475 CDG62_03100 4e12918621da22f3a81a418a17877b2c 301 SUPERFAMILY SSF46785 1 113 2.54E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_03100 4e12918621da22f3a81a418a17877b2c 301 SUPERFAMILY SSF53850 95 298 3.94E-34 T 23-10-2018 CDG62_03100 4e12918621da22f3a81a418a17877b2c 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.2E-13 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_03100 4e12918621da22f3a81a418a17877b2c 301 Gene3D G3DSA:3.40.190.290 94 299 1.0E-33 T 23-10-2018 CDG62_03100 4e12918621da22f3a81a418a17877b2c 301 Pfam PF03466 LysR substrate binding domain 99 294 2.5E-32 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_03100 4e12918621da22f3a81a418a17877b2c 301 Gene3D G3DSA:1.10.10.10 3 87 1.4E-17 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_19010 a09a9cef741960314e833db57d75c29e 127 Gene3D G3DSA:3.10.450.160 59 126 5.8E-14 T 23-10-2018 CDG62_19010 a09a9cef741960314e833db57d75c29e 127 Pfam PF11776 Nickel/cobalt transporter regulator 74 122 8.2E-16 T 23-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CDG62_19010 a09a9cef741960314e833db57d75c29e 127 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 69 122 5.0E-19 T 23-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CDG62_05120 b7f70a150e48f523ee8b3d118ac62520 162 Gene3D G3DSA:3.30.70.990 9 95 4.1E-28 T 23-10-2018 IPR035570 UPF0234, N-terminal CDG62_05120 b7f70a150e48f523ee8b3d118ac62520 162 SUPERFAMILY SSF89963 90 162 2.46E-27 T 23-10-2018 IPR036183 YajQ-like superfamily CDG62_05120 b7f70a150e48f523ee8b3d118ac62520 162 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 162 25.429 T 23-10-2018 IPR007551 Protein of unknown function DUF520 CDG62_05120 b7f70a150e48f523ee8b3d118ac62520 162 Gene3D G3DSA:3.30.70.860 96 162 3.7E-29 T 23-10-2018 IPR035571 UPF0234-like, C-terminal CDG62_05120 b7f70a150e48f523ee8b3d118ac62520 162 Pfam PF04461 Protein of unknown function (DUF520) 2 161 1.5E-61 T 23-10-2018 IPR007551 Protein of unknown function DUF520 CDG62_05120 b7f70a150e48f523ee8b3d118ac62520 162 SUPERFAMILY SSF89963 2 88 4.97E-28 T 23-10-2018 IPR036183 YajQ-like superfamily CDG62_01980 0e03564f2c4ab9757ce3a95b20995506 165 SMART SM00357 4 65 3.3E-9 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 CDG62_01980 0e03564f2c4ab9757ce3a95b20995506 165 Gene3D G3DSA:2.40.50.140 2 73 5.9E-17 T 23-10-2018 CDG62_01980 0e03564f2c4ab9757ce3a95b20995506 165 Pfam PF05901 Excalibur calcium-binding domain 126 160 1.2E-8 T 23-10-2018 IPR008613 Excalibur calcium-binding domain CDG62_01980 0e03564f2c4ab9757ce3a95b20995506 165 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 34 - T 23-10-2018 IPR019844 Cold-shock conserved site CDG62_01980 0e03564f2c4ab9757ce3a95b20995506 165 SMART SM00894 125 160 3.5E-4 T 23-10-2018 IPR008613 Excalibur calcium-binding domain CDG62_01980 0e03564f2c4ab9757ce3a95b20995506 165 Pfam PF00313 'Cold-shock' DNA-binding domain 4 63 8.9E-14 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG62_01980 0e03564f2c4ab9757ce3a95b20995506 165 SUPERFAMILY SSF50249 3 64 5.14E-13 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_16250 9e322c68ffe34932ba487f2b0d575a1f 300 Pfam PF04333 MlaA lipoprotein 71 260 3.8E-62 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CDG62_16250 9e322c68ffe34932ba487f2b0d575a1f 300 PRINTS PR01805 VacJ lipoprotein signature 175 192 2.1E-18 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CDG62_16250 9e322c68ffe34932ba487f2b0d575a1f 300 PRINTS PR01805 VacJ lipoprotein signature 72 85 2.1E-18 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CDG62_16250 9e322c68ffe34932ba487f2b0d575a1f 300 PRINTS PR01805 VacJ lipoprotein signature 140 157 2.1E-18 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CDG62_16250 9e322c68ffe34932ba487f2b0d575a1f 300 PRINTS PR01805 VacJ lipoprotein signature 89 105 2.1E-18 T 23-10-2018 IPR007428 MlaA lipoprotein GO:0016020 CDG62_17735 35ce447c7950f043a609613a592a640e 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 505 2.0E-18 T 23-10-2018 IPR003395 RecF/RecN/SMC, N-terminal CDG62_17735 35ce447c7950f043a609613a592a640e 553 Gene3D G3DSA:3.40.50.300 215 547 2.8E-46 T 23-10-2018 CDG62_17735 35ce447c7950f043a609613a592a640e 553 PIRSF PIRSF003128 1 551 5.3E-137 T 23-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CDG62_17735 35ce447c7950f043a609613a592a640e 553 SUPERFAMILY SSF52540 1 505 8.77E-55 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17735 35ce447c7950f043a609613a592a640e 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 545 1.4E-138 T 23-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CDG62_17735 35ce447c7950f043a609613a592a640e 553 Gene3D G3DSA:3.40.50.300 1 202 2.6E-37 T 23-10-2018 CDG62_12865 6a673d3fcad4fbe2435adc65e93afbee 158 SUPERFAMILY SSF54637 1 135 4.77E-38 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_12865 6a673d3fcad4fbe2435adc65e93afbee 158 Gene3D G3DSA:3.10.129.10 1 140 1.4E-32 T 23-10-2018 CDG62_12865 6a673d3fcad4fbe2435adc65e93afbee 158 Pfam PF13279 Thioesterase-like superfamily 11 130 1.5E-8 T 23-10-2018 CDG62_12975 9cc146b16f64fb34ec1e42f4f87f2809 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 4.6E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_12975 9cc146b16f64fb34ec1e42f4f87f2809 304 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 293 2.2E-103 T 23-10-2018 IPR017685 HTH-type transcriptional regulator ArgP CDG62_12975 9cc146b16f64fb34ec1e42f4f87f2809 304 SUPERFAMILY SSF53850 93 291 9.77E-19 T 23-10-2018 CDG62_12975 9cc146b16f64fb34ec1e42f4f87f2809 304 Pfam PF03466 LysR substrate binding domain 94 282 7.4E-10 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_12975 9cc146b16f64fb34ec1e42f4f87f2809 304 Gene3D G3DSA:1.10.10.10 1 83 1.1E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_12975 9cc146b16f64fb34ec1e42f4f87f2809 304 Gene3D G3DSA:3.40.190.290 88 295 6.9E-71 T 23-10-2018 CDG62_12975 9cc146b16f64fb34ec1e42f4f87f2809 304 SUPERFAMILY SSF46785 1 111 8.71E-16 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_15115 e768dba8906bbdd112ac22d1552dabcd 286 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 50 279 2.4E-81 T 23-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG62_15115 e768dba8906bbdd112ac22d1552dabcd 286 SUPERFAMILY SSF51569 37 282 1.65E-67 T 23-10-2018 CDG62_15115 e768dba8906bbdd112ac22d1552dabcd 286 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 50 282 38.577 T 23-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG62_15115 e768dba8906bbdd112ac22d1552dabcd 286 ProSitePatterns PS01028 Dehydroquinase class I active site. 148 178 - T 23-10-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG62_15115 e768dba8906bbdd112ac22d1552dabcd 286 Gene3D G3DSA:3.20.20.70 35 284 7.2E-80 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_15115 e768dba8906bbdd112ac22d1552dabcd 286 Pfam PF01487 Type I 3-dehydroquinase 53 279 2.2E-62 T 23-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CDG62_15740 41fc1df7a2986a4f14435d29e0650cc5 509 SUPERFAMILY SSF103473 19 499 2.62E-66 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_15740 41fc1df7a2986a4f14435d29e0650cc5 509 Gene3D G3DSA:1.20.1720.10 19 223 6.2E-47 T 23-10-2018 CDG62_15740 41fc1df7a2986a4f14435d29e0650cc5 509 Pfam PF07690 Major Facilitator Superfamily 22 416 1.0E-51 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_15740 41fc1df7a2986a4f14435d29e0650cc5 509 Gene3D G3DSA:1.20.1250.20 270 502 1.3E-16 T 23-10-2018 CDG62_15740 41fc1df7a2986a4f14435d29e0650cc5 509 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 493 1.5E-130 T 23-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 CDG62_07735 fae1ecafad4ebf0574977d5b071ba033 466 ProSitePatterns PS01276 Peptidase family U32 signature. 165 183 - T 23-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CDG62_07735 fae1ecafad4ebf0574977d5b071ba033 466 Gene3D G3DSA:2.40.30.10 364 448 4.0E-7 T 23-10-2018 CDG62_07735 fae1ecafad4ebf0574977d5b071ba033 466 Pfam PF16325 Peptidase family U32 C-terminal domain 367 447 6.8E-18 T 23-10-2018 IPR032525 Peptidase family U32, C-terminal CDG62_07735 fae1ecafad4ebf0574977d5b071ba033 466 Pfam PF01136 Peptidase family U32 79 350 1.9E-94 T 23-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CDG62_00700 a0f01303138e8e35abe20fe1d8c1edeb 234 Pfam PF13610 DDE domain 74 212 6.0E-50 T 23-10-2018 IPR032874 DDE domain CDG62_00700 a0f01303138e8e35abe20fe1d8c1edeb 234 Gene3D G3DSA:3.30.420.10 67 210 9.0E-6 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_00700 a0f01303138e8e35abe20fe1d8c1edeb 234 SUPERFAMILY SSF53098 72 191 3.54E-9 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_16015 417ea4f4f208a80dfb96817c66413c0a 214 Gene3D G3DSA:1.10.150.240 16 84 7.8E-57 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG62_16015 417ea4f4f208a80dfb96817c66413c0a 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 185 3.0E-26 T 23-10-2018 CDG62_16015 417ea4f4f208a80dfb96817c66413c0a 214 Gene3D G3DSA:3.40.50.1000 5 204 7.8E-57 T 23-10-2018 IPR023214 HAD superfamily CDG62_16015 417ea4f4f208a80dfb96817c66413c0a 214 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 177 7.0E-8 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_16015 417ea4f4f208a80dfb96817c66413c0a 214 SUPERFAMILY SSF56784 2 214 3.1E-51 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_17215 ff8f2319b067f34a12d6b089b2738a91 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.5E-18 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_17215 ff8f2319b067f34a12d6b089b2738a91 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.5E-18 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_17215 ff8f2319b067f34a12d6b089b2738a91 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.5E-18 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_17215 ff8f2319b067f34a12d6b089b2738a91 150 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 5.7E-21 T 23-10-2018 CDG62_17215 ff8f2319b067f34a12d6b089b2738a91 150 SMART SM00344 1 110 2.5E-47 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG62_17215 ff8f2319b067f34a12d6b089b2738a91 150 Gene3D G3DSA:3.30.70.920 55 137 1.4E-17 T 23-10-2018 CDG62_17215 ff8f2319b067f34a12d6b089b2738a91 150 SUPERFAMILY SSF54909 62 146 1.07E-15 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_17215 ff8f2319b067f34a12d6b089b2738a91 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 23-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDG62_17215 ff8f2319b067f34a12d6b089b2738a91 150 Gene3D G3DSA:1.10.10.10 1 54 7.7E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_17215 ff8f2319b067f34a12d6b089b2738a91 150 SUPERFAMILY SSF46785 1 60 5.84E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_17215 ff8f2319b067f34a12d6b089b2738a91 150 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 1.3E-16 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG62_05035 2437a22607a75625d4296a951343ca5e 285 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 283 9.7E-69 T 23-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CDG62_05035 2437a22607a75625d4296a951343ca5e 285 Gene3D G3DSA:3.40.50.150 1 285 2.6E-97 T 23-10-2018 CDG62_05035 2437a22607a75625d4296a951343ca5e 285 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 270 39.24 T 23-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CDG62_05035 2437a22607a75625d4296a951343ca5e 285 SUPERFAMILY SSF53335 8 276 4.07E-83 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_14380 251d3f93dd5abf1c2de3a90ed5b9503c 186 Pfam PF14317 YcxB-like protein 108 177 2.6E-19 T 23-10-2018 IPR025588 YcxB-like protein CDG62_09755 59595e23139a2e4a065564c38f7c2aba 312 Pfam PF07885 Ion channel 29 105 1.6E-16 T 23-10-2018 IPR013099 Potassium channel domain CDG62_09755 59595e23139a2e4a065564c38f7c2aba 312 SUPERFAMILY SSF81324 10 136 1.13E-22 T 23-10-2018 CDG62_09755 59595e23139a2e4a065564c38f7c2aba 312 Gene3D G3DSA:1.10.287.70 6 145 7.3E-20 T 23-10-2018 CDG62_12660 3f40a12c384b915dc0e16243cff768cf 462 Pfam PF11812 Domain of unknown function (DUF3333) 30 193 1.4E-42 T 23-10-2018 IPR024573 Domain of unknown function DUF3333 CDG62_12660 3f40a12c384b915dc0e16243cff768cf 462 Gene3D G3DSA:1.10.3720.10 232 460 1.1E-34 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_12660 3f40a12c384b915dc0e16243cff768cf 462 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 258 459 1.6E-21 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_12660 3f40a12c384b915dc0e16243cff768cf 462 SUPERFAMILY SSF161098 236 448 5.23E-36 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_12660 3f40a12c384b915dc0e16243cff768cf 462 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 220 459 1.4E-64 T 23-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CDG62_10150 eed6599cdddc08b10267f4a10527a283 253 Gene3D G3DSA:3.90.550.10 1 252 3.1E-88 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_10150 eed6599cdddc08b10267f4a10527a283 253 Pfam PF02348 Cytidylyltransferase 4 222 1.6E-47 T 23-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CDG62_10150 eed6599cdddc08b10267f4a10527a283 253 SUPERFAMILY SSF53448 3 246 9.15E-52 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_10150 eed6599cdddc08b10267f4a10527a283 253 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 249 35.846 T 23-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CDG62_10150 eed6599cdddc08b10267f4a10527a283 253 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 242 1.4E-76 T 23-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CDG62_15935 7bf407ea561a293707b554dca5d983ac 496 Gene3D G3DSA:3.50.50.60 157 249 2.6E-13 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_15935 7bf407ea561a293707b554dca5d983ac 496 SUPERFAMILY SSF51905 3 388 4.07E-48 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_15935 7bf407ea561a293707b554dca5d983ac 496 Gene3D G3DSA:3.50.50.60 1 156 8.4E-37 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_15935 7bf407ea561a293707b554dca5d983ac 496 Pfam PF00743 Flavin-binding monooxygenase-like 7 345 1.2E-16 T 23-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 CDG62_15935 7bf407ea561a293707b554dca5d983ac 496 Gene3D G3DSA:3.50.50.60 303 471 3.1E-5 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_15935 7bf407ea561a293707b554dca5d983ac 496 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.9E-6 T 23-10-2018 CDG62_15935 7bf407ea561a293707b554dca5d983ac 496 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 7.9E-6 T 23-10-2018 CDG62_13810 062cc93cbf557e379a8682f5783996ca 153 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 27 151 1.3E-26 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG62_13810 062cc93cbf557e379a8682f5783996ca 153 Gene3D G3DSA:2.40.128.520 23 153 7.0E-20 T 23-10-2018 CDG62_08180 7b10088170a45ee96925094f70b44556 193 SUPERFAMILY SSF52218 1 192 6.67E-40 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_08180 7b10088170a45ee96925094f70b44556 193 Pfam PF02525 Flavodoxin-like fold 2 188 4.2E-34 T 23-10-2018 IPR003680 Flavodoxin-like fold CDG62_08180 7b10088170a45ee96925094f70b44556 193 Gene3D G3DSA:3.40.50.360 1 193 4.0E-61 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_07780 67e12a8a13116575f66e4cf45626cc40 418 Pfam PF02308 MgtC family 20 135 1.0E-15 T 23-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CDG62_07780 67e12a8a13116575f66e4cf45626cc40 418 Pfam PF13194 Domain of unknown function (DUF4010) 185 389 1.4E-31 T 23-10-2018 IPR025105 Domain of unknown function DUF4010 CDG62_18205 7dc16510b3b6487029ea30c9521073bc 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 347 1.6E-74 T 23-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CDG62_18205 7dc16510b3b6487029ea30c9521073bc 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 344 5.9E-97 T 23-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CDG62_10960 d032f22532ca70a7dd77672d6d2a7951 314 Gene3D G3DSA:1.10.3720.10 112 305 4.6E-25 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_10960 d032f22532ca70a7dd77672d6d2a7951 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 137 306 4.7E-22 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_10960 d032f22532ca70a7dd77672d6d2a7951 314 SUPERFAMILY SSF161098 113 297 2.75E-30 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_16450 db5283d6b6e0730eb9aadac2921da664 269 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 5 266 5.2E-94 T 23-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CDG62_16450 db5283d6b6e0730eb9aadac2921da664 269 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 260 6.9E-99 T 23-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CDG62_16450 db5283d6b6e0730eb9aadac2921da664 269 Gene3D G3DSA:3.20.20.60 1 269 1.1E-96 T 23-10-2018 CDG62_16450 db5283d6b6e0730eb9aadac2921da664 269 PIRSF PIRSF000388 1 268 6.8E-91 T 23-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CDG62_16450 db5283d6b6e0730eb9aadac2921da664 269 SUPERFAMILY SSF51621 2 265 5.38E-94 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDG62_16450 db5283d6b6e0730eb9aadac2921da664 269 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 265 39.351 T 23-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CDG62_10460 7e91a159a0da49e3fd58e15fedeacd07 197 SUPERFAMILY SSF52972 2 191 2.75E-48 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDG62_10460 7e91a159a0da49e3fd58e15fedeacd07 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 190 3.7E-39 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG62_10460 7e91a159a0da49e3fd58e15fedeacd07 197 Hamap MF_00528 Septum formation protein Maf [maf]. 5 196 21.728 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG62_10460 7e91a159a0da49e3fd58e15fedeacd07 197 Gene3D G3DSA:3.90.950.10 4 196 3.8E-48 T 23-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CDG62_10460 7e91a159a0da49e3fd58e15fedeacd07 197 PIRSF PIRSF006305 1 196 1.7E-36 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG62_10460 7e91a159a0da49e3fd58e15fedeacd07 197 Pfam PF02545 Maf-like protein 5 191 4.0E-37 T 23-10-2018 IPR003697 Maf-like protein GO:0047429 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 Pfam PF02785 Biotin carboxylase C-terminal domain 337 441 3.4E-35 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1199 0.0 T 23-10-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 SMART SM00797 472 770 4.1E-160 T 23-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 SUPERFAMILY SSF51246 331 443 4.87E-35 T 23-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 Gene3D G3DSA:3.30.1360.40 790 884 1.2E-28 T 23-10-2018 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 Pfam PF00364 Biotin-requiring enzyme 1137 1198 4.0E-16 T 23-10-2018 IPR000089 Biotin/lipoyl attachment CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 SUPERFAMILY SSF51230 1126 1200 7.33E-20 T 23-10-2018 IPR011053 Single hybrid motif CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 450 774 2.4E-93 T 23-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 Gene3D G3DSA:2.40.100.10 888 1110 4.7E-92 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 SMART SM00796 805 1037 7.2E-94 T 23-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 Gene3D G3DSA:2.40.50.100 1134 1200 3.0E-22 T 23-10-2018 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 473 752 1.0E-85 T 23-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 SUPERFAMILY SSF50891 921 1052 1.9E-23 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 SUPERFAMILY SSF50891 633 758 1.14E-29 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 Gene3D G3DSA:3.30.470.130 1 446 4.8E-178 T 23-10-2018 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 Gene3D G3DSA:2.40.100.10 632 789 6.9E-58 T 23-10-2018 IPR029000 Cyclophilin-like domain superfamily CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 1.3E-64 T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 SMART SM00878 337 441 1.1E-47 T 23-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 SUPERFAMILY SSF56059 83 353 5.66E-66 T 23-10-2018 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 807 1026 2.0E-44 T 23-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.7E-40 T 23-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 SUPERFAMILY SSF160467 807 899 2.35E-19 T 23-10-2018 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1156 1173 - T 23-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 23-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CDG62_06400 5a530bf0b5ea795a482eae8dd57bfecb 1200 SUPERFAMILY SSF52440 1 111 7.12E-42 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG62_02425 6fb9f48d080b262899c0e77c03f71808 172 Gene3D G3DSA:3.40.960.10 64 172 1.3E-10 T 23-10-2018 CDG62_02425 6fb9f48d080b262899c0e77c03f71808 172 Pfam PF10881 Protein of unknown function (DUF2726) 60 168 4.7E-21 T 23-10-2018 IPR024402 Domain of unknown function DUF2726 CDG62_15355 de32ba57e47eb80de0e710b3d06ed1f4 249 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 33 151 2.7E-18 T 23-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CDG62_15355 de32ba57e47eb80de0e710b3d06ed1f4 249 Gene3D G3DSA:2.60.40.10 40 152 5.7E-8 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG62_15355 de32ba57e47eb80de0e710b3d06ed1f4 249 SUPERFAMILY SSF49354 28 149 4.97E-20 T 23-10-2018 IPR008962 PapD-like superfamily CDG62_19190 9510984000a8f09245bb61f2b1422568 386 SUPERFAMILY SSF52440 173 274 1.18E-30 T 23-10-2018 IPR016185 Pre-ATP-grasp domain superfamily CDG62_19190 9510984000a8f09245bb61f2b1422568 386 SUPERFAMILY SSF56059 2 383 2.9E-75 T 23-10-2018 CDG62_19190 9510984000a8f09245bb61f2b1422568 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 1.5E-126 T 23-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CDG62_19190 9510984000a8f09245bb61f2b1422568 386 Gene3D G3DSA:3.30.1490.330 258 342 1.0E-18 T 23-10-2018 CDG62_07390 d040e1dbd74813cd89fb7a0afacec7ee 320 SMART SM00978 188 318 1.9E-25 T 23-10-2018 IPR007379 Tim44-like domain CDG62_07390 d040e1dbd74813cd89fb7a0afacec7ee 320 Pfam PF04280 Tim44-like domain 203 318 8.6E-10 T 23-10-2018 IPR007379 Tim44-like domain CDG62_07390 d040e1dbd74813cd89fb7a0afacec7ee 320 SUPERFAMILY SSF54427 205 318 1.01E-5 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG62_12285 e76fa4513680e02b20d05f5f05dc4387 262 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_12285 e76fa4513680e02b20d05f5f05dc4387 262 PIRSF PIRSF039085 10 262 2.1E-106 T 23-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CDG62_12285 e76fa4513680e02b20d05f5f05dc4387 262 Pfam PF00005 ABC transporter 29 187 2.4E-34 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_12285 e76fa4513680e02b20d05f5f05dc4387 262 SMART SM00382 38 235 2.1E-18 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_12285 e76fa4513680e02b20d05f5f05dc4387 262 SUPERFAMILY SSF52540 14 257 6.19E-75 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12285 e76fa4513680e02b20d05f5f05dc4387 262 Gene3D G3DSA:3.40.50.300 10 261 6.4E-78 T 23-10-2018 CDG62_07600 5c2266825ad979a5d33a28892cfa56cc 803 Pfam PF00384 Molybdopterin oxidoreductase 122 503 2.5E-24 T 23-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_07600 5c2266825ad979a5d33a28892cfa56cc 803 Gene3D G3DSA:3.40.50.740 133 502 1.1E-69 T 23-10-2018 CDG62_07600 5c2266825ad979a5d33a28892cfa56cc 803 SUPERFAMILY SSF50692 655 780 1.31E-13 T 23-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily CDG62_07600 5c2266825ad979a5d33a28892cfa56cc 803 PIRSF PIRSF000144 6 781 0.0 T 23-10-2018 CDG62_07600 5c2266825ad979a5d33a28892cfa56cc 803 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 26 777 1.8E-286 T 23-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 CDG62_07600 5c2266825ad979a5d33a28892cfa56cc 803 Pfam PF01568 Molydopterin dinucleotide binding domain 665 772 4.3E-10 T 23-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 CDG62_07600 5c2266825ad979a5d33a28892cfa56cc 803 Gene3D G3DSA:3.40.228.10 198 425 1.1E-69 T 23-10-2018 CDG62_07600 5c2266825ad979a5d33a28892cfa56cc 803 SUPERFAMILY SSF53706 60 644 5.1E-145 T 23-10-2018 CDG62_18780 3d2150f3f6b09a622fffb7170ed7f816 86 SUPERFAMILY SSF47336 2 83 3.4E-14 T 23-10-2018 IPR036736 ACP-like superfamily CDG62_18780 3d2150f3f6b09a622fffb7170ed7f816 86 Gene3D G3DSA:1.10.1200.10 3 86 9.5E-21 T 23-10-2018 IPR036736 ACP-like superfamily CDG62_18780 3d2150f3f6b09a622fffb7170ed7f816 86 Pfam PF00550 Phosphopantetheine attachment site 6 80 7.6E-11 T 23-10-2018 IPR009081 Phosphopantetheine binding ACP domain CDG62_08205 c04c925709ef3a4c05d3dc2df0bb450d 121 Pfam PF04241 Protein of unknown function (DUF423) 16 102 4.9E-26 T 23-10-2018 IPR006696 Protein of unknown function DUF423 CDG62_15480 8325de7c5bb2fb5c24348847e2fbbcc0 266 Pfam PF02673 Bacitracin resistance protein BacA 9 260 7.9E-87 T 23-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CDG62_15480 8325de7c5bb2fb5c24348847e2fbbcc0 266 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 258 1.8E-78 T 23-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CDG62_15480 8325de7c5bb2fb5c24348847e2fbbcc0 266 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 265 18.609 T 23-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CDG62_09155 123d990c05806ada6610483e216ed6a9 268 Gene3D G3DSA:3.20.20.100 2 268 1.5E-87 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CDG62_09155 123d990c05806ada6610483e216ed6a9 268 SUPERFAMILY SSF51430 4 259 3.14E-78 T 23-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily CDG62_09155 123d990c05806ada6610483e216ed6a9 268 PRINTS PR00069 Aldo-keto reductase signature 26 50 2.9E-41 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG62_09155 123d990c05806ada6610483e216ed6a9 268 PRINTS PR00069 Aldo-keto reductase signature 82 100 2.9E-41 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG62_09155 123d990c05806ada6610483e216ed6a9 268 PRINTS PR00069 Aldo-keto reductase signature 115 132 2.9E-41 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG62_09155 123d990c05806ada6610483e216ed6a9 268 PRINTS PR00069 Aldo-keto reductase signature 187 211 2.9E-41 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG62_09155 123d990c05806ada6610483e216ed6a9 268 PRINTS PR00069 Aldo-keto reductase signature 150 179 2.9E-41 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG62_09155 123d990c05806ada6610483e216ed6a9 268 PIRSF PIRSF000097 1 265 2.6E-65 T 23-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CDG62_09155 123d990c05806ada6610483e216ed6a9 268 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 30 47 - T 23-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CDG62_09155 123d990c05806ada6610483e216ed6a9 268 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 115 132 - T 23-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CDG62_09155 123d990c05806ada6610483e216ed6a9 268 Pfam PF00248 Aldo/keto reductase family 8 251 2.1E-48 T 23-10-2018 IPR023210 NADP-dependent oxidoreductase domain CDG62_03040 f09bb238b23698b39efdd2ffca3dff25 1267 Gene3D G3DSA:2.60.40.10 901 1023 2.5E-8 T 23-10-2018 IPR013783 Immunoglobulin-like fold CDG62_03040 f09bb238b23698b39efdd2ffca3dff25 1267 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1186 1232 4.5E-7 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_03040 f09bb238b23698b39efdd2ffca3dff25 1267 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 451 498 5.3E-11 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_03040 f09bb238b23698b39efdd2ffca3dff25 1267 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 301 349 4.4E-7 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_03040 f09bb238b23698b39efdd2ffca3dff25 1267 Pfam PF01345 Domain of unknown function DUF11 1184 1264 7.7E-8 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_03040 f09bb238b23698b39efdd2ffca3dff25 1267 Pfam PF01345 Domain of unknown function DUF11 299 399 1.2E-8 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_03040 f09bb238b23698b39efdd2ffca3dff25 1267 Pfam PF01345 Domain of unknown function DUF11 449 524 2.3E-6 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_12295 a5dc1ff467826f5289455fb224955365 182 Pfam PF00583 Acetyltransferase (GNAT) family 50 146 4.9E-12 T 23-10-2018 IPR000182 GNAT domain CDG62_12295 a5dc1ff467826f5289455fb224955365 182 SUPERFAMILY SSF55729 11 156 1.21E-20 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_12295 a5dc1ff467826f5289455fb224955365 182 Gene3D G3DSA:3.40.630.30 4 166 3.0E-23 T 23-10-2018 CDG62_02750 9ce131133e95ea9ad9db72ddcc8c41c7 100 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 91 1.3E-8 T 23-10-2018 IPR009241 Toxin HigB-like CDG62_02750 9ce131133e95ea9ad9db72ddcc8c41c7 100 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 95 2.1E-40 T 23-10-2018 IPR014056 Addiction module killer protein, predicted CDG62_02750 9ce131133e95ea9ad9db72ddcc8c41c7 100 PIRSF PIRSF028744 1 100 3.3E-42 T 23-10-2018 IPR014056 Addiction module killer protein, predicted CDG62_11310 f7b2c6fdb12b64bbef4aba050c6a37a6 451 Pfam PF00860 Permease family 33 400 2.5E-91 T 23-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CDG62_11310 f7b2c6fdb12b64bbef4aba050c6a37a6 451 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 30 425 1.7E-104 T 23-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CDG62_11310 f7b2c6fdb12b64bbef4aba050c6a37a6 451 TIGRFAM TIGR03616 RutG: pyrimidine utilization transport protein G 4 429 2.4E-232 T 23-10-2018 IPR019918 Pyrimidine permease RutG, predicted GO:0006864|GO:0015218 CDG62_14310 1ec6100e03313a6d12b56ec7c2079a77 176 PIRSF PIRSF011484 1 176 5.2E-57 T 23-10-2018 IPR009822 YaeQ CDG62_14310 1ec6100e03313a6d12b56ec7c2079a77 176 Gene3D G3DSA:3.10.640.10 1 176 1.8E-65 T 23-10-2018 IPR038590 YaeQ superfamily CDG62_14310 1ec6100e03313a6d12b56ec7c2079a77 176 SMART SM01322 1 174 1.0E-88 T 23-10-2018 IPR009822 YaeQ CDG62_14310 1ec6100e03313a6d12b56ec7c2079a77 176 Pfam PF07152 YaeQ protein 1 170 6.4E-63 T 23-10-2018 IPR009822 YaeQ CDG62_14310 1ec6100e03313a6d12b56ec7c2079a77 176 SUPERFAMILY SSF52980 2 176 8.31E-60 T 23-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CDG62_08405 ad08f899781203eed2453ee5b226508b 449 Gene3D G3DSA:1.20.1250.20 16 209 7.5E-40 T 23-10-2018 CDG62_08405 ad08f899781203eed2453ee5b226508b 449 SUPERFAMILY SSF103473 19 430 7.19E-55 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_08405 ad08f899781203eed2453ee5b226508b 449 Gene3D G3DSA:1.20.1250.20 229 437 1.6E-30 T 23-10-2018 CDG62_08405 ad08f899781203eed2453ee5b226508b 449 Pfam PF07690 Major Facilitator Superfamily 30 353 1.5E-24 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_01750 e52e8a3a6eda72ead193ce3442f0e074 153 Gene3D G3DSA:2.40.128.270 32 148 4.7E-25 T 23-10-2018 IPR038670 HslJ-like superfamily CDG62_01750 e52e8a3a6eda72ead193ce3442f0e074 153 Pfam PF03724 META domain 37 145 1.4E-25 T 23-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ CDG62_16380 8bf428358d082a2ab1a76a26fcd96e29 64 Pfam PF01632 Ribosomal protein L35 2 60 1.8E-24 T 23-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_16380 8bf428358d082a2ab1a76a26fcd96e29 64 Gene3D G3DSA:2.40.50.530 4 63 4.9E-22 T 23-10-2018 CDG62_16380 8bf428358d082a2ab1a76a26fcd96e29 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.2E-19 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDG62_16380 8bf428358d082a2ab1a76a26fcd96e29 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 4.2E-19 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDG62_16380 8bf428358d082a2ab1a76a26fcd96e29 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 4.2E-19 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDG62_16380 8bf428358d082a2ab1a76a26fcd96e29 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.545 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDG62_16380 8bf428358d082a2ab1a76a26fcd96e29 64 SUPERFAMILY SSF143034 2 63 1.83E-22 T 23-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_16380 8bf428358d082a2ab1a76a26fcd96e29 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 23-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_16380 8bf428358d082a2ab1a76a26fcd96e29 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 2.2E-26 T 23-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CDG62_09320 d564fd1e9c7286df3e370834919abdab 227 Pfam PF01863 Protein of unknown function DUF45 19 217 1.0E-44 T 23-10-2018 IPR002725 Protein of unknown function DUF45 CDG62_09320 d564fd1e9c7286df3e370834919abdab 227 Gene3D G3DSA:3.30.2010.10 127 220 1.9E-16 T 23-10-2018 CDG62_01360 c56893cac91986ab6bf0c01783ab3d67 1001 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 17 761 1.7E-65 T 23-10-2018 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY CDG62_10300 c34a3e687f9ec219efe3c02cdc6c54c0 291 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 33 279 27.673 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_10300 c34a3e687f9ec219efe3c02cdc6c54c0 291 PIRSF PIRSF000513 25 287 2.4E-76 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_10300 c34a3e687f9ec219efe3c02cdc6c54c0 291 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 83 91 9.6E-24 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_10300 c34a3e687f9ec219efe3c02cdc6c54c0 291 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 109 126 9.6E-24 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_10300 c34a3e687f9ec219efe3c02cdc6c54c0 291 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 140 154 9.6E-24 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_10300 c34a3e687f9ec219efe3c02cdc6c54c0 291 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 183 200 9.6E-24 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_10300 c34a3e687f9ec219efe3c02cdc6c54c0 291 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 52 73 9.6E-24 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_10300 c34a3e687f9ec219efe3c02cdc6c54c0 291 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 39 46 9.6E-24 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_10300 c34a3e687f9ec219efe3c02cdc6c54c0 291 Pfam PF02110 Hydroxyethylthiazole kinase family 33 276 3.4E-66 T 23-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_10300 c34a3e687f9ec219efe3c02cdc6c54c0 291 Gene3D G3DSA:3.40.1190.20 5 288 1.0E-79 T 23-10-2018 IPR029056 Ribokinase-like CDG62_10300 c34a3e687f9ec219efe3c02cdc6c54c0 291 SUPERFAMILY SSF53613 28 286 1.27E-50 T 23-10-2018 IPR029056 Ribokinase-like CDG62_07740 960608694ebe96b4d1130ee3b6dd1cf6 143 SMART SM00422 10 79 5.9E-21 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_07740 960608694ebe96b4d1130ee3b6dd1cf6 143 Pfam PF00376 MerR family regulatory protein 13 48 8.5E-12 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_07740 960608694ebe96b4d1130ee3b6dd1cf6 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 22 35 1.0E-5 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_07740 960608694ebe96b4d1130ee3b6dd1cf6 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 46 66 1.0E-5 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_07740 960608694ebe96b4d1130ee3b6dd1cf6 143 Gene3D G3DSA:1.10.1660.10 1 135 1.2E-30 T 23-10-2018 CDG62_07740 960608694ebe96b4d1130ee3b6dd1cf6 143 SUPERFAMILY SSF46955 12 133 2.64E-30 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily CDG62_07740 960608694ebe96b4d1130ee3b6dd1cf6 143 Pfam PF09278 MerR, DNA binding 53 117 5.0E-16 T 23-10-2018 IPR015358 Transcription regulator MerR, DNA binding CDG62_13645 7c6b41af69941d87dab280c3ab0c1331 382 SUPERFAMILY SSF69189 273 365 6.87E-25 T 23-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG62_13645 7c6b41af69941d87dab280c3ab0c1331 382 SUPERFAMILY SSF56601 5 273 1.84E-76 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG62_13645 7c6b41af69941d87dab280c3ab0c1331 382 SMART SM00936 273 363 7.7E-35 T 23-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG62_13645 7c6b41af69941d87dab280c3ab0c1331 382 Gene3D G3DSA:3.40.710.10 17 271 4.1E-83 T 23-10-2018 CDG62_13645 7c6b41af69941d87dab280c3ab0c1331 382 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 253 4.7E-78 T 23-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CDG62_13645 7c6b41af69941d87dab280c3ab0c1331 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 7.3E-17 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG62_13645 7c6b41af69941d87dab280c3ab0c1331 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 57 68 7.3E-17 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG62_13645 7c6b41af69941d87dab280c3ab0c1331 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 7.3E-17 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG62_13645 7c6b41af69941d87dab280c3ab0c1331 382 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 273 363 1.9E-24 T 23-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG62_13645 7c6b41af69941d87dab280c3ab0c1331 382 Gene3D G3DSA:2.60.410.10 273 363 2.7E-30 T 23-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CDG62_11045 2a77638d0565f744cd0b4fcc05689d1f 802 Pfam PF00884 Sulfatase 84 498 3.6E-79 T 23-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 CDG62_11045 2a77638d0565f744cd0b4fcc05689d1f 802 SUPERFAMILY SSF49899 656 799 4.59E-6 T 23-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CDG62_11045 2a77638d0565f744cd0b4fcc05689d1f 802 ProSitePatterns PS00523 Sulfatases signature 1. 128 140 - T 23-10-2018 IPR024607 Sulfatase, conserved site CDG62_11045 2a77638d0565f744cd0b4fcc05689d1f 802 Gene3D G3DSA:3.30.1120.10 527 620 3.8E-22 T 23-10-2018 CDG62_11045 2a77638d0565f744cd0b4fcc05689d1f 802 SUPERFAMILY SSF53649 84 609 8.72E-128 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG62_11045 2a77638d0565f744cd0b4fcc05689d1f 802 Gene3D G3DSA:3.40.720.10 82 525 3.2E-111 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG62_05845 4873aad0a1138c7e7ea36a52f7b4d84b 224 Pfam PF04172 LrgB-like family 11 218 9.5E-51 T 23-10-2018 IPR007300 CidB/LrgB family CDG62_15515 20fa6be8b2e8398cf1ff71a3e391498a 381 SUPERFAMILY SSF53756 5 375 1.75E-115 T 23-10-2018 CDG62_15515 20fa6be8b2e8398cf1ff71a3e391498a 381 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 373 3.4E-109 T 23-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 CDG62_15515 20fa6be8b2e8398cf1ff71a3e391498a 381 Gene3D G3DSA:3.40.50.2000 7 370 8.3E-132 T 23-10-2018 CDG62_15515 20fa6be8b2e8398cf1ff71a3e391498a 381 Gene3D G3DSA:3.40.50.2000 190 360 8.3E-132 T 23-10-2018 CDG62_15515 20fa6be8b2e8398cf1ff71a3e391498a 381 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 374 1.1E-130 T 23-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CDG62_08755 0a07d6bdceda50fdc966e6edc0218bb2 333 SUPERFAMILY SSF51679 8 329 4.58E-85 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG62_08755 0a07d6bdceda50fdc966e6edc0218bb2 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 329 3.0E-128 T 23-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 CDG62_08755 0a07d6bdceda50fdc966e6edc0218bb2 333 Gene3D G3DSA:3.20.20.30 5 332 6.5E-94 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG62_08755 0a07d6bdceda50fdc966e6edc0218bb2 333 Pfam PF00296 Luciferase-like monooxygenase 24 298 3.0E-39 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CDG62_05280 d8434ef23303595d2221e250e29715c1 768 Pfam PF00577 Outer membrane usher protein 152 667 5.7E-35 T 23-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 CDG62_05280 d8434ef23303595d2221e250e29715c1 768 Gene3D G3DSA:2.60.40.2610 592 690 6.8E-6 T 23-10-2018 CDG62_05280 d8434ef23303595d2221e250e29715c1 768 Gene3D G3DSA:2.60.40.3110 223 305 1.6E-8 T 23-10-2018 CDG62_03910 740a844569034a1c5e887468507eefb2 388 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 97 145 2.6E-6 T 23-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDG62_03910 740a844569034a1c5e887468507eefb2 388 SUPERFAMILY SSF56349 96 376 3.24E-59 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG62_03910 740a844569034a1c5e887468507eefb2 388 Gene3D G3DSA:3.30.160.390 1 87 1.5E-29 T 23-10-2018 IPR038488 Integrase, DNA-binding domain superfamily CDG62_03910 740a844569034a1c5e887468507eefb2 388 Pfam PF13356 Arm DNA-binding domain 2 86 6.1E-20 T 23-10-2018 IPR025166 Integrase, DNA-binding domain CDG62_03910 740a844569034a1c5e887468507eefb2 388 Gene3D G3DSA:1.10.150.130 93 205 1.2E-27 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG62_03910 740a844569034a1c5e887468507eefb2 388 Pfam PF00589 Phage integrase family 216 366 3.1E-20 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG62_03910 740a844569034a1c5e887468507eefb2 388 Gene3D G3DSA:1.10.443.10 206 380 2.6E-13 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG62_17005 073c838be5388500f1234328f656ad8e 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 23-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_17005 073c838be5388500f1234328f656ad8e 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.423 T 23-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_17005 073c838be5388500f1234328f656ad8e 51 SUPERFAMILY SSF57829 1 49 6.71E-19 T 23-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CDG62_17005 073c838be5388500f1234328f656ad8e 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 3.6E-25 T 23-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_17005 073c838be5388500f1234328f656ad8e 51 Gene3D G3DSA:2.20.28.120 1 51 2.6E-28 T 23-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_17005 073c838be5388500f1234328f656ad8e 51 Pfam PF00471 Ribosomal protein L33 4 49 2.8E-18 T 23-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_14470 0f762c3e30f81f30904d0cd85b14d4cd 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.563 T 23-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CDG62_14470 0f762c3e30f81f30904d0cd85b14d4cd 377 Pfam PF01546 Peptidase family M20/M25/M40 64 373 9.5E-45 T 23-10-2018 IPR002933 Peptidase M20 GO:0016787 CDG62_14470 0f762c3e30f81f30904d0cd85b14d4cd 377 Gene3D G3DSA:3.30.70.360 181 294 1.5E-132 T 23-10-2018 CDG62_14470 0f762c3e30f81f30904d0cd85b14d4cd 377 SUPERFAMILY SSF55031 181 290 1.44E-32 T 23-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain CDG62_14470 0f762c3e30f81f30904d0cd85b14d4cd 377 Gene3D G3DSA:3.40.630.10 12 364 1.5E-132 T 23-10-2018 CDG62_14470 0f762c3e30f81f30904d0cd85b14d4cd 377 SUPERFAMILY SSF53187 5 375 2.24E-64 T 23-10-2018 CDG62_14470 0f762c3e30f81f30904d0cd85b14d4cd 377 Pfam PF07687 Peptidase dimerisation domain 177 282 1.9E-24 T 23-10-2018 IPR011650 Peptidase M20, dimerisation domain CDG62_14470 0f762c3e30f81f30904d0cd85b14d4cd 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 8 374 1.6E-168 T 23-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CDG62_13870 9ad9132015931329d2814ebe49742a12 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 118 6.6E-6 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDG62_13870 9ad9132015931329d2814ebe49742a12 126 SUPERFAMILY SSF54593 1 125 1.88E-18 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_13870 9ad9132015931329d2814ebe49742a12 126 Gene3D G3DSA:3.10.180.10 5 125 9.6E-22 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 Hamap MF_01201 Alanine racemase. 2 365 31.516 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 Pfam PF01168 Alanine racemase, N-terminal domain 9 221 4.1E-60 T 23-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 Gene3D G3DSA:2.40.37.10 9 360 3.2E-108 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 TIGRFAM TIGR00492 alr: alanine racemase 3 361 2.2E-107 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 Pfam PF00842 Alanine racemase, C-terminal domain 236 361 4.2E-40 T 23-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 23-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 SMART SM01005 236 365 8.1E-60 T 23-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 PRINTS PR00992 Alanine racemase signature 347 360 8.7E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 PRINTS PR00992 Alanine racemase signature 155 166 8.7E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 PRINTS PR00992 Alanine racemase signature 269 284 8.7E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 PRINTS PR00992 Alanine racemase signature 252 267 8.7E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 PRINTS PR00992 Alanine racemase signature 121 133 8.7E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 PRINTS PR00992 Alanine racemase signature 194 221 8.7E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 PRINTS PR00992 Alanine racemase signature 290 307 8.7E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 PRINTS PR00992 Alanine racemase signature 27 43 8.7E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 PRINTS PR00992 Alanine racemase signature 61 79 8.7E-63 T 23-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 SUPERFAMILY SSF51419 9 237 1.83E-58 T 23-10-2018 IPR029066 PLP-binding barrel CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 Gene3D G3DSA:3.20.20.10 11 219 3.2E-108 T 23-10-2018 IPR029066 PLP-binding barrel CDG62_15995 2c2494d2d6e1bf11e3040e85696ec105 365 SUPERFAMILY SSF50621 229 361 2.79E-43 T 23-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CDG62_04260 d3af62d5339ee2e552cadcd951942f19 154 Pfam PF00210 Ferritin-like domain 8 142 8.5E-30 T 23-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CDG62_04260 d3af62d5339ee2e552cadcd951942f19 154 SUPERFAMILY SSF47240 1 154 2.93E-41 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG62_04260 d3af62d5339ee2e552cadcd951942f19 154 Gene3D G3DSA:1.20.1260.10 1 154 2.4E-54 T 23-10-2018 IPR012347 Ferritin-like CDG62_04260 d3af62d5339ee2e552cadcd951942f19 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 153 3.1E-59 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_04260 d3af62d5339ee2e552cadcd951942f19 154 PIRSF PIRSF002560 1 154 8.5E-59 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_04260 d3af62d5339ee2e552cadcd951942f19 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_04260 d3af62d5339ee2e552cadcd951942f19 154 PRINTS PR00601 Bacterioferritin signature 107 127 2.3E-52 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_04260 d3af62d5339ee2e552cadcd951942f19 154 PRINTS PR00601 Bacterioferritin signature 3 22 2.3E-52 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_04260 d3af62d5339ee2e552cadcd951942f19 154 PRINTS PR00601 Bacterioferritin signature 44 64 2.3E-52 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_04260 d3af62d5339ee2e552cadcd951942f19 154 PRINTS PR00601 Bacterioferritin signature 128 149 2.3E-52 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_04260 d3af62d5339ee2e552cadcd951942f19 154 PRINTS PR00601 Bacterioferritin signature 23 43 2.3E-52 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_04260 d3af62d5339ee2e552cadcd951942f19 154 PRINTS PR00601 Bacterioferritin signature 86 106 2.3E-52 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_04260 d3af62d5339ee2e552cadcd951942f19 154 PRINTS PR00601 Bacterioferritin signature 65 85 2.3E-52 T 23-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CDG62_01065 f3a79ca27ad05ee8dd969aba6ce0bd24 259 Pfam PF01435 Peptidase family M48 69 252 7.8E-27 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDG62_16900 5b7e5fe5fa33a223ea6c8895e16d42b5 73 Pfam PF02416 mttA/Hcf106 family 4 51 1.9E-12 T 23-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CDG62_16900 5b7e5fe5fa33a223ea6c8895e16d42b5 73 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 49 2.2E-18 T 23-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CDG62_16900 5b7e5fe5fa33a223ea6c8895e16d42b5 73 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 72 20.312 T 23-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CDG62_16405 9ac9de4b5ff2c51f4d1646fd3bd95141 206 Gene3D G3DSA:3.40.30.10 2 203 3.0E-86 T 23-10-2018 CDG62_16405 9ac9de4b5ff2c51f4d1646fd3bd95141 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 109 195 2.3E-10 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal CDG62_16405 9ac9de4b5ff2c51f4d1646fd3bd95141 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 6 80 1.9E-14 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG62_16405 9ac9de4b5ff2c51f4d1646fd3bd95141 206 Gene3D G3DSA:1.20.1050.10 87 194 3.0E-86 T 23-10-2018 CDG62_16405 9ac9de4b5ff2c51f4d1646fd3bd95141 206 SUPERFAMILY SSF52833 1 83 3.39E-22 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_16405 9ac9de4b5ff2c51f4d1646fd3bd95141 206 SUPERFAMILY SSF47616 77 203 2.59E-37 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG62_17340 38af2abb91a1bfafc7908fb051f5a032 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 688 3.7E-234 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17340 38af2abb91a1bfafc7908fb051f5a032 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.3E-31 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17340 38af2abb91a1bfafc7908fb051f5a032 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.3E-31 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17340 38af2abb91a1bfafc7908fb051f5a032 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.3E-31 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17340 38af2abb91a1bfafc7908fb051f5a032 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.3E-31 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17340 38af2abb91a1bfafc7908fb051f5a032 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.3E-31 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17340 38af2abb91a1bfafc7908fb051f5a032 689 SUPERFAMILY SSF109604 337 491 2.42E-17 T 23-10-2018 CDG62_17340 38af2abb91a1bfafc7908fb051f5a032 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 687 24.824 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_17340 38af2abb91a1bfafc7908fb051f5a032 689 Pfam PF05746 DALR anticodon binding domain 582 678 3.0E-8 T 23-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CDG62_17340 38af2abb91a1bfafc7908fb051f5a032 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 550 1.4E-200 T 23-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CDG62_00565 f32e47e388d01110b5d77de68cce64fb 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 8 87 7.0E-42 T 23-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 CDG62_00565 f32e47e388d01110b5d77de68cce64fb 87 Gene3D G3DSA:3.30.2310.20 4 87 6.4E-42 T 23-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CDG62_00565 f32e47e388d01110b5d77de68cce64fb 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 8 87 1.3E-36 T 23-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 CDG62_00565 f32e47e388d01110b5d77de68cce64fb 87 SUPERFAMILY SSF143011 6 86 9.16E-29 T 23-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CDG62_11065 5b96abe1ee180c3c02c0c9281de76018 312 SUPERFAMILY SSF46785 11 118 1.09E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_11065 5b96abe1ee180c3c02c0c9281de76018 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 2.7E-15 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_11065 5b96abe1ee180c3c02c0c9281de76018 312 Gene3D G3DSA:1.10.10.10 9 94 2.1E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_11065 5b96abe1ee180c3c02c0c9281de76018 312 Gene3D G3DSA:3.40.190.10 170 271 1.9E-54 T 23-10-2018 CDG62_11065 5b96abe1ee180c3c02c0c9281de76018 312 SUPERFAMILY SSF53850 95 301 6.83E-38 T 23-10-2018 CDG62_11065 5b96abe1ee180c3c02c0c9281de76018 312 Pfam PF03466 LysR substrate binding domain 95 298 8.7E-36 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_11065 5b96abe1ee180c3c02c0c9281de76018 312 Gene3D G3DSA:3.40.190.10 97 296 1.9E-54 T 23-10-2018 CDG62_06495 d0118e643bfc1051738cf5fce556f25b 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 96 1.2E-22 T 23-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CDG62_06495 d0118e643bfc1051738cf5fce556f25b 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 18.135 T 23-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CDG62_15565 72bddee859635c64c2944a80b4c0db18 190 SUPERFAMILY SSF54427 49 167 5.62E-13 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG62_15565 72bddee859635c64c2944a80b4c0db18 190 Gene3D G3DSA:3.10.450.50 50 177 1.4E-6 T 23-10-2018 CDG62_08490 9b6f0afd1d676a190f3f0c6ea97a41f1 180 Gene3D G3DSA:2.60.450.10 58 180 2.0E-7 T 23-10-2018 CDG62_08490 9b6f0afd1d676a190f3f0c6ea97a41f1 180 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 178 7.8E-32 T 23-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CDG62_08490 9b6f0afd1d676a190f3f0c6ea97a41f1 180 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 179 1.8E-27 T 23-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related CDG62_18785 37c0528c0325685566578ab1781a53b4 270 Pfam PF01553 Acyltransferase 80 202 2.5E-14 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_18785 37c0528c0325685566578ab1781a53b4 270 SUPERFAMILY SSF69593 66 252 8.89E-31 T 23-10-2018 CDG62_18785 37c0528c0325685566578ab1781a53b4 270 SMART SM00563 93 204 8.1E-15 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_08660 c7a2066443569a5e73937744512fadd7 244 Gene3D G3DSA:3.60.20.10 2 237 3.4E-30 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG62_08660 c7a2066443569a5e73937744512fadd7 244 SUPERFAMILY SSF56235 2 236 8.75E-39 T 23-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CDG62_08660 c7a2066443569a5e73937744512fadd7 244 Pfam PF00227 Proteasome subunit 4 173 4.3E-10 T 23-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 CDG62_08660 c7a2066443569a5e73937744512fadd7 244 PIRSF PIRSF009120 1 243 5.2E-106 T 23-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 CDG62_13680 578780b93a81d1c43a1e91ad2efbae7e 462 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 10 455 7.8E-130 T 23-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CDG62_13680 578780b93a81d1c43a1e91ad2efbae7e 462 Pfam PF08328 Adenylosuccinate lyase C-terminal 328 445 2.6E-45 T 23-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 CDG62_13680 578780b93a81d1c43a1e91ad2efbae7e 462 Gene3D G3DSA:1.10.40.30 379 445 4.8E-147 T 23-10-2018 CDG62_13680 578780b93a81d1c43a1e91ad2efbae7e 462 Gene3D G3DSA:1.20.200.10 116 446 4.8E-147 T 23-10-2018 CDG62_13680 578780b93a81d1c43a1e91ad2efbae7e 462 ProSitePatterns PS00163 Fumarate lyases signature. 291 300 - T 23-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CDG62_13680 578780b93a81d1c43a1e91ad2efbae7e 462 SUPERFAMILY SSF48557 8 455 1.88E-105 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 CDG62_13680 578780b93a81d1c43a1e91ad2efbae7e 462 Pfam PF00206 Lyase 12 309 1.9E-65 T 23-10-2018 IPR022761 Fumarate lyase, N-terminal CDG62_13680 578780b93a81d1c43a1e91ad2efbae7e 462 PRINTS PR00149 Fumarate lyase superfamily signature 160 178 1.1E-17 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_13680 578780b93a81d1c43a1e91ad2efbae7e 462 PRINTS PR00149 Fumarate lyase superfamily signature 115 133 1.1E-17 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_13680 578780b93a81d1c43a1e91ad2efbae7e 462 PRINTS PR00149 Fumarate lyase superfamily signature 248 275 1.1E-17 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_13680 578780b93a81d1c43a1e91ad2efbae7e 462 PRINTS PR00149 Fumarate lyase superfamily signature 291 307 1.1E-17 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_13680 578780b93a81d1c43a1e91ad2efbae7e 462 Gene3D G3DSA:1.10.275.10 1 115 1.8E-47 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal CDG62_11485 fb068ff4760ffa522208b2590598d4e2 200 Gene3D G3DSA:3.40.109.10 2 200 5.1E-80 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG62_11485 fb068ff4760ffa522208b2590598d4e2 200 SUPERFAMILY SSF55469 3 199 7.2E-65 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG62_11485 fb068ff4760ffa522208b2590598d4e2 200 Pfam PF00881 Nitroreductase family 9 178 1.1E-13 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDG62_12095 0f6eda37284b92aeeba63eff5e1bdd1f 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 12 190 7.7E-29 T 23-10-2018 CDG62_12095 0f6eda37284b92aeeba63eff5e1bdd1f 218 SUPERFAMILY SSF56784 9 199 1.63E-19 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_12095 0f6eda37284b92aeeba63eff5e1bdd1f 218 Gene3D G3DSA:1.20.1440.100 23 94 3.3E-30 T 23-10-2018 CDG62_12095 0f6eda37284b92aeeba63eff5e1bdd1f 218 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 11 193 2.2E-20 T 23-10-2018 CDG62_12095 0f6eda37284b92aeeba63eff5e1bdd1f 218 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 11 201 1.1E-31 T 23-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CDG62_12095 0f6eda37284b92aeeba63eff5e1bdd1f 218 Gene3D G3DSA:3.40.50.1000 11 209 3.3E-30 T 23-10-2018 IPR023214 HAD superfamily CDG62_15290 8faac50e6cfd799e2128bd00a3ad0f53 236 Pfam PF04172 LrgB-like family 13 224 2.5E-58 T 23-10-2018 IPR007300 CidB/LrgB family CDG62_04225 259c9aa0de8f94484b6e327bd6183d20 292 Pfam PF10118 Predicted metal-dependent hydrolase 21 263 2.1E-74 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG62_04225 259c9aa0de8f94484b6e327bd6183d20 292 PIRSF PIRSF007580 4 281 2.1E-66 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG62_18240 7762cf6b09e6c1856e1377aa61217a38 367 Pfam PF01872 RibD C-terminal domain 156 356 4.5E-43 T 23-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CDG62_18240 7762cf6b09e6c1856e1377aa61217a38 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 12 108 1.1E-21 T 23-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CDG62_18240 7762cf6b09e6c1856e1377aa61217a38 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 155 360 1.5E-52 T 23-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CDG62_18240 7762cf6b09e6c1856e1377aa61217a38 367 Gene3D G3DSA:3.40.430.10 150 367 9.2E-70 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDG62_18240 7762cf6b09e6c1856e1377aa61217a38 367 SUPERFAMILY SSF53927 12 153 1.52E-46 T 23-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CDG62_18240 7762cf6b09e6c1856e1377aa61217a38 367 Gene3D G3DSA:3.40.140.10 2 149 2.3E-48 T 23-10-2018 CDG62_18240 7762cf6b09e6c1856e1377aa61217a38 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 97 - T 23-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CDG62_18240 7762cf6b09e6c1856e1377aa61217a38 367 SUPERFAMILY SSF53597 153 359 1.96E-52 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDG62_18240 7762cf6b09e6c1856e1377aa61217a38 367 PIRSF PIRSF006769 8 365 6.2E-122 T 23-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 CDG62_18240 7762cf6b09e6c1856e1377aa61217a38 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 16 358 6.1E-120 T 23-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 CDG62_03395 6a202dcdf4b911c8f37aceef32d75edc 543 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 250 540 7.0E-128 T 23-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type CDG62_03395 6a202dcdf4b911c8f37aceef32d75edc 543 Pfam PF02653 Branched-chain amino acid transport system / permease component 252 526 1.5E-50 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDG62_14855 216903b2c12beac99a9081388d32dd7c 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 225 232 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDG62_14855 216903b2c12beac99a9081388d32dd7c 481 Pfam PF00171 Aldehyde dehydrogenase family 26 447 5.3E-73 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG62_14855 216903b2c12beac99a9081388d32dd7c 481 Gene3D G3DSA:3.40.309.10 229 429 4.1E-138 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG62_14855 216903b2c12beac99a9081388d32dd7c 481 Gene3D G3DSA:3.40.605.10 26 449 4.1E-138 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG62_14855 216903b2c12beac99a9081388d32dd7c 481 SUPERFAMILY SSF53720 22 465 1.7E-100 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG62_14855 216903b2c12beac99a9081388d32dd7c 481 PIRSF PIRSF036492 5 481 1.2E-147 T 23-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 CDG62_15080 b840a1cdc1033cab9cd25423c346378d 234 SMART SM00882 5 217 9.1E-88 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_15080 b840a1cdc1033cab9cd25423c346378d 234 SUPERFAMILY SSF100950 2 226 5.56E-85 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG62_15080 b840a1cdc1033cab9cd25423c346378d 234 Gene3D G3DSA:3.40.1080.10 1 227 5.2E-94 T 23-10-2018 CDG62_15080 b840a1cdc1033cab9cd25423c346378d 234 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 216 5.3E-79 T 23-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CDG62_15080 b840a1cdc1033cab9cd25423c346378d 234 Pfam PF01144 Coenzyme A transferase 6 217 2.6E-78 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_15265 65654d592946b2cd3d7589ac0c491d7c 486 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 439 1.5E-168 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CDG62_15265 65654d592946b2cd3d7589ac0c491d7c 486 PIRSF PIRSF006446 3 465 1.6E-208 T 23-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CDG62_09025 a7ce0c9eb17b80172211df30395f99e5 164 Pfam PF03938 Outer membrane protein (OmpH-like) 8 159 1.5E-21 T 23-10-2018 IPR005632 Chaperone protein Skp GO:0051082 CDG62_09025 a7ce0c9eb17b80172211df30395f99e5 164 Gene3D G3DSA:3.30.910.20 12 164 1.9E-23 T 23-10-2018 IPR024930 Skp domain superfamily CDG62_09025 a7ce0c9eb17b80172211df30395f99e5 164 SUPERFAMILY SSF111384 20 161 1.19E-21 T 23-10-2018 CDG62_09025 a7ce0c9eb17b80172211df30395f99e5 164 SMART SM00935 8 161 2.2E-27 T 23-10-2018 IPR005632 Chaperone protein Skp GO:0051082 CDG62_04990 4301bc08eac7cf3e8cb4868d2d22f737 358 SUPERFAMILY SSF52540 118 294 6.32E-40 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_04990 4301bc08eac7cf3e8cb4868d2d22f737 358 Gene3D G3DSA:3.40.50.300 116 322 2.1E-75 T 23-10-2018 CDG62_04990 4301bc08eac7cf3e8cb4868d2d22f737 358 Pfam PF02562 PhoH-like protein 119 322 3.5E-95 T 23-10-2018 IPR003714 PhoH-like protein GO:0005524 CDG62_16885 cd767918a3c8b50e3a64c9a134aac265 196 SUPERFAMILY SSF81901 43 153 7.98E-24 T 23-10-2018 CDG62_16885 cd767918a3c8b50e3a64c9a134aac265 196 SMART SM00671 54 89 1.5E-7 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_16885 cd767918a3c8b50e3a64c9a134aac265 196 SMART SM00671 90 125 3.8E-8 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_16885 cd767918a3c8b50e3a64c9a134aac265 196 Pfam PF08238 Sel1 repeat 54 88 9.9E-6 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_16885 cd767918a3c8b50e3a64c9a134aac265 196 Pfam PF08238 Sel1 repeat 139 153 83.0 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_16885 cd767918a3c8b50e3a64c9a134aac265 196 Pfam PF08238 Sel1 repeat 90 125 8.5E-9 T 23-10-2018 IPR006597 Sel1-like repeat CDG62_16885 cd767918a3c8b50e3a64c9a134aac265 196 Gene3D G3DSA:1.25.40.10 26 196 7.3E-34 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_11395 43b7cd39d87352e802c83abffe6f62ea 397 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 204 218 - T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG62_11395 43b7cd39d87352e802c83abffe6f62ea 397 SUPERFAMILY SSF52540 12 348 3.71E-68 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_11395 43b7cd39d87352e802c83abffe6f62ea 397 Gene3D G3DSA:3.30.450.90 5 111 4.6E-28 T 23-10-2018 CDG62_11395 43b7cd39d87352e802c83abffe6f62ea 397 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 14 355 6.9E-138 T 23-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 CDG62_11395 43b7cd39d87352e802c83abffe6f62ea 397 Gene3D G3DSA:3.40.50.300 112 369 1.1E-89 T 23-10-2018 CDG62_11395 43b7cd39d87352e802c83abffe6f62ea 397 Pfam PF00437 Type II/IV secretion system protein 124 282 2.5E-38 T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG62_04970 3839a686aaf36629bc4f5c4aa50e4e8c 285 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 198 257 1.5E-12 T 23-10-2018 IPR037682 TonB, C-terminal GO:0055085 CDG62_04970 3839a686aaf36629bc4f5c4aa50e4e8c 285 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 200 277 1.0E-14 T 23-10-2018 IPR006260 TonB/TolA, C-terminal CDG62_04970 3839a686aaf36629bc4f5c4aa50e4e8c 285 SUPERFAMILY SSF74653 179 278 2.09E-16 T 23-10-2018 CDG62_14115 3da393c05dc490d3a29c761bb4bf8426 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 23-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 CDG62_14115 3da393c05dc490d3a29c761bb4bf8426 54 PIRSF PIRSF000071 1 54 3.5E-25 T 23-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 CDG62_14115 3da393c05dc490d3a29c761bb4bf8426 54 Gene3D G3DSA:2.20.28.10 1 54 3.4E-28 T 23-10-2018 CDG62_14115 3da393c05dc490d3a29c761bb4bf8426 54 SUPERFAMILY SSF57802 1 53 1.57E-22 T 23-10-2018 CDG62_14115 3da393c05dc490d3a29c761bb4bf8426 54 PRINTS PR00163 Rubredoxin signature 3 19 1.6E-10 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 CDG62_14115 3da393c05dc490d3a29c761bb4bf8426 54 PRINTS PR00163 Rubredoxin signature 33 49 1.6E-10 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 CDG62_14115 3da393c05dc490d3a29c761bb4bf8426 54 Pfam PF00301 Rubredoxin 3 49 5.9E-24 T 23-10-2018 IPR024935 Rubredoxin domain GO:0005506 CDG62_15795 6d189feb4c8c4dd606c41dd92427f51f 229 Gene3D G3DSA:3.20.20.10 1 229 4.3E-78 T 23-10-2018 IPR029066 PLP-binding barrel CDG62_15795 6d189feb4c8c4dd606c41dd92427f51f 229 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 4 224 2.6E-72 T 23-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CDG62_15795 6d189feb4c8c4dd606c41dd92427f51f 229 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 23-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CDG62_15795 6d189feb4c8c4dd606c41dd92427f51f 229 PIRSF PIRSF004848 1 229 3.2E-71 T 23-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CDG62_15795 6d189feb4c8c4dd606c41dd92427f51f 229 SUPERFAMILY SSF51419 4 222 3.93E-74 T 23-10-2018 IPR029066 PLP-binding barrel CDG62_15795 6d189feb4c8c4dd606c41dd92427f51f 229 Pfam PF01168 Alanine racemase, N-terminal domain 13 224 1.2E-24 T 23-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CDG62_15795 6d189feb4c8c4dd606c41dd92427f51f 229 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 223 30.188 T 23-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 CDG62_09270 4283e7d55a39d803547c6ff449485b12 108 Gene3D G3DSA:2.102.10.10 1 108 2.9E-18 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG62_09270 4283e7d55a39d803547c6ff449485b12 108 SUPERFAMILY SSF50022 2 105 7.2E-23 T 23-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 CDG62_09270 4283e7d55a39d803547c6ff449485b12 108 Pfam PF00355 Rieske [2Fe-2S] domain 2 88 5.8E-14 T 23-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CDG62_07855 aa5670e6e8da55f1f43644ff3bd59877 447 Pfam PF00375 Sodium:dicarboxylate symporter family 10 416 6.2E-110 T 23-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CDG62_07855 aa5670e6e8da55f1f43644ff3bd59877 447 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 310 333 - T 23-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CDG62_07855 aa5670e6e8da55f1f43644ff3bd59877 447 SUPERFAMILY SSF118215 10 416 4.84E-119 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG62_07855 aa5670e6e8da55f1f43644ff3bd59877 447 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 3.3E-25 T 23-10-2018 CDG62_07855 aa5670e6e8da55f1f43644ff3bd59877 447 PRINTS PR00173 Glutamate-aspartate symporter signature 160 182 3.3E-25 T 23-10-2018 CDG62_07855 aa5670e6e8da55f1f43644ff3bd59877 447 PRINTS PR00173 Glutamate-aspartate symporter signature 342 361 3.3E-25 T 23-10-2018 CDG62_07855 aa5670e6e8da55f1f43644ff3bd59877 447 PRINTS PR00173 Glutamate-aspartate symporter signature 89 114 3.3E-25 T 23-10-2018 CDG62_07855 aa5670e6e8da55f1f43644ff3bd59877 447 PRINTS PR00173 Glutamate-aspartate symporter signature 307 333 3.3E-25 T 23-10-2018 CDG62_07855 aa5670e6e8da55f1f43644ff3bd59877 447 PRINTS PR00173 Glutamate-aspartate symporter signature 207 226 3.3E-25 T 23-10-2018 CDG62_07855 aa5670e6e8da55f1f43644ff3bd59877 447 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 3 443 36.907 T 23-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 CDG62_07855 aa5670e6e8da55f1f43644ff3bd59877 447 Gene3D G3DSA:1.10.3860.10 1 432 2.0E-121 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG62_09870 d1d8c6f03d9f14a7bd97e5073a094c5d 486 SMART SM00880 228 479 1.3E-50 T 23-10-2018 IPR007899 CHAD domain CDG62_09870 d1d8c6f03d9f14a7bd97e5073a094c5d 486 Gene3D G3DSA:1.40.20.10 207 486 1.8E-49 T 23-10-2018 IPR038186 CHAD domain superfamily CDG62_09870 d1d8c6f03d9f14a7bd97e5073a094c5d 486 SMART SM01118 1 202 5.9E-19 T 23-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CDG62_09870 d1d8c6f03d9f14a7bd97e5073a094c5d 486 Gene3D G3DSA:2.40.320.10 1 196 3.2E-28 T 23-10-2018 CDG62_09870 d1d8c6f03d9f14a7bd97e5073a094c5d 486 Pfam PF05235 CHAD domain 229 444 4.2E-41 T 23-10-2018 IPR007899 CHAD domain CDG62_09870 d1d8c6f03d9f14a7bd97e5073a094c5d 486 Pfam PF01928 CYTH domain 1 187 5.8E-18 T 23-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CDG62_09870 d1d8c6f03d9f14a7bd97e5073a094c5d 486 SUPERFAMILY SSF55154 1 210 7.68E-28 T 23-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 CDG62_04625 50509beb45d6c350bfbf4fb4910e31e6 639 Pfam PF01757 Acyltransferase family 4 312 3.3E-31 T 23-10-2018 IPR002656 Acyltransferase 3 GO:0016747 CDG62_04625 50509beb45d6c350bfbf4fb4910e31e6 639 SUPERFAMILY SSF52266 509 639 2.2E-5 T 23-10-2018 CDG62_07080 803c42304a229bce294af952256fcae5 589 SUPERFAMILY SSF56300 144 556 1.27E-32 T 23-10-2018 CDG62_07080 803c42304a229bce294af952256fcae5 589 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 48 137 2.6E-31 T 23-10-2018 IPR032093 Phospholipase D, N-terminal CDG62_07080 803c42304a229bce294af952256fcae5 589 Gene3D G3DSA:2.60.40.380 39 139 1.6E-31 T 23-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 CDG62_07080 803c42304a229bce294af952256fcae5 589 Pfam PF09423 PhoD-like phosphatase 147 552 2.4E-127 T 23-10-2018 IPR018946 Alkaline phosphatase D-related CDG62_11030 f14e26adc5b6161d220f521429100c7e 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 257 1.9E-69 T 23-10-2018 CDG62_11030 f14e26adc5b6161d220f521429100c7e 260 SUPERFAMILY SSF51735 9 259 1.31E-84 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_11030 f14e26adc5b6161d220f521429100c7e 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 23-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CDG62_11030 f14e26adc5b6161d220f521429100c7e 260 Gene3D G3DSA:3.40.50.720 1 259 2.0E-85 T 23-10-2018 CDG62_11030 f14e26adc5b6161d220f521429100c7e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.2E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11030 f14e26adc5b6161d220f521429100c7e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.2E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11030 f14e26adc5b6161d220f521429100c7e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.2E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11030 f14e26adc5b6161d220f521429100c7e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.2E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11030 f14e26adc5b6161d220f521429100c7e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.2E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11030 f14e26adc5b6161d220f521429100c7e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.2E-45 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11030 f14e26adc5b6161d220f521429100c7e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 3.2E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11030 f14e26adc5b6161d220f521429100c7e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 3.2E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11030 f14e26adc5b6161d220f521429100c7e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 3.2E-10 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_03670 d280afe98b0bf9bd4580f98965b89997 235 Pfam PF07729 FCD domain 83 205 3.8E-20 T 23-10-2018 IPR011711 GntR, C-terminal CDG62_03670 d280afe98b0bf9bd4580f98965b89997 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.8E-7 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_03670 d280afe98b0bf9bd4580f98965b89997 235 Gene3D G3DSA:1.20.120.530 80 220 1.9E-21 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG62_03670 d280afe98b0bf9bd4580f98965b89997 235 SUPERFAMILY SSF48008 81 213 2.07E-24 T 23-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CDG62_03670 d280afe98b0bf9bd4580f98965b89997 235 SUPERFAMILY SSF46785 5 93 2.73E-10 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_03670 d280afe98b0bf9bd4580f98965b89997 235 SMART SM00895 83 207 4.8E-15 T 23-10-2018 IPR011711 GntR, C-terminal CDG62_03670 d280afe98b0bf9bd4580f98965b89997 235 Gene3D G3DSA:1.10.10.10 6 73 2.2E-12 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_04885 7e0cae168f7e9fdf3bc92fc9e148683b 293 Pfam PF04294 VanW like protein 76 209 3.4E-35 T 23-10-2018 IPR007391 Vancomycin resistance VanW CDG62_18620 dcbbfc8c1a8805cc63c9af0e538818d6 213 SUPERFAMILY SSF52833 1 80 4.94E-21 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_18620 dcbbfc8c1a8805cc63c9af0e538818d6 213 Pfam PF14497 Glutathione S-transferase, C-terminal domain 140 206 1.2E-5 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal CDG62_18620 dcbbfc8c1a8805cc63c9af0e538818d6 213 SUPERFAMILY SSF47616 83 207 4.87E-19 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG62_18620 dcbbfc8c1a8805cc63c9af0e538818d6 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 73 3.0E-19 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG62_18620 dcbbfc8c1a8805cc63c9af0e538818d6 213 Gene3D G3DSA:1.20.1050.10 84 208 5.0E-23 T 23-10-2018 CDG62_18620 dcbbfc8c1a8805cc63c9af0e538818d6 213 Gene3D G3DSA:3.40.30.10 1 83 1.4E-34 T 23-10-2018 CDG62_01625 0c68b3de185ba4887aa3e94c1716290c 90 Pfam PF00462 Glutaredoxin 5 64 5.0E-22 T 23-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CDG62_01625 0c68b3de185ba4887aa3e94c1716290c 90 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 5 83 2.0E-30 T 23-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 CDG62_01625 0c68b3de185ba4887aa3e94c1716290c 90 Gene3D G3DSA:3.40.30.10 3 87 2.3E-28 T 23-10-2018 CDG62_01625 0c68b3de185ba4887aa3e94c1716290c 90 PRINTS PR00160 Glutaredoxin signature 5 23 2.8E-13 T 23-10-2018 IPR014025 Glutaredoxin subgroup CDG62_01625 0c68b3de185ba4887aa3e94c1716290c 90 PRINTS PR00160 Glutaredoxin signature 47 60 2.8E-13 T 23-10-2018 IPR014025 Glutaredoxin subgroup CDG62_01625 0c68b3de185ba4887aa3e94c1716290c 90 PRINTS PR00160 Glutaredoxin signature 61 74 2.8E-13 T 23-10-2018 IPR014025 Glutaredoxin subgroup CDG62_01625 0c68b3de185ba4887aa3e94c1716290c 90 ProSitePatterns PS00195 Glutaredoxin active site. 7 23 - T 23-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CDG62_01625 0c68b3de185ba4887aa3e94c1716290c 90 SUPERFAMILY SSF52833 4 84 1.39E-28 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_18755 c33c0a8c1d4a8d217265cff096fba04a 304 PIRSF PIRSF028561 1 304 1.2E-73 T 23-10-2018 IPR014548 Predicted acyltransferase CDG62_18755 c33c0a8c1d4a8d217265cff096fba04a 304 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 106 302 6.1E-14 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDG62_08655 7c13196c8eb8c59edddab6ada6ccc66f 259 Gene3D G3DSA:3.10.620.30 63 250 2.9E-41 T 23-10-2018 CDG62_08655 7c13196c8eb8c59edddab6ada6ccc66f 259 Pfam PF01841 Transglutaminase-like superfamily 126 212 7.0E-21 T 23-10-2018 IPR002931 Transglutaminase-like CDG62_08655 7c13196c8eb8c59edddab6ada6ccc66f 259 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 4.6E-13 T 23-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal CDG62_08655 7c13196c8eb8c59edddab6ada6ccc66f 259 SMART SM00460 153 215 2.6E-16 T 23-10-2018 IPR002931 Transglutaminase-like CDG62_08655 7c13196c8eb8c59edddab6ada6ccc66f 259 SUPERFAMILY SSF54001 97 240 9.81E-39 T 23-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CDG62_16920 e2ba3cc6495b3e675905316fd252cf56 260 Pfam PF05742 Transport and Golgi organisation 2 1 234 2.0E-55 T 23-10-2018 IPR008551 Transport and Golgi organisation protein 2 CDG62_11330 ccbf9356fde50462edeffe7769e95bc3 370 Hamap MF_01699 Pyrimidine monooxygenase RutA [rutA]. 1 360 67.948 T 23-10-2018 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 CDG62_11330 ccbf9356fde50462edeffe7769e95bc3 370 SUPERFAMILY SSF51679 1 352 1.44E-78 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG62_11330 ccbf9356fde50462edeffe7769e95bc3 370 Gene3D G3DSA:3.20.20.30 1 357 3.3E-80 T 23-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 CDG62_11330 ccbf9356fde50462edeffe7769e95bc3 370 TIGRFAM TIGR03612 RutA: pyrimidine utilization protein A 1 355 3.3E-215 T 23-10-2018 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 CDG62_11330 ccbf9356fde50462edeffe7769e95bc3 370 Pfam PF00296 Luciferase-like monooxygenase 1 319 1.1E-72 T 23-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CDG62_11530 16eb883639b09921c5069e85747f2ea7 59 TIGRFAM TIGR04111 BcepMu_gp16: phage-associated protein, BcepMu gp16 family 5 58 2.5E-25 T 23-10-2018 IPR026365 Phage-associated protein, BcepMu gp16 family CDG62_18270 8487518c0c59e5b422e2c940fd5d5794 247 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 5 247 1.6E-35 T 23-10-2018 IPR010239 Conserved hypothetical protein CHP02001 CDG62_18270 8487518c0c59e5b422e2c940fd5d5794 247 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 23 226 2.1E-26 T 23-10-2018 IPR010239 Conserved hypothetical protein CHP02001 CDG62_17170 2a8199a2c332de7a5fb058821725a54f 78 Pfam PF09834 Predicted membrane protein (DUF2061) 17 66 2.2E-18 T 23-10-2018 IPR018638 Domain of unknown function DUF2061, membrane CDG62_16520 2870bcf6c34cf8d148a8cd63f36c585a 134 Pfam PF02410 Ribosomal silencing factor during starvation 31 125 2.5E-26 T 23-10-2018 CDG62_16520 2870bcf6c34cf8d148a8cd63f36c585a 134 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 29 125 1.6E-35 T 23-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CDG62_16520 2870bcf6c34cf8d148a8cd63f36c585a 134 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 24 126 24.625 T 23-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CDG62_16520 2870bcf6c34cf8d148a8cd63f36c585a 134 Gene3D G3DSA:3.30.460.10 22 134 5.1E-37 T 23-10-2018 CDG62_16520 2870bcf6c34cf8d148a8cd63f36c585a 134 SUPERFAMILY SSF81301 24 130 3.11E-36 T 23-10-2018 CDG62_01055 91ba7efa5fbd4fd32b81f25ab3bc4a59 220 Pfam PF12762 ISXO2-like transposase domain 63 204 6.7E-30 T 23-10-2018 IPR024445 ISXO2-like transposase domain CDG62_01055 91ba7efa5fbd4fd32b81f25ab3bc4a59 220 SMART SM01126 60 205 9.4E-46 T 23-10-2018 IPR024445 ISXO2-like transposase domain CDG62_07895 7963547a65cc0629723c7036b6249b57 209 Gene3D G3DSA:3.40.50.1820 1 208 5.8E-39 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_07895 7963547a65cc0629723c7036b6249b57 209 SUPERFAMILY SSF53474 3 207 8.76E-32 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_10870 a3d958e4b79bf93fd002a3f821d360a8 363 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 36.43 T 23-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG62_10870 a3d958e4b79bf93fd002a3f821d360a8 363 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 23-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG62_10870 a3d958e4b79bf93fd002a3f821d360a8 363 Pfam PF01264 Chorismate synthase 10 345 4.2E-136 T 23-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG62_10870 a3d958e4b79bf93fd002a3f821d360a8 363 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 23-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG62_10870 a3d958e4b79bf93fd002a3f821d360a8 363 Gene3D G3DSA:3.60.150.10 1 363 1.5E-160 T 23-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG62_10870 a3d958e4b79bf93fd002a3f821d360a8 363 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 9.6E-135 T 23-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG62_10870 a3d958e4b79bf93fd002a3f821d360a8 363 SUPERFAMILY SSF103263 4 352 9.16E-143 T 23-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG62_10870 a3d958e4b79bf93fd002a3f821d360a8 363 PIRSF PIRSF001456 3 358 1.7E-135 T 23-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG62_10870 a3d958e4b79bf93fd002a3f821d360a8 363 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 23-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CDG62_09370 c8eacf3d19c0c5a88628c27aa254ed0a 294 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 5 292 47.103 T 23-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 CDG62_09370 c8eacf3d19c0c5a88628c27aa254ed0a 294 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 254 1.7E-48 T 23-10-2018 CDG62_09370 c8eacf3d19c0c5a88628c27aa254ed0a 294 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 8 291 1.8E-123 T 23-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 CDG62_09370 c8eacf3d19c0c5a88628c27aa254ed0a 294 Gene3D G3DSA:3.20.20.60 4 294 1.5E-98 T 23-10-2018 CDG62_09370 c8eacf3d19c0c5a88628c27aa254ed0a 294 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 23-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 CDG62_09370 c8eacf3d19c0c5a88628c27aa254ed0a 294 SUPERFAMILY SSF51621 6 290 6.73E-99 T 23-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 CDG62_15130 02b8c8a80b530894c26930f432fd83e1 144 Gene3D G3DSA:1.20.1290.10 4 124 6.0E-41 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDG62_15130 02b8c8a80b530894c26930f432fd83e1 144 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 124 2.5E-50 T 23-10-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 CDG62_15130 02b8c8a80b530894c26930f432fd83e1 144 SUPERFAMILY SSF69118 3 129 3.27E-37 T 23-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CDG62_15130 02b8c8a80b530894c26930f432fd83e1 144 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 119 2.0E-23 T 23-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CDG62_07195 93bd0860cab8f79608a43ee5ec2feb7e 301 Pfam PF00892 EamA-like transporter family 12 144 1.7E-10 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_07195 93bd0860cab8f79608a43ee5ec2feb7e 301 Pfam PF00892 EamA-like transporter family 165 297 1.4E-15 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_07195 93bd0860cab8f79608a43ee5ec2feb7e 301 SUPERFAMILY SSF103481 201 298 6.41E-12 T 23-10-2018 CDG62_07195 93bd0860cab8f79608a43ee5ec2feb7e 301 SUPERFAMILY SSF103481 63 149 2.09E-6 T 23-10-2018 CDG62_08855 1c1b31f5bb5310401bf77faa2960db7f 439 SUPERFAMILY SSF103473 1 434 7.59E-33 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_08855 1c1b31f5bb5310401bf77faa2960db7f 439 Gene3D G3DSA:1.20.1250.20 8 424 9.2E-29 T 23-10-2018 CDG62_08855 1c1b31f5bb5310401bf77faa2960db7f 439 Pfam PF07690 Major Facilitator Superfamily 17 313 5.9E-16 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_16970 fbfd3710ba893c18d922a96c1bf28139 134 Gene3D G3DSA:3.30.420.270 61 130 3.6E-12 T 23-10-2018 CDG62_16970 fbfd3710ba893c18d922a96c1bf28139 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 132 7.9E-28 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CDG62_15235 13d50410c07936e386da885d2409ab37 482 SUPERFAMILY SSF53720 21 479 2.23E-160 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG62_15235 13d50410c07936e386da885d2409ab37 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDG62_15235 13d50410c07936e386da885d2409ab37 482 Gene3D G3DSA:3.40.309.10 259 448 3.7E-174 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG62_15235 13d50410c07936e386da885d2409ab37 482 Gene3D G3DSA:3.40.605.10 22 471 3.7E-174 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG62_15235 13d50410c07936e386da885d2409ab37 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDG62_15235 13d50410c07936e386da885d2409ab37 482 Pfam PF00171 Aldehyde dehydrogenase family 23 475 5.7E-161 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG62_15235 13d50410c07936e386da885d2409ab37 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 28 474 1.9E-205 T 23-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CDG62_11930 32dd0dc72ab231d3878d27eb67764480 115 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 107 7.3E-9 T 23-10-2018 IPR008407 Branched-chain amino acid transport, AzlD CDG62_12820 1c9d03135f470da383e6c0abaf7a2a82 217 PIRSF PIRSF020736 1 215 1.6E-87 T 23-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CDG62_12820 1c9d03135f470da383e6c0abaf7a2a82 217 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 62 210 3.1E-49 T 23-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CDG62_12820 1c9d03135f470da383e6c0abaf7a2a82 217 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 9 59 4.4E-16 T 23-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CDG62_12820 1c9d03135f470da383e6c0abaf7a2a82 217 Gene3D G3DSA:1.20.1260.10 6 217 2.1E-72 T 23-10-2018 IPR012347 Ferritin-like CDG62_12820 1c9d03135f470da383e6c0abaf7a2a82 217 SUPERFAMILY SSF47240 10 213 6.86E-71 T 23-10-2018 IPR009078 Ferritin-like superfamily CDG62_12250 13080cfac404a64946019b30e190ccd6 538 Pfam PF02321 Outer membrane efflux protein 344 518 1.3E-18 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_12250 13080cfac404a64946019b30e190ccd6 538 Pfam PF02321 Outer membrane efflux protein 135 313 9.4E-25 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_12250 13080cfac404a64946019b30e190ccd6 538 SUPERFAMILY SSF56954 45 519 2.35E-63 T 23-10-2018 CDG62_12250 13080cfac404a64946019b30e190ccd6 538 Gene3D G3DSA:1.20.1600.10 133 532 2.9E-61 T 23-10-2018 CDG62_09745 1e99f6d54ec986d0bae7387fb43e5bc1 347 Pfam PF13271 Domain of unknown function (DUF4062) 6 87 1.6E-28 T 23-10-2018 IPR025139 Domain of unknown function DUF4062 CDG62_08185 3d4240e5b53e15820e3b89b193c5e936 103 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 84 8.4E-15 T 23-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CDG62_08185 3d4240e5b53e15820e3b89b193c5e936 103 SUPERFAMILY SSF54909 1 98 2.77E-18 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_08185 3d4240e5b53e15820e3b89b193c5e936 103 Gene3D G3DSA:3.30.70.100 1 103 1.9E-23 T 23-10-2018 CDG62_05095 a6935dd61c0dd09c878ce0f913bd9311 298 SUPERFAMILY SSF53474 4 296 4.23E-47 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_05095 a6935dd61c0dd09c878ce0f913bd9311 298 Gene3D G3DSA:3.40.50.1820 15 276 5.7E-43 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_05095 a6935dd61c0dd09c878ce0f913bd9311 298 Pfam PF12146 Serine aminopeptidase, S33 31 259 5.1E-15 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG62_05095 a6935dd61c0dd09c878ce0f913bd9311 298 Gene3D G3DSA:1.10.10.800 141 223 5.7E-43 T 23-10-2018 CDG62_18960 307ab17d1b4369daaf5c878b187bbe21 190 Gene3D G3DSA:3.40.80.10 8 189 9.3E-56 T 23-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDG62_18960 307ab17d1b4369daaf5c878b187bbe21 190 SUPERFAMILY SSF55846 11 186 1.07E-62 T 23-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDG62_18960 307ab17d1b4369daaf5c878b187bbe21 190 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 32 172 2.7E-27 T 23-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDG62_18960 307ab17d1b4369daaf5c878b187bbe21 190 SMART SM00644 22 172 6.2E-43 T 23-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CDG62_07935 244b7d225fb11e87a390c8f558602cb5 184 Pfam PF01292 Prokaryotic cytochrome b561 7 180 8.1E-27 T 23-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CDG62_07935 244b7d225fb11e87a390c8f558602cb5 184 SUPERFAMILY SSF81342 6 180 5.41E-33 T 23-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CDG62_15295 896b386b91b0a19af21186420e8935a8 139 Pfam PF03788 LrgA family 30 117 2.1E-24 T 23-10-2018 IPR005538 LrgA/CidA family GO:0016021 CDG62_05525 c92c6c2cce0d3337ad53da2ad935af2e 148 Pfam PF11776 Nickel/cobalt transporter regulator 116 145 1.4E-6 T 23-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CDG62_05525 c92c6c2cce0d3337ad53da2ad935af2e 148 Gene3D G3DSA:3.10.450.160 88 147 3.5E-6 T 23-10-2018 CDG62_11855 c2eee0d8f3f1d3e517d288be3b47bc0f 156 SMART SM00344 3 112 1.4E-26 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG62_11855 c2eee0d8f3f1d3e517d288be3b47bc0f 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 44 9.4E-10 T 23-10-2018 CDG62_11855 c2eee0d8f3f1d3e517d288be3b47bc0f 156 Gene3D G3DSA:3.30.70.920 56 140 6.6E-21 T 23-10-2018 CDG62_11855 c2eee0d8f3f1d3e517d288be3b47bc0f 156 Gene3D G3DSA:1.10.10.10 1 55 7.0E-10 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_11855 c2eee0d8f3f1d3e517d288be3b47bc0f 156 SUPERFAMILY SSF54909 65 144 4.83E-15 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_11855 c2eee0d8f3f1d3e517d288be3b47bc0f 156 SUPERFAMILY SSF46785 2 88 1.07E-9 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_11855 c2eee0d8f3f1d3e517d288be3b47bc0f 156 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 6.4E-18 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG62_03015 c77f81255050ff20fe2fa5c89dc22224 187 Pfam PF14066 Protein of unknown function (DUF4256) 16 186 1.8E-75 T 23-10-2018 IPR025352 Protein of unknown function DUF4256 CDG62_00200 a7c51a0a8978455d7321b9ea40b42d3b 218 Gene3D G3DSA:1.10.260.40 2 85 1.0E-7 T 23-10-2018 CDG62_00200 a7c51a0a8978455d7321b9ea40b42d3b 218 SUPERFAMILY SSF47413 12 86 4.74E-6 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG62_12090 9dc1b77c7777a09cb1d36eef441626d8 401 Pfam PF07759 Protein of unknown function (DUF1615) 51 395 1.8E-117 T 23-10-2018 IPR011673 Protein of unknown function DUF1615 CDG62_12090 9dc1b77c7777a09cb1d36eef441626d8 401 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 21 395 6.0E-149 T 23-10-2018 IPR011673 Protein of unknown function DUF1615 CDG62_08315 0ece35b5cbb91a98ab7d671fdcc77738 290 Gene3D G3DSA:3.40.50.300 48 191 1.9E-11 T 23-10-2018 CDG62_08315 0ece35b5cbb91a98ab7d671fdcc77738 290 SUPERFAMILY SSF52540 41 191 3.21E-25 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_08315 0ece35b5cbb91a98ab7d671fdcc77738 290 Pfam PF05673 Protein of unknown function (DUF815) 36 284 5.0E-105 T 23-10-2018 IPR008533 Domain of unknown function DUF815 CDG62_16180 20fe394e4869e113f96c488289eefa1d 419 SUPERFAMILY SSF55205 1 418 1.05E-141 T 23-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CDG62_16180 20fe394e4869e113f96c488289eefa1d 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 7.7E-174 T 23-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_16180 20fe394e4869e113f96c488289eefa1d 419 Gene3D G3DSA:3.65.10.10 6 414 2.6E-172 T 23-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CDG62_16180 20fe394e4869e113f96c488289eefa1d 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.834 T 23-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 CDG62_16180 20fe394e4869e113f96c488289eefa1d 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 1.4E-107 T 23-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CDG62_16180 20fe394e4869e113f96c488289eefa1d 419 Gene3D G3DSA:3.65.10.10 21 229 2.6E-172 T 23-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 CDG62_10780 9e3d68ead6a4208c3c591931dd20d19b 530 SUPERFAMILY SSF63411 62 270 5.41E-34 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG62_10780 9e3d68ead6a4208c3c591931dd20d19b 530 Gene3D G3DSA:3.30.830.10 286 484 2.3E-47 T 23-10-2018 CDG62_10780 9e3d68ead6a4208c3c591931dd20d19b 530 Pfam PF05193 Peptidase M16 inactive domain 231 406 1.3E-21 T 23-10-2018 IPR007863 Peptidase M16, C-terminal CDG62_10780 9e3d68ead6a4208c3c591931dd20d19b 530 Pfam PF00675 Insulinase (Peptidase family M16) 78 225 6.8E-9 T 23-10-2018 IPR011765 Peptidase M16, N-terminal CDG62_10780 9e3d68ead6a4208c3c591931dd20d19b 530 SUPERFAMILY SSF63411 295 480 1.63E-37 T 23-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CDG62_10780 9e3d68ead6a4208c3c591931dd20d19b 530 Gene3D G3DSA:3.30.830.10 65 279 1.2E-37 T 23-10-2018 CDG62_15045 825e4e69e6c7930cc2611ff73b041280 333 SMART SM00342 250 332 6.7E-5 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_15045 825e4e69e6c7930cc2611ff73b041280 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 33 205 4.4E-13 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG62_15045 825e4e69e6c7930cc2611ff73b041280 333 Gene3D G3DSA:1.10.10.60 228 333 1.2E-13 T 23-10-2018 CDG62_06140 8f7bbe6e6c47ea39ccc8a88a134dffac 111 SUPERFAMILY SSF160113 60 109 5.63E-17 T 23-10-2018 IPR036913 YegP-like superfamily CDG62_06140 8f7bbe6e6c47ea39ccc8a88a134dffac 111 Pfam PF07411 Domain of unknown function (DUF1508) 61 108 3.7E-21 T 23-10-2018 IPR010879 Domain of unknown function DUF1508 CDG62_06140 8f7bbe6e6c47ea39ccc8a88a134dffac 111 Pfam PF07411 Domain of unknown function (DUF1508) 10 57 1.1E-23 T 23-10-2018 IPR010879 Domain of unknown function DUF1508 CDG62_06140 8f7bbe6e6c47ea39ccc8a88a134dffac 111 Gene3D G3DSA:2.30.29.80 1 111 3.9E-50 T 23-10-2018 CDG62_06140 8f7bbe6e6c47ea39ccc8a88a134dffac 111 SUPERFAMILY SSF160113 1 57 1.06E-19 T 23-10-2018 IPR036913 YegP-like superfamily CDG62_09985 7f15182961bd0462815c18342de7b62f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.8E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_09985 7f15182961bd0462815c18342de7b62f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 1.8E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_09985 7f15182961bd0462815c18342de7b62f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.8E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_09985 7f15182961bd0462815c18342de7b62f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 1.8E-14 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_09985 7f15182961bd0462815c18342de7b62f 255 Pfam PF00106 short chain dehydrogenase 18 208 7.9E-37 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_09985 7f15182961bd0462815c18342de7b62f 255 SUPERFAMILY SSF51735 18 244 1.69E-46 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_09985 7f15182961bd0462815c18342de7b62f 255 Gene3D G3DSA:3.40.50.720 12 255 1.0E-53 T 23-10-2018 CDG62_07950 0ecbdd29ca82fd1a6005d716d441e70a 195 Gene3D G3DSA:3.30.420.10 1 195 8.0E-78 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_07950 0ecbdd29ca82fd1a6005d716d441e70a 195 SUPERFAMILY SSF53098 2 188 3.19E-69 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_07950 0ecbdd29ca82fd1a6005d716d441e70a 195 Pfam PF01351 Ribonuclease HII 4 179 2.0E-43 T 23-10-2018 IPR024567 Ribonuclease HII/HIII domain CDG62_07950 0ecbdd29ca82fd1a6005d716d441e70a 195 Hamap MF_00052_B Ribonuclease HII [rnhB]. 2 182 37.623 T 23-10-2018 IPR022898 Ribonuclease HII GO:0004523 CDG62_08225 c5c92befa9242da2d13bd109fb06b86e 383 SUPERFAMILY SSF52540 78 365 5.53E-73 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_08225 c5c92befa9242da2d13bd109fb06b86e 383 SMART SM00487 22 229 6.4E-57 T 23-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CDG62_08225 c5c92befa9242da2d13bd109fb06b86e 383 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 2 382 49.178 T 23-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 CDG62_08225 c5c92befa9242da2d13bd109fb06b86e 383 Gene3D G3DSA:3.40.50.300 220 377 5.1E-50 T 23-10-2018 CDG62_08225 c5c92befa9242da2d13bd109fb06b86e 383 Pfam PF00270 DEAD/DEAH box helicase 27 200 6.3E-48 T 23-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CDG62_08225 c5c92befa9242da2d13bd109fb06b86e 383 SMART SM00490 265 346 1.7E-28 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_08225 c5c92befa9242da2d13bd109fb06b86e 383 Pfam PF00271 Helicase conserved C-terminal domain 237 346 3.3E-29 T 23-10-2018 IPR001650 Helicase, C-terminal CDG62_08225 c5c92befa9242da2d13bd109fb06b86e 383 Gene3D G3DSA:3.40.50.300 1 217 2.7E-74 T 23-10-2018 CDG62_08225 c5c92befa9242da2d13bd109fb06b86e 383 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 23-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CDG62_10060 931170824b4ead215910a57a5d2608f9 146 Pfam PF00583 Acetyltransferase (GNAT) family 36 133 3.0E-14 T 23-10-2018 IPR000182 GNAT domain CDG62_10060 931170824b4ead215910a57a5d2608f9 146 SUPERFAMILY SSF55729 1 143 2.66E-31 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_10060 931170824b4ead215910a57a5d2608f9 146 Gene3D G3DSA:3.40.630.30 2 139 1.1E-32 T 23-10-2018 CDG62_07635 d87f3155a30df0f7c055990715c056f1 274 Pfam PF12833 Helix-turn-helix domain 183 255 5.2E-15 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_07635 d87f3155a30df0f7c055990715c056f1 274 Gene3D G3DSA:1.10.10.60 158 259 5.4E-20 T 23-10-2018 CDG62_07635 d87f3155a30df0f7c055990715c056f1 274 SUPERFAMILY SSF46689 213 260 1.57E-5 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_07635 d87f3155a30df0f7c055990715c056f1 274 SMART SM00342 176 258 1.8E-15 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_08550 6b262359346dd7df3744abce80b8ebb7 269 Gene3D G3DSA:2.160.10.10 67 190 7.6E-39 T 23-10-2018 CDG62_08550 6b262359346dd7df3744abce80b8ebb7 269 Gene3D G3DSA:1.10.3130.10 1 66 5.4E-24 T 23-10-2018 CDG62_08550 6b262359346dd7df3744abce80b8ebb7 269 Pfam PF06426 Serine acetyltransferase, N-terminal 3 35 2.7E-4 T 23-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CDG62_08550 6b262359346dd7df3744abce80b8ebb7 269 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 3.3E-76 T 23-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 CDG62_08550 6b262359346dd7df3744abce80b8ebb7 269 SUPERFAMILY SSF51161 4 175 1.03E-57 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG62_08550 6b262359346dd7df3744abce80b8ebb7 269 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 6.8E-5 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_08550 6b262359346dd7df3744abce80b8ebb7 269 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 7.4E-7 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_07790 12197f59401302f1d64cc7a600ff6c7e 233 Pfam PF03400 IS1 transposase 102 220 1.4E-26 T 23-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 CDG62_01345 12197f59401302f1d64cc7a600ff6c7e 233 Pfam PF03400 IS1 transposase 102 220 1.4E-26 T 23-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 CDG62_05000 2d4b8fd0cf97b5970a9fbe60b4f6bc48 655 Gene3D G3DSA:1.10.530.10 484 650 3.4E-41 T 23-10-2018 CDG62_05000 2d4b8fd0cf97b5970a9fbe60b4f6bc48 655 SUPERFAMILY SSF48435 35 486 2.22E-85 T 23-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 CDG62_05000 2d4b8fd0cf97b5970a9fbe60b4f6bc48 655 Pfam PF01464 Transglycosylase SLT domain 498 601 3.8E-21 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 CDG62_05000 2d4b8fd0cf97b5970a9fbe60b4f6bc48 655 SUPERFAMILY SSF53955 488 647 2.64E-43 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG62_05000 2d4b8fd0cf97b5970a9fbe60b4f6bc48 655 Gene3D G3DSA:1.25.20.10 33 393 1.2E-55 T 23-10-2018 CDG62_04475 55c8d1aa10ebe691099cdee810d07b74 432 SUPERFAMILY SSF56112 93 303 9.2E-21 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_04475 55c8d1aa10ebe691099cdee810d07b74 432 Pfam PF03109 ABC1 family 110 228 6.2E-32 T 23-10-2018 IPR004147 UbiB domain CDG62_19135 f43e445061ce3cc39e16bd360079230e 375 SUPERFAMILY SSF53067 4 347 6.73E-23 T 23-10-2018 CDG62_19135 f43e445061ce3cc39e16bd360079230e 375 Gene3D G3DSA:3.30.420.40 140 335 3.4E-124 T 23-10-2018 CDG62_19135 f43e445061ce3cc39e16bd360079230e 375 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 3 375 39.686 T 23-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 CDG62_19135 f43e445061ce3cc39e16bd360079230e 375 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 4 373 4.3E-132 T 23-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 CDG62_19135 f43e445061ce3cc39e16bd360079230e 375 Gene3D G3DSA:3.30.420.40 11 370 3.4E-124 T 23-10-2018 CDG62_11240 f2d7bf9dbf053ec27ba012e40b819b26 258 Pfam PF12146 Serine aminopeptidase, S33 43 230 2.2E-16 T 23-10-2018 IPR022742 Serine aminopeptidase, S33 CDG62_11240 f2d7bf9dbf053ec27ba012e40b819b26 258 SUPERFAMILY SSF53474 2 257 5.86E-67 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_11240 f2d7bf9dbf053ec27ba012e40b819b26 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 4.1E-7 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_11240 f2d7bf9dbf053ec27ba012e40b819b26 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 4.1E-7 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_11240 f2d7bf9dbf053ec27ba012e40b819b26 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 4.1E-7 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_11240 f2d7bf9dbf053ec27ba012e40b819b26 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 4.1E-7 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_11240 f2d7bf9dbf053ec27ba012e40b819b26 258 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 11 257 3.7E-89 T 23-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 CDG62_11240 f2d7bf9dbf053ec27ba012e40b819b26 258 Gene3D G3DSA:3.40.50.1820 2 258 1.0E-68 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_03205 e84320935be0c4fdbc20418770d6abe3 150 Pfam PF03692 Putative zinc- or iron-chelating domain 27 95 1.3E-7 T 23-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CDG62_03205 e84320935be0c4fdbc20418770d6abe3 150 PIRSF PIRSF006173 1 150 6.8E-66 T 23-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 CDG62_03205 e84320935be0c4fdbc20418770d6abe3 150 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 5 150 37.478 T 23-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 CDG62_04745 0e76470ec86ed194bb361931fb802e83 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 9.5E-54 T 23-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CDG62_04745 0e76470ec86ed194bb361931fb802e83 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.882 T 23-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CDG62_04745 0e76470ec86ed194bb361931fb802e83 122 SUPERFAMILY SSF50193 1 122 9.42E-51 T 23-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 CDG62_04745 0e76470ec86ed194bb361931fb802e83 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04745 0e76470ec86ed194bb361931fb802e83 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 4.9E-57 T 23-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CDG62_04745 0e76470ec86ed194bb361931fb802e83 122 SMART SM01374 1 122 1.5E-84 T 23-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CDG62_04745 0e76470ec86ed194bb361931fb802e83 122 Gene3D G3DSA:2.40.150.20 1 122 8.2E-54 T 23-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 CDG62_14720 71ffa78c5b86cb8595f67abe97aad331 226 SMART SM00448 2 113 1.3E-38 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_14720 71ffa78c5b86cb8595f67abe97aad331 226 Gene3D G3DSA:1.10.10.10 130 225 8.0E-24 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_14720 71ffa78c5b86cb8595f67abe97aad331 226 SUPERFAMILY SSF52172 2 175 9.11E-40 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_14720 71ffa78c5b86cb8595f67abe97aad331 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 3.5E-19 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_14720 71ffa78c5b86cb8595f67abe97aad331 226 Pfam PF00072 Response regulator receiver domain 4 113 2.9E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_14720 71ffa78c5b86cb8595f67abe97aad331 226 SMART SM00862 150 221 4.9E-20 T 23-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CDG62_14720 71ffa78c5b86cb8595f67abe97aad331 226 Gene3D G3DSA:3.40.50.2300 1 129 4.5E-37 T 23-10-2018 CDG62_03490 66ae68e17220d9c20d255b09c47d9eae 216 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 216 33.019 T 23-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_03490 66ae68e17220d9c20d255b09c47d9eae 216 Gene3D G3DSA:3.40.50.2020 7 216 2.9E-75 T 23-10-2018 CDG62_03490 66ae68e17220d9c20d255b09c47d9eae 216 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 14 191 2.8E-57 T 23-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CDG62_03490 66ae68e17220d9c20d255b09c47d9eae 216 SUPERFAMILY SSF53271 11 199 3.8E-47 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG62_03490 66ae68e17220d9c20d255b09c47d9eae 216 Pfam PF00156 Phosphoribosyl transferase domain 45 163 6.9E-16 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDG62_07865 d0ec61a70fe6e5129352571fd3121b38 172 Gene3D G3DSA:3.40.50.880 1 171 6.5E-34 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_07865 d0ec61a70fe6e5129352571fd3121b38 172 SUPERFAMILY SSF52317 1 166 2.22E-32 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_07865 d0ec61a70fe6e5129352571fd3121b38 172 Pfam PF01965 DJ-1/PfpI family 3 166 6.8E-35 T 23-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CDG62_10850 22850357be268b0850ebfe612969d54e 457 Pfam PF03109 ABC1 family 128 232 1.1E-25 T 23-10-2018 IPR004147 UbiB domain CDG62_10850 22850357be268b0850ebfe612969d54e 457 SUPERFAMILY SSF56112 107 317 1.21E-9 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_11225 b31c4ab4aeabcd5cf7df1b7dca22b732 226 Gene3D G3DSA:3.40.1080.10 1 224 1.6E-79 T 23-10-2018 CDG62_11225 b31c4ab4aeabcd5cf7df1b7dca22b732 226 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 4.6E-121 T 23-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CDG62_11225 b31c4ab4aeabcd5cf7df1b7dca22b732 226 Pfam PF01144 Coenzyme A transferase 8 218 1.9E-72 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_11225 b31c4ab4aeabcd5cf7df1b7dca22b732 226 SUPERFAMILY SSF100950 2 222 8.9E-79 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG62_11225 b31c4ab4aeabcd5cf7df1b7dca22b732 226 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 23-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 CDG62_11225 b31c4ab4aeabcd5cf7df1b7dca22b732 226 SMART SM00882 6 219 1.4E-80 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_03970 8add90d4300f4e6932a559b37da7d75b 209 SUPERFAMILY SSF50249 8 70 1.3E-10 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_03970 8add90d4300f4e6932a559b37da7d75b 209 Gene3D G3DSA:2.40.50.140 2 78 2.1E-12 T 23-10-2018 CDG62_03970 8add90d4300f4e6932a559b37da7d75b 209 Pfam PF06961 Protein of unknown function (DUF1294) 128 182 1.6E-21 T 23-10-2018 IPR010718 Protein of unknown function DUF1294 CDG62_03970 8add90d4300f4e6932a559b37da7d75b 209 Pfam PF00313 'Cold-shock' DNA-binding domain 8 66 9.7E-9 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG62_09410 87574c3700c30f96327ce9b4d85e6841 364 Pfam PF08331 Domain of unknown function (DUF1730) 72 150 1.6E-22 T 23-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 CDG62_09410 87574c3700c30f96327ce9b4d85e6841 364 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 17 325 44.903 T 23-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CDG62_09410 87574c3700c30f96327ce9b4d85e6841 364 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 24 358 1.1E-136 T 23-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CDG62_09410 87574c3700c30f96327ce9b4d85e6841 364 Pfam PF13484 4Fe-4S double cluster binding domain 202 266 9.5E-19 T 23-10-2018 CDG62_09410 87574c3700c30f96327ce9b4d85e6841 364 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 203 214 - T 23-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDG62_09410 87574c3700c30f96327ce9b4d85e6841 364 SUPERFAMILY SSF46548 149 266 1.67E-16 T 23-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CDG62_10050 626c13ee273d97b601f8a0b2a4fcaf7e 152 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 16 113 2.0E-32 T 23-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CDG62_10050 626c13ee273d97b601f8a0b2a4fcaf7e 152 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 5 150 18.867 T 23-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CDG62_10050 626c13ee273d97b601f8a0b2a4fcaf7e 152 Pfam PF04284 Protein of unknown function (DUF441) 9 147 2.4E-47 T 23-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CDG62_15975 b8ad5b8621c900914b4510c054362154 150 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 7 148 2.5E-41 T 23-10-2018 IPR005265 Uncharacterised protein family UPF0093 CDG62_15975 b8ad5b8621c900914b4510c054362154 150 PIRSF PIRSF004638 1 150 1.6E-49 T 23-10-2018 IPR005265 Uncharacterised protein family UPF0093 CDG62_15975 b8ad5b8621c900914b4510c054362154 150 Pfam PF03653 Uncharacterised protein family (UPF0093) 6 148 1.9E-48 T 23-10-2018 IPR005265 Uncharacterised protein family UPF0093 CDG62_12255 ab271f483e2c8e307805d818fd78c3b4 361 Gene3D G3DSA:3.90.550.10 9 164 5.4E-13 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_12255 ab271f483e2c8e307805d818fd78c3b4 361 Gene3D G3DSA:1.25.40.10 165 347 2.3E-8 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_12255 ab271f483e2c8e307805d818fd78c3b4 361 SUPERFAMILY SSF81901 180 302 1.39E-5 T 23-10-2018 CDG62_12255 ab271f483e2c8e307805d818fd78c3b4 361 Pfam PF00535 Glycosyl transferase family 2 9 98 1.0E-10 T 23-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDG62_12255 ab271f483e2c8e307805d818fd78c3b4 361 SUPERFAMILY SSF53448 7 128 2.53E-18 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_12155 bca0c02998d60bcd6dd28c937af75239 338 Gene3D G3DSA:1.10.287.470 108 174 7.4E-9 T 23-10-2018 CDG62_12155 bca0c02998d60bcd6dd28c937af75239 338 Pfam PF13533 Biotin-lipoyl like 44 92 9.8E-12 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDG62_12155 bca0c02998d60bcd6dd28c937af75239 338 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 55 75 1.6E-5 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG62_12155 bca0c02998d60bcd6dd28c937af75239 338 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 313 337 1.6E-5 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG62_12155 bca0c02998d60bcd6dd28c937af75239 338 Gene3D G3DSA:2.40.50.100 210 244 2.2E-21 T 23-10-2018 CDG62_12155 bca0c02998d60bcd6dd28c937af75239 338 Gene3D G3DSA:2.40.30.170 245 331 2.2E-21 T 23-10-2018 CDG62_12155 bca0c02998d60bcd6dd28c937af75239 338 Gene3D G3DSA:2.40.50.100 44 77 2.0E-11 T 23-10-2018 CDG62_12155 bca0c02998d60bcd6dd28c937af75239 338 SUPERFAMILY SSF111369 178 329 1.7E-10 T 23-10-2018 CDG62_12155 bca0c02998d60bcd6dd28c937af75239 338 Gene3D G3DSA:2.40.30.170 33 43 2.0E-11 T 23-10-2018 CDG62_12155 bca0c02998d60bcd6dd28c937af75239 338 Gene3D G3DSA:1.10.287.470 178 209 2.2E-21 T 23-10-2018 CDG62_12155 bca0c02998d60bcd6dd28c937af75239 338 Gene3D G3DSA:1.10.287.470 78 100 2.0E-11 T 23-10-2018 CDG62_12155 bca0c02998d60bcd6dd28c937af75239 338 Pfam PF13437 HlyD family secretion protein 210 316 3.1E-14 T 23-10-2018 CDG62_12155 bca0c02998d60bcd6dd28c937af75239 338 SUPERFAMILY SSF111369 112 173 8.37E-6 T 23-10-2018 CDG62_12155 bca0c02998d60bcd6dd28c937af75239 338 SUPERFAMILY SSF111369 42 117 1.24E-6 T 23-10-2018 CDG62_16025 fdb88918c9d89b954cde6808cfff72c9 220 Pfam PF08378 Nuclease-related domain 37 150 5.6E-31 T 23-10-2018 IPR011528 Nuclease-related domain, NERD CDG62_05925 79d42b2e0481acba3d233dd2819a215a 425 Pfam PF04966 Carbohydrate-selective porin, OprB family 75 425 2.7E-92 T 23-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 CDG62_05925 79d42b2e0481acba3d233dd2819a215a 425 Gene3D G3DSA:2.40.160.180 30 425 4.2E-130 T 23-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily CDG62_14830 2bd88816050a9ca9543c5a7a572be0f6 157 SUPERFAMILY SSF52788 1 135 2.88E-36 T 23-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily CDG62_14830 2bd88816050a9ca9543c5a7a572be0f6 157 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 134 3.9E-22 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CDG62_14830 2bd88816050a9ca9543c5a7a572be0f6 157 SMART SM00226 1 136 4.3E-33 T 23-10-2018 IPR023485 Phosphotyrosine protein phosphatase I CDG62_14830 2bd88816050a9ca9543c5a7a572be0f6 157 Gene3D G3DSA:3.40.50.2300 1 137 5.9E-36 T 23-10-2018 CDG62_10670 79617727dad6b1eb3ea3fb1cf2581ff3 365 Gene3D G3DSA:2.40.160.10 23 365 8.8E-67 T 23-10-2018 IPR023614 Porin domain superfamily CDG62_10670 79617727dad6b1eb3ea3fb1cf2581ff3 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 49 60 1.8E-8 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CDG62_10670 79617727dad6b1eb3ea3fb1cf2581ff3 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 1.8E-8 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CDG62_10670 79617727dad6b1eb3ea3fb1cf2581ff3 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 306 323 1.8E-8 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CDG62_10670 79617727dad6b1eb3ea3fb1cf2581ff3 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 191 203 1.8E-8 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CDG62_10670 79617727dad6b1eb3ea3fb1cf2581ff3 365 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 1.8E-8 T 23-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 CDG62_10670 79617727dad6b1eb3ea3fb1cf2581ff3 365 SUPERFAMILY SSF56935 24 365 3.92E-59 T 23-10-2018 CDG62_10670 79617727dad6b1eb3ea3fb1cf2581ff3 365 Pfam PF13609 Gram-negative porin 9 331 1.9E-46 T 23-10-2018 CDG62_01785 cf1b163de4d00330250e50b865d0c524 172 SUPERFAMILY SSF51306 28 168 5.58E-19 T 23-10-2018 IPR036286 LexA/Signal peptidase-like superfamily CDG62_01785 cf1b163de4d00330250e50b865d0c524 172 Pfam PF00717 Peptidase S24-like 69 114 1.4E-6 T 23-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CDG62_01785 cf1b163de4d00330250e50b865d0c524 172 Gene3D G3DSA:2.10.109.10 38 172 9.0E-31 T 23-10-2018 CDG62_03160 cee356ffb500adb4352c5f190fc89081 483 SMART SM00345 8 67 3.0E-4 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_03160 cee356ffb500adb4352c5f190fc89081 483 Pfam PF00155 Aminotransferase class I and II 122 453 3.2E-30 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG62_03160 cee356ffb500adb4352c5f190fc89081 483 Gene3D G3DSA:3.90.1150.10 107 469 1.1E-83 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_03160 cee356ffb500adb4352c5f190fc89081 483 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 4.1E-6 T 23-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CDG62_03160 cee356ffb500adb4352c5f190fc89081 483 SUPERFAMILY SSF46785 5 71 1.56E-11 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_03160 cee356ffb500adb4352c5f190fc89081 483 Gene3D G3DSA:3.40.640.10 145 363 1.1E-83 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_03160 cee356ffb500adb4352c5f190fc89081 483 SUPERFAMILY SSF53383 102 470 7.09E-81 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_03160 cee356ffb500adb4352c5f190fc89081 483 Gene3D G3DSA:1.10.10.10 1 69 1.3E-13 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_15540 4079f41bb53af483f05518b1a26c407a 243 Pfam PF02661 Fic/DOC family 90 187 2.1E-26 T 23-10-2018 IPR003812 Fido domain CDG62_15540 4079f41bb53af483f05518b1a26c407a 243 SUPERFAMILY SSF140931 67 235 1.02E-47 T 23-10-2018 IPR036597 Fido-like domain superfamily CDG62_15540 4079f41bb53af483f05518b1a26c407a 243 Gene3D G3DSA:1.10.3290.10 2 240 1.7E-77 T 23-10-2018 IPR036597 Fido-like domain superfamily CDG62_04230 b6784db551a4652ff2afa5122c895a44 196 Pfam PF04011 LemA family 10 195 1.3E-66 T 23-10-2018 IPR007156 LemA CDG62_04230 b6784db551a4652ff2afa5122c895a44 196 Gene3D G3DSA:1.20.1440.20 18 195 1.4E-63 T 23-10-2018 IPR023353 LemA-like domain superfamily CDG62_04230 b6784db551a4652ff2afa5122c895a44 196 SUPERFAMILY SSF140478 27 184 3.4E-52 T 23-10-2018 IPR023353 LemA-like domain superfamily CDG62_09610 952447fa9dab52387c361a92309b7803 520 SUPERFAMILY SSF52540 62 350 3.98E-6 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_09610 952447fa9dab52387c361a92309b7803 520 Gene3D G3DSA:3.40.50.300 49 149 2.4E-5 T 23-10-2018 CDG62_09610 952447fa9dab52387c361a92309b7803 520 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 356 510 2.6E-31 T 23-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit CDG62_09610 952447fa9dab52387c361a92309b7803 520 Pfam PF17289 Terminase RNaseH-like domain 345 507 2.3E-10 T 23-10-2018 IPR035421 Terminase, large subunit gp17-like CDG62_14895 893f54422e8c4ac3816b6eebd619145d 484 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 420 5.9E-152 T 23-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CDG62_14895 893f54422e8c4ac3816b6eebd619145d 484 SMART SM00316 37 113 3.8E-13 T 23-10-2018 IPR022967 RNA-binding domain, S1 CDG62_14895 893f54422e8c4ac3816b6eebd619145d 484 Pfam PF10150 Ribonuclease E/G family 115 387 1.3E-99 T 23-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CDG62_14895 893f54422e8c4ac3816b6eebd619145d 484 SUPERFAMILY SSF50249 39 118 9.05E-19 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_14895 893f54422e8c4ac3816b6eebd619145d 484 Pfam PF00575 S1 RNA binding domain 38 111 6.3E-6 T 23-10-2018 IPR003029 S1 domain GO:0003676 CDG62_14895 893f54422e8c4ac3816b6eebd619145d 484 Gene3D G3DSA:2.40.50.140 31 118 1.1E-25 T 23-10-2018 CDG62_03265 e2075f947c9c8c05e479a63d62a51646 212 Gene3D G3DSA:3.40.50.850 2 209 6.3E-78 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_03265 e2075f947c9c8c05e479a63d62a51646 212 SUPERFAMILY SSF52499 3 209 4.32E-51 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_03265 e2075f947c9c8c05e479a63d62a51646 212 Pfam PF00857 Isochorismatase family 6 193 4.0E-32 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 CDG62_15825 e352082131eafca8b805c45e1132b6d8 360 SUPERFAMILY SSF161070 40 356 4.05E-8 T 23-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 CDG62_13075 551b7e68b5f14890bddf829f9bc8ba42 189 ProSitePatterns PS01068 OmpA-like domain. 113 157 - T 23-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CDG62_13075 551b7e68b5f14890bddf829f9bc8ba42 189 SUPERFAMILY SSF103088 68 179 2.62E-34 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG62_13075 551b7e68b5f14890bddf829f9bc8ba42 189 PRINTS PR01021 OMPA domain signature 111 126 8.2E-17 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_13075 551b7e68b5f14890bddf829f9bc8ba42 189 PRINTS PR01021 OMPA domain signature 81 103 8.2E-17 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_13075 551b7e68b5f14890bddf829f9bc8ba42 189 PRINTS PR01021 OMPA domain signature 126 142 8.2E-17 T 23-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CDG62_13075 551b7e68b5f14890bddf829f9bc8ba42 189 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 2 181 29.285 T 23-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 CDG62_13075 551b7e68b5f14890bddf829f9bc8ba42 189 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 79 181 1.5E-42 T 23-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 CDG62_13075 551b7e68b5f14890bddf829f9bc8ba42 189 Gene3D G3DSA:3.30.1330.60 69 182 1.8E-39 T 23-10-2018 IPR036737 OmpA-like domain superfamily CDG62_13075 551b7e68b5f14890bddf829f9bc8ba42 189 Pfam PF00691 OmpA family 81 175 1.2E-20 T 23-10-2018 IPR006665 OmpA-like domain CDG62_03410 051c64b9435cc28bc26a34b0fd11f174 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 5.5E-104 T 23-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE CDG62_03410 051c64b9435cc28bc26a34b0fd11f174 232 Pfam PF00005 ABC transporter 17 161 6.4E-32 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_03410 051c64b9435cc28bc26a34b0fd11f174 232 Gene3D G3DSA:3.40.50.300 1 226 3.2E-60 T 23-10-2018 CDG62_03410 051c64b9435cc28bc26a34b0fd11f174 232 SUPERFAMILY SSF52540 1 218 3.76E-59 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_03410 051c64b9435cc28bc26a34b0fd11f174 232 SMART SM00382 26 218 9.8E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_16730 b94c1843876407c0507a81ff9ec0c0c9 272 Gene3D G3DSA:3.30.565.40 42 157 1.7E-7 T 23-10-2018 CDG62_17185 ee65e138a507df7016edbdd99d7eeac8 81 Pfam PF10982 Protein of unknown function (DUF2789) 5 73 1.4E-26 T 23-10-2018 IPR021250 Protein of unknown function DUF2789 CDG62_17185 ee65e138a507df7016edbdd99d7eeac8 81 Gene3D G3DSA:1.10.10.1130 2 77 6.0E-26 T 23-10-2018 CDG62_00110 35b2bef8ffb545dfad18e777b4a0e790 267 Gene3D G3DSA:3.40.1350.10 6 133 1.3E-9 T 23-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 CDG62_00110 35b2bef8ffb545dfad18e777b4a0e790 267 Pfam PF06319 DNA repair protein MmcB-like 33 103 4.4E-6 T 23-10-2018 IPR009394 DNA repair protein MmcB-like CDG62_10010 e5c4b5f90f98b33c8e57f3629cd97a48 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 23-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 CDG62_10010 e5c4b5f90f98b33c8e57f3629cd97a48 503 Gene3D G3DSA:3.40.605.10 23 489 5.0E-164 T 23-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 CDG62_10010 e5c4b5f90f98b33c8e57f3629cd97a48 503 SUPERFAMILY SSF53720 15 495 1.07E-161 T 23-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 CDG62_10010 e5c4b5f90f98b33c8e57f3629cd97a48 503 Gene3D G3DSA:3.40.309.10 266 461 5.0E-164 T 23-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 CDG62_10010 e5c4b5f90f98b33c8e57f3629cd97a48 503 Pfam PF00171 Aldehyde dehydrogenase family 27 490 7.6E-165 T 23-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 CDG62_10010 e5c4b5f90f98b33c8e57f3629cd97a48 503 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 23-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 CDG62_17420 b33b411ac2e49a384587e412368968d6 340 Hamap MF_00323 Ferrochelatase [hemH]. 7 328 34.584 T 23-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CDG62_17420 b33b411ac2e49a384587e412368968d6 340 Gene3D G3DSA:3.40.50.1400 171 309 9.1E-90 T 23-10-2018 CDG62_17420 b33b411ac2e49a384587e412368968d6 340 Gene3D G3DSA:3.40.50.1400 8 329 9.1E-90 T 23-10-2018 CDG62_17420 b33b411ac2e49a384587e412368968d6 340 Pfam PF00762 Ferrochelatase 8 327 3.6E-97 T 23-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CDG62_17420 b33b411ac2e49a384587e412368968d6 340 TIGRFAM TIGR00109 hemH: ferrochelatase 6 328 3.2E-86 T 23-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CDG62_17420 b33b411ac2e49a384587e412368968d6 340 ProSitePatterns PS00534 Ferrochelatase signature. 197 216 - T 23-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CDG62_17420 b33b411ac2e49a384587e412368968d6 340 SUPERFAMILY SSF53800 7 332 2.13E-89 T 23-10-2018 CDG62_18710 8aee3fc222b2906600f77b8a4347105c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.2E-39 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_18710 8aee3fc222b2906600f77b8a4347105c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.2E-39 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_18710 8aee3fc222b2906600f77b8a4347105c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.2E-39 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_18710 8aee3fc222b2906600f77b8a4347105c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.2E-39 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_18710 8aee3fc222b2906600f77b8a4347105c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.2E-39 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_18710 8aee3fc222b2906600f77b8a4347105c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 4.2E-39 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_18710 8aee3fc222b2906600f77b8a4347105c 241 Gene3D G3DSA:3.40.50.720 1 241 7.1E-75 T 23-10-2018 CDG62_18710 8aee3fc222b2906600f77b8a4347105c 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 1.8E-4 T 23-10-2018 CDG62_18710 8aee3fc222b2906600f77b8a4347105c 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 1.6E-57 T 23-10-2018 CDG62_18710 8aee3fc222b2906600f77b8a4347105c 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 6.5E-121 T 23-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CDG62_18710 8aee3fc222b2906600f77b8a4347105c 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.5E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_18710 8aee3fc222b2906600f77b8a4347105c 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.5E-6 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_18710 8aee3fc222b2906600f77b8a4347105c 241 SUPERFAMILY SSF51735 2 240 1.43E-76 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_13720 5b3ec3b579ff2d21c3eff47979cef4c3 210 Gene3D G3DSA:1.20.120.740 2 178 1.2E-39 T 23-10-2018 CDG62_13720 5b3ec3b579ff2d21c3eff47979cef4c3 210 Pfam PF03695 Uncharacterised protein family (UPF0149) 22 164 7.3E-24 T 23-10-2018 IPR011978 Uncharacterised protein family UPF0149 CDG62_13720 5b3ec3b579ff2d21c3eff47979cef4c3 210 SUPERFAMILY SSF101327 7 166 2.22E-37 T 23-10-2018 IPR036255 YgfB-like superfamily CDG62_09975 1d463301a75a45600728bf710980e709 234 SUPERFAMILY SSF52317 40 231 1.33E-45 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_09975 1d463301a75a45600728bf710980e709 234 Pfam PF00117 Glutamine amidotransferase class-I 25 181 2.1E-18 T 23-10-2018 IPR017926 Glutamine amidotransferase CDG62_09975 1d463301a75a45600728bf710980e709 234 Gene3D G3DSA:3.40.50.880 3 231 4.0E-55 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_18825 f70c060443d0562a992a972968c71dbf 305 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 304 28.75 T 23-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CDG62_18825 f70c060443d0562a992a972968c71dbf 305 SUPERFAMILY SSF56042 140 292 1.22E-34 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG62_18825 f70c060443d0562a992a972968c71dbf 305 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 304 3.0E-106 T 23-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CDG62_18825 f70c060443d0562a992a972968c71dbf 305 Gene3D G3DSA:3.30.1330.10 1 141 1.1E-47 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG62_18825 f70c060443d0562a992a972968c71dbf 305 Pfam PF02769 AIR synthase related protein, C-terminal domain 184 286 8.8E-9 T 23-10-2018 IPR010918 PurM-like, C-terminal domain CDG62_18825 f70c060443d0562a992a972968c71dbf 305 SUPERFAMILY SSF55326 2 136 2.09E-38 T 23-10-2018 IPR036921 PurM-like, N-terminal domain superfamily CDG62_18825 f70c060443d0562a992a972968c71dbf 305 Gene3D G3DSA:3.90.650.10 142 305 1.2E-47 T 23-10-2018 IPR036676 PurM-like, C-terminal domain superfamily CDG62_18825 f70c060443d0562a992a972968c71dbf 305 Pfam PF00586 AIR synthase related protein, N-terminal domain 25 135 1.6E-27 T 23-10-2018 IPR016188 PurM-like, N-terminal domain CDG62_18825 f70c060443d0562a992a972968c71dbf 305 PIRSF PIRSF005303 1 304 2.8E-93 T 23-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CDG62_03595 e86bbe4255d9816f315cd8f947bacae3 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 3.9E-186 T 23-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CDG62_03595 e86bbe4255d9816f315cd8f947bacae3 488 Gene3D G3DSA:3.20.20.70 2 487 5.4E-206 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_03595 e86bbe4255d9816f315cd8f947bacae3 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 474 7.8E-158 T 23-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CDG62_03595 e86bbe4255d9816f315cd8f947bacae3 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 487 82.098 T 23-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CDG62_03595 e86bbe4255d9816f315cd8f947bacae3 488 Pfam PF00571 CBS domain 157 203 0.0015 T 23-10-2018 IPR000644 CBS domain CDG62_03595 e86bbe4255d9816f315cd8f947bacae3 488 Pfam PF00571 CBS domain 89 137 4.7E-11 T 23-10-2018 IPR000644 CBS domain CDG62_03595 e86bbe4255d9816f315cd8f947bacae3 488 PIRSF PIRSF000130 1 488 1.6E-200 T 23-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CDG62_03595 e86bbe4255d9816f315cd8f947bacae3 488 SUPERFAMILY SSF51412 3 478 1.83E-124 T 23-10-2018 CDG62_03595 e86bbe4255d9816f315cd8f947bacae3 488 SMART SM00116 157 205 2.1E-5 T 23-10-2018 IPR000644 CBS domain CDG62_03595 e86bbe4255d9816f315cd8f947bacae3 488 SMART SM00116 96 143 7.6E-9 T 23-10-2018 IPR000644 CBS domain CDG62_03595 e86bbe4255d9816f315cd8f947bacae3 488 SUPERFAMILY SSF54631 93 202 1.06E-26 T 23-10-2018 CDG62_03595 e86bbe4255d9816f315cd8f947bacae3 488 SMART SM01240 7 474 0.0 T 23-10-2018 CDG62_03595 e86bbe4255d9816f315cd8f947bacae3 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 23-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CDG62_00085 f29c5cac0f73aa41ae7a67c5489b82fa 238 SUPERFAMILY SSF53335 1 231 5.15E-49 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_00085 f29c5cac0f73aa41ae7a67c5489b82fa 238 Gene3D G3DSA:3.40.50.150 1 237 4.6E-59 T 23-10-2018 CDG62_00085 f29c5cac0f73aa41ae7a67c5489b82fa 238 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 42 62 3.8E-30 T 23-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CDG62_00085 f29c5cac0f73aa41ae7a67c5489b82fa 238 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 169 186 3.8E-30 T 23-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CDG62_00085 f29c5cac0f73aa41ae7a67c5489b82fa 238 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 188 206 3.8E-30 T 23-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CDG62_00085 f29c5cac0f73aa41ae7a67c5489b82fa 238 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 211 231 3.8E-30 T 23-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CDG62_00085 f29c5cac0f73aa41ae7a67c5489b82fa 238 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 16 30 3.8E-30 T 23-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CDG62_00085 f29c5cac0f73aa41ae7a67c5489b82fa 238 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 20 26 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG62_00085 f29c5cac0f73aa41ae7a67c5489b82fa 238 Pfam PF01555 DNA methylase 17 227 5.8E-32 T 23-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CDG62_10195 71151319c0664c07a0f3353b2334eee6 198 Gene3D G3DSA:3.30.479.10 1 145 1.6E-22 T 23-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 CDG62_10195 71151319c0664c07a0f3353b2334eee6 198 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 143 4.2E-26 T 23-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 CDG62_10195 71151319c0664c07a0f3353b2334eee6 198 SUPERFAMILY SSF55620 1 145 8.89E-31 T 23-10-2018 CDG62_00845 f343c499406324e07c8431e85e17d5b2 410 SUPERFAMILY SSF52540 7 177 4.36E-16 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00845 f343c499406324e07c8431e85e17d5b2 410 Pfam PF13635 Domain of unknown function (DUF4143) 249 353 1.0E-8 T 23-10-2018 IPR025420 Domain of unknown function DUF4143 CDG62_00845 f343c499406324e07c8431e85e17d5b2 410 Pfam PF13173 AAA domain 24 152 4.8E-35 T 23-10-2018 CDG62_01665 7f5c079061643c41df2fe6865887470b 97 Gene3D G3DSA:3.30.70.100 1 96 6.4E-22 T 23-10-2018 CDG62_01665 7f5c079061643c41df2fe6865887470b 97 SUPERFAMILY SSF54909 1 95 2.68E-23 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_01665 7f5c079061643c41df2fe6865887470b 97 Pfam PF07045 Domain of unknown function (DUF1330) 4 95 7.5E-21 T 23-10-2018 IPR010753 Domain of unknown function DUF1330 CDG62_05020 dcc5a04d875905701bbbec8b82eb9ee1 85 Pfam PF10982 Protein of unknown function (DUF2789) 4 75 1.4E-23 T 23-10-2018 IPR021250 Protein of unknown function DUF2789 CDG62_05020 dcc5a04d875905701bbbec8b82eb9ee1 85 Gene3D G3DSA:1.10.10.1130 1 79 1.2E-23 T 23-10-2018 CDG62_14730 1ef89c066e1c76f7957be7f647c2f1ea 374 Gene3D G3DSA:2.40.160.10 21 374 2.5E-53 T 23-10-2018 IPR023614 Porin domain superfamily CDG62_14730 1ef89c066e1c76f7957be7f647c2f1ea 374 Pfam PF13609 Gram-negative porin 7 349 7.2E-29 T 23-10-2018 CDG62_14730 1ef89c066e1c76f7957be7f647c2f1ea 374 SUPERFAMILY SSF56935 22 374 1.43E-46 T 23-10-2018 CDG62_03390 df37f2680a6780419918c04569782952 427 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 49 422 4.9E-180 T 23-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like CDG62_03390 df37f2680a6780419918c04569782952 427 Pfam PF13433 Periplasmic binding protein domain 49 426 5.3E-173 T 23-10-2018 CDG62_03390 df37f2680a6780419918c04569782952 427 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 308 321 4.7E-5 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDG62_03390 df37f2680a6780419918c04569782952 427 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 4.7E-5 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDG62_03390 df37f2680a6780419918c04569782952 427 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 87 4.7E-5 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDG62_03390 df37f2680a6780419918c04569782952 427 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 112 122 4.7E-5 T 23-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CDG62_03390 df37f2680a6780419918c04569782952 427 Gene3D G3DSA:3.40.50.2300 164 412 1.2E-137 T 23-10-2018 CDG62_03390 df37f2680a6780419918c04569782952 427 Gene3D G3DSA:3.40.50.2300 51 393 1.2E-137 T 23-10-2018 CDG62_03390 df37f2680a6780419918c04569782952 427 SUPERFAMILY SSF53822 48 425 1.97E-89 T 23-10-2018 IPR028082 Periplasmic binding protein-like I CDG62_15895 d06a6cb342f3b2f3eca0e43b9fd663c6 301 Pfam PF03547 Membrane transport protein 155 296 3.6E-10 T 23-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CDG62_15895 d06a6cb342f3b2f3eca0e43b9fd663c6 301 Gene3D G3DSA:1.20.1530.20 165 300 1.0E-5 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG62_10695 4a93c58005446c7dee881cbf1d346a62 236 Gene3D G3DSA:3.10.620.30 1 139 4.6E-14 T 23-10-2018 CDG62_10695 4a93c58005446c7dee881cbf1d346a62 236 Pfam PF01841 Transglutaminase-like superfamily 31 132 3.9E-14 T 23-10-2018 IPR002931 Transglutaminase-like CDG62_10695 4a93c58005446c7dee881cbf1d346a62 236 SUPERFAMILY SSF54001 15 142 4.21E-19 T 23-10-2018 IPR038765 Papain-like cysteine peptidase superfamily CDG62_10525 6a6a7b34caa6b670d2cc3b8b38ad5c63 303 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 3 283 5.9E-57 T 23-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 CDG62_08825 0a85bc793d5e310f372c649d05eb4d02 256 Pfam PF00899 ThiF family 18 250 1.0E-62 T 23-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CDG62_08825 0a85bc793d5e310f372c649d05eb4d02 256 SUPERFAMILY SSF69572 8 254 2.09E-82 T 23-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CDG62_08825 0a85bc793d5e310f372c649d05eb4d02 256 Gene3D G3DSA:3.40.50.720 10 256 2.5E-83 T 23-10-2018 CDG62_06680 3de86c75e5081f10232df1ecae0e3454 394 Gene3D G3DSA:3.40.50.1970 1 188 2.5E-58 T 23-10-2018 CDG62_06680 3de86c75e5081f10232df1ecae0e3454 394 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 177 205 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CDG62_06680 3de86c75e5081f10232df1ecae0e3454 394 Gene3D G3DSA:1.20.1090.10 190 394 1.7E-56 T 23-10-2018 CDG62_06680 3de86c75e5081f10232df1ecae0e3454 394 SUPERFAMILY SSF56796 5 394 4.58E-111 T 23-10-2018 CDG62_06680 3de86c75e5081f10232df1ecae0e3454 394 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 23-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CDG62_06680 3de86c75e5081f10232df1ecae0e3454 394 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 385 1.8E-108 T 23-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CDG62_05690 0ff08a9172d4a290e1b02d51f901c68e 406 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 31 404 2.0E-168 T 23-10-2018 CDG62_05690 0ff08a9172d4a290e1b02d51f901c68e 406 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 406 150.938 T 23-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDG62_05690 0ff08a9172d4a290e1b02d51f901c68e 406 Gene3D G3DSA:3.60.70.12 7 276 4.1E-87 T 23-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDG62_05690 0ff08a9172d4a290e1b02d51f901c68e 406 Gene3D G3DSA:3.10.20.340 277 406 1.2E-43 T 23-10-2018 CDG62_05690 0ff08a9172d4a290e1b02d51f901c68e 406 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 12 406 1.1E-120 T 23-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDG62_05690 0ff08a9172d4a290e1b02d51f901c68e 406 Pfam PF01960 ArgJ family 21 406 1.8E-139 T 23-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDG62_05690 0ff08a9172d4a290e1b02d51f901c68e 406 SUPERFAMILY SSF56266 14 403 9.81E-137 T 23-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CDG62_12325 597a85da2588138ace9a39239678a1b0 845 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 197 1.8E-19 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_12325 597a85da2588138ace9a39239678a1b0 845 Gene3D G3DSA:2.40.170.20 322 845 1.1E-55 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_12325 597a85da2588138ace9a39239678a1b0 845 Gene3D G3DSA:2.170.130.10 54 201 5.1E-30 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_12325 597a85da2588138ace9a39239678a1b0 845 SUPERFAMILY SSF56935 59 845 2.2E-91 T 23-10-2018 CDG62_12325 597a85da2588138ace9a39239678a1b0 845 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 66 - T 23-10-2018 IPR010916 TonB box, conserved site CDG62_12325 597a85da2588138ace9a39239678a1b0 845 Pfam PF00593 TonB dependent receptor 318 843 6.0E-31 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_04115 e2643fff2324ce0410fadc0dad9f096d 502 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 470 30.08 T 23-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CDG62_04115 e2643fff2324ce0410fadc0dad9f096d 502 SUPERFAMILY SSF52374 3 307 3.22E-112 T 23-10-2018 CDG62_04115 e2643fff2324ce0410fadc0dad9f096d 502 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 319 6.4E-112 T 23-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 CDG62_04115 e2643fff2324ce0410fadc0dad9f096d 502 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 468 4.1E-142 T 23-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CDG62_04115 e2643fff2324ce0410fadc0dad9f096d 502 Gene3D G3DSA:1.10.10.350 370 493 7.3E-28 T 23-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CDG62_04115 e2643fff2324ce0410fadc0dad9f096d 502 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 23-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_04115 e2643fff2324ce0410fadc0dad9f096d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 7.1E-22 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG62_04115 e2643fff2324ce0410fadc0dad9f096d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 202 7.1E-22 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG62_04115 e2643fff2324ce0410fadc0dad9f096d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 7.1E-22 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG62_04115 e2643fff2324ce0410fadc0dad9f096d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 216 7.1E-22 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG62_04115 e2643fff2324ce0410fadc0dad9f096d 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 7.1E-22 T 23-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 CDG62_04115 e2643fff2324ce0410fadc0dad9f096d 502 Gene3D G3DSA:3.40.50.620 1 327 1.6E-150 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_04115 e2643fff2324ce0410fadc0dad9f096d 502 SUPERFAMILY SSF48163 313 471 2.09E-33 T 23-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CDG62_17595 fca3f2481b88c51164cd4482d12c5122 428 SUPERFAMILY SSF51905 9 398 1.17E-53 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_17595 fca3f2481b88c51164cd4482d12c5122 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.3E-16 T 23-10-2018 CDG62_17595 fca3f2481b88c51164cd4482d12c5122 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 1.3E-16 T 23-10-2018 CDG62_17595 fca3f2481b88c51164cd4482d12c5122 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 1.3E-16 T 23-10-2018 CDG62_17595 fca3f2481b88c51164cd4482d12c5122 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.3E-16 T 23-10-2018 CDG62_17595 fca3f2481b88c51164cd4482d12c5122 428 Gene3D G3DSA:3.30.9.30 41 291 8.8E-53 T 23-10-2018 CDG62_17595 fca3f2481b88c51164cd4482d12c5122 428 Gene3D G3DSA:3.50.50.60 10 355 8.8E-53 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_17595 fca3f2481b88c51164cd4482d12c5122 428 Pfam PF01494 FAD binding domain 10 355 5.4E-25 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 CDG62_18080 58b20a9c5c35825e763617e727873f13 238 Gene3D G3DSA:1.20.58.220 3 120 5.1E-39 T 23-10-2018 IPR038078 PhoU-like domain superfamily CDG62_18080 58b20a9c5c35825e763617e727873f13 238 SUPERFAMILY SSF109755 13 234 6.38E-66 T 23-10-2018 CDG62_18080 58b20a9c5c35825e763617e727873f13 238 Gene3D G3DSA:1.20.58.220 121 234 6.6E-33 T 23-10-2018 IPR038078 PhoU-like domain superfamily CDG62_18080 58b20a9c5c35825e763617e727873f13 238 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 223 6.9E-65 T 23-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CDG62_18080 58b20a9c5c35825e763617e727873f13 238 Pfam PF01895 PhoU domain 131 214 7.0E-16 T 23-10-2018 IPR026022 PhoU domain CDG62_18080 58b20a9c5c35825e763617e727873f13 238 Pfam PF01895 PhoU domain 28 113 5.9E-18 T 23-10-2018 IPR026022 PhoU domain CDG62_18080 58b20a9c5c35825e763617e727873f13 238 PIRSF PIRSF003107 8 229 8.8E-65 T 23-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CDG62_01690 775bc9044215c57c7883de46e0209c6f 234 Gene3D G3DSA:3.40.30.10 7 230 4.7E-104 T 23-10-2018 CDG62_01690 775bc9044215c57c7883de46e0209c6f 234 Pfam PF02798 Glutathione S-transferase, N-terminal domain 21 98 6.3E-13 T 23-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CDG62_01690 775bc9044215c57c7883de46e0209c6f 234 Gene3D G3DSA:1.20.1050.10 106 220 4.7E-104 T 23-10-2018 CDG62_01690 775bc9044215c57c7883de46e0209c6f 234 SUPERFAMILY SSF52833 11 102 6.41E-22 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_01690 775bc9044215c57c7883de46e0209c6f 234 Pfam PF00043 Glutathione S-transferase, C-terminal domain 144 221 7.3E-7 T 23-10-2018 IPR004046 Glutathione S-transferase, C-terminal CDG62_01690 775bc9044215c57c7883de46e0209c6f 234 SUPERFAMILY SSF47616 108 229 7.1E-28 T 23-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CDG62_15125 dd933e9a5f904d0c76009e2b4a228d54 241 Pfam PF00775 Dioxygenase 47 229 2.6E-46 T 23-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CDG62_15125 dd933e9a5f904d0c76009e2b4a228d54 241 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 81 109 - T 23-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CDG62_15125 dd933e9a5f904d0c76009e2b4a228d54 241 SUPERFAMILY SSF49482 9 238 3.01E-73 T 23-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CDG62_15125 dd933e9a5f904d0c76009e2b4a228d54 241 Gene3D G3DSA:2.60.130.10 1 241 5.4E-103 T 23-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CDG62_15125 dd933e9a5f904d0c76009e2b4a228d54 241 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 11 43 5.6E-15 T 23-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 CDG62_15125 dd933e9a5f904d0c76009e2b4a228d54 241 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 17 238 9.9E-107 T 23-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 CDG62_18150 5d7487b3e849d4007aa0c4410dce0314 269 Gene3D G3DSA:3.40.30.10 119 269 8.7E-38 T 23-10-2018 CDG62_18150 5d7487b3e849d4007aa0c4410dce0314 269 SUPERFAMILY SSF54423 67 117 2.75E-8 T 23-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CDG62_18150 5d7487b3e849d4007aa0c4410dce0314 269 Gene3D G3DSA:3.10.450.70 58 118 2.3E-6 T 23-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 CDG62_18150 5d7487b3e849d4007aa0c4410dce0314 269 SUPERFAMILY SSF52833 133 269 2.21E-30 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_18150 5d7487b3e849d4007aa0c4410dce0314 269 Pfam PF10411 Disulfide bond isomerase protein N-terminus 64 116 1.3E-11 T 23-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CDG62_18150 5d7487b3e849d4007aa0c4410dce0314 269 Pfam PF13098 Thioredoxin-like domain 147 267 3.9E-25 T 23-10-2018 IPR012336 Thioredoxin-like fold CDG62_03010 645f1792c2e8ec9c325128503e92fe33 452 Gene3D G3DSA:1.20.1250.20 21 430 3.0E-73 T 23-10-2018 CDG62_03010 645f1792c2e8ec9c325128503e92fe33 452 Pfam PF07690 Major Facilitator Superfamily 29 305 2.6E-31 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_03010 645f1792c2e8ec9c325128503e92fe33 452 SUPERFAMILY SSF103473 11 430 1.11E-78 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_03010 645f1792c2e8ec9c325128503e92fe33 452 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_11090 3a475707ca86b3941bab8c097552bbcf 235 SUPERFAMILY SSF51735 6 235 1.14E-56 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_11090 3a475707ca86b3941bab8c097552bbcf 235 Pfam PF00106 short chain dehydrogenase 6 196 1.9E-25 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11090 3a475707ca86b3941bab8c097552bbcf 235 Gene3D G3DSA:3.40.50.720 2 235 1.9E-52 T 23-10-2018 CDG62_11090 3a475707ca86b3941bab8c097552bbcf 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.4E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11090 3a475707ca86b3941bab8c097552bbcf 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.4E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11090 3a475707ca86b3941bab8c097552bbcf 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.4E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_11090 3a475707ca86b3941bab8c097552bbcf 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.4E-13 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_00625 de635618f1fa5113eddb832cb7234c2d 93 Gene3D G3DSA:3.30.2310.20 3 93 1.3E-24 T 23-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CDG62_00625 de635618f1fa5113eddb832cb7234c2d 93 SUPERFAMILY SSF143011 1 92 4.32E-20 T 23-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CDG62_00625 de635618f1fa5113eddb832cb7234c2d 93 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 92 5.6E-20 T 23-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CDG62_00625 de635618f1fa5113eddb832cb7234c2d 93 PIRSF PIRSF006156 3 93 1.4E-19 T 23-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin CDG62_00625 de635618f1fa5113eddb832cb7234c2d 93 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 5 93 1.3E-24 T 23-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin CDG62_03505 5b98c288e8c04f936f679dfed0756071 65 Pfam PF12088 Protein of unknown function (DUF3565) 6 62 4.0E-32 T 23-10-2018 IPR021948 Protein of unknown function DUF3565 CDG62_12690 4fa428e0e871c4fde9d8f76fce201279 233 Pfam PF04402 Protein of unknown function (DUF541) 32 228 5.3E-26 T 23-10-2018 IPR007497 Protein of unknown function DUF541 CDG62_12690 4fa428e0e871c4fde9d8f76fce201279 233 Gene3D G3DSA:3.30.110.170 34 226 2.6E-20 T 23-10-2018 CDG62_12690 4fa428e0e871c4fde9d8f76fce201279 233 Gene3D G3DSA:3.30.70.2970 44 146 2.6E-20 T 23-10-2018 CDG62_09190 a62564f0a75ad0b3ca6a3c83206c29ce 239 SUPERFAMILY SSF53448 15 236 4.28E-53 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_09190 a62564f0a75ad0b3ca6a3c83206c29ce 239 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 16 236 8.6E-66 T 23-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CDG62_09190 a62564f0a75ad0b3ca6a3c83206c29ce 239 Gene3D G3DSA:3.90.550.10 11 239 4.8E-68 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_09190 a62564f0a75ad0b3ca6a3c83206c29ce 239 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 16 237 5.8E-64 T 23-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CDG62_09190 a62564f0a75ad0b3ca6a3c83206c29ce 239 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 14 236 40.693 T 23-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CDG62_04655 50f3d1da56a43776649cd46899b84130 149 Pfam PF02082 Transcriptional regulator 1 81 2.7E-17 T 23-10-2018 IPR000944 Transcription regulator Rrf2-type CDG62_04655 50f3d1da56a43776649cd46899b84130 149 Gene3D G3DSA:1.10.10.10 1 140 2.0E-25 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_04655 50f3d1da56a43776649cd46899b84130 149 SUPERFAMILY SSF46785 2 129 2.21E-28 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_04655 50f3d1da56a43776649cd46899b84130 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 1.6E-24 T 23-10-2018 IPR000944 Transcription regulator Rrf2-type CDG62_10935 15e5f586bab824058548ddd9cdcc9b69 340 Gene3D G3DSA:3.40.190.10 148 339 2.9E-21 T 23-10-2018 CDG62_10935 15e5f586bab824058548ddd9cdcc9b69 340 SUPERFAMILY SSF53850 39 254 2.11E-34 T 23-10-2018 CDG62_10935 15e5f586bab824058548ddd9cdcc9b69 340 Gene3D G3DSA:3.40.190.10 28 147 4.1E-12 T 23-10-2018 CDG62_10935 15e5f586bab824058548ddd9cdcc9b69 340 Pfam PF09084 NMT1/THI5 like 51 252 3.1E-16 T 23-10-2018 IPR015168 SsuA/THI5-like CDG62_14890 60f2130d9ca3c4d285f687ffb10febd3 459 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 4 446 2.9E-156 T 23-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 CDG62_14890 60f2130d9ca3c4d285f687ffb10febd3 459 Pfam PF06974 Protein of unknown function (DUF1298) 300 443 2.7E-41 T 23-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 CDG62_14890 60f2130d9ca3c4d285f687ffb10febd3 459 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 4 261 3.4E-66 T 23-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 CDG62_08090 19a124063f3bf94ff83ddacf988b766f 209 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 207 1.2E-98 T 23-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CDG62_08090 19a124063f3bf94ff83ddacf988b766f 209 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 23-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 CDG62_08090 19a124063f3bf94ff83ddacf988b766f 209 Gene3D G3DSA:3.40.1080.10 2 208 7.2E-102 T 23-10-2018 CDG62_08090 19a124063f3bf94ff83ddacf988b766f 209 SMART SM00882 6 202 1.1E-75 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_08090 19a124063f3bf94ff83ddacf988b766f 209 Pfam PF01144 Coenzyme A transferase 7 199 1.2E-43 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_08090 19a124063f3bf94ff83ddacf988b766f 209 SUPERFAMILY SSF100950 3 208 5.02E-74 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG62_10275 6900d50fe45bce5f6518c56652436f35 220 SUPERFAMILY SSF143081 23 203 4.06E-41 T 23-10-2018 IPR036590 SOS response associated peptidase-like CDG62_10275 6900d50fe45bce5f6518c56652436f35 220 Gene3D G3DSA:3.90.1680.10 1 211 7.1E-43 T 23-10-2018 IPR036590 SOS response associated peptidase-like CDG62_10275 6900d50fe45bce5f6518c56652436f35 220 Pfam PF02586 SOS response associated peptidase (SRAP) 45 205 4.2E-25 T 23-10-2018 IPR003738 SOS response associated peptidase (SRAP) CDG62_14745 4eefafbfd2442a35f87483b05ee88f1c 305 SUPERFAMILY SSF52151 34 288 1.44E-58 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG62_14745 4eefafbfd2442a35f87483b05ee88f1c 305 Pfam PF01734 Patatin-like phospholipase 42 198 3.7E-26 T 23-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CDG62_14745 4eefafbfd2442a35f87483b05ee88f1c 305 Gene3D G3DSA:3.40.1090.10 28 138 2.6E-25 T 23-10-2018 CDG62_04645 15b597e8b3920e0ccc71f79027ce226c 314 Pfam PF10118 Predicted metal-dependent hydrolase 21 290 1.5E-66 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG62_04645 15b597e8b3920e0ccc71f79027ce226c 314 PIRSF PIRSF007580 7 310 2.1E-82 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG62_12235 8f559fc950f2b2424a540c6ffba59116 294 SUPERFAMILY SSF103481 46 140 2.35E-6 T 23-10-2018 CDG62_12235 8f559fc950f2b2424a540c6ffba59116 294 SUPERFAMILY SSF103481 190 289 2.49E-7 T 23-10-2018 CDG62_12235 8f559fc950f2b2424a540c6ffba59116 294 Pfam PF00892 EamA-like transporter family 158 285 3.6E-10 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_14345 151a8db0a894db177d14a7957a18985d 491 Pfam PF01235 Sodium:alanine symporter family 59 474 6.2E-155 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_14345 151a8db0a894db177d14a7957a18985d 491 TIGRFAM TIGR00835 agcS: amino acid carrier protein 21 461 7.7E-153 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_14345 151a8db0a894db177d14a7957a18985d 491 PRINTS PR00175 Sodium/alanine symporter signature 430 450 3.8E-54 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_14345 151a8db0a894db177d14a7957a18985d 491 PRINTS PR00175 Sodium/alanine symporter signature 370 392 3.8E-54 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_14345 151a8db0a894db177d14a7957a18985d 491 PRINTS PR00175 Sodium/alanine symporter signature 325 343 3.8E-54 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_14345 151a8db0a894db177d14a7957a18985d 491 PRINTS PR00175 Sodium/alanine symporter signature 96 118 3.8E-54 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_14345 151a8db0a894db177d14a7957a18985d 491 PRINTS PR00175 Sodium/alanine symporter signature 202 220 3.8E-54 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_14345 151a8db0a894db177d14a7957a18985d 491 PRINTS PR00175 Sodium/alanine symporter signature 230 249 3.8E-54 T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_14345 151a8db0a894db177d14a7957a18985d 491 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 96 111 - T 23-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CDG62_17560 6a8f63060b7405e7aaff5a7e111be6f6 475 Gene3D G3DSA:3.40.50.300 3 224 6.1E-42 T 23-10-2018 CDG62_17560 6a8f63060b7405e7aaff5a7e111be6f6 475 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 256 471 9.8E-76 T 23-10-2018 IPR022488 Polyphosphate kinase-2-related CDG62_17560 6a8f63060b7405e7aaff5a7e111be6f6 475 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 16 220 3.1E-21 T 23-10-2018 IPR022488 Polyphosphate kinase-2-related CDG62_17560 6a8f63060b7405e7aaff5a7e111be6f6 475 Gene3D G3DSA:3.40.50.300 225 473 1.4E-86 T 23-10-2018 CDG62_17560 6a8f63060b7405e7aaff5a7e111be6f6 475 SUPERFAMILY SSF52540 281 469 6.86E-25 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_03785 10ed8811682a93918731bbe6f6bec77e 472 Gene3D G3DSA:1.10.275.10 5 143 1.3E-53 T 23-10-2018 IPR024083 Fumarase/histidase, N-terminal CDG62_03785 10ed8811682a93918731bbe6f6bec77e 472 Gene3D G3DSA:1.10.40.30 413 462 2.1E-13 T 23-10-2018 CDG62_03785 10ed8811682a93918731bbe6f6bec77e 472 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 23-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CDG62_03785 10ed8811682a93918731bbe6f6bec77e 472 Pfam PF10415 Fumarase C C-terminus 413 466 1.1E-13 T 23-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CDG62_03785 10ed8811682a93918731bbe6f6bec77e 472 Pfam PF00206 Lyase 16 346 2.0E-93 T 23-10-2018 IPR022761 Fumarate lyase, N-terminal CDG62_03785 10ed8811682a93918731bbe6f6bec77e 472 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 1.9E-27 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_03785 10ed8811682a93918731bbe6f6bec77e 472 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 1.9E-27 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_03785 10ed8811682a93918731bbe6f6bec77e 472 PRINTS PR00149 Fumarate lyase superfamily signature 184 202 1.9E-27 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_03785 10ed8811682a93918731bbe6f6bec77e 472 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 1.9E-27 T 23-10-2018 IPR000362 Fumarate lyase family CDG62_03785 10ed8811682a93918731bbe6f6bec77e 472 Gene3D G3DSA:1.20.200.10 144 411 9.5E-105 T 23-10-2018 CDG62_03785 10ed8811682a93918731bbe6f6bec77e 472 SUPERFAMILY SSF48557 6 465 5.97E-131 T 23-10-2018 IPR008948 L-Aspartase-like GO:0003824 CDG62_08605 9beb2be0ff7814b76031033622824e1f 89 PIRSF PIRSF002097 1 87 5.7E-35 T 23-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CDG62_08605 9beb2be0ff7814b76031033622824e1f 89 Pfam PF02954 Bacterial regulatory protein, Fis family 44 83 3.2E-15 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG62_08605 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 50 67 1.3E-12 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG62_08605 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 67 87 1.3E-12 T 23-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CDG62_08605 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 46 58 2.0E-9 T 23-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CDG62_08605 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 31 46 2.0E-9 T 23-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CDG62_08605 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 15 31 2.0E-9 T 23-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CDG62_08605 9beb2be0ff7814b76031033622824e1f 89 Gene3D G3DSA:1.10.10.60 2 86 7.0E-27 T 23-10-2018 CDG62_08605 9beb2be0ff7814b76031033622824e1f 89 SUPERFAMILY SSF46689 15 86 6.27E-22 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_03960 8ce60d57086da799c99dd8ea22ad19f8 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 1.8E-113 T 23-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CDG62_03960 8ce60d57086da799c99dd8ea22ad19f8 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 48.431 T 23-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CDG62_03960 8ce60d57086da799c99dd8ea22ad19f8 252 Pfam PF00977 Histidine biosynthesis protein 5 234 7.6E-88 T 23-10-2018 IPR006062 Histidine biosynthesis GO:0000105 CDG62_03960 8ce60d57086da799c99dd8ea22ad19f8 252 Gene3D G3DSA:3.20.20.70 1 252 1.6E-109 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_03960 8ce60d57086da799c99dd8ea22ad19f8 252 SUPERFAMILY SSF51366 1 251 1.41E-85 T 23-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 CDG62_08610 bcdee56b975887ba7312267b7c3cefc6 299 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 40 3.7E-8 T 23-10-2018 IPR011723 Zinc finger/thioredoxin putative CDG62_08610 bcdee56b975887ba7312267b7c3cefc6 299 Pfam PF11906 Protein of unknown function (DUF3426) 159 296 6.8E-10 T 23-10-2018 IPR021834 Protein of unknown function DUF3426 CDG62_14860 ff2b5f828c9f94da559c617fa047617b 339 Gene3D G3DSA:1.10.10.60 230 338 1.1E-20 T 23-10-2018 CDG62_14860 ff2b5f828c9f94da559c617fa047617b 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 315 331 4.6E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_14860 ff2b5f828c9f94da559c617fa047617b 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 315 4.6E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_14860 ff2b5f828c9f94da559c617fa047617b 339 SMART SM00342 249 331 1.7E-19 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_14860 ff2b5f828c9f94da559c617fa047617b 339 Pfam PF12833 Helix-turn-helix domain 258 331 1.4E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_14860 ff2b5f828c9f94da559c617fa047617b 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 203 2.8E-32 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG62_14860 ff2b5f828c9f94da559c617fa047617b 339 SUPERFAMILY SSF46689 284 334 5.38E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_10265 e786791a86f30b57f7a1359bf372766c 383 Pfam PF03969 AFG1-like ATPase 14 366 4.8E-129 T 23-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 CDG62_10265 e786791a86f30b57f7a1359bf372766c 383 SUPERFAMILY SSF52540 56 196 1.09E-14 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10265 e786791a86f30b57f7a1359bf372766c 383 Gene3D G3DSA:3.40.50.300 25 199 1.4E-21 T 23-10-2018 CDG62_10265 e786791a86f30b57f7a1359bf372766c 383 Hamap MF_01919 Cell division protein ZapE [zapE]. 13 371 50.516 T 23-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 CDG62_08570 2132f312f694f960c569af19c2c67d29 231 Gene3D G3DSA:1.10.3720.10 20 230 2.6E-44 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_08570 2132f312f694f960c569af19c2c67d29 231 SUPERFAMILY SSF161098 25 219 1.28E-42 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_08570 2132f312f694f960c569af19c2c67d29 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 63 228 1.7E-16 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_06965 2bd111de9d3a2fecdb8bf19ca81b2fa9 570 Pfam PF01145 SPFH domain / Band 7 family 41 185 7.4E-18 T 23-10-2018 IPR001107 Band 7 domain CDG62_06965 2bd111de9d3a2fecdb8bf19ca81b2fa9 570 Gene3D G3DSA:3.30.479.30 68 187 2.5E-26 T 23-10-2018 CDG62_06965 2bd111de9d3a2fecdb8bf19ca81b2fa9 570 Pfam PF15975 Flotillin 427 551 7.4E-40 T 23-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 CDG62_06965 2bd111de9d3a2fecdb8bf19ca81b2fa9 570 SMART SM00244 28 197 3.3E-5 T 23-10-2018 IPR001107 Band 7 domain CDG62_06965 2bd111de9d3a2fecdb8bf19ca81b2fa9 570 SUPERFAMILY SSF117892 59 186 4.84E-22 T 23-10-2018 IPR036013 Band 7/SPFH domain superfamily CDG62_07125 597baa7e749b6f6571b47c8d34714091 379 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 46 367 7.1E-47 T 23-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CDG62_07125 597baa7e749b6f6571b47c8d34714091 379 SUPERFAMILY SSF51695 41 372 7.06E-72 T 23-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CDG62_07125 597baa7e749b6f6571b47c8d34714091 379 Gene3D G3DSA:3.20.20.190 40 373 7.4E-108 T 23-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 CDG62_11800 7bd797ca9f08ebaa7eaf9300111e312f 363 Pfam PF00793 DAHP synthetase I family 53 348 2.6E-95 T 23-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDG62_11800 7bd797ca9f08ebaa7eaf9300111e312f 363 Gene3D G3DSA:3.20.20.70 10 359 1.7E-152 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_11800 7bd797ca9f08ebaa7eaf9300111e312f 363 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 15 358 2.9E-153 T 23-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CDG62_11800 7bd797ca9f08ebaa7eaf9300111e312f 363 SUPERFAMILY SSF51569 16 357 1.99E-133 T 23-10-2018 CDG62_11800 7bd797ca9f08ebaa7eaf9300111e312f 363 PIRSF PIRSF001361 3 363 1.3E-158 T 23-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CDG62_18865 957c48ae70a0551c205d31732e559832 290 Gene3D G3DSA:3.90.550.10 1 290 1.2E-76 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_18865 957c48ae70a0551c205d31732e559832 290 SUPERFAMILY SSF53448 2 280 9.91E-55 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_18865 957c48ae70a0551c205d31732e559832 290 Pfam PF00483 Nucleotidyl transferase 6 267 2.3E-21 T 23-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CDG62_18865 957c48ae70a0551c205d31732e559832 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 268 1.8E-104 T 23-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CDG62_12625 981b3e4765fd23c2c9d53f83cd1b8323 133 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 23-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CDG62_12625 981b3e4765fd23c2c9d53f83cd1b8323 133 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 130 3.1E-67 T 23-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CDG62_12625 981b3e4765fd23c2c9d53f83cd1b8323 133 SUPERFAMILY SSF54593 1 127 2.95E-37 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_12625 981b3e4765fd23c2c9d53f83cd1b8323 133 Gene3D G3DSA:3.10.180.10 1 133 3.2E-51 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_12625 981b3e4765fd23c2c9d53f83cd1b8323 133 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 23-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CDG62_12625 981b3e4765fd23c2c9d53f83cd1b8323 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.4E-23 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDG62_16075 c76ab1024e1a66495ede3db3bf80dfda 350 Pfam PF01435 Peptidase family M48 174 341 9.4E-22 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDG62_16855 4747e4d234f4ea0f366ba566731e5257 712 Pfam PF00593 TonB dependent receptor 242 710 2.6E-60 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_16855 4747e4d234f4ea0f366ba566731e5257 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 162 6.0E-27 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_16855 4747e4d234f4ea0f366ba566731e5257 712 Gene3D G3DSA:2.170.130.10 36 167 7.2E-39 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_16855 4747e4d234f4ea0f366ba566731e5257 712 Gene3D G3DSA:2.40.170.20 173 712 4.1E-127 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_16855 4747e4d234f4ea0f366ba566731e5257 712 SUPERFAMILY SSF56935 37 712 1.65E-134 T 23-10-2018 CDG62_03065 8d7cf253976dc6fad1bb75d5fff60c80 434 SUPERFAMILY SSF53335 144 434 5.27E-65 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_03065 8d7cf253976dc6fad1bb75d5fff60c80 434 SUPERFAMILY SSF48013 13 150 1.57E-27 T 23-10-2018 IPR035926 NusB-like superfamily CDG62_03065 8d7cf253976dc6fad1bb75d5fff60c80 434 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 19 433 6.4E-110 T 23-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 CDG62_03065 8d7cf253976dc6fad1bb75d5fff60c80 434 Gene3D G3DSA:3.40.50.150 144 433 3.0E-72 T 23-10-2018 CDG62_03065 8d7cf253976dc6fad1bb75d5fff60c80 434 Pfam PF01189 16S rRNA methyltransferase RsmB/F 242 430 3.0E-52 T 23-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 CDG62_03065 8d7cf253976dc6fad1bb75d5fff60c80 434 Gene3D G3DSA:1.10.940.10 9 143 9.9E-33 T 23-10-2018 IPR035926 NusB-like superfamily CDG62_03065 8d7cf253976dc6fad1bb75d5fff60c80 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 223 237 1.2E-25 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDG62_03065 8d7cf253976dc6fad1bb75d5fff60c80 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 368 384 1.2E-25 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDG62_03065 8d7cf253976dc6fad1bb75d5fff60c80 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 318 330 1.2E-25 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDG62_03065 8d7cf253976dc6fad1bb75d5fff60c80 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 416 433 1.2E-25 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDG62_03065 8d7cf253976dc6fad1bb75d5fff60c80 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 252 262 1.2E-25 T 23-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase CDG62_03065 8d7cf253976dc6fad1bb75d5fff60c80 434 Pfam PF01029 NusB family 14 131 2.5E-19 T 23-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CDG62_16490 9015d849726c043fdfd71e7a0068ba9d 273 SUPERFAMILY SSF53098 3 221 8.02E-32 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_16490 9015d849726c043fdfd71e7a0068ba9d 273 Gene3D G3DSA:3.30.420.10 5 214 5.8E-20 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_16490 9015d849726c043fdfd71e7a0068ba9d 273 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 254 7.8E-72 T 23-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like CDG62_06525 3c5e1d66e904ac6ff4d4175d71614786 243 Gene3D G3DSA:2.40.50.140 1 75 2.7E-14 T 23-10-2018 CDG62_06525 3c5e1d66e904ac6ff4d4175d71614786 243 Pfam PF05901 Excalibur calcium-binding domain 205 238 1.2E-7 T 23-10-2018 IPR008613 Excalibur calcium-binding domain CDG62_06525 3c5e1d66e904ac6ff4d4175d71614786 243 SMART SM00357 4 67 1.0E-8 T 23-10-2018 IPR011129 Cold shock domain GO:0003676 CDG62_06525 3c5e1d66e904ac6ff4d4175d71614786 243 SUPERFAMILY SSF50249 2 66 8.57E-13 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_06525 3c5e1d66e904ac6ff4d4175d71614786 243 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 1.1E-11 T 23-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CDG62_06525 3c5e1d66e904ac6ff4d4175d71614786 243 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 35 - T 23-10-2018 IPR019844 Cold-shock conserved site CDG62_02160 cfcdd4dcb559a7b5bd7c6fa9f53a64a1 287 Pfam PF01464 Transglycosylase SLT domain 150 248 8.5E-8 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 CDG62_02160 cfcdd4dcb559a7b5bd7c6fa9f53a64a1 287 SUPERFAMILY SSF53955 145 259 6.7E-17 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG62_15020 f5d9c460dcc062d08ce81adbb7098716 148 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 144 1.3E-26 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CDG62_15020 f5d9c460dcc062d08ce81adbb7098716 148 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 4 144 27.478 T 23-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 CDG62_15020 f5d9c460dcc062d08ce81adbb7098716 148 Gene3D G3DSA:3.30.420.270 58 137 2.5E-9 T 23-10-2018 CDG62_06280 0821f7feac3fa377da14e5a346536018 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 135 7.6E-23 T 23-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 CDG62_06280 0821f7feac3fa377da14e5a346536018 138 Gene3D G3DSA:3.30.420.270 65 134 6.9E-7 T 23-10-2018 CDG62_10115 f60ff35893932b70196dccd249a696ee 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 28 208 5.5E-48 T 23-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CDG62_10115 f60ff35893932b70196dccd249a696ee 210 SUPERFAMILY SSF53335 8 209 7.19E-34 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_10115 f60ff35893932b70196dccd249a696ee 210 PIRSF PIRSF003078 1 210 5.6E-52 T 23-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CDG62_10115 f60ff35893932b70196dccd249a696ee 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 206 26.469 T 23-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CDG62_10115 f60ff35893932b70196dccd249a696ee 210 Pfam PF02527 rRNA small subunit methyltransferase G 25 204 3.8E-50 T 23-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CDG62_10115 f60ff35893932b70196dccd249a696ee 210 Gene3D G3DSA:3.40.50.150 4 209 5.6E-62 T 23-10-2018 CDG62_16305 6f2c31704c19528269ff8fb6bf07c93f 189 Pfam PF02325 YGGT family 108 177 9.8E-17 T 23-10-2018 IPR003425 CCB3/YggT GO:0016020 CDG62_16305 6f2c31704c19528269ff8fb6bf07c93f 189 Pfam PF02325 YGGT family 11 79 1.7E-5 T 23-10-2018 IPR003425 CCB3/YggT GO:0016020 CDG62_09830 5f489f7979a86b95ebb116c03927b27c 400 ProSitePatterns PS00217 Sugar transport proteins signature 2. 110 135 - T 23-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CDG62_09830 5f489f7979a86b95ebb116c03927b27c 400 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 20 378 6.7E-49 T 23-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB CDG62_09830 5f489f7979a86b95ebb116c03927b27c 400 SUPERFAMILY SSF103473 8 386 8.5E-27 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_09830 5f489f7979a86b95ebb116c03927b27c 400 Gene3D G3DSA:1.20.1250.20 11 398 1.0E-18 T 23-10-2018 CDG62_11650 26ac831068490d76bdb0bc74fc4016d9 93 SUPERFAMILY SSF75169 5 90 1.06E-9 T 23-10-2018 IPR027396 DsrEFH-like CDG62_11650 26ac831068490d76bdb0bc74fc4016d9 93 Pfam PF04077 DsrH like protein 14 87 5.1E-9 T 23-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CDG62_11650 26ac831068490d76bdb0bc74fc4016d9 93 Gene3D G3DSA:3.40.1260.10 4 92 1.2E-8 T 23-10-2018 IPR027396 DsrEFH-like CDG62_13515 d41487e019af975b6f06d95dda1eb69c 337 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 336 8.1E-27 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_13515 d41487e019af975b6f06d95dda1eb69c 337 SUPERFAMILY SSF161098 132 319 1.7E-20 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_13515 d41487e019af975b6f06d95dda1eb69c 337 Gene3D G3DSA:1.10.3720.10 125 337 1.4E-17 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_11205 6ff4ebf9e0b4f179bdd1ab14b54ae967 169 Gene3D G3DSA:3.10.450.50 6 169 4.3E-47 T 23-10-2018 CDG62_11205 6ff4ebf9e0b4f179bdd1ab14b54ae967 169 TIGRFAM TIGR03232 benzo_1_2_benB: benzoate 1,2-dioxygenase, small subunit 15 169 2.6E-90 T 23-10-2018 IPR017641 Benzoate 1,2-dioxygenase, small subunit GO:0055114 CDG62_11205 6ff4ebf9e0b4f179bdd1ab14b54ae967 169 SUPERFAMILY SSF54427 8 169 1.12E-53 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG62_11205 6ff4ebf9e0b4f179bdd1ab14b54ae967 169 Pfam PF00866 Ring hydroxylating beta subunit 21 161 5.3E-47 T 23-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 CDG62_08650 1bafadfa0f5a26c44255ea7ad8d106c1 200 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 3 151 2.7E-10 T 23-10-2018 IPR007296 Domain of unknown function DUF403 CDG62_18025 33dce22a764e9606622c4bc845e4a6d9 236 Pfam PF01203 Type II secretion system (T2SS), protein N 31 197 6.8E-14 T 23-10-2018 IPR022792 Type II secretion system, protein N CDG62_10795 1b83191b54aa18d1ca8a9fd4a46ca349 228 SUPERFAMILY SSF55469 34 227 2.36E-54 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG62_10795 1b83191b54aa18d1ca8a9fd4a46ca349 228 Gene3D G3DSA:3.40.109.10 32 228 5.5E-72 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG62_10795 1b83191b54aa18d1ca8a9fd4a46ca349 228 Pfam PF00881 Nitroreductase family 39 206 1.6E-7 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDG62_05350 33c23803467f3255a0372dbeaeb2e39e 207 SUPERFAMILY SSF56214 22 67 1.14E-9 T 23-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CDG62_05350 33c23803467f3255a0372dbeaeb2e39e 207 Gene3D G3DSA:3.90.470.20 4 98 6.8E-14 T 23-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CDG62_05350 33c23803467f3255a0372dbeaeb2e39e 207 SUPERFAMILY SSF56214 76 181 1.96E-17 T 23-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CDG62_05350 33c23803467f3255a0372dbeaeb2e39e 207 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 77 146 1.4E-11 T 23-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 CDG62_06490 dfa5e270f5ee42f84e14bb512996a1b3 173 Gene3D G3DSA:1.20.120.1200 1 163 4.3E-44 T 23-10-2018 CDG62_06490 dfa5e270f5ee42f84e14bb512996a1b3 173 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 161 1.5E-31 T 23-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_12200 228eff2b52c6731e00a7ee29f3adb9e1 402 Gene3D G3DSA:2.40.420.20 316 384 9.5E-87 T 23-10-2018 CDG62_12200 228eff2b52c6731e00a7ee29f3adb9e1 402 SUPERFAMILY SSF111369 72 310 9.15E-58 T 23-10-2018 CDG62_12200 228eff2b52c6731e00a7ee29f3adb9e1 402 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 58 386 7.5E-74 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG62_12200 228eff2b52c6731e00a7ee29f3adb9e1 402 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 305 2.1E-16 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG62_12200 228eff2b52c6731e00a7ee29f3adb9e1 402 Gene3D G3DSA:2.40.30.170 70 315 9.5E-87 T 23-10-2018 CDG62_12200 228eff2b52c6731e00a7ee29f3adb9e1 402 Gene3D G3DSA:1.10.287.470 117 190 9.5E-87 T 23-10-2018 CDG62_12200 228eff2b52c6731e00a7ee29f3adb9e1 402 Gene3D G3DSA:2.40.50.100 82 226 9.5E-87 T 23-10-2018 CDG62_10130 1d12186a3ae20b7337a4eb42f7ce312c 217 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 186 6.4E-33 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CDG62_04435 8c68669f5c3620dae64e82005ffbfc4c 376 Pfam PF01594 AI-2E family transporter 16 346 4.4E-45 T 23-10-2018 IPR002549 Transmembrane protein TqsA-like CDG62_05170 d63289fcccd1198b5c838a4ec9e8b552 129 Pfam PF07361 Cytochrome b562 26 129 5.4E-20 T 23-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 CDG62_05170 d63289fcccd1198b5c838a4ec9e8b552 129 Gene3D G3DSA:1.20.120.10 25 129 1.4E-29 T 23-10-2018 CDG62_05170 d63289fcccd1198b5c838a4ec9e8b552 129 SUPERFAMILY SSF47175 26 129 1.53E-19 T 23-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 CDG62_02440 a7c2f6f221effdea9f76ad86e2d06012 278 Pfam PF08378 Nuclease-related domain 25 112 2.1E-10 T 23-10-2018 IPR011528 Nuclease-related domain, NERD CDG62_15885 0c7684a6de1216797f55c08afcde800a 90 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 15 88 3.6E-19 T 23-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CDG62_15885 0c7684a6de1216797f55c08afcde800a 90 SUPERFAMILY SSF55229 38 89 5.23E-11 T 23-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 CDG62_15885 0c7684a6de1216797f55c08afcde800a 90 Hamap MF_00262 Cell division topological specificity factor [minE]. 4 90 14.834 T 23-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CDG62_15885 0c7684a6de1216797f55c08afcde800a 90 Gene3D G3DSA:3.30.1070.10 21 88 1.5E-19 T 23-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 CDG62_15885 0c7684a6de1216797f55c08afcde800a 90 Pfam PF03776 Septum formation topological specificity factor MinE 17 87 4.1E-18 T 23-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CDG62_00205 488900f8c9475e6af22f3ca6b0b193aa 159 Pfam PF08774 VRR-NUC domain 64 143 2.5E-10 T 23-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 CDG62_00205 488900f8c9475e6af22f3ca6b0b193aa 159 Gene3D G3DSA:3.40.1350.10 38 158 4.4E-33 T 23-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 CDG62_01835 476affd74ab696d8a273939dd6bf0707 513 Pfam PF04986 Putative transposase 172 396 8.5E-61 T 23-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 CDG62_01835 476affd74ab696d8a273939dd6bf0707 513 Pfam PF14319 Transposase zinc-binding domain 40 143 1.0E-26 T 23-10-2018 IPR026889 Transposase zinc-binding domain CDG62_02360 f6b1810f263f84195568c9f7a9d493c0 220 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 42 204 6.5E-31 T 23-10-2018 IPR021255 Putative auto-transporter adhesin, head GIN domain CDG62_02360 f6b1810f263f84195568c9f7a9d493c0 220 Gene3D G3DSA:2.160.20.120 91 219 4.3E-30 T 23-10-2018 CDG62_02465 93f29d9b3c78866fb46009490992b16a 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 91 4.5E-8 T 23-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CDG62_02465 93f29d9b3c78866fb46009490992b16a 310 Pfam PF00589 Phage integrase family 129 290 4.7E-32 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG62_02465 93f29d9b3c78866fb46009490992b16a 310 Gene3D G3DSA:1.10.150.130 1 110 4.6E-13 T 23-10-2018 IPR010998 Integrase/recombinase, N-terminal CDG62_02465 93f29d9b3c78866fb46009490992b16a 310 Gene3D G3DSA:1.10.443.10 117 298 3.9E-40 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG62_02465 93f29d9b3c78866fb46009490992b16a 310 SUPERFAMILY SSF56349 5 293 5.0E-45 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG62_12025 768a5e724d09803e5a7bf51353020ee5 341 Gene3D G3DSA:3.20.20.70 6 248 1.1E-76 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_12025 768a5e724d09803e5a7bf51353020ee5 341 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 3.7E-120 T 23-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CDG62_12025 768a5e724d09803e5a7bf51353020ee5 341 Pfam PF01207 Dihydrouridine synthase (Dus) 13 313 1.0E-99 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG62_12025 768a5e724d09803e5a7bf51353020ee5 341 PIRSF PIRSF006621 1 327 1.1E-101 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG62_12025 768a5e724d09803e5a7bf51353020ee5 341 SUPERFAMILY SSF51395 10 318 3.85E-89 T 23-10-2018 CDG62_12025 768a5e724d09803e5a7bf51353020ee5 341 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 47.968 T 23-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 CDG62_12025 768a5e724d09803e5a7bf51353020ee5 341 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 23-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG62_12025 768a5e724d09803e5a7bf51353020ee5 341 Gene3D G3DSA:1.10.1200.80 251 325 1.1E-13 T 23-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CDG62_04165 471e6b4d13070cc730d22ae6fdf3a027 268 Pfam PF08241 Methyltransferase domain 88 172 7.7E-12 T 23-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDG62_04165 471e6b4d13070cc730d22ae6fdf3a027 268 Gene3D G3DSA:3.40.50.150 3 268 8.8E-72 T 23-10-2018 CDG62_04165 471e6b4d13070cc730d22ae6fdf3a027 268 PIRSF PIRSF018249 1 268 3.4E-85 T 23-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 CDG62_04165 471e6b4d13070cc730d22ae6fdf3a027 268 SUPERFAMILY SSF53335 6 249 1.05E-39 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_14955 6b40215d84fc3d78409681dd9d613c82 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 187 1.3E-53 T 23-10-2018 IPR006286 Deglycase PfpI CDG62_14955 6b40215d84fc3d78409681dd9d613c82 192 SUPERFAMILY SSF52317 1 186 2.07E-48 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_14955 6b40215d84fc3d78409681dd9d613c82 192 Gene3D G3DSA:3.40.50.880 1 192 1.9E-53 T 23-10-2018 IPR029062 Class I glutamine amidotransferase-like CDG62_14955 6b40215d84fc3d78409681dd9d613c82 192 Pfam PF01965 DJ-1/PfpI family 3 184 6.1E-51 T 23-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 CDG62_18435 965c2264b952c5af7e0d0f51bd8e731e 189 Pfam PF01300 Telomere recombination 12 183 4.2E-33 T 23-10-2018 IPR006070 YrdC-like domain GO:0003725 CDG62_18435 965c2264b952c5af7e0d0f51bd8e731e 189 Gene3D G3DSA:3.90.870.10 1 188 6.0E-52 T 23-10-2018 CDG62_18435 965c2264b952c5af7e0d0f51bd8e731e 189 SUPERFAMILY SSF55821 4 187 1.1E-41 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDG62_18435 965c2264b952c5af7e0d0f51bd8e731e 189 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 3 188 34.645 T 23-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 CDG62_08540 3373f18a12bff34eab5a6ef99c1fd81b 668 Pfam PF12697 Alpha/beta hydrolase family 384 651 2.5E-6 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_08540 3373f18a12bff34eab5a6ef99c1fd81b 668 SUPERFAMILY SSF53474 377 643 5.56E-24 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_08540 3373f18a12bff34eab5a6ef99c1fd81b 668 Gene3D G3DSA:3.40.50.1820 375 640 8.1E-23 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_08715 6334de2142d58f22ae4b62979d81ebba 206 Gene3D G3DSA:1.20.120.80 18 206 1.5E-52 T 23-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08715 6334de2142d58f22ae4b62979d81ebba 206 SUPERFAMILY SSF81452 8 204 1.83E-55 T 23-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_08715 6334de2142d58f22ae4b62979d81ebba 206 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 24 206 1.1E-79 T 23-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 CDG62_08715 6334de2142d58f22ae4b62979d81ebba 206 Pfam PF00510 Cytochrome c oxidase subunit III 16 204 1.2E-14 T 23-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CDG62_14660 b4f3566c39440ee6a7aee18eae1a6051 568 Pfam PF05552 Conserved TM helix 189 234 6.3E-12 T 23-10-2018 IPR008910 Conserved TM helix CDG62_14660 b4f3566c39440ee6a7aee18eae1a6051 568 Pfam PF05552 Conserved TM helix 99 146 1.3E-15 T 23-10-2018 IPR008910 Conserved TM helix CDG62_14660 b4f3566c39440ee6a7aee18eae1a6051 568 Pfam PF05552 Conserved TM helix 280 328 8.5E-13 T 23-10-2018 IPR008910 Conserved TM helix CDG62_11525 51d0e8e0e24f899cdd1a97a250555b5d 513 Gene3D G3DSA:3.30.420.10 149 310 1.7E-8 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_11525 51d0e8e0e24f899cdd1a97a250555b5d 513 Pfam PF00665 Integrase core domain 137 263 8.7E-17 T 23-10-2018 IPR001584 Integrase, catalytic core GO:0015074 CDG62_11525 51d0e8e0e24f899cdd1a97a250555b5d 513 SUPERFAMILY SSF53098 149 299 3.79E-14 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_01480 92b70e0639ad20202f68786fc795a5a8 503 Pfam PF03743 Bacterial conjugation TrbI-like protein 323 496 2.2E-11 T 23-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CDG62_12105 5827302400c70c389e53bf728838a825 364 Pfam PF00487 Fatty acid desaturase 76 340 7.9E-26 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CDG62_03050 cc6e337b03a9b89bec9b9713bdbb1a8e 900 SUPERFAMILY SSF49401 217 331 6.46E-6 T 23-10-2018 IPR008966 Adhesion domain superfamily CDG62_03050 cc6e337b03a9b89bec9b9713bdbb1a8e 900 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 209 259 2.9E-16 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_03050 cc6e337b03a9b89bec9b9713bdbb1a8e 900 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 817 852 4.1E-5 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_03050 cc6e337b03a9b89bec9b9713bdbb1a8e 900 Gene3D G3DSA:2.60.40.740 203 346 2.5E-11 T 23-10-2018 CDG62_03050 cc6e337b03a9b89bec9b9713bdbb1a8e 900 Pfam PF01345 Domain of unknown function DUF11 207 317 1.3E-13 T 23-10-2018 IPR001434 Domain of unknown function DUF11 CDG62_15040 3f6362cbdd64a4f11124fb9094d1332f 308 Gene3D G3DSA:3.30.70.270 132 305 6.5E-27 T 23-10-2018 CDG62_15040 3f6362cbdd64a4f11124fb9094d1332f 308 SUPERFAMILY SSF55073 151 300 2.75E-22 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_15040 3f6362cbdd64a4f11124fb9094d1332f 308 SMART SM00267 134 301 9.0E-13 T 23-10-2018 IPR000160 GGDEF domain CDG62_15040 3f6362cbdd64a4f11124fb9094d1332f 308 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 147 299 2.3E-24 T 23-10-2018 IPR000160 GGDEF domain CDG62_15040 3f6362cbdd64a4f11124fb9094d1332f 308 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 299 3.4E-27 T 23-10-2018 IPR000160 GGDEF domain CDG62_05970 6d645de1f256a6240e8c93847127c6ac 487 PIRSF PIRSF006060 1 485 1.3E-82 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_05970 6d645de1f256a6240e8c93847127c6ac 487 Pfam PF00324 Amino acid permease 18 471 2.0E-133 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG62_05970 6d645de1f256a6240e8c93847127c6ac 487 ProSitePatterns PS00218 Amino acid permeases signature. 43 74 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG62_05970 6d645de1f256a6240e8c93847127c6ac 487 Gene3D G3DSA:1.20.1740.10 9 481 2.5E-62 T 23-10-2018 CDG62_03825 0a6dda985fca60a3b0cf910ca1999247 307 SUPERFAMILY SSF46785 3 112 8.35E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_03825 0a6dda985fca60a3b0cf910ca1999247 307 Gene3D G3DSA:3.40.190.10 165 266 1.8E-45 T 23-10-2018 CDG62_03825 0a6dda985fca60a3b0cf910ca1999247 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.1E-12 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_03825 0a6dda985fca60a3b0cf910ca1999247 307 Gene3D G3DSA:3.40.190.10 91 292 1.8E-45 T 23-10-2018 CDG62_03825 0a6dda985fca60a3b0cf910ca1999247 307 SUPERFAMILY SSF53850 89 298 2.53E-32 T 23-10-2018 CDG62_03825 0a6dda985fca60a3b0cf910ca1999247 307 Pfam PF03466 LysR substrate binding domain 88 294 1.2E-31 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_03825 0a6dda985fca60a3b0cf910ca1999247 307 Gene3D G3DSA:1.10.10.10 3 89 1.1E-21 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_18000 6e93c284a1831a6f663822b90f52b605 497 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 173 3.8E-37 T 23-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG62_18000 6e93c284a1831a6f663822b90f52b605 497 SUPERFAMILY SSF56322 15 490 7.98E-152 T 23-10-2018 IPR005801 ADC synthase GO:0009058 CDG62_18000 6e93c284a1831a6f663822b90f52b605 497 Pfam PF00425 chorismate binding enzyme 221 480 1.1E-91 T 23-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CDG62_18000 6e93c284a1831a6f663822b90f52b605 497 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 488 5.5E-161 T 23-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG62_18000 6e93c284a1831a6f663822b90f52b605 497 Gene3D G3DSA:3.60.120.10 1 494 4.5E-176 T 23-10-2018 IPR005801 ADC synthase GO:0009058 CDG62_18000 6e93c284a1831a6f663822b90f52b605 497 PRINTS PR00095 Anthranilate synthase component I signature 422 436 2.8E-23 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG62_18000 6e93c284a1831a6f663822b90f52b605 497 PRINTS PR00095 Anthranilate synthase component I signature 328 341 2.8E-23 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG62_18000 6e93c284a1831a6f663822b90f52b605 497 PRINTS PR00095 Anthranilate synthase component I signature 437 451 2.8E-23 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG62_18000 6e93c284a1831a6f663822b90f52b605 497 PRINTS PR00095 Anthranilate synthase component I signature 342 355 2.8E-23 T 23-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CDG62_03425 0460846ca56ee6494565551d292e00bf 168 Pfam PF13420 Acetyltransferase (GNAT) domain 5 159 4.1E-23 T 23-10-2018 CDG62_03425 0460846ca56ee6494565551d292e00bf 168 Gene3D G3DSA:3.40.630.30 2 168 1.3E-50 T 23-10-2018 CDG62_03425 0460846ca56ee6494565551d292e00bf 168 SUPERFAMILY SSF55729 5 167 8.81E-35 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_17125 7d40327531df4a26d48cd4640ea7626c 265 Gene3D G3DSA:3.30.70.580 1 106 1.8E-34 T 23-10-2018 CDG62_17125 7d40327531df4a26d48cd4640ea7626c 265 Gene3D G3DSA:3.30.70.660 107 244 2.0E-48 T 23-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 CDG62_17125 7d40327531df4a26d48cd4640ea7626c 265 Pfam PF01416 tRNA pseudouridine synthase 9 104 1.3E-7 T 23-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_17125 7d40327531df4a26d48cd4640ea7626c 265 Pfam PF01416 tRNA pseudouridine synthase 144 246 1.7E-29 T 23-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_17125 7d40327531df4a26d48cd4640ea7626c 265 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 33.353 T 23-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_17125 7d40327531df4a26d48cd4640ea7626c 265 PIRSF PIRSF001430 1 257 2.2E-76 T 23-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_17125 7d40327531df4a26d48cd4640ea7626c 265 SUPERFAMILY SSF55120 1 260 6.91E-86 T 23-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_17125 7d40327531df4a26d48cd4640ea7626c 265 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 239 9.3E-65 T 23-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CDG62_16190 5d3e37f54e3376c5965e8a8c69442f12 110 Gene3D G3DSA:3.30.160.100 2 101 5.5E-26 T 23-10-2018 IPR036567 Ribosome hibernation promotion factor-like CDG62_16190 5d3e37f54e3376c5965e8a8c69442f12 110 SUPERFAMILY SSF69754 1 102 1.83E-23 T 23-10-2018 IPR036567 Ribosome hibernation promotion factor-like CDG62_16190 5d3e37f54e3376c5965e8a8c69442f12 110 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 105 1.6E-21 T 23-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CDG62_16190 5d3e37f54e3376c5965e8a8c69442f12 110 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 100 3.0E-18 T 23-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CDG62_04450 a5ae3b5dc8bcde91723e6045e1afb7f6 214 SUPERFAMILY SSF53335 36 206 6.04E-31 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_04450 a5ae3b5dc8bcde91723e6045e1afb7f6 214 Gene3D G3DSA:3.40.50.150 16 199 5.2E-27 T 23-10-2018 CDG62_04450 a5ae3b5dc8bcde91723e6045e1afb7f6 214 Pfam PF08241 Methyltransferase domain 40 132 9.9E-19 T 23-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 CDG62_17715 f9a3bba35eed47203c548d1f3b72f320 199 SUPERFAMILY SSF52540 1 194 2.28E-38 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17715 f9a3bba35eed47203c548d1f3b72f320 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 186 1.6E-53 T 23-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CDG62_17715 f9a3bba35eed47203c548d1f3b72f320 199 Gene3D G3DSA:3.40.50.300 1 199 4.4E-65 T 23-10-2018 CDG62_17715 f9a3bba35eed47203c548d1f3b72f320 199 Pfam PF01121 Dephospho-CoA kinase 4 179 2.6E-63 T 23-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CDG62_17715 f9a3bba35eed47203c548d1f3b72f320 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 26.172 T 23-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CDG62_08950 d7ab8c340760ee1db31cb87f7a1daefe 264 Gene3D G3DSA:3.90.230.10 4 256 7.4E-104 T 23-10-2018 CDG62_08950 d7ab8c340760ee1db31cb87f7a1daefe 264 Hamap MF_01974 Methionine aminopeptidase [map]. 6 254 40.029 T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG62_08950 d7ab8c340760ee1db31cb87f7a1daefe 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 7 252 7.2E-94 T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG62_08950 d7ab8c340760ee1db31cb87f7a1daefe 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 5.1E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG62_08950 d7ab8c340760ee1db31cb87f7a1daefe 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 72 85 5.1E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG62_08950 d7ab8c340760ee1db31cb87f7a1daefe 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 5.1E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG62_08950 d7ab8c340760ee1db31cb87f7a1daefe 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 5.1E-22 T 23-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG62_08950 d7ab8c340760ee1db31cb87f7a1daefe 264 Pfam PF00557 Metallopeptidase family M24 15 245 3.1E-51 T 23-10-2018 IPR000994 Peptidase M24 CDG62_08950 d7ab8c340760ee1db31cb87f7a1daefe 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 171 189 - T 23-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CDG62_08950 d7ab8c340760ee1db31cb87f7a1daefe 264 SUPERFAMILY SSF55920 7 257 7.98E-90 T 23-10-2018 IPR036005 Creatinase/aminopeptidase-like CDG62_09520 8c21ba63b46eb765bc38f729ce7f6474 62 Gene3D G3DSA:1.10.260.40 1 60 9.3E-9 T 23-10-2018 CDG62_09520 8c21ba63b46eb765bc38f729ce7f6474 62 SUPERFAMILY SSF47413 1 56 2.62E-7 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG62_12665 44666606ea7edef3bdf0d005b0097908 459 SUPERFAMILY SSF161098 203 446 3.01E-33 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_12665 44666606ea7edef3bdf0d005b0097908 459 Pfam PF12501 Phosphate ATP-binding cassette transporter 8 180 1.1E-36 T 23-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 CDG62_12665 44666606ea7edef3bdf0d005b0097908 459 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 249 455 1.3E-16 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_12665 44666606ea7edef3bdf0d005b0097908 459 Gene3D G3DSA:1.10.3720.10 224 457 1.6E-35 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_12665 44666606ea7edef3bdf0d005b0097908 459 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 164 454 1.0E-85 T 23-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CDG62_12120 2d518fcc2651a2fb27faf28f2b1fa707 271 Gene3D G3DSA:3.40.50.1820 1 271 6.9E-39 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_12120 2d518fcc2651a2fb27faf28f2b1fa707 271 Pfam PF12697 Alpha/beta hydrolase family 45 258 2.2E-11 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_12120 2d518fcc2651a2fb27faf28f2b1fa707 271 SUPERFAMILY SSF53474 2 265 6.49E-23 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_04025 7d15b7611e3cb1658ddc742fdddab916 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 41.041 T 23-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CDG62_04025 7d15b7611e3cb1658ddc742fdddab916 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 3.6E-63 T 23-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CDG62_04025 7d15b7611e3cb1658ddc742fdddab916 197 Gene3D G3DSA:3.30.230.40 92 197 2.0E-37 T 23-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 CDG62_04025 7d15b7611e3cb1658ddc742fdddab916 197 Gene3D G3DSA:3.30.230.40 1 91 4.9E-38 T 23-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 CDG62_04025 7d15b7611e3cb1658ddc742fdddab916 197 SUPERFAMILY SSF54211 4 88 3.54E-33 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_04025 7d15b7611e3cb1658ddc742fdddab916 197 SUPERFAMILY SSF54211 90 180 3.54E-34 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_04025 7d15b7611e3cb1658ddc742fdddab916 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 23-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CDG62_04025 7d15b7611e3cb1658ddc742fdddab916 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 23-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CDG62_08775 1627875b1b61c634177119215c65084b 272 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 22 266 2.1E-83 T 23-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CDG62_08775 1627875b1b61c634177119215c65084b 272 SUPERFAMILY SSF53335 13 268 5.24E-53 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_08775 1627875b1b61c634177119215c65084b 272 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 270 39.305 T 23-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CDG62_08775 1627875b1b61c634177119215c65084b 272 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 177 183 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG62_08775 1627875b1b61c634177119215c65084b 272 Pfam PF05175 Methyltransferase small domain 92 191 3.3E-15 T 23-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CDG62_08775 1627875b1b61c634177119215c65084b 272 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 271 5.9E-68 T 23-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CDG62_08775 1627875b1b61c634177119215c65084b 272 Gene3D G3DSA:1.10.8.10 2 81 2.2E-15 T 23-10-2018 CDG62_08775 1627875b1b61c634177119215c65084b 272 Gene3D G3DSA:3.40.50.150 82 271 1.7E-55 T 23-10-2018 CDG62_17750 fb0fb25cd1341aab8a10af23f66361a4 335 Gene3D G3DSA:1.10.287.470 82 108 2.0E-12 T 23-10-2018 CDG62_17750 fb0fb25cd1341aab8a10af23f66361a4 335 Gene3D G3DSA:2.40.30.170 213 335 1.6E-23 T 23-10-2018 CDG62_17750 fb0fb25cd1341aab8a10af23f66361a4 335 Gene3D G3DSA:2.40.50.100 49 81 2.0E-12 T 23-10-2018 CDG62_17750 fb0fb25cd1341aab8a10af23f66361a4 335 SUPERFAMILY SSF111369 48 109 4.18E-9 T 23-10-2018 CDG62_17750 fb0fb25cd1341aab8a10af23f66361a4 335 SUPERFAMILY SSF111369 113 249 1.18E-7 T 23-10-2018 CDG62_17750 fb0fb25cd1341aab8a10af23f66361a4 335 Pfam PF13533 Biotin-lipoyl like 48 96 2.6E-14 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDG62_17750 fb0fb25cd1341aab8a10af23f66361a4 335 Gene3D G3DSA:1.10.287.470 109 174 1.2E-8 T 23-10-2018 CDG62_17750 fb0fb25cd1341aab8a10af23f66361a4 335 Pfam PF13437 HlyD family secretion protein 200 282 6.4E-9 T 23-10-2018 CDG62_05430 b7f99f4e80557008fb1a50d92a68bbee 257 SUPERFAMILY SSF53448 21 256 1.66E-24 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_03460 a0d282c3093409b9ac10cee5e5f3591b 385 Gene3D G3DSA:3.30.70.270 190 363 6.6E-54 T 23-10-2018 CDG62_03460 a0d282c3093409b9ac10cee5e5f3591b 385 SUPERFAMILY SSF55073 208 362 1.02E-43 T 23-10-2018 IPR029787 Nucleotide cyclase CDG62_03460 a0d282c3093409b9ac10cee5e5f3591b 385 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 199 360 1.5E-47 T 23-10-2018 IPR000160 GGDEF domain CDG62_03460 a0d282c3093409b9ac10cee5e5f3591b 385 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 358 4.8E-46 T 23-10-2018 IPR000160 GGDEF domain CDG62_03460 a0d282c3093409b9ac10cee5e5f3591b 385 SMART SM00267 192 362 1.1E-55 T 23-10-2018 IPR000160 GGDEF domain CDG62_17035 f56fe097f975f05c79a2e91c3f2ca75e 662 SUPERFAMILY SSF52540 6 603 2.42E-123 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17035 f56fe097f975f05c79a2e91c3f2ca75e 662 Gene3D G3DSA:3.40.50.300 284 624 8.8E-66 T 23-10-2018 CDG62_17035 f56fe097f975f05c79a2e91c3f2ca75e 662 Pfam PF13361 UvrD-like helicase C-terminal domain 281 600 1.3E-42 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDG62_17035 f56fe097f975f05c79a2e91c3f2ca75e 662 Gene3D G3DSA:1.10.486.10 386 530 8.8E-66 T 23-10-2018 CDG62_17035 f56fe097f975f05c79a2e91c3f2ca75e 662 Gene3D G3DSA:3.40.50.300 10 275 7.2E-71 T 23-10-2018 CDG62_17035 f56fe097f975f05c79a2e91c3f2ca75e 662 Gene3D G3DSA:1.10.10.160 109 193 7.2E-71 T 23-10-2018 IPR013986 DExx box DNA helicase domain superfamily CDG62_17035 f56fe097f975f05c79a2e91c3f2ca75e 662 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 274 3.2E-55 T 23-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CDG62_08150 5d607c5089b6107cb12640ad01ca9ca6 257 Gene3D G3DSA:1.10.1040.20 156 256 2.0E-34 T 23-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily CDG62_08150 5d607c5089b6107cb12640ad01ca9ca6 257 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 89 3.8E-10 T 23-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CDG62_08150 5d607c5089b6107cb12640ad01ca9ca6 257 SUPERFAMILY SSF48179 159 255 2.04E-23 T 23-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 CDG62_08150 5d607c5089b6107cb12640ad01ca9ca6 257 Pfam PF10728 Domain of unknown function (DUF2520) 126 251 2.4E-29 T 23-10-2018 IPR018931 Domain of unknown function DUF2520 CDG62_08150 5d607c5089b6107cb12640ad01ca9ca6 257 SUPERFAMILY SSF51735 2 156 5.78E-31 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_08150 5d607c5089b6107cb12640ad01ca9ca6 257 Gene3D G3DSA:3.40.50.720 1 155 4.8E-43 T 23-10-2018 CDG62_02645 a6bcb136b4ca8025cef85a66653062dc 421 Gene3D G3DSA:1.20.1720.10 15 391 8.2E-79 T 23-10-2018 CDG62_02645 a6bcb136b4ca8025cef85a66653062dc 421 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 390 1.6E-123 T 23-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 CDG62_02645 a6bcb136b4ca8025cef85a66653062dc 421 SUPERFAMILY SSF103473 12 404 1.31E-59 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_02645 a6bcb136b4ca8025cef85a66653062dc 421 Pfam PF07690 Major Facilitator Superfamily 25 359 1.0E-40 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_02645 a6bcb136b4ca8025cef85a66653062dc 421 PRINTS PR01035 Tetracycline resistance protein signature 25 41 2.3E-5 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_02645 a6bcb136b4ca8025cef85a66653062dc 421 PRINTS PR01035 Tetracycline resistance protein signature 141 163 2.3E-5 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_02645 a6bcb136b4ca8025cef85a66653062dc 421 PRINTS PR01035 Tetracycline resistance protein signature 278 299 2.3E-5 T 23-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CDG62_08910 e269a54789e26f5b5921f9dea14c96b1 407 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 3 403 6.4E-148 T 23-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CDG62_08910 e269a54789e26f5b5921f9dea14c96b1 407 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 3 406 24.575 T 23-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CDG62_08910 e269a54789e26f5b5921f9dea14c96b1 407 Pfam PF03616 Sodium/glutamate symporter 3 375 1.9E-136 T 23-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CDG62_17625 f1fc151f6f4f565c6d11404a80288e9a 602 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 394 420 6.3E-7 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_17625 f1fc151f6f4f565c6d11404a80288e9a 602 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 251 275 6.3E-7 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_17625 f1fc151f6f4f565c6d11404a80288e9a 602 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 148 167 6.3E-7 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_17625 f1fc151f6f4f565c6d11404a80288e9a 602 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 178 202 6.3E-7 T 23-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_17625 f1fc151f6f4f565c6d11404a80288e9a 602 Pfam PF00361 Proton-conducting membrane transporter 143 431 8.3E-38 T 23-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CDG62_13565 d7a094751bd70f86c1e86207bf5a9cd3 281 PIRSF PIRSF005917 1 278 8.4E-100 T 23-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CDG62_13565 d7a094751bd70f86c1e86207bf5a9cd3 281 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 82 93 - T 23-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 CDG62_13565 d7a094751bd70f86c1e86207bf5a9cd3 281 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 204 1.9E-31 T 23-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 CDG62_13565 d7a094751bd70f86c1e86207bf5a9cd3 281 Gene3D G3DSA:3.30.950.10 112 232 4.0E-38 T 23-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 CDG62_13565 d7a094751bd70f86c1e86207bf5a9cd3 281 Gene3D G3DSA:3.40.1010.10 1 111 1.5E-45 T 23-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 CDG62_13565 d7a094751bd70f86c1e86207bf5a9cd3 281 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 5 273 9.3E-85 T 23-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CDG62_13565 d7a094751bd70f86c1e86207bf5a9cd3 281 SUPERFAMILY SSF53790 4 223 1.44E-80 T 23-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 CDG62_13565 d7a094751bd70f86c1e86207bf5a9cd3 281 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 4 225 36.461 T 23-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 CDG62_15375 e2f859588e06b8e82f5fea25cae2ad03 226 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 3 208 4.7E-33 T 23-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 CDG62_15375 e2f859588e06b8e82f5fea25cae2ad03 226 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 3 210 7.2E-50 T 23-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 CDG62_15375 e2f859588e06b8e82f5fea25cae2ad03 226 SUPERFAMILY SSF81301 107 176 6.54E-5 T 23-10-2018 CDG62_10380 797a94acfa9b0e448ba390fd5445713a 505 SUPERFAMILY SSF53901 361 505 9.26E-29 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_10380 797a94acfa9b0e448ba390fd5445713a 505 Gene3D G3DSA:3.40.47.10 78 505 9.7E-102 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_10380 797a94acfa9b0e448ba390fd5445713a 505 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 90 504 4.1E-116 T 23-10-2018 IPR002155 Thiolase GO:0016747 CDG62_10380 797a94acfa9b0e448ba390fd5445713a 505 Pfam PF00108 Thiolase, N-terminal domain 88 355 6.8E-49 T 23-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 CDG62_10380 797a94acfa9b0e448ba390fd5445713a 505 SUPERFAMILY SSF53901 88 361 1.48E-56 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_10380 797a94acfa9b0e448ba390fd5445713a 505 Pfam PF02803 Thiolase, C-terminal domain 381 505 9.2E-30 T 23-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 CDG62_04620 c7ee207504d9e921c1a0b5ea09c12cf7 271 Pfam PF01370 NAD dependent epimerase/dehydratase family 14 162 5.7E-8 T 23-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDG62_04620 c7ee207504d9e921c1a0b5ea09c12cf7 271 SUPERFAMILY SSF51735 7 255 4.2E-25 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_04620 c7ee207504d9e921c1a0b5ea09c12cf7 271 Gene3D G3DSA:3.40.50.720 1 271 4.5E-59 T 23-10-2018 CDG62_14605 aedb8995460e3ab0148afe62ece4a8f7 325 SUPERFAMILY SSF56281 35 309 1.7E-47 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_14605 aedb8995460e3ab0148afe62ece4a8f7 325 SMART SM00849 91 299 6.2E-24 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_14605 aedb8995460e3ab0148afe62ece4a8f7 325 Gene3D G3DSA:3.60.15.10 35 325 5.5E-118 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_14605 aedb8995460e3ab0148afe62ece4a8f7 325 Pfam PF00753 Metallo-beta-lactamase superfamily 90 279 1.6E-19 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_17055 734d24efa5b64df60d8d6b9d9f337638 142 Pfam PF00293 NUDIX domain 8 129 2.7E-17 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG62_17055 734d24efa5b64df60d8d6b9d9f337638 142 SUPERFAMILY SSF55811 5 136 9.21E-23 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG62_17055 734d24efa5b64df60d8d6b9d9f337638 142 Gene3D G3DSA:3.90.79.10 5 136 1.4E-23 T 23-10-2018 CDG62_15425 f32d039cc578060244b5c770e208d771 63 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 61 1.3E-11 T 23-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDG62_15425 f32d039cc578060244b5c770e208d771 63 SUPERFAMILY SSF143120 1 58 3.14E-11 T 23-10-2018 IPR036165 YefM-like superfamily CDG62_15425 f32d039cc578060244b5c770e208d771 63 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 50 4.2E-12 T 23-10-2018 CDG62_15425 f32d039cc578060244b5c770e208d771 63 Gene3D G3DSA:3.40.1620.10 1 49 1.8E-24 T 23-10-2018 CDG62_15800 e76585be3a2af8f4cec140cdb59704fd 345 Pfam PF00437 Type II/IV secretion system protein 11 269 2.0E-46 T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG62_15800 e76585be3a2af8f4cec140cdb59704fd 345 SUPERFAMILY SSF52540 5 334 6.98E-72 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_15800 e76585be3a2af8f4cec140cdb59704fd 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 23-10-2018 IPR001482 Type II/IV secretion system protein CDG62_15800 e76585be3a2af8f4cec140cdb59704fd 345 Gene3D G3DSA:3.40.50.300 101 345 5.4E-107 T 23-10-2018 CDG62_15800 e76585be3a2af8f4cec140cdb59704fd 345 SMART SM00382 122 247 0.0015 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_15800 e76585be3a2af8f4cec140cdb59704fd 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 6.3E-156 T 23-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 CDG62_15800 e76585be3a2af8f4cec140cdb59704fd 345 Gene3D G3DSA:3.30.450.90 1 100 7.4E-37 T 23-10-2018 CDG62_18660 f1472834496927eae60eb084c6ac37d5 197 Pfam PF01810 LysE type translocator 13 187 1.6E-6 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_18075 b47a819735facd4f639d0ef1101c2908 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 25.268 T 23-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CDG62_18075 b47a819735facd4f639d0ef1101c2908 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 2.1E-36 T 23-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CDG62_18075 b47a819735facd4f639d0ef1101c2908 90 Gene3D G3DSA:1.10.3880.10 1 90 6.1E-32 T 23-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 CDG62_18075 b47a819735facd4f639d0ef1101c2908 90 SUPERFAMILY SSF111148 1 86 6.8E-34 T 23-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 CDG62_18075 b47a819735facd4f639d0ef1101c2908 90 PIRSF PIRSF029827 1 90 2.3E-36 T 23-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CDG62_18075 b47a819735facd4f639d0ef1101c2908 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 73 5.0E-32 T 23-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CDG62_12495 50e4d550d65472b89c80b96bc6fd20ae 213 Gene3D G3DSA:2.40.30.130 1 80 4.3E-17 T 23-10-2018 CDG62_12495 50e4d550d65472b89c80b96bc6fd20ae 213 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 166 194 3.0E-6 T 23-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 CDG62_12495 50e4d550d65472b89c80b96bc6fd20ae 213 Gene3D G3DSA:3.30.980.10 84 213 1.1E-17 T 23-10-2018 CDG62_12495 50e4d550d65472b89c80b96bc6fd20ae 213 SUPERFAMILY SSF50447 1 73 1.06E-13 T 23-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily CDG62_12495 50e4d550d65472b89c80b96bc6fd20ae 213 SUPERFAMILY SSF55186 84 201 6.93E-25 T 23-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 CDG62_14150 3e6bcc6f5023f734a10aef1d76ed0666 829 Pfam PF02687 FtsX-like permease family 731 818 4.2E-7 T 23-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDG62_14150 3e6bcc6f5023f734a10aef1d76ed0666 829 Pfam PF02687 FtsX-like permease family 294 389 1.2E-5 T 23-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CDG62_11400 024fbd2e6d5262eea42ec9612d0e3648 353 SUPERFAMILY SSF51569 18 346 2.29E-111 T 23-10-2018 CDG62_11400 024fbd2e6d5262eea42ec9612d0e3648 353 PIRSF PIRSF001361 2 351 2.7E-134 T 23-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CDG62_11400 024fbd2e6d5262eea42ec9612d0e3648 353 Pfam PF00793 DAHP synthetase I family 44 336 6.2E-79 T 23-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDG62_11400 024fbd2e6d5262eea42ec9612d0e3648 353 Gene3D G3DSA:3.20.20.70 6 348 3.2E-134 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_11400 024fbd2e6d5262eea42ec9612d0e3648 353 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 15 345 1.9E-123 T 23-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CDG62_09435 c223cefd61ad7a27db7bcc317d3f7874 436 SUPERFAMILY SSF56601 4 276 4.54E-68 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG62_09435 c223cefd61ad7a27db7bcc317d3f7874 436 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 244 1.3E-61 T 23-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CDG62_09435 c223cefd61ad7a27db7bcc317d3f7874 436 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 5.3E-16 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG62_09435 c223cefd61ad7a27db7bcc317d3f7874 436 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 5.3E-16 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG62_09435 c223cefd61ad7a27db7bcc317d3f7874 436 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 5.3E-16 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG62_09435 c223cefd61ad7a27db7bcc317d3f7874 436 Gene3D G3DSA:3.40.710.10 16 279 1.3E-78 T 23-10-2018 CDG62_07435 2604e79cabccdd6b7fb273510fa2c6d1 201 SUPERFAMILY SSF55729 7 161 1.22E-41 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_07435 2604e79cabccdd6b7fb273510fa2c6d1 201 Pfam PF13302 Acetyltransferase (GNAT) domain 13 154 6.3E-34 T 23-10-2018 IPR000182 GNAT domain CDG62_07435 2604e79cabccdd6b7fb273510fa2c6d1 201 Gene3D G3DSA:3.40.630.30 2 167 1.4E-45 T 23-10-2018 CDG62_18985 47a5ccd6e60c13ff3c5f61ef3a4a9b8c 205 Gene3D G3DSA:3.40.30.10 24 205 1.2E-53 T 23-10-2018 CDG62_18985 47a5ccd6e60c13ff3c5f61ef3a4a9b8c 205 PIRSF PIRSF001488 1 205 1.5E-50 T 23-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CDG62_18985 47a5ccd6e60c13ff3c5f61ef3a4a9b8c 205 Pfam PF01323 DSBA-like thioredoxin domain 48 187 1.3E-13 T 23-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CDG62_18985 47a5ccd6e60c13ff3c5f61ef3a4a9b8c 205 SUPERFAMILY SSF52833 24 198 1.29E-41 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_14615 cfd39ad30ebdfe79c5a018fba8c78c6e 539 Gene3D G3DSA:3.50.50.60 1 133 3.1E-35 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14615 cfd39ad30ebdfe79c5a018fba8c78c6e 539 Gene3D G3DSA:3.50.50.60 150 359 1.2E-41 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14615 cfd39ad30ebdfe79c5a018fba8c78c6e 539 Gene3D G3DSA:3.50.50.60 441 525 6.6E-26 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14615 cfd39ad30ebdfe79c5a018fba8c78c6e 539 SUPERFAMILY SSF51905 16 248 1.38E-12 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14615 cfd39ad30ebdfe79c5a018fba8c78c6e 539 Pfam PF06100 MCRA family 14 508 3.3E-191 T 23-10-2018 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 CDG62_10510 e60a4370707ad2836d0183de8cb78a59 239 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 227 3.9E-72 T 23-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CDG62_10510 e60a4370707ad2836d0183de8cb78a59 239 SUPERFAMILY SSF56300 2 214 8.02E-25 T 23-10-2018 CDG62_10510 e60a4370707ad2836d0183de8cb78a59 239 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 235 88.877 T 23-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CDG62_10510 e60a4370707ad2836d0183de8cb78a59 239 Pfam PF00149 Calcineurin-like phosphoesterase 3 196 1.6E-8 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDG62_16110 9d8e7d1e9dde50a0e3319c6b7364f465 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 123 4.4E-10 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_16110 9d8e7d1e9dde50a0e3319c6b7364f465 176 Gene3D G3DSA:2.160.10.10 1 172 5.3E-63 T 23-10-2018 CDG62_16110 9d8e7d1e9dde50a0e3319c6b7364f465 176 SUPERFAMILY SSF51161 19 170 1.22E-45 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG62_18705 349a1bd84b22cae4e6d07ee7defb4f7c 406 SUPERFAMILY SSF53901 1 251 4.19E-56 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_18705 349a1bd84b22cae4e6d07ee7defb4f7c 406 Gene3D G3DSA:3.40.47.10 260 406 4.3E-46 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_18705 349a1bd84b22cae4e6d07ee7defb4f7c 406 SMART SM00825 Beta-ketoacyl synthase 4 406 4.2E-13 T 23-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDG62_18705 349a1bd84b22cae4e6d07ee7defb4f7c 406 Gene3D G3DSA:3.40.47.10 1 254 2.3E-63 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_18705 349a1bd84b22cae4e6d07ee7defb4f7c 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 246 7.9E-42 T 23-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CDG62_18705 349a1bd84b22cae4e6d07ee7defb4f7c 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 23-10-2018 IPR018201 Beta-ketoacyl synthase, active site CDG62_18705 349a1bd84b22cae4e6d07ee7defb4f7c 406 SUPERFAMILY SSF53901 215 405 7.13E-62 T 23-10-2018 IPR016039 Thiolase-like GO:0003824 CDG62_18705 349a1bd84b22cae4e6d07ee7defb4f7c 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 362 1.6E-31 T 23-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CDG62_03620 b32793f24698766c41bbee3d75801f88 258 Pfam PF16956 Putative general bacterial porin 1 148 4.4E-16 T 23-10-2018 IPR031593 Putative general bacterial porin CDG62_03620 b32793f24698766c41bbee3d75801f88 258 SUPERFAMILY SSF56935 41 258 2.88E-8 T 23-10-2018 CDG62_10120 dd499d70e56162571e2d8a560d939875 260 Gene3D G3DSA:3.40.50.300 1 259 3.2E-80 T 23-10-2018 CDG62_10120 dd499d70e56162571e2d8a560d939875 260 SUPERFAMILY SSF52540 1 252 1.66E-64 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10120 dd499d70e56162571e2d8a560d939875 260 PIRSF PIRSF009320 2 84 1.1E-15 T 23-10-2018 CDG62_10120 dd499d70e56162571e2d8a560d939875 260 PIRSF PIRSF009320 85 260 5.9E-10 T 23-10-2018 CDG62_10120 dd499d70e56162571e2d8a560d939875 260 Pfam PF13614 AAA domain 3 177 3.3E-60 T 23-10-2018 IPR025669 AAA domain CDG62_11840 8c34b4a2734dc66f5ccac86c74f17489 190 SMART SM00563 30 146 5.4E-16 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_11840 8c34b4a2734dc66f5ccac86c74f17489 190 SUPERFAMILY SSF69593 19 143 2.35E-15 T 23-10-2018 CDG62_11840 8c34b4a2734dc66f5ccac86c74f17489 190 Pfam PF01553 Acyltransferase 21 139 2.5E-13 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_02720 fb2606fbb461c234c28b241ebb7fa0c5 320 Pfam PF13936 Helix-turn-helix domain 3 46 7.4E-15 T 23-10-2018 IPR025246 Transposase IS30-like HTH domain CDG62_02720 fb2606fbb461c234c28b241ebb7fa0c5 320 Gene3D G3DSA:3.30.420.10 169 319 1.2E-8 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_02720 fb2606fbb461c234c28b241ebb7fa0c5 320 SUPERFAMILY SSF46689 6 113 6.27E-5 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_02720 fb2606fbb461c234c28b241ebb7fa0c5 320 SUPERFAMILY SSF53098 171 315 4.55E-20 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_18005 95ab1799d6fb22b9f7a43719d57f719a 222 Gene3D G3DSA:3.40.50.1000 12 216 1.6E-58 T 23-10-2018 IPR023214 HAD superfamily CDG62_18005 95ab1799d6fb22b9f7a43719d57f719a 222 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 13 220 9.8E-53 T 23-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CDG62_18005 95ab1799d6fb22b9f7a43719d57f719a 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 111 189 3.7E-9 T 23-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 CDG62_18005 95ab1799d6fb22b9f7a43719d57f719a 222 Gene3D G3DSA:1.10.150.240 24 94 1.6E-58 T 23-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CDG62_18005 95ab1799d6fb22b9f7a43719d57f719a 222 SUPERFAMILY SSF56784 9 221 2.8E-54 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_18005 95ab1799d6fb22b9f7a43719d57f719a 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 195 1.3E-32 T 23-10-2018 CDG62_06160 6397ed8131a2fc527fea7bbaede401cd 311 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 23-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG62_06160 6397ed8131a2fc527fea7bbaede401cd 311 SUPERFAMILY SSF51395 2 302 1.52E-66 T 23-10-2018 CDG62_06160 6397ed8131a2fc527fea7bbaede401cd 311 Gene3D G3DSA:3.20.20.70 1 241 6.2E-74 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_06160 6397ed8131a2fc527fea7bbaede401cd 311 Pfam PF01207 Dihydrouridine synthase (Dus) 4 245 2.8E-69 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG62_06160 6397ed8131a2fc527fea7bbaede401cd 311 PIRSF PIRSF006621 1 311 5.3E-77 T 23-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CDG62_06160 6397ed8131a2fc527fea7bbaede401cd 311 Gene3D G3DSA:1.20.225.30 244 310 4.5E-9 T 23-10-2018 CDG62_06160 6397ed8131a2fc527fea7bbaede401cd 311 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 309 49.728 T 23-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 CDG62_04800 ca856236dc39419630b3c2e5826989ea 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 8.4E-21 T 23-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04800 ca856236dc39419630b3c2e5826989ea 38 Pfam PF00444 Ribosomal protein L36 1 38 2.5E-19 T 23-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04800 ca856236dc39419630b3c2e5826989ea 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 23-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04800 ca856236dc39419630b3c2e5826989ea 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 4.0E-10 T 23-10-2018 CDG62_04800 ca856236dc39419630b3c2e5826989ea 38 SUPERFAMILY SSF57840 1 38 1.11E-16 T 23-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04800 ca856236dc39419630b3c2e5826989ea 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.47 T 23-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04300 8112230cf8772fbda923646ba47a8755 166 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 28 8.7E-6 T 23-10-2018 IPR012902 Prokaryotic N-terminal methylation site CDG62_04300 8112230cf8772fbda923646ba47a8755 166 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 7 134 8.6E-28 T 23-10-2018 IPR013362 Pilus modification type IV, PilV CDG62_09915 7cde5e86a9e42520accf6c2493c6b279 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.4E-14 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_09915 7cde5e86a9e42520accf6c2493c6b279 286 Gene3D G3DSA:1.10.10.10 1 88 3.2E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_09915 7cde5e86a9e42520accf6c2493c6b279 286 SUPERFAMILY SSF53850 86 282 1.9E-35 T 23-10-2018 CDG62_09915 7cde5e86a9e42520accf6c2493c6b279 286 Gene3D G3DSA:3.40.190.10 162 261 3.0E-31 T 23-10-2018 CDG62_09915 7cde5e86a9e42520accf6c2493c6b279 286 Gene3D G3DSA:3.40.190.10 89 269 3.0E-31 T 23-10-2018 CDG62_09915 7cde5e86a9e42520accf6c2493c6b279 286 SUPERFAMILY SSF46785 1 109 8.71E-19 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_09915 7cde5e86a9e42520accf6c2493c6b279 286 Pfam PF03466 LysR substrate binding domain 85 284 2.1E-37 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_16375 f801c3dac3405610c08ded36bb4f0557 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.0 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_16375 f801c3dac3405610c08ded36bb4f0557 119 Gene3D G3DSA:1.10.720.90 2 55 2.1E-23 T 23-10-2018 CDG62_16375 f801c3dac3405610c08ded36bb4f0557 119 Gene3D G3DSA:1.10.1900.20 56 119 2.2E-24 T 23-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_16375 f801c3dac3405610c08ded36bb4f0557 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.6E-45 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_16375 f801c3dac3405610c08ded36bb4f0557 119 Pfam PF00453 Ribosomal protein L20 3 109 1.9E-45 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_16375 f801c3dac3405610c08ded36bb4f0557 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.1E-38 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_16375 f801c3dac3405610c08ded36bb4f0557 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.1E-38 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_16375 f801c3dac3405610c08ded36bb4f0557 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.1E-38 T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_16375 f801c3dac3405610c08ded36bb4f0557 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_16375 f801c3dac3405610c08ded36bb4f0557 119 SUPERFAMILY SSF74731 3 117 2.62E-46 T 23-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_16375 f801c3dac3405610c08ded36bb4f0557 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-21 T 23-10-2018 CDG62_11440 e42ef9ba3cb3117931142607d081422c 236 SUPERFAMILY SSF52266 44 234 2.44E-29 T 23-10-2018 CDG62_11440 e42ef9ba3cb3117931142607d081422c 236 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 50 222 1.3E-9 T 23-10-2018 IPR013830 SGNH hydrolase-type esterase domain CDG62_11440 e42ef9ba3cb3117931142607d081422c 236 Gene3D G3DSA:3.40.50.1110 25 236 4.0E-20 T 23-10-2018 IPR036514 SGNH hydrolase superfamily CDG62_07900 5bbb11f8f35536612dfad913385a0f43 259 Pfam PF03883 Peroxide stress protein YaaA 1 243 3.4E-88 T 23-10-2018 IPR005583 Peroxide stress protein YaaA CDG62_07900 5bbb11f8f35536612dfad913385a0f43 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 36.942 T 23-10-2018 IPR005583 Peroxide stress protein YaaA CDG62_04015 b3409026208c5424dbb2cc9e34acca1f 170 Pfam PF05656 Protein of unknown function (DUF805) 11 122 1.3E-18 T 23-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CDG62_04015 b3409026208c5424dbb2cc9e34acca1f 170 Gene3D G3DSA:3.30.700.10 136 169 1.2E-6 T 23-10-2018 CDG62_10865 901fdd1af0c616409987ee2172359cd9 336 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 18 319 1.2E-111 T 23-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CDG62_10865 901fdd1af0c616409987ee2172359cd9 336 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 11 325 49.562 T 23-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CDG62_10865 901fdd1af0c616409987ee2172359cd9 336 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 229 235 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG62_10865 901fdd1af0c616409987ee2172359cd9 336 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 20 315 3.9E-74 T 23-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CDG62_10865 901fdd1af0c616409987ee2172359cd9 336 PIRSF PIRSF037167 5 332 1.1E-134 T 23-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CDG62_10865 901fdd1af0c616409987ee2172359cd9 336 Pfam PF05175 Methyltransferase small domain 148 240 2.4E-17 T 23-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CDG62_10865 901fdd1af0c616409987ee2172359cd9 336 Gene3D G3DSA:3.40.50.150 109 305 2.0E-48 T 23-10-2018 CDG62_10865 901fdd1af0c616409987ee2172359cd9 336 SUPERFAMILY SSF53335 21 319 4.22E-46 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_03270 c877cfea456ea3c359b2f93f083fada7 324 Pfam PF01758 Sodium Bile acid symporter family 43 220 1.9E-45 T 23-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CDG62_03270 c877cfea456ea3c359b2f93f083fada7 324 Gene3D G3DSA:1.20.1530.20 1 309 1.4E-116 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG62_16915 89cf8f2c689e22341067d987e407c504 769 Pfam PF05787 Bacterial protein of unknown function (DUF839) 81 725 6.0E-137 T 23-10-2018 IPR008557 Protein of unknown function DUF839 CDG62_16915 89cf8f2c689e22341067d987e407c504 769 SUPERFAMILY SSF63829 478 728 1.11E-7 T 23-10-2018 CDG62_18050 6fa2aa5188a65efe26b3e76694e28453 259 Pfam PF02602 Uroporphyrinogen-III synthase HemD 16 231 6.9E-24 T 23-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18050 6fa2aa5188a65efe26b3e76694e28453 259 Gene3D G3DSA:3.40.50.10090 32 166 2.3E-41 T 23-10-2018 CDG62_18050 6fa2aa5188a65efe26b3e76694e28453 259 SUPERFAMILY SSF69618 5 238 1.31E-36 T 23-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CDG62_18050 6fa2aa5188a65efe26b3e76694e28453 259 Gene3D G3DSA:3.40.50.10090 4 230 2.3E-41 T 23-10-2018 CDG62_13625 53c9aec92d7d425e0c806cb3faff0a48 254 Pfam PF03988 Repeat of Unknown Function (DUF347) 140 191 1.4E-14 T 23-10-2018 IPR007136 Protein of unknown function DUF347 CDG62_13625 53c9aec92d7d425e0c806cb3faff0a48 254 Pfam PF03988 Repeat of Unknown Function (DUF347) 195 244 1.9E-10 T 23-10-2018 IPR007136 Protein of unknown function DUF347 CDG62_13625 53c9aec92d7d425e0c806cb3faff0a48 254 Pfam PF03988 Repeat of Unknown Function (DUF347) 75 124 9.9E-16 T 23-10-2018 IPR007136 Protein of unknown function DUF347 CDG62_13625 53c9aec92d7d425e0c806cb3faff0a48 254 Pfam PF03988 Repeat of Unknown Function (DUF347) 20 71 4.7E-19 T 23-10-2018 IPR007136 Protein of unknown function DUF347 CDG62_11695 12e4bc4efdc809733db1561fe184787d 414 SUPERFAMILY SSF103473 8 409 3.66E-37 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_11695 12e4bc4efdc809733db1561fe184787d 414 Gene3D G3DSA:1.20.1250.20 9 401 1.2E-31 T 23-10-2018 CDG62_11695 12e4bc4efdc809733db1561fe184787d 414 Pfam PF07690 Major Facilitator Superfamily 22 312 2.2E-17 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_13780 428f5dad6517264ae108b40d34a5b2e5 332 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 149 273 3.4E-18 T 23-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDG62_13780 428f5dad6517264ae108b40d34a5b2e5 332 SUPERFAMILY SSF54593 11 135 2.6E-13 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_13780 428f5dad6517264ae108b40d34a5b2e5 332 Gene3D G3DSA:3.10.180.10 13 136 2.1E-24 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_13780 428f5dad6517264ae108b40d34a5b2e5 332 SUPERFAMILY SSF54593 142 299 7.43E-29 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_13780 428f5dad6517264ae108b40d34a5b2e5 332 Gene3D G3DSA:3.10.180.10 139 307 1.2E-43 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_15630 a12cb275146310a5bef4f742f75110aa 50 PIRSF PIRSF037205 1 49 4.0E-24 T 23-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 CDG62_15630 a12cb275146310a5bef4f742f75110aa 50 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 2 41 2.7E-21 T 23-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 CDG62_04760 251e95174e19f22d292b9f43c9dc667b 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 23-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CDG62_04760 251e95174e19f22d292b9f43c9dc667b 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 9.4E-25 T 23-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04760 251e95174e19f22d292b9f43c9dc667b 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.732 T 23-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid CDG62_04760 251e95174e19f22d292b9f43c9dc667b 101 Gene3D G3DSA:4.10.830.10 41 101 9.9E-22 T 23-10-2018 CDG62_04760 251e95174e19f22d292b9f43c9dc667b 101 SUPERFAMILY SSF57716 2 101 6.2E-39 T 23-10-2018 CDG62_07710 175c2152aed38f6b462d0744f74c99f5 262 ProDom PD121987 PLASMID RESISTANT TELLURIUM KLAA KLAA/KILA MAINTENANCE RESISTANCE KILA TELLURITE 64 257 6.0E-63 T 23-10-2018 CDG62_08295 2e8ca09733c7f99db031ab475f512ec1 148 SUPERFAMILY SSF89095 3 147 1.05E-38 T 23-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 CDG62_08295 2e8ca09733c7f99db031ab475f512ec1 148 Pfam PF09424 Yqey-like protein 5 147 5.6E-50 T 23-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 CDG62_08295 2e8ca09733c7f99db031ab475f512ec1 148 Gene3D G3DSA:1.10.10.410 92 148 7.0E-17 T 23-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CDG62_08295 2e8ca09733c7f99db031ab475f512ec1 148 Gene3D G3DSA:1.10.1510.10 1 91 2.0E-26 T 23-10-2018 CDG62_16760 ea1e35e6efa3639d3bbb5cbf1769b6f6 290 Pfam PF04072 Leucine carboxyl methyltransferase 56 181 1.5E-11 T 23-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 CDG62_16760 ea1e35e6efa3639d3bbb5cbf1769b6f6 290 Gene3D G3DSA:3.40.50.150 31 276 2.4E-21 T 23-10-2018 CDG62_16760 ea1e35e6efa3639d3bbb5cbf1769b6f6 290 SUPERFAMILY SSF53335 58 259 4.62E-29 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_09440 5d61d0736744340bedd11ceaea893888 567 SUPERFAMILY SSF55486 180 392 1.61E-14 T 23-10-2018 CDG62_09440 5d61d0736744340bedd11ceaea893888 567 SUPERFAMILY SSF50156 462 542 5.52E-9 T 23-10-2018 IPR036034 PDZ superfamily GO:0005515 CDG62_09440 5d61d0736744340bedd11ceaea893888 567 Pfam PF05299 M61 glycyl aminopeptidase 268 384 1.3E-46 T 23-10-2018 IPR007963 Peptidase M61, catalytic domain CDG62_09440 5d61d0736744340bedd11ceaea893888 567 Gene3D G3DSA:2.60.40.3650 1 172 1.4E-52 T 23-10-2018 CDG62_09440 5d61d0736744340bedd11ceaea893888 567 Gene3D G3DSA:2.30.42.10 469 567 1.1E-15 T 23-10-2018 CDG62_09440 5d61d0736744340bedd11ceaea893888 567 Gene3D G3DSA:1.10.390.60 175 445 3.5E-99 T 23-10-2018 CDG62_09440 5d61d0736744340bedd11ceaea893888 567 SMART SM00228 468 534 6.8E-4 T 23-10-2018 IPR001478 PDZ domain GO:0005515 CDG62_09440 5d61d0736744340bedd11ceaea893888 567 PIRSF PIRSF016493 1 567 1.3E-194 T 23-10-2018 IPR024191 Peptidase M61 CDG62_17640 6d88797e0d0dbed345e411fcd968192b 132 Pfam PF03334 Na+/H+ antiporter subunit 12 91 6.1E-24 T 23-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 CDG62_17640 6d88797e0d0dbed345e411fcd968192b 132 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 96 3.3E-24 T 23-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 CDG62_18170 257c3fedb64b1ff63e3088881cb194a4 343 SUPERFAMILY SSF56601 89 336 2.62E-59 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG62_18170 257c3fedb64b1ff63e3088881cb194a4 343 Gene3D G3DSA:3.40.710.10 65 338 2.9E-68 T 23-10-2018 CDG62_18170 257c3fedb64b1ff63e3088881cb194a4 343 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 91 320 1.3E-59 T 23-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CDG62_18170 257c3fedb64b1ff63e3088881cb194a4 343 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 204 217 1.2E-12 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG62_18170 257c3fedb64b1ff63e3088881cb194a4 343 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 125 136 1.2E-12 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG62_18170 257c3fedb64b1ff63e3088881cb194a4 343 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 177 194 1.2E-12 T 23-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CDG62_04485 219f33b9f3042a5f515eafaca7233f28 433 PIRSF PIRSF006603 1 432 1.1E-62 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG62_04485 219f33b9f3042a5f515eafaca7233f28 433 Pfam PF01554 MatE 229 388 4.5E-30 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG62_04485 219f33b9f3042a5f515eafaca7233f28 433 Pfam PF01554 MatE 3 162 7.4E-28 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG62_04485 219f33b9f3042a5f515eafaca7233f28 433 TIGRFAM TIGR00797 matE: MATE efflux family protein 3 403 1.0E-90 T 23-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CDG62_13955 e0b9f4368095a8a49efcb2ebd8cd1c61 158 Gene3D G3DSA:2.40.128.640 48 156 3.2E-21 T 23-10-2018 CDG62_13955 e0b9f4368095a8a49efcb2ebd8cd1c61 158 Pfam PF04170 NlpE N-terminal domain 60 143 1.2E-17 T 23-10-2018 IPR007298 Copper resistance lipoprotein NlpE CDG62_05610 865cf13636ea5f309fed308a484f332b 170 Pfam PF07566 Domain of Unknown Function (DUF1543) 16 69 4.4E-19 T 23-10-2018 IPR011440 Domain of unknown function DUF1543 CDG62_05610 865cf13636ea5f309fed308a484f332b 170 Gene3D G3DSA:3.10.20.10 1 66 4.1E-24 T 23-10-2018 CDG62_05610 865cf13636ea5f309fed308a484f332b 170 Gene3D G3DSA:3.50.100.10 67 161 1.5E-23 T 23-10-2018 CDG62_04635 4c5e6bff964822e40a29a4d2d4d95a78 290 Pfam PF13622 Thioesterase-like superfamily 33 282 2.1E-50 T 23-10-2018 CDG62_04635 4c5e6bff964822e40a29a4d2d4d95a78 290 SUPERFAMILY SSF54637 115 283 1.64E-45 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_04635 4c5e6bff964822e40a29a4d2d4d95a78 290 Gene3D G3DSA:3.10.129.90 2 287 2.3E-93 T 23-10-2018 CDG62_04635 4c5e6bff964822e40a29a4d2d4d95a78 290 SUPERFAMILY SSF54637 5 112 2.53E-36 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_10860 ff1a6e5fc0d606b17d8f4903e5c05be9 140 Gene3D G3DSA:1.20.1270.180 34 137 2.2E-6 T 23-10-2018 CDG62_10860 ff1a6e5fc0d606b17d8f4903e5c05be9 140 Pfam PF07007 Lysozyme inhibitor LprI 41 129 2.1E-11 T 23-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal CDG62_16070 9626137b17f51817b8fe1e7d00aff3c5 91 Gene3D G3DSA:3.30.310.50 1 91 9.8E-22 T 23-10-2018 CDG62_16070 9626137b17f51817b8fe1e7d00aff3c5 91 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 4 88 2.7E-18 T 23-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 CDG62_15095 0507c8cd08aec89e869d41567b8af0de 699 SUPERFAMILY SSF56935 26 695 2.89E-110 T 23-10-2018 CDG62_15095 0507c8cd08aec89e869d41567b8af0de 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 152 4.2E-20 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_15095 0507c8cd08aec89e869d41567b8af0de 699 Gene3D G3DSA:2.40.170.20 166 696 7.8E-90 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_15095 0507c8cd08aec89e869d41567b8af0de 699 Gene3D G3DSA:2.170.130.10 31 158 3.9E-19 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_15095 0507c8cd08aec89e869d41567b8af0de 699 Pfam PF00593 TonB dependent receptor 236 695 1.8E-45 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_04425 7e336bc945e06ee2172f44e0e8d73fbb 716 Pfam PF12805 FUSC-like inner membrane protein yccS 68 344 9.4E-82 T 23-10-2018 IPR032692 Integral membrane protein YccS, N-terminal CDG62_04425 7e336bc945e06ee2172f44e0e8d73fbb 716 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 12 707 1.7E-208 T 23-10-2018 IPR010019 Integral membrane protein, YccS CDG62_04425 7e336bc945e06ee2172f44e0e8d73fbb 716 Pfam PF13515 Fusaric acid resistance protein-like 413 530 1.3E-22 T 23-10-2018 CDG62_04425 7e336bc945e06ee2172f44e0e8d73fbb 716 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 13 707 4.9E-200 T 23-10-2018 IPR010020 Integral membrane protein, YccS/YhfK CDG62_11715 f013781a48c476d8535b744061bc4971 483 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 2 341 7.1E-109 T 23-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase CDG62_11715 f013781a48c476d8535b744061bc4971 483 Gene3D G3DSA:3.50.50.60 1 459 2.2E-116 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_11715 f013781a48c476d8535b744061bc4971 483 SUPERFAMILY SSF51905 2 232 3.89E-14 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_03220 191db854d2b25292b9d99076c814b5a5 152 Gene3D G3DSA:1.10.10.10 2 57 6.4E-23 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_03220 191db854d2b25292b9d99076c814b5a5 152 SMART SM00344 4 113 4.7E-34 T 23-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CDG62_03220 191db854d2b25292b9d99076c814b5a5 152 SUPERFAMILY SSF46785 4 63 7.27E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_03220 191db854d2b25292b9d99076c814b5a5 152 Gene3D G3DSA:3.30.70.920 58 140 2.9E-21 T 23-10-2018 CDG62_03220 191db854d2b25292b9d99076c814b5a5 152 SUPERFAMILY SSF54909 68 149 2.28E-18 T 23-10-2018 IPR011008 Dimeric alpha-beta barrel CDG62_03220 191db854d2b25292b9d99076c814b5a5 152 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 4.1E-19 T 23-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CDG62_03220 191db854d2b25292b9d99076c814b5a5 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 4.2E-19 T 23-10-2018 CDG62_03220 191db854d2b25292b9d99076c814b5a5 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 9.4E-15 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_03220 191db854d2b25292b9d99076c814b5a5 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 9.4E-15 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_03220 191db854d2b25292b9d99076c814b5a5 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 9.4E-15 T 23-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 CDG62_03120 d5dc972074facc13c9d579ce213de424 366 Gene3D G3DSA:1.10.287.470 92 164 6.6E-75 T 23-10-2018 CDG62_03120 d5dc972074facc13c9d579ce213de424 366 Gene3D G3DSA:2.40.420.20 280 350 6.6E-75 T 23-10-2018 CDG62_03120 d5dc972074facc13c9d579ce213de424 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 267 9.5E-19 T 23-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CDG62_03120 d5dc972074facc13c9d579ce213de424 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 352 7.7E-72 T 23-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CDG62_03120 d5dc972074facc13c9d579ce213de424 366 Gene3D G3DSA:2.40.50.100 58 204 6.6E-75 T 23-10-2018 CDG62_03120 d5dc972074facc13c9d579ce213de424 366 Gene3D G3DSA:2.40.30.170 45 279 6.6E-75 T 23-10-2018 CDG62_03120 d5dc972074facc13c9d579ce213de424 366 SUPERFAMILY SSF111369 49 211 2.48E-20 T 23-10-2018 CDG62_06250 c22d6574909420ec6263944a261503f1 189 Gene3D G3DSA:3.40.30.10 38 188 4.3E-48 T 23-10-2018 CDG62_06250 c22d6574909420ec6263944a261503f1 189 SUPERFAMILY SSF52833 40 186 1.22E-47 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_06250 c22d6574909420ec6263944a261503f1 189 PIRSF PIRSF000239 34 184 5.3E-32 T 23-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG62_06250 c22d6574909420ec6263944a261503f1 189 Pfam PF00578 AhpC/TSA family 41 165 7.4E-41 T 23-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CDG62_14545 5a14dd29d9ef6092e1d445d3b23d1b2b 189 Pfam PF00692 dUTPase 77 184 1.2E-8 T 23-10-2018 IPR029054 dUTPase-like CDG62_14545 5a14dd29d9ef6092e1d445d3b23d1b2b 189 Gene3D G3DSA:2.70.40.10 1 161 3.7E-55 T 23-10-2018 IPR036157 dUTPase-like superfamily CDG62_14545 5a14dd29d9ef6092e1d445d3b23d1b2b 189 SUPERFAMILY SSF51283 3 188 6.8E-55 T 23-10-2018 IPR036157 dUTPase-like superfamily CDG62_14545 5a14dd29d9ef6092e1d445d3b23d1b2b 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 188 1.8E-51 T 23-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 CDG62_14545 5a14dd29d9ef6092e1d445d3b23d1b2b 189 Hamap MF_00146 dCTP deaminase [dcd]. 1 189 28.906 T 23-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 CDG62_03305 bc7da7c2a3763e3646300c1b77cd0bd6 403 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 399 47.478 T 23-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CDG62_03305 bc7da7c2a3763e3646300c1b77cd0bd6 403 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 4 397 1.5E-171 T 23-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CDG62_03305 bc7da7c2a3763e3646300c1b77cd0bd6 403 SUPERFAMILY SSF54675 2 140 2.16E-41 T 23-10-2018 CDG62_03305 bc7da7c2a3763e3646300c1b77cd0bd6 403 SUPERFAMILY SSF51690 121 396 2.16E-89 T 23-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CDG62_03305 bc7da7c2a3763e3646300c1b77cd0bd6 403 Gene3D G3DSA:3.20.140.10 1 403 1.3E-148 T 23-10-2018 CDG62_03305 bc7da7c2a3763e3646300c1b77cd0bd6 403 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 398 3.3E-82 T 23-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CDG62_03305 bc7da7c2a3763e3646300c1b77cd0bd6 403 PIRSF PIRSF000484 1 390 5.4E-78 T 23-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CDG62_12730 075dc166ddc9ff250ed4d37bcb32fad9 283 Gene3D G3DSA:3.40.50.720 4 268 3.2E-88 T 23-10-2018 CDG62_12730 075dc166ddc9ff250ed4d37bcb32fad9 283 SUPERFAMILY SSF51735 2 270 4.64E-56 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_12730 075dc166ddc9ff250ed4d37bcb32fad9 283 Gene3D G3DSA:3.90.25.10 138 269 3.2E-88 T 23-10-2018 CDG62_12730 075dc166ddc9ff250ed4d37bcb32fad9 283 Pfam PF13460 NAD(P)H-binding 7 185 1.9E-21 T 23-10-2018 IPR016040 NAD(P)-binding domain CDG62_01700 28142e9dc7e5f24e27248b9f64862afb 147 Gene3D G3DSA:2.170.150.20 1 146 1.1E-58 T 23-10-2018 CDG62_01700 28142e9dc7e5f24e27248b9f64862afb 147 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 1 129 37.601 T 23-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CDG62_01700 28142e9dc7e5f24e27248b9f64862afb 147 SUPERFAMILY SSF51316 7 142 5.07E-59 T 23-10-2018 IPR011057 Mss4-like superfamily CDG62_01700 28142e9dc7e5f24e27248b9f64862afb 147 Pfam PF01641 SelR domain 11 128 7.0E-49 T 23-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CDG62_01700 28142e9dc7e5f24e27248b9f64862afb 147 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 9 137 3.8E-60 T 23-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CDG62_05040 e40bc349397a7fadd69d75e2c6c0c7fe 276 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 53 217 2.2E-37 T 23-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 CDG62_05040 e40bc349397a7fadd69d75e2c6c0c7fe 276 Pfam PF01066 CDP-alcohol phosphatidyltransferase 46 109 9.4E-13 T 23-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CDG62_05040 e40bc349397a7fadd69d75e2c6c0c7fe 276 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 87 109 - T 23-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CDG62_05040 e40bc349397a7fadd69d75e2c6c0c7fe 276 Gene3D G3DSA:1.20.120.1760 36 193 1.1E-12 T 23-10-2018 CDG62_07490 08c05628961f9839922c107456260acb 505 SUPERFAMILY SSF56954 25 487 1.83E-50 T 23-10-2018 CDG62_07490 08c05628961f9839922c107456260acb 505 Pfam PF02321 Outer membrane efflux protein 312 484 1.4E-14 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_07490 08c05628961f9839922c107456260acb 505 Pfam PF02321 Outer membrane efflux protein 48 289 4.8E-13 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_04315 78dcfb8b63f1b387d86a6bcea39b8f55 1304 SUPERFAMILY SSF50998 734 1039 1.06E-6 T 23-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CDG62_03105 672aa716245801899502c276191ff10f 433 Pfam PF00860 Permease family 30 403 5.8E-91 T 23-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 CDG62_03105 672aa716245801899502c276191ff10f 433 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 27 424 1.8E-104 T 23-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CDG62_17345 4715b0468dbae07cc610c5bab1e6c786 331 Gene3D G3DSA:3.30.565.10 123 294 8.0E-7 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_17345 4715b0468dbae07cc610c5bab1e6c786 331 SUPERFAMILY SSF55874 148 297 1.2E-9 T 23-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CDG62_05860 f46d2cfce561faf654d38ec4cce83901 285 SMART SM00563 94 207 2.5E-15 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_05860 f46d2cfce561faf654d38ec4cce83901 285 Pfam PF01553 Acyltransferase 83 203 3.3E-17 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_05860 f46d2cfce561faf654d38ec4cce83901 285 SUPERFAMILY SSF69593 45 229 8.63E-20 T 23-10-2018 CDG62_02540 64085292064006297e9baf63dc987199 141 Pfam PF03203 MerC mercury resistance protein 10 121 8.3E-19 T 23-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 CDG62_02540 64085292064006297e9baf63dc987199 141 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 21 141 1.0E-55 T 23-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 CDG62_09550 6d51889b11a34a958f61f55c2ac03e2b 85 SUPERFAMILY SSF46785 20 81 4.54E-6 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00870 c284243e9bbe665d8c16bad8c892eb90 509 Pfam PF14319 Transposase zinc-binding domain 51 149 1.0E-20 T 23-10-2018 IPR026889 Transposase zinc-binding domain CDG62_00870 c284243e9bbe665d8c16bad8c892eb90 509 Pfam PF04986 Putative transposase 179 403 2.6E-47 T 23-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 CDG62_12415 c284243e9bbe665d8c16bad8c892eb90 509 Pfam PF14319 Transposase zinc-binding domain 51 149 1.0E-20 T 23-10-2018 IPR026889 Transposase zinc-binding domain CDG62_12415 c284243e9bbe665d8c16bad8c892eb90 509 Pfam PF04986 Putative transposase 179 403 2.6E-47 T 23-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 CDG62_03475 71f6a57c886b3545dfb331831638dd59 145 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 27 143 1.2E-23 T 23-10-2018 IPR019223 Domain of unknown function DUF2147 CDG62_03475 71f6a57c886b3545dfb331831638dd59 145 Gene3D G3DSA:2.40.128.520 23 145 2.9E-16 T 23-10-2018 CDG62_16020 2952582dacd4af6a455336343d734663 255 SUPERFAMILY SSF53613 4 240 4.91E-60 T 23-10-2018 IPR029056 Ribokinase-like CDG62_16020 2952582dacd4af6a455336343d734663 255 Gene3D G3DSA:3.40.1190.20 1 237 5.4E-78 T 23-10-2018 IPR029056 Ribokinase-like CDG62_16020 2952582dacd4af6a455336343d734663 255 Pfam PF08543 Phosphomethylpyrimidine kinase 12 243 3.7E-68 T 23-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CDG62_02915 0b561817188e9f76e36b8b036ebef1e0 289 Gene3D G3DSA:3.40.190.170 3 246 6.5E-11 T 23-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily CDG62_09990 ef16bd04b720ba3b7b4fcfc3b173d773 198 SUPERFAMILY SSF52833 4 197 8.82E-46 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_09990 ef16bd04b720ba3b7b4fcfc3b173d773 198 Pfam PF01323 DSBA-like thioredoxin domain 4 194 7.1E-45 T 23-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CDG62_09990 ef16bd04b720ba3b7b4fcfc3b173d773 198 Gene3D G3DSA:3.40.30.10 3 197 1.2E-62 T 23-10-2018 CDG62_09990 ef16bd04b720ba3b7b4fcfc3b173d773 198 PIRSF PIRSF006386 1 198 9.3E-64 T 23-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CDG62_03345 86d5e63e6a60e74e8fc3a438060f75eb 385 Gene3D G3DSA:3.40.640.10 42 281 1.8E-128 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_03345 86d5e63e6a60e74e8fc3a438060f75eb 385 Gene3D G3DSA:3.90.1150.10 18 381 1.8E-128 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_03345 86d5e63e6a60e74e8fc3a438060f75eb 385 SUPERFAMILY SSF53383 6 384 3.67E-96 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_03345 86d5e63e6a60e74e8fc3a438060f75eb 385 Pfam PF00155 Aminotransferase class I and II 30 381 2.6E-59 T 23-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CDG62_08440 da338310d4095107ad995d91425fb2ce 165 SUPERFAMILY SSF54690 22 141 1.96E-40 T 23-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 CDG62_08440 da338310d4095107ad995d91425fb2ce 165 Pfam PF02391 MoaE protein 24 121 3.6E-33 T 23-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 CDG62_08440 da338310d4095107ad995d91425fb2ce 165 Gene3D G3DSA:3.90.1170.40 6 148 1.0E-42 T 23-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 CDG62_09385 a12d86a215efc240f6dbf6c1a056c151 308 Pfam PF00756 Putative esterase 65 301 5.1E-8 T 23-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CDG62_09385 a12d86a215efc240f6dbf6c1a056c151 308 Gene3D G3DSA:3.40.50.1820 40 307 5.6E-58 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_09385 a12d86a215efc240f6dbf6c1a056c151 308 SUPERFAMILY SSF53474 49 303 4.18E-43 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_10800 6ee212bf0b909930e811bff8743d71f2 197 Gene3D G3DSA:3.40.109.10 1 197 8.4E-83 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG62_10800 6ee212bf0b909930e811bff8743d71f2 197 SUPERFAMILY SSF55469 1 196 7.07E-68 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG62_10800 6ee212bf0b909930e811bff8743d71f2 197 Pfam PF00881 Nitroreductase family 7 175 3.2E-15 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDG62_17900 dfe405c663a562e2c734d6c382ebfb40 456 Pfam PF13726 Na+-H+ antiporter family 3 88 1.8E-27 T 23-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal CDG62_17900 dfe405c663a562e2c734d6c382ebfb40 456 Pfam PF03553 Na+/H+ antiporter family 150 450 1.2E-61 T 23-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CDG62_17720 4c153f0046c594cb3cb4a95b46118792 304 SUPERFAMILY SSF103481 41 137 2.62E-10 T 23-10-2018 CDG62_17720 4c153f0046c594cb3cb4a95b46118792 304 Pfam PF00892 EamA-like transporter family 152 282 1.4E-11 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_17720 4c153f0046c594cb3cb4a95b46118792 304 Pfam PF00892 EamA-like transporter family 7 137 1.5E-12 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_17760 10b98aeaf33ad8ff0064250faf6b4e2e 693 Pfam PF04632 Fusaric acid resistance protein family 16 677 1.1E-145 T 23-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 CDG62_03565 9eede4a3d4b41b929f2875de371c9a34 227 Pfam PF01551 Peptidase family M23 125 219 4.2E-31 T 23-10-2018 IPR016047 Peptidase M23 CDG62_03565 9eede4a3d4b41b929f2875de371c9a34 227 Gene3D G3DSA:2.70.70.10 68 226 1.5E-44 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG62_03565 9eede4a3d4b41b929f2875de371c9a34 227 SUPERFAMILY SSF51261 64 223 6.8E-52 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG62_16415 7f630409a8c7756c76bfa8192910f48d 183 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 11 182 28.837 T 23-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDG62_16415 7f630409a8c7756c76bfa8192910f48d 183 SUPERFAMILY SSF55200 95 183 1.16E-32 T 23-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 CDG62_16415 7f630409a8c7756c76bfa8192910f48d 183 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 95 180 4.8E-37 T 23-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CDG62_16415 7f630409a8c7756c76bfa8192910f48d 183 Gene3D G3DSA:3.30.110.10 88 183 3.9E-37 T 23-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 CDG62_16415 7f630409a8c7756c76bfa8192910f48d 183 Gene3D G3DSA:3.10.20.80 14 87 7.3E-29 T 23-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDG62_16415 7f630409a8c7756c76bfa8192910f48d 183 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 19 182 2.2E-66 T 23-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDG62_16415 7f630409a8c7756c76bfa8192910f48d 183 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 19 88 2.8E-28 T 23-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDG62_16415 7f630409a8c7756c76bfa8192910f48d 183 SUPERFAMILY SSF54364 17 90 3.01E-27 T 23-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CDG62_10495 3216eb55a08f94243dde83ea5ff46891 217 Pfam PF00881 Nitroreductase family 8 193 5.1E-22 T 23-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CDG62_10495 3216eb55a08f94243dde83ea5ff46891 217 SUPERFAMILY SSF55469 1 215 7.85E-60 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG62_10495 3216eb55a08f94243dde83ea5ff46891 217 Gene3D G3DSA:3.40.109.10 1 217 2.1E-54 T 23-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CDG62_02550 802af6574a61f58d7f3799d0d68342a4 208 PIRSF PIRSF001458 1 208 2.6E-90 T 23-10-2018 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CDG62_02550 802af6574a61f58d7f3799d0d68342a4 208 SUPERFAMILY SSF46785 24 82 7.21E-18 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_02550 802af6574a61f58d7f3799d0d68342a4 208 Pfam PF12324 Helix-turn-helix domain of alkylmercury lyase 23 77 2.0E-20 T 23-10-2018 IPR024259 Alkylmercury lyase, helix-turn-helix domain CDG62_02550 802af6574a61f58d7f3799d0d68342a4 208 Pfam PF03243 Alkylmercury lyase 78 199 7.9E-38 T 23-10-2018 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CDG62_02550 802af6574a61f58d7f3799d0d68342a4 208 Gene3D G3DSA:2.40.10.490 6 207 7.8E-81 T 23-10-2018 CDG62_02550 802af6574a61f58d7f3799d0d68342a4 208 PRINTS PR01699 Organomercurial lyase signature 94 103 2.0E-27 T 23-10-2018 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CDG62_02550 802af6574a61f58d7f3799d0d68342a4 208 PRINTS PR01699 Organomercurial lyase signature 119 130 2.0E-27 T 23-10-2018 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CDG62_02550 802af6574a61f58d7f3799d0d68342a4 208 PRINTS PR01699 Organomercurial lyase signature 165 180 2.0E-27 T 23-10-2018 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CDG62_02550 802af6574a61f58d7f3799d0d68342a4 208 PRINTS PR01699 Organomercurial lyase signature 77 91 2.0E-27 T 23-10-2018 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CDG62_02550 802af6574a61f58d7f3799d0d68342a4 208 PRINTS PR01699 Organomercurial lyase signature 36 49 2.0E-27 T 23-10-2018 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 CDG62_02550 802af6574a61f58d7f3799d0d68342a4 208 SUPERFAMILY SSF160387 83 204 5.75E-43 T 23-10-2018 CDG62_07665 558b7f8c763ecc5c3bfbacb6bde8bcfa 76 Pfam PF09939 Uncharacterized protein conserved in bacteria (DUF2171) 9 69 1.0E-20 T 23-10-2018 IPR018684 Protein of unknown function DUF2171 CDG62_12305 1f1f51456cca334897fe76fb6458d5a2 333 Gene3D G3DSA:3.40.190.10 173 277 4.8E-44 T 23-10-2018 CDG62_12305 1f1f51456cca334897fe76fb6458d5a2 333 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 88 316 2.6E-41 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG62_12305 1f1f51456cca334897fe76fb6458d5a2 333 SUPERFAMILY SSF53850 80 316 4.45E-46 T 23-10-2018 CDG62_12305 1f1f51456cca334897fe76fb6458d5a2 333 Gene3D G3DSA:3.40.190.10 84 308 4.8E-44 T 23-10-2018 CDG62_12305 1f1f51456cca334897fe76fb6458d5a2 333 SMART SM00062 86 318 4.6E-29 T 23-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CDG62_09280 2e4a4deab060be12d27a0cf47d33784d 149 Pfam PF13673 Acetyltransferase (GNAT) domain 25 138 1.0E-13 T 23-10-2018 IPR000182 GNAT domain CDG62_09280 2e4a4deab060be12d27a0cf47d33784d 149 SUPERFAMILY SSF55729 14 146 4.29E-20 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_09280 2e4a4deab060be12d27a0cf47d33784d 149 Gene3D G3DSA:3.40.630.30 4 146 3.0E-30 T 23-10-2018 CDG62_00445 e524cbb3167f5bfc5f6f81500cbe105c 311 Gene3D G3DSA:1.10.10.10 144 237 1.3E-27 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_00445 e524cbb3167f5bfc5f6f81500cbe105c 311 Pfam PF01051 Initiator Replication protein 4 228 9.6E-57 T 23-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CDG62_00445 e524cbb3167f5bfc5f6f81500cbe105c 311 SUPERFAMILY SSF46785 5 130 4.41E-32 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00445 e524cbb3167f5bfc5f6f81500cbe105c 311 Gene3D G3DSA:1.10.10.10 1 143 8.7E-41 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_00445 e524cbb3167f5bfc5f6f81500cbe105c 311 SUPERFAMILY SSF46785 130 231 1.24E-31 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_13790 5f03786d535da54e0c27af5ea5c99fe8 319 Gene3D G3DSA:3.90.850.10 42 303 3.8E-56 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDG62_13790 5f03786d535da54e0c27af5ea5c99fe8 319 SUPERFAMILY SSF56529 60 316 3.01E-54 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDG62_13790 5f03786d535da54e0c27af5ea5c99fe8 319 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 73 316 5.1E-51 T 23-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDG62_08710 cd1b1f3e20103266bb1f6e53072a3678 108 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 12 107 3.9E-38 T 23-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 CDG62_08710 cd1b1f3e20103266bb1f6e53072a3678 108 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 19 91 1.6E-17 T 23-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 CDG62_16530 2b2fafd040c40aaab534630e5fa49431 445 Pfam PF00909 Ammonium Transporter Family 41 427 2.3E-110 T 23-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CDG62_16530 2b2fafd040c40aaab534630e5fa49431 445 ProSitePatterns PS01219 Ammonium transporters signature. 187 212 - T 23-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CDG62_16530 2b2fafd040c40aaab534630e5fa49431 445 Gene3D G3DSA:1.10.3430.10 18 443 4.7E-133 T 23-10-2018 IPR029020 Ammonium/urea transporter CDG62_16530 2b2fafd040c40aaab534630e5fa49431 445 SUPERFAMILY SSF111352 37 404 8.37E-101 T 23-10-2018 CDG62_16530 2b2fafd040c40aaab534630e5fa49431 445 TIGRFAM TIGR00836 amt: ammonium transporter 39 427 2.4E-112 T 23-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CDG62_03920 77d1655cccc54de58ed0794fc1ac9cd9 625 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 6 625 33.29 T 23-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup CDG62_03920 77d1655cccc54de58ed0794fc1ac9cd9 625 Pfam PF02705 K+ potassium transporter 15 546 3.2E-202 T 23-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CDG62_18760 d6cd1bdb672b1e8333235543cd8813dc 244 SUPERFAMILY SSF53448 4 226 6.75E-33 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_18760 d6cd1bdb672b1e8333235543cd8813dc 244 Gene3D G3DSA:3.90.550.10 3 198 1.4E-24 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_18760 d6cd1bdb672b1e8333235543cd8813dc 244 Pfam PF00535 Glycosyl transferase family 2 4 121 1.0E-18 T 23-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDG62_18670 efba75ff40a9f734e898bca476ce7e07 284 SUPERFAMILY SSF52540 3 278 6.21E-51 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_18670 efba75ff40a9f734e898bca476ce7e07 284 Gene3D G3DSA:3.40.50.300 1 280 4.7E-61 T 23-10-2018 CDG62_18670 efba75ff40a9f734e898bca476ce7e07 284 Pfam PF13614 AAA domain 5 205 8.1E-39 T 23-10-2018 IPR025669 AAA domain CDG62_18625 13ec366d85dfbd8011b3f34b8bb9e9f7 132 Gene3D G3DSA:3.30.300.20 4 132 2.5E-29 T 23-10-2018 IPR015946 K homology domain-like, alpha/beta CDG62_18625 13ec366d85dfbd8011b3f34b8bb9e9f7 132 SUPERFAMILY SSF82784 20 131 2.49E-26 T 23-10-2018 IPR036102 OsmC/Ohr superfamily CDG62_18625 13ec366d85dfbd8011b3f34b8bb9e9f7 132 Pfam PF02566 OsmC-like protein 37 129 7.3E-15 T 23-10-2018 IPR003718 OsmC/Ohr family CDG62_05975 9e39900ebc2df2722b8be99d07d693a2 341 Gene3D G3DSA:3.40.50.150 1 148 3.9E-37 T 23-10-2018 CDG62_05975 9e39900ebc2df2722b8be99d07d693a2 341 Pfam PF08468 Methyltransferase small domain N-terminal 5 156 2.2E-42 T 23-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 CDG62_05975 9e39900ebc2df2722b8be99d07d693a2 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 1 337 37.827 T 23-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 CDG62_05975 9e39900ebc2df2722b8be99d07d693a2 341 SUPERFAMILY SSF53335 152 315 5.08E-23 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_05975 9e39900ebc2df2722b8be99d07d693a2 341 Pfam PF05175 Methyltransferase small domain 164 333 2.5E-52 T 23-10-2018 IPR007848 Methyltransferase small domain GO:0008168 CDG62_05975 9e39900ebc2df2722b8be99d07d693a2 341 Gene3D G3DSA:3.40.50.150 150 340 6.4E-39 T 23-10-2018 CDG62_05975 9e39900ebc2df2722b8be99d07d693a2 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 266 272 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG62_17690 0541cc95597a795825b7f5b5523b0688 109 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 1.3E-35 T 23-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDG62_17690 0541cc95597a795825b7f5b5523b0688 109 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.3E-35 T 23-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDG62_17690 0541cc95597a795825b7f5b5523b0688 109 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 1.3E-35 T 23-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDG62_17690 0541cc95597a795825b7f5b5523b0688 109 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.3E-35 T 23-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDG62_17690 0541cc95597a795825b7f5b5523b0688 109 Pfam PF03840 Preprotein translocase SecG subunit 4 72 3.0E-21 T 23-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDG62_17690 0541cc95597a795825b7f5b5523b0688 109 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 73 5.2E-26 T 23-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CDG62_11250 9010106584e9aa98def53b8da3643786 139 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 98 2.0E-14 T 23-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CDG62_11250 9010106584e9aa98def53b8da3643786 139 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 67 80 2.0E-14 T 23-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CDG62_11250 9010106584e9aa98def53b8da3643786 139 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 112 2.0E-14 T 23-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CDG62_11250 9010106584e9aa98def53b8da3643786 139 Gene3D G3DSA:2.40.50.100 62 136 1.2E-27 T 23-10-2018 CDG62_11250 9010106584e9aa98def53b8da3643786 139 Pfam PF00364 Biotin-requiring enzyme 66 136 6.9E-21 T 23-10-2018 IPR000089 Biotin/lipoyl attachment CDG62_11250 9010106584e9aa98def53b8da3643786 139 SUPERFAMILY SSF51230 66 136 1.26E-21 T 23-10-2018 IPR011053 Single hybrid motif CDG62_11250 9010106584e9aa98def53b8da3643786 139 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 136 4.1E-38 T 23-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CDG62_07960 c5cabd60b743d9d2256684a94f22d604 426 SUPERFAMILY SSF55021 260 337 2.03E-18 T 23-10-2018 CDG62_07960 c5cabd60b743d9d2256684a94f22d604 426 Gene3D G3DSA:3.40.1160.10 1 257 8.4E-88 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG62_07960 c5cabd60b743d9d2256684a94f22d604 426 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 414 5.2E-132 T 23-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG62_07960 c5cabd60b743d9d2256684a94f22d604 426 Pfam PF00696 Amino acid kinase family 3 229 7.3E-52 T 23-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 CDG62_07960 c5cabd60b743d9d2256684a94f22d604 426 SUPERFAMILY SSF55021 344 416 1.89E-24 T 23-10-2018 CDG62_07960 c5cabd60b743d9d2256684a94f22d604 426 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 59 414 8.2E-112 T 23-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG62_07960 c5cabd60b743d9d2256684a94f22d604 426 SUPERFAMILY SSF53633 4 254 1.83E-76 T 23-10-2018 IPR036393 Acetylglutamate kinase-like superfamily CDG62_07960 c5cabd60b743d9d2256684a94f22d604 426 Pfam PF13840 ACT domain 348 410 3.3E-18 T 23-10-2018 IPR027795 CASTOR, ACT domain CDG62_07960 c5cabd60b743d9d2256684a94f22d604 426 Gene3D G3DSA:3.30.2130.10 258 423 7.3E-60 T 23-10-2018 CDG62_07960 c5cabd60b743d9d2256684a94f22d604 426 Pfam PF01842 ACT domain 279 336 3.0E-11 T 23-10-2018 IPR002912 ACT domain CDG62_07960 c5cabd60b743d9d2256684a94f22d604 426 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 23-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG62_07960 c5cabd60b743d9d2256684a94f22d604 426 PIRSF PIRSF000726 53 422 3.4E-137 T 23-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG62_07960 c5cabd60b743d9d2256684a94f22d604 426 PIRSF PIRSF000726 1 62 1.4E-20 T 23-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 CDG62_13665 9acc790a7c277543e8a44bd62649e16e 161 Pfam PF00293 NUDIX domain 7 127 2.7E-17 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG62_13665 9acc790a7c277543e8a44bd62649e16e 161 Gene3D G3DSA:3.90.79.10 1 153 1.5E-38 T 23-10-2018 CDG62_13665 9acc790a7c277543e8a44bd62649e16e 161 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDG62_13665 9acc790a7c277543e8a44bd62649e16e 161 SUPERFAMILY SSF55811 3 147 2.44E-29 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG62_15140 069872af835b8f3916d7d51e441975a1 262 SUPERFAMILY SSF53474 10 258 3.41E-59 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_15140 069872af835b8f3916d7d51e441975a1 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 205 219 6.5E-6 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_15140 069872af835b8f3916d7d51e441975a1 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 6.5E-6 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_15140 069872af835b8f3916d7d51e441975a1 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 6.5E-6 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_15140 069872af835b8f3916d7d51e441975a1 262 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 18 258 1.3E-82 T 23-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 CDG62_15140 069872af835b8f3916d7d51e441975a1 262 Pfam PF00561 alpha/beta hydrolase fold 24 246 7.7E-19 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_15140 069872af835b8f3916d7d51e441975a1 262 Gene3D G3DSA:3.40.50.1820 3 259 2.6E-60 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_14610 95b4f713fea862dc6e2ce3e95b8e6f8c 207 Pfam PF01810 LysE type translocator 17 203 8.7E-35 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_17230 de6d3cb997bffc5e8b99eea42cff52af 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 68 1.1E-7 T 23-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CDG62_17230 de6d3cb997bffc5e8b99eea42cff52af 202 Gene3D G3DSA:1.10.357.10 14 181 6.4E-17 T 23-10-2018 CDG62_17230 de6d3cb997bffc5e8b99eea42cff52af 202 SUPERFAMILY SSF46689 10 84 7.09E-14 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_11805 42d901fb694d9c6dd231b31abf710d78 174 Gene3D G3DSA:3.90.190.10 3 155 5.5E-34 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like CDG62_11805 42d901fb694d9c6dd231b31abf710d78 174 SUPERFAMILY SSF52799 8 135 1.6E-16 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like CDG62_00800 ea03667ee737f2be767170d9221d0b90 874 TIGRFAM TIGR02687 TIGR02687: TIGR02687 family protein 8 865 2.8E-262 T 23-10-2018 IPR014060 Conserved hypothetical protein CHP02687 CDG62_00800 ea03667ee737f2be767170d9221d0b90 874 Pfam PF08665 PglZ domain 486 660 1.0E-55 T 23-10-2018 IPR013973 PglZ domain CDG62_14640 d5273429bddc7c00e9aeb75b41863f86 389 SUPERFAMILY SSF111369 233 324 6.41E-9 T 23-10-2018 CDG62_14640 d5273429bddc7c00e9aeb75b41863f86 389 Pfam PF13437 HlyD family secretion protein 257 375 4.1E-14 T 23-10-2018 CDG62_14640 d5273429bddc7c00e9aeb75b41863f86 389 Gene3D G3DSA:2.40.30.170 271 389 1.5E-36 T 23-10-2018 CDG62_14640 d5273429bddc7c00e9aeb75b41863f86 389 Gene3D G3DSA:1.10.287.470 123 149 4.1E-12 T 23-10-2018 CDG62_14640 d5273429bddc7c00e9aeb75b41863f86 389 Gene3D G3DSA:1.10.287.470 150 232 1.6E-7 T 23-10-2018 CDG62_14640 d5273429bddc7c00e9aeb75b41863f86 389 Gene3D G3DSA:2.40.50.100 90 122 4.1E-12 T 23-10-2018 CDG62_14640 d5273429bddc7c00e9aeb75b41863f86 389 SUPERFAMILY SSF111369 93 173 7.19E-11 T 23-10-2018 CDG62_14640 d5273429bddc7c00e9aeb75b41863f86 389 Pfam PF13533 Biotin-lipoyl like 93 137 1.0E-9 T 23-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CDG62_14640 d5273429bddc7c00e9aeb75b41863f86 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 372 387 1.3E-5 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG62_14640 d5273429bddc7c00e9aeb75b41863f86 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 101 121 1.3E-5 T 23-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CDG62_11100 468a500f2433dfc40924eff7b312393c 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 160 9.4E-17 T 23-10-2018 IPR012910 TonB-dependent receptor, plug domain CDG62_11100 468a500f2433dfc40924eff7b312393c 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 59 697 1.6E-107 T 23-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 CDG62_11100 468a500f2433dfc40924eff7b312393c 697 Pfam PF00593 TonB dependent receptor 232 696 9.6E-58 T 23-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel CDG62_11100 468a500f2433dfc40924eff7b312393c 697 SUPERFAMILY SSF56935 48 697 3.66E-128 T 23-10-2018 CDG62_11100 468a500f2433dfc40924eff7b312393c 697 Gene3D G3DSA:2.170.130.10 41 172 2.6E-27 T 23-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily CDG62_11100 468a500f2433dfc40924eff7b312393c 697 Gene3D G3DSA:2.40.170.20 173 697 2.5E-119 T 23-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CDG62_09605 9c8e9dc8890a76ad15edaef29a1ec507 158 Pfam PF10045 Uncharacterized conserved protein (DUF2280) 1 101 3.2E-35 T 23-10-2018 IPR018738 Protein of unknown function DUF2280 CDG62_08110 345017cc0c3ed74db6b115bf9c9e26a3 264 SUPERFAMILY SSF52096 1 259 6.45E-74 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_08110 345017cc0c3ed74db6b115bf9c9e26a3 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 259 3.8E-50 T 23-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 CDG62_08110 345017cc0c3ed74db6b115bf9c9e26a3 264 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 23-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 CDG62_08110 345017cc0c3ed74db6b115bf9c9e26a3 264 Gene3D G3DSA:1.10.12.10 204 264 3.6E-19 T 23-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal CDG62_08110 345017cc0c3ed74db6b115bf9c9e26a3 264 Gene3D G3DSA:3.90.226.10 1 201 3.0E-65 T 23-10-2018 CDG62_16930 847f219fe9d804ba443896b48346773c 127 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 40 97 2.9E-5 T 23-10-2018 IPR008407 Branched-chain amino acid transport, AzlD CDG62_10110 d98573fcab777805ad98789e78f514a8 229 Pfam PF00483 Nucleotidyl transferase 2 122 3.2E-17 T 23-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CDG62_10110 d98573fcab777805ad98789e78f514a8 229 SUPERFAMILY SSF53448 1 223 6.76E-51 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_10110 d98573fcab777805ad98789e78f514a8 229 Gene3D G3DSA:3.90.550.10 1 225 2.0E-51 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_17585 05194a4fff1ae3d797f1910f0c242ea2 358 SUPERFAMILY SSF52151 42 336 1.2E-10 T 23-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDG62_14465 033fda785257d5d11c87fcaf8ab85621 46 Pfam PF08085 Entericidin EcnA/B family 19 39 7.7E-7 T 23-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 CDG62_18790 4d50b20097cf4cc77ce1f392163c900a 206 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 16 177 5.3E-44 T 23-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CDG62_16370 237d9232afe97da3398e7da88e89bc2b 179 SUPERFAMILY SSF52540 1 132 1.75E-15 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_16370 237d9232afe97da3398e7da88e89bc2b 179 Gene3D G3DSA:3.40.50.300 1 132 1.2E-15 T 23-10-2018 CDG62_10340 2c083d19ed74e22fe3660e16ce2b344b 114 SUPERFAMILY SSF103481 11 110 2.48E-20 T 23-10-2018 CDG62_10340 2c083d19ed74e22fe3660e16ce2b344b 114 Pfam PF00893 Small Multidrug Resistance protein 6 98 1.8E-25 T 23-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CDG62_10340 2c083d19ed74e22fe3660e16ce2b344b 114 Gene3D G3DSA:1.10.3730.20 5 114 4.3E-35 T 23-10-2018 CDG62_08495 320ab8eac14e12c353322fcd3c31aabd 188 Gene3D G3DSA:2.60.450.10 34 181 1.1E-42 T 23-10-2018 CDG62_08495 320ab8eac14e12c353322fcd3c31aabd 188 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 32 177 5.9E-39 T 23-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CDG62_08495 320ab8eac14e12c353322fcd3c31aabd 188 Pfam PF03968 OstA-like protein 44 153 8.6E-27 T 23-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal CDG62_08495 320ab8eac14e12c353322fcd3c31aabd 188 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 15 178 23.344 T 23-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CDG62_16035 d317aa7005831fbab54d78cf20a63886 105 Gene3D G3DSA:1.10.3730.20 1 105 1.0E-32 T 23-10-2018 CDG62_16035 d317aa7005831fbab54d78cf20a63886 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.4E-29 T 23-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CDG62_16035 d317aa7005831fbab54d78cf20a63886 105 SUPERFAMILY SSF103481 6 104 1.24E-21 T 23-10-2018 CDG62_05475 2ac21ef5b91f379ad8f336fd69833333 203 SUPERFAMILY SSF53448 4 202 2.53E-50 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_05475 2ac21ef5b91f379ad8f336fd69833333 203 Pfam PF00535 Glycosyl transferase family 2 7 148 1.5E-31 T 23-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CDG62_05475 2ac21ef5b91f379ad8f336fd69833333 203 Gene3D G3DSA:3.90.550.10 1 203 1.4E-58 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_15000 c7346fcd591739ac78e57568095a99e9 497 Pfam PF04575 Protein of unknown function (DUF560) 197 497 1.2E-47 T 23-10-2018 IPR007655 Protein of unknown function DUF560 CDG62_15000 c7346fcd591739ac78e57568095a99e9 497 SUPERFAMILY SSF48452 79 168 1.39E-10 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_15000 c7346fcd591739ac78e57568095a99e9 497 Pfam PF14559 Tetratricopeptide repeat 118 166 9.7E-6 T 23-10-2018 CDG62_15000 c7346fcd591739ac78e57568095a99e9 497 Gene3D G3DSA:1.25.40.10 61 200 4.8E-13 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_10365 0bbc11d3b59b19324b1a83ab37c01bd8 294 Pfam PF03466 LysR substrate binding domain 90 291 5.1E-16 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_10365 0bbc11d3b59b19324b1a83ab37c01bd8 294 SUPERFAMILY SSF53850 90 292 1.81E-20 T 23-10-2018 CDG62_10365 0bbc11d3b59b19324b1a83ab37c01bd8 294 SUPERFAMILY SSF46785 4 89 8.84E-17 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_10365 0bbc11d3b59b19324b1a83ab37c01bd8 294 Gene3D G3DSA:1.10.10.10 1 87 1.7E-18 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_10365 0bbc11d3b59b19324b1a83ab37c01bd8 294 Gene3D G3DSA:3.40.190.290 95 283 1.3E-24 T 23-10-2018 CDG62_10365 0bbc11d3b59b19324b1a83ab37c01bd8 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 1.2E-13 T 23-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CDG62_05415 451cf8e600157d20bec3c4b0d9bc141e 291 Pfam PF14305 TupA-like ATPgrasp 45 289 4.8E-52 T 23-10-2018 IPR029465 TupA-like ATPgrasp protein CDG62_12535 12df86fa7d0f03faf9623ceae9b03ef3 192 Gene3D G3DSA:1.10.530.40 31 192 7.2E-54 T 23-10-2018 CDG62_12535 12df86fa7d0f03faf9623ceae9b03ef3 192 SUPERFAMILY SSF53955 42 192 9.72E-50 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG62_12535 12df86fa7d0f03faf9623ceae9b03ef3 192 Pfam PF00959 Phage lysozyme 74 185 9.9E-22 T 23-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CDG62_16570 3e73c5c253cf59c5820d39ae09634abb 128 SUPERFAMILY SSF140931 25 107 2.49E-7 T 23-10-2018 IPR036597 Fido-like domain superfamily CDG62_16570 3e73c5c253cf59c5820d39ae09634abb 128 Pfam PF02661 Fic/DOC family 8 84 7.5E-9 T 23-10-2018 IPR003812 Fido domain CDG62_16570 3e73c5c253cf59c5820d39ae09634abb 128 Gene3D G3DSA:1.20.120.1870 1 127 1.0E-34 T 23-10-2018 CDG62_16570 3e73c5c253cf59c5820d39ae09634abb 128 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 9 108 1.5E-18 T 23-10-2018 IPR006440 Death on curing protein GO:0016301 CDG62_15170 5457b0d2e7740e71779a17ab60951e46 293 Pfam PF10670 Domain of unknown function (DUF4198) 41 267 3.2E-22 T 23-10-2018 IPR019613 Protein of unknown function DUF4198 CDG62_12700 f549a8964d10bfd930a29388af061174 184 Gene3D G3DSA:1.20.144.10 88 184 1.7E-15 T 23-10-2018 CDG62_12700 f549a8964d10bfd930a29388af061174 184 SMART SM00014 57 166 9.1E-14 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG62_12700 f549a8964d10bfd930a29388af061174 184 Pfam PF01569 PAP2 superfamily 66 164 1.8E-13 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG62_12700 f549a8964d10bfd930a29388af061174 184 SUPERFAMILY SSF48317 4 174 3.92E-30 T 23-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDG62_00815 8f30ba99cc070a120dd5a9eb62311cf9 1173 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 485 491 - T 23-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CDG62_00815 8f30ba99cc070a120dd5a9eb62311cf9 1173 SUPERFAMILY SSF53335 75 652 1.26E-68 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_00815 8f30ba99cc070a120dd5a9eb62311cf9 1173 Pfam PF07669 Eco57I restriction-modification methylase 481 574 3.3E-6 T 23-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 CDG62_00815 8f30ba99cc070a120dd5a9eb62311cf9 1173 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 237 253 6.5E-9 T 23-10-2018 CDG62_00815 8f30ba99cc070a120dd5a9eb62311cf9 1173 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 482 494 6.5E-9 T 23-10-2018 CDG62_00815 8f30ba99cc070a120dd5a9eb62311cf9 1173 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 310 324 6.5E-9 T 23-10-2018 CDG62_12210 448229d14f08e965970a3a295bf026a0 318 Gene3D G3DSA:3.55.50.30 241 317 2.3E-6 T 23-10-2018 CDG62_12210 448229d14f08e965970a3a295bf026a0 318 Gene3D G3DSA:2.60.120.1440 105 240 3.9E-24 T 23-10-2018 CDG62_12210 448229d14f08e965970a3a295bf026a0 318 Pfam PF16220 Domain of unknown function (DUF4880) 13 54 1.6E-12 T 23-10-2018 IPR032623 FecR, N-terminal CDG62_12210 448229d14f08e965970a3a295bf026a0 318 Pfam PF04773 FecR protein 111 204 4.1E-18 T 23-10-2018 IPR006860 FecR protein CDG62_12210 448229d14f08e965970a3a295bf026a0 318 PIRSF PIRSF018266 2 318 1.1E-74 T 23-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CDG62_01230 fc4ef7c799d6468c54571114a7a87fae 360 SMART SM00530 8 65 5.9E-4 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_01230 fc4ef7c799d6468c54571114a7a87fae 360 SUPERFAMILY SSF47413 6 66 1.83E-8 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG62_01230 fc4ef7c799d6468c54571114a7a87fae 360 Gene3D G3DSA:1.10.260.40 7 103 6.1E-9 T 23-10-2018 CDG62_01230 fc4ef7c799d6468c54571114a7a87fae 360 Pfam PF06114 IrrE N-terminal-like domain 160 270 1.4E-20 T 23-10-2018 IPR010359 IrrE N-terminal-like domain CDG62_01230 fc4ef7c799d6468c54571114a7a87fae 360 Pfam PF01381 Helix-turn-helix 13 63 3.2E-7 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_00975 48276834cc35dd677f47db50b8cf7497 118 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 105 5.5E-24 T 23-10-2018 IPR009241 Toxin HigB-like CDG62_06980 79f743aba4eb5c1dbb5587d08761d48a 308 PIRSF PIRSF016660 1 306 2.8E-132 T 23-10-2018 IPR008526 Inner membrane protein YedI CDG62_06980 79f743aba4eb5c1dbb5587d08761d48a 308 Pfam PF05661 Protein of unknown function (DUF808) 3 294 9.1E-119 T 23-10-2018 IPR008526 Inner membrane protein YedI CDG62_09420 cf825fb2138db87b1199cd4565992f5f 92 SUPERFAMILY SSF54975 1 90 1.16E-20 T 23-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CDG62_09420 cf825fb2138db87b1199cd4565992f5f 92 Gene3D G3DSA:3.30.70.100 1 91 5.6E-22 T 23-10-2018 CDG62_09420 cf825fb2138db87b1199cd4565992f5f 92 Pfam PF00708 Acylphosphatase 5 89 2.5E-19 T 23-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CDG62_07245 62aefb02731764c1bd73673d06bf98a2 156 Pfam PF11220 Protein of unknown function (DUF3015) 20 155 8.5E-38 T 23-10-2018 IPR021383 Protein of unknown function DUF3015 CDG62_10210 9f0a14246210d77bdb2723c5a3570f78 166 Gene3D G3DSA:3.40.140.10 1 165 1.7E-54 T 23-10-2018 CDG62_10210 9f0a14246210d77bdb2723c5a3570f78 166 SUPERFAMILY SSF53927 5 157 6.36E-50 T 23-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 CDG62_10210 9f0a14246210d77bdb2723c5a3570f78 166 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 95 - T 23-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CDG62_10210 9f0a14246210d77bdb2723c5a3570f78 166 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 12 154 40.527 T 23-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CDG62_10210 9f0a14246210d77bdb2723c5a3570f78 166 Pfam PF14437 MafB19-like deaminase 7 154 6.9E-33 T 23-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CDG62_01250 8c9f26c944a15b013b0bf407463e8a66 153 Gene3D G3DSA:3.40.140.10 1 147 1.6E-11 T 23-10-2018 CDG62_01250 8c9f26c944a15b013b0bf407463e8a66 153 Pfam PF14464 Prokaryotic homologs of the JAB domain 12 123 1.7E-11 T 23-10-2018 IPR028090 JAB domain, prokaryotic CDG62_01250 8c9f26c944a15b013b0bf407463e8a66 153 SUPERFAMILY SSF102712 3 107 4.58E-11 T 23-10-2018 CDG62_00315 9f3138e3f259d749cd0dda7a4c6e8e4c 235 Gene3D G3DSA:3.40.50.1390 1 158 1.3E-43 T 23-10-2018 CDG62_00315 9f3138e3f259d749cd0dda7a4c6e8e4c 235 ProSitePatterns PS00397 Site-specific recombinases active site. 10 18 - T 23-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CDG62_00315 9f3138e3f259d749cd0dda7a4c6e8e4c 235 SMART SM00857 7 154 2.9E-50 T 23-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDG62_00315 9f3138e3f259d749cd0dda7a4c6e8e4c 235 Pfam PF07508 Recombinase 182 224 1.4E-5 T 23-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CDG62_00315 9f3138e3f259d749cd0dda7a4c6e8e4c 235 SUPERFAMILY SSF53041 7 150 1.96E-35 T 23-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 CDG62_00315 9f3138e3f259d749cd0dda7a4c6e8e4c 235 Pfam PF00239 Resolvase, N terminal domain 7 150 3.2E-38 T 23-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CDG62_05115 2dd7d6f725513abf1d27a8d85d569558 166 SUPERFAMILY SSF54637 15 158 3.09E-19 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_05115 2dd7d6f725513abf1d27a8d85d569558 166 Gene3D G3DSA:3.10.129.10 10 159 1.4E-35 T 23-10-2018 CDG62_05115 2dd7d6f725513abf1d27a8d85d569558 166 Pfam PF14539 Domain of unknown function (DUF4442) 23 156 1.6E-32 T 23-10-2018 IPR027961 Protein of unknown function DUF4442 CDG62_00825 79f153e274843fe0dc09600db89c4edb 191 Pfam PF08747 Domain of unknown function (DUF1788) 68 189 9.7E-39 T 23-10-2018 IPR014858 Protein of unknown function DUF1788 CDG62_16095 8d96057a4ee6991cd51f9e961d59c393 272 Pfam PF04445 Putative SAM-dependent methyltransferase 78 266 2.9E-47 T 23-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CDG62_16095 8d96057a4ee6991cd51f9e961d59c393 272 Gene3D G3DSA:3.40.50.150 71 272 9.4E-58 T 23-10-2018 CDG62_16095 8d96057a4ee6991cd51f9e961d59c393 272 SUPERFAMILY SSF53335 31 270 1.63E-49 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_16095 8d96057a4ee6991cd51f9e961d59c393 272 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 4 268 26.382 T 23-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CDG62_18715 3852faebe0c1a3dd9851ae908bff984a 145 SUPERFAMILY SSF54637 5 124 9.88E-20 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_18715 3852faebe0c1a3dd9851ae908bff984a 145 PIRSF PIRSF020565 1 144 8.5E-37 T 23-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted CDG62_18715 3852faebe0c1a3dd9851ae908bff984a 145 Gene3D G3DSA:3.10.129.10 2 133 2.2E-13 T 23-10-2018 CDG62_09560 0e04c7e01b2ae8bf9e63fbd444d50486 136 Pfam PF04480 Protein of unknown function (DUF559) 33 130 3.3E-5 T 23-10-2018 IPR007569 Protein of unknown function DUF559 CDG62_09560 0e04c7e01b2ae8bf9e63fbd444d50486 136 Gene3D G3DSA:3.40.960.10 30 134 5.2E-12 T 23-10-2018 CDG62_15055 381b7e45273f38b2e3dcd73486384739 503 Pfam PF00245 Alkaline phosphatase 35 501 7.3E-96 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG62_15055 381b7e45273f38b2e3dcd73486384739 503 Gene3D G3DSA:3.40.720.10 16 503 7.2E-129 T 23-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 CDG62_15055 381b7e45273f38b2e3dcd73486384739 503 SUPERFAMILY SSF53649 12 503 5.23E-114 T 23-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 CDG62_15055 381b7e45273f38b2e3dcd73486384739 503 SMART SM00098 35 502 5.4E-74 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG62_15055 381b7e45273f38b2e3dcd73486384739 503 PRINTS PR00113 Alkaline phosphatase signature 34 54 1.1E-18 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG62_15055 381b7e45273f38b2e3dcd73486384739 503 PRINTS PR00113 Alkaline phosphatase signature 84 99 1.1E-18 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG62_15055 381b7e45273f38b2e3dcd73486384739 503 PRINTS PR00113 Alkaline phosphatase signature 293 322 1.1E-18 T 23-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CDG62_07695 7ef12ed76a48a81c82ecc01b1bc296eb 417 Gene3D G3DSA:3.90.1150.10 9 393 8.7E-186 T 23-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 CDG62_07695 7ef12ed76a48a81c82ecc01b1bc296eb 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 23-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDG62_07695 7ef12ed76a48a81c82ecc01b1bc296eb 417 Pfam PF00464 Serine hydroxymethyltransferase 8 385 1.5E-182 T 23-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDG62_07695 7ef12ed76a48a81c82ecc01b1bc296eb 417 PIRSF PIRSF000412 2 417 3.9E-169 T 23-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDG62_07695 7ef12ed76a48a81c82ecc01b1bc296eb 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 6 416 53.107 T 23-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CDG62_07695 7ef12ed76a48a81c82ecc01b1bc296eb 417 SUPERFAMILY SSF53383 4 415 3.58E-183 T 23-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase CDG62_07695 7ef12ed76a48a81c82ecc01b1bc296eb 417 Gene3D G3DSA:3.40.640.10 36 288 8.7E-186 T 23-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 CDG62_09390 8d1248954c6f2aaf9474bce18e1df976 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 525 3.2E-10 T 23-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain CDG62_09390 8d1248954c6f2aaf9474bce18e1df976 545 SUPERFAMILY SSF56801 10 537 4.19E-126 T 23-10-2018 CDG62_09390 8d1248954c6f2aaf9474bce18e1df976 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 23-10-2018 IPR020845 AMP-binding, conserved site CDG62_09390 8d1248954c6f2aaf9474bce18e1df976 545 Gene3D G3DSA:3.30.300.310 437 539 1.8E-28 T 23-10-2018 CDG62_09390 8d1248954c6f2aaf9474bce18e1df976 545 Pfam PF00501 AMP-binding enzyme 17 441 6.9E-83 T 23-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 CDG62_09390 8d1248954c6f2aaf9474bce18e1df976 545 Gene3D G3DSA:3.40.50.12780 3 436 8.9E-114 T 23-10-2018 CDG62_03315 f32ab14d62f8956b298b914bbe1d2014 283 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 55 281 6.2E-66 T 23-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CDG62_03315 f32ab14d62f8956b298b914bbe1d2014 283 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 16 283 42.28 T 23-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CDG62_03315 f32ab14d62f8956b298b914bbe1d2014 283 Pfam PF02666 Phosphatidylserine decarboxylase 69 280 4.9E-58 T 23-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CDG62_11110 3f0b0c360fd545d38216d71b1b050102 236 Gene3D G3DSA:3.40.190.10 2 200 1.0E-46 T 23-10-2018 CDG62_11110 3f0b0c360fd545d38216d71b1b050102 236 Pfam PF03466 LysR substrate binding domain 2 202 1.1E-25 T 23-10-2018 IPR005119 LysR, substrate-binding CDG62_11110 3f0b0c360fd545d38216d71b1b050102 236 Gene3D G3DSA:3.40.190.10 72 175 1.0E-46 T 23-10-2018 CDG62_11110 3f0b0c360fd545d38216d71b1b050102 236 SUPERFAMILY SSF53850 2 203 2.71E-30 T 23-10-2018 CDG62_06240 540074ac09ddae71d093746ef749a550 543 Pfam PF03929 PepSY-associated TM region 14 381 1.0E-55 T 23-10-2018 IPR005625 PepSY-associated TM protein CDG62_10905 78e57148d6d34401cea3f5d3be3f74fd 384 PIRSF PIRSF004925 1 383 4.0E-110 T 23-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter CDG62_10905 78e57148d6d34401cea3f5d3be3f74fd 384 Pfam PF12832 MFS_1 like family 9 361 2.3E-82 T 23-10-2018 IPR024989 Major facilitator superfamily associated domain CDG62_10905 78e57148d6d34401cea3f5d3be3f74fd 384 SUPERFAMILY SSF103473 10 382 1.83E-45 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_10905 78e57148d6d34401cea3f5d3be3f74fd 384 Gene3D G3DSA:1.20.1250.20 192 383 9.2E-34 T 23-10-2018 CDG62_10905 78e57148d6d34401cea3f5d3be3f74fd 384 Gene3D G3DSA:1.20.1250.20 9 191 1.8E-22 T 23-10-2018 CDG62_18280 2cab8e5780155dc719886b3e0af88052 448 Gene3D G3DSA:2.40.160.10 11 448 2.0E-133 T 23-10-2018 IPR023614 Porin domain superfamily CDG62_18280 2cab8e5780155dc719886b3e0af88052 448 Pfam PF03573 outer membrane porin, OprD family 30 446 3.4E-109 T 23-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 CDG62_15400 e85dff609c5821ff1ec96d0f72041353 253 Pfam PF03818 Malonate/sodium symporter MadM subunit 3 60 6.5E-23 T 23-10-2018 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal CDG62_15400 e85dff609c5821ff1ec96d0f72041353 253 TIGRFAM TIGR00808 malonate_madM: malonate transporter, MadM subunit 1 253 1.8E-134 T 23-10-2018 IPR004691 Malonate/sodium symporter MadM subunit GO:0044668 CDG62_05200 2864c80d8de2a0024a882e46ac944650 244 Pfam PF12811 Bax inhibitor 1 like 5 241 2.9E-62 T 23-10-2018 IPR010539 Protein of unknown function UCP009160 CDG62_05200 2864c80d8de2a0024a882e46ac944650 244 PIRSF PIRSF009160 1 244 3.2E-76 T 23-10-2018 IPR010539 Protein of unknown function UCP009160 CDG62_03085 abec00287a627675051260efb006c255 432 SUPERFAMILY SSF52833 241 420 1.95E-5 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_15925 b4a8e6b1259c15b87cea12ae3433c556 293 PIRSF PIRSF007580 1 293 6.7E-70 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG62_15925 b4a8e6b1259c15b87cea12ae3433c556 293 Pfam PF10118 Predicted metal-dependent hydrolase 17 278 6.3E-77 T 23-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 CDG62_10805 a1df4a0d5a8127d9e6d7747e095c673a 220 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 214 1.9E-26 T 23-10-2018 IPR018635 Uncharacterised protein family UPF0319 CDG62_18095 30c8d2746eadc5d0d2c607afa6d2a542 630 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 141 591 101.217 T 23-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDG62_18095 30c8d2746eadc5d0d2c607afa6d2a542 630 Gene3D G3DSA:3.20.20.540 210 522 2.8E-157 T 23-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDG62_18095 30c8d2746eadc5d0d2c607afa6d2a542 630 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 141 589 4.2E-221 T 23-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDG62_18095 30c8d2746eadc5d0d2c607afa6d2a542 630 Pfam PF13667 ThiC-associated domain 26 102 1.9E-32 T 23-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDG62_18095 30c8d2746eadc5d0d2c607afa6d2a542 630 Pfam PF01964 Radical SAM ThiC family 142 586 2.0E-206 T 23-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CDG62_05105 452a83a1d29d5490fb50bc8de650388f 140 Pfam PF03061 Thioesterase superfamily 27 99 5.1E-18 T 23-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CDG62_05105 452a83a1d29d5490fb50bc8de650388f 140 Gene3D G3DSA:3.10.129.10 2 139 5.1E-37 T 23-10-2018 CDG62_05105 452a83a1d29d5490fb50bc8de650388f 140 SUPERFAMILY SSF54637 8 132 1.14E-34 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_08325 9fefe00d0e7d4066f565a6e42958b6d9 274 SMART SM00220 21 269 3.3E-8 T 23-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDG62_08325 9fefe00d0e7d4066f565a6e42958b6d9 274 SUPERFAMILY SSF56112 39 262 2.18E-32 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_08325 9fefe00d0e7d4066f565a6e42958b6d9 274 Pfam PF00069 Protein kinase domain 107 219 1.2E-22 T 23-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 CDG62_08325 9fefe00d0e7d4066f565a6e42958b6d9 274 Gene3D G3DSA:1.10.510.10 93 272 5.6E-32 T 23-10-2018 CDG62_01240 189fe83bb3eb2c89f8905472e52ac0ac 337 SUPERFAMILY SSF81301 1 130 5.89E-5 T 23-10-2018 CDG62_01240 189fe83bb3eb2c89f8905472e52ac0ac 337 Gene3D G3DSA:3.30.460.10 21 158 6.3E-7 T 23-10-2018 CDG62_13120 b9e1fff601514354cedc05c4cc889be8 601 TIGRFAM TIGR04214 CSLREA_Nterm: CSLREA domain 23 47 9.8E-9 T 23-10-2018 IPR026457 CSLREA domain CDG62_13120 b9e1fff601514354cedc05c4cc889be8 601 SUPERFAMILY SSF51126 32 447 3.14E-10 T 23-10-2018 IPR011050 Pectin lyase fold/virulence factor CDG62_13120 b9e1fff601514354cedc05c4cc889be8 601 TIGRFAM TIGR04212 GlyGly_RbtA: rhombotarget A 1 600 3.9E-272 T 23-10-2018 IPR026454 Rhombotarget A CDG62_13120 b9e1fff601514354cedc05c4cc889be8 601 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 580 601 0.0026 T 23-10-2018 IPR020008 GlyGly-CTERM domain CDG62_13155 24e44117afd76557381ac9c29587bb27 329 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 284 2.4E-41 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDG62_13155 24e44117afd76557381ac9c29587bb27 329 PIRSF PIRSF026649 2 291 2.2E-68 T 23-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CDG62_17025 84605cc5c667ea243efcc441fb7e1319 129 Pfam PF04266 ASCH domain 17 99 1.5E-6 T 23-10-2018 IPR007374 ASCH domain CDG62_17025 84605cc5c667ea243efcc441fb7e1319 129 SUPERFAMILY SSF88697 11 126 8.45E-14 T 23-10-2018 IPR015947 PUA-like superfamily CDG62_06755 e0f9b5ff2568a244f45e5c7ee5acdf89 594 Pfam PF09925 Predicted membrane protein (DUF2157) 12 117 3.1E-16 T 23-10-2018 IPR018677 Domain of unknown function DUF2157 CDG62_06755 e0f9b5ff2568a244f45e5c7ee5acdf89 594 Pfam PF14351 Domain of unknown function (DUF4401) 289 583 1.3E-15 T 23-10-2018 IPR025513 Domain of unknown function DUF4401 CDG62_04100 dfc6dd8e9c763242ff197135f4c63f63 267 Pfam PF10670 Domain of unknown function (DUF4198) 15 240 3.9E-20 T 23-10-2018 IPR019613 Protein of unknown function DUF4198 CDG62_13950 3b9c11a3b2420785971af3bae9b066aa 198 SUPERFAMILY SSF69593 28 147 3.79E-13 T 23-10-2018 CDG62_13950 3b9c11a3b2420785971af3bae9b066aa 198 Pfam PF01553 Acyltransferase 29 139 6.3E-10 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_13950 3b9c11a3b2420785971af3bae9b066aa 198 SMART SM00563 29 147 1.1E-17 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_15340 d49126f1aa6d3db28bfcd4124d60d9c5 156 SMART SM00972 97 153 1.9E-15 T 23-10-2018 IPR007893 Spore coat protein U CDG62_15340 d49126f1aa6d3db28bfcd4124d60d9c5 156 Pfam PF05229 Spore Coat Protein U domain 27 153 6.8E-26 T 23-10-2018 IPR007893 Spore coat protein U CDG62_00570 026ac2c75932bf18f9b130ec00b4676f 87 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 55 6.9E-10 T 23-10-2018 CDG62_00570 026ac2c75932bf18f9b130ec00b4676f 87 Gene3D G3DSA:1.10.1220.170 41 86 5.1E-15 T 23-10-2018 CDG62_00570 026ac2c75932bf18f9b130ec00b4676f 87 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 5.6E-17 T 23-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDG62_00570 026ac2c75932bf18f9b130ec00b4676f 87 Gene3D G3DSA:3.40.1620.10 1 40 2.6E-10 T 23-10-2018 CDG62_00570 026ac2c75932bf18f9b130ec00b4676f 87 SUPERFAMILY SSF143120 1 81 1.92E-24 T 23-10-2018 IPR036165 YefM-like superfamily CDG62_03435 72245a8d677365e9aae713737fd4b4fb 124 Gene3D G3DSA:3.30.160.100 4 106 2.0E-6 T 23-10-2018 IPR036567 Ribosome hibernation promotion factor-like CDG62_03435 72245a8d677365e9aae713737fd4b4fb 124 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 7 100 4.4E-9 T 23-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 CDG62_03435 72245a8d677365e9aae713737fd4b4fb 124 SUPERFAMILY SSF69754 1 95 2.75E-11 T 23-10-2018 IPR036567 Ribosome hibernation promotion factor-like CDG62_10920 9e5b9dc152ea3e0656a48ec349714617 359 Pfam PF10005 zinc-ribbon domain 4 97 3.0E-25 T 23-10-2018 IPR011201 Zinc-ribbon domain, bacteria CDG62_10920 9e5b9dc152ea3e0656a48ec349714617 359 Pfam PF15887 Putative zinc-binding metallo-peptidase 103 347 9.7E-96 T 23-10-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase CDG62_10920 9e5b9dc152ea3e0656a48ec349714617 359 PIRSF PIRSF012641 1 359 1.2E-123 T 23-10-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase CDG62_07640 16d058ea8768930646cf7946c5bcbeff 258 Gene3D G3DSA:3.40.225.10 8 258 1.9E-76 T 23-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CDG62_07640 16d058ea8768930646cf7946c5bcbeff 258 SUPERFAMILY SSF53639 18 225 7.06E-59 T 23-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CDG62_07640 16d058ea8768930646cf7946c5bcbeff 258 SMART SM01007 23 205 1.4E-58 T 23-10-2018 IPR001303 Class II aldolase/adducin N-terminal CDG62_07640 16d058ea8768930646cf7946c5bcbeff 258 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 205 5.2E-46 T 23-10-2018 IPR001303 Class II aldolase/adducin N-terminal CDG62_11035 40145bcc6c75340674ed443b3c531577 273 Pfam PF00561 alpha/beta hydrolase fold 21 244 1.7E-22 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_11035 40145bcc6c75340674ed443b3c531577 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 1.8E-8 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_11035 40145bcc6c75340674ed443b3c531577 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 1.8E-8 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_11035 40145bcc6c75340674ed443b3c531577 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 1.8E-8 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_11035 40145bcc6c75340674ed443b3c531577 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 216 1.8E-8 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_11035 40145bcc6c75340674ed443b3c531577 273 Gene3D G3DSA:3.40.50.1820 2 263 1.5E-57 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_11035 40145bcc6c75340674ed443b3c531577 273 SUPERFAMILY SSF53474 1 257 9.67E-63 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_03150 1f39c4272b452d44659370d25bba1c2f 215 SUPERFAMILY SSF55961 26 201 2.08E-36 T 23-10-2018 CDG62_03150 1f39c4272b452d44659370d25bba1c2f 215 Gene3D G3DSA:3.30.530.20 23 209 4.4E-44 T 23-10-2018 IPR023393 START-like domain superfamily CDG62_03150 1f39c4272b452d44659370d25bba1c2f 215 Pfam PF01852 START domain 39 198 2.6E-7 T 23-10-2018 IPR002913 START domain GO:0008289 CDG62_03150 1f39c4272b452d44659370d25bba1c2f 215 PIRSF PIRSF039033 1 212 7.3E-41 T 23-10-2018 IPR028347 START domain-containing protein CDG62_11435 a2febfb899ada9f22e6f28e5eb730b73 197 Gene3D G3DSA:3.40.470.10 7 195 2.9E-20 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG62_11435 a2febfb899ada9f22e6f28e5eb730b73 197 SUPERFAMILY SSF52141 12 191 5.36E-19 T 23-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CDG62_14240 7d3d877c879af86fd17dcc5362aa2c05 406 SUPERFAMILY SSF103473 10 400 1.96E-52 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_14240 7d3d877c879af86fd17dcc5362aa2c05 406 Gene3D G3DSA:1.20.1250.20 22 206 2.1E-20 T 23-10-2018 CDG62_14240 7d3d877c879af86fd17dcc5362aa2c05 406 Gene3D G3DSA:1.20.1250.20 221 406 3.7E-17 T 23-10-2018 CDG62_14240 7d3d877c879af86fd17dcc5362aa2c05 406 Pfam PF07690 Major Facilitator Superfamily 32 245 3.1E-20 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_04490 ad936ea16f4a75fae36e1b78286c8e83 153 Pfam PF04657 Putative inner membrane exporter, YdcZ 11 149 2.6E-41 T 23-10-2018 IPR006750 Putative inner membrane exporter, YdcZ CDG62_09350 19e734fe8ac603345c03aa7b1166e8b1 117 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 8 112 1.2E-32 T 23-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CDG62_09350 19e734fe8ac603345c03aa7b1166e8b1 117 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 9 113 21.428 T 23-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CDG62_00750 08040241e1a8838ea792f9f179ecffb1 221 Pfam PF04970 Lecithin retinol acyltransferase 3 108 8.6E-27 T 23-10-2018 IPR007053 LRAT-like domain CDG62_15865 b7e22788aa4697cbdbe74454c9024a9d 310 SMART SM00563 94 236 4.1E-8 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_15865 b7e22788aa4697cbdbe74454c9024a9d 310 SUPERFAMILY SSF69593 91 303 2.22E-26 T 23-10-2018 CDG62_15865 b7e22788aa4697cbdbe74454c9024a9d 310 Pfam PF01553 Acyltransferase 87 221 3.9E-10 T 23-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 CDG62_17435 1ee3d5938d42cf6863dc91f8206a3d5a 203 PIRSF PIRSF029557 10 202 1.4E-42 T 23-10-2018 IPR010707 Protein of unknown function DUF1285 CDG62_17435 1ee3d5938d42cf6863dc91f8206a3d5a 203 Pfam PF06938 Protein of unknown function (DUF1285) 56 196 5.2E-46 T 23-10-2018 IPR010707 Protein of unknown function DUF1285 CDG62_17435 1ee3d5938d42cf6863dc91f8206a3d5a 203 Gene3D G3DSA:3.10.540.10 12 106 1.1E-31 T 23-10-2018 CDG62_13465 11d636bcb9cd1700a915c589444a7918 470 Gene3D G3DSA:1.20.1740.10 17 470 1.0E-65 T 23-10-2018 CDG62_13465 11d636bcb9cd1700a915c589444a7918 470 Pfam PF00324 Amino acid permease 25 460 1.1E-117 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG62_13465 11d636bcb9cd1700a915c589444a7918 470 ProSitePatterns PS00218 Amino acid permeases signature. 50 81 - T 23-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CDG62_13465 11d636bcb9cd1700a915c589444a7918 470 PIRSF PIRSF006060 2 470 1.6E-81 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_02745 e51dd566a57c1c93cd94280dddd3c012 93 SUPERFAMILY SSF47413 33 91 2.82E-10 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG62_02745 e51dd566a57c1c93cd94280dddd3c012 93 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 4 92 2.0E-37 T 23-10-2018 IPR014057 Uncharacterized protein HI1420 CDG62_02745 e51dd566a57c1c93cd94280dddd3c012 93 Pfam PF01381 Helix-turn-helix 47 91 2.3E-6 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_15120 c882a81cbc450611770cf09ec15b8491 209 Gene3D G3DSA:2.60.130.10 1 209 3.2E-86 T 23-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CDG62_15120 c882a81cbc450611770cf09ec15b8491 209 SUPERFAMILY SSF49482 8 209 5.49E-62 T 23-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CDG62_15120 c882a81cbc450611770cf09ec15b8491 209 Pfam PF00775 Dioxygenase 44 199 1.1E-19 T 23-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CDG62_15120 c882a81cbc450611770cf09ec15b8491 209 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 12 209 4.8E-83 T 23-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 CDG62_15120 c882a81cbc450611770cf09ec15b8491 209 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 55 83 - T 23-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CDG62_00505 9b21548d6634fa1898d94977c8809f4d 106 PIRSF PIRSF039032 1 105 2.4E-38 T 23-10-2018 IPR009387 Toxin HigB-2 CDG62_00505 9b21548d6634fa1898d94977c8809f4d 106 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 41 102 3.1E-12 T 23-10-2018 IPR009387 Toxin HigB-2 CDG62_04595 00d8e027ec98b30d744b56c3e94a4d53 337 Pfam PF01544 CorA-like Mg2+ transporter protein 27 332 1.5E-52 T 23-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CDG62_04595 00d8e027ec98b30d744b56c3e94a4d53 337 SUPERFAMILY SSF144083 272 335 3.92E-13 T 23-10-2018 CDG62_04595 00d8e027ec98b30d744b56c3e94a4d53 337 SUPERFAMILY SSF143865 2 274 5.75E-35 T 23-10-2018 CDG62_04595 00d8e027ec98b30d744b56c3e94a4d53 337 Gene3D G3DSA:1.20.58.340 261 337 4.7E-15 T 23-10-2018 CDG62_17605 d89036d1ba466ec91e642f2c02e5007b 500 Pfam PF13361 UvrD-like helicase C-terminal domain 425 477 1.6E-10 T 23-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CDG62_17605 d89036d1ba466ec91e642f2c02e5007b 500 Gene3D G3DSA:3.40.50.300 306 498 8.0E-13 T 23-10-2018 CDG62_17605 d89036d1ba466ec91e642f2c02e5007b 500 Pfam PF13245 AAA domain 13 252 4.1E-13 T 23-10-2018 CDG62_17605 d89036d1ba466ec91e642f2c02e5007b 500 SUPERFAMILY SSF52540 9 483 1.78E-47 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_02800 4e48bcb47b82985737e85e24abb3d7c2 280 ProSitePatterns PS00337 Beta-lactamase class-D active site. 81 91 - T 23-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 CDG62_02800 4e48bcb47b82985737e85e24abb3d7c2 280 Pfam PF00905 Penicillin binding protein transpeptidase domain 67 265 3.0E-32 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDG62_02800 4e48bcb47b82985737e85e24abb3d7c2 280 SUPERFAMILY SSF56601 55 272 8.28E-33 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG62_02800 4e48bcb47b82985737e85e24abb3d7c2 280 Gene3D G3DSA:3.40.710.10 29 277 5.2E-85 T 23-10-2018 CDG62_17405 c449d0d1a63d3b283f08bd23c30210b6 217 Pfam PF02390 Putative methyltransferase 23 162 3.7E-22 T 23-10-2018 CDG62_17405 c449d0d1a63d3b283f08bd23c30210b6 217 Gene3D G3DSA:3.40.50.150 3 193 1.8E-27 T 23-10-2018 CDG62_17405 c449d0d1a63d3b283f08bd23c30210b6 217 SUPERFAMILY SSF53335 18 158 9.46E-12 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_12175 49d6140ca44b348727da557040cd9b2a 191 Pfam PF02417 Chromate transporter 18 176 7.1E-29 T 23-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CDG62_04610 74f59c565a4d0ec23bb5668e42ebdafe 215 Gene3D G3DSA:3.40.50.2020 72 215 1.0E-13 T 23-10-2018 CDG62_04610 74f59c565a4d0ec23bb5668e42ebdafe 215 SUPERFAMILY SSF53271 54 212 7.87E-19 T 23-10-2018 IPR029057 Phosphoribosyltransferase-like CDG62_04610 74f59c565a4d0ec23bb5668e42ebdafe 215 Pfam PF00156 Phosphoribosyl transferase domain 118 212 1.8E-7 T 23-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CDG62_05455 9d9834167c2d62549029948b4d9a84a7 289 SUPERFAMILY SSF53448 2 288 5.18E-92 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_05455 9d9834167c2d62549029948b4d9a84a7 289 Gene3D G3DSA:3.90.550.10 1 289 1.1E-86 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_05455 9d9834167c2d62549029948b4d9a84a7 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 288 1.2E-155 T 23-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CDG62_05455 9d9834167c2d62549029948b4d9a84a7 289 Pfam PF00483 Nucleotidyl transferase 4 240 1.5E-74 T 23-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CDG62_05445 fdf037e5f593dd3e912fb2cd853e4db3 256 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 176 6.7E-38 T 23-10-2018 IPR002654 Glycosyl transferase, family 25 CDG62_04350 5877a23adbe7e72e0c1d123ad7a3793f 323 Pfam PF00561 alpha/beta hydrolase fold 43 156 5.7E-10 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_04350 5877a23adbe7e72e0c1d123ad7a3793f 323 Gene3D G3DSA:3.40.50.1820 35 323 1.7E-76 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_04350 5877a23adbe7e72e0c1d123ad7a3793f 323 SUPERFAMILY SSF53474 38 318 2.94E-36 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_04705 512ff148160243dcee093fd45099e264 106 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 20.707 T 23-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CDG62_04705 512ff148160243dcee093fd45099e264 106 SUPERFAMILY SSF54189 2 91 2.05E-30 T 23-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04705 512ff148160243dcee093fd45099e264 106 Pfam PF00276 Ribosomal protein L23 9 93 2.5E-29 T 23-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CDG62_04705 512ff148160243dcee093fd45099e264 106 Gene3D G3DSA:3.30.70.330 1 97 1.6E-32 T 23-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CDG62_18770 de24c67eaab8098ac729ec161e3c323b 184 Pfam PF04279 Intracellular septation protein A 18 154 1.8E-8 T 23-10-2018 IPR006008 Intracellular septation protein A GO:0016021 CDG62_14995 c7c326caaab259c9e0df866c7449e430 335 Gene3D G3DSA:2.60.120.1440 115 253 1.7E-22 T 23-10-2018 CDG62_14995 c7c326caaab259c9e0df866c7449e430 335 Pfam PF04773 FecR protein 121 212 2.5E-20 T 23-10-2018 IPR006860 FecR protein CDG62_14995 c7c326caaab259c9e0df866c7449e430 335 PIRSF PIRSF018266 1 323 1.4E-54 T 23-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CDG62_08515 843dcd6dae7752da820fbf283f5d86ed 280 SUPERFAMILY SSF52402 1 157 5.94E-13 T 23-10-2018 CDG62_08515 843dcd6dae7752da820fbf283f5d86ed 280 Pfam PF00582 Universal stress protein family 1 157 1.7E-7 T 23-10-2018 IPR006016 UspA CDG62_08515 843dcd6dae7752da820fbf283f5d86ed 280 Pfam PF00582 Universal stress protein family 212 280 8.9E-12 T 23-10-2018 IPR006016 UspA CDG62_08515 843dcd6dae7752da820fbf283f5d86ed 280 SUPERFAMILY SSF52402 165 280 3.85E-19 T 23-10-2018 CDG62_08515 843dcd6dae7752da820fbf283f5d86ed 280 Gene3D G3DSA:3.40.50.12370 2 280 2.4E-47 T 23-10-2018 CDG62_08515 843dcd6dae7752da820fbf283f5d86ed 280 PRINTS PR01438 Universal stress protein signature 1 11 1.7E-9 T 23-10-2018 IPR006015 Universal stress protein A CDG62_08515 843dcd6dae7752da820fbf283f5d86ed 280 PRINTS PR01438 Universal stress protein signature 258 280 1.7E-9 T 23-10-2018 IPR006015 Universal stress protein A CDG62_08515 843dcd6dae7752da820fbf283f5d86ed 280 PRINTS PR01438 Universal stress protein signature 240 252 1.7E-9 T 23-10-2018 IPR006015 Universal stress protein A CDG62_08665 e344ae34edc3795c32df96a4fea2bfaf 141 SUPERFAMILY SSF54975 1 133 1.37E-28 T 23-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CDG62_08665 e344ae34edc3795c32df96a4fea2bfaf 141 Gene3D G3DSA:3.30.70.3200 1 139 4.6E-30 T 23-10-2018 CDG62_08665 e344ae34edc3795c32df96a4fea2bfaf 141 Pfam PF04940 Sensors of blue-light using FAD 1 94 2.1E-23 T 23-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CDG62_08665 e344ae34edc3795c32df96a4fea2bfaf 141 SMART SM01034 1 95 4.8E-29 T 23-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CDG62_13670 dc635082c743284690c56a1bad97c7ef 377 SUPERFAMILY SSF52402 2 245 6.62E-56 T 23-10-2018 CDG62_13670 dc635082c743284690c56a1bad97c7ef 377 Gene3D G3DSA:2.40.30.10 284 375 8.4E-26 T 23-10-2018 CDG62_13670 dc635082c743284690c56a1bad97c7ef 377 Gene3D G3DSA:3.40.50.620 1 214 1.7E-90 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_13670 dc635082c743284690c56a1bad97c7ef 377 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 3 367 38.732 T 23-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CDG62_13670 dc635082c743284690c56a1bad97c7ef 377 Pfam PF03054 tRNA methyl transferase 3 366 4.4E-134 T 23-10-2018 CDG62_13670 dc635082c743284690c56a1bad97c7ef 377 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3 366 1.3E-133 T 23-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CDG62_13670 dc635082c743284690c56a1bad97c7ef 377 Gene3D G3DSA:2.30.30.280 215 282 2.2E-24 T 23-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 CDG62_14260 51a43147851ffd6dbe2c70415d47453d 169 Pfam PF10698 Protein of unknown function (DUF2505) 14 155 6.7E-9 T 23-10-2018 IPR019639 Protein of unknown function DUF2505 CDG62_00400 5ad690ef5a03ec07786e60ccc3c97ca6 554 SUPERFAMILY SSF50324 326 380 9.94E-6 T 23-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDG62_00400 5ad690ef5a03ec07786e60ccc3c97ca6 554 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 346 352 - T 23-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CDG62_04465 cff8c9b69f7d7ca1e32a875ba63add82 125 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 115 1.3E-23 T 23-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CDG62_04465 cff8c9b69f7d7ca1e32a875ba63add82 125 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 120 18.104 T 23-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CDG62_04465 cff8c9b69f7d7ca1e32a875ba63add82 125 TIGRFAM TIGR00494 crcB: protein CrcB 5 118 2.2E-28 T 23-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CDG62_04700 c8d935579fbe055939d21d33f1d8eef1 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 2 200 32.584 T 23-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04700 c8d935579fbe055939d21d33f1d8eef1 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 11 196 4.7E-71 T 23-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04700 c8d935579fbe055939d21d33f1d8eef1 200 SUPERFAMILY SSF52166 7 196 3.14E-68 T 23-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 CDG62_04700 c8d935579fbe055939d21d33f1d8eef1 200 Pfam PF00573 Ribosomal protein L4/L1 family 11 196 3.8E-61 T 23-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CDG62_04700 c8d935579fbe055939d21d33f1d8eef1 200 Gene3D G3DSA:3.40.1370.10 4 199 7.4E-65 T 23-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 CDG62_15025 1a61f03a8baf72577fdcdf27304d969d 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 209 8.7E-42 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CDG62_15025 1a61f03a8baf72577fdcdf27304d969d 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 8 227 36.199 T 23-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 CDG62_15025 1a61f03a8baf72577fdcdf27304d969d 232 TIGRFAM TIGR02796 tolQ: protein TolQ 9 222 1.3E-76 T 23-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 CDG62_09140 985dfdc93ba9bd183776d10f748e7ff0 137 Pfam PF12680 SnoaL-like domain 12 107 3.0E-8 T 23-10-2018 IPR037401 SnoaL-like domain CDG62_09140 985dfdc93ba9bd183776d10f748e7ff0 137 SUPERFAMILY SSF54427 7 114 7.76E-22 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG62_09140 985dfdc93ba9bd183776d10f748e7ff0 137 Gene3D G3DSA:3.10.450.50 2 134 1.4E-43 T 23-10-2018 CDG62_13315 ee428a895aba455f2a0a2d66ab45c7ce 118 SUPERFAMILY SSF103196 5 115 2.88E-5 T 23-10-2018 CDG62_05485 815cf73d9a56080be99436471e42cd9f 306 Pfam PF05704 Capsular polysaccharide synthesis protein 33 304 2.3E-67 T 23-10-2018 IPR008441 Capsular polysaccharide synthesis protein CDG62_05485 815cf73d9a56080be99436471e42cd9f 306 SUPERFAMILY SSF53448 16 288 7.87E-21 T 23-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases CDG62_05485 815cf73d9a56080be99436471e42cd9f 306 Gene3D G3DSA:3.90.550.20 70 305 2.2E-7 T 23-10-2018 CDG62_01475 a1003ebf42050687712246b6a89ed2f1 315 Pfam PF12293 Putative outer membrane core complex of type IVb secretion 62 291 2.9E-48 T 23-10-2018 IPR022073 Putative outer membrane core complex of type IVb secretion CDG62_10755 381556f3579cddf8f53161263bbcdbf6 143 Gene3D G3DSA:3.10.580.10 1 143 1.6E-43 T 23-10-2018 CDG62_10755 381556f3579cddf8f53161263bbcdbf6 143 SMART SM00116 15 62 6.9E-8 T 23-10-2018 IPR000644 CBS domain CDG62_10755 381556f3579cddf8f53161263bbcdbf6 143 SMART SM00116 80 127 1.5E-8 T 23-10-2018 IPR000644 CBS domain CDG62_10755 381556f3579cddf8f53161263bbcdbf6 143 Pfam PF00571 CBS domain 6 61 3.0E-11 T 23-10-2018 IPR000644 CBS domain CDG62_10755 381556f3579cddf8f53161263bbcdbf6 143 Pfam PF00571 CBS domain 73 127 4.7E-12 T 23-10-2018 IPR000644 CBS domain CDG62_10755 381556f3579cddf8f53161263bbcdbf6 143 SUPERFAMILY SSF54631 10 140 2.27E-32 T 23-10-2018 CDG62_04605 c1456b6bcd1fed6bd49342ef0896eedb 134 SUPERFAMILY SSF55811 4 128 1.35E-22 T 23-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 CDG62_04605 c1456b6bcd1fed6bd49342ef0896eedb 134 Gene3D G3DSA:3.90.79.10 1 129 2.3E-22 T 23-10-2018 CDG62_04605 c1456b6bcd1fed6bd49342ef0896eedb 134 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 23-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CDG62_04605 c1456b6bcd1fed6bd49342ef0896eedb 134 Pfam PF00293 NUDIX domain 6 124 2.3E-16 T 23-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CDG62_00615 5fd61c1b9e891c81263b56912033b98a 323 Gene3D G3DSA:3.30.930.30 2 209 5.5E-68 T 23-10-2018 CDG62_00615 5fd61c1b9e891c81263b56912033b98a 323 Pfam PF03389 MobA/MobL family 17 230 1.5E-59 T 23-10-2018 IPR005053 MobA/MobL protein CDG62_04125 77c631b9c2a35d123d02aea513e41bc1 332 Pfam PF13531 Bacterial extracellular solute-binding protein 43 282 1.6E-43 T 23-10-2018 CDG62_04125 77c631b9c2a35d123d02aea513e41bc1 332 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 50 62 - T 23-10-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site CDG62_04125 77c631b9c2a35d123d02aea513e41bc1 332 Gene3D G3DSA:3.40.190.10 116 327 8.2E-132 T 23-10-2018 CDG62_04125 77c631b9c2a35d123d02aea513e41bc1 332 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 23 328 1.9E-140 T 23-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CDG62_04125 77c631b9c2a35d123d02aea513e41bc1 332 SUPERFAMILY SSF53850 22 330 1.24E-83 T 23-10-2018 CDG62_04125 77c631b9c2a35d123d02aea513e41bc1 332 Gene3D G3DSA:3.40.190.10 29 297 8.2E-132 T 23-10-2018 CDG62_06750 f2a99cc38a1c25ab2dc0e6530143fa74 219 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 22 213 7.1E-79 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_06750 f2a99cc38a1c25ab2dc0e6530143fa74 219 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 16 218 40.575 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_06750 f2a99cc38a1c25ab2dc0e6530143fa74 219 Gene3D G3DSA:3.90.870.10 7 218 2.6E-84 T 23-10-2018 CDG62_06750 f2a99cc38a1c25ab2dc0e6530143fa74 219 SUPERFAMILY SSF55821 17 216 8.24E-81 T 23-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CDG62_06750 f2a99cc38a1c25ab2dc0e6530143fa74 219 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 19 214 3.3E-75 T 23-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_08580 4d87105af06560c09eb244fe9e8556e8 291 Gene3D G3DSA:3.40.190.10 42 272 1.6E-72 T 23-10-2018 CDG62_08580 4d87105af06560c09eb244fe9e8556e8 291 SUPERFAMILY SSF53850 40 281 4.86E-65 T 23-10-2018 CDG62_08580 4d87105af06560c09eb244fe9e8556e8 291 Gene3D G3DSA:3.40.190.10 120 231 1.6E-72 T 23-10-2018 CDG62_08580 4d87105af06560c09eb244fe9e8556e8 291 Pfam PF03180 NLPA lipoprotein 45 279 4.0E-64 T 23-10-2018 IPR004872 Lipoprotein NlpA family CDG62_09625 84a6a074448e5acd5a0b839bd2e31f5f 401 Pfam PF04233 Phage Mu protein F like protein 51 158 6.1E-23 T 23-10-2018 IPR006528 Phage head morphogenesis domain CDG62_09625 84a6a074448e5acd5a0b839bd2e31f5f 401 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 52 160 1.8E-16 T 23-10-2018 IPR006528 Phage head morphogenesis domain CDG62_18200 e0b9a93810f86bb4c7567a2fba5fbebe 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 1.9E-65 T 23-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CDG62_18200 e0b9a93810f86bb4c7567a2fba5fbebe 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 7 354 1.7E-103 T 23-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CDG62_03440 987f9fa6119849fe25d0e30d3be7e60d 180 Gene3D G3DSA:1.25.40.20 1 178 7.0E-13 T 23-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDG62_03440 987f9fa6119849fe25d0e30d3be7e60d 180 SUPERFAMILY SSF48403 78 139 3.37E-8 T 23-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily CDG62_12445 1d292c864f8e257a60c68520e98c4be0 121 Gene3D G3DSA:3.10.180.10 1 121 2.0E-40 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_12445 1d292c864f8e257a60c68520e98c4be0 121 SUPERFAMILY SSF54593 5 120 6.34E-26 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_00900 1d292c864f8e257a60c68520e98c4be0 121 Gene3D G3DSA:3.10.180.10 1 121 2.0E-40 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_00900 1d292c864f8e257a60c68520e98c4be0 121 SUPERFAMILY SSF54593 5 120 6.34E-26 T 23-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDG62_18430 9ffa90903053f8a1c184f2dc9a0cabad 377 Pfam PF02481 DNA recombination-mediator protein A 90 286 3.3E-71 T 23-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CDG62_18430 9ffa90903053f8a1c184f2dc9a0cabad 377 SUPERFAMILY SSF102405 90 295 4.27E-40 T 23-10-2018 CDG62_18430 9ffa90903053f8a1c184f2dc9a0cabad 377 Gene3D G3DSA:3.40.50.450 2 297 2.7E-88 T 23-10-2018 CDG62_18430 9ffa90903053f8a1c184f2dc9a0cabad 377 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 89 295 9.4E-71 T 23-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CDG62_06075 f549130be660ef8f7034a254083eaf9c 191 Pfam PF13548 Domain of unknown function (DUF4126) 7 180 1.4E-52 T 23-10-2018 IPR025196 Domain of unknown function DUF4126 CDG62_08800 c13f2ce3c1d900ad6247fc1293e35139 449 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 186 406 1.9E-8 T 23-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase CDG62_08800 c13f2ce3c1d900ad6247fc1293e35139 449 Gene3D G3DSA:3.60.10.10 176 447 1.7E-58 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDG62_08800 c13f2ce3c1d900ad6247fc1293e35139 449 SUPERFAMILY SSF56219 180 445 6.28E-55 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDG62_07500 8180b50068b4aaa8ae60e6b72249f7f6 318 SUPERFAMILY SSF51197 31 318 2.7E-61 T 23-10-2018 CDG62_07500 8180b50068b4aaa8ae60e6b72249f7f6 318 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 33 310 4.1E-46 T 23-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 CDG62_07500 8180b50068b4aaa8ae60e6b72249f7f6 318 Gene3D G3DSA:3.60.130.10 19 318 1.5E-66 T 23-10-2018 CDG62_07980 ddbbd174f46e3d33a84c5a4119bd705d 99 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 95 1.3E-16 T 23-10-2018 IPR008407 Branched-chain amino acid transport, AzlD CDG62_04240 c3df0e80cc47ad18053eb82d9fbdf19b 186 Gene3D G3DSA:3.10.310.50 34 182 2.5E-42 T 23-10-2018 CDG62_04240 c3df0e80cc47ad18053eb82d9fbdf19b 186 Pfam PF04536 TPM domain 39 161 4.2E-14 T 23-10-2018 IPR007621 TPM domain CDG62_08590 e75f0c1ab1214ea0fd2655186f37bfe7 362 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 36 229 1.1E-30 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG62_08590 e75f0c1ab1214ea0fd2655186f37bfe7 362 SMART SM00342 273 355 5.6E-15 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_08590 e75f0c1ab1214ea0fd2655186f37bfe7 362 Pfam PF12833 Helix-turn-helix domain 279 355 3.3E-15 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_08590 e75f0c1ab1214ea0fd2655186f37bfe7 362 SUPERFAMILY SSF46689 309 356 1.43E-8 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_08590 e75f0c1ab1214ea0fd2655186f37bfe7 362 Gene3D G3DSA:1.10.10.60 251 359 7.9E-21 T 23-10-2018 CDG62_17410 164d6c40802064d223c2119523c183db 57 Gene3D G3DSA:3.30.50.10 2 57 3.1E-21 T 23-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 CDG62_17410 164d6c40802064d223c2119523c183db 57 SUPERFAMILY SSF57716 2 55 3.85E-19 T 23-10-2018 CDG62_17410 164d6c40802064d223c2119523c183db 57 Pfam PF03884 DNA gyrase inhibitor YacG 6 54 2.2E-22 T 23-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CDG62_17410 164d6c40802064d223c2119523c183db 57 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 57 18.038 T 23-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CDG62_12220 4313cdb843d758b21b64f64ce03a775e 195 SUPERFAMILY SSF55729 6 179 4.05E-40 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_12220 4313cdb843d758b21b64f64ce03a775e 195 Pfam PF13302 Acetyltransferase (GNAT) domain 13 153 7.9E-16 T 23-10-2018 IPR000182 GNAT domain CDG62_12220 4313cdb843d758b21b64f64ce03a775e 195 Gene3D G3DSA:3.40.630.30 1 194 1.1E-43 T 23-10-2018 CDG62_08095 ba6ed445ef33c1b03a58dcfb533ce9b1 234 Gene3D G3DSA:3.40.1080.10 1 228 2.7E-98 T 23-10-2018 CDG62_08095 ba6ed445ef33c1b03a58dcfb533ce9b1 234 SMART SM00882 6 218 1.9E-92 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_08095 ba6ed445ef33c1b03a58dcfb533ce9b1 234 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 218 2.2E-80 T 23-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CDG62_08095 ba6ed445ef33c1b03a58dcfb533ce9b1 234 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 19 34 - T 23-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 CDG62_08095 ba6ed445ef33c1b03a58dcfb533ce9b1 234 Pfam PF01144 Coenzyme A transferase 7 218 7.2E-81 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_08095 ba6ed445ef33c1b03a58dcfb533ce9b1 234 SUPERFAMILY SSF100950 2 228 5.02E-88 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG62_15285 6da8f541dc9dc873cfce82e608adf81c 308 Pfam PF04982 HPP family 41 146 4.5E-6 T 23-10-2018 IPR007065 HPP CDG62_02215 33bad8bb2593aa1a6941550b3b73d30d 162 SUPERFAMILY SSF55068 3 159 1.96E-66 T 23-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_02215 33bad8bb2593aa1a6941550b3b73d30d 162 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 162 36.381 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_02215 33bad8bb2593aa1a6941550b3b73d30d 162 Pfam PF01625 Peptide methionine sulfoxide reductase 6 156 3.8E-62 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_02215 33bad8bb2593aa1a6941550b3b73d30d 162 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 156 8.7E-60 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_02215 33bad8bb2593aa1a6941550b3b73d30d 162 Gene3D G3DSA:3.30.1060.10 1 161 1.6E-67 T 23-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_03215 85695354eaca5c8214552b240a524c25 204 Pfam PF01810 LysE type translocator 15 189 4.0E-14 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_14100 c612b5dad483daf4a22cd199011f1e23 508 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 22 507 43.63 T 23-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG62_14100 c612b5dad483daf4a22cd199011f1e23 508 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 18 506 3.2E-199 T 23-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG62_14100 c612b5dad483daf4a22cd199011f1e23 508 Pfam PF01336 OB-fold nucleic acid binding domain 75 148 1.0E-10 T 23-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CDG62_14100 c612b5dad483daf4a22cd199011f1e23 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 389 405 4.6E-38 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG62_14100 c612b5dad483daf4a22cd199011f1e23 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 246 259 4.6E-38 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG62_14100 c612b5dad483daf4a22cd199011f1e23 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 201 211 4.6E-38 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG62_14100 c612b5dad483daf4a22cd199011f1e23 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 217 233 4.6E-38 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG62_14100 c612b5dad483daf4a22cd199011f1e23 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 264 281 4.6E-38 T 23-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CDG62_14100 c612b5dad483daf4a22cd199011f1e23 508 SUPERFAMILY SSF55681 164 505 5.36E-114 T 23-10-2018 CDG62_14100 c612b5dad483daf4a22cd199011f1e23 508 Pfam PF00152 tRNA synthetases class II (D, K and N) 165 504 6.3E-79 T 23-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CDG62_14100 c612b5dad483daf4a22cd199011f1e23 508 SUPERFAMILY SSF50249 15 157 2.01E-33 T 23-10-2018 IPR012340 Nucleic acid-binding, OB-fold CDG62_14100 c612b5dad483daf4a22cd199011f1e23 508 Gene3D G3DSA:2.40.50.140 8 159 1.6E-34 T 23-10-2018 CDG62_14100 c612b5dad483daf4a22cd199011f1e23 508 Gene3D G3DSA:3.30.930.10 160 508 4.9E-127 T 23-10-2018 CDG62_02945 5e27b253490e13d86742c9021bf81c7f 274 Pfam PF00905 Penicillin binding protein transpeptidase domain 64 266 3.1E-31 T 23-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CDG62_02945 5e27b253490e13d86742c9021bf81c7f 274 Gene3D G3DSA:3.40.710.10 25 274 3.0E-85 T 23-10-2018 CDG62_02945 5e27b253490e13d86742c9021bf81c7f 274 SUPERFAMILY SSF56601 37 246 3.81E-34 T 23-10-2018 IPR012338 Beta-lactamase/transpeptidase-like CDG62_11325 3695e22550a6e9fee9a2face9438ba56 249 Hamap MF_00830 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [rutB]. 17 244 61.089 T 23-10-2018 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110 CDG62_11325 3695e22550a6e9fee9a2face9438ba56 249 TIGRFAM TIGR03614 RutB: pyrimidine utilization protein B 19 240 1.6E-127 T 23-10-2018 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110 CDG62_11325 3695e22550a6e9fee9a2face9438ba56 249 SUPERFAMILY SSF52499 19 237 3.14E-53 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_11325 3695e22550a6e9fee9a2face9438ba56 249 Pfam PF00857 Isochorismatase family 34 231 1.5E-38 T 23-10-2018 IPR000868 Isochorismatase-like GO:0003824 CDG62_11325 3695e22550a6e9fee9a2face9438ba56 249 Gene3D G3DSA:3.40.50.850 5 247 4.6E-57 T 23-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 CDG62_02650 30c63efb9b0182b8dab48711add81214 401 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 88 134 1.9E-11 T 23-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain CDG62_02650 30c63efb9b0182b8dab48711add81214 401 Pfam PF01610 Transposase 153 392 2.2E-64 T 23-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CDG62_11500 eae0a80bbe772b24f1d825b1ac44a4b5 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 250 2.8E-40 T 23-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDG62_11500 eae0a80bbe772b24f1d825b1ac44a4b5 335 Gene3D G3DSA:3.90.25.10 193 328 7.8E-88 T 23-10-2018 CDG62_11500 eae0a80bbe772b24f1d825b1ac44a4b5 335 Gene3D G3DSA:3.40.50.720 2 272 7.8E-88 T 23-10-2018 CDG62_11500 eae0a80bbe772b24f1d825b1ac44a4b5 335 SUPERFAMILY SSF51735 2 330 5.75E-63 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_16470 683764dd6136aa8831678df5a6368015 253 Gene3D G3DSA:1.10.287.1080 1 120 6.8E-42 T 23-10-2018 CDG62_16470 683764dd6136aa8831678df5a6368015 253 SUPERFAMILY SSF101386 1 96 1.28E-22 T 23-10-2018 CDG62_16470 683764dd6136aa8831678df5a6368015 253 TIGRFAM TIGR00444 mazG: MazG family protein 8 249 5.8E-76 T 23-10-2018 IPR011551 NTP pyrophosphohydrolase MazG CDG62_16470 683764dd6136aa8831678df5a6368015 253 SUPERFAMILY SSF101386 134 224 3.78E-18 T 23-10-2018 CDG62_16470 683764dd6136aa8831678df5a6368015 253 Gene3D G3DSA:1.10.287.1080 125 252 1.0E-35 T 23-10-2018 CDG62_16470 683764dd6136aa8831678df5a6368015 253 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 21 94 8.2E-25 T 23-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CDG62_16470 683764dd6136aa8831678df5a6368015 253 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 161 218 5.1E-7 T 23-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CDG62_07755 4feee85a7fff75a4235b7f46c346cce2 280 SUPERFAMILY SSF48613 38 255 1.33E-7 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDG62_07755 4feee85a7fff75a4235b7f46c346cce2 280 Gene3D G3DSA:1.20.910.10 32 277 1.5E-20 T 23-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CDG62_00850 c0b4b77a94fa00baea9bc29ef1c93caa 551 Pfam PF01844 HNH endonuclease 491 535 1.4E-4 T 23-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CDG62_16295 7db5ad08c4e40bc1bbd33ada41968474 901 Pfam PF10101 Predicted membrane protein (DUF2339) 163 894 1.7E-75 T 23-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane CDG62_17000 174f4aecd6a65137d5d00e493258875d 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 7.8E-28 T 23-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_17000 174f4aecd6a65137d5d00e493258875d 78 Pfam PF00830 Ribosomal L28 family 3 61 1.0E-26 T 23-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_17000 174f4aecd6a65137d5d00e493258875d 78 SUPERFAMILY SSF143800 2 77 5.3E-30 T 23-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_17000 174f4aecd6a65137d5d00e493258875d 78 Gene3D G3DSA:2.30.170.40 2 78 6.1E-33 T 23-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_17000 174f4aecd6a65137d5d00e493258875d 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.279 T 23-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_03245 112572604c2cd8fb1294bd0c4c2121ca 218 Pfam PF10707 PhoP regulatory network protein YrbL 5 204 8.6E-56 T 23-10-2018 IPR019647 PhoP regulatory network protein YrbL CDG62_18365 c6dca014cfffe11c6e0a9396f174b980 118 Pfam PF01042 Endoribonuclease L-PSP 4 115 1.2E-23 T 23-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 CDG62_18365 c6dca014cfffe11c6e0a9396f174b980 118 Gene3D G3DSA:3.30.1330.40 1 118 2.3E-32 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG62_18365 c6dca014cfffe11c6e0a9396f174b980 118 SUPERFAMILY SSF55298 10 117 1.48E-25 T 23-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 CDG62_16940 f360ee0855d907d37cedbd5704d919f6 169 Gene3D G3DSA:3.90.1720.10 52 169 1.6E-28 T 23-10-2018 CDG62_00725 f42720a4f2759b881c7e6f48b6431c8e 193 PIRSF PIRSF000368 1 169 1.4E-41 T 23-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CDG62_00725 f42720a4f2759b881c7e6f48b6431c8e 193 SUPERFAMILY SSF102114 26 110 8.5E-9 T 23-10-2018 CDG62_00725 f42720a4f2759b881c7e6f48b6431c8e 193 Pfam PF13353 4Fe-4S single cluster domain 16 153 1.1E-30 T 23-10-2018 CDG62_00725 f42720a4f2759b881c7e6f48b6431c8e 193 Gene3D G3DSA:3.20.20.70 4 178 2.8E-29 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_00725 f42720a4f2759b881c7e6f48b6431c8e 193 Pfam PF04055 Radical SAM superfamily 26 108 4.7E-8 T 23-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CDG62_11980 7ff1b012d8fb1fc63557a95424b38fdd 67 Pfam PF13619 KTSC domain 6 55 3.3E-6 T 23-10-2018 IPR025309 KTSC domain CDG62_19090 d80ac727f3d2e5b72dccbf634b1410c4 131 Gene3D G3DSA:3.30.429.10 4 131 2.0E-37 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily CDG62_19090 d80ac727f3d2e5b72dccbf634b1410c4 131 Pfam PF14552 Tautomerase enzyme 38 115 4.2E-17 T 23-10-2018 IPR037479 Tautomerase, MSAD family CDG62_19090 d80ac727f3d2e5b72dccbf634b1410c4 131 SUPERFAMILY SSF55331 2 120 5.3E-26 T 23-10-2018 IPR014347 Tautomerase/MIF superfamily CDG62_02970 94ad8caf0db4e367d646b5f85735ba13 357 Gene3D G3DSA:3.40.50.1820 43 351 2.2E-71 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_02970 94ad8caf0db4e367d646b5f85735ba13 357 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 195 207 - T 23-10-2018 IPR033140 Lipase, GDXG, putative serine active site CDG62_02970 94ad8caf0db4e367d646b5f85735ba13 357 SUPERFAMILY SSF53474 86 339 3.67E-59 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_02970 94ad8caf0db4e367d646b5f85735ba13 357 Pfam PF07859 alpha/beta hydrolase fold 123 328 5.9E-61 T 23-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CDG62_14710 109d87add674a8bc001be7af58aac1cd 236 Pfam PF01569 PAP2 superfamily 103 222 3.9E-9 T 23-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDG62_14710 109d87add674a8bc001be7af58aac1cd 236 SUPERFAMILY SSF48317 13 222 3.47E-11 T 23-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CDG62_14710 109d87add674a8bc001be7af58aac1cd 236 Gene3D G3DSA:1.20.144.10 120 235 8.4E-8 T 23-10-2018 CDG62_15070 cf0734b78adfc268f912d1e112a6b1be 474 Pfam PF02447 GntP family permease 65 464 1.3E-4 T 23-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CDG62_02695 dd0d3e19806ed48727e3d15be23bc53e 465 SUPERFAMILY SSF56954 3 462 5.49E-104 T 23-10-2018 CDG62_02695 dd0d3e19806ed48727e3d15be23bc53e 465 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 462 1.6E-103 T 23-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 CDG62_02695 dd0d3e19806ed48727e3d15be23bc53e 465 Gene3D G3DSA:2.20.200.10 102 351 1.7E-126 T 23-10-2018 CDG62_02695 dd0d3e19806ed48727e3d15be23bc53e 465 Gene3D G3DSA:1.20.1600.10 56 462 1.7E-126 T 23-10-2018 CDG62_02695 dd0d3e19806ed48727e3d15be23bc53e 465 Pfam PF02321 Outer membrane efflux protein 65 251 5.0E-26 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_02695 dd0d3e19806ed48727e3d15be23bc53e 465 Pfam PF02321 Outer membrane efflux protein 279 460 1.8E-31 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_14925 1f07b06f45624ed5611cedffaa526bdf 492 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 19 479 3.9E-184 T 23-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG62_14925 1f07b06f45624ed5611cedffaa526bdf 492 SUPERFAMILY SSF75304 1 477 1.1E-163 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG62_14925 1f07b06f45624ed5611cedffaa526bdf 492 Gene3D G3DSA:3.90.1300.10 3 487 1.5E-197 T 23-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG62_14925 1f07b06f45624ed5611cedffaa526bdf 492 Pfam PF01425 Amidase 25 468 1.7E-162 T 23-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG62_14925 1f07b06f45624ed5611cedffaa526bdf 492 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 479 91.12 T 23-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CDG62_14925 1f07b06f45624ed5611cedffaa526bdf 492 ProSitePatterns PS00571 Amidases signature. 152 183 - T 23-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CDG62_00560 d57a9e10c302ab2c05ef058be8273e10 100 ProDom PD029395 PLASMID MOBILIZATION C MOBILITY CONJUGATION MOBC MOBS ORF94 PROBABLE ORF110 2 96 4.0E-6 T 23-10-2018 CDG62_09885 ac3ed7521afd28214c7fd10e8b848bf7 206 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 2 203 20.842 T 23-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_09885 ac3ed7521afd28214c7fd10e8b848bf7 206 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 4 184 4.1E-45 T 23-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_09885 ac3ed7521afd28214c7fd10e8b848bf7 206 Gene3D G3DSA:3.20.20.70 2 197 1.5E-47 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_09885 ac3ed7521afd28214c7fd10e8b848bf7 206 Pfam PF02581 Thiamine monophosphate synthase 4 183 3.8E-51 T 23-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_09885 ac3ed7521afd28214c7fd10e8b848bf7 206 SUPERFAMILY SSF51391 3 184 8.76E-48 T 23-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CDG62_16825 6f4ff61086ad42f8c1bad31ece9bc18e 508 PIRSF PIRSF001394 1 505 1.6E-211 T 23-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CDG62_16825 6f4ff61086ad42f8c1bad31ece9bc18e 508 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 13 285 6.6E-68 T 23-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CDG62_16825 6f4ff61086ad42f8c1bad31ece9bc18e 508 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 326 486 2.5E-47 T 23-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CDG62_16825 6f4ff61086ad42f8c1bad31ece9bc18e 508 SUPERFAMILY SSF117457 317 486 8.37E-64 T 23-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 CDG62_16825 6f4ff61086ad42f8c1bad31ece9bc18e 508 Pfam PF05683 Fumarase C-terminus 289 488 8.4E-78 T 23-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CDG62_16825 6f4ff61086ad42f8c1bad31ece9bc18e 508 Gene3D G3DSA:3.20.130.10 297 487 1.0E-60 T 23-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 CDG62_16825 6f4ff61086ad42f8c1bad31ece9bc18e 508 Pfam PF05681 Fumarate hydratase (Fumerase) 12 285 3.9E-102 T 23-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CDG62_05085 6dce772bae931eb65fe849f4a94592ec 141 Pfam PF04273 Putative phosphatase (DUF442) 31 132 1.1E-21 T 23-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 CDG62_05085 6dce772bae931eb65fe849f4a94592ec 141 SUPERFAMILY SSF52799 34 127 9.18E-5 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like CDG62_05085 6dce772bae931eb65fe849f4a94592ec 141 Gene3D G3DSA:3.90.190.10 18 140 5.3E-27 T 23-10-2018 IPR029021 Protein-tyrosine phosphatase-like CDG62_12800 22d77475f2338558ae38796d116984c9 139 SUPERFAMILY SSF51316 3 126 4.29E-29 T 23-10-2018 IPR011057 Mss4-like superfamily CDG62_12800 22d77475f2338558ae38796d116984c9 139 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 23 109 2.3E-11 T 23-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CDG62_12800 22d77475f2338558ae38796d116984c9 139 Gene3D G3DSA:2.170.150.70 1 114 3.2E-13 T 23-10-2018 CDG62_01470 39594bcfa9e710880dcb7b125b63c20c 227 Pfam PF11393 Type-IV b secretion system, inner-membrane complex component 45 221 5.3E-20 T 23-10-2018 IPR021055 Type-IV b secretion system, inner-membrane complex component CDG62_11230 b86bccf49d8c209681ad7d98dd922d2a 217 Pfam PF01144 Coenzyme A transferase 9 200 1.1E-38 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_11230 b86bccf49d8c209681ad7d98dd922d2a 217 Gene3D G3DSA:3.40.1080.10 4 215 2.9E-83 T 23-10-2018 CDG62_11230 b86bccf49d8c209681ad7d98dd922d2a 217 SUPERFAMILY SSF100950 8 212 3.73E-62 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG62_11230 b86bccf49d8c209681ad7d98dd922d2a 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 47 55 - T 23-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 CDG62_11230 b86bccf49d8c209681ad7d98dd922d2a 217 SMART SM00882 9 206 7.0E-61 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_11230 b86bccf49d8c209681ad7d98dd922d2a 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 9.4E-88 T 23-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CDG62_11895 b40eee31801c10f0f0614e1493604f1e 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 217 2.0E-24 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_11895 b40eee31801c10f0f0614e1493604f1e 219 Gene3D G3DSA:1.10.3720.10 2 217 5.9E-55 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_11895 b40eee31801c10f0f0614e1493604f1e 219 SUPERFAMILY SSF161098 8 204 1.1E-48 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_18980 66781012c00868eece16e62e3390dc3f 544 Pfam PF04932 O-Antigen ligase 192 340 9.2E-16 T 23-10-2018 IPR007016 O-antigen ligase-related CDG62_18980 66781012c00868eece16e62e3390dc3f 544 Pfam PF15864 Protein glycosylation ligase 153 178 2.6E-8 T 23-10-2018 IPR031726 Protein glycosylation ligase domain CDG62_18980 66781012c00868eece16e62e3390dc3f 544 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 365 524 1.7E-13 T 23-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal CDG62_03375 9110a370ac62a7e381c47e2d5f6295b6 443 Pfam PF07819 PGAP1-like protein 153 375 3.2E-29 T 23-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 CDG62_03375 9110a370ac62a7e381c47e2d5f6295b6 443 Gene3D G3DSA:3.40.50.1820 156 416 6.0E-26 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_03375 9110a370ac62a7e381c47e2d5f6295b6 443 SUPERFAMILY SSF53474 156 399 1.61E-18 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_13235 b163d9e51093e5b43381910d9d75e200 317 Pfam PF14415 Domain of unknown function (DUF4424) 17 311 2.5E-78 T 23-10-2018 IPR025538 Domain of unknown function DUF4424 CDG62_16685 c83c346c40f1f3a7753f6456ca1946c5 92 ProDom PD069311 TRANSCRIPTIONAL ACTIVATOR PRTN TRANSCRIPTION PYOCIN BIOSYNTHESIS DNA-BINDING BACTERIOCIN REGULATOR REGULATOR 9 79 9.0E-4 T 23-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 CDG62_16685 c83c346c40f1f3a7753f6456ca1946c5 92 Pfam PF11112 Pyocin activator protein PrtN 10 83 3.4E-19 T 23-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 CDG62_14455 5b63dd71f75d3ae9973b3ea5e1f58987 130 Pfam PF04304 Protein of unknown function (DUF454) 4 117 2.0E-31 T 23-10-2018 IPR007401 Protein of unknown function DUF454 CDG62_14455 5b63dd71f75d3ae9973b3ea5e1f58987 130 PIRSF PIRSF016789 1 123 1.3E-24 T 23-10-2018 IPR007401 Protein of unknown function DUF454 CDG62_13725 d79d334a47d4ad23b58dc652462d1809 183 SUPERFAMILY SSF58100 2 133 2.22E-5 T 23-10-2018 CDG62_17775 3535c20db528dea331565c8acc89e6ee 600 Gene3D G3DSA:3.40.50.300 339 592 3.7E-74 T 23-10-2018 CDG62_17775 3535c20db528dea331565c8acc89e6ee 600 SUPERFAMILY SSF90123 9 329 5.76E-48 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG62_17775 3535c20db528dea331565c8acc89e6ee 600 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_17775 3535c20db528dea331565c8acc89e6ee 600 Pfam PF00005 ABC transporter 362 507 3.0E-32 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_17775 3535c20db528dea331565c8acc89e6ee 600 SUPERFAMILY SSF52540 337 575 5.67E-73 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17775 3535c20db528dea331565c8acc89e6ee 600 SMART SM00382 371 556 6.8E-11 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_17775 3535c20db528dea331565c8acc89e6ee 600 Gene3D G3DSA:1.20.1560.10 6 330 1.3E-45 T 23-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 CDG62_17775 3535c20db528dea331565c8acc89e6ee 600 Pfam PF00664 ABC transporter transmembrane region 22 299 2.5E-24 T 23-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 CDG62_13180 0e63171b40ac870a1329c16874a20e39 303 SUPERFAMILY SSF103481 191 288 7.32E-12 T 23-10-2018 CDG62_13180 0e63171b40ac870a1329c16874a20e39 303 SUPERFAMILY SSF103481 40 141 8.76E-14 T 23-10-2018 CDG62_13180 0e63171b40ac870a1329c16874a20e39 303 Pfam PF00892 EamA-like transporter family 13 137 5.6E-11 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_13180 0e63171b40ac870a1329c16874a20e39 303 Pfam PF00892 EamA-like transporter family 149 285 4.5E-16 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_10335 854386d1f10abd38930a5c319a738d04 339 Gene3D G3DSA:3.40.50.1820 27 334 3.9E-58 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_10335 854386d1f10abd38930a5c319a738d04 339 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 159 171 - T 23-10-2018 IPR033140 Lipase, GDXG, putative serine active site CDG62_10335 854386d1f10abd38930a5c319a738d04 339 Pfam PF07859 alpha/beta hydrolase fold 88 298 1.1E-26 T 23-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 CDG62_10335 854386d1f10abd38930a5c319a738d04 339 SUPERFAMILY SSF53474 51 330 5.05E-45 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_15600 fbb63375b88ad29eb3928e99abc44361 262 Pfam PF07103 Protein of unknown function (DUF1365) 10 256 5.9E-50 T 23-10-2018 IPR010775 Protein of unknown function DUF1365 CDG62_06295 697b90f4f258e156ece3149caf21703e 232 SUPERFAMILY SSF74653 153 229 3.27E-20 T 23-10-2018 CDG62_06295 697b90f4f258e156ece3149caf21703e 232 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 155 231 1.9E-19 T 23-10-2018 IPR006260 TonB/TolA, C-terminal CDG62_06295 697b90f4f258e156ece3149caf21703e 232 PRINTS PR01217 Proline rich extensin signature 101 122 5.0E-11 T 23-10-2018 CDG62_06295 697b90f4f258e156ece3149caf21703e 232 PRINTS PR01217 Proline rich extensin signature 57 73 5.0E-11 T 23-10-2018 CDG62_06295 697b90f4f258e156ece3149caf21703e 232 PRINTS PR01217 Proline rich extensin signature 123 139 5.0E-11 T 23-10-2018 CDG62_06295 697b90f4f258e156ece3149caf21703e 232 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 154 231 1.3E-19 T 23-10-2018 IPR037682 TonB, C-terminal GO:0055085 CDG62_06295 697b90f4f258e156ece3149caf21703e 232 Gene3D G3DSA:3.30.1150.10 102 232 3.4E-20 T 23-10-2018 CDG62_19040 f87a1f2c74cb006503e8c24c2125784a 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 260 9.7E-28 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_19040 f87a1f2c74cb006503e8c24c2125784a 271 Gene3D G3DSA:1.10.3720.10 59 261 1.4E-26 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_19040 f87a1f2c74cb006503e8c24c2125784a 271 SUPERFAMILY SSF161098 69 250 4.58E-34 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_18680 90cb13e630bf26576c6e2e4ec6a93492 102 Gene3D G3DSA:3.30.300.90 2 90 6.2E-24 T 23-10-2018 CDG62_18680 90cb13e630bf26576c6e2e4ec6a93492 102 PIRSF PIRSF003113 1 98 2.3E-30 T 23-10-2018 IPR002634 BolA protein CDG62_18680 90cb13e630bf26576c6e2e4ec6a93492 102 Pfam PF01722 BolA-like protein 12 85 5.5E-23 T 23-10-2018 IPR002634 BolA protein CDG62_18680 90cb13e630bf26576c6e2e4ec6a93492 102 SUPERFAMILY SSF82657 2 89 4.71E-26 T 23-10-2018 IPR036065 BolA-like superfamily CDG62_16965 6e4c5519b2397ba8d1a80cb5d2dafac2 175 SUPERFAMILY SSF55068 1 163 1.31E-71 T 23-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_16965 6e4c5519b2397ba8d1a80cb5d2dafac2 175 Pfam PF01625 Peptide methionine sulfoxide reductase 3 153 9.8E-63 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_16965 6e4c5519b2397ba8d1a80cb5d2dafac2 175 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 152 1.0E-59 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_16965 6e4c5519b2397ba8d1a80cb5d2dafac2 175 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 157 36.547 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_16965 6e4c5519b2397ba8d1a80cb5d2dafac2 175 Gene3D G3DSA:3.30.1060.10 1 160 1.5E-69 T 23-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_15380 a577353497d0536e5b04fa0d544dff3c 238 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 5 236 1.9E-74 T 23-10-2018 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 CDG62_15380 a577353497d0536e5b04fa0d544dff3c 238 Gene3D G3DSA:3.90.226.10 34 235 9.9E-20 T 23-10-2018 CDG62_15380 a577353497d0536e5b04fa0d544dff3c 238 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 6 235 5.9E-59 T 23-10-2018 CDG62_15380 a577353497d0536e5b04fa0d544dff3c 238 SUPERFAMILY SSF52096 65 196 1.55E-15 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_01815 ce1f773b066f7b58785722d6df9c4012 150 Pfam PF12120 Rifampin ADP-ribosyl transferase 20 122 1.1E-41 T 23-10-2018 IPR021975 Rifampin ADP-ribosyltransferase CDG62_01815 ce1f773b066f7b58785722d6df9c4012 150 Gene3D G3DSA:3.20.170.40 7 150 1.6E-59 T 23-10-2018 IPR038611 Rifampin ADP-ribosyltransferase superfamily CDG62_02610 ad45d0843a97f7d484cf2344498def1f 394 SUPERFAMILY SSF69572 172 299 8.63E-9 T 23-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CDG62_02610 ad45d0843a97f7d484cf2344498def1f 394 Gene3D G3DSA:3.40.50.720 164 374 2.1E-9 T 23-10-2018 CDG62_02210 52f59afd8f106d66bd6d1b66c4245484 311 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 273 288 5.4E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_02210 52f59afd8f106d66bd6d1b66c4245484 311 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 288 304 5.4E-5 T 23-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CDG62_02210 52f59afd8f106d66bd6d1b66c4245484 311 Pfam PF12852 Cupin 2 189 2.9E-37 T 23-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain CDG62_02210 52f59afd8f106d66bd6d1b66c4245484 311 SUPERFAMILY SSF46689 204 254 3.94E-7 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_02210 52f59afd8f106d66bd6d1b66c4245484 311 SUPERFAMILY SSF46689 257 306 1.88E-11 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_02210 52f59afd8f106d66bd6d1b66c4245484 311 SMART SM00342 221 304 3.5E-28 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_02210 52f59afd8f106d66bd6d1b66c4245484 311 Gene3D G3DSA:1.10.10.60 201 310 7.6E-29 T 23-10-2018 CDG62_02210 52f59afd8f106d66bd6d1b66c4245484 311 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 258 300 - T 23-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CDG62_02210 52f59afd8f106d66bd6d1b66c4245484 311 Pfam PF12833 Helix-turn-helix domain 227 305 3.4E-20 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_18645 1bd122cc6f0f8697d6e0811ba42cfaef 121 SUPERFAMILY SSF101756 34 118 7.19E-23 T 23-10-2018 IPR036700 Bacterial OB-fold superfamily CDG62_18645 1bd122cc6f0f8697d6e0811ba42cfaef 121 Gene3D G3DSA:2.40.50.200 20 120 1.2E-24 T 23-10-2018 IPR036700 Bacterial OB-fold superfamily CDG62_18645 1bd122cc6f0f8697d6e0811ba42cfaef 121 Pfam PF04076 Bacterial OB fold (BOF) protein 30 118 2.0E-20 T 23-10-2018 IPR005220 Bacterial OB-fold CDG62_08215 c8db78dc3661c0f908d7f794aab254c9 77 SUPERFAMILY SSF64307 6 76 4.06E-14 T 23-10-2018 IPR036868 TusA-like domain superfamily CDG62_08215 c8db78dc3661c0f908d7f794aab254c9 77 Gene3D G3DSA:3.30.110.40 2 77 5.7E-13 T 23-10-2018 IPR036868 TusA-like domain superfamily CDG62_08215 c8db78dc3661c0f908d7f794aab254c9 77 Pfam PF01206 Sulfurtransferase TusA 10 76 5.4E-14 T 23-10-2018 IPR001455 TusA-like domain CDG62_02250 d793f2d6b36a47a74033e77004b66680 220 Pfam PF01625 Peptide methionine sulfoxide reductase 35 169 6.6E-30 T 23-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_02250 d793f2d6b36a47a74033e77004b66680 220 SUPERFAMILY SSF55068 30 168 1.83E-38 T 23-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_02250 d793f2d6b36a47a74033e77004b66680 220 Gene3D G3DSA:3.30.1060.10 28 212 3.7E-43 T 23-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CDG62_16635 d55cca4d7ed57da055e9ea67736433b7 348 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 344 2.2E-116 T 23-10-2018 IPR017686 Phage/plasmid-like protein CDG62_16635 d55cca4d7ed57da055e9ea67736433b7 348 Pfam PF06067 Domain of unknown function (DUF932) 77 328 1.6E-77 T 23-10-2018 IPR026325 Protein of unknown function DUF932 CDG62_00830 df4c51c206b4258e5694cb7a28737bdb 203 Pfam PF08849 Putative inner membrane protein (DUF1819) 6 187 3.4E-45 T 23-10-2018 IPR014948 Protein of unknown function DUF1819, putative inner membrane CDG62_00830 df4c51c206b4258e5694cb7a28737bdb 203 Gene3D G3DSA:1.10.3540.10 1 202 2.1E-64 T 23-10-2018 CDG62_00690 131e1852ef8b37078401c070dac40736 166 Pfam PF03350 Uncharacterized protein family, UPF0114 8 126 4.3E-13 T 23-10-2018 IPR005134 Uncharacterised protein family UPF0114 CDG62_14560 b3d48f1b7797e5f3f6793784f8ed5b27 157 Pfam PF08905 Domain of unknown function (DUF1850) 44 124 1.0E-17 T 23-10-2018 IPR015001 Protein of unknown function DUF1850 CDG62_10590 10abe3c8543f4ee60a4c1270e92987b0 144 SUPERFAMILY SSF54197 1 132 5.53E-30 T 23-10-2018 IPR036265 HIT-like superfamily CDG62_10590 10abe3c8543f4ee60a4c1270e92987b0 144 Gene3D G3DSA:3.30.428.10 1 136 1.0E-37 T 23-10-2018 IPR036265 HIT-like superfamily CDG62_10590 10abe3c8543f4ee60a4c1270e92987b0 144 PIRSF PIRSF000714 1 138 3.7E-47 T 23-10-2018 IPR026026 Histidine triad hydrolase, Hint-type CDG62_10590 10abe3c8543f4ee60a4c1270e92987b0 144 Pfam PF01230 HIT domain 10 98 7.2E-12 T 23-10-2018 IPR001310 Histidine triad (HIT) protein CDG62_13295 e1a32b56d08af2e4c5517417be62ddcc 403 Pfam PF00487 Fatty acid desaturase 126 336 1.2E-27 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CDG62_14190 9c75f93c5b574ca40a78c187738747bd 205 Pfam PF01694 Rhomboid family 41 190 5.0E-25 T 23-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CDG62_14190 9c75f93c5b574ca40a78c187738747bd 205 Gene3D G3DSA:1.20.1540.10 4 193 2.7E-28 T 23-10-2018 IPR035952 Rhomboid-like superfamily CDG62_14190 9c75f93c5b574ca40a78c187738747bd 205 SUPERFAMILY SSF144091 7 190 4.84E-36 T 23-10-2018 CDG62_15915 c945cb9d6e27f843fba2ade2c5861908 271 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 21 91 1.6E-16 T 23-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 CDG62_15915 c945cb9d6e27f843fba2ade2c5861908 271 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 11 239 39.505 T 23-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 CDG62_15915 c945cb9d6e27f843fba2ade2c5861908 271 PIRSF PIRSF037208 4 252 4.2E-98 T 23-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 CDG62_15915 c945cb9d6e27f843fba2ade2c5861908 271 SUPERFAMILY SSF55729 84 243 9.99E-28 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_15915 c945cb9d6e27f843fba2ade2c5861908 271 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 113 233 9.2E-38 T 23-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 CDG62_16690 166b52840088a4c2fc7705fbbc62afce 380 Gene3D G3DSA:1.10.443.10 184 373 5.9E-19 T 23-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 CDG62_16690 166b52840088a4c2fc7705fbbc62afce 380 Pfam PF00589 Phage integrase family 216 363 4.1E-13 T 23-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CDG62_16690 166b52840088a4c2fc7705fbbc62afce 380 SUPERFAMILY SSF56349 69 363 8.95E-32 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG62_06225 3544545eaa30cc321ca2724b64daab3e 355 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 253 1.6E-26 T 23-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CDG62_06225 3544545eaa30cc321ca2724b64daab3e 355 Gene3D G3DSA:3.40.50.720 2 354 1.5E-88 T 23-10-2018 CDG62_06225 3544545eaa30cc321ca2724b64daab3e 355 SUPERFAMILY SSF51735 9 344 4.52E-61 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_05895 ff2352a341b3afb715ed0ca0e075bc31 144 Pfam PF13673 Acetyltransferase (GNAT) domain 25 139 1.7E-21 T 23-10-2018 IPR000182 GNAT domain CDG62_05895 ff2352a341b3afb715ed0ca0e075bc31 144 SUPERFAMILY SSF55729 5 139 3.71E-33 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_05895 ff2352a341b3afb715ed0ca0e075bc31 144 Gene3D G3DSA:3.40.630.30 4 138 1.1E-36 T 23-10-2018 CDG62_06810 4dafc7459ae4dc6c63f88ae150d6259d 193 Gene3D G3DSA:2.50.20.10 23 192 6.9E-31 T 23-10-2018 CDG62_06810 4dafc7459ae4dc6c63f88ae150d6259d 193 Pfam PF03550 Outer membrane lipoprotein LolB 41 192 1.5E-36 T 23-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CDG62_06810 4dafc7459ae4dc6c63f88ae150d6259d 193 SUPERFAMILY SSF89392 21 192 8.63E-32 T 23-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDG62_06810 4dafc7459ae4dc6c63f88ae150d6259d 193 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 26 192 3.8E-30 T 23-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CDG62_17895 f6508bee60928d2ed33c3d759750d8dd 195 Pfam PF03922 OmpW family 20 195 8.6E-36 T 23-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CDG62_17895 f6508bee60928d2ed33c3d759750d8dd 195 Gene3D G3DSA:2.40.160.20 15 195 3.8E-40 T 23-10-2018 CDG62_17895 f6508bee60928d2ed33c3d759750d8dd 195 SUPERFAMILY SSF56925 50 195 1.07E-20 T 23-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CDG62_08485 4327e43809bd9c689322c2648ba281c4 179 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 14 165 4.8E-47 T 23-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDG62_08485 4327e43809bd9c689322c2648ba281c4 179 PIRSF PIRSF006118 2 175 5.4E-61 T 23-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CDG62_08485 4327e43809bd9c689322c2648ba281c4 179 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 15 128 3.2E-13 T 23-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CDG62_08485 4327e43809bd9c689322c2648ba281c4 179 SUPERFAMILY SSF56784 12 172 1.21E-39 T 23-10-2018 IPR036412 HAD-like superfamily CDG62_08485 4327e43809bd9c689322c2648ba281c4 179 Gene3D G3DSA:3.40.50.1000 2 176 2.6E-52 T 23-10-2018 IPR023214 HAD superfamily CDG62_08485 4327e43809bd9c689322c2648ba281c4 179 Pfam PF08282 haloacid dehalogenase-like hydrolase 87 146 4.4E-8 T 23-10-2018 CDG62_06570 4d81325d8eb71fa13cb264b2c6618966 344 SUPERFAMILY SSF55909 15 327 1.23E-47 T 23-10-2018 CDG62_06570 4d81325d8eb71fa13cb264b2c6618966 344 Gene3D G3DSA:3.75.10.10 14 329 4.0E-37 T 23-10-2018 CDG62_06570 4d81325d8eb71fa13cb264b2c6618966 344 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 21 327 1.7E-29 T 23-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 CDG62_01620 917a72c745736d6c1fc6f68028189fd0 93 Gene3D G3DSA:2.170.150.40 2 92 3.6E-24 T 23-10-2018 CDG62_01620 917a72c745736d6c1fc6f68028189fd0 93 Pfam PF04248 Domain of unknown function (DUF427) 2 88 5.1E-27 T 23-10-2018 IPR007361 Domain of unknown function DUF427 CDG62_15345 3fab7f459ac5f92fe1b6725916377b84 325 SMART SM00972 271 322 2.2E-11 T 23-10-2018 IPR007893 Spore coat protein U CDG62_15345 3fab7f459ac5f92fe1b6725916377b84 325 SMART SM00972 106 172 0.39 T 23-10-2018 IPR007893 Spore coat protein U CDG62_15345 3fab7f459ac5f92fe1b6725916377b84 325 Pfam PF05229 Spore Coat Protein U domain 199 322 5.5E-28 T 23-10-2018 IPR007893 Spore coat protein U CDG62_15345 3fab7f459ac5f92fe1b6725916377b84 325 Pfam PF05229 Spore Coat Protein U domain 34 166 1.1E-13 T 23-10-2018 IPR007893 Spore coat protein U CDG62_18350 35417ea3ffe41f4200d2391e1e1782ea 237 Pfam PF01183 Glycosyl hydrolases family 25 29 202 9.5E-47 T 23-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 CDG62_18350 35417ea3ffe41f4200d2391e1e1782ea 237 Gene3D G3DSA:3.20.20.80 13 224 8.5E-70 T 23-10-2018 CDG62_18350 35417ea3ffe41f4200d2391e1e1782ea 237 SUPERFAMILY SSF51445 22 222 8.74E-57 T 23-10-2018 IPR017853 Glycoside hydrolase superfamily CDG62_18350 35417ea3ffe41f4200d2391e1e1782ea 237 SMART SM00641 25 130 2.9E-9 T 23-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup CDG62_07000 78d9e05de827bead2154d43cba2b3915 107 SUPERFAMILY SSF46767 11 92 2.49E-22 T 23-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 CDG62_07000 78d9e05de827bead2154d43cba2b3915 107 Gene3D G3DSA:1.10.10.10 7 107 3.1E-30 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_07000 78d9e05de827bead2154d43cba2b3915 107 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 13 91 2.2E-22 T 23-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CDG62_17100 c0032ac2f533be5107bb1067b9e558e2 369 SUPERFAMILY SSF56219 101 319 8.38E-33 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDG62_17100 c0032ac2f533be5107bb1067b9e558e2 369 Gene3D G3DSA:3.60.10.10 106 322 1.2E-21 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDG62_17100 c0032ac2f533be5107bb1067b9e558e2 369 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 117 312 2.9E-16 T 23-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase CDG62_06390 fe5b1c21c3bf6500f217c7b6d5a01130 157 SUPERFAMILY SSF54106 106 156 7.19E-7 T 23-10-2018 CDG62_06390 fe5b1c21c3bf6500f217c7b6d5a01130 157 Pfam PF04972 BON domain 34 99 2.2E-8 T 23-10-2018 IPR007055 BON domain CDG62_06390 fe5b1c21c3bf6500f217c7b6d5a01130 157 SMART SM00257 107 156 6.1E-11 T 23-10-2018 IPR018392 LysM domain CDG62_06390 fe5b1c21c3bf6500f217c7b6d5a01130 157 Pfam PF01476 LysM domain 108 156 5.5E-10 T 23-10-2018 IPR018392 LysM domain CDG62_06390 fe5b1c21c3bf6500f217c7b6d5a01130 157 Gene3D G3DSA:3.10.350.10 107 155 1.4E-12 T 23-10-2018 IPR036779 LysM domain superfamily CDG62_13130 325cf618672bed68fd0000a14256a500 406 Pfam PF01594 AI-2E family transporter 11 342 5.4E-59 T 23-10-2018 IPR002549 Transmembrane protein TqsA-like CDG62_14075 bbd47f43274f0ac807f1df719d226398 388 Pfam PF04116 Fatty acid hydroxylase superfamily 208 338 7.7E-29 T 23-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 CDG62_06575 f3ef7329a3f3cdd5607368b1f9a93088 145 Gene3D G3DSA:3.30.110.70 42 145 3.8E-22 T 23-10-2018 CDG62_06575 f3ef7329a3f3cdd5607368b1f9a93088 145 SUPERFAMILY SSF117782 43 144 1.23E-22 T 23-10-2018 IPR035439 UPF0145 domain superfamily CDG62_06575 f3ef7329a3f3cdd5607368b1f9a93088 145 Pfam PF01906 Putative heavy-metal-binding 44 143 2.6E-21 T 23-10-2018 IPR002765 Uncharacterised protein family UPF0145 CDG62_13185 b2275be936b01b3b0859b66f0153c681 156 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 21 149 1.1E-46 T 23-10-2018 IPR003791 Protein of unknown function UPF0178 CDG62_13185 b2275be936b01b3b0859b66f0153c681 156 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 4 150 27.959 T 23-10-2018 IPR003791 Protein of unknown function UPF0178 CDG62_10680 77c4905153d0a33f4e41e235c7c28622 89 SMART SM01324 5 84 8.3E-11 T 23-10-2018 IPR025582 YARHG domain CDG62_10680 77c4905153d0a33f4e41e235c7c28622 89 Pfam PF13308 YARHG domain 36 83 8.5E-8 T 23-10-2018 IPR025582 YARHG domain CDG62_09125 bdbc5b6cd89d936b18d2a02bd0eed102 303 Pfam PF12697 Alpha/beta hydrolase family 23 291 1.9E-15 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_09125 bdbc5b6cd89d936b18d2a02bd0eed102 303 Gene3D G3DSA:3.40.50.1820 5 300 5.0E-38 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_09125 bdbc5b6cd89d936b18d2a02bd0eed102 303 SUPERFAMILY SSF53474 5 299 1.7E-37 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_16465 3fc954b4406f3b55265469c71ecd0c59 125 SMART SM00278 73 92 0.24 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG62_16465 3fc954b4406f3b55265469c71ecd0c59 125 SMART SM00278 103 122 65.0 T 23-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CDG62_16465 3fc954b4406f3b55265469c71ecd0c59 125 Pfam PF12836 Helix-hairpin-helix motif 62 123 1.8E-22 T 23-10-2018 CDG62_16465 3fc954b4406f3b55265469c71ecd0c59 125 SUPERFAMILY SSF47781 61 122 7.23E-26 T 23-10-2018 IPR010994 RuvA domain 2-like CDG62_16465 3fc954b4406f3b55265469c71ecd0c59 125 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 63 124 1.5E-23 T 23-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CDG62_16465 3fc954b4406f3b55265469c71ecd0c59 125 Gene3D G3DSA:1.10.150.280 55 124 6.6E-22 T 23-10-2018 CDG62_10235 3021b69b04e9f4edb72fe13402ae69b6 121 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 87 7.6E-16 T 23-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CDG62_02660 00ddda19ae5c1ea740cfddf383dbf57f 363 Gene3D G3DSA:3.40.50.720 171 305 8.1E-134 T 23-10-2018 CDG62_02660 00ddda19ae5c1ea740cfddf383dbf57f 363 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 152 1.1E-24 T 23-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CDG62_02660 00ddda19ae5c1ea740cfddf383dbf57f 363 Pfam PF00107 Zinc-binding dehydrogenase 194 313 9.4E-29 T 23-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CDG62_02660 00ddda19ae5c1ea740cfddf383dbf57f 363 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 23-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CDG62_02660 00ddda19ae5c1ea740cfddf383dbf57f 363 SUPERFAMILY SSF51735 157 327 6.88E-43 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_02660 00ddda19ae5c1ea740cfddf383dbf57f 363 SMART SM00829 11 360 3.2E-5 T 23-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CDG62_02660 00ddda19ae5c1ea740cfddf383dbf57f 363 Gene3D G3DSA:3.90.180.10 8 356 8.1E-134 T 23-10-2018 CDG62_02660 00ddda19ae5c1ea740cfddf383dbf57f 363 SUPERFAMILY SSF50129 1 190 3.69E-57 T 23-10-2018 IPR011032 GroES-like superfamily CDG62_06970 d658f9c29aacdfcb005704444e5a7af5 214 Pfam PF07290 Protein of unknown function (DUF1449) 10 212 1.0E-57 T 23-10-2018 IPR010840 Protein of unknown function DUF1449 CDG62_01755 d6e03a1276c0e9f4e31aa35172589498 349 Pfam PF13387 Domain of unknown function (DUF4105) 137 290 1.2E-44 T 23-10-2018 IPR025178 Domain of unknown function DUF4105 CDG62_11985 81aaa6069d788486d3c57093a8c9b334 201 Gene3D G3DSA:3.40.50.150 6 200 6.1E-46 T 23-10-2018 CDG62_11985 81aaa6069d788486d3c57093a8c9b334 201 SUPERFAMILY SSF53335 16 194 3.07E-30 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_11985 81aaa6069d788486d3c57093a8c9b334 201 Pfam PF01596 O-methyltransferase 32 161 2.3E-19 T 23-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 CDG62_09265 0247e542c0287c6f2203a4af16d7283c 203 Pfam PF07290 Protein of unknown function (DUF1449) 12 191 1.6E-19 T 23-10-2018 IPR010840 Protein of unknown function DUF1449 CDG62_04600 a355c421179a8d9916ce0ee7b570e87d 199 Gene3D G3DSA:3.40.50.450 1 192 1.5E-70 T 23-10-2018 CDG62_04600 a355c421179a8d9916ce0ee7b570e87d 199 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 4 179 1.6E-58 T 23-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CDG62_04600 a355c421179a8d9916ce0ee7b570e87d 199 Pfam PF03641 Possible lysine decarboxylase 47 177 1.0E-38 T 23-10-2018 IPR031100 LOG family CDG62_04600 a355c421179a8d9916ce0ee7b570e87d 199 SUPERFAMILY SSF102405 3 177 1.83E-58 T 23-10-2018 CDG62_05155 47447ac242e7a5752fabdea1b74a6198 303 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 282 2.7E-60 T 23-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 CDG62_05110 1cc64fc59706717d61de1885862f12c2 165 Pfam PF07366 SnoaL-like polyketide cyclase 48 155 1.2E-12 T 23-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 CDG62_05110 1cc64fc59706717d61de1885862f12c2 165 Gene3D G3DSA:3.10.450.50 39 165 3.0E-40 T 23-10-2018 CDG62_05110 1cc64fc59706717d61de1885862f12c2 165 SUPERFAMILY SSF54427 42 155 5.72E-26 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG62_15315 985b5d934f9ec0134d27618d3b8e8024 301 SUPERFAMILY SSF103481 42 149 2.22E-8 T 23-10-2018 CDG62_15315 985b5d934f9ec0134d27618d3b8e8024 301 TIGRFAM TIGR00688 rarD: protein RarD 10 259 6.9E-47 T 23-10-2018 IPR004626 RarD protein GO:0005887 CDG62_18730 ca4ace49277f2a0afb3e751e217d818d 433 Pfam PF01494 FAD binding domain 7 179 6.5E-17 T 23-10-2018 IPR002938 FAD-binding domain GO:0071949 CDG62_18730 ca4ace49277f2a0afb3e751e217d818d 433 SUPERFAMILY SSF51905 5 374 2.53E-41 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_18730 ca4ace49277f2a0afb3e751e217d818d 433 Gene3D G3DSA:3.50.50.60 3 432 8.3E-121 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_18740 b460a6435815e9c139b94673a72120f6 213 SUPERFAMILY SSF89392 33 197 1.92E-15 T 23-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDG62_18740 b460a6435815e9c139b94673a72120f6 213 Gene3D G3DSA:2.50.20.10 30 211 5.2E-23 T 23-10-2018 CDG62_18740 b460a6435815e9c139b94673a72120f6 213 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 46 199 8.6E-13 T 23-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CDG62_14500 65b7b9fb18053bb83fd8de984a4307c6 127 Gene3D G3DSA:3.40.50.12740 7 127 4.3E-40 T 23-10-2018 CDG62_14500 65b7b9fb18053bb83fd8de984a4307c6 127 SMART SM00448 8 121 6.7E-38 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_14500 65b7b9fb18053bb83fd8de984a4307c6 127 SUPERFAMILY SSF52172 6 126 6.69E-38 T 23-10-2018 IPR011006 CheY-like superfamily CDG62_14500 65b7b9fb18053bb83fd8de984a4307c6 127 Pfam PF00072 Response regulator receiver domain 10 122 9.6E-28 T 23-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CDG62_07480 6692bd0b1396a6bff026100c93004794 376 Gene3D G3DSA:3.40.1710.10 39 153 1.0E-6 T 23-10-2018 CDG62_07480 6692bd0b1396a6bff026100c93004794 376 Pfam PF12698 ABC-2 family transporter protein 17 364 4.9E-29 T 23-10-2018 CDG62_03195 2bb63cc03531c2cac5247731247ff3fa 246 Pfam PF01738 Dienelactone hydrolase family 22 242 4.0E-43 T 23-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 CDG62_03195 2bb63cc03531c2cac5247731247ff3fa 246 Gene3D G3DSA:3.40.50.1820 1 245 7.0E-59 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_03195 2bb63cc03531c2cac5247731247ff3fa 246 SUPERFAMILY SSF53474 6 244 1.34E-39 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_02925 6a10e9aed3aa38672628ec73fcbbe3e2 337 Gene3D G3DSA:3.40.190.170 60 244 3.1E-11 T 23-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily CDG62_18315 96ca5838239bdcf99d3e8a76fae1915a 214 Pfam PF03458 UPF0126 domain 5 79 6.8E-20 T 23-10-2018 IPR005115 Uncharacterised domain UPF0126 CDG62_18315 96ca5838239bdcf99d3e8a76fae1915a 214 Pfam PF03458 UPF0126 domain 91 162 1.3E-19 T 23-10-2018 IPR005115 Uncharacterised domain UPF0126 CDG62_14700 29b0625a9d83cb3045a47270aa3afef3 395 Gene3D G3DSA:1.10.3430.10 1 394 1.9E-97 T 23-10-2018 IPR029020 Ammonium/urea transporter CDG62_14700 29b0625a9d83cb3045a47270aa3afef3 395 SUPERFAMILY SSF111352 2 370 5.1E-95 T 23-10-2018 CDG62_14700 29b0625a9d83cb3045a47270aa3afef3 395 ProSitePatterns PS01219 Ammonium transporters signature. 152 177 - T 23-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CDG62_14700 29b0625a9d83cb3045a47270aa3afef3 395 Pfam PF00909 Ammonium Transporter Family 8 386 5.3E-84 T 23-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CDG62_09680 310ad14074c69f60068e7a0b33d0c17c 92 Pfam PF11006 Protein of unknown function (DUF2845) 28 90 9.4E-5 T 23-10-2018 IPR021268 Protein of unknown function DUF2845 CDG62_14270 cbadc8db3923e510ac25db82f406b717 191 Pfam PF04973 Nicotinamide mononucleotide transporter 3 180 1.1E-43 T 23-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CDG62_14270 cbadc8db3923e510ac25db82f406b717 191 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 2 182 4.2E-20 T 23-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CDG62_01245 6370160640dfac609088b1c9f07cb636 570 Pfam PF00899 ThiF family 295 439 8.8E-23 T 23-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CDG62_01245 6370160640dfac609088b1c9f07cb636 570 Gene3D G3DSA:3.40.50.720 281 535 5.6E-27 T 23-10-2018 CDG62_01245 6370160640dfac609088b1c9f07cb636 570 SUPERFAMILY SSF69572 295 518 2.62E-26 T 23-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CDG62_01245 6370160640dfac609088b1c9f07cb636 570 Pfam PF14461 Prokaryotic E2 family B 24 123 2.1E-10 T 23-10-2018 IPR032701 Prokaryotic E2 family B CDG62_04665 b157dca0e61bb1f0b0c870c67786b58d 331 SUPERFAMILY SSF46689 281 329 1.08E-10 T 23-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 CDG62_04665 b157dca0e61bb1f0b0c870c67786b58d 331 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 200 8.2E-20 T 23-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CDG62_04665 b157dca0e61bb1f0b0c870c67786b58d 331 SMART SM00342 244 327 4.3E-19 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_04665 b157dca0e61bb1f0b0c870c67786b58d 331 Pfam PF12833 Helix-turn-helix domain 251 329 1.8E-16 T 23-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CDG62_04665 b157dca0e61bb1f0b0c870c67786b58d 331 Gene3D G3DSA:1.10.10.60 225 331 1.3E-21 T 23-10-2018 CDG62_08750 2f5e03e846ce3c7c8962e8aa26df0ae8 187 Gene3D G3DSA:3.50.50.60 14 184 1.6E-5 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_08750 2f5e03e846ce3c7c8962e8aa26df0ae8 187 SUPERFAMILY SSF51905 22 183 9.44E-11 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_14060 0ef35d6079afe3e40ac0b26842e0a5fd 86 Pfam PF11391 Protein of unknown function (DUF2798) 19 74 4.8E-18 T 23-10-2018 IPR021529 Protein of unknown function DUF2798 CDG62_04410 48af48ce705cc0f70cfcbd40f7d42179 445 SUPERFAMILY SSF103473 17 432 1.44E-63 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_04410 48af48ce705cc0f70cfcbd40f7d42179 445 Gene3D G3DSA:1.20.1250.20 19 440 2.5E-57 T 23-10-2018 CDG62_04410 48af48ce705cc0f70cfcbd40f7d42179 445 Pfam PF07690 Major Facilitator Superfamily 62 390 8.4E-27 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_11145 dd640d7334703eed50216af775884216 440 SUPERFAMILY SSF56954 8 404 4.84E-40 T 23-10-2018 CDG62_11145 dd640d7334703eed50216af775884216 440 Gene3D G3DSA:1.20.1600.10 11 428 1.2E-34 T 23-10-2018 CDG62_11145 dd640d7334703eed50216af775884216 440 Pfam PF02321 Outer membrane efflux protein 33 208 1.8E-13 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_11145 dd640d7334703eed50216af775884216 440 Pfam PF02321 Outer membrane efflux protein 248 398 1.5E-12 T 23-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 CDG62_15645 46e59216ee576c2aae57ed07c2b547e5 163 SUPERFAMILY SSF143744 26 159 4.05E-32 T 23-10-2018 IPR038084 GlcG-like domain superfamily CDG62_15645 46e59216ee576c2aae57ed07c2b547e5 163 Pfam PF03928 Haem-degrading 32 157 1.5E-26 T 23-10-2018 IPR005624 Haem-degrading CDG62_15645 46e59216ee576c2aae57ed07c2b547e5 163 Gene3D G3DSA:3.30.450.150 16 160 2.2E-33 T 23-10-2018 IPR038084 GlcG-like domain superfamily CDG62_07765 09f7ad67623b2aa803569efa52bd7eaa 266 Pfam PF09844 Uncharacterized conserved protein (COG2071) 26 243 2.7E-34 T 23-10-2018 IPR018644 Protein of unknown function DUF2071 CDG62_14170 41e613b3fe66c8d14b20ff2bc4f7b0e8 343 Pfam PF00561 alpha/beta hydrolase fold 78 313 2.7E-21 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_14170 41e613b3fe66c8d14b20ff2bc4f7b0e8 343 PRINTS PR00111 Alpha/beta hydrolase fold signature 149 162 2.3E-10 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_14170 41e613b3fe66c8d14b20ff2bc4f7b0e8 343 PRINTS PR00111 Alpha/beta hydrolase fold signature 270 284 2.3E-10 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_14170 41e613b3fe66c8d14b20ff2bc4f7b0e8 343 PRINTS PR00111 Alpha/beta hydrolase fold signature 163 176 2.3E-10 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_14170 41e613b3fe66c8d14b20ff2bc4f7b0e8 343 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 118 2.3E-10 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_14170 41e613b3fe66c8d14b20ff2bc4f7b0e8 343 Gene3D G3DSA:3.40.50.1820 37 333 1.1E-74 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_14170 41e613b3fe66c8d14b20ff2bc4f7b0e8 343 SUPERFAMILY SSF53474 52 326 1.76E-48 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_11925 11a803eed751f4e542d105e31b31f6b5 250 Pfam PF03591 AzlC protein 24 163 8.9E-33 T 23-10-2018 IPR011606 Branched-chain amino acid transport, permease CDG62_15570 013a36eaec622202b301a7a4c48f8bea 165 Pfam PF16036 Chalcone isomerase-like 59 163 7.0E-11 T 23-10-2018 IPR016087 Chalcone isomerase GO:0016872 CDG62_12005 df1a218994cdc32cd11a56281c78e3b3 232 Pfam PF01988 VIT family 18 225 4.9E-54 T 23-10-2018 IPR008217 Ccc1 family CDG62_04585 5bc0a0b50ed973469a3cdfe0944de2c9 211 Pfam PF05494 MlaC protein 35 197 1.8E-37 T 23-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CDG62_04585 5bc0a0b50ed973469a3cdfe0944de2c9 211 PIRSF PIRSF004649 1 211 2.8E-57 T 23-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CDG62_04585 5bc0a0b50ed973469a3cdfe0944de2c9 211 Gene3D G3DSA:3.10.450.710 27 208 1.0E-47 T 23-10-2018 CDG62_05580 2b1cdba34b05e66d59987946193b8243 388 Pfam PF00487 Fatty acid desaturase 42 263 9.3E-19 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CDG62_05580 2b1cdba34b05e66d59987946193b8243 388 PIRSF PIRSF000345 5 364 6.1E-99 T 23-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 CDG62_05580 2b1cdba34b05e66d59987946193b8243 388 PRINTS PR00075 Fatty acid desaturase family 1 signature 189 210 1.2E-30 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG62_05580 2b1cdba34b05e66d59987946193b8243 388 PRINTS PR00075 Fatty acid desaturase family 1 signature 100 129 1.2E-30 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG62_05580 2b1cdba34b05e66d59987946193b8243 388 PRINTS PR00075 Fatty acid desaturase family 1 signature 12 32 1.2E-30 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG62_05580 2b1cdba34b05e66d59987946193b8243 388 PRINTS PR00075 Fatty acid desaturase family 1 signature 232 246 1.2E-30 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG62_05580 2b1cdba34b05e66d59987946193b8243 388 PRINTS PR00075 Fatty acid desaturase family 1 signature 62 82 1.2E-30 T 23-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 CDG62_03995 3a4f9e632481b771835b57fa0446b6f7 299 SUPERFAMILY SSF103481 45 142 4.71E-12 T 23-10-2018 CDG62_03995 3a4f9e632481b771835b57fa0446b6f7 299 SUPERFAMILY SSF103481 188 287 3.92E-11 T 23-10-2018 CDG62_03995 3a4f9e632481b771835b57fa0446b6f7 299 Pfam PF00892 EamA-like transporter family 151 282 2.6E-12 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_03995 3a4f9e632481b771835b57fa0446b6f7 299 Pfam PF00892 EamA-like transporter family 11 140 2.1E-14 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_04640 57335629941e66ba1babb0ac2cf209c3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 77 102 2.4E-55 T 23-10-2018 CDG62_04640 57335629941e66ba1babb0ac2cf209c3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 2.4E-55 T 23-10-2018 CDG62_04640 57335629941e66ba1babb0ac2cf209c3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 2.4E-55 T 23-10-2018 CDG62_04640 57335629941e66ba1babb0ac2cf209c3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 2.4E-55 T 23-10-2018 CDG62_04640 57335629941e66ba1babb0ac2cf209c3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 47 67 2.4E-55 T 23-10-2018 CDG62_04640 57335629941e66ba1babb0ac2cf209c3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 229 248 2.4E-55 T 23-10-2018 CDG62_04640 57335629941e66ba1babb0ac2cf209c3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 2.4E-55 T 23-10-2018 CDG62_04640 57335629941e66ba1babb0ac2cf209c3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 2.4E-55 T 23-10-2018 CDG62_04640 57335629941e66ba1babb0ac2cf209c3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 2.4E-55 T 23-10-2018 CDG62_04640 57335629941e66ba1babb0ac2cf209c3 419 SUPERFAMILY SSF118215 3 403 3.14E-108 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG62_04640 57335629941e66ba1babb0ac2cf209c3 419 Gene3D G3DSA:1.10.3860.10 1 413 1.6E-126 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG62_04640 57335629941e66ba1babb0ac2cf209c3 419 Pfam PF00375 Sodium:dicarboxylate symporter family 3 403 1.2E-120 T 23-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CDG62_06725 e3145315fa754a4d03caa98c72a42902 204 Pfam PF09335 SNARE associated Golgi protein 32 162 3.5E-23 T 23-10-2018 IPR032816 SNARE associated Golgi protein CDG62_13330 186c75f6133b14013e218c7ee49737fd 181 Pfam PF03029 Conserved hypothetical ATP binding protein 30 144 9.5E-8 T 23-10-2018 IPR004130 GPN-loop GTPase CDG62_13330 186c75f6133b14013e218c7ee49737fd 181 Gene3D G3DSA:3.40.50.300 3 179 9.5E-20 T 23-10-2018 CDG62_13330 186c75f6133b14013e218c7ee49737fd 181 SUPERFAMILY SSF52540 5 172 2.68E-20 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_05775 df11abc9b90558afad69809200f3340b 182 Gene3D G3DSA:3.40.50.300 2 182 1.1E-17 T 23-10-2018 CDG62_05775 df11abc9b90558afad69809200f3340b 182 Pfam PF03029 Conserved hypothetical ATP binding protein 32 132 1.4E-6 T 23-10-2018 IPR004130 GPN-loop GTPase CDG62_05775 df11abc9b90558afad69809200f3340b 182 SUPERFAMILY SSF52540 5 174 5.65E-20 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_05810 f6c3e5058e1ade55678353ad149c6fac 128 Pfam PF00380 Ribosomal protein S9/S16 8 128 1.5E-43 T 23-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CDG62_05810 f6c3e5058e1ade55678353ad149c6fac 128 Gene3D G3DSA:3.30.230.10 2 128 1.0E-49 T 23-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDG62_05810 f6c3e5058e1ade55678353ad149c6fac 128 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 128 30.82 T 23-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid CDG62_05810 f6c3e5058e1ade55678353ad149c6fac 128 SUPERFAMILY SSF54211 4 128 3.41E-46 T 23-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CDG62_05810 f6c3e5058e1ade55678353ad149c6fac 128 ProSitePatterns PS00360 Ribosomal protein S9 signature. 67 85 - T 23-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CDG62_14750 8d6ae6b78c4094ce7e85d3f356be3bbd 157 Gene3D G3DSA:2.40.50.140 77 156 1.0E-8 T 23-10-2018 CDG62_14750 8d6ae6b78c4094ce7e85d3f356be3bbd 157 Pfam PF01957 NfeD-like C-terminal, partner-binding 9 149 1.7E-16 T 23-10-2018 IPR002810 NfeD-like, C-terminal domain CDG62_14750 8d6ae6b78c4094ce7e85d3f356be3bbd 157 SUPERFAMILY SSF141322 81 149 1.12E-5 T 23-10-2018 CDG62_14845 d316fff44e498f3ba913717204234ebf 25 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 3 25 0.0024 T 23-10-2018 CDG62_02070 534b6e8b69aebc48ce3b798ee595d4d6 108 Gene3D G3DSA:4.10.430.10 52 108 4.8E-15 T 23-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 CDG62_02070 534b6e8b69aebc48ce3b798ee595d4d6 108 SUPERFAMILY SSF81273 67 107 4.71E-11 T 23-10-2018 CDG62_02070 534b6e8b69aebc48ce3b798ee595d4d6 108 SMART SM00528 62 107 8.6E-11 T 23-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CDG62_02070 534b6e8b69aebc48ce3b798ee595d4d6 108 Pfam PF00816 H-NS histone family 10 101 1.7E-19 T 23-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CDG62_07655 e752828209231b32573a786aa9ed6bb2 607 Gene3D G3DSA:1.20.1530.20 9 390 8.4E-81 T 23-10-2018 IPR038770 Sodium/solute symporter superfamily CDG62_07655 e752828209231b32573a786aa9ed6bb2 607 SUPERFAMILY SSF51735 406 535 2.35E-28 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_07655 e752828209231b32573a786aa9ed6bb2 607 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 18 289 1.3E-79 T 23-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CDG62_07655 e752828209231b32573a786aa9ed6bb2 607 PRINTS PR00335 TrkA potassium uptake protein signature 452 462 4.3E-7 T 23-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CDG62_07655 e752828209231b32573a786aa9ed6bb2 607 PRINTS PR00335 TrkA potassium uptake protein signature 423 437 4.3E-7 T 23-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CDG62_07655 e752828209231b32573a786aa9ed6bb2 607 PRINTS PR00335 TrkA potassium uptake protein signature 406 420 4.3E-7 T 23-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CDG62_07655 e752828209231b32573a786aa9ed6bb2 607 PRINTS PR00335 TrkA potassium uptake protein signature 463 473 4.3E-7 T 23-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CDG62_07655 e752828209231b32573a786aa9ed6bb2 607 Pfam PF00999 Sodium/hydrogen exchanger family 15 376 3.5E-71 T 23-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CDG62_07655 e752828209231b32573a786aa9ed6bb2 607 Pfam PF02254 TrkA-N domain 408 519 3.4E-18 T 23-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CDG62_07655 e752828209231b32573a786aa9ed6bb2 607 Gene3D G3DSA:3.40.50.720 405 565 2.7E-30 T 23-10-2018 CDG62_13250 3a7c3a39022827bd801ca481c9107905 278 Gene3D G3DSA:3.20.20.220 1 278 1.3E-89 T 23-10-2018 CDG62_13250 3a7c3a39022827bd801ca481c9107905 278 Pfam PF02219 Methylenetetrahydrofolate reductase 3 276 7.0E-79 T 23-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CDG62_13250 3a7c3a39022827bd801ca481c9107905 278 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 7 275 2.3E-89 T 23-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 CDG62_13250 3a7c3a39022827bd801ca481c9107905 278 SUPERFAMILY SSF51730 3 277 1.88E-86 T 23-10-2018 IPR029041 FAD-linked oxidoreductase-like CDG62_01430 6a8bfe815c712749f638fc25b2395d3e 353 Pfam PF02195 ParB-like nuclease domain 61 151 1.4E-15 T 23-10-2018 IPR003115 ParB/Sulfiredoxin CDG62_01430 6a8bfe815c712749f638fc25b2395d3e 353 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 58 230 2.3E-22 T 23-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CDG62_01430 6a8bfe815c712749f638fc25b2395d3e 353 SUPERFAMILY SSF110849 60 155 3.84E-18 T 23-10-2018 IPR036086 ParB/Sulfiredoxin superfamily CDG62_01430 6a8bfe815c712749f638fc25b2395d3e 353 SMART SM00470 60 153 1.8E-15 T 23-10-2018 IPR003115 ParB/Sulfiredoxin CDG62_01430 6a8bfe815c712749f638fc25b2395d3e 353 Gene3D G3DSA:3.90.1530.30 73 137 2.2E-14 T 23-10-2018 CDG62_18815 988ef54f8bd209ad174d34078f21d8ac 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 156 30.879 T 23-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_18815 988ef54f8bd209ad174d34078f21d8ac 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 152 1.6E-52 T 23-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_18815 988ef54f8bd209ad174d34078f21d8ac 156 Gene3D G3DSA:3.40.50.960 3 156 5.5E-59 T 23-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_18815 988ef54f8bd209ad174d34078f21d8ac 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 153 9.8E-56 T 23-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_18815 988ef54f8bd209ad174d34078f21d8ac 156 SUPERFAMILY SSF52121 10 156 1.14E-59 T 23-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CDG62_01655 4e38f631de3db5b41bc2b27c67876c21 156 Pfam PF10517 Electron transfer DM13 60 155 4.0E-20 T 23-10-2018 IPR019545 DM13 domain CDG62_14105 36c9c465ffdbccfe8cb73eb6aa645e91 168 Gene3D G3DSA:3.40.50.1820 5 165 1.2E-15 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_14105 36c9c465ffdbccfe8cb73eb6aa645e91 168 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 93 1.4E-7 T 23-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CDG62_14105 36c9c465ffdbccfe8cb73eb6aa645e91 168 SUPERFAMILY SSF53474 7 159 7.41E-9 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_07165 85f8cdf4896d1c1922ce32a80a4405a5 127 Pfam PF02036 SCP-2 sterol transfer family 37 108 4.4E-7 T 23-10-2018 IPR003033 SCP2 sterol-binding domain CDG62_07165 85f8cdf4896d1c1922ce32a80a4405a5 127 Gene3D G3DSA:3.30.1050.10 21 118 2.6E-12 T 23-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CDG62_07165 85f8cdf4896d1c1922ce32a80a4405a5 127 SUPERFAMILY SSF55718 5 108 4.0E-11 T 23-10-2018 IPR036527 SCP2 sterol-binding domain superfamily CDG62_15520 bc7abcb923ca1c0edf6b8cc5fa4a0faf 378 Gene3D G3DSA:1.25.40.10 8 128 6.7E-14 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_15520 bc7abcb923ca1c0edf6b8cc5fa4a0faf 378 SUPERFAMILY SSF48452 23 108 3.8E-12 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_04345 552cd4602b29ff02a1fa239c97ace0cb 123 Gene3D G3DSA:2.30.30.790 10 121 2.1E-15 T 23-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04345 552cd4602b29ff02a1fa239c97ace0cb 123 PRINTS PR00061 Ribosomal protein L19 signature 37 66 2.2E-41 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04345 552cd4602b29ff02a1fa239c97ace0cb 123 PRINTS PR00061 Ribosomal protein L19 signature 91 116 2.2E-41 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04345 552cd4602b29ff02a1fa239c97ace0cb 123 PRINTS PR00061 Ribosomal protein L19 signature 7 36 2.2E-41 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04345 552cd4602b29ff02a1fa239c97ace0cb 123 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 23-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CDG62_04345 552cd4602b29ff02a1fa239c97ace0cb 123 Pfam PF01245 Ribosomal protein L19 7 116 7.9E-51 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04345 552cd4602b29ff02a1fa239c97ace0cb 123 PIRSF PIRSF002191 1 123 1.3E-51 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04345 552cd4602b29ff02a1fa239c97ace0cb 123 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 7 116 1.7E-50 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_04345 552cd4602b29ff02a1fa239c97ace0cb 123 SUPERFAMILY SSF50104 6 118 1.1E-46 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily CDG62_04345 552cd4602b29ff02a1fa239c97ace0cb 123 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 5 117 30.85 T 23-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CDG62_08840 878435525ab17c5a46a9c70193a50fbb 147 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 10 118 1.8E-10 T 23-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG62_08840 878435525ab17c5a46a9c70193a50fbb 147 SUPERFAMILY SSF55083 8 131 2.75E-14 T 23-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG62_08840 878435525ab17c5a46a9c70193a50fbb 147 Gene3D G3DSA:3.30.70.560 6 137 6.1E-11 T 23-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CDG62_10835 7fe6d6471d3052c7cebe3763932e8f0f 186 Gene3D G3DSA:1.10.530.10 49 184 1.7E-27 T 23-10-2018 CDG62_10835 7fe6d6471d3052c7cebe3763932e8f0f 186 Pfam PF01464 Transglycosylase SLT domain 67 174 1.5E-18 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 CDG62_10835 7fe6d6471d3052c7cebe3763932e8f0f 186 SUPERFAMILY SSF53955 52 183 8.44E-30 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG62_09430 f8cb86955d1dd3a78eee5f30a9f59ead 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 7.3E-8 T 23-10-2018 CDG62_09430 f8cb86955d1dd3a78eee5f30a9f59ead 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 7.3E-8 T 23-10-2018 CDG62_09430 f8cb86955d1dd3a78eee5f30a9f59ead 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 7.3E-8 T 23-10-2018 CDG62_09430 f8cb86955d1dd3a78eee5f30a9f59ead 433 SUPERFAMILY SSF51905 9 324 1.18E-30 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_09430 f8cb86955d1dd3a78eee5f30a9f59ead 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 3.7E-12 T 23-10-2018 CDG62_09430 f8cb86955d1dd3a78eee5f30a9f59ead 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 119 137 3.7E-12 T 23-10-2018 CDG62_09430 f8cb86955d1dd3a78eee5f30a9f59ead 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 3.7E-12 T 23-10-2018 CDG62_09430 f8cb86955d1dd3a78eee5f30a9f59ead 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 3.7E-12 T 23-10-2018 CDG62_09430 f8cb86955d1dd3a78eee5f30a9f59ead 433 Gene3D G3DSA:3.50.50.100 2 415 4.4E-109 T 23-10-2018 CDG62_09430 f8cb86955d1dd3a78eee5f30a9f59ead 433 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 342 6.3E-55 T 23-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CDG62_11275 419a47af19bff6aeb71092d5ee8905a3 216 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 9 211 9.2E-91 T 23-10-2018 IPR017791 Urea carboxylase-associated protein 1 CDG62_11275 419a47af19bff6aeb71092d5ee8905a3 216 Pfam PF09347 Domain of unknown function (DUF1989) 15 186 1.6E-61 T 23-10-2018 IPR018959 Protein of unknown function DUF1989 CDG62_11520 d6a32fc7d10dfb947510b6ba112ae131 246 PIRSF PIRSF003073 1 243 3.4E-58 T 23-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CDG62_11520 d6a32fc7d10dfb947510b6ba112ae131 246 Gene3D G3DSA:3.40.50.300 61 242 3.1E-35 T 23-10-2018 CDG62_11520 d6a32fc7d10dfb947510b6ba112ae131 246 SUPERFAMILY SSF52540 67 233 3.22E-16 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_11520 d6a32fc7d10dfb947510b6ba112ae131 246 Pfam PF01695 IstB-like ATP binding protein 53 228 1.5E-44 T 23-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CDG62_11540 8a6d675579af457f3c7691df5fe88f52 68 Pfam PF01381 Helix-turn-helix 12 62 3.6E-12 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_11540 8a6d675579af457f3c7691df5fe88f52 68 SUPERFAMILY SSF47413 2 67 2.48E-15 T 23-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 CDG62_11540 8a6d675579af457f3c7691df5fe88f52 68 Gene3D G3DSA:1.10.260.40 1 68 7.6E-18 T 23-10-2018 CDG62_11540 8a6d675579af457f3c7691df5fe88f52 68 SMART SM00530 11 66 4.2E-9 T 23-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CDG62_07035 3e3b0e00bcf0f3a75d2bd9f14f144df1 152 Gene3D G3DSA:1.20.5.1230 9 152 2.3E-7 T 23-10-2018 CDG62_07035 3e3b0e00bcf0f3a75d2bd9f14f144df1 152 SUPERFAMILY SSF58113 19 143 2.35E-6 T 23-10-2018 CDG62_09090 c20b033a2f6cf6944b2ffd218ff33bbc 243 Gene3D G3DSA:3.40.50.1240 26 209 1.3E-9 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG62_09090 c20b033a2f6cf6944b2ffd218ff33bbc 243 SUPERFAMILY SSF53254 27 196 2.23E-14 T 23-10-2018 IPR029033 Histidine phosphatase superfamily CDG62_09090 c20b033a2f6cf6944b2ffd218ff33bbc 243 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 28 94 1.6E-6 T 23-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CDG62_01990 c6af27c0703ab22c9653818e927d2b4f 365 SUPERFAMILY SSF52402 26 272 3.29E-11 T 23-10-2018 CDG62_14070 e07e0d9533fec1efc27d16130d3cdbe9 173 SUPERFAMILY SSF46785 31 160 2.28E-20 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_14070 e07e0d9533fec1efc27d16130d3cdbe9 173 Pfam PF03551 Transcriptional regulator PadR-like family 35 103 9.2E-14 T 23-10-2018 IPR005149 Transcription regulator PadR, N-terminal CDG62_14070 e07e0d9533fec1efc27d16130d3cdbe9 173 Gene3D G3DSA:1.10.10.10 19 129 2.6E-19 T 23-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily CDG62_06020 a4e705126b5303f6687a23bcd99382c4 307 Pfam PF03547 Membrane transport protein 3 145 3.5E-15 T 23-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CDG62_06020 a4e705126b5303f6687a23bcd99382c4 307 Pfam PF03547 Membrane transport protein 155 301 2.9E-11 T 23-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 CDG62_07155 7700bb4c4d6677ab4b34733cd98d479b 288 Pfam PF01464 Transglycosylase SLT domain 94 199 2.0E-31 T 23-10-2018 IPR008258 Transglycosylase SLT domain 1 CDG62_07155 7700bb4c4d6677ab4b34733cd98d479b 288 Gene3D G3DSA:1.10.530.10 44 215 3.7E-49 T 23-10-2018 CDG62_07155 7700bb4c4d6677ab4b34733cd98d479b 288 SUPERFAMILY SSF53955 87 210 5.04E-48 T 23-10-2018 IPR023346 Lysozyme-like domain superfamily CDG62_07200 cde2fbe86b546d9dddeed1a8299f18bc 382 Pfam PF07786 Protein of unknown function (DUF1624) 7 237 5.1E-16 T 23-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 CDG62_01330 055962547e607b37188801beb1429368 62 Gene3D G3DSA:3.30.70.100 1 61 6.7E-19 T 23-10-2018 CDG62_01330 055962547e607b37188801beb1429368 62 Pfam PF00403 Heavy-metal-associated domain 3 59 1.3E-11 T 23-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CDG62_01330 055962547e607b37188801beb1429368 62 SUPERFAMILY SSF55008 2 61 4.97E-14 T 23-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 CDG62_07505 0cc6cbc680e94b45c06190361136a23c 402 Gene3D G3DSA:1.20.1250.20 10 399 1.3E-46 T 23-10-2018 CDG62_07505 0cc6cbc680e94b45c06190361136a23c 402 SUPERFAMILY SSF103473 4 394 2.09E-55 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_07505 0cc6cbc680e94b45c06190361136a23c 402 Pfam PF07690 Major Facilitator Superfamily 20 359 9.8E-34 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_10955 a7f2dd49acd7e718c620cfa99ad84260 298 SMART SM00382 55 234 3.3E-16 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_10955 a7f2dd49acd7e718c620cfa99ad84260 298 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 23-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CDG62_10955 a7f2dd49acd7e718c620cfa99ad84260 298 Gene3D G3DSA:3.40.50.300 24 295 6.9E-66 T 23-10-2018 CDG62_10955 a7f2dd49acd7e718c620cfa99ad84260 298 Pfam PF00005 ABC transporter 46 185 1.6E-28 T 23-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CDG62_10955 a7f2dd49acd7e718c620cfa99ad84260 298 SUPERFAMILY SSF52540 27 254 2.59E-71 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_07545 ece41f33b0442981acd46659d7a1a274 105 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 99 5.2E-21 T 23-10-2018 IPR008407 Branched-chain amino acid transport, AzlD CDG62_10105 1402e815e49231088732ac4f3c5b9a5f 338 SUPERFAMILY SSF56112 6 310 2.25E-44 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_10105 1402e815e49231088732ac4f3c5b9a5f 338 Gene3D G3DSA:3.30.200.20 1 92 5.9E-25 T 23-10-2018 CDG62_10105 1402e815e49231088732ac4f3c5b9a5f 338 Gene3D G3DSA:3.90.1200.10 93 332 2.6E-66 T 23-10-2018 CDG62_10105 1402e815e49231088732ac4f3c5b9a5f 338 Pfam PF01636 Phosphotransferase enzyme family 23 243 1.4E-24 T 23-10-2018 IPR002575 Aminoglycoside phosphotransferase CDG62_10740 07ea13b9fb05c4e7a8081a3b1154a5b2 283 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 34 181 8.6E-14 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG62_10740 07ea13b9fb05c4e7a8081a3b1154a5b2 283 Gene3D G3DSA:3.40.50.300 17 195 8.8E-27 T 23-10-2018 CDG62_10740 07ea13b9fb05c4e7a8081a3b1154a5b2 283 SMART SM00382 30 188 4.7E-8 T 23-10-2018 IPR003593 AAA+ ATPase domain CDG62_10740 07ea13b9fb05c4e7a8081a3b1154a5b2 283 SUPERFAMILY SSF52540 18 251 4.36E-36 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_11020 f56949878e59f257ed49aa09735ed0a1 312 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 26 241 8.7E-23 T 23-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region CDG62_11020 f56949878e59f257ed49aa09735ed0a1 312 Gene3D G3DSA:2.120.10.30 10 296 1.5E-29 T 23-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDG62_11020 f56949878e59f257ed49aa09735ed0a1 312 SUPERFAMILY SSF63829 20 311 8.07E-40 T 23-10-2018 CDG62_10685 612eba6ad5b28a30e63102fff7a8c9bc 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.2E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10685 612eba6ad5b28a30e63102fff7a8c9bc 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 1.2E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10685 612eba6ad5b28a30e63102fff7a8c9bc 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.2E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10685 612eba6ad5b28a30e63102fff7a8c9bc 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.2E-9 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_10685 612eba6ad5b28a30e63102fff7a8c9bc 239 SUPERFAMILY SSF51735 4 218 5.33E-25 T 23-10-2018 IPR036291 NAD(P)-binding domain superfamily CDG62_10685 612eba6ad5b28a30e63102fff7a8c9bc 239 Gene3D G3DSA:3.40.50.720 2 227 6.3E-26 T 23-10-2018 CDG62_10685 612eba6ad5b28a30e63102fff7a8c9bc 239 Pfam PF00106 short chain dehydrogenase 7 191 1.4E-20 T 23-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CDG62_05005 ff1c90ae0170fc61c7ba92a8ef49be4a 220 Gene3D G3DSA:3.90.730.10 39 219 3.5E-10 T 23-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CDG62_05005 ff1c90ae0170fc61c7ba92a8ef49be4a 220 SUPERFAMILY SSF55895 40 215 3.79E-14 T 23-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CDG62_02130 402210841b0395db3b72e66ce8f8a43b 263 Pfam PF05857 TraX protein 21 259 1.9E-42 T 23-10-2018 IPR008875 TraX CDG62_03715 682b2601c322311e19408a930bb76c17 110 Pfam PF04341 Protein of unknown function, DUF485 11 95 9.1E-30 T 23-10-2018 IPR007436 Protein of unknown function DUF485 CDG62_08525 d7f94aecba6f1e73617354e5077cb84f 239 Pfam PF08291 Peptidase M15 139 179 3.2E-6 T 23-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 CDG62_08525 d7f94aecba6f1e73617354e5077cb84f 239 Gene3D G3DSA:3.30.1380.10 94 229 1.2E-5 T 23-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDG62_08525 d7f94aecba6f1e73617354e5077cb84f 239 SUPERFAMILY SSF55166 100 231 5.49E-16 T 23-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CDG62_14255 d33a204cb92128cf280ae8e809d62ae4 425 Gene3D G3DSA:1.20.1250.20 12 424 4.6E-55 T 23-10-2018 CDG62_14255 d33a204cb92128cf280ae8e809d62ae4 425 SUPERFAMILY SSF103473 11 417 2.88E-58 T 23-10-2018 IPR036259 MFS transporter superfamily CDG62_14255 d33a204cb92128cf280ae8e809d62ae4 425 Pfam PF07690 Major Facilitator Superfamily 60 383 1.8E-27 T 23-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CDG62_11350 d7f5c025c093510ece3548b23da6b8a0 397 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 1 397 32.846 T 23-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 CDG62_11350 d7f5c025c093510ece3548b23da6b8a0 397 Gene3D G3DSA:1.10.3860.10 2 397 6.4E-69 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG62_11350 d7f5c025c093510ece3548b23da6b8a0 397 Pfam PF00375 Sodium:dicarboxylate symporter family 10 394 2.6E-62 T 23-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CDG62_11350 d7f5c025c093510ece3548b23da6b8a0 397 SUPERFAMILY SSF118215 10 394 2.09E-88 T 23-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 CDG62_11350 d7f5c025c093510ece3548b23da6b8a0 397 PRINTS PR00173 Glutamate-aspartate symporter signature 318 337 6.7E-15 T 23-10-2018 CDG62_11350 d7f5c025c093510ece3548b23da6b8a0 397 PRINTS PR00173 Glutamate-aspartate symporter signature 3 28 6.7E-15 T 23-10-2018 CDG62_11350 d7f5c025c093510ece3548b23da6b8a0 397 PRINTS PR00173 Glutamate-aspartate symporter signature 283 309 6.7E-15 T 23-10-2018 CDG62_11350 d7f5c025c093510ece3548b23da6b8a0 397 PRINTS PR00173 Glutamate-aspartate symporter signature 216 235 6.7E-15 T 23-10-2018 CDG62_11350 d7f5c025c093510ece3548b23da6b8a0 397 PRINTS PR00173 Glutamate-aspartate symporter signature 181 200 6.7E-15 T 23-10-2018 CDG62_07120 f80486302c074703087a7785999cf4ab 124 Gene3D G3DSA:1.10.3830.10 8 124 2.8E-36 T 23-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CDG62_07120 f80486302c074703087a7785999cf4ab 124 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 122 1.1E-31 T 23-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CDG62_00840 d66e50e53cc238f1e0ed70ac81bc75d9 109 Pfam PF14020 Protein of unknown function (DUF4236) 3 57 2.3E-21 T 23-10-2018 IPR025330 Domain of unknown function DUF4236 CDG62_16955 cd4fd86be9b2fc9df0864bad0979ba22 350 Pfam PF13387 Domain of unknown function (DUF4105) 136 291 1.2E-42 T 23-10-2018 IPR025178 Domain of unknown function DUF4105 CDG62_13520 86aafdbe01f119c83aa04b888cd0c5f6 351 SUPERFAMILY SSF161098 117 329 1.83E-11 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_13520 86aafdbe01f119c83aa04b888cd0c5f6 351 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 136 343 4.1E-31 T 23-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 CDG62_13520 86aafdbe01f119c83aa04b888cd0c5f6 351 Gene3D G3DSA:1.10.3720.10 107 340 4.4E-14 T 23-10-2018 IPR035906 MetI-like superfamily CDG62_05575 195c88c60e178599c517e9e78024f382 109 SUPERFAMILY SSF51182 30 104 5.24E-7 T 23-10-2018 IPR011051 RmlC-like cupin domain superfamily CDG62_07825 85340d3a5d6db17c8563599d5da89ff7 182 SUPERFAMILY SSF48452 84 176 1.11E-7 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_07825 85340d3a5d6db17c8563599d5da89ff7 182 Gene3D G3DSA:1.25.40.10 60 181 9.3E-9 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_07160 450be19c3db4f9fdff0c6d891f2526d0 307 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 17 279 55.041 T 23-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 CDG62_07160 450be19c3db4f9fdff0c6d891f2526d0 307 Pfam PF01171 PP-loop family 49 212 1.5E-14 T 23-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CDG62_07160 450be19c3db4f9fdff0c6d891f2526d0 307 SUPERFAMILY SSF52402 26 242 4.89E-53 T 23-10-2018 CDG62_07160 450be19c3db4f9fdff0c6d891f2526d0 307 PIRSF PIRSF004976 6 299 1.1E-69 T 23-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 CDG62_07160 450be19c3db4f9fdff0c6d891f2526d0 307 Gene3D G3DSA:3.40.50.620 21 297 1.0E-44 T 23-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDG62_13090 8f7a3d5e53b774f0e3c0aac47f545b0c 258 Gene3D G3DSA:3.40.1280.10 114 258 6.2E-45 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG62_13090 8f7a3d5e53b774f0e3c0aac47f545b0c 258 SUPERFAMILY SSF55315 5 104 3.06E-15 T 23-10-2018 IPR029064 50S ribosomal protein L30e-like CDG62_13090 8f7a3d5e53b774f0e3c0aac47f545b0c 258 SUPERFAMILY SSF75217 116 258 3.86E-36 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG62_13090 8f7a3d5e53b774f0e3c0aac47f545b0c 258 Pfam PF00588 SpoU rRNA Methylase family 117 250 1.4E-30 T 23-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CDG62_13090 8f7a3d5e53b774f0e3c0aac47f545b0c 258 Gene3D G3DSA:3.30.1330.30 5 105 6.8E-10 T 23-10-2018 IPR029064 50S ribosomal protein L30e-like CDG62_15270 400743d3cff950f82d36239fbf833ada 334 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 322 8.8E-97 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CDG62_15270 400743d3cff950f82d36239fbf833ada 334 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 4 327 2.2E-45 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CDG62_01455 0ba46fc5e5cd86ae39e3f61d1cdc1410 269 Pfam PF16932 Type IV secretory system, conjugal DNA-protein transfer 35 247 1.5E-41 T 23-10-2018 IPR031618 Putative type IV secretory system protein CDG62_03400 0c0d464db5d07bbb0d43dd650f38e908 357 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 38 347 1.1E-133 T 23-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC CDG62_03400 0c0d464db5d07bbb0d43dd650f38e908 357 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 336 2.5E-41 T 23-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 CDG62_01270 e838310baa287631cfae0857f7fcdacd 189 Pfam PF07366 SnoaL-like polyketide cyclase 62 187 5.2E-12 T 23-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 CDG62_01270 e838310baa287631cfae0857f7fcdacd 189 Gene3D G3DSA:3.10.450.50 59 189 5.0E-18 T 23-10-2018 CDG62_01270 e838310baa287631cfae0857f7fcdacd 189 SUPERFAMILY SSF54427 58 187 1.35E-15 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG62_11645 5e7979411f2fc8ef94b79a7c819a4e37 116 SUPERFAMILY SSF75169 1 116 1.74E-8 T 23-10-2018 IPR027396 DsrEFH-like CDG62_11645 5e7979411f2fc8ef94b79a7c819a4e37 116 Gene3D G3DSA:3.40.1260.10 1 115 3.5E-17 T 23-10-2018 IPR027396 DsrEFH-like CDG62_00105 78af9e0ddd61f9afe3f76ff6dbb8f5b5 110 SUPERFAMILY SSF46785 11 71 4.18E-5 T 23-10-2018 IPR036390 Winged helix DNA-binding domain superfamily CDG62_00105 78af9e0ddd61f9afe3f76ff6dbb8f5b5 110 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 19 28 - T 23-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 CDG62_15160 01ed6a0e9e971c56cdd4bea47946898b 226 Pfam PF01144 Coenzyme A transferase 8 218 3.8E-74 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_15160 01ed6a0e9e971c56cdd4bea47946898b 226 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 8.6E-123 T 23-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CDG62_15160 01ed6a0e9e971c56cdd4bea47946898b 226 Gene3D G3DSA:3.40.1080.10 1 218 4.5E-80 T 23-10-2018 CDG62_15160 01ed6a0e9e971c56cdd4bea47946898b 226 SMART SM00882 6 219 7.1E-82 T 23-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 CDG62_15160 01ed6a0e9e971c56cdd4bea47946898b 226 SUPERFAMILY SSF100950 2 222 5.98E-80 T 23-10-2018 IPR037171 NagB/RpiA transferase-like CDG62_15160 01ed6a0e9e971c56cdd4bea47946898b 226 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 23-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 CDG62_16080 eb5b589d0ba89dc883618740037c98ff 369 Pfam PF05987 Bacterial protein of unknown function (DUF898) 39 362 1.7E-79 T 23-10-2018 IPR010295 Protein of unknown function DUF898 CDG62_04185 e5ea47c5b44ef01195d96153cc69bcbe 245 PIRSF PIRSF016482 20 239 7.5E-59 T 23-10-2018 IPR007445 Pilus assembly protein, PilO CDG62_04185 e5ea47c5b44ef01195d96153cc69bcbe 245 Pfam PF04350 Pilus assembly protein, PilO 74 220 3.0E-51 T 23-10-2018 IPR007445 Pilus assembly protein, PilO CDG62_04185 e5ea47c5b44ef01195d96153cc69bcbe 245 Gene3D G3DSA:3.30.70.60 118 229 3.0E-34 T 23-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CDG62_15850 ce2c5d508869fe07315a14f65f3a59fc 150 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 149 32.781 T 23-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 CDG62_15850 ce2c5d508869fe07315a14f65f3a59fc 150 Gene3D G3DSA:2.70.40.10 1 150 3.0E-53 T 23-10-2018 IPR036157 dUTPase-like superfamily CDG62_15850 ce2c5d508869fe07315a14f65f3a59fc 150 SUPERFAMILY SSF51283 3 149 1.96E-52 T 23-10-2018 IPR036157 dUTPase-like superfamily CDG62_15850 ce2c5d508869fe07315a14f65f3a59fc 150 Pfam PF00692 dUTPase 15 148 4.3E-39 T 23-10-2018 IPR029054 dUTPase-like CDG62_15850 ce2c5d508869fe07315a14f65f3a59fc 150 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 149 9.2E-49 T 23-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 CDG62_06290 f8f5b833738af90834cd80c081b827de 293 Pfam PF01618 MotA/TolQ/ExbB proton channel family 152 266 8.9E-35 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CDG62_04920 770b79deb8ec9f9187b189ff307b6b7b 214 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 7 199 4.2E-47 T 23-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 CDG62_04920 770b79deb8ec9f9187b189ff307b6b7b 214 Gene3D G3DSA:3.90.850.10 1 208 1.2E-63 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDG62_04920 770b79deb8ec9f9187b189ff307b6b7b 214 SUPERFAMILY SSF56529 5 202 7.85E-62 T 23-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 CDG62_03645 c3a32bfd3f6351cb95132d068baae678 236 Pfam PF04452 RNA methyltransferase 21 233 1.6E-42 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDG62_03645 c3a32bfd3f6351cb95132d068baae678 236 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 5 230 1.8E-29 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDG62_03645 c3a32bfd3f6351cb95132d068baae678 236 PIRSF PIRSF015601 1 235 2.4E-45 T 23-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 CDG62_03645 c3a32bfd3f6351cb95132d068baae678 236 SUPERFAMILY SSF75217 73 233 9.16E-34 T 23-10-2018 IPR029028 Alpha/beta knot methyltransferases CDG62_03645 c3a32bfd3f6351cb95132d068baae678 236 Gene3D G3DSA:3.40.1280.10 6 235 1.9E-30 T 23-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDG62_01515 ef7e1db445e39eec130828df0599639f 931 Gene3D G3DSA:3.40.50.300 104 258 1.5E-6 T 23-10-2018 CDG62_01515 ef7e1db445e39eec130828df0599639f 931 Gene3D G3DSA:3.40.50.300 361 595 3.6E-8 T 23-10-2018 CDG62_01515 ef7e1db445e39eec130828df0599639f 931 SUPERFAMILY SSF52540 133 584 1.8E-16 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_18520 c828c3acbdce2144852c25d0e93c000b 132 Pfam PF03899 ATP synthase I chain 16 112 2.3E-21 T 23-10-2018 IPR005598 ATP synthase protein I CDG62_12000 108eda81eff0f0be786734f72615af07 113 Gene3D G3DSA:1.20.120.20 20 113 1.9E-5 T 23-10-2018 CDG62_01760 e923ffb4b49f09d7f3201b4b54feae05 170 SUPERFAMILY SSF53597 8 170 9.06E-51 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDG62_01760 e923ffb4b49f09d7f3201b4b54feae05 170 Pfam PF00186 Dihydrofolate reductase 8 170 9.6E-55 T 23-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CDG62_01760 e923ffb4b49f09d7f3201b4b54feae05 170 PIRSF PIRSF000194 2 170 1.1E-52 T 23-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 CDG62_01760 e923ffb4b49f09d7f3201b4b54feae05 170 Gene3D G3DSA:3.40.430.10 7 170 1.8E-51 T 23-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 CDG62_01760 e923ffb4b49f09d7f3201b4b54feae05 170 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 19 41 - T 23-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 CDG62_01760 e923ffb4b49f09d7f3201b4b54feae05 170 PRINTS PR00070 Dihydrofolate reductase signature 33 41 7.4E-15 T 23-10-2018 CDG62_01760 e923ffb4b49f09d7f3201b4b54feae05 170 PRINTS PR00070 Dihydrofolate reductase signature 19 29 7.4E-15 T 23-10-2018 CDG62_01760 e923ffb4b49f09d7f3201b4b54feae05 170 PRINTS PR00070 Dihydrofolate reductase signature 46 57 7.4E-15 T 23-10-2018 CDG62_01760 e923ffb4b49f09d7f3201b4b54feae05 170 PRINTS PR00070 Dihydrofolate reductase signature 104 118 7.4E-15 T 23-10-2018 CDG62_12010 8061b1152bdcd6ea9666f781c717cee8 258 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 4 256 4.4E-77 T 23-10-2018 IPR023875 DNA metabolism protein, putative CDG62_12010 8061b1152bdcd6ea9666f781c717cee8 258 Pfam PF13566 Domain of unknown function (DUF4130 82 255 2.6E-47 T 23-10-2018 IPR025404 Domain of unknown function DUF4130 CDG62_10400 7e16b8dfa432cd09e9e34418dc481222 151 Gene3D G3DSA:2.40.128.640 35 150 2.1E-10 T 23-10-2018 CDG62_10400 7e16b8dfa432cd09e9e34418dc481222 151 Pfam PF04170 NlpE N-terminal domain 47 125 4.3E-7 T 23-10-2018 IPR007298 Copper resistance lipoprotein NlpE CDG62_07475 b3e1b4a91cb2ca5beacc35a4afbbbdb7 362 Pfam PF12698 ABC-2 family transporter protein 21 356 3.0E-31 T 23-10-2018 CDG62_19060 862d2bbeb50338e66a68b86898df47f7 378 Gene3D G3DSA:1.50.10.150 13 366 6.7E-24 T 23-10-2018 IPR038665 Voltage-dependent anion channel superfamily CDG62_19060 862d2bbeb50338e66a68b86898df47f7 378 Pfam PF03595 Voltage-dependent anion channel 17 354 4.0E-79 T 23-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 CDG62_12970 3aa29a0ebeba7b38af21613dced04b58 199 Pfam PF01810 LysE type translocator 14 198 2.4E-35 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_10980 8a84edbb65bbd2bc99d1c5e9c22e6a26 241 SUPERFAMILY SSF52540 2 206 2.28E-6 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_17860 c53a9ae954dc1918b3a8df5a11e3ec89 229 Pfam PF01323 DSBA-like thioredoxin domain 2 203 4.9E-44 T 23-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 CDG62_17860 c53a9ae954dc1918b3a8df5a11e3ec89 229 Gene3D G3DSA:3.40.30.10 1 207 3.4E-70 T 23-10-2018 CDG62_17860 c53a9ae954dc1918b3a8df5a11e3ec89 229 SUPERFAMILY SSF52833 1 206 6.49E-41 T 23-10-2018 IPR036249 Thioredoxin-like superfamily CDG62_09505 4c0333dafa39de68d4d6c26e29de2ca8 110 Pfam PF14213 STAS-like domain of unknown function (DUF4325) 28 91 1.7E-15 T 23-10-2018 IPR025474 Domain of unknown function DUF4325 CDG62_16090 f08370e6c52e56d14df77045f56ebf18 458 Gene3D G3DSA:3.40.50.1460 283 437 8.2E-9 T 23-10-2018 CDG62_16090 f08370e6c52e56d14df77045f56ebf18 458 SUPERFAMILY SSF52129 282 427 8.02E-7 T 23-10-2018 IPR029030 Caspase-like domain superfamily CDG62_16090 f08370e6c52e56d14df77045f56ebf18 458 Pfam PF01650 Peptidase C13 family 229 436 1.5E-40 T 23-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 CDG62_15385 dbd3a9f5ab6dda0c9c9efdefb2dc5266 295 Pfam PF01039 Carboxyl transferase domain 13 196 1.2E-18 T 23-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 CDG62_15385 dbd3a9f5ab6dda0c9c9efdefb2dc5266 295 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 8 274 7.6E-113 T 23-10-2018 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 CDG62_15385 dbd3a9f5ab6dda0c9c9efdefb2dc5266 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 177 188 1.9E-5 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_15385 dbd3a9f5ab6dda0c9c9efdefb2dc5266 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 75 89 1.9E-5 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_15385 dbd3a9f5ab6dda0c9c9efdefb2dc5266 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 110 128 1.9E-5 T 23-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 CDG62_15385 dbd3a9f5ab6dda0c9c9efdefb2dc5266 295 Gene3D G3DSA:3.90.226.10 5 231 1.1E-44 T 23-10-2018 CDG62_15385 dbd3a9f5ab6dda0c9c9efdefb2dc5266 295 SUPERFAMILY SSF52096 4 228 1.99E-39 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_09465 56aa938f0e4dce524c1305e141ab83e4 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 6 50 2.0E-5 T 23-10-2018 IPR010260 DNA-binding transcriptional activator AlpA CDG62_06670 c567f9b08b1c5162cea0a2dd16be96b4 184 Gene3D G3DSA:3.40.50.360 1 184 3.8E-54 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_06670 c567f9b08b1c5162cea0a2dd16be96b4 184 Pfam PF12724 Flavodoxin domain 6 75 2.3E-9 T 23-10-2018 IPR026816 Flavodoxin domain CDG62_06670 c567f9b08b1c5162cea0a2dd16be96b4 184 SUPERFAMILY SSF52218 1 183 2.1E-41 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_17635 f1ca601cbd728899f27f135d04f437b3 91 PIRSF PIRSF028784 1 91 1.5E-27 T 23-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 CDG62_17635 f1ca601cbd728899f27f135d04f437b3 91 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 84 2.1E-17 T 23-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 CDG62_16835 14218ec20dbfacbc5633809e69cacad7 238 Pfam PF11008 Protein of unknown function (DUF2846) 55 162 5.1E-24 T 23-10-2018 IPR022548 Domain of unknown function DUF2846 CDG62_00645 926b9e6870c28c64535f36949a133d45 94 ProDom PD029395 PLASMID MOBILIZATION C MOBILITY CONJUGATION MOBC MOBS ORF94 PROBABLE ORF110 50 90 5.0E-4 T 23-10-2018 CDG62_14025 3fc958d4b2314c6b53a5986108587d5c 228 Gene3D G3DSA:3.40.50.150 51 203 1.1E-21 T 23-10-2018 CDG62_14025 3fc958d4b2314c6b53a5986108587d5c 228 SUPERFAMILY SSF53335 63 216 1.04E-21 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_14025 3fc958d4b2314c6b53a5986108587d5c 228 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 87 155 8.4E-15 T 23-10-2018 CDG62_06845 fd7193d49dad751e23181c6b8e07ecce 188 ProSitePatterns PS00201 Flavodoxin signature. 16 32 - T 23-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CDG62_06845 fd7193d49dad751e23181c6b8e07ecce 188 Pfam PF03358 NADPH-dependent FMN reductase 23 127 5.6E-12 T 23-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CDG62_06845 fd7193d49dad751e23181c6b8e07ecce 188 SUPERFAMILY SSF52218 13 184 3.8E-48 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_06845 fd7193d49dad751e23181c6b8e07ecce 188 Gene3D G3DSA:3.40.50.360 10 188 1.9E-52 T 23-10-2018 IPR029039 Flavoprotein-like superfamily CDG62_02315 8446dad319a4421d7f4454cd69247d1e 311 Pfam PF07751 Abi-like protein 35 235 8.2E-45 T 23-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like CDG62_08140 90dff3b3b47c3c8420e8eac57224d93a 224 Gene3D G3DSA:3.40.50.150 5 224 4.6E-39 T 23-10-2018 CDG62_08140 90dff3b3b47c3c8420e8eac57224d93a 224 Pfam PF13649 Methyltransferase domain 46 142 5.3E-15 T 23-10-2018 CDG62_08140 90dff3b3b47c3c8420e8eac57224d93a 224 SUPERFAMILY SSF53335 10 223 2.68E-31 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_07270 2a9811a33015f0076304dafe21fb65dd 228 SMART SM00463 137 218 1.5E-8 T 23-10-2018 IPR002625 Smr domain CDG62_07270 2a9811a33015f0076304dafe21fb65dd 228 SUPERFAMILY SSF160443 142 218 1.12E-13 T 23-10-2018 IPR036063 Smr domain superfamily CDG62_07270 2a9811a33015f0076304dafe21fb65dd 228 Pfam PF01713 Smr domain 142 218 2.9E-20 T 23-10-2018 IPR002625 Smr domain CDG62_07270 2a9811a33015f0076304dafe21fb65dd 228 Gene3D G3DSA:3.30.1370.110 94 223 1.9E-32 T 23-10-2018 CDG62_16170 a3a08f0c1c385b50282c879bf13308b0 114 SUPERFAMILY SSF54427 8 109 5.48E-5 T 23-10-2018 IPR032710 NTF2-like domain superfamily CDG62_16170 a3a08f0c1c385b50282c879bf13308b0 114 Gene3D G3DSA:3.10.450.50 1 111 1.6E-18 T 23-10-2018 CDG62_09880 13e9865538e58063adbbca43b795538c 127 Pfam PF06127 Protein of unknown function (DUF962) 22 114 3.6E-29 T 23-10-2018 IPR009305 Protein of unknown function DUF962 CDG62_13855 b3bd03e09b3e5305c3f6e6b17fd9b9cf 132 SUPERFAMILY SSF46955 2 123 1.17E-28 T 23-10-2018 IPR009061 Putative DNA-binding domain superfamily CDG62_13855 b3bd03e09b3e5305c3f6e6b17fd9b9cf 132 SMART SM00422 2 70 3.0E-23 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_13855 b3bd03e09b3e5305c3f6e6b17fd9b9cf 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.8E-13 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_13855 b3bd03e09b3e5305c3f6e6b17fd9b9cf 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.8E-13 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_13855 b3bd03e09b3e5305c3f6e6b17fd9b9cf 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.8E-13 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_13855 b3bd03e09b3e5305c3f6e6b17fd9b9cf 132 Gene3D G3DSA:1.10.1660.10 1 122 1.6E-32 T 23-10-2018 CDG62_13855 b3bd03e09b3e5305c3f6e6b17fd9b9cf 132 Pfam PF13411 MerR HTH family regulatory protein 3 68 1.0E-18 T 23-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CDG62_11675 7c2e9eaf17d1aa6ae6440d50e1fbd1b5 138 Pfam PF03788 LrgA family 21 113 4.2E-25 T 23-10-2018 IPR005538 LrgA/CidA family GO:0016021 CDG62_12075 2274972439d84a5072d34b7027278c3c 98 Pfam PF05135 Phage gp6-like head-tail connector protein 4 91 5.6E-11 T 23-10-2018 IPR021146 Phage gp6-like head-tail connector protein CDG62_12075 2274972439d84a5072d34b7027278c3c 98 Gene3D G3DSA:1.10.3230.30 1 93 2.9E-5 T 23-10-2018 CDG62_15830 2f33f2df69310f0dd745803ca04d5898 151 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 123 1.5E-30 T 23-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CDG62_15830 2f33f2df69310f0dd745803ca04d5898 151 Pfam PF01814 Hemerythrin HHE cation binding domain 12 124 5.7E-9 T 23-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CDG62_15830 2f33f2df69310f0dd745803ca04d5898 151 SUPERFAMILY SSF47188 1 124 3.66E-28 T 23-10-2018 IPR035938 Hemerythrin-like superfamily CDG62_15830 2f33f2df69310f0dd745803ca04d5898 151 Gene3D G3DSA:1.20.120.50 1 127 1.7E-31 T 23-10-2018 IPR035938 Hemerythrin-like superfamily CDG62_00630 08a67cda673fafc7cbacaa21b0a485bd 97 Gene3D G3DSA:1.10.1220.10 1 50 1.3E-13 T 23-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CDG62_00630 08a67cda673fafc7cbacaa21b0a485bd 97 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 90 1.4E-15 T 23-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CDG62_00630 08a67cda673fafc7cbacaa21b0a485bd 97 Pfam PF04221 RelB antitoxin 7 75 2.4E-14 T 23-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CDG62_10015 573c7b599e44b84c7018e5ca0625e813 391 Gene3D G3DSA:3.30.450.40 22 205 1.7E-36 T 23-10-2018 IPR029016 GAF-like domain superfamily CDG62_10015 573c7b599e44b84c7018e5ca0625e813 391 SUPERFAMILY SSF46894 221 283 3.97E-5 T 23-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CDG62_08100 0fdec284c744f171c3a2951b15e38120 300 Gene3D G3DSA:3.20.20.70 1 298 8.3E-125 T 23-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CDG62_08100 0fdec284c744f171c3a2951b15e38120 300 SUPERFAMILY SSF51569 2 291 1.15E-67 T 23-10-2018 CDG62_08100 0fdec284c744f171c3a2951b15e38120 300 Pfam PF00682 HMGL-like 5 276 8.4E-52 T 23-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CDG62_08155 9e7d3506dc224dc58501bc29f6f9b26c 261 Pfam PF00487 Fatty acid desaturase 44 252 1.2E-19 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CDG62_02585 064851cabc42ddcfe26a0176c654408b 234 Pfam PF13610 DDE domain 74 212 8.8E-50 T 23-10-2018 IPR032874 DDE domain CDG62_02585 064851cabc42ddcfe26a0176c654408b 234 Gene3D G3DSA:3.30.420.10 67 210 2.0E-5 T 23-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 CDG62_02585 064851cabc42ddcfe26a0176c654408b 234 SUPERFAMILY SSF53098 72 191 8.85E-9 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_05440 04f76a3baf576746ac7ee942cfa74768 254 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 5 182 6.3E-25 T 23-10-2018 IPR002654 Glycosyl transferase, family 25 CDG62_17220 7fb50adf951d53eff49ce3e619c2542b 378 Pfam PF04087 Domain of unknown function (DUF389) 88 223 5.2E-30 T 23-10-2018 IPR005240 Protein of unknown function DUF389 CDG62_18455 05f7b650480c73e5f3d0681c8001305b 129 Pfam PF11776 Nickel/cobalt transporter regulator 75 124 5.2E-13 T 23-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CDG62_18455 05f7b650480c73e5f3d0681c8001305b 129 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 72 126 4.0E-10 T 23-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CDG62_18455 05f7b650480c73e5f3d0681c8001305b 129 Gene3D G3DSA:3.10.450.160 53 129 9.4E-14 T 23-10-2018 CDG62_16805 5a85a079fb35bed533d8c3ebaf9df5f9 167 Gene3D G3DSA:1.20.120.450 2 164 6.6E-36 T 23-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CDG62_16805 5a85a079fb35bed533d8c3ebaf9df5f9 167 SUPERFAMILY SSF109854 6 157 1.27E-29 T 23-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CDG62_16805 5a85a079fb35bed533d8c3ebaf9df5f9 167 Pfam PF05163 DinB family 4 159 3.3E-25 T 23-10-2018 IPR007837 DNA damage-inducible protein DinB CDG62_15030 3d41070e5378c2d287b8fb192994d431 659 Gene3D G3DSA:2.120.10.30 333 659 7.9E-116 T 23-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDG62_15030 3d41070e5378c2d287b8fb192994d431 659 SUPERFAMILY SSF50956 80 329 4.05E-24 T 23-10-2018 CDG62_15030 3d41070e5378c2d287b8fb192994d431 659 Pfam PF02333 Phytase 332 656 2.4E-72 T 23-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 CDG62_15030 3d41070e5378c2d287b8fb192994d431 659 Pfam PF02333 Phytase 159 245 3.3E-5 T 23-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 CDG62_15030 3d41070e5378c2d287b8fb192994d431 659 Gene3D G3DSA:2.120.10.30 45 270 3.3E-17 T 23-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDG62_15030 3d41070e5378c2d287b8fb192994d431 659 SUPERFAMILY SSF50956 339 658 8.5E-83 T 23-10-2018 CDG62_03685 f0d7f0dff586dd8d045a8dd37194a9c1 136 Pfam PF13781 DoxX-like family 15 114 5.1E-18 T 23-10-2018 IPR025695 DoxX-like family CDG62_12475 323b6abaa06d647be6cb0df5a7e913c3 278 SUPERFAMILY SSF56112 12 263 3.93E-33 T 23-10-2018 IPR011009 Protein kinase-like domain superfamily CDG62_12475 323b6abaa06d647be6cb0df5a7e913c3 278 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 10 256 3.1E-109 T 23-10-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 CDG62_11365 8f352bc3b42a159eb8e09082c35534cd 412 SUPERFAMILY SSF50182 186 252 2.58E-11 T 23-10-2018 IPR010920 LSM domain superfamily CDG62_11365 8f352bc3b42a159eb8e09082c35534cd 412 Pfam PF00924 Mechanosensitive ion channel 144 396 8.2E-49 T 23-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CDG62_04235 72c7b0ee8f9cc997fa064b89b5d4a836 357 Gene3D G3DSA:3.10.310.50 84 224 6.8E-45 T 23-10-2018 CDG62_04235 72c7b0ee8f9cc997fa064b89b5d4a836 357 Pfam PF04536 TPM domain 95 218 1.0E-36 T 23-10-2018 IPR007621 TPM domain CDG62_05730 907dedd400bff7170e689cc8696c2f62 166 Pfam PF13689 Domain of unknown function (DUF4154) 32 162 1.9E-23 T 23-10-2018 IPR025293 YfiR-like CDG62_13940 fa74d1cbd23c4180c564d5fe4016ee4f 242 Pfam PF01925 Sulfite exporter TauE/SafE 7 233 3.9E-26 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDG62_17045 849cc5cd0ec5c1fdfbdc9d8b5fdbf9b7 190 Pfam PF03729 Short repeat of unknown function (DUF308) 79 147 3.0E-11 T 23-10-2018 IPR005325 Protein of unknown function DUF308, membrane CDG62_17045 849cc5cd0ec5c1fdfbdc9d8b5fdbf9b7 190 Pfam PF03729 Short repeat of unknown function (DUF308) 135 178 0.0012 T 23-10-2018 IPR005325 Protein of unknown function DUF308, membrane CDG62_17045 849cc5cd0ec5c1fdfbdc9d8b5fdbf9b7 190 Pfam PF03729 Short repeat of unknown function (DUF308) 23 91 8.2E-12 T 23-10-2018 IPR005325 Protein of unknown function DUF308, membrane CDG62_17415 c02065d913347cbdffce46552561be9f 214 SUPERFAMILY SSF56281 3 209 1.57E-55 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_17415 c02065d913347cbdffce46552561be9f 214 SMART SM00849 13 193 5.2E-41 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_17415 c02065d913347cbdffce46552561be9f 214 Gene3D G3DSA:3.60.15.10 2 210 1.1E-73 T 23-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CDG62_17415 c02065d913347cbdffce46552561be9f 214 Pfam PF00753 Metallo-beta-lactamase superfamily 10 193 1.1E-30 T 23-10-2018 IPR001279 Metallo-beta-lactamase CDG62_15635 7582f1088b85106a79c79e777a9050ab 84 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 8 79 1.1E-36 T 23-10-2018 IPR019882 Conserved hypothetical protein CHP03643 CDG62_15635 7582f1088b85106a79c79e777a9050ab 84 Pfam PF10985 Protein of unknown function (DUF2805) 10 80 2.8E-36 T 23-10-2018 IPR019882 Conserved hypothetical protein CHP03643 CDG62_10155 7986d31c14933969fcf439ea809c48a0 327 SUPERFAMILY SSF52540 10 213 2.18E-36 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_10155 7986d31c14933969fcf439ea809c48a0 327 Gene3D G3DSA:3.40.50.300 7 172 1.1E-43 T 23-10-2018 CDG62_10155 7986d31c14933969fcf439ea809c48a0 327 Pfam PF13177 DNA polymerase III, delta subunit 27 173 3.7E-35 T 23-10-2018 CDG62_03845 4338ac8f239a4a744e65e6a056d22cda 276 Pfam PF13489 Methyltransferase domain 46 215 4.2E-10 T 23-10-2018 CDG62_03845 4338ac8f239a4a744e65e6a056d22cda 276 Gene3D G3DSA:3.40.50.150 32 275 6.4E-26 T 23-10-2018 CDG62_03845 4338ac8f239a4a744e65e6a056d22cda 276 SUPERFAMILY SSF53335 33 274 2.11E-27 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_15370 d526d678c1c513467774968b58886e15 292 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 24 281 3.0E-75 T 23-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CDG62_15370 d526d678c1c513467774968b58886e15 292 Gene3D G3DSA:1.10.4200.10 170 286 1.0E-9 T 23-10-2018 CDG62_15370 d526d678c1c513467774968b58886e15 292 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 19 285 2.6E-90 T 23-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CDG62_15370 d526d678c1c513467774968b58886e15 292 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 19 292 109.62 T 23-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CDG62_12885 46a2d7f94209cd672de529dc06be7dc2 199 Hamap MF_00165 Thymidylate kinase [tmk]. 1 198 27.634 T 23-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CDG62_12885 46a2d7f94209cd672de529dc06be7dc2 199 SUPERFAMILY SSF52540 1 197 4.42E-54 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12885 46a2d7f94209cd672de529dc06be7dc2 199 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 191 3.3E-56 T 23-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CDG62_12885 46a2d7f94209cd672de529dc06be7dc2 199 Gene3D G3DSA:3.40.50.300 1 199 1.5E-65 T 23-10-2018 CDG62_12885 46a2d7f94209cd672de529dc06be7dc2 199 Pfam PF02223 Thymidylate kinase 5 192 2.6E-53 T 23-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CDG62_18260 e56423c9a59fa0372c10aee7d130db6c 75 Pfam PF04380 Membrane fusogenic activity 4 68 3.3E-13 T 23-10-2018 IPR007475 Membrane fusogenic activity CDG62_16665 2f25aff0af68ee469050e481b33964a7 316 Pfam PF11726 Inovirus Gp2 129 303 1.2E-16 T 23-10-2018 CDG62_05335 08786a305825a295cfedda2e0bfb2e97 232 PIRSF PIRSF006170 1 216 2.0E-64 T 23-10-2018 IPR026039 Uncharacterised protein family UPF0070 CDG62_05335 08786a305825a295cfedda2e0bfb2e97 232 SUPERFAMILY SSF48452 91 192 2.42E-7 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_05335 08786a305825a295cfedda2e0bfb2e97 232 Pfam PF09976 Tetratricopeptide repeat-like domain 14 211 4.8E-41 T 23-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 CDG62_05335 08786a305825a295cfedda2e0bfb2e97 232 Gene3D G3DSA:1.25.40.10 39 224 7.8E-9 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_04440 fb97d055f872684ef3ac4ef58363227b 214 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 180 2.3E-17 T 23-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDG62_04440 fb97d055f872684ef3ac4ef58363227b 214 PIRSF PIRSF009320 1 203 2.7E-30 T 23-10-2018 CDG62_04440 fb97d055f872684ef3ac4ef58363227b 214 SUPERFAMILY SSF52540 1 194 1.06E-32 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_04440 fb97d055f872684ef3ac4ef58363227b 214 Gene3D G3DSA:3.40.50.300 1 208 3.8E-42 T 23-10-2018 CDG62_11755 8d40acbd07f8473a0941a4bbc413ba8a 519 Pfam PF03929 PepSY-associated TM region 10 358 2.5E-59 T 23-10-2018 IPR005625 PepSY-associated TM protein CDG62_04355 56796fab0f2031f3014ef9c5d70a3c3c 317 Gene3D G3DSA:3.40.50.1820 30 317 1.3E-74 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_04355 56796fab0f2031f3014ef9c5d70a3c3c 317 Pfam PF00561 alpha/beta hydrolase fold 38 140 1.2E-9 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_04355 56796fab0f2031f3014ef9c5d70a3c3c 317 SUPERFAMILY SSF53474 34 311 1.3E-35 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_04880 e9ce009fa44210c2176648a7ab67e217 675 SUPERFAMILY SSF55486 9 671 4.32E-178 T 23-10-2018 CDG62_04880 e9ce009fa44210c2176648a7ab67e217 675 Gene3D G3DSA:1.10.1370.10 140 604 5.2E-239 T 23-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CDG62_04880 e9ce009fa44210c2176648a7ab67e217 675 Pfam PF01432 Peptidase family M3 221 670 1.2E-142 T 23-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CDG62_04880 e9ce009fa44210c2176648a7ab67e217 675 Gene3D G3DSA:1.10.1370.40 12 669 5.2E-239 T 23-10-2018 CDG62_11990 38fa04632954fb50570b9de6a147b098 72 Gene3D G3DSA:2.30.30.320 1 72 4.0E-28 T 23-10-2018 IPR037135 DUF1653-like domain superfamily CDG62_11990 38fa04632954fb50570b9de6a147b098 72 Pfam PF07866 Protein of unknown function (DUF1653) 6 67 8.0E-28 T 23-10-2018 IPR023387 DUF1653-like domain CDG62_06010 728b83ed76b5ab3380da0e62cee06caa 426 Gene3D G3DSA:2.40.160.180 27 426 1.5E-106 T 23-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily CDG62_06010 728b83ed76b5ab3380da0e62cee06caa 426 Pfam PF04966 Carbohydrate-selective porin, OprB family 74 424 5.5E-75 T 23-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 CDG62_16975 275404c3af56f396b621be61626d1e9d 207 Pfam PF01618 MotA/TolQ/ExbB proton channel family 58 172 7.7E-33 T 23-10-2018 IPR002898 MotA/TolQ/ExbB proton channel CDG62_08165 176cad99b9c28473304f73926e79a1d9 819 Gene3D G3DSA:3.60.10.10 463 778 2.9E-38 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDG62_08165 176cad99b9c28473304f73926e79a1d9 819 SUPERFAMILY SSF56219 462 779 7.05E-32 T 23-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CDG62_08165 176cad99b9c28473304f73926e79a1d9 819 Pfam PF00932 Lamin Tail Domain 23 128 1.9E-10 T 23-10-2018 IPR001322 Lamin tail domain CDG62_12145 d673ee3034d12240709d9c18a9847dd2 376 PRINTS PR00164 ABC-2 type transport system membrane protein signature 318 337 1.0E-5 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDG62_12145 d673ee3034d12240709d9c18a9847dd2 376 PRINTS PR00164 ABC-2 type transport system membrane protein signature 260 284 1.0E-5 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDG62_12145 d673ee3034d12240709d9c18a9847dd2 376 PRINTS PR00164 ABC-2 type transport system membrane protein signature 298 317 1.0E-5 T 23-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 CDG62_12145 d673ee3034d12240709d9c18a9847dd2 376 Pfam PF12698 ABC-2 family transporter protein 26 368 4.8E-46 T 23-10-2018 CDG62_17115 ddbf6cfc817b1dff97692ec2e04f699a 430 Gene3D G3DSA:1.20.58.2200 367 429 3.7E-6 T 23-10-2018 IPR038440 FimV, C-terminal domain superfamily CDG62_14355 a2502659d441d538b687e16599c61bf4 433 SUPERFAMILY SSF56935 87 433 1.81E-26 T 23-10-2018 CDG62_06110 20bc02c7f169cdc01cad4a0b7e9634f5 318 Pfam PF13250 Domain of unknown function (DUF4041) 234 286 5.0E-6 T 23-10-2018 IPR025280 Domain of unknown function DUF4041 CDG62_05830 3029c179219f5dea104b6fa00530fbf4 282 Gene3D G3DSA:3.60.21.10 9 281 2.6E-66 T 23-10-2018 IPR029052 Metallo-dependent phosphatase-like CDG62_05830 3029c179219f5dea104b6fa00530fbf4 282 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 9 276 7.4E-82 T 23-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CDG62_05830 3029c179219f5dea104b6fa00530fbf4 282 Pfam PF00149 Calcineurin-like phosphoesterase 11 137 9.9E-14 T 23-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CDG62_05830 3029c179219f5dea104b6fa00530fbf4 282 PIRSF PIRSF000903 7 282 4.9E-94 T 23-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CDG62_05830 3029c179219f5dea104b6fa00530fbf4 282 SUPERFAMILY SSF56300 10 270 1.9E-48 T 23-10-2018 CDG62_08145 67a065ec73d331a49c14d16d8730e9cf 265 SUPERFAMILY SSF54637 173 260 3.04E-5 T 23-10-2018 IPR029069 HotDog domain superfamily CDG62_08145 67a065ec73d331a49c14d16d8730e9cf 265 Gene3D G3DSA:3.10.129.90 39 262 2.6E-10 T 23-10-2018 CDG62_08145 67a065ec73d331a49c14d16d8730e9cf 265 Pfam PF13622 Thioesterase-like superfamily 30 260 6.0E-26 T 23-10-2018 CDG62_09250 8f8a64ad0a86199ab69a565b65305fc7 381 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 381 2.5E-150 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CDG62_09250 8f8a64ad0a86199ab69a565b65305fc7 381 PIRSF PIRSF000267 2 380 1.4E-117 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CDG62_09250 8f8a64ad0a86199ab69a565b65305fc7 381 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 364 1.9E-103 T 23-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CDG62_02325 9e5c638df8db41171d0217c4ea5db7d1 248 Pfam PF01863 Protein of unknown function DUF45 31 239 2.7E-57 T 23-10-2018 IPR002725 Protein of unknown function DUF45 CDG62_02325 9e5c638df8db41171d0217c4ea5db7d1 248 Gene3D G3DSA:3.30.2010.10 147 243 1.4E-16 T 23-10-2018 CDG62_02670 554f5b976e55960465c1ccce6c24dba8 234 Pfam PF13610 DDE domain 74 212 3.0E-48 T 23-10-2018 IPR032874 DDE domain CDG62_02670 554f5b976e55960465c1ccce6c24dba8 234 SUPERFAMILY SSF53098 71 191 3.3E-7 T 23-10-2018 IPR012337 Ribonuclease H-like superfamily CDG62_11515 70f01e936a80730a5228ba2fe1f14826 169 Pfam PF01292 Prokaryotic cytochrome b561 8 166 1.1E-18 T 23-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CDG62_11515 70f01e936a80730a5228ba2fe1f14826 169 SUPERFAMILY SSF81342 5 167 1.1E-19 T 23-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CDG62_19210 4c1d881b2dffb2640b1ad944949bae05 83 Pfam PF04226 Transglycosylase associated protein 34 81 2.7E-13 T 23-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 CDG62_09240 22c6756440df6898702440285bdced97 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 22 96 7.9E-23 T 23-10-2018 IPR011846 Cyd operon protein YbgE CDG62_07530 f55099e0e88aa7efe9265c6f32042de0 164 Pfam PF11948 Protein of unknown function (DUF3465) 56 164 2.3E-52 T 23-10-2018 IPR021856 Protein of unknown function DUF3465 CDG62_00780 06bd5cc9b61f6dfe74390ab60828922e 361 Pfam PF14487 Domain of unknown function (DUF4433) 167 341 2.9E-23 T 23-10-2018 IPR029494 Domain of unknown function DUF4433 CDG62_10350 9f2c96d4e1f7082d9074344c02a0394a 391 TIGRFAM TIGR00843 benE: benzoate transporter 10 383 9.8E-104 T 23-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CDG62_10350 9f2c96d4e1f7082d9074344c02a0394a 391 Pfam PF03594 Benzoate membrane transport protein 6 382 1.7E-123 T 23-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CDG62_06345 36b482b034d163f941b57782e2050fd6 264 Pfam PF02616 Segregation and condensation protein ScpA 53 153 1.7E-13 T 23-10-2018 IPR003768 Segregation and condensation protein A CDG62_16395 ab3172c1c8e0949fa99f947fd01622ff 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 36 134 6.0E-4 T 23-10-2018 IPR020143 Uncharacterised protein family, RP436 CDG62_16395 ab3172c1c8e0949fa99f947fd01622ff 142 Pfam PF09335 SNARE associated Golgi protein 22 135 8.4E-14 T 23-10-2018 IPR032816 SNARE associated Golgi protein CDG62_06040 acafc16706e58941ccda24d682d44bf5 396 SUPERFAMILY SSF50952 37 390 3.27E-16 T 23-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CDG62_06040 acafc16706e58941ccda24d682d44bf5 396 Gene3D G3DSA:2.120.10.30 46 393 7.7E-14 T 23-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like CDG62_08945 cbd53041e2d74b50d9282dc7165a9da9 428 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 412 4.5E-139 T 23-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CDG62_08945 cbd53041e2d74b50d9282dc7165a9da9 428 Pfam PF05525 Branched-chain amino acid transport protein 7 426 1.9E-142 T 23-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CDG62_11335 7a2266a2c2223f3ab6f4cda770284b92 267 TIGRFAM TIGR03611 RutD: pyrimidine utilization protein D 1 261 2.3E-90 T 23-10-2018 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 CDG62_11335 7a2266a2c2223f3ab6f4cda770284b92 267 Pfam PF00561 alpha/beta hydrolase fold 16 101 2.9E-9 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_11335 7a2266a2c2223f3ab6f4cda770284b92 267 Gene3D G3DSA:3.40.50.1820 5 262 2.0E-40 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_11335 7a2266a2c2223f3ab6f4cda770284b92 267 SUPERFAMILY SSF53474 13 260 2.07E-30 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_14935 9a33c595ca293b2d4215e70ef188ad06 317 Pfam PF14015 Protein of unknown function (DUF4231) 35 122 3.2E-10 T 23-10-2018 IPR025325 Protein of unknown function DUF4231 CDG62_16540 ec1e51cfc93c244c44cf7db3cde1d34a 107 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 5 99 6.0E-35 T 23-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CDG62_15720 76578b4e86a3b5923f545b2535b03cc8 248 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 3 173 9.9E-17 T 23-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 CDG62_15720 76578b4e86a3b5923f545b2535b03cc8 248 Pfam PF05144 Phage replication protein CRI 3 176 9.9E-23 T 23-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 CDG62_17660 67a95ceb4c79177d894ca7a2cc5eeeb1 174 Gene3D G3DSA:3.30.300.70 2 100 1.2E-17 T 23-10-2018 IPR035956 RimP, N-terminal domain superfamily CDG62_17660 67a95ceb4c79177d894ca7a2cc5eeeb1 174 Pfam PF02576 RimP N-terminal domain 13 103 1.0E-19 T 23-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CDG62_17660 67a95ceb4c79177d894ca7a2cc5eeeb1 174 SUPERFAMILY SSF74942 104 173 4.32E-10 T 23-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CDG62_17660 67a95ceb4c79177d894ca7a2cc5eeeb1 174 SUPERFAMILY SSF75420 3 103 3.79E-19 T 23-10-2018 IPR035956 RimP, N-terminal domain superfamily CDG62_17660 67a95ceb4c79177d894ca7a2cc5eeeb1 174 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 174 21.132 T 23-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 CDG62_17660 67a95ceb4c79177d894ca7a2cc5eeeb1 174 Pfam PF17384 RimP C-terminal SH3 domain 107 172 1.2E-12 T 23-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CDG62_17620 cb93fccca3199bff89f4b10c7cb19d17 121 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 11 107 3.5E-26 T 23-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CDG62_05635 aaa5f0efa3f9b1721f555f041d41b4ab 443 Pfam PF03553 Na+/H+ antiporter family 60 219 1.1E-8 T 23-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CDG62_05635 aaa5f0efa3f9b1721f555f041d41b4ab 443 Pfam PF03553 Na+/H+ antiporter family 243 435 2.4E-7 T 23-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CDG62_08545 08c47310a699698a7abe5c14233294a0 300 Gene3D G3DSA:1.25.40.10 145 293 3.5E-7 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_08545 08c47310a699698a7abe5c14233294a0 300 SUPERFAMILY SSF48452 192 290 3.79E-7 T 23-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 CDG62_06745 697b59d39d821a12726cea2fa1b6292d 204 Pfam PF01810 LysE type translocator 16 197 1.1E-23 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_09245 2d791453290532afb13f8300c9e94c89 33 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 28 2.2E-14 T 23-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 CDG62_09245 2d791453290532afb13f8300c9e94c89 33 Pfam PF08173 Membrane bound YbgT-like protein 1 26 2.0E-12 T 23-10-2018 IPR012994 Membrane bound YbgT-like CDG62_05530 7210f3fa3e52fa7d0562ae52e1ac1172 165 Pfam PF06146 Phosphate-starvation-inducible E 58 126 4.1E-17 T 23-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like CDG62_05530 7210f3fa3e52fa7d0562ae52e1ac1172 165 PIRSF PIRSF029598 1 144 5.6E-36 T 23-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 CDG62_05890 751a2fa83ac38dbcdf302cac84fda806 404 Gene3D G3DSA:3.40.50.150 152 282 6.5E-12 T 23-10-2018 CDG62_05890 751a2fa83ac38dbcdf302cac84fda806 404 Pfam PF13679 Methyltransferase domain 162 296 6.2E-30 T 23-10-2018 IPR025714 Methyltransferase domain CDG62_05890 751a2fa83ac38dbcdf302cac84fda806 404 SUPERFAMILY SSF53335 169 293 1.11E-18 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_02770 93ff6ff3d3354f559819c9085f4f48c6 201 Pfam PF01810 LysE type translocator 14 190 4.6E-17 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_13220 0c151c259cd7712c7425db9f84bda64f 575 Pfam PF03929 PepSY-associated TM region 16 418 1.4E-65 T 23-10-2018 IPR005625 PepSY-associated TM protein CDG62_14905 59e4a49b38c7741bccb1bda8beac6512 163 Pfam PF04093 rod shape-determining protein MreD 18 157 7.6E-14 T 23-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CDG62_14905 59e4a49b38c7741bccb1bda8beac6512 163 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 18 159 4.4E-20 T 23-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CDG62_02405 45ff8a2e692c9208033e3c7595a96d46 602 Pfam PF13240 zinc-ribbon domain 578 599 1.2E-7 T 23-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 CDG62_10250 f8692790016d47b4b2148fe1d3cae2ad 302 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 138 299 1.0E-54 T 23-10-2018 IPR005642 Lysine exporter LysO CDG62_10250 f8692790016d47b4b2148fe1d3cae2ad 302 Pfam PF03956 Lysine exporter LysO 116 299 7.0E-49 T 23-10-2018 IPR005642 Lysine exporter LysO CDG62_01460 0d456ea4bea70dc6a26e027832f7312e 148 Gene3D G3DSA:3.55.50.60 32 148 6.1E-7 T 23-10-2018 IPR038140 DotD superfamily CDG62_01460 0d456ea4bea70dc6a26e027832f7312e 148 Pfam PF16816 DotD protein 39 147 6.0E-9 T 23-10-2018 IPR031817 DotD protein CDG62_12930 5872ed091c97fd7bed3725ba001e38bc 402 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 43 402 3.0E-12 T 23-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CDG62_12930 5872ed091c97fd7bed3725ba001e38bc 402 SUPERFAMILY SSF56935 25 402 1.53E-36 T 23-10-2018 CDG62_12930 5872ed091c97fd7bed3725ba001e38bc 402 Gene3D G3DSA:2.40.160.60 36 402 3.5E-24 T 23-10-2018 CDG62_08050 115009c6f279bf5337732f4cdf964a18 428 Pfam PF06097 Bacterial protein of unknown function (DUF945) 8 424 4.9E-29 T 23-10-2018 IPR010352 Protein of unknown function DUF945 CDG62_02260 63ce4d3027993cc975601925d85d5b19 428 SUPERFAMILY SSF55781 15 159 3.97E-11 T 23-10-2018 CDG62_13840 88ee5f30f534c1271667b6c723f912d6 410 Pfam PF01566 Natural resistance-associated macrophage protein 44 376 1.0E-24 T 23-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 CDG62_13335 04471d1cf939d735790085412dfc8899 351 SUPERFAMILY SSF52096 5 326 8.0E-62 T 23-10-2018 IPR029045 ClpP/crotonase-like domain superfamily CDG62_13335 04471d1cf939d735790085412dfc8899 351 Pfam PF16113 Enoyl-CoA hydratase/isomerase 14 329 2.8E-100 T 23-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 CDG62_13335 04471d1cf939d735790085412dfc8899 351 Gene3D G3DSA:3.90.226.10 2 347 1.4E-99 T 23-10-2018 CDG62_18915 edcbd7f1f3684a170fbd26b0bcc6bbd4 299 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 155 8.0E-9 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_18915 edcbd7f1f3684a170fbd26b0bcc6bbd4 299 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 236 268 1.0E-5 T 23-10-2018 IPR001451 Hexapeptide repeat CDG62_18915 edcbd7f1f3684a170fbd26b0bcc6bbd4 299 Gene3D G3DSA:2.160.10.10 98 285 1.6E-43 T 23-10-2018 CDG62_18915 edcbd7f1f3684a170fbd26b0bcc6bbd4 299 SUPERFAMILY SSF51161 103 293 6.46E-43 T 23-10-2018 IPR011004 Trimeric LpxA-like superfamily CDG62_02605 98b66a2a05bfeb6c5da992b3c8003a44 251 Pfam PF14452 Multiubiquitin 104 169 9.0E-16 T 23-10-2018 IPR027802 Multi-ubiquitin domain CDG62_02605 98b66a2a05bfeb6c5da992b3c8003a44 251 Pfam PF14452 Multiubiquitin 36 99 1.7E-13 T 23-10-2018 IPR027802 Multi-ubiquitin domain CDG62_02605 98b66a2a05bfeb6c5da992b3c8003a44 251 Pfam PF14452 Multiubiquitin 175 248 5.6E-14 T 23-10-2018 IPR027802 Multi-ubiquitin domain CDG62_16365 cdd2c5d126cdbdf86ac1b938de2be765 70 SUPERFAMILY SSF50104 22 47 2.96E-5 T 23-10-2018 IPR008991 Translation protein SH3-like domain superfamily CDG62_16365 cdd2c5d126cdbdf86ac1b938de2be765 70 SMART SM00739 20 47 0.006 T 23-10-2018 IPR005824 KOW CDG62_08255 02095271e06088798431feea2f0ae714 159 Pfam PF04612 Type II secretion system (T2SS), protein M 19 156 1.1E-14 T 23-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 CDG62_02200 b851af4532c02789f704b6af3b37c6a8 95 Gene3D G3DSA:2.30.110.10 1 89 2.5E-8 T 23-10-2018 IPR012349 FMN-binding split barrel GO:0048037 CDG62_10485 a7f653bac17308902fac08b9c6c8c54a 285 SUPERFAMILY SSF103481 41 135 1.19E-8 T 23-10-2018 CDG62_10485 a7f653bac17308902fac08b9c6c8c54a 285 Pfam PF00892 EamA-like transporter family 3 132 1.5E-11 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_03735 b77c19a498fb80ef2e03eaf4965c3864 295 Pfam PF16956 Putative general bacterial porin 1 293 3.9E-20 T 23-10-2018 IPR031593 Putative general bacterial porin CDG62_03735 b77c19a498fb80ef2e03eaf4965c3864 295 SUPERFAMILY SSF56935 163 295 4.49E-6 T 23-10-2018 CDG62_04360 e17101aefd8db5e5f81ef10b76af1d88 344 Hamap MF_00790 Lipase chaperone [lifO]. 3 332 20.208 T 23-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 CDG62_04360 e17101aefd8db5e5f81ef10b76af1d88 344 Pfam PF03280 Proteobacterial lipase chaperone protein 133 323 8.5E-51 T 23-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 CDG62_04360 e17101aefd8db5e5f81ef10b76af1d88 344 SUPERFAMILY SSF158855 62 335 4.45E-87 T 23-10-2018 CDG62_01340 cd3d5b25990726f4a5c84b2402ffb2ce 226 Pfam PF03713 Domain of unknown function (DUF305) 78 222 9.4E-41 T 23-10-2018 IPR005183 Domain of unknown function DUF305 CDG62_01340 cd3d5b25990726f4a5c84b2402ffb2ce 226 Gene3D G3DSA:1.20.1260.10 69 225 9.6E-44 T 23-10-2018 IPR012347 Ferritin-like CDG62_05245 351565ff14290a1abdbc07c08f53657c 121 Pfam PF13511 Domain of unknown function (DUF4124) 19 96 5.6E-5 T 23-10-2018 IPR025392 Domain of unknown function DUF4124 CDG62_13115 5a0e90c8ca1d5c2a9923afdd263b088d 806 SUPERFAMILY SSF51126 13 437 5.54E-17 T 23-10-2018 IPR011050 Pectin lyase fold/virulence factor CDG62_13115 5a0e90c8ca1d5c2a9923afdd263b088d 806 TIGRFAM TIGR04214 CSLREA_Nterm: CSLREA domain 27 52 3.7E-12 T 23-10-2018 IPR026457 CSLREA domain CDG62_11170 b2babf9cc2452d472fc63dc8f4517b49 425 SUPERFAMILY SSF56935 83 425 1.25E-21 T 23-10-2018 CDG62_17180 6f77ae2fda5c2ca8405b83a3821cfce2 168 Pfam PF10947 Protein of unknown function (DUF2628) 41 120 9.6E-12 T 23-10-2018 IPR024399 Protein of unknown function DUF2628 CDG62_03985 2be9c4fa52abbe84b2e349cdca1cc581 433 Gene3D G3DSA:1.20.1740.10 1 431 1.7E-66 T 23-10-2018 CDG62_03985 2be9c4fa52abbe84b2e349cdca1cc581 433 PIRSF PIRSF006060 1 427 6.2E-63 T 23-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 CDG62_03985 2be9c4fa52abbe84b2e349cdca1cc581 433 Pfam PF00324 Amino acid permease 7 392 1.8E-35 T 23-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 CDG62_08765 85f75d22da7c630bd143a5c60d98f993 142 Pfam PF13488 Glycine zipper 35 72 6.1E-5 T 23-10-2018 IPR039567 Glycine zipper domain CDG62_07445 43da3e696c584d740f0f23e5a46d767a 201 Pfam PF01810 LysE type translocator 14 200 1.3E-31 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_07445 43da3e696c584d740f0f23e5a46d767a 201 PIRSF PIRSF006324 1 201 5.3E-46 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_10430 42cac5b7f3a41b2d377aa37a88684049 370 Pfam PF02698 DUF218 domain 206 353 3.2E-21 T 23-10-2018 IPR003848 Domain of unknown function DUF218 CDG62_16705 5939dcd78d27a8ba120dba23d78b980c 256 Pfam PF00899 ThiF family 24 250 1.2E-36 T 23-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CDG62_16705 5939dcd78d27a8ba120dba23d78b980c 256 Gene3D G3DSA:3.40.50.720 3 256 3.7E-89 T 23-10-2018 CDG62_16705 5939dcd78d27a8ba120dba23d78b980c 256 SUPERFAMILY SSF69572 8 249 2.09E-59 T 23-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 CDG62_09235 ed60e0fb490805c8a1bc20f74292a924 204 Pfam PF01914 MarC family integral membrane protein 3 200 2.0E-17 T 23-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CDG62_06985 1daf159b7177deb7c0a67c1e57bdf6cc 301 Pfam PF04228 Putative neutral zinc metallopeptidase 1 297 9.4E-109 T 23-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CDG62_09185 197676097b1d88ae03d3eb11bca96081 133 Hamap MF_00599 Cell division protein FtsB [ftsB]. 11 101 25.586 T 23-10-2018 IPR023081 Cell division protein FtsB CDG62_09185 197676097b1d88ae03d3eb11bca96081 133 Pfam PF04977 Septum formation initiator 22 99 1.1E-22 T 23-10-2018 IPR007060 Septum formation initiator FtsL/DivIC CDG62_08265 cf39d8e2a00d69f469d3fdc6ee240f95 194 Pfam PF02674 Colicin V production protein 4 141 3.3E-28 T 23-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CDG62_04050 6b4da03b828e80610bf42287e753e8c5 139 Gene3D G3DSA:3.40.630.30 3 139 3.1E-37 T 23-10-2018 CDG62_04050 6b4da03b828e80610bf42287e753e8c5 139 Pfam PF00583 Acetyltransferase (GNAT) family 25 124 9.1E-17 T 23-10-2018 IPR000182 GNAT domain CDG62_04050 6b4da03b828e80610bf42287e753e8c5 139 SUPERFAMILY SSF55729 1 130 7.9E-30 T 23-10-2018 IPR016181 Acyl-CoA N-acyltransferase CDG62_07250 66fb4a371fe81e0a928ffd8c64e549f6 628 Pfam PF13387 Domain of unknown function (DUF4105) 122 291 1.3E-56 T 23-10-2018 IPR025178 Domain of unknown function DUF4105 CDG62_04445 dd63ed078915a121c25a40355bd7208f 157 Pfam PF10107 Endonuclease related to archaeal Holliday junction resolvase 37 150 4.8E-26 T 23-10-2018 IPR019287 Holliday junction resolvase-related domain CDG62_08085 31af20effa00bd6bf80b1e418e1e4978 469 Pfam PF02667 Short chain fatty acid transporter 8 454 1.0E-90 T 23-10-2018 IPR006160 Short chain fatty acid transporter AtoE CDG62_11360 8492c92959b46506fb2a1f86b0685330 178 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 178 4.0E-51 T 23-10-2018 IPR018636 Protein of unknown function DUF2058 CDG62_11910 5805c5d37144b1db0fdfdc496911cd6c 179 Pfam PF06127 Protein of unknown function (DUF962) 1 147 1.6E-25 T 23-10-2018 IPR009305 Protein of unknown function DUF962 CDG62_04180 609c19c9591c125d94fd714d7d30abb9 218 Pfam PF05137 Fimbrial assembly protein (PilN) 100 166 8.6E-15 T 23-10-2018 IPR007813 Fimbrial assembly PilN CDG62_16585 a5ce649832aa79144f593aeba745b941 469 Pfam PF03235 Protein of unknown function DUF262 25 202 3.4E-29 T 23-10-2018 IPR004919 Domain of unknown function DUF262 CDG62_08025 4173ad4809467b034c3c686c0907b4ec 257 Pfam PF01435 Peptidase family M48 77 244 6.7E-34 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDG62_06270 32d2bf8ecfd8d928e021616b17aed2c9 259 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 14 257 1.5E-61 T 23-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 CDG62_06270 32d2bf8ecfd8d928e021616b17aed2c9 259 Pfam PF13489 Methyltransferase domain 34 184 2.9E-9 T 23-10-2018 CDG62_06270 32d2bf8ecfd8d928e021616b17aed2c9 259 SUPERFAMILY SSF53335 20 188 7.12E-25 T 23-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CDG62_06270 32d2bf8ecfd8d928e021616b17aed2c9 259 Gene3D G3DSA:3.40.50.150 39 258 4.7E-22 T 23-10-2018 CDG62_06270 32d2bf8ecfd8d928e021616b17aed2c9 259 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 6 257 28.5 T 23-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 CDG62_08965 be70d7ce3f7b15baf38f7463aef972b8 146 SUPERFAMILY SSF109604 3 129 3.84E-22 T 23-10-2018 CDG62_08965 be70d7ce3f7b15baf38f7463aef972b8 146 Gene3D G3DSA:1.10.3210.10 1 145 6.5E-23 T 23-10-2018 CDG62_15260 f96a5ee8e38f49346cf25a3bf9224e92 231 Pfam PF12697 Alpha/beta hydrolase family 7 220 5.9E-16 T 23-10-2018 IPR000073 Alpha/beta hydrolase fold-1 CDG62_15260 f96a5ee8e38f49346cf25a3bf9224e92 231 SUPERFAMILY SSF53474 3 224 1.83E-25 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_15260 f96a5ee8e38f49346cf25a3bf9224e92 231 Gene3D G3DSA:3.40.50.1820 1 228 2.6E-36 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_02530 41768d8bf7685e8d2fb4ca35fcfc8096 116 Pfam PF02411 MerT mercuric transport protein 1 116 8.7E-65 T 23-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 CDG62_01595 1ee826f2f76b0765742258153e77962d 267 Pfam PF13708 Domain of unknown function (DUF4942) 73 241 1.0E-19 T 23-10-2018 IPR031339 Domain of unknown function DUF4942 CDG62_08275 6a7b6e051742fead95d1a70ed464229f 615 Pfam PF01435 Peptidase family M48 95 303 4.0E-5 T 23-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CDG62_08275 6a7b6e051742fead95d1a70ed464229f 615 Gene3D G3DSA:3.30.2010.10 81 170 2.4E-12 T 23-10-2018 CDG62_02570 4d853062891fea46fa15511c244b0da1 70 Pfam PF11809 Domain of unknown function (DUF3330) 1 70 6.1E-34 T 23-10-2018 IPR021767 Transposon Tn21 modulator protein CDG62_02880 32086480b446ef818746585842bbc269 111 Pfam PF05717 IS66 Orf2 like protein 6 101 2.7E-30 T 23-10-2018 IPR008878 Transposase IS66, Orf2 CDG62_11555 32086480b446ef818746585842bbc269 111 Pfam PF05717 IS66 Orf2 like protein 6 101 2.7E-30 T 23-10-2018 IPR008878 Transposase IS66, Orf2 CDG62_03990 757edfa85cb6fda68962a46713b1c924 470 SUPERFAMILY SSF51905 61 349 1.36E-40 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_03990 757edfa85cb6fda68962a46713b1c924 470 Gene3D G3DSA:3.30.9.10 157 379 1.2E-63 T 23-10-2018 CDG62_03990 757edfa85cb6fda68962a46713b1c924 470 Pfam PF01266 FAD dependent oxidoreductase 63 418 7.7E-48 T 23-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CDG62_03990 757edfa85cb6fda68962a46713b1c924 470 Gene3D G3DSA:3.50.50.60 63 418 1.2E-63 T 23-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily CDG62_15175 b2415da61f3bef8c4d953acaae591a99 268 Gene3D G3DSA:1.10.238.10 26 149 4.9E-7 T 23-10-2018 CDG62_15175 b2415da61f3bef8c4d953acaae591a99 268 SUPERFAMILY SSF47473 61 218 1.14E-8 T 23-10-2018 IPR011992 EF-hand domain pair CDG62_01365 f3254acecc8f25c30a358356142030ac 164 SUPERFAMILY SSF46966 30 97 1.1E-5 T 23-10-2018 CDG62_18675 00df4f9038235d0432c37c06aec357e3 130 Pfam PF04247 Invasion gene expression up-regulator, SirB 6 127 9.3E-14 T 23-10-2018 IPR007360 Invasion gene expression up-regulator, SirB CDG62_05615 fc1d06d4798156da565eafe8071ca7af 330 Pfam PF10974 Protein of unknown function (DUF2804) 7 329 7.6E-67 T 23-10-2018 IPR021243 Protein of unknown function DUF2804 CDG62_05570 a7ddeb2101418b77aff59f618703a5aa 481 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 3 447 2.1E-116 T 23-10-2018 IPR003846 Uncharacterised protein family UPF0061 CDG62_05145 dc3d26ef610328288625bebf0fad7002 204 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 202 15.796 T 23-10-2018 IPR006008 Intracellular septation protein A GO:0016021 CDG62_05145 dc3d26ef610328288625bebf0fad7002 204 Pfam PF04279 Intracellular septation protein A 1 201 9.7E-46 T 23-10-2018 IPR006008 Intracellular septation protein A GO:0016021 CDG62_01670 952e1b1647852805f692ea8051ed93a8 143 SUPERFAMILY SSF143744 5 137 5.36E-37 T 23-10-2018 IPR038084 GlcG-like domain superfamily CDG62_01670 952e1b1647852805f692ea8051ed93a8 143 Pfam PF03928 Haem-degrading 11 134 1.2E-29 T 23-10-2018 IPR005624 Haem-degrading CDG62_01670 952e1b1647852805f692ea8051ed93a8 143 Gene3D G3DSA:3.30.450.150 1 140 2.7E-41 T 23-10-2018 IPR038084 GlcG-like domain superfamily CDG62_12580 a4d4bddc085aae54670774ef677cac8d 100 Pfam PF04328 Selenoprotein, putative 36 100 6.3E-22 T 23-10-2018 IPR007423 Selenoprotein, putative CDG62_03615 618722fabd6ebd6860e1f9ca5783153d 278 Pfam PF16956 Putative general bacterial porin 5 277 1.0E-23 T 23-10-2018 IPR031593 Putative general bacterial porin CDG62_12125 5726f9bd20b8d59b27b42aac308ad9fd 88 Pfam PF05488 PAAR motif 9 77 3.3E-13 T 23-10-2018 IPR008727 PAAR motif CDG62_12125 5726f9bd20b8d59b27b42aac308ad9fd 88 Gene3D G3DSA:2.60.200.60 17 86 1.4E-5 T 23-10-2018 CDG62_00300 332b774b49e2cdccff9501e788c4e63a 316 Pfam PF04404 ERF superfamily 53 189 9.2E-6 T 23-10-2018 IPR007499 Essential recombination function protein CDG62_15710 d9b0a5d2dc9eb05a0ac6ab47f783b098 249 SUPERFAMILY SSF52200 7 108 3.14E-6 T 23-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily CDG62_15710 d9b0a5d2dc9eb05a0ac6ab47f783b098 249 Pfam PF13676 TIR domain 7 117 1.6E-12 T 23-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 CDG62_09935 1a80b833a888d3aaf02ed87772e08b42 213 Pfam PF01810 LysE type translocator 14 206 1.0E-30 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_04370 8880dbb381128ab1e747b3c32ff236df 255 Pfam PF01925 Sulfite exporter TauE/SafE 10 248 3.1E-36 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDG62_07140 ab96da89c3e30d5c0171ec17eecf45ec 197 Pfam PF13430 Domain of unknown function (DUF4112) 22 121 3.6E-21 T 23-10-2018 IPR025187 Protein of unknown function DUF4112 CDG62_07040 0ca8b769f0ecef5423d816885f617a6d 179 Gene3D G3DSA:2.60.40.1190 26 178 5.1E-8 T 23-10-2018 CDG62_04930 464863665eeee7330d7c0dd4f84bf03d 311 Pfam PF00892 EamA-like transporter family 15 143 2.3E-12 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_04930 464863665eeee7330d7c0dd4f84bf03d 311 Pfam PF00892 EamA-like transporter family 158 294 7.8E-22 T 23-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CDG62_04930 464863665eeee7330d7c0dd4f84bf03d 311 SUPERFAMILY SSF103481 194 297 2.88E-14 T 23-10-2018 CDG62_04930 464863665eeee7330d7c0dd4f84bf03d 311 SUPERFAMILY SSF103481 45 146 1.57E-12 T 23-10-2018 CDG62_00820 7d758026849646d53d30e6c17fd15a86 1226 SUPERFAMILY SSF52540 61 177 5.92E-5 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_00820 7d758026849646d53d30e6c17fd15a86 1226 SUPERFAMILY SSF52540 39 306 8.97E-5 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_12140 9debb83e7f99cfb1618f528ff0565c1a 371 Pfam PF12698 ABC-2 family transporter protein 30 363 2.3E-45 T 23-10-2018 CDG62_14550 35582e572497c12bf83e8a36395caed6 197 Pfam PF01810 LysE type translocator 12 191 8.6E-15 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_03590 27197ec163090d1cba53ace657889e4a 121 Pfam PF03692 Putative zinc- or iron-chelating domain 10 90 1.2E-6 T 23-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CDG62_07540 24f9e1c2d05dedda14f20ea9e19a30b9 233 Pfam PF03591 AzlC protein 26 161 2.0E-34 T 23-10-2018 IPR011606 Branched-chain amino acid transport, permease CDG62_16960 f2de65a2ea3bd7e2d9a12709a9154e04 152 Pfam PF03724 META domain 36 145 6.3E-27 T 23-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ CDG62_16960 f2de65a2ea3bd7e2d9a12709a9154e04 152 Gene3D G3DSA:2.40.128.270 33 148 1.3E-24 T 23-10-2018 IPR038670 HslJ-like superfamily CDG62_11410 e7facc60949970c8546db3a1c01af023 389 Pfam PF00487 Fatty acid desaturase 74 341 1.0E-25 T 23-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CDG62_18650 678df531d2dac5b119423ba9ae4fdcda 138 Pfam PF07681 DoxX 22 101 1.8E-17 T 23-10-2018 IPR032808 DoxX family CDG62_13110 18b43ef3fc59c613ebeb12e2dce12cb8 134 Pfam PF11304 Protein of unknown function (DUF3106) 38 89 8.7E-7 T 23-10-2018 IPR021455 Protein of unknown function DUF3106 CDG62_11600 ef18f96919190680cb6eba1ec702c7c2 253 Pfam PF12261 Thermostable hemolysin 62 229 1.2E-48 T 23-10-2018 IPR022050 Thermostable hemolysin CDG62_11355 d8a3c0f1655a63394c997fb6454383ee 222 Pfam PF06912 Protein of unknown function (DUF1275) 14 210 4.5E-29 T 23-10-2018 IPR010699 Protein of unknown function DUF1275 CDG62_06545 fa42e493a2812d13ea9c2a8bb01b8713 220 Gene3D G3DSA:3.30.40.60 8 103 8.0E-6 T 23-10-2018 CDG62_14395 32599f2d96bad189995853e2b67e360d 153 Pfam PF11042 Protein of unknown function (DUF2750) 24 123 1.7E-18 T 23-10-2018 IPR021284 Protein of unknown function DUF2750 CDG62_17210 04298f27e7433275fb490cbe106bd8b7 204 Pfam PF01810 LysE type translocator 16 200 7.1E-23 T 23-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CDG62_06550 4bd12b3c324ac62c7025a3c5585a1c20 485 Gene3D G3DSA:3.40.50.300 174 404 2.3E-14 T 23-10-2018 CDG62_06550 4bd12b3c324ac62c7025a3c5585a1c20 485 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 22 380 2.3E-15 T 23-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CDG62_06550 4bd12b3c324ac62c7025a3c5585a1c20 485 SUPERFAMILY SSF52540 17 391 9.83E-16 T 23-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDG62_02420 53aa73705eaede766031ef72bdb6b305 153 Pfam PF00816 H-NS histone family 29 129 2.1E-5 T 23-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CDG62_18225 ad553b3b69a41cbb665b1abbb032bc64 182 Pfam PF09335 SNARE associated Golgi protein 43 168 2.5E-20 T 23-10-2018 IPR032816 SNARE associated Golgi protein CDG62_09485 7bad77f11f5ca99e70bc78ab27c247a3 231 Pfam PF04404 ERF superfamily 4 151 5.8E-27 T 23-10-2018 IPR007499 Essential recombination function protein CDG62_01370 97ced1efb2a07d64bf1d531fd996f0f2 670 Pfam PF01551 Peptidase family M23 88 188 9.7E-8 T 23-10-2018 IPR016047 Peptidase M23 CDG62_01370 97ced1efb2a07d64bf1d531fd996f0f2 670 SUPERFAMILY SSF51261 52 187 1.31E-6 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG62_01370 97ced1efb2a07d64bf1d531fd996f0f2 670 Gene3D G3DSA:2.70.70.10 28 198 2.4E-11 T 23-10-2018 IPR011055 Duplicated hybrid motif CDG62_09655 3ec94bf7d8c46334949cd4466c8f7a49 182 Pfam PF05069 Phage virion morphogenesis family 14 177 6.1E-17 T 23-10-2018 IPR006522 Phage virion morphogensis protein CDG62_18905 9937e639cf078d20c4c18069730339ce 428 Pfam PF13440 Polysaccharide biosynthesis protein 43 334 5.5E-16 T 23-10-2018 CDG62_06360 8edcf9a4ef75042602e9a731c09d7165 220 Pfam PF04315 Elongation factor P hydroxylase 53 214 2.2E-61 T 23-10-2018 IPR007411 Elongation factor P hydroxylase CDG62_06760 24f689acc0fcbf574dd3bca0c1118aaa 200 Pfam PF14345 GDYXXLXY protein 14 175 2.8E-19 T 23-10-2018 IPR025833 GDYXXLXY protein CDG62_18560 86ceb74f2e0f1104fbbe621697a50761 242 Gene3D G3DSA:2.30.30.40 29 92 1.4E-5 T 23-10-2018 CDG62_04480 934de91efff87252c348af64aa64bd79 69 Pfam PF08410 Domain of unknown function (DUF1737) 1 51 3.6E-22 T 23-10-2018 IPR013619 Domain of unknown function DUF1737 CDG62_09615 eb995b6ff3091e39e450d5b58a4477ce 495 Pfam PF06074 Protein of unknown function (DUF935) 59 489 1.3E-53 T 23-10-2018 IPR009279 Protein of unknown function DUF935 CDG62_04420 789797258c1f2556af90f0c8e57f7dde 99 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 6 89 2.7E-32 T 23-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane CDG62_04420 789797258c1f2556af90f0c8e57f7dde 99 Pfam PF12823 Domain of unknown function (DUF3817) 4 91 9.8E-26 T 23-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane CDG62_10640 d362d498f909402b4c113063b210438c 155 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 33 139 2.3E-31 T 23-10-2018 IPR008769 Poly granule associated CDG62_00605 eab9b5636a748b8ba36b5f8d12038bb6 94 ProDom PD029395 PLASMID MOBILIZATION C MOBILITY CONJUGATION MOBC MOBS ORF94 PROBABLE ORF110 50 91 2.0E-4 T 23-10-2018 CDG62_00915 21e984325be68fb8c129d78a04b1f04f 1151 SUPERFAMILY SSF56349 638 869 1.4E-7 T 23-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CDG62_06740 b0ee317fe5adf557f92289a3d08e7f67 161 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 2.0E-14 T 23-10-2018 IPR010710 Protein of unknown function DUF1289 CDG62_10370 162a2941ed8cbc926ef0d3516cbead14 144 Pfam PF05232 Chlorhexidine efflux transporter 70 132 4.9E-21 T 23-10-2018 IPR007896 Chlorhexidine efflux transporter CDG62_10370 162a2941ed8cbc926ef0d3516cbead14 144 Pfam PF05232 Chlorhexidine efflux transporter 5 64 4.4E-17 T 23-10-2018 IPR007896 Chlorhexidine efflux transporter CDG62_06155 dc20fe9096e91c6610a8f45c86d5ba5e 351 Pfam PF06674 Protein of unknown function (DUF1176) 33 345 3.0E-84 T 23-10-2018 IPR009560 Protein of unknown function DUF1176 CDG62_13685 9ad01317d2a0bd2afb72cb7460ba2287 218 Pfam PF09997 Predicted membrane protein (DUF2238) 54 203 1.1E-43 T 23-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 CDG62_01730 e5ddfff3e7b23c1bfb12887988914b85 48 SUPERFAMILY SSF48295 2 34 3.92E-5 T 23-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CDG62_14200 775fe613c8460859498b0ecf77482ec8 539 Pfam PF01384 Phosphate transporter family 81 528 5.9E-86 T 23-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CDG62_17380 3f889c9707746653aab6d286110e52ae 430 SUPERFAMILY SSF53474 47 220 2.3E-5 T 23-10-2018 IPR029058 Alpha/Beta hydrolase fold CDG62_18655 915abcd7466c9b8c38a1fd468dc18a2b 214 Pfam PF09335 SNARE associated Golgi protein 45 170 3.0E-24 T 23-10-2018 IPR032816 SNARE associated Golgi protein CDG62_06125 7e551da1ba415da5e6f0344e3f11e375 116 Pfam PF04343 Protein of unknown function, DUF488 5 112 8.4E-29 T 23-10-2018 IPR007438 Protein of unknown function DUF488 CDG62_18600 2941aec56c902edd92ca9b1afd8765a2 94 Pfam PF11391 Protein of unknown function (DUF2798) 26 81 2.4E-19 T 23-10-2018 IPR021529 Protein of unknown function DUF2798 CDG62_08845 7b4fc02293c3e89793a65247f0448d75 161 SUPERFAMILY SSF69318 41 100 5.75E-5 T 23-10-2018 CDG62_04210 98a1090bf387c37a375bc86ead564357 279 Gene3D G3DSA:3.30.70.1070 84 184 5.9E-11 T 23-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 CDG62_13600 2c934da0316ad42e21616787a22f1e42 151 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 70 135 1.2E-8 T 23-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass CDG62_11795 fe7181c969a393015030570215c537bd 298 Pfam PF01925 Sulfite exporter TauE/SafE 7 268 2.9E-48 T 23-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CDG62_08865 403bd970f39649b4028f8987c1e64237 1505 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1158 1505 2.9E-40 T 23-10-2018 IPR007452 Translocation and assembly module TamB CDG62_07630 bf023b4b57ee22b7750fc9da7d21e2aa 137 Pfam PF06127 Protein of unknown function (DUF962) 41 134 2.1E-35 T 23-10-2018 IPR009305 Protein of unknown function DUF962 CDG62_07985 3a4a2f13159335f097ace1b4393b3655 248 Pfam PF03591 AzlC protein 29 175 3.6E-34 T 23-10-2018 IPR011606 Branched-chain amino acid transport, permease CDG62_10760 82c939ec6b3edd61e374e492ad5f955c 126 Pfam PF11042 Protein of unknown function (DUF2750) 22 100 1.1E-13 T 23-10-2018 IPR021284 Protein of unknown function DUF2750 CDG62_02865 483e5047cc1965c0ed82f24675445175 108 Gene3D G3DSA:3.20.20.140 2 97 1.9E-10 T 23-10-2018 CDG62_10745 a76cc173edc3f3c7489de178037bae6d 395 Pfam PF05762 VWA domain containing CoxE-like protein 190 277 2.2E-8 T 23-10-2018 IPR008912 Uncharacterised protein family CoxE-like CDG62_04960 a80b51ec272a28a00366e70f2dcbc329 236 Pfam PF11306 Protein of unknown function (DUF3108) 28 231 2.8E-24 T 23-10-2018 IPR021457 Protein of unknown function DUF3108